Query 016519
Match_columns 388
No_of_seqs 170 out of 2278
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 14:55:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016519.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016519hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xve_A Flavin-containing monoo 100.0 8.5E-42 2.9E-46 326.1 31.1 311 8-386 3-341 (464)
2 4a9w_A Monooxygenase; baeyer-v 100.0 1.1E-41 3.9E-46 315.3 28.6 341 7-386 3-352 (357)
3 3gwf_A Cyclohexanone monooxyge 100.0 3.3E-40 1.1E-44 319.6 28.5 354 7-383 8-454 (540)
4 3uox_A Otemo; baeyer-villiger 100.0 6.1E-40 2.1E-44 318.0 25.6 356 6-383 8-463 (545)
5 1w4x_A Phenylacetone monooxyge 100.0 2.1E-39 7.3E-44 315.6 28.1 357 6-384 15-464 (542)
6 4ap3_A Steroid monooxygenase; 100.0 5.2E-39 1.8E-43 311.7 29.3 355 7-383 21-468 (549)
7 2gv8_A Monooxygenase; FMO, FAD 100.0 7.2E-39 2.5E-43 305.3 27.9 309 6-385 5-361 (447)
8 3lzw_A Ferredoxin--NADP reduct 100.0 4.3E-38 1.5E-42 288.5 20.9 296 1-387 1-316 (332)
9 3fbs_A Oxidoreductase; structu 100.0 4.3E-37 1.5E-41 277.4 21.8 281 8-386 3-292 (297)
10 3f8d_A Thioredoxin reductase ( 100.0 6.6E-37 2.2E-41 279.5 22.6 284 7-385 15-316 (323)
11 2q7v_A Thioredoxin reductase; 100.0 1.5E-36 5.3E-41 277.5 25.0 287 7-385 8-311 (325)
12 3itj_A Thioredoxin reductase 1 100.0 2.3E-37 8E-42 284.3 19.7 293 6-387 21-336 (338)
13 2q0l_A TRXR, thioredoxin reduc 100.0 1.2E-36 4.2E-41 276.4 23.6 286 8-386 2-309 (311)
14 2zbw_A Thioredoxin reductase; 100.0 1.1E-36 3.6E-41 279.8 22.1 296 7-387 5-318 (335)
15 4gcm_A TRXR, thioredoxin reduc 100.0 3.5E-36 1.2E-40 273.6 20.9 285 6-386 5-306 (312)
16 1fl2_A Alkyl hydroperoxide red 100.0 7.5E-36 2.6E-40 271.1 22.8 287 7-386 1-305 (310)
17 3r9u_A Thioredoxin reductase; 100.0 6.9E-36 2.3E-40 271.8 22.1 290 6-386 3-312 (315)
18 3ab1_A Ferredoxin--NADP reduct 100.0 7.9E-36 2.7E-40 276.7 22.9 297 7-387 14-329 (360)
19 2a87_A TRXR, TR, thioredoxin r 100.0 1E-35 3.4E-40 273.3 21.9 286 6-385 13-315 (335)
20 3cty_A Thioredoxin reductase; 100.0 1.4E-35 4.9E-40 270.4 22.1 286 7-387 16-317 (319)
21 4a5l_A Thioredoxin reductase; 100.0 7.3E-36 2.5E-40 271.7 20.0 291 7-386 4-312 (314)
22 1vdc_A NTR, NADPH dependent th 100.0 3.1E-35 1.1E-39 269.7 22.0 286 7-385 8-322 (333)
23 3d1c_A Flavin-containing putat 100.0 1.6E-34 5.6E-39 268.7 26.8 309 7-386 4-339 (369)
24 1trb_A Thioredoxin reductase; 100.0 2.8E-35 9.6E-40 268.5 20.0 290 7-387 5-315 (320)
25 4fk1_A Putative thioredoxin re 100.0 5.7E-35 2E-39 264.5 19.7 284 7-386 6-300 (304)
26 1hyu_A AHPF, alkyl hydroperoxi 100.0 7.3E-34 2.5E-38 275.0 27.0 287 6-385 211-515 (521)
27 4eqs_A Coenzyme A disulfide re 100.0 4.2E-34 1.4E-38 270.8 17.4 291 9-384 2-311 (437)
28 3oc4_A Oxidoreductase, pyridin 100.0 2.9E-33 9.8E-38 266.9 22.8 286 8-384 3-314 (452)
29 2hqm_A GR, grase, glutathione 100.0 3.8E-34 1.3E-38 274.7 15.5 303 6-384 10-347 (479)
30 2bc0_A NADH oxidase; flavoprot 100.0 4.4E-34 1.5E-38 275.1 14.6 292 6-384 34-361 (490)
31 1zmd_A Dihydrolipoyl dehydroge 100.0 1.7E-33 5.8E-38 270.2 18.5 308 5-384 4-345 (474)
32 3urh_A Dihydrolipoyl dehydroge 100.0 5.8E-34 2E-38 274.5 14.8 305 7-384 25-363 (491)
33 1dxl_A Dihydrolipoamide dehydr 100.0 2.7E-33 9.2E-38 268.7 19.2 307 6-384 5-342 (470)
34 1mo9_A ORF3; nucleotide bindin 100.0 3E-33 1E-37 271.1 19.3 304 6-384 42-378 (523)
35 3l8k_A Dihydrolipoyl dehydroge 100.0 3.5E-33 1.2E-37 267.2 19.3 295 7-384 4-333 (466)
36 2wpf_A Trypanothione reductase 100.0 5.9E-33 2E-37 267.1 20.3 305 7-383 7-354 (495)
37 3iwa_A FAD-dependent pyridine 100.0 1.1E-33 3.7E-38 271.4 15.0 297 7-384 3-329 (472)
38 3dgz_A Thioredoxin reductase 2 100.0 2.6E-33 8.9E-38 269.7 17.2 305 6-384 5-352 (488)
39 3qfa_A Thioredoxin reductase 1 100.0 6.6E-33 2.2E-37 268.3 20.0 305 6-384 31-380 (519)
40 1xhc_A NADH oxidase /nitrite r 100.0 9.7E-35 3.3E-39 269.1 6.6 275 8-384 9-297 (367)
41 2qae_A Lipoamide, dihydrolipoy 100.0 8E-33 2.7E-37 265.1 20.0 306 7-384 2-340 (468)
42 3ics_A Coenzyme A-disulfide re 100.0 1.4E-33 5E-38 277.7 15.0 292 6-383 35-352 (588)
43 3lad_A Dihydrolipoamide dehydr 100.0 2.1E-33 7E-38 269.8 15.5 307 6-385 2-344 (476)
44 3klj_A NAD(FAD)-dependent dehy 100.0 9.9E-35 3.4E-39 270.3 6.0 274 5-384 7-294 (385)
45 1xdi_A RV3303C-LPDA; reductase 100.0 2.5E-33 8.7E-38 270.5 16.0 309 7-384 2-342 (499)
46 1ebd_A E3BD, dihydrolipoamide 100.0 1.5E-33 5E-38 269.2 14.2 302 7-384 3-333 (455)
47 3kd9_A Coenzyme A disulfide re 100.0 6.6E-33 2.2E-37 264.3 18.4 285 7-384 3-315 (449)
48 3lxd_A FAD-dependent pyridine 100.0 2.8E-33 9.6E-38 264.2 15.4 285 6-384 8-321 (415)
49 2gqw_A Ferredoxin reductase; f 100.0 6.5E-33 2.2E-37 260.8 17.7 286 1-385 1-309 (408)
50 3dk9_A Grase, GR, glutathione 100.0 5.3E-33 1.8E-37 267.1 16.7 299 7-384 20-356 (478)
51 1ges_A Glutathione reductase; 100.0 3.7E-33 1.3E-37 265.7 15.5 296 7-383 4-327 (450)
52 2a8x_A Dihydrolipoyl dehydroge 100.0 3.2E-33 1.1E-37 267.5 15.0 301 7-383 3-333 (464)
53 2r9z_A Glutathione amide reduc 100.0 1E-32 3.5E-37 263.6 18.3 296 7-383 4-326 (463)
54 3ic9_A Dihydrolipoamide dehydr 100.0 2.3E-33 7.7E-38 270.0 13.8 302 7-384 8-338 (492)
55 1ojt_A Surface protein; redox- 100.0 6.7E-32 2.3E-36 259.4 23.6 307 7-384 6-349 (482)
56 4dna_A Probable glutathione re 100.0 7.5E-33 2.6E-37 264.8 16.9 297 7-384 5-331 (463)
57 4b63_A L-ornithine N5 monooxyg 100.0 1.3E-31 4.5E-36 257.8 25.6 337 6-363 38-457 (501)
58 3ntd_A FAD-dependent pyridine 100.0 1E-33 3.4E-38 277.9 11.0 290 8-384 2-338 (565)
59 1onf_A GR, grase, glutathione 100.0 3.5E-33 1.2E-37 269.3 14.5 298 7-383 2-370 (500)
60 1v59_A Dihydrolipoamide dehydr 100.0 3.3E-33 1.1E-37 268.6 14.2 306 7-384 5-350 (478)
61 1zk7_A HGII, reductase, mercur 100.0 7.6E-33 2.6E-37 265.2 16.6 302 7-384 4-334 (467)
62 3ef6_A Toluene 1,2-dioxygenase 100.0 6.3E-33 2.1E-37 261.2 15.5 282 8-384 3-309 (410)
63 1fec_A Trypanothione reductase 100.0 4.6E-32 1.6E-36 260.7 20.9 304 7-383 3-350 (490)
64 3dgh_A TRXR-1, thioredoxin red 100.0 2.1E-32 7.1E-37 263.1 17.9 303 6-384 8-352 (483)
65 2cdu_A NADPH oxidase; flavoenz 100.0 9.9E-33 3.4E-37 263.3 15.4 291 8-384 1-317 (452)
66 2eq6_A Pyruvate dehydrogenase 100.0 3.1E-32 1.1E-36 260.4 18.0 297 7-384 6-334 (464)
67 3o0h_A Glutathione reductase; 100.0 5.8E-33 2E-37 267.0 12.8 298 7-384 26-351 (484)
68 2yqu_A 2-oxoglutarate dehydrog 100.0 1.8E-32 6.1E-37 261.7 15.7 300 8-384 2-327 (455)
69 2vdc_G Glutamate synthase [NAD 100.0 7.3E-33 2.5E-37 262.7 12.4 275 6-385 121-443 (456)
70 3s5w_A L-ornithine 5-monooxyge 100.0 3.2E-31 1.1E-35 253.9 23.6 347 7-382 30-445 (463)
71 3fg2_P Putative rubredoxin red 100.0 8.8E-33 3E-37 259.8 12.2 282 8-384 2-310 (404)
72 4b1b_A TRXR, thioredoxin reduc 100.0 3.3E-33 1.1E-37 269.1 9.3 307 7-384 42-384 (542)
73 1nhp_A NADH peroxidase; oxidor 100.0 3E-32 1E-36 259.6 15.2 288 8-384 1-316 (447)
74 3cgb_A Pyridine nucleotide-dis 100.0 3.7E-32 1.3E-36 261.0 14.9 289 7-384 36-353 (480)
75 2v3a_A Rubredoxin reductase; a 100.0 6.9E-32 2.4E-36 252.1 16.3 282 7-384 4-306 (384)
76 1lvl_A Dihydrolipoamide dehydr 100.0 9.4E-32 3.2E-36 256.7 16.3 296 7-384 5-330 (458)
77 1q1r_A Putidaredoxin reductase 100.0 9E-32 3.1E-36 254.7 14.1 286 7-384 4-319 (431)
78 4g6h_A Rotenone-insensitive NA 100.0 2.4E-32 8.3E-37 262.4 10.1 301 6-384 41-399 (502)
79 2x8g_A Thioredoxin glutathione 100.0 1.2E-30 4E-35 257.3 17.8 303 6-384 106-459 (598)
80 3sx6_A Sulfide-quinone reducta 100.0 1.9E-30 6.4E-35 246.4 13.4 289 7-386 4-344 (437)
81 3h8l_A NADH oxidase; membrane 100.0 1E-30 3.6E-35 246.3 11.5 285 8-385 2-335 (409)
82 1lqt_A FPRA; NADP+ derivative, 100.0 7.6E-30 2.6E-34 242.3 12.8 298 7-385 3-386 (456)
83 1cjc_A Protein (adrenodoxin re 100.0 1.7E-29 5.9E-34 240.2 12.3 296 6-385 5-394 (460)
84 3k30_A Histamine dehydrogenase 100.0 3.5E-30 1.2E-34 257.4 7.8 269 6-387 390-676 (690)
85 1m6i_A Programmed cell death p 100.0 2.1E-30 7E-35 249.3 5.4 303 6-385 10-353 (493)
86 1gte_A Dihydropyrimidine dehyd 100.0 1.8E-28 6.1E-33 253.9 13.9 277 7-385 187-507 (1025)
87 1o94_A Tmadh, trimethylamine d 100.0 9.5E-29 3.3E-33 247.9 10.9 278 6-386 388-700 (729)
88 2gag_A Heterotetrameric sarcos 100.0 6.7E-28 2.3E-32 248.0 16.3 282 7-386 128-444 (965)
89 3h28_A Sulfide-quinone reducta 99.9 8.6E-29 3E-33 234.5 4.5 288 8-386 3-333 (430)
90 1ps9_A 2,4-dienoyl-COA reducta 99.9 2.2E-27 7.5E-32 236.5 13.9 282 6-381 372-671 (671)
91 3hyw_A Sulfide-quinone reducta 99.9 2.6E-28 9E-33 230.9 6.1 293 8-386 3-333 (430)
92 3vrd_B FCCB subunit, flavocyto 99.9 6.8E-27 2.3E-31 219.7 12.9 284 8-385 3-323 (401)
93 1y56_A Hypothetical protein PH 99.9 2.7E-26 9.4E-31 220.6 9.7 254 7-385 108-376 (493)
94 3fpz_A Thiazole biosynthetic e 99.7 4.4E-20 1.5E-24 168.2 -14.0 150 7-219 65-216 (326)
95 2ywl_A Thioredoxin reductase r 99.7 1.8E-16 6.2E-21 131.4 9.0 159 188-385 3-170 (180)
96 2e5v_A L-aspartate oxidase; ar 99.5 8.4E-16 2.9E-20 146.6 2.4 187 9-219 1-242 (472)
97 2gqf_A Hypothetical protein HI 99.5 8.6E-15 2.9E-19 136.6 6.3 135 7-152 4-171 (401)
98 3v76_A Flavoprotein; structura 99.4 1.9E-12 6.5E-17 121.2 12.5 134 6-153 26-191 (417)
99 2ywl_A Thioredoxin reductase r 99.3 1.3E-11 4.4E-16 101.9 13.3 111 8-153 2-112 (180)
100 3oz2_A Digeranylgeranylglycero 99.3 8.4E-12 2.9E-16 116.2 11.6 135 7-149 4-162 (397)
101 3cgv_A Geranylgeranyl reductas 99.3 9.6E-12 3.3E-16 116.0 11.8 134 7-149 4-162 (397)
102 3nix_A Flavoprotein/dehydrogen 99.3 1.6E-11 5.5E-16 115.5 13.4 135 7-149 5-166 (421)
103 2cul_A Glucose-inhibited divis 99.3 2.6E-12 8.9E-17 110.7 6.9 172 187-386 4-232 (232)
104 2cul_A Glucose-inhibited divis 99.3 1.3E-11 4.3E-16 106.4 10.9 124 7-151 3-127 (232)
105 3rp8_A Flavoprotein monooxygen 99.3 1E-11 3.5E-16 116.4 10.5 132 6-151 22-183 (407)
106 3fmw_A Oxygenase; mithramycin, 99.3 2.2E-11 7.5E-16 118.6 12.3 135 6-149 48-207 (570)
107 2qa1_A PGAE, polyketide oxygen 99.3 2.7E-11 9.1E-16 116.3 12.6 136 5-149 9-165 (500)
108 3ces_A MNMG, tRNA uridine 5-ca 99.3 6.4E-12 2.2E-16 121.9 8.3 169 6-217 27-221 (651)
109 2bry_A NEDD9 interacting prote 99.3 4.9E-12 1.7E-16 121.4 7.0 139 6-151 91-232 (497)
110 1yvv_A Amine oxidase, flavin-c 99.3 2.8E-11 9.6E-16 110.2 11.3 130 7-149 2-162 (336)
111 2qa2_A CABE, polyketide oxygen 99.2 3.7E-11 1.3E-15 115.3 12.4 136 5-149 10-166 (499)
112 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 1.4E-11 4.7E-16 112.7 8.3 128 8-147 2-163 (342)
113 3e1t_A Halogenase; flavoprotei 99.2 3.3E-11 1.1E-15 116.2 11.1 140 1-150 1-173 (512)
114 2i0z_A NAD(FAD)-utilizing dehy 99.2 2.1E-11 7E-16 115.6 9.3 134 6-151 25-193 (447)
115 3ihg_A RDME; flavoenzyme, anth 99.2 8.6E-11 2.9E-15 114.1 13.1 134 6-149 4-183 (535)
116 2gmh_A Electron transfer flavo 99.2 1.4E-10 4.6E-15 113.5 14.4 142 6-149 34-217 (584)
117 2x3n_A Probable FAD-dependent 99.2 6.5E-11 2.2E-15 110.6 10.6 131 7-149 6-166 (399)
118 2xdo_A TETX2 protein; tetracyc 99.2 1.3E-10 4.6E-15 108.4 12.2 130 7-151 26-184 (398)
119 2zxi_A TRNA uridine 5-carboxym 99.2 8E-11 2.8E-15 113.8 10.6 171 6-219 26-222 (637)
120 3dje_A Fructosyl amine: oxygen 99.2 1.4E-10 4.7E-15 109.8 12.1 62 79-152 159-224 (438)
121 3nlc_A Uncharacterized protein 99.2 2.8E-10 9.6E-15 109.5 13.8 132 7-149 107-277 (549)
122 3alj_A 2-methyl-3-hydroxypyrid 99.2 8.5E-11 2.9E-15 109.0 9.9 125 7-149 11-160 (379)
123 2dkh_A 3-hydroxybenzoate hydro 99.2 3.1E-10 1.1E-14 112.3 14.4 141 6-150 31-212 (639)
124 1k0i_A P-hydroxybenzoate hydro 99.1 6.6E-11 2.2E-15 110.4 8.3 135 8-151 3-165 (394)
125 3dme_A Conserved exported prot 99.1 2.4E-10 8.1E-15 105.4 11.9 62 79-149 148-209 (369)
126 2vou_A 2,6-dihydroxypyridine h 99.1 3.9E-10 1.3E-14 105.2 12.5 129 7-150 5-154 (397)
127 3i3l_A Alkylhalidase CMLS; fla 99.1 2.8E-10 9.6E-15 111.0 11.8 135 7-149 23-188 (591)
128 3cp8_A TRNA uridine 5-carboxym 99.1 8.9E-11 3E-15 113.9 7.8 174 6-219 20-217 (641)
129 3atr_A Conserved archaeal prot 99.1 1.6E-10 5.5E-15 109.7 9.4 134 7-150 6-163 (453)
130 1rp0_A ARA6, thiazole biosynth 99.1 7.3E-10 2.5E-14 98.4 12.8 134 7-147 39-189 (284)
131 3c96_A Flavin-containing monoo 99.1 1E-09 3.4E-14 102.9 14.4 136 7-150 4-170 (410)
132 2uzz_A N-methyl-L-tryptophan o 99.1 4.3E-10 1.5E-14 103.9 11.6 62 80-154 148-209 (372)
133 2r0c_A REBC; flavin adenine di 99.1 8.6E-10 2.9E-14 107.2 14.2 134 7-150 26-197 (549)
134 1y0p_A Fumarate reductase flav 99.1 8E-10 2.8E-14 108.0 13.3 138 7-150 126-318 (571)
135 1ryi_A Glycine oxidase; flavop 99.1 7.1E-10 2.4E-14 102.8 12.0 61 77-150 160-220 (382)
136 4hb9_A Similarities with proba 99.1 6.2E-10 2.1E-14 104.1 11.5 129 8-150 2-167 (412)
137 3ps9_A TRNA 5-methylaminomethy 99.1 7E-10 2.4E-14 110.6 12.4 60 79-150 415-474 (676)
138 3jsk_A Cypbp37 protein; octame 99.1 2.5E-10 8.5E-15 102.6 8.0 104 7-113 79-191 (344)
139 1qo8_A Flavocytochrome C3 fuma 99.1 8.3E-10 2.8E-14 107.8 12.3 139 6-150 120-313 (566)
140 3pvc_A TRNA 5-methylaminomethy 99.0 2.1E-09 7.1E-14 107.4 14.1 60 79-150 410-470 (689)
141 1y56_B Sarcosine oxidase; dehy 99.0 1.2E-09 4.2E-14 101.2 11.2 59 78-149 146-205 (382)
142 2gf3_A MSOX, monomeric sarcosi 99.0 1.7E-09 5.7E-14 100.5 12.1 57 80-149 149-205 (389)
143 1pn0_A Phenol 2-monooxygenase; 99.0 3.9E-09 1.3E-13 104.7 14.8 140 7-150 8-231 (665)
144 3nyc_A D-arginine dehydrogenas 99.0 5.3E-10 1.8E-14 103.5 8.0 58 79-149 152-209 (381)
145 2oln_A NIKD protein; flavoprot 99.0 1.5E-09 5.2E-14 101.2 11.0 56 81-149 153-208 (397)
146 2gag_B Heterotetrameric sarcos 99.0 2.3E-09 8E-14 100.1 11.2 60 78-149 171-230 (405)
147 3da1_A Glycerol-3-phosphate de 98.9 8.9E-09 3E-13 100.1 14.5 65 79-149 168-232 (561)
148 2aqj_A Tryptophan halogenase, 98.9 1.4E-09 4.9E-14 105.5 8.7 62 78-150 162-223 (538)
149 4at0_A 3-ketosteroid-delta4-5a 98.9 1.8E-08 6.3E-13 97.0 15.6 38 7-44 41-78 (510)
150 3c4n_A Uncharacterized protein 98.9 1.2E-09 4.2E-14 102.1 6.3 36 7-42 36-73 (405)
151 2qcu_A Aerobic glycerol-3-phos 98.9 7.9E-09 2.7E-13 99.3 11.2 64 79-149 147-210 (501)
152 3kkj_A Amine oxidase, flavin-c 98.9 2.1E-09 7.2E-14 94.7 6.7 41 8-48 3-43 (336)
153 2gjc_A Thiazole biosynthetic e 98.9 1.2E-08 4E-13 91.3 11.3 105 7-113 65-177 (326)
154 1d4d_A Flavocytochrome C fumar 98.9 2E-08 6.8E-13 98.0 13.9 138 7-150 126-318 (572)
155 3k7m_X 6-hydroxy-L-nicotine ox 98.9 6.5E-09 2.2E-13 98.0 9.6 37 8-44 2-38 (431)
156 2e4g_A Tryptophan halogenase; 98.8 6.1E-09 2.1E-13 101.2 9.3 62 78-150 191-253 (550)
157 2weu_A Tryptophan 5-halogenase 98.8 1.3E-08 4.5E-13 98.1 11.2 63 78-151 170-232 (511)
158 2pyx_A Tryptophan halogenase; 98.8 1E-08 3.4E-13 99.2 10.2 62 78-150 172-234 (526)
159 2wdq_A Succinate dehydrogenase 98.8 3.3E-08 1.1E-12 96.6 13.7 43 1-43 1-43 (588)
160 3ka7_A Oxidoreductase; structu 98.8 2.2E-08 7.4E-13 94.2 10.0 38 8-45 1-38 (425)
161 2yqu_A 2-oxoglutarate dehydrog 98.8 5.5E-08 1.9E-12 92.3 12.8 102 7-155 167-268 (455)
162 3nrn_A Uncharacterized protein 98.8 1.5E-08 5.2E-13 95.2 8.7 38 8-45 1-38 (421)
163 1pj5_A N,N-dimethylglycine oxi 98.8 2.9E-08 9.8E-13 101.3 11.2 58 79-149 149-207 (830)
164 3i6d_A Protoporphyrinogen oxid 98.7 3.1E-08 1.1E-12 94.3 9.6 38 7-44 5-48 (470)
165 2v3a_A Rubredoxin reductase; a 98.7 1E-07 3.4E-12 88.4 12.3 101 7-153 145-245 (384)
166 2rgh_A Alpha-glycerophosphate 98.7 8.8E-08 3E-12 93.3 11.4 39 6-44 31-69 (571)
167 3c4a_A Probable tryptophan hyd 98.7 7.8E-09 2.7E-13 95.8 3.5 120 8-150 1-144 (381)
168 2eq6_A Pyruvate dehydrogenase 98.7 1.7E-07 5.9E-12 89.1 12.8 104 7-155 169-275 (464)
169 1chu_A Protein (L-aspartate ox 98.6 7.4E-08 2.5E-12 93.2 9.6 38 6-44 7-44 (540)
170 1kf6_A Fumarate reductase flav 98.6 4.2E-07 1.4E-11 89.0 14.3 36 7-42 5-42 (602)
171 1nhp_A NADH peroxidase; oxidor 98.6 1.5E-07 5.3E-12 89.0 10.8 103 6-155 148-250 (447)
172 1rp0_A ARA6, thiazole biosynth 98.6 2E-08 7E-13 89.0 4.3 189 187-387 40-276 (284)
173 1ebd_A E3BD, dihydrolipoamide 98.6 3.9E-07 1.3E-11 86.4 13.0 104 7-154 170-273 (455)
174 2h88_A Succinate dehydrogenase 98.6 4.1E-07 1.4E-11 89.1 13.2 37 7-43 18-54 (621)
175 3axb_A Putative oxidoreductase 98.6 1.3E-07 4.3E-12 89.6 9.2 33 7-39 23-56 (448)
176 2r9z_A Glutathione amide reduc 98.6 3.4E-07 1.2E-11 86.9 12.0 101 7-154 166-267 (463)
177 4gut_A Lysine-specific histone 98.6 5.3E-07 1.8E-11 90.5 13.8 38 7-44 336-373 (776)
178 4gde_A UDP-galactopyranose mut 98.6 2.8E-08 9.6E-13 95.8 4.5 46 1-46 4-50 (513)
179 1v59_A Dihydrolipoamide dehydr 98.6 4E-07 1.4E-11 86.9 12.4 108 7-154 183-290 (478)
180 1ges_A Glutathione reductase; 98.6 3.6E-07 1.2E-11 86.4 11.8 102 7-154 167-268 (450)
181 2bs2_A Quinol-fumarate reducta 98.6 7.3E-07 2.5E-11 87.9 13.9 36 7-42 5-40 (660)
182 2e1m_A L-glutamate oxidase; L- 98.5 2.5E-07 8.4E-12 84.7 9.8 43 5-47 42-85 (376)
183 4b1b_A TRXR, thioredoxin reduc 98.5 5.2E-07 1.8E-11 86.9 12.4 101 7-155 223-323 (542)
184 3gyx_A Adenylylsulfate reducta 98.5 2.3E-07 7.8E-12 91.5 9.7 36 7-42 22-63 (662)
185 3lxd_A FAD-dependent pyridine 98.5 7.2E-07 2.5E-11 83.5 12.4 102 7-153 152-253 (415)
186 1lvl_A Dihydrolipoamide dehydr 98.5 2.6E-07 8.8E-12 87.7 9.2 102 7-155 171-272 (458)
187 1zk7_A HGII, reductase, mercur 98.5 6.8E-07 2.3E-11 85.1 11.8 98 7-153 176-273 (467)
188 1onf_A GR, grase, glutathione 98.5 1.1E-06 3.8E-11 84.2 13.4 102 7-154 176-278 (500)
189 2a8x_A Dihydrolipoyl dehydroge 98.5 8.1E-07 2.8E-11 84.4 12.0 103 7-154 171-274 (464)
190 2gqw_A Ferredoxin reductase; f 98.5 8E-07 2.7E-11 83.0 11.6 97 7-153 145-241 (408)
191 1zmd_A Dihydrolipoyl dehydroge 98.5 1.2E-06 4E-11 83.6 12.9 104 7-154 178-285 (474)
192 3hyw_A Sulfide-quinone reducta 98.5 3.6E-07 1.2E-11 86.0 9.2 103 187-325 3-110 (430)
193 3urh_A Dihydrolipoyl dehydroge 98.5 1.8E-06 6.2E-11 82.6 14.3 106 7-154 198-303 (491)
194 1jnr_A Adenylylsulfate reducta 98.5 1.2E-06 4.3E-11 86.4 13.4 36 7-42 22-61 (643)
195 3oc4_A Oxidoreductase, pyridin 98.5 1.6E-06 5.5E-11 82.1 13.7 102 7-155 147-248 (452)
196 1dxl_A Dihydrolipoamide dehydr 98.5 6.3E-07 2.2E-11 85.3 10.9 103 7-154 177-282 (470)
197 3fg2_P Putative rubredoxin red 98.5 7.6E-07 2.6E-11 83.0 11.2 102 7-153 142-243 (404)
198 3ef6_A Toluene 1,2-dioxygenase 98.5 2.8E-07 9.7E-12 86.1 8.1 101 7-153 143-243 (410)
199 2qae_A Lipoamide, dihydrolipoy 98.5 1.1E-06 3.7E-11 83.6 12.2 103 7-154 174-279 (468)
200 1q1r_A Putidaredoxin reductase 98.5 9.7E-07 3.3E-11 83.0 11.4 102 7-153 149-252 (431)
201 3sx6_A Sulfide-quinone reducta 98.4 3E-07 1E-11 86.7 7.8 105 187-327 5-115 (437)
202 1ojt_A Surface protein; redox- 98.4 5.2E-07 1.8E-11 86.2 9.5 104 7-153 185-288 (482)
203 3ic9_A Dihydrolipoamide dehydr 98.4 1.5E-06 5.2E-11 83.1 12.6 105 7-155 174-278 (492)
204 1xdi_A RV3303C-LPDA; reductase 98.4 1.3E-06 4.5E-11 83.8 12.1 101 7-154 182-282 (499)
205 1fec_A Trypanothione reductase 98.4 1.3E-06 4.4E-11 83.6 12.0 102 7-154 187-291 (490)
206 1mo9_A ORF3; nucleotide bindin 98.4 1.3E-06 4.3E-11 84.4 11.9 100 8-153 215-318 (523)
207 3cgb_A Pyridine nucleotide-dis 98.4 8.5E-07 2.9E-11 84.6 10.5 100 6-153 185-284 (480)
208 2cdu_A NADPH oxidase; flavoenz 98.4 1.4E-06 4.9E-11 82.4 11.9 102 7-154 149-250 (452)
209 2wpf_A Trypanothione reductase 98.4 1.5E-06 5.2E-11 83.2 12.0 102 7-154 191-295 (495)
210 3iwa_A FAD-dependent pyridine 98.4 1.2E-06 4.1E-11 83.4 11.2 101 7-153 159-260 (472)
211 2bc0_A NADH oxidase; flavoprot 98.4 1.3E-06 4.4E-11 83.6 11.4 101 7-154 194-294 (490)
212 1xhc_A NADH oxidase /nitrite r 98.4 5.2E-07 1.8E-11 82.9 8.2 93 8-153 144-236 (367)
213 2hqm_A GR, grase, glutathione 98.4 1.9E-06 6.5E-11 82.2 12.0 103 7-153 185-287 (479)
214 2bcg_G Secretory pathway GDP d 98.4 2.5E-07 8.6E-12 87.6 5.8 43 6-48 10-52 (453)
215 2b9w_A Putative aminooxidase; 98.4 4E-07 1.4E-11 85.5 7.0 42 6-47 5-47 (424)
216 3o0h_A Glutathione reductase; 98.4 1.8E-06 6.3E-11 82.4 11.5 101 7-154 191-291 (484)
217 3ntd_A FAD-dependent pyridine 98.4 1.9E-06 6.4E-11 84.1 11.8 102 7-153 151-269 (565)
218 1v0j_A UDP-galactopyranose mut 98.4 3.1E-07 1.1E-11 85.4 5.6 48 1-48 1-49 (399)
219 3vrd_B FCCB subunit, flavocyto 98.4 6.5E-07 2.2E-11 83.4 7.8 106 185-327 1-111 (401)
220 4dgk_A Phytoene dehydrogenase; 98.4 2.7E-07 9.2E-12 88.6 5.3 38 8-45 2-39 (501)
221 3dgh_A TRXR-1, thioredoxin red 98.4 5.4E-06 1.8E-10 79.2 14.2 106 7-154 187-292 (483)
222 3s5w_A L-ornithine 5-monooxyge 98.4 4.2E-06 1.4E-10 79.4 13.3 132 7-152 227-378 (463)
223 1trb_A Thioredoxin reductase; 98.3 3E-06 1E-10 76.1 11.6 105 7-153 145-249 (320)
224 1m6i_A Programmed cell death p 98.3 2.5E-06 8.5E-11 81.7 11.5 101 7-153 180-284 (493)
225 3klj_A NAD(FAD)-dependent dehy 98.3 2.4E-07 8.3E-12 85.7 4.2 108 186-328 9-120 (385)
226 3fbs_A Oxidoreductase; structu 98.3 7.5E-07 2.6E-11 79.1 7.3 107 187-327 3-115 (297)
227 3lad_A Dihydrolipoamide dehydr 98.3 5.1E-06 1.7E-10 79.2 13.3 104 7-154 180-283 (476)
228 4eqs_A Coenzyme A disulfide re 98.3 1.3E-06 4.4E-11 82.3 8.6 96 7-153 147-242 (437)
229 3dgz_A Thioredoxin reductase 2 98.3 4.6E-06 1.6E-10 79.7 12.3 106 7-154 185-290 (488)
230 3hdq_A UDP-galactopyranose mut 98.3 6.3E-07 2.1E-11 82.7 6.0 43 6-48 28-70 (397)
231 3h8l_A NADH oxidase; membrane 98.3 6.5E-07 2.2E-11 83.6 6.2 105 187-327 2-116 (409)
232 3dk9_A Grase, GR, glutathione 98.3 5.8E-06 2E-10 78.8 12.9 110 7-154 187-296 (478)
233 2zbw_A Thioredoxin reductase; 98.3 5.7E-06 2E-10 74.8 11.7 100 7-153 152-254 (335)
234 3h28_A Sulfide-quinone reducta 98.3 2.3E-06 7.8E-11 80.5 9.1 105 187-327 3-112 (430)
235 4dsg_A UDP-galactopyranose mut 98.3 1.3E-06 4.5E-11 83.3 7.2 43 6-48 8-51 (484)
236 4dna_A Probable glutathione re 98.2 5.6E-06 1.9E-10 78.6 11.5 101 7-154 170-271 (463)
237 3qfa_A Thioredoxin reductase 1 98.2 1.5E-05 5.2E-10 76.7 13.7 107 7-154 210-318 (519)
238 1rsg_A FMS1 protein; FAD bindi 98.2 8E-07 2.7E-11 85.7 4.3 39 7-45 8-47 (516)
239 2yg5_A Putrescine oxidase; oxi 98.2 1.2E-06 4.3E-11 82.8 5.5 40 7-46 5-44 (453)
240 3kd9_A Coenzyme A disulfide re 98.2 9.1E-06 3.1E-10 76.8 11.1 99 7-153 148-246 (449)
241 2ivd_A PPO, PPOX, protoporphyr 98.2 1.4E-06 4.8E-11 83.1 5.6 40 6-45 15-54 (478)
242 1sez_A Protoporphyrinogen oxid 98.2 1.7E-06 5.9E-11 83.1 5.9 41 7-47 13-53 (504)
243 3ics_A Coenzyme A-disulfide re 98.2 6.7E-06 2.3E-10 80.5 10.1 98 7-153 187-284 (588)
244 3d1c_A Flavin-containing putat 98.1 7.4E-06 2.5E-10 75.1 9.6 108 7-153 166-274 (369)
245 2jae_A L-amino acid oxidase; o 98.1 1.9E-06 6.5E-11 82.4 5.8 40 6-45 10-49 (489)
246 1s3e_A Amine oxidase [flavin-c 98.1 1.6E-06 5.4E-11 83.7 5.1 39 7-45 4-42 (520)
247 3ab1_A Ferredoxin--NADP reduct 98.1 1E-05 3.5E-10 74.0 10.2 100 7-153 163-265 (360)
248 4g6h_A Rotenone-insensitive NA 98.1 1.3E-05 4.3E-10 76.8 11.1 99 8-147 218-330 (502)
249 3l8k_A Dihydrolipoyl dehydroge 98.1 1.6E-05 5.6E-10 75.4 11.5 102 7-154 172-275 (466)
250 1i8t_A UDP-galactopyranose mut 98.1 2.4E-06 8.3E-11 78.5 5.4 40 8-47 2-41 (367)
251 2bi7_A UDP-galactopyranose mut 98.1 2.8E-06 9.5E-11 78.5 5.8 41 8-48 4-44 (384)
252 2vvm_A Monoamine oxidase N; FA 98.1 2.6E-06 8.9E-11 81.6 5.6 38 8-45 40-77 (495)
253 3nks_A Protoporphyrinogen oxid 98.1 2E-06 6.8E-11 82.0 4.8 38 8-45 3-42 (477)
254 2iid_A L-amino-acid oxidase; f 98.1 2.8E-06 9.5E-11 81.5 5.3 41 6-46 32-72 (498)
255 3ihm_A Styrene monooxygenase A 98.1 2.1E-06 7.3E-11 80.6 4.2 35 6-40 21-55 (430)
256 4fk1_A Putative thioredoxin re 98.0 8.1E-06 2.8E-10 72.8 7.4 33 187-219 7-39 (304)
257 3lov_A Protoporphyrinogen oxid 98.0 3.8E-06 1.3E-10 80.0 5.3 39 7-45 4-44 (475)
258 1fl2_A Alkyl hydroperoxide red 98.0 2.2E-05 7.7E-10 70.0 10.1 99 7-153 144-244 (310)
259 2x8g_A Thioredoxin glutathione 98.0 4.4E-05 1.5E-09 74.9 12.7 103 7-153 286-397 (598)
260 3v76_A Flavoprotein; structura 98.0 2E-06 6.8E-11 80.3 2.9 135 186-324 27-187 (417)
261 2q7v_A Thioredoxin reductase; 98.0 1.6E-05 5.6E-10 71.5 8.8 100 7-153 152-251 (325)
262 1b37_A Protein (polyamine oxid 98.0 5.2E-06 1.8E-10 79.0 5.6 42 7-48 4-46 (472)
263 2q0l_A TRXR, thioredoxin reduc 98.0 1.9E-05 6.4E-10 70.6 8.9 102 7-154 143-244 (311)
264 3itj_A Thioredoxin reductase 1 98.0 3E-05 1E-09 70.0 10.3 101 7-153 173-273 (338)
265 1d5t_A Guanine nucleotide diss 98.0 5.8E-06 2E-10 77.7 5.6 42 7-48 6-47 (433)
266 3f8d_A Thioredoxin reductase ( 98.0 3.1E-05 1E-09 69.4 10.0 99 7-152 154-252 (323)
267 1c0p_A D-amino acid oxidase; a 98.0 7.3E-06 2.5E-10 75.1 5.8 35 7-41 6-40 (363)
268 3cty_A Thioredoxin reductase; 97.9 2.8E-05 9.6E-10 69.7 9.2 100 7-153 155-254 (319)
269 3p1w_A Rabgdi protein; GDI RAB 97.9 7.9E-06 2.7E-10 77.0 5.2 41 7-47 20-60 (475)
270 1vdc_A NTR, NADPH dependent th 97.9 3.1E-05 1.1E-09 69.8 8.9 103 7-154 159-262 (333)
271 2a87_A TRXR, TR, thioredoxin r 97.9 5E-05 1.7E-09 68.6 9.8 101 7-154 155-255 (335)
272 3lzw_A Ferredoxin--NADP reduct 97.9 8.1E-05 2.8E-09 66.9 11.1 100 7-154 154-253 (332)
273 3r9u_A Thioredoxin reductase; 97.9 3.2E-05 1.1E-09 69.0 8.1 99 7-154 147-247 (315)
274 2gqf_A Hypothetical protein HI 97.9 6.7E-06 2.3E-10 76.4 3.6 135 187-325 5-169 (401)
275 3pl8_A Pyranose 2-oxidase; sub 97.8 1.2E-05 4.1E-10 78.9 4.9 40 7-46 46-85 (623)
276 4a9w_A Monooxygenase; baeyer-v 97.8 1.2E-05 4E-10 73.2 4.5 33 187-219 4-36 (357)
277 2z3y_A Lysine-specific histone 97.8 1.5E-05 5.1E-10 79.1 5.5 40 6-45 106-145 (662)
278 3nlc_A Uncharacterized protein 97.8 3E-05 1E-09 74.6 7.0 132 186-325 107-278 (549)
279 3g3e_A D-amino-acid oxidase; F 97.8 1.1E-05 3.7E-10 73.6 3.7 34 8-41 1-40 (351)
280 2xag_A Lysine-specific histone 97.8 1.9E-05 6.6E-10 79.8 5.8 41 6-46 277-317 (852)
281 2bry_A NEDD9 interacting prote 97.8 2.4E-05 8.1E-10 74.9 5.9 127 186-327 92-233 (497)
282 3g5s_A Methylenetetrahydrofola 97.7 2.8E-05 9.6E-10 70.6 5.5 35 8-42 2-36 (443)
283 3alj_A 2-methyl-3-hydroxypyrid 97.7 0.00011 3.6E-09 67.7 9.5 133 186-325 11-161 (379)
284 2i0z_A NAD(FAD)-utilizing dehy 97.7 2.2E-05 7.5E-10 74.1 4.9 138 187-324 27-191 (447)
285 3k30_A Histamine dehydrogenase 97.7 7.9E-05 2.7E-09 74.3 9.0 101 7-152 523-625 (690)
286 4gcm_A TRXR, thioredoxin reduc 97.7 3.1E-05 1.1E-09 69.2 5.5 33 187-219 7-39 (312)
287 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00019 6.5E-09 69.0 11.1 99 7-153 355-455 (521)
288 2x3n_A Probable FAD-dependent 97.7 7.1E-05 2.4E-09 69.4 7.4 136 187-324 7-166 (399)
289 4a5l_A Thioredoxin reductase; 97.7 0.00015 5.2E-09 64.6 9.2 34 7-40 152-185 (314)
290 2xve_A Flavin-containing monoo 97.6 0.00017 5.8E-09 68.3 9.3 35 7-41 197-231 (464)
291 2zxi_A TRNA uridine 5-carboxym 97.6 0.0001 3.4E-09 71.6 7.1 140 187-327 28-183 (637)
292 3k7m_X 6-hydroxy-L-nicotine ox 97.6 9.2E-05 3.1E-09 69.4 6.6 79 284-364 214-306 (431)
293 2vou_A 2,6-dihydroxypyridine h 97.5 0.00014 4.7E-09 67.4 7.2 34 186-219 5-38 (397)
294 1kdg_A CDH, cellobiose dehydro 97.5 6.8E-05 2.3E-09 72.7 5.0 36 5-40 5-40 (546)
295 4ap3_A Steroid monooxygenase; 97.5 0.00017 5.8E-09 69.8 7.7 34 186-219 21-54 (549)
296 3gwf_A Cyclohexanone monooxyge 97.5 0.00019 6.5E-09 69.3 7.8 33 187-219 9-42 (540)
297 2gjc_A Thiazole biosynthetic e 97.5 9.1E-05 3.1E-09 66.1 5.2 32 188-219 67-100 (326)
298 3ces_A MNMG, tRNA uridine 5-ca 97.5 0.00025 8.5E-09 69.1 8.2 139 187-326 29-183 (651)
299 1vg0_A RAB proteins geranylger 97.5 0.00012 4.1E-09 71.3 5.8 44 5-48 6-49 (650)
300 2gag_A Heterotetrameric sarcos 97.5 0.0004 1.4E-08 71.7 10.1 98 8-153 285-385 (965)
301 2gv8_A Monooxygenase; FMO, FAD 97.4 0.00039 1.3E-08 65.5 9.2 34 7-40 212-246 (447)
302 3jsk_A Cypbp37 protein; octame 97.4 2E-05 6.7E-10 70.9 -0.2 34 187-220 80-115 (344)
303 3t37_A Probable dehydrogenase; 97.4 8.8E-05 3E-09 71.5 4.3 36 6-41 16-52 (526)
304 3cp8_A TRNA uridine 5-carboxym 97.4 0.00035 1.2E-08 68.0 8.3 137 186-326 21-176 (641)
305 3uox_A Otemo; baeyer-villiger 97.4 7.8E-05 2.7E-09 72.0 3.7 34 186-219 9-42 (545)
306 4dgk_A Phytoene dehydrogenase; 97.4 0.00012 4E-09 70.2 4.8 33 187-219 2-34 (501)
307 2vdc_G Glutamate synthase [NAD 97.3 0.0002 6.7E-09 67.6 5.7 34 7-40 264-298 (456)
308 1ps9_A 2,4-dienoyl-COA reducta 97.3 0.00052 1.8E-08 68.1 8.8 127 7-152 494-629 (671)
309 3cgv_A Geranylgeranyl reductas 97.3 1.3E-05 4.6E-10 74.1 -2.7 34 187-220 5-38 (397)
310 1cjc_A Protein (adrenodoxin re 97.3 0.0015 5.1E-08 61.7 11.3 35 7-41 145-200 (460)
311 3nix_A Flavoprotein/dehydrogen 97.3 0.00011 3.7E-09 68.6 3.4 33 187-219 6-38 (421)
312 3ayj_A Pro-enzyme of L-phenyla 97.3 8.4E-05 2.9E-09 73.3 2.6 36 7-42 56-100 (721)
313 1yvv_A Amine oxidase, flavin-c 97.3 0.0003 1E-08 63.4 6.2 33 187-219 3-35 (336)
314 3q9t_A Choline dehydrogenase a 97.3 0.00017 5.7E-09 70.0 4.6 36 6-41 5-41 (577)
315 3rp8_A Flavoprotein monooxygen 97.3 0.00013 4.5E-09 67.8 3.7 36 185-220 22-57 (407)
316 1o94_A Tmadh, trimethylamine d 97.3 0.00074 2.5E-08 67.6 9.1 104 7-153 528-648 (729)
317 3fmw_A Oxygenase; mithramycin, 97.2 0.00012 4.1E-09 71.1 2.9 34 187-220 50-83 (570)
318 4hb9_A Similarities with proba 97.2 0.00039 1.3E-08 64.4 6.3 33 188-220 3-35 (412)
319 2xdo_A TETX2 protein; tetracyc 97.2 0.00082 2.8E-08 62.2 8.4 35 186-220 26-60 (398)
320 1ju2_A HydroxynitrIle lyase; f 97.2 0.00016 5.3E-09 69.8 3.6 35 7-42 26-60 (536)
321 3qj4_A Renalase; FAD/NAD(P)-bi 97.2 0.00026 8.8E-09 64.1 4.8 32 188-219 3-37 (342)
322 3dme_A Conserved exported prot 97.2 0.0002 6.9E-09 65.3 4.1 33 187-219 5-37 (369)
323 1y0p_A Fumarate reductase flav 97.2 0.00062 2.1E-08 66.3 7.7 35 186-220 126-160 (571)
324 1n4w_A CHOD, cholesterol oxida 97.2 0.00029 1E-08 67.4 5.1 37 6-42 4-40 (504)
325 3i3l_A Alkylhalidase CMLS; fla 97.2 0.00082 2.8E-08 65.5 8.0 34 186-219 23-56 (591)
326 1lqt_A FPRA; NADP+ derivative, 97.2 0.0018 6.1E-08 61.1 10.0 35 7-41 147-202 (456)
327 1k0i_A P-hydroxybenzoate hydro 97.1 0.00034 1.2E-08 64.7 5.0 138 188-326 4-165 (394)
328 3qvp_A Glucose oxidase; oxidor 97.1 0.0003 1E-08 68.2 4.4 35 6-40 18-53 (583)
329 1gte_A Dihydropyrimidine dehyd 97.0 0.0031 1E-07 65.6 11.3 33 8-40 333-366 (1025)
330 1qo8_A Flavocytochrome C3 fuma 97.0 0.00067 2.3E-08 66.0 6.0 34 187-220 122-155 (566)
331 1y56_B Sarcosine oxidase; dehy 97.0 0.00079 2.7E-08 61.8 6.2 33 187-219 6-38 (382)
332 2g1u_A Hypothetical protein TM 97.0 0.00069 2.4E-08 53.6 5.0 40 1-40 13-52 (155)
333 1ryi_A Glycine oxidase; flavop 97.0 0.00078 2.7E-08 61.8 6.1 34 186-219 17-50 (382)
334 1coy_A Cholesterol oxidase; ox 97.0 0.00048 1.6E-08 66.0 4.7 36 6-41 10-45 (507)
335 1w4x_A Phenylacetone monooxyge 97.0 0.00062 2.1E-08 65.8 5.1 34 187-220 17-50 (542)
336 3ps9_A TRNA 5-methylaminomethy 97.0 0.0012 4.2E-08 65.6 7.2 34 186-219 272-305 (676)
337 3fim_B ARYL-alcohol oxidase; A 96.9 0.00039 1.3E-08 67.3 3.0 36 7-42 2-38 (566)
338 3e1t_A Halogenase; flavoprotei 96.9 0.00069 2.4E-08 65.0 4.7 33 187-219 8-40 (512)
339 4gde_A UDP-galactopyranose mut 96.9 0.0021 7E-08 61.5 8.0 44 278-321 226-273 (513)
340 3atr_A Conserved archaeal prot 96.8 0.00045 1.5E-08 65.2 2.9 34 187-220 7-40 (453)
341 1gpe_A Protein (glucose oxidas 96.8 0.0008 2.7E-08 65.6 4.6 36 6-41 23-59 (587)
342 2qa2_A CABE, polyketide oxygen 96.8 0.00095 3.3E-08 63.7 4.8 35 186-220 12-46 (499)
343 2gmh_A Electron transfer flavo 96.8 0.0012 4.1E-08 64.4 5.6 34 187-220 36-75 (584)
344 2qa1_A PGAE, polyketide oxygen 96.8 0.00094 3.2E-08 63.8 4.5 35 186-220 11-45 (500)
345 2jbv_A Choline oxidase; alcoho 96.8 0.00094 3.2E-08 64.5 4.4 37 6-42 12-49 (546)
346 3pvc_A TRNA 5-methylaminomethy 96.7 0.0011 3.7E-08 66.1 4.9 34 186-219 264-297 (689)
347 3nyc_A D-arginine dehydrogenas 96.7 0.0019 6.6E-08 59.0 6.3 33 186-219 9-41 (381)
348 1d4d_A Flavocytochrome C fumar 96.7 0.0015 5.1E-08 63.5 5.8 35 186-220 126-160 (572)
349 2gag_B Heterotetrameric sarcos 96.7 0.0014 5E-08 60.5 5.4 34 186-219 21-56 (405)
350 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0017 5.7E-08 54.5 4.6 36 184-219 29-64 (223)
351 4at0_A 3-ketosteroid-delta4-5a 96.6 0.0038 1.3E-07 59.7 7.7 34 187-220 42-75 (510)
352 3oz2_A Digeranylgeranylglycero 96.6 0.00014 4.8E-09 67.0 -2.5 33 188-220 6-38 (397)
353 2aqj_A Tryptophan halogenase, 96.6 0.0057 1.9E-07 59.0 8.7 34 186-219 5-41 (538)
354 3ihg_A RDME; flavoenzyme, anth 96.6 0.0012 4E-08 63.7 3.8 34 187-220 6-39 (535)
355 2pyx_A Tryptophan halogenase; 96.5 0.0031 1.1E-07 60.6 6.5 34 186-219 7-52 (526)
356 2weu_A Tryptophan 5-halogenase 96.5 0.0048 1.7E-07 59.0 7.5 33 187-219 3-38 (511)
357 1y56_A Hypothetical protein PH 96.5 0.0014 4.7E-08 62.6 3.4 32 187-219 109-140 (493)
358 1chu_A Protein (L-aspartate ox 96.4 0.012 4E-07 56.7 9.8 33 187-220 9-41 (540)
359 3fwz_A Inner membrane protein 96.4 0.0047 1.6E-07 47.8 5.7 35 6-40 6-40 (140)
360 4b63_A L-ornithine N5 monooxyg 96.3 0.046 1.6E-06 52.0 12.8 34 7-40 246-281 (501)
361 2qcu_A Aerobic glycerol-3-phos 96.2 0.0069 2.3E-07 57.8 6.8 33 187-219 4-36 (501)
362 1lss_A TRK system potassium up 96.1 0.0058 2E-07 47.0 4.8 34 7-40 4-37 (140)
363 2wdq_A Succinate dehydrogenase 96.1 0.026 8.8E-07 55.0 10.1 33 188-220 9-41 (588)
364 2h88_A Succinate dehydrogenase 96.1 0.017 6E-07 56.4 8.8 33 188-220 20-52 (621)
365 3llv_A Exopolyphosphatase-rela 96.0 0.0084 2.9E-07 46.3 5.1 33 8-40 7-39 (141)
366 1pj5_A N,N-dimethylglycine oxi 96.0 0.0071 2.4E-07 61.6 5.8 34 187-220 5-39 (830)
367 1id1_A Putative potassium chan 95.9 0.012 4.1E-07 46.2 5.5 33 8-40 4-36 (153)
368 3ic5_A Putative saccharopine d 95.9 0.0082 2.8E-07 44.5 4.3 34 7-40 5-39 (118)
369 3kkj_A Amine oxidase, flavin-c 95.8 0.0037 1.3E-07 53.9 2.7 32 188-219 4-35 (336)
370 1kf6_A Fumarate reductase flav 95.8 0.039 1.3E-06 53.8 10.0 33 188-220 7-41 (602)
371 2e5v_A L-aspartate oxidase; ar 95.7 0.01 3.6E-07 56.1 5.5 31 188-218 1-31 (472)
372 3ado_A Lambda-crystallin; L-gu 95.4 0.012 4.2E-07 52.1 4.3 34 7-40 6-39 (319)
373 3c85_A Putative glutathione-re 95.4 0.021 7.2E-07 46.3 5.4 34 7-40 39-73 (183)
374 2hmt_A YUAA protein; RCK, KTN, 95.3 0.019 6.4E-07 44.2 4.7 33 8-40 7-39 (144)
375 2dkh_A 3-hydroxybenzoate hydro 95.2 0.0067 2.3E-07 59.8 2.2 33 187-219 33-66 (639)
376 3l4b_C TRKA K+ channel protien 95.0 0.019 6.6E-07 48.0 4.3 32 9-40 2-33 (218)
377 3dfz_A SIRC, precorrin-2 dehyd 95.0 0.026 9E-07 47.2 5.0 34 7-40 31-64 (223)
378 3g0o_A 3-hydroxyisobutyrate de 95.0 0.021 7.3E-07 50.4 4.7 40 1-40 1-40 (303)
379 3i83_A 2-dehydropantoate 2-red 94.9 0.022 7.4E-07 50.9 4.6 33 187-219 3-35 (320)
380 1pzg_A LDH, lactate dehydrogen 94.9 0.028 9.6E-07 50.3 5.2 34 7-40 9-43 (331)
381 1kyq_A Met8P, siroheme biosynt 94.9 0.022 7.7E-07 49.2 4.3 34 7-40 13-46 (274)
382 3lk7_A UDP-N-acetylmuramoylala 94.7 0.031 1.1E-06 52.5 5.1 34 7-40 9-42 (451)
383 2x5o_A UDP-N-acetylmuramoylala 94.6 0.024 8.2E-07 53.0 4.2 36 7-42 5-40 (439)
384 4dio_A NAD(P) transhydrogenase 94.6 0.034 1.2E-06 50.8 4.9 34 7-40 190-223 (405)
385 3l6d_A Putative oxidoreductase 94.4 0.047 1.6E-06 48.3 5.5 35 6-40 8-42 (306)
386 1f0y_A HCDH, L-3-hydroxyacyl-C 94.4 0.043 1.5E-06 48.4 5.0 33 8-40 16-48 (302)
387 3hn2_A 2-dehydropantoate 2-red 94.4 0.041 1.4E-06 48.9 4.9 33 187-219 3-35 (312)
388 3lk7_A UDP-N-acetylmuramoylala 94.3 0.067 2.3E-06 50.2 6.5 36 184-219 7-42 (451)
389 1y6j_A L-lactate dehydrogenase 94.3 0.037 1.3E-06 49.2 4.5 35 6-40 6-42 (318)
390 3i83_A 2-dehydropantoate 2-red 94.3 0.039 1.3E-06 49.2 4.7 33 8-40 3-35 (320)
391 2g1u_A Hypothetical protein TM 94.3 0.04 1.4E-06 43.2 4.2 37 183-219 16-52 (155)
392 3ihm_A Styrene monooxygenase A 94.2 0.023 7.9E-07 53.0 3.1 34 186-219 22-55 (430)
393 4e12_A Diketoreductase; oxidor 94.2 0.041 1.4E-06 48.1 4.5 33 8-40 5-37 (283)
394 2dpo_A L-gulonate 3-dehydrogen 94.2 0.048 1.6E-06 48.5 4.9 34 7-40 6-39 (319)
395 3p2y_A Alanine dehydrogenase/p 94.2 0.039 1.3E-06 50.0 4.3 34 7-40 184-217 (381)
396 3pid_A UDP-glucose 6-dehydroge 94.1 0.044 1.5E-06 50.7 4.6 34 6-40 35-68 (432)
397 2a9f_A Putative malic enzyme ( 94.1 0.047 1.6E-06 49.4 4.6 34 7-40 188-222 (398)
398 1ks9_A KPA reductase;, 2-dehyd 94.0 0.051 1.7E-06 47.5 4.7 33 9-41 2-34 (291)
399 2raf_A Putative dinucleotide-b 93.9 0.055 1.9E-06 44.9 4.5 35 7-41 19-53 (209)
400 1pjq_A CYSG, siroheme synthase 93.9 0.032 1.1E-06 52.4 3.4 36 184-219 10-45 (457)
401 3hn2_A 2-dehydropantoate 2-red 93.9 0.046 1.6E-06 48.5 4.2 33 8-40 3-35 (312)
402 1lld_A L-lactate dehydrogenase 93.9 0.054 1.8E-06 48.2 4.7 34 7-40 7-42 (319)
403 2y0c_A BCEC, UDP-glucose dehyd 93.8 0.051 1.7E-06 51.3 4.7 34 7-40 8-41 (478)
404 3eag_A UDP-N-acetylmuramate:L- 93.8 0.079 2.7E-06 47.3 5.7 34 186-219 4-38 (326)
405 3oj0_A Glutr, glutamyl-tRNA re 93.8 0.032 1.1E-06 43.2 2.7 34 7-40 21-54 (144)
406 3ktd_A Prephenate dehydrogenas 93.7 0.071 2.4E-06 47.8 5.1 40 1-40 2-41 (341)
407 1kyq_A Met8P, siroheme biosynt 93.6 0.046 1.6E-06 47.2 3.6 36 184-219 11-46 (274)
408 2ewd_A Lactate dehydrogenase,; 93.6 0.066 2.2E-06 47.6 4.7 34 7-40 4-38 (317)
409 3g5s_A Methylenetetrahydrofola 93.6 0.035 1.2E-06 50.5 2.9 33 187-219 2-34 (443)
410 1vl6_A Malate oxidoreductase; 93.6 0.065 2.2E-06 48.4 4.6 34 6-39 191-225 (388)
411 3g17_A Similar to 2-dehydropan 93.5 0.063 2.1E-06 47.2 4.5 33 8-40 3-35 (294)
412 3nrn_A Uncharacterized protein 93.5 0.038 1.3E-06 51.2 3.2 33 187-219 1-33 (421)
413 3hwr_A 2-dehydropantoate 2-red 93.5 0.082 2.8E-06 47.0 5.2 34 185-219 18-51 (318)
414 2oln_A NIKD protein; flavoprot 93.5 0.044 1.5E-06 50.3 3.5 33 188-220 6-38 (397)
415 4g65_A TRK system potassium up 93.5 0.042 1.4E-06 51.6 3.3 34 7-40 3-36 (461)
416 1jw9_B Molybdopterin biosynthe 93.4 0.066 2.2E-06 45.8 4.2 33 8-40 32-65 (249)
417 2hjr_A Malate dehydrogenase; m 93.4 0.081 2.8E-06 47.2 4.9 34 7-40 14-48 (328)
418 3gg2_A Sugar dehydrogenase, UD 93.4 0.067 2.3E-06 50.1 4.5 33 8-40 3-35 (450)
419 3ka7_A Oxidoreductase; structu 93.3 0.039 1.3E-06 51.1 3.0 32 188-219 2-33 (425)
420 1x13_A NAD(P) transhydrogenase 93.3 0.071 2.4E-06 49.0 4.6 34 7-40 172-205 (401)
421 1t2d_A LDH-P, L-lactate dehydr 93.3 0.084 2.9E-06 47.0 4.9 33 8-40 5-38 (322)
422 3doj_A AT3G25530, dehydrogenas 93.3 0.081 2.8E-06 46.9 4.8 34 7-40 21-54 (310)
423 4a7p_A UDP-glucose dehydrogena 93.3 0.076 2.6E-06 49.5 4.7 35 7-41 8-42 (446)
424 3c4a_A Probable tryptophan hyd 93.3 0.046 1.6E-06 49.9 3.3 33 188-220 2-36 (381)
425 3eag_A UDP-N-acetylmuramate:L- 93.3 0.087 3E-06 47.0 5.0 34 7-40 4-38 (326)
426 3k96_A Glycerol-3-phosphate de 93.3 0.09 3.1E-06 47.5 5.1 34 7-40 29-62 (356)
427 3dtt_A NADP oxidoreductase; st 93.3 0.092 3.1E-06 44.7 4.9 34 7-40 19-52 (245)
428 3ghy_A Ketopantoate reductase 93.2 0.082 2.8E-06 47.4 4.7 32 8-39 4-35 (335)
429 2ew2_A 2-dehydropantoate 2-red 93.2 0.076 2.6E-06 46.9 4.5 33 8-40 4-36 (316)
430 3k6j_A Protein F01G10.3, confi 93.2 0.099 3.4E-06 48.8 5.3 33 8-40 55-87 (460)
431 1zej_A HBD-9, 3-hydroxyacyl-CO 93.2 0.083 2.8E-06 46.3 4.5 33 7-40 12-44 (293)
432 4ffl_A PYLC; amino acid, biosy 93.1 0.092 3.1E-06 47.6 5.0 36 8-43 2-37 (363)
433 2v6b_A L-LDH, L-lactate dehydr 93.1 0.081 2.8E-06 46.7 4.5 32 9-40 2-35 (304)
434 3vps_A TUNA, NAD-dependent epi 93.1 0.099 3.4E-06 46.2 5.2 41 1-41 1-42 (321)
435 2vns_A Metalloreductase steap3 93.1 0.11 3.6E-06 43.3 5.0 34 7-40 28-61 (215)
436 1l7d_A Nicotinamide nucleotide 93.1 0.092 3.1E-06 48.1 4.9 34 7-40 172-205 (384)
437 2uzz_A N-methyl-L-tryptophan o 93.0 0.039 1.3E-06 50.1 2.4 32 188-219 4-35 (372)
438 3g79_A NDP-N-acetyl-D-galactos 93.0 0.073 2.5E-06 50.0 4.2 35 7-41 18-54 (478)
439 3pef_A 6-phosphogluconate dehy 93.0 0.086 2.9E-06 46.1 4.5 33 8-40 2-34 (287)
440 2gf3_A MSOX, monomeric sarcosi 92.9 0.049 1.7E-06 49.7 2.9 33 187-219 4-36 (389)
441 3c96_A Flavin-containing monoo 92.9 0.059 2E-06 49.8 3.5 34 187-220 5-39 (410)
442 2iid_A L-amino-acid oxidase; f 92.9 0.054 1.8E-06 51.4 3.3 34 186-219 33-66 (498)
443 3qha_A Putative oxidoreductase 92.9 0.084 2.9E-06 46.4 4.3 35 7-41 15-49 (296)
444 1id1_A Putative potassium chan 92.9 0.086 2.9E-06 41.1 3.9 34 186-219 3-36 (153)
445 1c0p_A D-amino acid oxidase; a 92.9 0.065 2.2E-06 48.5 3.6 34 186-219 6-39 (363)
446 3tl2_A Malate dehydrogenase; c 92.8 0.12 4E-06 45.8 5.0 33 7-39 8-41 (315)
447 3l9w_A Glutathione-regulated p 92.8 0.11 3.9E-06 47.9 5.1 34 7-40 4-37 (413)
448 4dll_A 2-hydroxy-3-oxopropiona 92.7 0.097 3.3E-06 46.6 4.5 34 7-40 31-64 (320)
449 2aef_A Calcium-gated potassium 92.7 0.058 2E-06 45.6 2.9 33 7-40 9-41 (234)
450 3ius_A Uncharacterized conserv 92.6 0.12 4E-06 45.0 4.8 34 7-40 5-38 (286)
451 1z82_A Glycerol-3-phosphate de 92.6 0.11 3.8E-06 46.5 4.7 34 7-40 14-47 (335)
452 3d1l_A Putative NADP oxidoredu 92.6 0.095 3.3E-06 45.1 4.1 34 7-40 10-44 (266)
453 3g3e_A D-amino-acid oxidase; F 92.6 0.079 2.7E-06 47.7 3.7 32 188-219 2-39 (351)
454 3vtf_A UDP-glucose 6-dehydroge 92.6 0.13 4.3E-06 47.8 5.0 34 7-40 21-54 (444)
455 1pjc_A Protein (L-alanine dehy 92.5 0.11 3.8E-06 47.0 4.6 33 8-40 168-200 (361)
456 1mv8_A GMD, GDP-mannose 6-dehy 92.5 0.089 3E-06 49.1 4.0 32 9-40 2-33 (436)
457 3nks_A Protoporphyrinogen oxid 92.5 0.057 1.9E-06 50.9 2.7 33 187-219 3-37 (477)
458 2b9w_A Putative aminooxidase; 92.4 0.068 2.3E-06 49.5 3.1 34 186-219 6-40 (424)
459 1zcj_A Peroxisomal bifunctiona 92.3 0.13 4.6E-06 48.2 5.0 33 8-40 38-70 (463)
460 3ego_A Probable 2-dehydropanto 92.3 0.1 3.5E-06 46.2 4.0 32 187-219 3-34 (307)
461 3ego_A Probable 2-dehydropanto 92.3 0.12 4.2E-06 45.6 4.5 32 8-40 3-34 (307)
462 2e1m_A L-glutamate oxidase; L- 92.3 0.076 2.6E-06 48.3 3.2 34 185-218 43-76 (376)
463 3i6d_A Protoporphyrinogen oxid 92.3 0.053 1.8E-06 50.9 2.2 33 187-219 6-44 (470)
464 1guz_A Malate dehydrogenase; o 92.3 0.13 4.4E-06 45.6 4.6 32 9-40 2-35 (310)
465 1jay_A Coenzyme F420H2:NADP+ o 92.2 0.15 5E-06 42.2 4.7 32 9-40 2-34 (212)
466 3dje_A Fructosyl amine: oxygen 92.2 0.079 2.7E-06 49.3 3.3 35 186-220 6-41 (438)
467 2qyt_A 2-dehydropantoate 2-red 92.2 0.089 3.1E-06 46.6 3.5 32 7-38 8-45 (317)
468 3pqe_A L-LDH, L-lactate dehydr 92.2 0.14 4.6E-06 45.6 4.6 34 7-40 5-40 (326)
469 3pdu_A 3-hydroxyisobutyrate de 92.1 0.1 3.4E-06 45.6 3.7 33 8-40 2-34 (287)
470 2eez_A Alanine dehydrogenase; 92.1 0.16 5.3E-06 46.2 5.1 34 7-40 166-199 (369)
471 1bg6_A N-(1-D-carboxylethyl)-L 92.1 0.13 4.4E-06 46.4 4.5 33 8-40 5-37 (359)
472 2jae_A L-amino acid oxidase; o 92.1 0.085 2.9E-06 49.9 3.4 34 186-219 11-44 (489)
473 3ghy_A Ketopantoate reductase 92.0 0.13 4.4E-06 46.1 4.4 33 187-219 4-36 (335)
474 3rui_A Ubiquitin-like modifier 92.0 0.15 5.1E-06 45.4 4.7 34 7-40 34-68 (340)
475 1ur5_A Malate dehydrogenase; o 92.0 0.15 5.2E-06 45.0 4.8 33 8-40 3-36 (309)
476 2i6t_A Ubiquitin-conjugating e 92.0 0.14 4.7E-06 45.1 4.4 34 7-40 14-49 (303)
477 3hwr_A 2-dehydropantoate 2-red 92.0 0.15 5E-06 45.4 4.6 33 7-40 19-51 (318)
478 1txg_A Glycerol-3-phosphate de 91.9 0.13 4.3E-06 46.0 4.2 30 9-38 2-31 (335)
479 2vhw_A Alanine dehydrogenase; 91.9 0.17 5.7E-06 46.2 5.1 34 7-40 168-201 (377)
480 3gvi_A Malate dehydrogenase; N 91.9 0.17 5.8E-06 45.0 4.9 33 8-40 8-41 (324)
481 1a5z_A L-lactate dehydrogenase 91.9 0.13 4.5E-06 45.7 4.2 32 9-40 2-35 (319)
482 1lss_A TRK system potassium up 91.8 0.12 4.2E-06 39.2 3.5 34 186-219 4-37 (140)
483 3fwz_A Inner membrane protein 91.8 0.12 4.1E-06 39.7 3.4 34 186-219 7-40 (140)
484 2uyy_A N-PAC protein; long-cha 91.7 0.2 6.7E-06 44.4 5.2 33 8-40 31-63 (316)
485 4ezb_A Uncharacterized conserv 91.7 0.15 5.1E-06 45.3 4.4 34 7-40 24-58 (317)
486 1dlj_A UDP-glucose dehydrogena 91.7 0.13 4.5E-06 47.3 4.1 31 9-40 2-32 (402)
487 3c4n_A Uncharacterized protein 91.7 0.09 3.1E-06 48.5 3.0 33 187-219 37-71 (405)
488 2bcg_G Secretory pathway GDP d 91.7 0.079 2.7E-06 49.7 2.7 33 187-219 12-44 (453)
489 3ew7_A LMO0794 protein; Q8Y8U8 91.6 0.2 6.7E-06 41.5 4.8 32 9-40 2-34 (221)
490 2bi7_A UDP-galactopyranose mut 91.6 0.11 3.7E-06 47.6 3.5 33 187-219 4-36 (384)
491 3ic5_A Putative saccharopine d 91.6 0.097 3.3E-06 38.4 2.6 34 186-219 5-39 (118)
492 3gpi_A NAD-dependent epimerase 91.6 0.23 7.8E-06 43.1 5.4 33 8-40 4-36 (286)
493 2o3j_A UDP-glucose 6-dehydroge 91.6 0.14 4.7E-06 48.4 4.2 33 8-40 10-44 (481)
494 3axb_A Putative oxidoreductase 91.6 0.11 3.7E-06 48.6 3.5 32 186-217 23-55 (448)
495 3phh_A Shikimate dehydrogenase 91.6 0.2 6.8E-06 43.2 4.8 34 7-40 118-151 (269)
496 3llv_A Exopolyphosphatase-rela 91.6 0.12 4.1E-06 39.6 3.2 34 186-219 6-39 (141)
497 1nyt_A Shikimate 5-dehydrogena 91.5 0.19 6.5E-06 43.5 4.8 34 7-40 119-152 (271)
498 1pjq_A CYSG, siroheme synthase 91.5 0.16 5.4E-06 47.7 4.5 34 7-40 12-45 (457)
499 3mog_A Probable 3-hydroxybutyr 91.5 0.17 5.8E-06 47.7 4.7 33 8-40 6-38 (483)
500 2h78_A Hibadh, 3-hydroxyisobut 91.5 0.14 4.9E-06 45.0 4.0 33 8-40 4-36 (302)
No 1
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=8.5e-42 Score=326.07 Aligned_cols=311 Identities=19% Similarity=0.347 Sum_probs=247.5
Q ss_pred CeEEEECCChHHHHHHHHHhh---cCCC---EEEEeecCCCCcccccC---------------CcCceeeecCCccccCC
Q 016519 8 VEVIIVGAGPSGLATAACLSL---QSIP---YVILERENCYASIWKKY---------------SYDRLRLHLAKQFCQLP 66 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~---~g~~---v~lie~~~~~gg~~~~~---------------~~~~~~~~~~~~~~~~~ 66 (388)
+||+||||||+|+++|..|++ .|++ |+|||+.+.+||.|... .|+.+..+.+...+.++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 99999999999999853 35556666666666666
Q ss_pred CCCCCCC----CCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEE
Q 016519 67 HLPFPSS----YPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLV 142 (388)
Q Consensus 67 ~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li 142 (388)
+++++.. .+.++++.++.+|++++++++++...++++++|++++..++.+.|+|++.++.. |+. .++.||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~-g~~--~~~~~d~VV 159 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTT-DTI--YSEEFDYVV 159 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTT-TEE--EEEEESEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCC-Cce--EEEEcCEEE
Confidence 6654432 256788999999999999999988445899999999987644589998876321 222 578999999
Q ss_pred EeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhh
Q 016519 143 VASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVY 222 (388)
Q Consensus 143 ~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~ 222 (388)
+|||.++.|..|.++|.+.+ .+.++|+..+.+...+.+++|+|||+|.+|+|+|..|++.+.+|++++|++.
T Consensus 160 vAtG~~s~p~~p~ipG~~~~------~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~-- 231 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKF------GGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA-- 231 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTC------CSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC--
T ss_pred ECCCCCCCCccCCCCCcccC------CceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC--
Confidence 99999889999999999887 7888999888777667799999999999999999999999999999999881
Q ss_pred hhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecCceEEEcCe
Q 016519 223 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGIESIRGNE 302 (388)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~ 302 (388)
.++.. ...+|+++..|.++++++
T Consensus 232 -------~~~~~--------------------------------------------------~~~~V~~~~~V~~i~~~~ 254 (464)
T 2xve_A 232 -------PMGYK--------------------------------------------------WPENWDERPNLVRVDTEN 254 (464)
T ss_dssp -------CCCCC--------------------------------------------------CCTTEEECSCEEEECSSE
T ss_pred -------CCCCC--------------------------------------------------CCCceEEcCCeEEEeCCE
Confidence 11100 014777776699998889
Q ss_pred EEeeCCcEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCC-CCCCccCCCceEEEeccccC--cccchhhHHHHHH
Q 016519 303 VIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQS-YPNHWKGKNGLYCVGLSRKG--LYGAAADAQNIAD 379 (388)
Q Consensus 303 v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~vy~~Gd~~~~--~~~a~~~~~~~a~ 379 (388)
|++.||+++++|.||+|||++|+++++........+.+|++... .....++.|+||++||+... ...|..||+++|.
T Consensus 255 V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~qa~~~a~ 334 (464)
T 2xve_A 255 AYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWYARD 334 (464)
T ss_dssp EEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHHHHHHHHH
T ss_pred EEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCcccccccceEecCCCCCEEEEeCcccccchHHHHHHHHHHHH
Confidence 99999999999999999999999865544332222333354211 22345789999999999764 4488899999999
Q ss_pred HhhhccC
Q 016519 380 HINSILS 386 (388)
Q Consensus 380 ~i~~~l~ 386 (388)
+|...+.
T Consensus 335 ~l~G~~~ 341 (464)
T 2xve_A 335 VIMGRLP 341 (464)
T ss_dssp HHTTSSC
T ss_pred HHcCCCC
Confidence 9987653
No 2
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.1e-41 Score=315.35 Aligned_cols=341 Identities=21% Similarity=0.362 Sum_probs=262.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
++||+|||||++|+++|..|+++|++|+|||+.+.+||.|.. .|+.+.+..+.....++.++.+.....|+.+.++.+|
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 379999999999999999999999999999999999999985 5778888888888888888777777778899999999
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEE-EEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
+.++++++++.+ +++++|++++..+ +.|. |.+.+ .+++||+||+|||.++.|..|.++|.+.+
T Consensus 82 l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~~v~~~~---------g~~~~d~vV~AtG~~~~~~~~~~~g~~~~--- 145 (357)
T 4a9w_A 82 LAQYEQKYALPV--LRPIRVQRVSHFG--ERLRVVARDG---------RQWLARAVISATGTWGEAYTPEYQGLESF--- 145 (357)
T ss_dssp HHHHHHHTTCCE--ECSCCEEEEEEET--TEEEEEETTS---------CEEEEEEEEECCCSGGGBCCCCCTTGGGC---
T ss_pred HHHHHHHcCCEE--EcCCEEEEEEECC--CcEEEEEeCC---------CEEEeCEEEECCCCCCCCCCCCCCCcccc---
Confidence 999999999886 9999999999876 6788 87665 68999999999998888989999998887
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhH-HHHHHHHH
Q 016519 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGV-DTLMVMLS 244 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 244 (388)
.+..+|...+.....+.+++++|||+|.+|+|+|..|++.+ +|++++|++. .++|.... ..+..++.
T Consensus 146 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~--------~~~~~~~~~~~~~~~~~ 213 (357)
T 4a9w_A 146 ---AGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEP--------AFLADDVDGRVLFERAT 213 (357)
T ss_dssp ---CSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCC--------CBCCTTCCTHHHHTC--
T ss_pred ---CCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCC--------eecchhhcCccHHHHHH
Confidence 77888888888777778999999999999999999999998 6999999851 22222111 00000000
Q ss_pred HHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecCceEEEcCeEEeeCCcEEeccEEEEccCCCC
Q 016519 245 RLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGIESIRGNEVIFENGHSHHFDSIVFCTGFKR 324 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~~g~~~~~D~vi~atG~~~ 324 (388)
+.+. ......+... .......+.....+.+.+..+.+.....+.+++.+++.+.+|+++++|+||+|||++|
T Consensus 214 ~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 285 (357)
T 4a9w_A 214 ERWK-AQQEGREPDL-------PPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAVIWCTGFRP 285 (357)
T ss_dssp ----------------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTEEECTTSCEEECSEEEECCCBCC
T ss_pred HHHh-ccccccCCCc-------ccccccCcccChhHHHHHhcCceEEecCcceEeCCeeEECCCCEecCCEEEECCCcCC
Confidence 0000 0000000000 0000112334444555566666655555899999999999999999999999999999
Q ss_pred CCcccccCCCCccCCCCCcCCCCC-CCccCCCceEEEe--cccc----CcccchhhHHHHHHHhhhccC
Q 016519 325 STNVWLKGDDSMLNDDGIPKQSYP-NHWKGKNGLYCVG--LSRK----GLYGAAADAQNIADHINSILS 386 (388)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~vy~~G--d~~~----~~~~a~~~~~~~a~~i~~~l~ 386 (388)
++ .++... .+.+++|++.+++. .+.++.||||++| |+++ .+..|..+|+.+|.+|.+.|.
T Consensus 286 ~~-~~l~~~-gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 286 AL-SHLKGL-DLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp CC-GGGTTT-TCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred CC-cccCcc-cccCCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 98 455555 34488899999955 4789999999999 5654 255899999999999998875
No 3
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=3.3e-40 Score=319.56 Aligned_cols=354 Identities=21% Similarity=0.362 Sum_probs=267.3
Q ss_pred CCeEEEECCChHHHHHHHHHh-hcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCC----CCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLS-LQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~-~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 81 (388)
.+||+|||||++|+++|..|+ +.|++|+|||+.+.+||.|..+.|+.+.++.+...+.+...+ .+.+...++++.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 489999999999999999999 899999999999999999999999999999888777766431 112334567889
Q ss_pred HHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc
Q 016519 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS 161 (388)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~ 161 (388)
++.+|++..++++++...++++++|++++.+++.+.|+|++.++ .+++||+||+|||.++.|..|.++|.+.
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--------EVYRAKYVVNAVGLLSAINFPNLPGLDT 159 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--------CEEEEEEEEECCCSCCSBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--------CEEEeCEEEECCcccccCCCCCCCCccc
Confidence 99999999999999855569999999999987667899999876 6799999999999988999999999998
Q ss_pred ccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhh-------hh---HHHhh-c
Q 016519 162 FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVY-------LG---LVLLR-Y 230 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~-------~~---~~~~~-~ 230 (388)
+ .+..+|+..+.+.....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.|- .. ...++ .
T Consensus 160 f------~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~ 233 (540)
T 3gwf_A 160 F------EGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKAD 233 (540)
T ss_dssp C------CSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHT
T ss_pred c------CCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhc
Confidence 8 888999998887777789999999999999999999999999999999999640 00 00000 0
Q ss_pred CChh--------------------------hH-------------------------------HHHHHHHHH---HHhcC
Q 016519 231 VPCG--------------------------GV-------------------------------DTLMVMLSR---LVYGD 250 (388)
Q Consensus 231 ~~~~--------------------------~~-------------------------------~~~~~~~~~---~~~~~ 250 (388)
+|.. .. ....+.+.. ..+.+
T Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d 313 (540)
T 3gwf_A 234 YDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIED 313 (540)
T ss_dssp HHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCS
T ss_pred cHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCC
Confidence 0000 00 000000000 00111
Q ss_pred ccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEe---cC-ceEEEcCeEEeeCCcEEeccEEEEccCCCCCC
Q 016519 251 LSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCTGFKRST 326 (388)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~ 326 (388)
.+......|. ...++++..+..+++.+.+.+|+++ .. |+++++++|+++||+++++|+||+|||+++++
T Consensus 314 p~~~~~l~P~-------~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 314 PETARKLMPK-------GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVD 386 (540)
T ss_dssp HHHHHHHCCC-------SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSS
T ss_pred HHHHHhCCCC-------CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccc
Confidence 1111222222 3566788999999999999999999 45 99999999999999999999999999999986
Q ss_pred cccccCCCCccCCC---------CCcCCCCCCCccCCCceEEE-ecccc---CcccchhhHHHHHHHhhh
Q 016519 327 NVWLKGDDSMLNDD---------GIPKQSYPNHWKGKNGLYCV-GLSRK---GLYGAAADAQNIADHINS 383 (388)
Q Consensus 327 ~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~vy~~-Gd~~~---~~~~a~~~~~~~a~~i~~ 383 (388)
. ++... .+..++ +.+....-...++.||+|++ |+.+. .+..+..|++++++.|..
T Consensus 387 ~-~~~~~-~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~~ 454 (540)
T 3gwf_A 387 G-NYRRI-EIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIGY 454 (540)
T ss_dssp H-HHHTS-EEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHHH
T ss_pred c-CcCcc-eEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 2 22222 111111 23333333455678999998 87543 244777888888877754
No 4
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=6.1e-40 Score=317.98 Aligned_cols=356 Identities=20% Similarity=0.287 Sum_probs=258.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCC----CCCCCCCCCHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (388)
..+||+|||||++|+++|..|++.|++|+|||+++.+||+|..+.|+...++.+...+.+...+. ..+...+++..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 35899999999999999999999999999999999999999999999999988877776643322 23344678899
Q ss_pred HHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc
Q 016519 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS 161 (388)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~ 161 (388)
++.+|++..++++++..+++++++|++++++++.+.|+|++.++ .+++||+||+|||.++.|..|.++|.+.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE--------EVVTCRFLISATGPLSASRMPDIKGIDS 159 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT--------EEEEEEEEEECCCSCBC---CCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC--------CEEEeCEEEECcCCCCCCcCCCCCCccc
Confidence 99999999999999866669999999999987667899999876 7899999999999988999999999998
Q ss_pred ccccCCCCcceeeccCCCCC-------CCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhh-------hhH--
Q 016519 162 FCSSATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVY-------LGL-- 225 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~-------~~~-- 225 (388)
+ .+..+|+..+... ....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.|- ...
T Consensus 160 f------~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~ 233 (545)
T 3uox_A 160 F------KGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEK 233 (545)
T ss_dssp C------CSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHH
T ss_pred c------CCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHH
Confidence 8 8888999887665 55679999999999999999999999999999999999540 000
Q ss_pred -HHh-hcCChhh--------------------------HH-H-----------------------------HHHHHHHH-
Q 016519 226 -VLL-RYVPCGG--------------------------VD-T-----------------------------LMVMLSRL- 246 (388)
Q Consensus 226 -~~~-~~~~~~~--------------------------~~-~-----------------------------~~~~~~~~- 246 (388)
..+ +.+|... .. . +.+.+...
T Consensus 234 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (545)
T 3uox_A 234 MDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKI 313 (545)
T ss_dssp HHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHH
Confidence 000 0000000 00 0 00000000
Q ss_pred --HhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEe---cC-ceEEEcCeEEeeCCcEEeccEEEEcc
Q 016519 247 --VYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCT 320 (388)
Q Consensus 247 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~at 320 (388)
.+.+.+......|. .....++++..+..+++.+.+.+|+++ .. |+++++++|+++|| ++++|+||+||
T Consensus 314 ~~~v~d~~~~~~l~P~-----~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~AT 387 (545)
T 3uox_A 314 RQRVKDPVVAEKLIPK-----DHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYAT 387 (545)
T ss_dssp HHHCSCHHHHHHTSCS-----SSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECC
T ss_pred HHHcCCHHHHHhCCCC-----CCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECC
Confidence 00111111111220 122345677889999999999999999 45 99999999999999 99999999999
Q ss_pred CCCCCCcccccCCCCccCCCCC---------cCCCCCCCccCCCceEEEeccc-c-----CcccchhhHHHHHHHhhh
Q 016519 321 GFKRSTNVWLKGDDSMLNDDGI---------PKQSYPNHWKGKNGLYCVGLSR-K-----GLYGAAADAQNIADHINS 383 (388)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~g~---------~~~~~~~~~~~~~~vy~~Gd~~-~-----~~~~a~~~~~~~a~~i~~ 383 (388)
|+++++. ++... .+..++|. +..-.-...++.||+|.+.-.. . .+..+..|++++++.|..
T Consensus 388 Gf~~~~~-~~~~~-~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~ 463 (545)
T 3uox_A 388 GFDAVTG-SLDRI-DIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISY 463 (545)
T ss_dssp CCBSSSC-SCTTS-EEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc-cCCCc-eEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 9998763 32222 22222332 2222223446789999975332 2 133677788888877754
No 5
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=2.1e-39 Score=315.57 Aligned_cols=357 Identities=21% Similarity=0.324 Sum_probs=264.2
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCC----CCCCCCCCCHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (388)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||.|..+.|+.+.++.+...+.+...+. ..+...|+++.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 35899999999999999999999999999999999999999999999988887776665543220 11223577899
Q ss_pred HHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc
Q 016519 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS 161 (388)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~ 161 (388)
++.+|++.+++++++...++++++|++++++++.+.|+|++.++ .+++||+||+|||.++.|..|.++|.+.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG--------DRIRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC--------CEEEeCEEEECcCCCCCCCCCCCCCccc
Confidence 99999999999998776679999999999887556899998875 6799999999999988999999999988
Q ss_pred ccccCCCCcceeeccCCC-CCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhh-------hH----HHhh
Q 016519 162 FCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYL-------GL----VLLR 229 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~-------~~----~~~~ 229 (388)
+ .+..+|+..+. +...+.+++|+|||+|.+|+|+|..++..+.+|+++.|++.|-. .. .+.+
T Consensus 167 f------~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~ 240 (542)
T 1w4x_A 167 F------AGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKK 240 (542)
T ss_dssp C------CSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHT
T ss_pred C------CCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHh
Confidence 8 88889998876 33456799999999999999999999999999999999985510 00 0000
Q ss_pred cCCh--------------------------hhHHHHHH-----------------------------HHHHH---HhcCc
Q 016519 230 YVPC--------------------------GGVDTLMV-----------------------------MLSRL---VYGDL 251 (388)
Q Consensus 230 ~~~~--------------------------~~~~~~~~-----------------------------~~~~~---~~~~~ 251 (388)
.+|. .....+.. .+... ...+.
T Consensus 241 ~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (542)
T 1w4x_A 241 RYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDP 320 (542)
T ss_dssp THHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSH
T ss_pred hCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCH
Confidence 0000 00000000 00000 00111
Q ss_pred cccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEe---cC-ceEEEcCeEEeeCCcEEeccEEEEccCCCCCCc
Q 016519 252 SKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCTGFKRSTN 327 (388)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~ 327 (388)
+......|. ...+.++++..+.++++.+.+++|+++ .. |+++++++|+++| +++++|+||+|||+++++.
T Consensus 321 ~~~~~l~P~-----~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~~ 394 (542)
T 1w4x_A 321 EVAERLVPK-----GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALTG 394 (542)
T ss_dssp HHHHHHSCC-----SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTTH
T ss_pred HHHHhcCCC-----CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCcccccc
Confidence 111112221 133466788999999999999999997 44 9999999999999 9999999999999999863
Q ss_pred ccccCCCCccCCCCCcCCC---------CCCCccCCCceEEE-ecccc----C-cccchhhHHHHHHHhhhc
Q 016519 328 VWLKGDDSMLNDDGIPKQS---------YPNHWKGKNGLYCV-GLSRK----G-LYGAAADAQNIADHINSI 384 (388)
Q Consensus 328 ~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~vy~~-Gd~~~----~-~~~a~~~~~~~a~~i~~~ 384 (388)
+.... .+..++|..+.+ ........||+|++ |+.+. + +..+..|++++++.|...
T Consensus 395 -~~~~~-~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~ 464 (542)
T 1w4x_A 395 -ALFKI-DIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYM 464 (542)
T ss_dssp -HHHTS-EEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CcCce-eeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 33332 223333433221 12334578999998 99853 2 347889999999998764
No 6
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=5.2e-39 Score=311.74 Aligned_cols=355 Identities=24% Similarity=0.351 Sum_probs=263.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCC----CCCCCCCCCCHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRAQ 82 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 82 (388)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|..+.|+.+.++.+..++.+...+ .+.+...++++.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 479999999999999999999999999999999999999999999999999988887776432 1233456789999
Q ss_pred HHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccc
Q 016519 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSF 162 (388)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~ 162 (388)
+.+|++..++++++..+++++++|++++++++...|+|++.++ .+++||+||+|||.++.|..|.++|.+.+
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~~f 172 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--------DEVSARFLVVAAGPLSNANTPAFDGLDRF 172 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCSEEECCCCCCTTGGGC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC--------CEEEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 9999999999999865669999999999988667899999876 67999999999998889999999999988
Q ss_pred cccCCCCcceeeccCCC-CCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhh-------hh---HHHhh-c
Q 016519 163 CSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVY-------LG---LVLLR-Y 230 (388)
Q Consensus 163 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~-------~~---~~~~~-~ 230 (388)
.+..+|+..+. +...+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.|- .. ...++ .
T Consensus 173 ------~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~ 246 (549)
T 4ap3_A 173 ------TGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQKAN 246 (549)
T ss_dssp ------CSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHHHT
T ss_pred ------CCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHHhc
Confidence 88899999887 4666679999999999999999999999999999999999540 00 00000 0
Q ss_pred CChhh-------------------------------------------------------HHHHHHHHHHHH---hcCcc
Q 016519 231 VPCGG-------------------------------------------------------VDTLMVMLSRLV---YGDLS 252 (388)
Q Consensus 231 ~~~~~-------------------------------------------------------~~~~~~~~~~~~---~~~~~ 252 (388)
+|... .....+.+.... +.+.+
T Consensus 247 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~ 326 (549)
T 4ap3_A 247 YAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPA 326 (549)
T ss_dssp HHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHH
T ss_pred cHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHH
Confidence 00000 000000000000 01111
Q ss_pred ccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEe---cC-ceEEEcCeEEeeCCcEEeccEEEEccCCCCCCcc
Q 016519 253 KYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNV 328 (388)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~ 328 (388)
......|. .....++++..+..+.+.+.+.+|+++ .. |+++++++|+++|| ++++|+||+|||+++++.
T Consensus 327 ~~~~l~P~-----~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~~- 399 (549)
T 4ap3_A 327 VAELLTPK-----DHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMTG- 399 (549)
T ss_dssp HHHHHSCS-----SCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESST-
T ss_pred HHHhCCCC-----CCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCccccccc-
Confidence 11112222 023455678889999999999999999 56 99999999999999 999999999999998762
Q ss_pred cccCCCCccCCCC---------CcCCCCCCCccCCCceEEE-ecccc-----CcccchhhHHHHHHHhhh
Q 016519 329 WLKGDDSMLNDDG---------IPKQSYPNHWKGKNGLYCV-GLSRK-----GLYGAAADAQNIADHINS 383 (388)
Q Consensus 329 ~~~~~~~~~~~~g---------~~~~~~~~~~~~~~~vy~~-Gd~~~-----~~~~a~~~~~~~a~~i~~ 383 (388)
++... .+..++| .+..-.-....+.||+|.+ |.-+. .+..+..|++++++.|..
T Consensus 400 ~~~~~-~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~ 468 (549)
T 4ap3_A 400 SLDKL-EIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAY 468 (549)
T ss_dssp TGGGS-EEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCce-eEECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHH
Confidence 22222 1222222 2222222344678999996 55432 134677788888877653
No 7
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=7.2e-39 Score=305.27 Aligned_cols=309 Identities=23% Similarity=0.355 Sum_probs=235.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCC--CEEEEeecCCCCcccccCC---------------------------------
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYS--------------------------------- 50 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~~~gg~~~~~~--------------------------------- 50 (388)
..+||+||||||+|+++|..|++.|. +|+|||+.+.+||.|....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35899999999999999999999999 9999999999999987542
Q ss_pred cCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCc
Q 016519 51 YDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGR 130 (388)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~ 130 (388)
|..+..+.+..++.+.+++++...+.|+.+.++.+|+++++++++..+ +++++|++++..+ +.|+|++.+... |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i--~~~t~V~~v~~~~--~~~~V~~~~~~~-G~ 159 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFI--KLATDVLDIEKKD--GSWVVTYKGTKA-GS 159 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGE--ECSEEEEEEEEET--TEEEEEEEESST-TC
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeE--EeCCEEEEEEeCC--CeEEEEEeecCC-CC
Confidence 122223333444556666666666778899999999999999886555 8999999998765 779998876211 11
Q ss_pred -eeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhc
Q 016519 131 -VIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHA 209 (388)
Q Consensus 131 -~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~ 209 (388)
. .++.||+||+|||+++.|.+|.++|.+.+. .+..+.++|+..+.+...+.+++|+|||+|.+|+|+|..|++.+
T Consensus 160 ~~--~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~--~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~ 235 (447)
T 2gv8_A 160 PI--SKDIFDAVSICNGHYEVPYIPNIKGLDEYA--KAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVA 235 (447)
T ss_dssp CE--EEEEESEEEECCCSSSSBCBCCCBTHHHHH--HHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTS
T ss_pred ee--EEEEeCEEEECCCCCCCCCCCCCCChhhhh--ccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHh
Confidence 1 489999999999998899999999976430 00035688888887776777999999999999999999999999
Q ss_pred Ce-eEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCc
Q 016519 210 AK-TSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQ 288 (388)
Q Consensus 210 ~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (388)
.+ |++++|++.+ +...+
T Consensus 236 ~~~V~l~~r~~~~--------------------------------------------------------------l~~~~ 253 (447)
T 2gv8_A 236 KHPIYQSLLGGGD--------------------------------------------------------------IQNES 253 (447)
T ss_dssp CSSEEEECTTCCS--------------------------------------------------------------CBCSS
T ss_pred CCcEEEEeCCCCc--------------------------------------------------------------CCCCC
Confidence 99 9999988811 23356
Q ss_pred EEEecCceEEE--cCeEEeeCCcE-EeccEEEEccCCCCCCccc----ccCCCCccCCCCCcCCCCCC--CccCCCceEE
Q 016519 289 IQVLPGIESIR--GNEVIFENGHS-HHFDSIVFCTGFKRSTNVW----LKGDDSMLNDDGIPKQSYPN--HWKGKNGLYC 359 (388)
Q Consensus 289 v~~~~~v~~~~--~~~v~~~~g~~-~~~D~vi~atG~~~~~~~~----~~~~~~~~~~~g~~~~~~~~--~~~~~~~vy~ 359 (388)
|.+...|+++. +..|++.||+. +++|.||+|||++|+++++ +......+..++.+.++... ..++.|+||+
T Consensus 254 i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~ 333 (447)
T 2gv8_A 254 LQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAF 333 (447)
T ss_dssp EEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEE
T ss_pred eEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEE
Confidence 77666688884 45799999987 6999999999999998551 33321222224554444111 1267899999
Q ss_pred EeccccC--cccchhhHHHHHHHhhhcc
Q 016519 360 VGLSRKG--LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 360 ~Gd~~~~--~~~a~~~~~~~a~~i~~~l 385 (388)
+||+... ...|..||+++|.+|...+
T Consensus 334 ~G~~~~~~~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 334 VGLALHVVPFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp SSCCBSSCHHHHHHHHHHHHHHHHTTSS
T ss_pred EeccccccCchHHHHHHHHHHHHHcCCC
Confidence 9999764 4478899999999998765
No 8
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=4.3e-38 Score=288.55 Aligned_cols=296 Identities=17% Similarity=0.290 Sum_probs=229.5
Q ss_pred CcccCCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCC--C
Q 016519 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMF--V 78 (388)
Q Consensus 1 m~~~~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 78 (388)
|.+....+||+|||||++|+++|..|++.|++|+|||+.+.+||.|.. .|+...+. .++.+ .
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~-~~~~~~~~---------------~~~~~~~~ 64 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA-LYPEKYIY---------------DVAGFPKI 64 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH-HCTTSEEC---------------CSTTCSSE
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh-cCCCceEe---------------ccCCCCCC
Confidence 444444589999999999999999999999999999999999998852 12221110 11222 3
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC-CCCCCCCC
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS-NPFTPDIR 157 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s-~p~~~~~~ 157 (388)
...++..++.+.++++++.+ +++++|++++..+ ++.|.|.+.+ .++.+|+||+|||..+ .|..|.++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~---------g~~~~d~vVlAtG~~~~~p~~~~~~ 132 (332)
T 3lzw_A 65 RAQELINNLKEQMAKFDQTI--CLEQAVESVEKQA-DGVFKLVTNE---------ETHYSKTVIITAGNGAFKPRKLELE 132 (332)
T ss_dssp EHHHHHHHHHHHHTTSCCEE--ECSCCEEEEEECT-TSCEEEEESS---------EEEEEEEEEECCTTSCCEECCCCCT
T ss_pred CHHHHHHHHHHHHHHhCCcE--EccCEEEEEEECC-CCcEEEEECC---------CEEEeCEEEECCCCCcCCCCCCCCC
Confidence 57889999999999888776 8899999998875 2478999876 4599999999999533 78888999
Q ss_pred CcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHH
Q 016519 158 GLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVD 237 (388)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~ 237 (388)
|.+.+ .+..+|+ .+.+...+++++++|||+|.+|+|+|..|++.+.+|++++|++.+ .+..
T Consensus 133 g~~~~------~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~---------~~~~--- 193 (332)
T 3lzw_A 133 NAEQY------EGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF---------RAHE--- 193 (332)
T ss_dssp TGGGG------BTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC---------SSCH---
T ss_pred Chhhc------cCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC---------CccH---
Confidence 98876 5556666 555555667899999999999999999999999999999998822 1110
Q ss_pred HHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe----EEeeC----
Q 016519 238 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE----VIFEN---- 307 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~----v~~~~---- 307 (388)
...+.+++.+|+++.+ +.+++.+. +.+.+
T Consensus 194 -----------------------------------------~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g 232 (332)
T 3lzw_A 194 -----------------------------------------HSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGD 232 (332)
T ss_dssp -----------------------------------------HHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSC
T ss_pred -----------------------------------------HHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCC
Confidence 0123355678999887 88887653 77776
Q ss_pred -CcEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEecccc---C---cccchhhHHHHHHH
Q 016519 308 -GHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK---G---LYGAAADAQNIADH 380 (388)
Q Consensus 308 -g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~---~---~~~a~~~~~~~a~~ 380 (388)
++++++|.||+|+|+.|++ .++... .+..++|++.++ +.++++.|||||+|||+. . ...|..+|+.+|.+
T Consensus 233 ~~~~~~~D~vv~a~G~~p~~-~~~~~~-~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~ 309 (332)
T 3lzw_A 233 RKEILEIDDLIVNYGFVSSL-GPIKNW-GLDIEKNSIVVK-STMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNN 309 (332)
T ss_dssp CEEEEECSEEEECCCEECCC-GGGGGS-SCCEETTEEECC-TTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHH
T ss_pred ceEEEECCEEEEeeccCCCc-hHHhhc-CccccCCeEEeC-CCCceecCCEEEccceecCCCCcceEeeehhhHHHHHHH
Confidence 4678999999999999998 455555 233367999998 467789999999999973 2 34889999999999
Q ss_pred hhhccCC
Q 016519 381 INSILSP 387 (388)
Q Consensus 381 i~~~l~~ 387 (388)
|.+.+.+
T Consensus 310 i~~~l~~ 316 (332)
T 3lzw_A 310 AKAYMDP 316 (332)
T ss_dssp HHHHHCT
T ss_pred HHHhhCh
Confidence 9987754
No 9
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.3e-37 Score=277.43 Aligned_cols=281 Identities=16% Similarity=0.190 Sum_probs=217.0
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (388)
+||+|||||++|+++|..|++.|++|+|||+.+..+..+... ..++ .....+..++..++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~-------------~~~~-------~~~~~~~~~~~~~~ 62 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS-------------HGFL-------GQDGKAPGEIIAEA 62 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC-------------CSST-------TCTTCCHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh-------------cCCc-------CCCCCCHHHHHHHH
Confidence 799999999999999999999999999999976443221100 0000 01235678899999
Q ss_pred HHHHHhc-CCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccC
Q 016519 88 DHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (388)
Q Consensus 88 ~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~ 166 (388)
.+.++++ ++. ....+|+.++..+ +.|.|.+.++ .++.||+||+||| +.|..|.++|.+.+
T Consensus 63 ~~~~~~~~~v~---~~~~~v~~i~~~~--~~~~v~~~~g--------~~~~~d~vviAtG--~~~~~~~~~g~~~~---- 123 (297)
T 3fbs_A 63 RRQIERYPTIH---WVEGRVTDAKGSF--GEFIVEIDGG--------RRETAGRLILAMG--VTDELPEIAGLRER---- 123 (297)
T ss_dssp HHHHTTCTTEE---EEESCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCC--CEEECCCCBTTGGG----
T ss_pred HHHHHhcCCeE---EEEeEEEEEEEcC--CeEEEEECCC--------CEEEcCEEEECCC--CCCCCCCCCCchhh----
Confidence 9988887 444 4466899998876 6799998875 6899999999999 57888889888765
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHH
Q 016519 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRL 246 (388)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (388)
.+...+...+.+.....+++++|||+|.+|+|+|..|.+.+ +|+++.+++. .
T Consensus 124 --~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~---------~---------------- 175 (297)
T 3fbs_A 124 --WGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV---------E---------------- 175 (297)
T ss_dssp --BTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---------C----------------
T ss_pred --cCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---------C----------------
Confidence 44455555444444556899999999999999999999998 9999998871 1
Q ss_pred HhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC-ceEEEcC-eEEeeCCcEEeccEEEEccCCCC
Q 016519 247 VYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN-EVIFENGHSHHFDSIVFCTGFKR 324 (388)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~-~v~~~~g~~~~~D~vi~atG~~~ 324 (388)
+...+.+.+++.+|+++.. +.+++.+ .+.+.+|+++++|.||+|+|++|
T Consensus 176 -----------------------------~~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 176 -----------------------------PDADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRI 226 (297)
T ss_dssp -----------------------------CCHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEEC
T ss_pred -----------------------------CCHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCccc
Confidence 1112245566678888865 8888877 79999999999999999999999
Q ss_pred CCcccccCCCCccC--CCC-CcCCCCCCCccCCCceEEEeccccC---cccchhhHHHHHHHhhhccC
Q 016519 325 STNVWLKGDDSMLN--DDG-IPKQSYPNHWKGKNGLYCVGLSRKG---LYGAAADAQNIADHINSILS 386 (388)
Q Consensus 325 ~~~~~~~~~~~~~~--~~g-~~~~~~~~~~~~~~~vy~~Gd~~~~---~~~a~~~~~~~a~~i~~~l~ 386 (388)
++ .++.......+ +.| ++.++ +.++++.|+||++|||+.. ...|..+|+.+|.+|.+.|.
T Consensus 227 ~~-~~~~~~g~~~~~~~~G~~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 227 TV-DWIEKLGCAVEEGPMGSTIVTD-PMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp CC-SCHHHHTCCEEEETTEEEECCC-TTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-hhHHhcCCccccCCCCceEEeC-CCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHh
Confidence 98 45554422233 457 78888 5577899999999999874 44899999999999988764
No 10
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=6.6e-37 Score=279.50 Aligned_cols=284 Identities=17% Similarity=0.250 Sum_probs=220.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.+||+|||||++|+++|..|++.|++|+|||++ .||.|..... ...++.+ ......++.++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~~~ 75 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGI----------VDDYLGL-------IEIQASDMIKV 75 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCE----------ECCSTTS-------TTEEHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeeccccc----------ccccCCC-------CCCCHHHHHHH
Confidence 479999999999999999999999999999998 7887764210 0011111 11456889999
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~ 166 (388)
+.+.++++++++ ++ .+|++++..+ +.|.+.+.++ .++.||+||+||| +.|..|.++|.+.+
T Consensus 76 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g--------~~~~~d~lvlAtG--~~~~~~~i~g~~~~---- 136 (323)
T 3f8d_A 76 FNKHIEKYEVPV--LL-DIVEKIENRG--DEFVVKTKRK--------GEFKADSVILGIG--VKRRKLGVPGEQEF---- 136 (323)
T ss_dssp HHHHHHTTTCCE--EE-SCEEEEEEC----CEEEEESSS--------CEEEEEEEEECCC--CEECCCCCTTTTTT----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEecC--CEEEEEECCC--------CEEEcCEEEECcC--CCCccCCCCchhhh----
Confidence 999999998886 66 8899998765 6788988775 6899999999999 56888888888765
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHH
Q 016519 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRL 246 (388)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (388)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|+++++++. +++..
T Consensus 137 --~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~---------~~~~~------------ 193 (323)
T 3f8d_A 137 --AGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT---------FKAQP------------ 193 (323)
T ss_dssp --BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS---------CCSCH------------
T ss_pred --cCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC---------CCcCH------------
Confidence 4445555444444455689999999999999999999999999999999982 22210
Q ss_pred HhcCccccccCCCCCCchhhhhccCCcceeCcchhh-hhcCCcEEEecC--ceEEEcC----eEEeeC---Cc--EEecc
Q 016519 247 VYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCE-KIKSGQIQVLPG--IESIRGN----EVIFEN---GH--SHHFD 314 (388)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~--v~~~~~~----~v~~~~---g~--~~~~D 314 (388)
.+.+ ..+..+|+++.+ +.+++.+ .+.+.+ |+ ++++|
T Consensus 194 --------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D 241 (323)
T 3f8d_A 194 --------------------------------IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVN 241 (323)
T ss_dssp --------------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECS
T ss_pred --------------------------------HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcC
Confidence 1122 233459999988 8888765 477776 76 78999
Q ss_pred EEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC------cccchhhHHHHHHHhhhcc
Q 016519 315 SIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 315 ~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~------~~~a~~~~~~~a~~i~~~l 385 (388)
.||+|+|++|++ .++.......+++|++.+| +.++++.||||++|||+.. ...|..+|+.+|.+|.+.+
T Consensus 242 ~vv~a~G~~p~~-~~~~~~g~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l 316 (323)
T 3f8d_A 242 GVFIEIGFDPPT-DFAKSNGIETDTNGYIKVD-EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYV 316 (323)
T ss_dssp EEEECCCEECCH-HHHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCh-hHHhhcCeeecCCCcEecC-CCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHH
Confidence 999999999997 4555553445778999999 5677899999999999874 3489999999999998876
No 11
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=1.5e-36 Score=277.52 Aligned_cols=287 Identities=19% Similarity=0.284 Sum_probs=214.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.+||+||||||+|+++|..|++.|++|+|||+. ..||.|..... +..++. ++......++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE----------VENFPG------FPEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----------BCCSTT------CSSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc----------cccCCC------CCCCCCHHHHHHH
Confidence 489999999999999999999999999999998 67877653210 001111 1123467788999
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCC-cEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATN-MWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
+.+.+++++++. +. .+|++++.....+ .|.|.+.++ .+++||+||+||| +.|..|.++|.+.+
T Consensus 71 l~~~~~~~gv~~--~~-~~v~~i~~~~~~~~~~~v~~~~g--------~~~~~~~vv~AtG--~~~~~~~i~g~~~~--- 134 (325)
T 2q7v_A 71 MHQQAEKFGAKV--EM-DEVQGVQHDATSHPYPFTVRGYN--------GEYRAKAVILATG--ADPRKLGIPGEDNF--- 134 (325)
T ss_dssp HHHHHHHTTCEE--EE-CCEEEEEECTTSSSCCEEEEESS--------CEEEEEEEEECCC--EEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCEE--Ee-eeEEEEEeccCCCceEEEEECCC--------CEEEeCEEEECcC--CCcCCCCCCChhhc---
Confidence 999999988875 55 6888888751013 377877664 6899999999999 57888888887655
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHH
Q 016519 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSR 245 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (388)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|++++|++.+ ...
T Consensus 135 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~---------~~~------------ 190 (325)
T 2q7v_A 135 ---WGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTL---------RAN------------ 190 (325)
T ss_dssp ---BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC---------CSC------------
T ss_pred ---cCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcC---------Ccc------------
Confidence 44444544333333445789999999999999999999999999999998822 110
Q ss_pred HHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhh-cCCcEEEecC--ceEEEcC----eEEee---CCc--EEec
Q 016519 246 LVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKI-KSGQIQVLPG--IESIRGN----EVIFE---NGH--SHHF 313 (388)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--v~~~~~~----~v~~~---~g~--~~~~ 313 (388)
..+.+.+ +..+|+++.+ +.++..+ ++.+. +|+ ++++
T Consensus 191 --------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~ 238 (325)
T 2q7v_A 191 --------------------------------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELAT 238 (325)
T ss_dssp --------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEEC
T ss_pred --------------------------------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEc
Confidence 0011223 3468999888 8888755 56775 675 7899
Q ss_pred cEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhhhcc
Q 016519 314 DSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 314 D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l 385 (388)
|.||+|+|++||+ .++... ...+++|++.+|+ .++++.|+||++|||+.. ...|+.+|+.+|.+|.+.|
T Consensus 239 D~vi~a~G~~p~~-~~l~~~-~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 311 (325)
T 2q7v_A 239 DGVFIFIGHVPNT-AFVKDT-VSLRDDGYVDVRD-EIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQL 311 (325)
T ss_dssp SEEEECSCEEESC-GGGTTT-SCBCTTSCBCCBT-TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEccCCCCCh-HHHhhh-cccCCCccEecCC-CCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 455544 3346789999984 577899999999999864 3489999999999998865
No 12
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=2.3e-37 Score=284.35 Aligned_cols=293 Identities=15% Similarity=0.209 Sum_probs=222.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeec----CCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERE----NCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~----~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
..+||+|||||++|+++|..|++.|++|+|||+. ...||.|..... ...++ .++.+....
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~----------~~~~~------~~~~~~~~~ 84 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTE----------IENFP------GFPDGLTGS 84 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSE----------ECCST------TCTTCEEHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchh----------hcccC------CCcccCCHH
Confidence 4589999999999999999999999999999994 477887764310 00111 112345678
Q ss_pred HHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc
Q 016519 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS 161 (388)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~ 161 (388)
++..++.+.++++++++ ++++ |++++... +.|.+.+..... . .++.+|+||+|+| +.|..|.++|.+.
T Consensus 85 ~~~~~~~~~~~~~gv~i--~~~~-v~~i~~~~--~~~~v~~~~~~~--~---~~~~~d~vvlAtG--~~~~~~~~~g~~~ 152 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEI--ITET-VSKVDLSS--KPFKLWTEFNED--A---EPVTTDAIILATG--ASAKRMHLPGEET 152 (338)
T ss_dssp HHHHHHHHHHHHTTCEE--ECSC-EEEEECSS--SSEEEEETTCSS--S---CCEEEEEEEECCC--EEECCCCCTTHHH
T ss_pred HHHHHHHHHHHHcCCEE--EEeE-EEEEEEcC--CEEEEEEEecCC--C---cEEEeCEEEECcC--CCcCCCCCCCchh
Confidence 99999999999998876 7777 98888765 778887753210 1 6789999999999 5788888998776
Q ss_pred ccccCCCCcceeeccCCCCCC--CCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHH
Q 016519 162 FCSSATGTGEVIHSTQYKNGK--PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTL 239 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
+ ....++........ ...+++++|||+|.+|+|+|..|.+.+.+|++++|++.+ ++.
T Consensus 153 ~------~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~---------~~~------ 211 (338)
T 3itj_A 153 Y------WQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL---------RAS------ 211 (338)
T ss_dssp H------BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC---------CSC------
T ss_pred c------cCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc---------CCC------
Confidence 5 44445544332222 446899999999999999999999999999999998822 220
Q ss_pred HHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhc-CCcEEEecC--ceEEEcCe-----EEeeC----
Q 016519 240 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIK-SGQIQVLPG--IESIRGNE-----VIFEN---- 307 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~--v~~~~~~~-----v~~~~---- 307 (388)
..+.+.+. ..+|+++.+ +.+++.+. +.+.+
T Consensus 212 --------------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g 253 (338)
T 3itj_A 212 --------------------------------------TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKN 253 (338)
T ss_dssp --------------------------------------HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTT
T ss_pred --------------------------------------HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCC
Confidence 11123343 359999988 88887653 77766
Q ss_pred -CcEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhh
Q 016519 308 -GHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHIN 382 (388)
Q Consensus 308 -g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~ 382 (388)
++++++|.||+|+|+.|+. .++.. ....+++|++.+++..++++.|+||++|||+.. +..|+.+|+.+|.+|.
T Consensus 254 ~~~~i~~D~vi~a~G~~p~~-~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 254 EETDLPVSGLFYAIGHTPAT-KIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp EEEEEECSEEEECSCEEECC-GGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCEEEEEeCCCCCh-hHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHH
Confidence 4678999999999999998 44444 234577899997668888999999999999863 4489999999999999
Q ss_pred hccCC
Q 016519 383 SILSP 387 (388)
Q Consensus 383 ~~l~~ 387 (388)
+.|..
T Consensus 332 ~~l~~ 336 (338)
T 3itj_A 332 KYLTS 336 (338)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 98754
No 13
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=1.2e-36 Score=276.39 Aligned_cols=286 Identities=22% Similarity=0.298 Sum_probs=215.3
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC-CEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
+||+||||||+|+++|..|++.|+ +|+|||+. ..||.|..... ...++. ++...+..++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE----------IENYPG------VKEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC----------BCCSTT------CCSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc----------cccCCC------CcccCCHHHHHHH
Confidence 699999999999999999999999 99999995 56776653210 001111 1223577889999
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~ 166 (388)
+.+.+++.+++. ++ .+|++++..+ +.|.|.+.++ .++++|+||+||| +.|..|+++|.+.+
T Consensus 65 l~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g--------~~~~~~~vv~AtG--~~~~~~~~~g~~~~---- 125 (311)
T 2q0l_A 65 WQEQCFRFGLKH--EM-TAVQRVSKKD--SHFVILAEDG--------KTFEAKSVIIATG--GSPKRTGIKGESEY---- 125 (311)
T ss_dssp HHHHHHTTSCEE--EC-SCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCC--EEECCCCCBTHHHH----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEEcC--CEEEEEEcCC--------CEEECCEEEECCC--CCCCCCCCCChhhc----
Confidence 999888888775 65 7899998865 6788877664 6899999999999 57888888887654
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHH
Q 016519 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRL 246 (388)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (388)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|++++|++.+. .
T Consensus 126 --~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------~-------------- 180 (311)
T 2q0l_A 126 --WGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---------C-------------- 180 (311)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---------S--------------
T ss_pred --cCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---------C--------------
Confidence 333444433333333457999999999999999999999999999999988220 0
Q ss_pred HhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhc-CCcEEEecC--ceEEEcC-----eEEee---CCc--EEec
Q 016519 247 VYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIK-SGQIQVLPG--IESIRGN-----EVIFE---NGH--SHHF 313 (388)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~--v~~~~~~-----~v~~~---~g~--~~~~ 313 (388)
...+.+.+. +.+|+++.+ +.+++.+ .+.+. +|+ ++++
T Consensus 181 ------------------------------~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~ 230 (311)
T 2q0l_A 181 ------------------------------APITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVV 230 (311)
T ss_dssp ------------------------------CHHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEEC
T ss_pred ------------------------------CHHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEec
Confidence 001123333 468999887 7787654 46666 675 7899
Q ss_pred cEEEEccCCCCCCcccccCCC----CccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhhhcc
Q 016519 314 DSIVFCTGFKRSTNVWLKGDD----SMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 314 D~vi~atG~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l 385 (388)
|.||+|+|++|++ .++.... ...+++|++.+| +.++++.|+||++|||+.. ...|+.||+.+|.+|.+.|
T Consensus 231 D~vi~a~G~~p~~-~~l~~~g~~~~l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 231 PGFFIFVGYDVNN-AVLKQEDNSMLCKCDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYL 308 (311)
T ss_dssp SEEEECSCEEECC-GGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCccCh-hhhhcccccceeEeccCCCEEeC-CccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999998 4544442 234678999998 4577899999999999874 3489999999999998876
Q ss_pred C
Q 016519 386 S 386 (388)
Q Consensus 386 ~ 386 (388)
.
T Consensus 309 ~ 309 (311)
T 2q0l_A 309 E 309 (311)
T ss_dssp H
T ss_pred h
Confidence 3
No 14
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-36 Score=279.77 Aligned_cols=296 Identities=20% Similarity=0.308 Sum_probs=220.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++...+ +..+.+ + .....++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~~------~~~~~~------~-~~~~~~~~~~ 70 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKYI------YDVAGF------P-KVYAKDLVKG 70 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSEE------CCSTTC------S-SEEHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCcee------eccCCC------C-CCCHHHHHHH
Confidence 4899999999999999999999999999999999999887532 221111 111111 1 1346788888
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC-CCCCCCCCCccccccc
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS-NPFTPDIRGLSSFCSS 165 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s-~p~~~~~~g~~~~~~~ 165 (388)
+.+.++++++.. +++++|+.++..+ +.|.|.+.++ .++++|+||+|||..+ .|..|+++|.+.+
T Consensus 71 l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~v~~~~g--------~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~--- 135 (335)
T 2zbw_A 71 LVEQVAPFNPVY--SLGERAETLEREG--DLFKVTTSQG--------NAYTAKAVIIAAGVGAFEPRRIGAPGEREF--- 135 (335)
T ss_dssp HHHHHGGGCCEE--EESCCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCTTSEEEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEECC--CEEEEEECCC--------CEEEeCEEEECCCCCCCCCCCCCCCChhhc---
Confidence 888888888766 8899999998875 4788888664 5899999999999633 5777888887655
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHH
Q 016519 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSR 245 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (388)
.+..++.. +.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++. +++.. ..
T Consensus 136 ---~~~~~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~---------~~~~~---~~------ 193 (335)
T 2zbw_A 136 ---EGRGVYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ---------FRAHE---AS------ 193 (335)
T ss_dssp ---BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS---------CCSCH---HH------
T ss_pred ---cCcEEEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc---------cCccH---HH------
Confidence 33223222 2233344689999999999999999999999999999999983 22211 00
Q ss_pred HHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC----eEEee---CC--cEEecc
Q 016519 246 LVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVIFE---NG--HSHHFD 314 (388)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~---~g--~~~~~D 314 (388)
...+.+.+++.+|+++.+ +.+++.+ .+.+. +| +++++|
T Consensus 194 -------------------------------~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D 242 (335)
T 2zbw_A 194 -------------------------------VKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVD 242 (335)
T ss_dssp -------------------------------HHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECS
T ss_pred -------------------------------HHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecC
Confidence 011235566678999988 8888765 57776 77 578999
Q ss_pred EEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC------cccchhhHHHHHHHhhhccCC
Q 016519 315 SIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------LYGAAADAQNIADHINSILSP 387 (388)
Q Consensus 315 ~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~------~~~a~~~~~~~a~~i~~~l~~ 387 (388)
.||+|+|++|+++ ++... .+....|++.+|+ .++++.|+||++|||+.. ...|+.+|..+|.+|.+.+.+
T Consensus 243 ~vi~a~G~~p~~~-~l~~~-~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (335)
T 2zbw_A 243 AVLILAGYITKLG-PLANW-GLALEKNKIKVDT-TMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANP 318 (335)
T ss_dssp EEEECCCEEEECG-GGGGS-CCCEETTEEECCT-TCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred EEEEeecCCCCch-Hhhhc-ceeccCCeeeeCC-CCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHHHhhh
Confidence 9999999999984 55544 2322378898884 667899999999999852 337889999999999987754
No 15
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.5e-36 Score=273.59 Aligned_cols=285 Identities=18% Similarity=0.247 Sum_probs=195.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccc-ccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW-KKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
..|||+||||||||++||..|+++|++|+|||+.. +||.. +..+.+ .++.+ ......++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i~-----------~~p~~-------~~~~~~~~~ 65 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANTEEVE-----------NFPGF-------EMITGPDLS 65 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBC-----------CSTTC-------SSBCHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCeeecccccC-----------CcCCc-------cccchHHHH
Confidence 35999999999999999999999999999999864 55533 222111 11111 123456666
Q ss_pred HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
........+..... .....+...... ... +...++ .+++||+||+||| ++|..|++||.+.+
T Consensus 66 ~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~-~~~~~~--------~~~~~d~liiAtG--s~~~~~~ipG~~~~-- 127 (312)
T 4gcm_A 66 TKMFEHAKKFGAVY--QYGDIKSVEDKG---EYK-VINFGN--------KELTAKAVIIATG--AEYKKIGVPGEQEL-- 127 (312)
T ss_dssp HHHHHHHHHTTCEE--EECCCCEEEECS---SCE-EEECSS--------CEEEEEEEEECCC--EEECCCCCTTTTTT--
T ss_pred HHHHHHHhhccccc--cceeeeeeeeee---cce-eeccCC--------eEEEeceeEEccc--CccCcCCCCChhhh--
Confidence 66666666655443 444444333321 222 333333 7899999999999 68999999998876
Q ss_pred cCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHH
Q 016519 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLS 244 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (388)
.+..++.....+...+++++++|||+|++|+|+|..|++.|.+|++++|++ ++++.....
T Consensus 128 ----~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~---------~~~~~~~~~------- 187 (312)
T 4gcm_A 128 ----GGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD---------ELRAQRILQ------- 187 (312)
T ss_dssp ----BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS---------SCCSCHHHH-------
T ss_pred ----CCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc---------ccCcchhHH-------
Confidence 555555554444455668999999999999999999999999999999998 333322111
Q ss_pred HHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEE--cC---e--E-E--eeCCcEEe
Q 016519 245 RLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR--GN---E--V-I--FENGHSHH 312 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~--~~---~--v-~--~~~g~~~~ 312 (388)
...+...++..... +.... .. . . . ..++..++
T Consensus 188 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (312)
T 4gcm_A 188 ------------------------------------DRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHE 231 (312)
T ss_dssp ------------------------------------HHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred ------------------------------------HHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEe
Confidence 11122233333333 11111 10 0 1 1 12345789
Q ss_pred ccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhhhccC
Q 016519 313 FDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSILS 386 (388)
Q Consensus 313 ~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l~ 386 (388)
+|.|++++|..|+. .+.... .+.+++|++.+| +.++|+.|||||+|||+.. +..|+.+|+.+|.+|.++|+
T Consensus 232 ~d~v~~~~g~~~~~-~~~~~~-g~~~~~G~I~vd-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 232 ADGVFIYIGMKPLT-APFKDL-GITNDVGYIVTK-DDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp CSEEEECSCEEESC-GGGGGG-TCBCTTSCBCCC-TTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEeecCCCcCc-hhHHhc-ceecCCCeEeeC-CCCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 555555 456778999988 6778999999999999863 34799999999999988763
No 16
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=7.5e-36 Score=271.10 Aligned_cols=287 Identities=18% Similarity=0.256 Sum_probs=214.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
++||+||||||+|+++|..|++.|++|+|||+ ..||.|.... .++.+. ...+....++.++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~-------------~~~~~~----~~~~~~~~~~~~~ 61 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV-------------DIENYI----SVPKTEGQKLAGA 61 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC-------------EECCBT----TBSSEEHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc-------------cccccc----CcCCCCHHHHHHH
Confidence 37999999999999999999999999999986 4677775321 000000 0113456788899
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCC-CCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
+++.+++++++. +++++|+.++.... .+.|.|.+.++ .+++||+||+||| +.|..|.++|.+.+
T Consensus 62 ~~~~~~~~~v~~--~~~~~v~~i~~~~~~~~~~~v~~~~g--------~~~~~~~lv~AtG--~~~~~~~~~g~~~~--- 126 (310)
T 1fl2_A 62 LKVHVDEYDVDV--IDSQSASKLIPAAVEGGLHQIETASG--------AVLKARSIIVATG--AKWRNMNVPGEDQY--- 126 (310)
T ss_dssp HHHHHHTSCEEE--ECSCCEEEEECCSSTTCCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCeE--EccCEEEEEEecccCCceEEEEECCC--------CEEEeCEEEECcC--CCcCCCCCCChhhc---
Confidence 999998888776 88889999976532 24788988765 5899999999999 56777888887655
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHH
Q 016519 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSR 245 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (388)
.+..++...........+++++|||+|.+|+|+|..|++.+.+|++++|++.+. .
T Consensus 127 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------~------------- 181 (310)
T 1fl2_A 127 ---RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---------A------------- 181 (310)
T ss_dssp ---BTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---------S-------------
T ss_pred ---ccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---------c-------------
Confidence 333344433222233458899999999999999999999999999999988320 0
Q ss_pred HHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcC-CcEEEecC--ceEEEcC-----eEEeeC---Cc--EEe
Q 016519 246 LVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKS-GQIQVLPG--IESIRGN-----EVIFEN---GH--SHH 312 (388)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~~~-----~v~~~~---g~--~~~ 312 (388)
+..+.+.+++ .+|+++.+ +.++..+ .+.+.+ |+ +++
T Consensus 182 -------------------------------~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~ 230 (310)
T 1fl2_A 182 -------------------------------DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIE 230 (310)
T ss_dssp -------------------------------CHHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEE
T ss_pred -------------------------------cHHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEE
Confidence 0111233444 68999888 8888754 466654 53 689
Q ss_pred ccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc----ccchhhHHHHHHHhhhccC
Q 016519 313 FDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL----YGAAADAQNIADHINSILS 386 (388)
Q Consensus 313 ~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~----~~a~~~~~~~a~~i~~~l~ 386 (388)
+|.||+|+|++||+ .++... ...+++|++.+|+ .++++.|+||++|||+... ..|+.+|+.+|.+|.+.|.
T Consensus 231 ~D~vi~a~G~~p~~-~~l~~~-l~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 231 LAGIFVQIGLLPNT-NWLEGA-VERNRMGEIIIDA-KCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp CSEEEECSCEEESC-GGGTTT-SCBCTTSCBCCCT-TCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEeeCCccCc-hHHhcc-ccccCCCcEEcCC-CCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHH
Confidence 99999999999998 454443 3346789999985 4568999999999998753 4799999999999988763
No 17
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=6.9e-36 Score=271.83 Aligned_cols=290 Identities=20% Similarity=0.292 Sum_probs=218.2
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEE-EeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVI-LERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~l-ie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
..+||+|||||++|+++|..|++.|++|+| +|+ +.+||.|..... +..++ .++.+....++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~~~~~------~~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------IENYP------GVAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------BCCST------TCCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------eccCC------CCCCCCCHHHHH
Confidence 458999999999999999999999999999 999 667887753311 00011 112245778999
Q ss_pred HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
.++++++++++++. +++ +|+++ .++..+.|.+..... .++.+|+||+||| +.|..|.++|.+.+
T Consensus 66 ~~~~~~~~~~~v~~--~~~-~v~~i-~~~~~~~~~v~~~~~--------~~~~~d~lvlAtG--~~~~~~~~~g~~~~-- 129 (315)
T 3r9u_A 66 APWSEQCMRFGLKH--EMV-GVEQI-LKNSDGSFTIKLEGG--------KTELAKAVIVCTG--SAPKKAGFKGEDEF-- 129 (315)
T ss_dssp HHHHHHHTTTCCEE--ECC-CEEEE-EECTTSCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCBTTTTT--
T ss_pred HHHHHHHHHcCcEE--EEE-EEEEE-ecCCCCcEEEEEecC--------CEEEeCEEEEeeC--CCCCCCCCCChhhc--
Confidence 99999999998875 666 88888 543225677534332 4789999999999 58888889888765
Q ss_pred cCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHH
Q 016519 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLS 244 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (388)
.+..++...........+++++|||+|.+|+|+|..|.+.+.+|+++++++.+ ....
T Consensus 130 ----~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~---------~~~~---------- 186 (315)
T 3r9u_A 130 ----FGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF---------RAAP---------- 186 (315)
T ss_dssp ----BTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC---------BSCH----------
T ss_pred ----CCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC---------CCCH----------
Confidence 55556655444444456899999999999999999999999999999998832 1000
Q ss_pred HHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe-----EEee--CCc--EEec
Q 016519 245 RLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-----VIFE--NGH--SHHF 313 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-----v~~~--~g~--~~~~ 313 (388)
..+.+.+++.+|+++.+ +.+++.+. +.+. +|+ ++++
T Consensus 187 ---------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~ 233 (315)
T 3r9u_A 187 ---------------------------------STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNV 233 (315)
T ss_dssp ---------------------------------HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECC
T ss_pred ---------------------------------HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeec
Confidence 00123345679999987 88876543 6666 776 7899
Q ss_pred cEEEEccCCCCCCcccccC---CC-CccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhhhcc
Q 016519 314 DSIVFCTGFKRSTNVWLKG---DD-SMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 314 D~vi~atG~~~~~~~~~~~---~~-~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l 385 (388)
|.||+|+|++|++ .+... .. ...+++|++.+|. .++++.|+||++|||+.. +..|+.+|+.+|.+|.+.|
T Consensus 234 D~vv~a~G~~p~~-~~~~~~~~~g~l~~~~~g~i~vd~-~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 234 PGIFTFVGLNVRN-EILKQDDSKFLCNMEEGGQVSVDL-KMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp SCEEECSCEEECC-GGGBCTTSCBSSCBCTTSCBCCCT-TCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCc-hhhhcccccceeeecCCCcEEeCC-CcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHHH
Confidence 9999999999998 44433 21 3346789999994 777899999999999742 4489999999999999876
Q ss_pred C
Q 016519 386 S 386 (388)
Q Consensus 386 ~ 386 (388)
.
T Consensus 312 ~ 312 (315)
T 3r9u_A 312 E 312 (315)
T ss_dssp H
T ss_pred H
Confidence 4
No 18
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=7.9e-36 Score=276.72 Aligned_cols=297 Identities=21% Similarity=0.274 Sum_probs=218.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.+||+||||||+|+++|..|++.|++|+|||+.+.+||.|... ++... ++..+.+ + .....++.++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~------~-~~~~~~~~~~ 79 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKH------IYDVAGF------P-EVPAIDLVES 79 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSE------ECCSTTC------S-SEEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCcc------cccCCCC------C-CCCHHHHHHH
Confidence 4799999999999999999999999999999999999887532 11111 0111110 1 1356788888
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC-CCCCCCCCC-cccccc
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS-NPFTPDIRG-LSSFCS 164 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s-~p~~~~~~g-~~~~~~ 164 (388)
+.+.++++++.+ +++++|+.++..+ ++.|.|.+.++ .+++||+||+|||..+ .|..|.++| .+.+
T Consensus 80 l~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~g--------~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~-- 146 (360)
T 3ab1_A 80 LWAQAERYNPDV--VLNETVTKYTKLD-DGTFETRTNTG--------NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHL-- 146 (360)
T ss_dssp HHHHHHTTCCEE--ECSCCEEEEEECT-TSCEEEEETTS--------CEEEEEEEEECCTTCSCCBCCCGGGCCCTTT--
T ss_pred HHHHHHHhCCEE--EcCCEEEEEEECC-CceEEEEECCC--------cEEEeeEEEEccCCCcCCCCCCCCCCchhhC--
Confidence 988888888765 8899999998764 23788988765 6899999999999644 577777777 5544
Q ss_pred cCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHH
Q 016519 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLS 244 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (388)
.+..++.. +.+...+.+++++|||+|.+|+|+|..|.+.+.+|++++|++.+ .+..
T Consensus 147 ----~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~---------~~~~---------- 202 (360)
T 3ab1_A 147 ----TGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF---------QGHG---------- 202 (360)
T ss_dssp ----BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC---------SSCS----------
T ss_pred ----cCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCC---------CCCH----------
Confidence 33323322 22333446899999999999999999999999999999998822 1110
Q ss_pred HHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-----eEEee--CC--cEEec
Q 016519 245 RLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIFE--NG--HSHHF 313 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~--~g--~~~~~ 313 (388)
.....+.+.+++.+|+++.+ +.+++.+ .+.+. +| +++++
T Consensus 203 ------------------------------~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~ 252 (360)
T 3ab1_A 203 ------------------------------KTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEA 252 (360)
T ss_dssp ------------------------------HHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEEC
T ss_pred ------------------------------HHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeC
Confidence 00111234455678999988 7787653 56665 77 57899
Q ss_pred cEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC------cccchhhHHHHHHHhhhccCC
Q 016519 314 DSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------LYGAAADAQNIADHINSILSP 387 (388)
Q Consensus 314 D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~------~~~a~~~~~~~a~~i~~~l~~ 387 (388)
|.||+|+|+.|++ .++.......+ +|++.+|+ .++++.|+||++|||+.. ...|..+|..+|.+|.+.+.+
T Consensus 253 D~vi~a~G~~p~~-~~l~~~~~~~~-~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 329 (360)
T 3ab1_A 253 DRLLILIGFKSNL-GPLARWDLELY-ENALVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKP 329 (360)
T ss_dssp SEEEECCCBCCSC-GGGGGSSCCEE-TTEEECCT-TSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHHHSC
T ss_pred CEEEECCCCCCCH-HHHHhhccccc-cCeeeecC-CCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhhcCC
Confidence 9999999999998 45555422234 78898884 667899999999999852 337889999999999987754
No 19
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-35 Score=273.26 Aligned_cols=286 Identities=16% Similarity=0.224 Sum_probs=212.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
..+||+||||||+|+++|..|++.|++|+|||+. ..||.|..... ...++. ++......++.+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~ 75 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPG------FRNGITGPELMD 75 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTT------CTTCBCHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCC------CCCCCCHHHHHH
Confidence 3589999999999999999999999999999975 56776643210 001111 111245678889
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEE-EEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNV-KASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
++.+.+++++++. ++++ |.+++. . +.|+| .+.++ .+++||+||+||| +.|..|.++|.+.+
T Consensus 76 ~l~~~~~~~~v~~--~~~~-v~~i~~-~--~~~~v~~~~~g--------~~~~~d~lviAtG--~~~~~~~i~g~~~~-- 137 (335)
T 2a87_A 76 EMREQALRFGADL--RMED-VESVSL-H--GPLKSVVTADG--------QTHRARAVILAMG--AAARYLQVPGEQEL-- 137 (335)
T ss_dssp HHHHHHHHTTCEE--ECCC-EEEEEC-S--SSSEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTHHHHT--
T ss_pred HHHHHHHHcCCEE--EEee-EEEEEe-C--CcEEEEEeCCC--------CEEEeCEEEECCC--CCccCCCCCchHhc--
Confidence 9998888888775 6776 888876 3 56778 66654 6899999999999 57888888887654
Q ss_pred cCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHH
Q 016519 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLS 244 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (388)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|++++|++.+ ...
T Consensus 138 ----~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~---------~~~----------- 193 (335)
T 2a87_A 138 ----LGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF---------RAS----------- 193 (335)
T ss_dssp ----BTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC---------SSC-----------
T ss_pred ----cCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC---------Ccc-----------
Confidence 33344443222222345899999999999999999999999999999998822 110
Q ss_pred HHHhcCccccccCCCCCCchhhhhccCCcceeCcchh-hhhcCCcEEEecC--ceEEEcCe----EEee---CC--cEEe
Q 016519 245 RLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTC-EKIKSGQIQVLPG--IESIRGNE----VIFE---NG--HSHH 312 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~--v~~~~~~~----v~~~---~g--~~~~ 312 (388)
..+. +.+++.+|+++.+ +.+++.+. +.+. +| ++++
T Consensus 194 ---------------------------------~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~ 240 (335)
T 2a87_A 194 ---------------------------------KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLP 240 (335)
T ss_dssp ---------------------------------TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEEC
T ss_pred ---------------------------------HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEee
Confidence 0111 2345679999988 88887653 7665 35 5789
Q ss_pred ccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhhhcc
Q 016519 313 FDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 313 ~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l 385 (388)
+|.||+|+|++|+++ ++... ...+++|++.+++..+.++.|+||++|||+.. ...|..+|+.+|.+|.+.|
T Consensus 241 ~D~vi~a~G~~p~~~-~~~~~-l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l 315 (335)
T 2a87_A 241 VTGVFVAIGHEPRSG-LVREA-IDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWL 315 (335)
T ss_dssp CSCEEECSCEEECCT-TTBTT-BCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEccCCccChh-Hhhcc-cccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHh
Confidence 999999999999984 44422 23467899999966678999999999999875 3478999999999998865
No 20
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.4e-35 Score=270.37 Aligned_cols=286 Identities=18% Similarity=0.306 Sum_probs=211.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.+||+||||||+|+++|..|++.|++|+|||+. ..||.|..... +..++. + ......++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~-~~~~~~~~~~~ 77 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPL----------VENYLG------F-KSIVGSELAKL 77 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSC----------BCCBTT------B-SSBCHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccch----------hhhcCC------C-cccCHHHHHHH
Confidence 479999999999999999999999999999994 56776543210 000111 1 12456788888
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~ 166 (388)
+.+.+++.++.. ++ .+|.+++..+ +.|.|.+ ++ .++.+|+||+|+| +.|..|.++|.+.+
T Consensus 78 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~-~~--------~~~~~~~li~AtG--~~~~~~~i~g~~~~---- 137 (319)
T 3cty_A 78 FADHAANYAKIR--EG-VEVRSIKKTQ--GGFDIET-ND--------DTYHAKYVIITTG--TTHKHLGVKGESEY---- 137 (319)
T ss_dssp HHHHHHTTSEEE--ET-CCEEEEEEET--TEEEEEE-SS--------SEEEEEEEEECCC--EEECCCCCBTTTTT----
T ss_pred HHHHHHHcCCEE--EE-eeEEEEEEeC--CEEEEEE-CC--------CEEEeCEEEECCC--CCcccCCCCChHHh----
Confidence 888888888765 55 7888888765 5677776 32 6789999999999 57888888877654
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHH
Q 016519 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRL 246 (388)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (388)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|++++|++.+ ...
T Consensus 138 --~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~---------~~~------------- 193 (319)
T 3cty_A 138 --FGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY---------MCE------------- 193 (319)
T ss_dssp --BTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC---------CSC-------------
T ss_pred --CCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc---------CCC-------------
Confidence 33334433222222345789999999999999999999999999999988822 110
Q ss_pred HhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-----eEEee---CCc--EEecc
Q 016519 247 VYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIFE---NGH--SHHFD 314 (388)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~---~g~--~~~~D 314 (388)
..+.+.+.+.+|+++.+ +.++..+ ++.+. +|+ ++++|
T Consensus 194 -------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D 242 (319)
T 3cty_A 194 -------------------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETD 242 (319)
T ss_dssp -------------------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCS
T ss_pred -------------------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecC
Confidence 01123344567888877 7777644 36665 665 68999
Q ss_pred EEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhhhccCC
Q 016519 315 SIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSILSP 387 (388)
Q Consensus 315 ~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l~~ 387 (388)
.||+|+|+.||+ .++.......+++|++.+|+ .++++.|+||++|||+.. ...|+.+|+.+|.+|.+.|..
T Consensus 243 ~vi~a~G~~p~~-~~l~~~gl~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 243 GVFIYVGLIPQT-SFLKDSGVKLDERGYIVVDS-RQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp EEEECCCEEECC-GGGTTSCCCBCTTSCBCCCT-TCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEeeCCccCh-HHHhhccccccCCccEeCCC-CCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999998 55555433346789999984 477899999999999865 347999999999999988753
No 21
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=7.3e-36 Score=271.67 Aligned_cols=291 Identities=14% Similarity=0.209 Sum_probs=199.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.|||+||||||||++||..|+++|++|+|||+....|.++. .+.+.. ..+..++ .++...+..++..+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~-G~~~~~-----~~i~~~~------g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG-GQLTTT-----TIIENFP------GFPNGIDGNELMMN 71 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT-CGGGGS-----SEECCST------TCTTCEEHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC-CCcCCh-----HHhhhcc------CCcccCCHHHHHHH
Confidence 58999999999999999999999999999999763332221 111100 0011111 11223456788888
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~ 166 (388)
+.+..++++... ....+....... +.+.+.+.++ .+++||+||+||| +.|+.|++||.+.+
T Consensus 72 ~~~~~~~~~~~~---~~~~v~~~~~~~--~~~~~~~~~~--------~~~~~~~liiATG--~~~~~~~ipG~~~~---- 132 (314)
T 4a5l_A 72 MRTQSEKYGTTI---ITETIDHVDFST--QPFKLFTEEG--------KEVLTKSVIIATG--ATAKRMHVPGEDKY---- 132 (314)
T ss_dssp HHHHHHHTTCEE---ECCCEEEEECSS--SSEEEEETTC--------CEEEEEEEEECCC--EEECCCCCTTHHHH----
T ss_pred HHHHHhhcCcEE---EEeEEEEeecCC--CceEEEECCC--------eEEEEeEEEEccc--ccccccCCCccccc----
Confidence 888888888663 444565555543 5566666654 7899999999999 68999999998765
Q ss_pred CCCcceeeccCCCC--CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHH
Q 016519 167 TGTGEVIHSTQYKN--GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLS 244 (388)
Q Consensus 167 ~~~~~~~~~~~~~~--~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (388)
.....+...... ....++++++|||+|.+|+|+|..+++.|.+|++++|...+ .......
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~---------~~~~~~~------- 194 (314)
T 4a5l_A 133 --WQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF---------RASKTMQ------- 194 (314)
T ss_dssp --BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC---------CSCHHHH-------
T ss_pred --cccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc---------cccchhh-------
Confidence 444444443322 22345899999999999999999999999999999988722 1111000
Q ss_pred HHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-----eEEe-----eCCcEEe
Q 016519 245 RLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIF-----ENGHSHH 312 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~-----~~g~~~~ 312 (388)
.+.....+++.+.. +.++... ++.+ .++++++
T Consensus 195 ------------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~ 238 (314)
T 4a5l_A 195 ------------------------------------ERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVP 238 (314)
T ss_dssp ------------------------------------HHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEE
T ss_pred ------------------------------------hhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeec
Confidence 11122233333333 3333211 2222 3457899
Q ss_pred ccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc----ccchhhHHHHHHHhhhccC
Q 016519 313 FDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL----YGAAADAQNIADHINSILS 386 (388)
Q Consensus 313 ~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~----~~a~~~~~~~a~~i~~~l~ 386 (388)
+|.|++++|++||+. ++... ...+++|.+ ++ +.++|+.|||||+|||+... ..|+.+|+.+|.++.++|+
T Consensus 239 ~d~vi~a~G~~pn~~-~l~~~-~~~~~~G~i-v~-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 239 VAGLFYAIGHSPNSK-FLGGQ-VKTADDGYI-LT-EGPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp CSEEEECSCEEESCG-GGTTS-SCBCTTSCB-CC-BTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEecccccChh-Hhccc-ceEcCCeeE-eC-CCCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999994 44433 455677877 45 46789999999999998753 3689999999999998874
No 22
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=3.1e-35 Score=269.73 Aligned_cols=286 Identities=16% Similarity=0.220 Sum_probs=210.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEee----cCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILER----ENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~----~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (388)
.+||+||||||+|+++|..|++.|++|+|||+ ....||.|..... ...++. ++......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~----------~~~~~~------~~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD----------VENFPG------FPEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE----------ECCSTT------CTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc----------cccCCC------CccCCCHHH
Confidence 47999999999999999999999999999998 4556665542210 001111 111235678
Q ss_pred HHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc-
Q 016519 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS- 161 (388)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~- 161 (388)
+.+++.+.+++.+++. +.++ |..++... +.|+|.+ ++ .++++|+||+||| ++|..|.++|.+.
T Consensus 72 ~~~~l~~~~~~~gv~~--~~~~-v~~i~~~~--~~~~v~~-~~--------~~~~~~~vv~A~G--~~~~~~~~~g~~~~ 135 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTI--FTET-VTKVDFSS--KPFKLFT-DS--------KAILADAVILAIG--AVAKRLSFVGSGEV 135 (333)
T ss_dssp HHHHHHHHHHHTTCEE--ECCC-CCEEECSS--SSEEEEC-SS--------EEEEEEEEEECCC--EEECCCCCBTCSSS
T ss_pred HHHHHHHHHHHCCCEE--EEeE-EEEEEEcC--CEEEEEE-CC--------cEEEcCEEEECCC--CCcCCCCCCCcccc
Confidence 8889988888888775 6665 88887654 6788887 43 7899999999999 5677788887764
Q ss_pred ---ccccCCCCcceeeccCCCCCCC--CCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhH
Q 016519 162 ---FCSSATGTGEVIHSTQYKNGKP--YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGV 236 (388)
Q Consensus 162 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~ 236 (388)
+ .+..++......... ..+++++|||+|.+|+|+|..|.+.+.+|++++|++.+ ...
T Consensus 136 ~~~~------~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~---------~~~--- 197 (333)
T 1vdc_A 136 LGGF------WNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF---------RAS--- 197 (333)
T ss_dssp SSCC------BTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC---------CSC---
T ss_pred cccc------ccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC---------Ccc---
Confidence 3 233344332222222 45899999999999999999999999999999998832 110
Q ss_pred HHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchh-hhhcCCcEEEecC--ceEEEcCe-------EEee
Q 016519 237 DTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTC-EKIKSGQIQVLPG--IESIRGNE-------VIFE 306 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~--v~~~~~~~-------v~~~ 306 (388)
..+. +.+++.+|+++.+ +.+++.+. +.+.
T Consensus 198 -----------------------------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~ 236 (333)
T 1vdc_A 198 -----------------------------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVK 236 (333)
T ss_dssp -----------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEE
T ss_pred -----------------------------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEE
Confidence 0011 2345679999887 88886542 7765
Q ss_pred ---CC--cEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHH
Q 016519 307 ---NG--HSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNI 377 (388)
Q Consensus 307 ---~g--~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~ 377 (388)
+| +++++|.||+|+|++|++ .++... ...+++|++.+++..++++.|+||++|||+.. ...|..+|+.+
T Consensus 237 ~~~~g~~~~i~~D~vi~a~G~~p~~-~~~~~~-l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~a 314 (333)
T 1vdc_A 237 NVVTGDVSDLKVSGLFFAIGHEPAT-KFLDGG-VELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMA 314 (333)
T ss_dssp ETTTCCEEEEECSEEEECSCEEESC-GGGTTS-SCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHH
T ss_pred ecCCCceEEEecCEEEEEeCCccch-HHhhcc-ccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHH
Confidence 45 578999999999999998 444422 23466899999966678899999999999875 33789999999
Q ss_pred HHHhhhcc
Q 016519 378 ADHINSIL 385 (388)
Q Consensus 378 a~~i~~~l 385 (388)
|.+|.+.|
T Consensus 315 a~~i~~~l 322 (333)
T 1vdc_A 315 ALDAEHYL 322 (333)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998876
No 23
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-34 Score=268.71 Aligned_cols=309 Identities=19% Similarity=0.274 Sum_probs=214.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeecCCCCcccccCCcCceeeecC---CccccCCCCCC--CCC------C
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLA---KQFCQLPHLPF--PSS------Y 74 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~------~ 74 (388)
++||+|||||++|+++|..|++.|+ +|+|||+.+ +|+.|...... ..+..+ ...+.+..... +.. .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhcccccccccccc
Confidence 3799999999999999999999999 999999988 88887642111 111111 11111111110 001 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 75 PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
..++...++.+|++++++++++.+ +++++|++++..+ +.|.|.+.+ .++.||+||+|||.++.|.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~---------g~~~~d~vVlAtG~~~~p~-- 146 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNI--FENTVVTNISADD--AYYTIATTT---------ETYHADYIFVATGDYNFPK-- 146 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS---------CCEEEEEEEECCCSTTSBC--
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEECC--CeEEEEeCC---------CEEEeCEEEECCCCCCccC--
Confidence 235677889999999999988876 8899999998765 578888765 4688999999999755544
Q ss_pred CCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChh
Q 016519 155 DIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCG 234 (388)
Q Consensus 155 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~ 234 (388)
+++ . ..+|+..+.....+++++|+|||+|.+|+|+|..|.+.+.+|++++|++.+ ++..
T Consensus 147 -ip~-~----------~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~---------~~~~ 205 (369)
T 3d1c_A 147 -KPF-K----------YGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL---------NDPD 205 (369)
T ss_dssp -CCS-S----------SCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------------
T ss_pred -CCC-C----------ceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC---------CCCC
Confidence 333 1 246666665555556889999999999999999999999999999998832 1100
Q ss_pred hHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCc-EEEecC--ceEE--EcC--eEEeeC
Q 016519 235 GVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQ-IQVLPG--IESI--RGN--EVIFEN 307 (388)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~--v~~~--~~~--~v~~~~ 307 (388)
+. +.. ...+.....+.+.+++.+ |+++.+ |.++ +++ .+.+.+
T Consensus 206 ~d----------------------~~~---------~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~ 254 (369)
T 3d1c_A 206 AD----------------------PSV---------RLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDS 254 (369)
T ss_dssp ------------------------CTT---------SCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESS
T ss_pred CC----------------------CCc---------cCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecC
Confidence 00 000 000111122245556675 999987 8888 444 367788
Q ss_pred CcEEe-ccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc-------ccchhhHHHHHH
Q 016519 308 GHSHH-FDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------YGAAADAQNIAD 379 (388)
Q Consensus 308 g~~~~-~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~-------~~a~~~~~~~a~ 379 (388)
|+++. +|.||+|||++|+++.+.... +.+++|++.+++..+.++.|+||++||++... ..+..||+.+|+
T Consensus 255 g~~~~~~d~vi~a~G~~~~~~~~~~~~--~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~ 332 (369)
T 3d1c_A 255 GQSVHTPHEPILATGFDATKNPIVQQL--FVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAH 332 (369)
T ss_dssp SCCEEESSCCEECCCBCGGGSHHHHHH--SCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHH
T ss_pred CeEeccCCceEEeeccCCccchhhhhh--ccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHH
Confidence 88775 699999999999984443322 22678989999777889999999999997641 246788999999
Q ss_pred HhhhccC
Q 016519 380 HINSILS 386 (388)
Q Consensus 380 ~i~~~l~ 386 (388)
+|..++.
T Consensus 333 ~l~~~~~ 339 (369)
T 3d1c_A 333 LLTQREG 339 (369)
T ss_dssp HHHHHTT
T ss_pred HHhcccC
Confidence 9987764
No 24
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.8e-35 Score=268.53 Aligned_cols=290 Identities=17% Similarity=0.262 Sum_probs=212.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.+||+||||||+|+++|..|++.|++|+|||+. ..||.|..... ...++ .++......++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~------~~~~~~~~~~~~~~ 67 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWP------GDPNDLTGPLLMER 67 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCST------TCCSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCC------CCCCCCCHHHHHHH
Confidence 479999999999999999999999999999975 56776543210 00011 11222456788889
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~ 166 (388)
+.+.+++.+++. ++++ ++.++... +.|.+ +.++ .++.||+||+||| +.|..|.++|.+.+
T Consensus 68 ~~~~~~~~~~~~--~~~~-v~~i~~~~--~~~~v-~~~~--------~~~~~~~lv~AtG--~~~~~~~~~g~~~~---- 127 (320)
T 1trb_A 68 MHEHATKFETEI--IFDH-INKVDLQN--RPFRL-NGDN--------GEYTCDALIIATG--ASARYLGLPSEEAF---- 127 (320)
T ss_dssp HHHHHHHTTCEE--ECCC-EEEEECSS--SSEEE-EESS--------CEEEEEEEEECCC--EEECCCCCHHHHHT----
T ss_pred HHHHHHHCCCEE--EEee-eeEEEecC--CEEEE-EeCC--------CEEEcCEEEECCC--CCcCCCCCCChHHh----
Confidence 988888888775 6665 88887654 67877 4443 6899999999999 57888888876654
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHH
Q 016519 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRL 246 (388)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (388)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|++++|++.+ .+..
T Consensus 128 --~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~---------~~~~------------ 184 (320)
T 1trb_A 128 --KGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF---------RAEK------------ 184 (320)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC---------CCCH------------
T ss_pred --CCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc---------ccCH------------
Confidence 33334433222222345889999999999999999999999999999998832 1110
Q ss_pred HhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe-----EEeeC----C--cEEec
Q 016519 247 VYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-----VIFEN----G--HSHHF 313 (388)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-----v~~~~----g--~~~~~ 313 (388)
.+...+.+.+++.+|+++.+ +.+++.+. +.+.+ | +++++
T Consensus 185 ----------------------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~ 236 (320)
T 1trb_A 185 ----------------------------ILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDV 236 (320)
T ss_dssp ----------------------------HHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEEC
T ss_pred ----------------------------HHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEc
Confidence 01111235566789999987 88887543 77765 4 57899
Q ss_pred cEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCC----CccCCCceEEEeccccC----cccchhhHHHHHHHhhhcc
Q 016519 314 DSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPN----HWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 314 D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l 385 (388)
|.||+|+|++|++ .++... ...+ +|++.++... +.++.|+||++|||+.. ...|..+|+.+|.+|.+.|
T Consensus 237 D~vv~a~G~~p~~-~~~~~~-l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 313 (320)
T 1trb_A 237 AGLFVAIGHSPNT-AIFEGQ-LELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYL 313 (320)
T ss_dssp SEEEECSCEEESC-GGGTTT-SCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCh-HHhccc-cccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHH
Confidence 9999999999998 444422 2335 8999998553 47889999999999875 3479999999999999887
Q ss_pred CC
Q 016519 386 SP 387 (388)
Q Consensus 386 ~~ 387 (388)
..
T Consensus 314 ~~ 315 (320)
T 1trb_A 314 DG 315 (320)
T ss_dssp TC
T ss_pred Hh
Confidence 53
No 25
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=5.7e-35 Score=264.46 Aligned_cols=284 Identities=15% Similarity=0.237 Sum_probs=202.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
+|||+||||||+|++||.+|+++|++|+|||+.. .||.+..+ | +.+... ......++.+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~-~--------------~~~~~~----~~~~~~~~~~~ 65 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN-S--------------HGFITR----DGIKPEEFKEI 65 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC-B--------------CCSTTC----TTBCHHHHHHH
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee-c--------------CCccCC----CCCCHHHHHHH
Confidence 5899999999999999999999999999999875 44433211 1 111110 11345566666
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~ 166 (388)
......+++... ++...+..+...+ .+.|+|.+.++ .+++||+||+||| ++|..|+++|.+.+
T Consensus 66 ~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~v~~~~g--------~~~~a~~liiATG--s~p~~p~i~G~~~~---- 128 (304)
T 4fk1_A 66 GLNEVMKYPSVH--YYEKTVVMITKQS-TGLFEIVTKDH--------TKYLAERVLLATG--MQEEFPSIPNVREY---- 128 (304)
T ss_dssp HHHHHTTSTTEE--EEECCEEEEEECT-TSCEEEEETTC--------CEEEEEEEEECCC--CEEECCSCTTHHHH----
T ss_pred HHHHHHhcCCEE--EEeeEEEEeeecC-CCcEEEEECCC--------CEEEeCEEEEccC--CccccccccCcccc----
Confidence 655555555433 5555666665543 46788888876 7899999999999 68999999998765
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEECCCCC-HHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHH
Q 016519 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNS-GMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSR 245 (388)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~-a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (388)
.+..++.....+....++++++|||+|.. ++++|..+.+.+.+|+++.+...+ ..
T Consensus 129 --~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~----------~~------------ 184 (304)
T 4fk1_A 129 --YGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL----------SQ------------ 184 (304)
T ss_dssp --BTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC----------CH------------
T ss_pred --ccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc----------hh------------
Confidence 44444444333444456778888888865 678888888889999998877621 11
Q ss_pred HHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC-ceEEEcC-----eEEeeCCcEEeccEEEEc
Q 016519 246 LVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN-----EVIFENGHSHHFDSIVFC 319 (388)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~-----~v~~~~g~~~~~D~vi~a 319 (388)
.+.+.+.+.++.++.+ +..+..+ .+.+.+|+++++|.++++
T Consensus 185 ---------------------------------~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~ 231 (304)
T 4fk1_A 185 ---------------------------------TIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIV 231 (304)
T ss_dssp ---------------------------------HHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEEC
T ss_pred ---------------------------------hhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeee
Confidence 1123344455666555 5555533 478899999999988888
Q ss_pred cCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhhhccC
Q 016519 320 TGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSILS 386 (388)
Q Consensus 320 tG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l~ 386 (388)
.|..|+. .++......++++|++.+| +.++|+.|||||+|||++. +..|+.+|+.+|..|.++|.
T Consensus 232 ~g~~~~~-~~~~~~g~~~~~~G~I~vd-~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 232 PTFFRPN-QFIEQLGCELQSNGTFVID-DFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp CEEECSS-CHHHHTTCCCCTTSSSCSS-TTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccCC-hhhhhcCeEECCCCCEEEC-cCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 8777766 3445553446788999998 6778999999999999753 44789999999999988763
No 26
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=7.3e-34 Score=274.96 Aligned_cols=287 Identities=18% Similarity=0.267 Sum_probs=217.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
..+||+||||||+|+++|..|+++|++|+|+|+ ..||.|.... ....+. . ..+....++..
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~-------------~~~~~~---~-~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTV-------------DIENYI---S-VPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCS-------------CBCCBT---T-BSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccc-------------cccccC---C-CCCCCHHHHHH
Confidence 468999999999999999999999999999986 4677765321 000000 0 11346778899
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCC-CCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
++.+.++++++++ +.+++|+.++.... .+.|.|.+.++ .+++||+||+||| ++|..|.++|.+.+
T Consensus 272 ~l~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~V~~~~g--------~~~~~d~vVlAtG--~~~~~~~ipG~~~~-- 337 (521)
T 1hyu_A 272 ALKAHVSDYDVDV--IDSQSASKLVPAATEGGLHQIETASG--------AVLKARSIIIATG--AKWRNMNVPGEDQY-- 337 (521)
T ss_dssp HHHHHHHTSCEEE--ECSCCEEEEECCSSTTSCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTTTTTT--
T ss_pred HHHHHHHHcCCEE--EcCCEEEEEEeccCCCceEEEEECCC--------CEEEcCEEEECCC--CCcCCCCCCChhhh--
Confidence 9999999888776 88889999986432 24788988765 6899999999999 56777888887765
Q ss_pred cCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHH
Q 016519 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLS 244 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (388)
.+..++.....+.....+++++|||+|.+|+|+|..|++.+.+|+++.|++.+ .+.
T Consensus 338 ----~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l---------~~~----------- 393 (521)
T 1hyu_A 338 ----RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM---------KAD----------- 393 (521)
T ss_dssp ----TTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC---------CSC-----------
T ss_pred ----cCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc---------CcC-----------
Confidence 44445555444434456899999999999999999999999999999998822 111
Q ss_pred HHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcC-CcEEEecC--ceEEEcC-----eEEeeC---Cc--EE
Q 016519 245 RLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKS-GQIQVLPG--IESIRGN-----EVIFEN---GH--SH 311 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~~~-----~v~~~~---g~--~~ 311 (388)
..+.+.+++ .+|+++.+ ++++..+ ++.+.+ |+ ++
T Consensus 394 ---------------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i 440 (521)
T 1hyu_A 394 ---------------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSV 440 (521)
T ss_dssp ---------------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEE
T ss_pred ---------------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEE
Confidence 111344454 58999988 8888753 456654 54 68
Q ss_pred eccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhhhcc
Q 016519 312 HFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 312 ~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l 385 (388)
++|.|++|+|+.||+ .++... ..++++|++.++ +.++++.|+|||+|||+.. +..|+.+|..+|.+|.+.|
T Consensus 441 ~~D~vi~a~G~~pn~-~~l~~~-l~~~~~G~I~Vd-~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 441 ALAGIFVQIGLLPNT-HWLEGA-LERNRMGEIIID-AKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp ECSEEEECCCEEESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EcCEEEECcCCCCCc-hHHhhh-hccCCCCcEEeC-CCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHH
Confidence 999999999999998 455443 334678999998 5667899999999999875 3489999999999998865
No 27
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=4.2e-34 Score=270.84 Aligned_cols=291 Identities=18% Similarity=0.232 Sum_probs=203.5
Q ss_pred eEEEECCChHHHHHHHHHhhcC--CCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 9 EVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
+|+||||||+|+++|..|++.| .+|+|||+++..+.... + .|..+... ...........
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~--~-------l~~~~~~~---~~~~~~~~~~~------- 62 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC--A-------LPYVIGEV---VEDRRYALAYT------- 62 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG--G-------HHHHHTTS---SCCGGGTBCCC-------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc--h-------hHHHHcCC---ccchhhhhhcC-------
Confidence 7999999999999999999987 47999999875542110 0 00000000 00000000011
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~ 166 (388)
.+.+.++.+++. +.+++|+.++... ....+..... ++. .++.||+||+||| ++|..|.++|...+
T Consensus 63 ~~~~~~~~~i~~--~~~~~V~~id~~~--~~~~~~~~~~---~~~--~~~~yd~lVIATG--s~p~~p~i~g~~~~---- 127 (437)
T 4eqs_A 63 PEKFYDRKQITV--KTYHEVIAINDER--QTVSVLNRKT---NEQ--FEESYDKLILSPG--ASANSLGFESDITF---- 127 (437)
T ss_dssp HHHHHHHHCCEE--EETEEEEEEETTT--TEEEEEETTT---TEE--EEEECSEEEECCC--EEECCCCCCCTTEE----
T ss_pred HHHHHHhcCCEE--EeCCeEEEEEccC--cEEEEEeccC---Cce--EEEEcCEEEECCC--CccccccccCceEE----
Confidence 123455667776 8899999998654 4444443322 121 6789999999999 68988888875443
Q ss_pred CCCcceeeccCCCC--CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHH
Q 016519 167 TGTGEVIHSTQYKN--GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLS 244 (388)
Q Consensus 167 ~~~~~~~~~~~~~~--~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (388)
....+....... .....+++++|||+|.+|+|+|..+.+.|.+|+++++++ ++++.
T Consensus 128 --~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~---------~ll~~----------- 185 (437)
T 4eqs_A 128 --TLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD---------KINKL----------- 185 (437)
T ss_dssp --CCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS---------CCSTT-----------
T ss_pred --eeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec---------ccccc-----------
Confidence 111111000000 011237799999999999999999999999999999998 22221
Q ss_pred HHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEEeeCCcEEeccEEEEccCC
Q 016519 245 RLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSHHFDSIVFCTGF 322 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~~~~D~vi~atG~ 322 (388)
.++.....+.+.+++.+|+++.+ |++++.+.+.+++|+++++|.|++|+|.
T Consensus 186 ---------------------------~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 186 ---------------------------MDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp ---------------------------SCGGGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCE
T ss_pred ---------------------------ccchhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEece
Confidence 12233344466777788999888 9999999999999999999999999999
Q ss_pred CCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-------------cccchhhHHHHHHHhhhc
Q 016519 323 KRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAAADAQNIADHINSI 384 (388)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~-------------~~~a~~~~~~~a~~i~~~ 384 (388)
+||+ .+++......+++|++.+| +.++|+.|||||+|||+.. ...|.+||+.+|++|...
T Consensus 239 ~Pn~-~~~~~~gl~~~~~G~I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~ 311 (437)
T 4eqs_A 239 HPNS-KFIESSNIKLDRKGFIPVN-DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGN 311 (437)
T ss_dssp EESC-GGGTTSSCCCCTTSCEECC-TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSC
T ss_pred ecCc-HHHHhhhhhhccCCcEecC-CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCC
Confidence 9998 5666654456788999998 6678999999999999753 226889999999999864
No 28
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=2.9e-33 Score=266.92 Aligned_cols=286 Identities=13% Similarity=0.143 Sum_probs=200.7
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
+||+|||||++|+++|..|++. |.+|+|||+++..|.... .... +.. ..+....++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~--~~~~-----------~~~-------~~~~~~~~~~~ 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG--GLSA-----------YFN-------HTINELHEARY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------CC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCc--cchh-----------hhc-------CCCCCHHHhhc
Confidence 6999999999999999999998 899999999987662110 0000 000 00001111111
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
+....++++++.. +++++|+.++... ..+.+.... . . .++.||+||+||| ++|..|+++|.+..
T Consensus 63 ~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~v~~~~-~---~---~~~~~d~lviAtG--~~p~~p~i~g~~~~--- 126 (452)
T 3oc4_A 63 ITEEELRRQKIQL--LLNREVVAMDVEN--QLIAWTRKE-E---Q---QWYSYDKLILATG--ASQFSTQIRGSQTE--- 126 (452)
T ss_dssp CCHHHHHHTTEEE--ECSCEEEEEETTT--TEEEEEETT-E---E---EEEECSEEEECCC--CCBCCCCCBTTTCT---
T ss_pred CCHHHHHHCCCEE--EECCEEEEEECCC--CEEEEEecC-c---e---EEEEcCEEEECCC--cccCCCCCCCCCCC---
Confidence 1233445567665 8899999998765 666665222 1 1 7899999999999 68999999887642
Q ss_pred CCCCcceeeccCCCCCCC-----CCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHH
Q 016519 166 ATGTGEVIHSTQYKNGKP-----YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLM 240 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~-----~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
.+++...+.+... ..+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ++++..+.
T Consensus 127 -----~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~---------~~l~~~~d---- 188 (452)
T 3oc4_A 127 -----KLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE---------NLLPKYFD---- 188 (452)
T ss_dssp -----TEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------SSSTTTCC----
T ss_pred -----CEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC---------ccccccCC----
Confidence 3555544333211 247899999999999999999999999999999998 33332111
Q ss_pred HHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc--Ce--EEeeCCcEEecc
Q 016519 241 VMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NE--VIFENGHSHHFD 314 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~--v~~~~g~~~~~D 314 (388)
+.+...+.+.+++.+|+++.+ |.+++. +. +.++++ ++++|
T Consensus 189 ---------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD 234 (452)
T 3oc4_A 189 ---------------------------------KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCD 234 (452)
T ss_dssp ---------------------------------HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEES
T ss_pred ---------------------------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeC
Confidence 112222356677789999987 888872 33 555566 89999
Q ss_pred EEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-------------cccchhhHHHHHHHh
Q 016519 315 SIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAAADAQNIADHI 381 (388)
Q Consensus 315 ~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~-------------~~~a~~~~~~~a~~i 381 (388)
.||+|+|++||+. ++... ...+++|++.+| +.++++.|+|||+|||+.. ...|..||+.+|.+|
T Consensus 235 ~Vv~A~G~~p~~~-~l~~~-~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 311 (452)
T 3oc4_A 235 SGIFALNLHPQLA-YLDKK-IQRNLDQTIAVD-AYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNL 311 (452)
T ss_dssp EEEECSCCBCCCS-SCCTT-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSS
T ss_pred EEEECcCCCCChH-HHHhh-hccCCCCCEEEC-cCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHh
Confidence 9999999999984 44443 345678999999 5678899999999999863 237999999999998
Q ss_pred hhc
Q 016519 382 NSI 384 (388)
Q Consensus 382 ~~~ 384 (388)
...
T Consensus 312 ~g~ 314 (452)
T 3oc4_A 312 EEK 314 (452)
T ss_dssp SSC
T ss_pred cCC
Confidence 764
No 29
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-34 Score=274.73 Aligned_cols=303 Identities=16% Similarity=0.177 Sum_probs=201.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecCC----ccccCCCCCCCCC----C-C
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPSS----Y-P 75 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~----~-~ 75 (388)
.++||+|||||++|+++|..|++.|++|+|||++ .+||.|.. .+.+...+.... .+.....+.+... . .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 4589999999999999999999999999999997 57887652 222111100000 0000011111000 0 0
Q ss_pred CCCCHHHHHH-----------HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEe
Q 016519 76 MFVSRAQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVA 144 (388)
Q Consensus 76 ~~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~A 144 (388)
...+...+.+ .++..++..+++. ..+ .+..++ ...+.|.+.++.. .++.||+||+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~----~~~~~v~~~~g~~------~~~~~d~lviA 155 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDV--VFG-WARFNK----DGNVEVQKRDNTT------EVYSANHILVA 155 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEE-EEEECT----TSCEEEEESSSCC------EEEEEEEEEEC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEee----CCEEEEEeCCCcE------EEEEeCEEEEc
Confidence 1122333322 2233344455553 444 344432 2456777655422 48999999999
Q ss_pred ecCCCCCCCC-CCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhh
Q 016519 145 SGETSNPFTP-DIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYL 223 (388)
Q Consensus 145 tG~~s~p~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~ 223 (388)
|| ++|..| +++|.+. .+++.++..... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+
T Consensus 156 tG--s~p~~p~~i~g~~~----------~~~~~~~~~l~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~---- 218 (479)
T 2hqm_A 156 TG--GKAIFPENIPGFEL----------GTDSDGFFRLEE-QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE---- 218 (479)
T ss_dssp CC--EEECCCTTSTTGGG----------SBCHHHHHHCSS-CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS----
T ss_pred CC--CCCCCCCCCCCccc----------ccchHHHhcccc-cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC----
Confidence 99 688888 8887642 233332222222 37899999999999999999999999999999988
Q ss_pred hHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC
Q 016519 224 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN 301 (388)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~ 301 (388)
+.++.. ++.+...+.+.+++.+|+++.+ |.+++.+
T Consensus 219 -----~~l~~~--------------------------------------d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 255 (479)
T 2hqm_A 219 -----TVLRKF--------------------------------------DECIQNTITDHYVKEGINVHKLSKIVKVEKN 255 (479)
T ss_dssp -----SSCTTS--------------------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEEC
T ss_pred -----cccccc--------------------------------------CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEc
Confidence 333210 1111122245566678998888 8888642
Q ss_pred ------eEEeeCC-cEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC---cccc
Q 016519 302 ------EVIFENG-HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG---LYGA 370 (388)
Q Consensus 302 ------~v~~~~g-~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~---~~~a 370 (388)
.+.+.+| +++++|.||+|+|++||+ .+ ++......+++|++.+| +.++++.|+|||+|||++. ...|
T Consensus 256 ~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A 333 (479)
T 2hqm_A 256 VETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIAD-EYQNTNVPNIYSLGDVVGKVELTPVA 333 (479)
T ss_dssp C-CCCEEEEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTTSSCCHHHH
T ss_pred CCCcEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeEC-CCCccCCCCEEEEEecCCCcccHHHH
Confidence 4677788 789999999999999998 66 55553445678999998 4567899999999999765 3379
Q ss_pred hhhHHHHHHHhhhc
Q 016519 371 AADAQNIADHINSI 384 (388)
Q Consensus 371 ~~~~~~~a~~i~~~ 384 (388)
..+|+.+|.+|...
T Consensus 334 ~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 334 IAAGRKLSNRLFGP 347 (479)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999853
No 30
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=4.4e-34 Score=275.06 Aligned_cols=292 Identities=18% Similarity=0.226 Sum_probs=200.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcC---CCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQS---IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g---~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (388)
.++||+|||||++|+++|..|++.| .+|+|||+++..+..+.. +...... ....+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-----~~~~~~~------~~~~~~~--------- 93 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-----MALWIGE------QIAGPEG--------- 93 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-----HHHHHTT------SSSCSGG---------
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-----cchhhcC------ccCCHHH---------
Confidence 3489999999999999999999988 999999998865532210 0000000 0000000
Q ss_pred HHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcc--
Q 016519 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLS-- 160 (388)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~-- 160 (388)
+.....+.+++.++++ +++++|+.++..+ +.+.+.. ++.. .+++||+||+||| ++|..|+++|.+
T Consensus 94 ~~~~~~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~-~g~~------~~~~~d~lviAtG--~~p~~p~i~G~~~~ 160 (490)
T 2bc0_A 94 LFYSDKEELESLGAKV--YMESPVQSIDYDA--KTVTALV-DGKN------HVETYDKLIFATG--SQPILPPIKGAEIK 160 (490)
T ss_dssp GBSCCHHHHHHTTCEE--ETTCCEEEEETTT--TEEEEEE-TTEE------EEEECSEEEECCC--EEECCCSCBTCCBC
T ss_pred hhhcCHHHHHhCCCEE--EeCCEEEEEECCC--CEEEEEe-CCcE------EEEECCEEEECCC--CCcCCCCCCCcccc
Confidence 0011123345567665 7899999888654 5555542 3211 6799999999999 688888888876
Q ss_pred ----cccccCCC-CcceeeccCCCC-------CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHh
Q 016519 161 ----SFCSSATG-TGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLL 228 (388)
Q Consensus 161 ----~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~ 228 (388)
.| +. ...+++...+.+ .....+++++|||+|.+|+|+|..|++.|.+|+++.|++
T Consensus 161 ~~~~~f----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~--------- 227 (490)
T 2bc0_A 161 EGSLEF----EATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD--------- 227 (490)
T ss_dssp TTCTTC----CBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------
T ss_pred cccccc----ccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc---------
Confidence 11 00 012444322211 111358899999999999999999999999999999998
Q ss_pred hcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe----
Q 016519 229 RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE---- 302 (388)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~---- 302 (388)
++++..+- +.+...+.+.+++.+|+++.+ +++++.++
T Consensus 228 ~~l~~~~~-------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~ 270 (490)
T 2bc0_A 228 TCLAGYYD-------------------------------------RDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEK 270 (490)
T ss_dssp STTTTTSC-------------------------------------HHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCE
T ss_pred chhhhHHH-------------------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEE
Confidence 33331111 111222346677789999887 88887542
Q ss_pred EEeeCCcEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-------------ccc
Q 016519 303 VIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYG 369 (388)
Q Consensus 303 v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~-------------~~~ 369 (388)
+.+ +|+++++|.||+|+|++||++ +++.. ...+++|++.+| +.++++.|+|||+|||+.. ...
T Consensus 271 v~~-~g~~i~~D~Vi~a~G~~p~~~-ll~~~-l~~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~ 346 (490)
T 2bc0_A 271 IIT-DKNEYDVDMVILAVGFRPNTT-LGNGK-IDLFRNGAFLVN-KRQETSIPGVYAIGDCATIYDNATRDTNYIALASN 346 (490)
T ss_dssp EEE-SSCEEECSEEEECCCEEECCG-GGTTC-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHH
T ss_pred EEE-CCcEEECCEEEECCCCCcChH-HHHhh-hccCCCCCEEEC-CCcccCCCCEEEeeeeEEeccccCCceeecccHHH
Confidence 444 788999999999999999985 55544 334678999998 5677899999999999862 237
Q ss_pred chhhHHHHHHHhhhc
Q 016519 370 AAADAQNIADHINSI 384 (388)
Q Consensus 370 a~~~~~~~a~~i~~~ 384 (388)
|..||+.+|.+|...
T Consensus 347 A~~qg~~aa~~i~g~ 361 (490)
T 2bc0_A 347 AVRTGIVAAHNACGT 361 (490)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999864
No 31
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.7e-33 Score=270.16 Aligned_cols=308 Identities=13% Similarity=0.091 Sum_probs=206.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC-CcCceeeecCC----ccc--cCCCCCCCCCCCCC
Q 016519 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFC--QLPHLPFPSSYPMF 77 (388)
Q Consensus 5 ~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~ 77 (388)
+.++||+||||||+|+++|..|++.|++|+|||+++.+||.|... +.+...+.... .+. .+..+..+.. ...
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~-~~~ 82 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS-EVR 82 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES-CEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC-CCc
Confidence 345899999999999999999999999999999998899977531 11111000000 000 0000000000 000
Q ss_pred CCHHHHH-----------HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeec
Q 016519 78 VSRAQFI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASG 146 (388)
Q Consensus 78 ~~~~~~~-----------~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG 146 (388)
.+...+. ..+...+++.+++. +.+..+ .+ +. +.+.|.+.++. . .+++||+||+|||
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~-~~--~~--~~~~v~~~~gg---~---~~~~~d~lViAtG 149 (474)
T 1zmd_A 83 LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVH--VNGYGK-IT--GK--NQVTATKADGG---T---QVIDTKNILIATG 149 (474)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEE-EE--ET--TEEEEECTTSC---E---EEEEEEEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEE-Ee--cC--CEEEEEecCCC---c---EEEEeCEEEECCC
Confidence 1222222 22344555667665 666532 33 22 56777766521 1 5799999999999
Q ss_pred CCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHH
Q 016519 147 ETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLV 226 (388)
Q Consensus 147 ~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~ 226 (388)
++|..|+++|.+.. .++++.+...... .+++++|||+|.+|+|+|..+.+.|.+|+++++++
T Consensus 150 --s~p~~p~i~g~~~~--------~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~------- 211 (474)
T 1zmd_A 150 --SEVTPFPGITIDED--------TIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG------- 211 (474)
T ss_dssp --EEECCCTTCCCCSS--------SEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-------
T ss_pred --CCCCCCCCCCCCcC--------cEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-------
Confidence 68888888886532 3566655544433 37899999999999999999999999999999998
Q ss_pred HhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC--e
Q 016519 227 LLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--E 302 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~ 302 (388)
+++|..+ ++.+...+.+.+++.+|+++.+ |.+++.+ .
T Consensus 212 --~~l~~~~-------------------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 252 (474)
T 1zmd_A 212 --HVGGVGI-------------------------------------DMEISKNFQRILQKQGFKFKLNTKVTGATKKSDG 252 (474)
T ss_dssp --SSSCSSC-------------------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTS
T ss_pred --ccCCccc-------------------------------------CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCc
Confidence 3333111 1111122245566778999988 8888643 2
Q ss_pred -EEe-------eCCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---ccc
Q 016519 303 -VIF-------ENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YGA 370 (388)
Q Consensus 303 -v~~-------~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~a 370 (388)
+.+ .+++++++|.||+|+|++||+..+ ++......+++|++.+| +.++++.|+|||+|||+... ..|
T Consensus 253 ~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A 331 (474)
T 1zmd_A 253 KIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVN-TRFQTKIPNIYAIGDVVAGPMLAHKA 331 (474)
T ss_dssp CEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCC-TTCBCSSTTEEECGGGSSSCCCHHHH
T ss_pred eEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEEC-cCCccCCCCEEEeeecCCCCccHHHH
Confidence 433 356789999999999999998543 34442334667999998 45778999999999998753 378
Q ss_pred hhhHHHHHHHhhhc
Q 016519 371 AADAQNIADHINSI 384 (388)
Q Consensus 371 ~~~~~~~a~~i~~~ 384 (388)
..||+.+|.+|...
T Consensus 332 ~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 332 EDEGIICVEGMAGG 345 (474)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999864
No 32
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.8e-34 Score=274.53 Aligned_cols=305 Identities=18% Similarity=0.210 Sum_probs=198.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecCCcccc-----CCCCCCCCCCCCCCCH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQFCQ-----LPHLPFPSSYPMFVSR 80 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 80 (388)
++||+||||||+|+++|..|++.|++|+|||+.+.+||.|.. .+++...+..+...+. +..+......+ ..+.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~-~~~~ 103 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP-KLNL 103 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC-EECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC-ccCH
Confidence 489999999999999999999999999999999899997652 2332221111000000 01111000000 0122
Q ss_pred HHHH-----------HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 81 AQFI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 81 ~~~~-----------~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
..+. ..+....+..+++. ..+. ...+ +.+.+.|.+.++.. .+++||+||+|||+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~----~~~~~~v~~~~g~~------~~~~~d~lViATGs-- 168 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDG--FQGT-GKVL----GQGKVSVTNEKGEE------QVLEAKNVVIATGS-- 168 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEEC----SSSEEEEECTTSCE------EEEECSEEEECCCE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEE-EEEe----cCCEEEEEeCCCce------EEEEeCEEEEccCC--
Confidence 2222 22333344456553 3333 2222 23567777655422 68999999999994
Q ss_pred CCCCCCCCCccc-ccccCCCCc-ceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHH
Q 016519 150 NPFTPDIRGLSS-FCSSATGTG-EVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVL 227 (388)
Q Consensus 150 ~p~~~~~~g~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~ 227 (388)
.| +.+||.+. + .+ .+.+....... ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+
T Consensus 169 ~p--~~ipg~~~~~------~~~~~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-------- 231 (491)
T 3urh_A 169 DV--AGIPGVEVAF------DEKTIVSSTGALAL-EKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-------- 231 (491)
T ss_dssp EC--CCBTTBCCCC------CSSSEECHHHHTSC-SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS--------
T ss_pred CC--CCCCCccccc------CCeeEEehhHhhhh-hhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc--------
Confidence 55 34566542 1 12 23333333332 3348899999999999999999999999999999988
Q ss_pred hhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC--e-
Q 016519 228 LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--E- 302 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~- 302 (388)
++++.. ++.+...+.+.+++.+|+++.+ +.+++.+ .
T Consensus 232 -~~l~~~--------------------------------------d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~ 272 (491)
T 3urh_A 232 -TILGGM--------------------------------------DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGA 272 (491)
T ss_dssp -SSSSSS--------------------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEE
T ss_pred -cccccC--------------------------------------CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEE
Confidence 333210 1112222345667788999888 7777643 2
Q ss_pred -EEeeC---C--cEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC---cccchh
Q 016519 303 -VIFEN---G--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG---LYGAAA 372 (388)
Q Consensus 303 -v~~~~---g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~---~~~a~~ 372 (388)
+.+.+ | +++++|.||+|+|++|++..+ +.......+++|++.+| +.++++.|+|||+|||++. ...|..
T Consensus 273 ~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~ 351 (491)
T 3urh_A 273 KVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEID-RHFQTSIAGVYAIGDVVRGPMLAHKAED 351 (491)
T ss_dssp EEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHH
T ss_pred EEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCccchhHHHH
Confidence 55543 4 578999999999999998554 44443345678999999 5677899999999999865 338999
Q ss_pred hHHHHHHHhhhc
Q 016519 373 DAQNIADHINSI 384 (388)
Q Consensus 373 ~~~~~a~~i~~~ 384 (388)
+|+.+|.+|...
T Consensus 352 ~g~~aa~~i~g~ 363 (491)
T 3urh_A 352 EGVAVAEIIAGQ 363 (491)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHcCC
Confidence 999999999874
No 33
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.7e-33 Score=268.68 Aligned_cols=307 Identities=13% Similarity=0.126 Sum_probs=206.2
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecCC----c----c--ccCCCCCCCCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----Q----F--CQLPHLPFPSSY 74 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~----~----~--~~~~~~~~~~~~ 74 (388)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||.|.. .+.+...+.... . + +.++.......+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 4689999999999999999999999999999999888887652 111111000000 0 0 000000000000
Q ss_pred CCCC-CH----HHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 75 PMFV-SR----AQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 75 ~~~~-~~----~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
..+. .. ..+...+...+++.+++. +.++.+. + +. +.+.|.+.++.. .+++||+||+||| +
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~--~~--~~~~v~~~~G~~------~~i~~d~lIiAtG--s 149 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTY--VKGYGKF-V--SP--SEISVDTIEGEN------TVVKGKHIIIATG--S 149 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEEE-E--ET--TEEEECCSSSCC------EEEECSEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-e--cC--CEEEEEeCCCce------EEEEcCEEEECCC--C
Confidence 0000 01 112233445556667765 7776543 3 22 567776655422 5799999999999 6
Q ss_pred CCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhh
Q 016519 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLR 229 (388)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~ 229 (388)
+|..|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++++ +
T Consensus 150 ~p~~p~~~g~~~~--------~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~---------~ 211 (470)
T 1dxl_A 150 DVKSLPGVTIDEK--------KIVSSTGALALSE-IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS---------E 211 (470)
T ss_dssp EECCBTTBCCCSS--------SEECHHHHTTCSS-CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS---------S
T ss_pred CCCCCCCCCCCcc--------cEEeHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC---------c
Confidence 8888888776532 3555555444333 37899999999999999999999999999999998 3
Q ss_pred cCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe----E
Q 016519 230 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE----V 303 (388)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~----v 303 (388)
++|. + ++.+...+.+.+++.+|+++.+ +.+++.+. +
T Consensus 212 ~l~~-~-------------------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v 253 (470)
T 1dxl_A 212 IVPT-M-------------------------------------DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKL 253 (470)
T ss_dssp SSTT-S-------------------------------------CHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEE
T ss_pred cccc-c-------------------------------------cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEE
Confidence 3331 0 1111122245566678888887 88887542 3
Q ss_pred Eee---CC--cEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---ccchhhH
Q 016519 304 IFE---NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YGAAADA 374 (388)
Q Consensus 304 ~~~---~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~a~~~~ 374 (388)
.+. +| +++++|.||+|+|++||+..+ ++......+++|++.+| +.++++.|+|||+|||+... ..|..||
T Consensus 254 ~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g 332 (470)
T 1dxl_A 254 TVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVN-ERFSTNVSGVYAIGDVIPGPMLAHKAEEDG 332 (470)
T ss_dssp EEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCC-TTCBCSSTTEEECSTTSSSCCCHHHHHHHH
T ss_pred EEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEEeccCCCCccHHHHHHHH
Confidence 443 45 679999999999999998543 44543334667999998 45778999999999998753 3789999
Q ss_pred HHHHHHhhhc
Q 016519 375 QNIADHINSI 384 (388)
Q Consensus 375 ~~~a~~i~~~ 384 (388)
+.+|.+|...
T Consensus 333 ~~aa~~i~g~ 342 (470)
T 1dxl_A 333 VACVEYLAGK 342 (470)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHcCC
Confidence 9999999864
No 34
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=3e-33 Score=271.13 Aligned_cols=304 Identities=16% Similarity=0.172 Sum_probs=211.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecCCc----cccCCCCC-CCCCCCCCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQ----FCQLPHLP-FPSSYPMFVS 79 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~ 79 (388)
.++||+|||||++|+++|..|++.|++|+|||+++.+||.|.. .+.+...+..... +.....+. ++.....+++
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 4589999999999999999999999999999999878887652 1111111000000 00011111 1222222344
Q ss_pred HHHHHHHHH-------HHH-----HhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 016519 80 RAQFIEYLD-------HYV-----SHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (388)
Q Consensus 80 ~~~~~~~l~-------~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~ 147 (388)
..++..++. ... ++.+++. ++..++..++. . .|.+. + .+++||+||+|||
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~--~~~~~v~~i~~----~--~v~~~-g--------~~~~~d~lViATG- 183 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEY--ILNCPAKVIDN----H--TVEAA-G--------KVFKAKNLILAVG- 183 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCE--EESSCCEEEET----T--EEEET-T--------EEEEBSCEEECCC-
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEE--EEeeEEEEeeC----C--EEEEC-C--------EEEEeCEEEECCC-
Confidence 666666654 333 5566664 54667766652 2 35554 2 7899999999999
Q ss_pred CCCCCCCCCCCcccccccCCCCcceeeccCCC-CCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHH
Q 016519 148 TSNPFTPDIRGLSSFCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLV 226 (388)
Q Consensus 148 ~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~ 226 (388)
++|..|+++|.+.. .+++..+.. ......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+
T Consensus 184 -s~p~~p~i~G~~~~--------~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~------- 247 (523)
T 1mo9_A 184 -AGPGTLDVPGVNAK--------GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE------- 247 (523)
T ss_dssp -EECCCCCSTTTTSB--------TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-------
T ss_pred -CCCCCCCCCCcccC--------cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-------
Confidence 68999998887642 245555444 3333334899999999999999999999999999999988
Q ss_pred HhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc--Ce
Q 016519 227 LLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NE 302 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~ 302 (388)
.+++.. ++.+...+.+.+++.+|+++.+ |.+++. ++
T Consensus 248 --~~l~~~--------------------------------------~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~ 287 (523)
T 1mo9_A 248 --PLKLIK--------------------------------------DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANG 287 (523)
T ss_dssp --TTTTCC--------------------------------------SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTS
T ss_pred --cccccc--------------------------------------cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCC
Confidence 222210 1111222245666788999988 888864 33
Q ss_pred ------EEeeCCc-EEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC---cccchh
Q 016519 303 ------VIFENGH-SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG---LYGAAA 372 (388)
Q Consensus 303 ------v~~~~g~-~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~---~~~a~~ 372 (388)
+.+.+|+ ++++|.||+|+|++||+..++.......+++|++.+| +.++++.|+|||+|||++. ...|..
T Consensus 288 ~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~ 366 (523)
T 1mo9_A 288 RVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVN-EYLQTSVPNVYAVGDLIGGPMEMFKARK 366 (523)
T ss_dssp BEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGCSSCSHHHHHH
T ss_pred ceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEEC-CCCccCCCCEEEEeecCCCcccHHHHHH
Confidence 5666887 8999999999999999842444443344678999998 5677899999999999875 337999
Q ss_pred hHHHHHHHhhhc
Q 016519 373 DAQNIADHINSI 384 (388)
Q Consensus 373 ~~~~~a~~i~~~ 384 (388)
||+.+|.+|...
T Consensus 367 ~g~~aa~~i~g~ 378 (523)
T 1mo9_A 367 SGCYAARNVMGE 378 (523)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 999999999863
No 35
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=3.5e-33 Score=267.24 Aligned_cols=295 Identities=13% Similarity=0.115 Sum_probs=197.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecC----CccccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
++||+||||||+|+++|..|++.|++|+|||+++.+||.|.. .+.+...+... ..+..++.. ....+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~------~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV------KIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS------CCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC------CCCcCHH
Confidence 489999999999999999999999999999999999998763 22221110000 000000000 1112222
Q ss_pred HHH------------HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 82 QFI------------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 82 ~~~------------~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
.+. .++....++.+++. .. .++..++ .+.+.|.+.++.. .++.||+||+||| +
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~-g~v~~id----~~~~~V~~~~g~~------~~~~~d~lviAtG--~ 142 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTF--YK-GYVKIKD----PTHVIVKTDEGKE------IEAETRYMIIASG--A 142 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEE--ES-EEEEEEE----TTEEEEEETTSCE------EEEEEEEEEECCC--E
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEE--EE-eEEEEec----CCeEEEEcCCCcE------EEEecCEEEECCC--C
Confidence 222 23333334445443 33 3565554 2567787776511 3499999999999 6
Q ss_pred CCCCCCCCCcccccccCCCCcceeeccCCC---CCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHH
Q 016519 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYK---NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLV 226 (388)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~ 226 (388)
.|..|+++|.+.+ ++..++. ......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+
T Consensus 143 ~p~~p~i~G~~~~----------~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~------- 205 (466)
T 3l8k_A 143 ETAKLRLPGVEYC----------LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD------- 205 (466)
T ss_dssp EECCCCCTTGGGS----------BCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-------
T ss_pred CccCCCCCCccce----------EeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-------
Confidence 8999999887632 3333222 1112247899999999999999999999999999999988
Q ss_pred HhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc---C
Q 016519 227 LLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG---N 301 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~---~ 301 (388)
++++..+...+.+ .+.+.++ |+++.+ +.+++. +
T Consensus 206 --~~l~~~~d~~~~~-------------------------------------~l~~~l~---v~i~~~~~v~~i~~~~~~ 243 (466)
T 3l8k_A 206 --RALITLEDQDIVN-------------------------------------TLLSILK---LNIKFNSPVTEVKKIKDD 243 (466)
T ss_dssp --SSCTTSCCHHHHH-------------------------------------HHHHHHC---CCEECSCCEEEEEEEETT
T ss_pred --cCCCCCCCHHHHH-------------------------------------HHHhcCE---EEEEECCEEEEEEEcCCC
Confidence 3333211111111 1122222 666665 677665 3
Q ss_pred e--EEee--CCc--EEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---ccch
Q 016519 302 E--VIFE--NGH--SHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YGAA 371 (388)
Q Consensus 302 ~--v~~~--~g~--~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~a~ 371 (388)
. +.+. +|+ ++++|.||+|+|++||+. + +.......+++| +.+| +.++++.|+|||+|||+..+ ..|.
T Consensus 244 ~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~ 320 (466)
T 3l8k_A 244 EYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVD-ETMKTNIPNVFATGDANGLAPYYHAAV 320 (466)
T ss_dssp EEEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCC-TTCBCSSTTEEECGGGTCSCCSHHHHH
T ss_pred cEEEEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeEC-CCccCCCCCEEEEEecCCCCccHhHHH
Confidence 3 5565 566 789999999999999996 5 555534457788 8888 67778999999999998853 3899
Q ss_pred hhHHHHHHHhhhc
Q 016519 372 ADAQNIADHINSI 384 (388)
Q Consensus 372 ~~~~~~a~~i~~~ 384 (388)
.+|+.+|.+|...
T Consensus 321 ~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 321 RMSIAAANNIMAN 333 (466)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCC
Confidence 9999999999864
No 36
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=5.9e-33 Score=267.12 Aligned_cols=305 Identities=16% Similarity=0.157 Sum_probs=202.0
Q ss_pred CCeEEEECCChHHHHHHHHHhh-cCCCEEEEe--------ecCCCCccccc-CCcCceeeecCCc----cccCCCCCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAKQ----FCQLPHLPFPS 72 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~-~g~~v~lie--------~~~~~gg~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~ 72 (388)
++||+||||||+|+++|..|++ .|++|+||| +...+||.|.. .+++...+..... +.....+.+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 4899999999999999999999 999999999 35677887652 2222211100000 00011111100
Q ss_pred CCC-CCCCHHHHHHHHHH-----------HHHhc-CCcceeEeceEEEEEEEeCCCCcEEEEEcc-cC-CCCceeeEEEe
Q 016519 73 SYP-MFVSRAQFIEYLDH-----------YVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASN-LL-SPGRVIEEYYS 137 (388)
Q Consensus 73 ~~~-~~~~~~~~~~~l~~-----------~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~ 137 (388)
..+ ...+...+.++.+. .+++. +++. +.+. +..++ . . +|.+.+ .. ..+.. .+++
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g~-~~~i~--~--~--~v~v~~~~~~~~~~~--~~~~ 155 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDF--FLGW-GSLES--K--N--VVVVRETADPKSAVK--ERLQ 155 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEE--EESE-EEEEE--T--T--EEEEESSSSTTSCEE--EEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--EEeE-EEEee--C--C--EEEEeecCCccCCCC--eEEE
Confidence 000 01233344443332 23344 5553 4443 44443 1 2 355541 00 00001 6899
Q ss_pred eCEEEEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhh---cCeeEE
Q 016519 138 GRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTSL 214 (388)
Q Consensus 138 ~d~li~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---~~~v~~ 214 (388)
||+||+||| ++|..|+++|.+. +++..++..... .+++++|||+|.+|+|+|..+.+. |.+|++
T Consensus 156 ~d~lViATG--s~p~~p~i~G~~~----------~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtl 222 (495)
T 2wpf_A 156 ADHILLATG--SWPQMPAIPGIEH----------CISSNEAFYLPE-PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTL 222 (495)
T ss_dssp EEEEEECCC--EEECCCCCTTGGG----------CEEHHHHTTCSS-CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEE
T ss_pred cCEEEEeCC--CCcCCCCCCCccc----------cccHHHHHhhhh-cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEE
Confidence 999999999 6888888888742 345544444333 378999999999999999999999 999999
Q ss_pred EEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC
Q 016519 215 VIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG 294 (388)
Q Consensus 215 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 294 (388)
+++.+ +.++.. ++.+...+.+.+++.+|+++.+
T Consensus 223 v~~~~---------~~l~~~--------------------------------------d~~~~~~l~~~l~~~GV~i~~~ 255 (495)
T 2wpf_A 223 CYRNN---------LILRGF--------------------------------------DETIREEVTKQLTANGIEIMTN 255 (495)
T ss_dssp EESSS---------SSCTTS--------------------------------------CHHHHHHHHHHHHHTTCEEEES
T ss_pred EEcCC---------cccccc--------------------------------------CHHHHHHHHHHHHhCCCEEEeC
Confidence 99988 333310 1111222245666778999887
Q ss_pred --ceEEEcC-----eEEeeCCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC
Q 016519 295 --IESIRGN-----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG 366 (388)
Q Consensus 295 --v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~ 366 (388)
|.+++.+ .+.+.+|+++++|.||+|+|++||+..+ ++......+++|++.+| +.++++.|+|||+|||++.
T Consensus 256 ~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~ 334 (495)
T 2wpf_A 256 ENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVD-EFSRTNVPNIYAIGDITDR 334 (495)
T ss_dssp CCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCC-TTCBCSSTTEEECGGGGCS
T ss_pred CEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEEC-CCCccCCCCEEEEeccCCC
Confidence 8888643 4677889899999999999999998645 45553344668999998 5577899999999999875
Q ss_pred c---ccchhhHHHHHHHhhh
Q 016519 367 L---YGAAADAQNIADHINS 383 (388)
Q Consensus 367 ~---~~a~~~~~~~a~~i~~ 383 (388)
+ ..|..||+.+|.+|..
T Consensus 335 ~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 335 LMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CCCHHHHHHHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHHHHHhcC
Confidence 3 3789999999999986
No 37
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.1e-33 Score=271.43 Aligned_cols=297 Identities=12% Similarity=0.142 Sum_probs=193.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
++||+|||||++|+++|..|++. |++|+|||+++.++ |.....+.. + .. ........++...++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~~-------~---~g-~~~~~~~~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPYY-------V---SG-EVSNIESLQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccchh-------h---cC-CCCchHHhccccchhc
Confidence 36999999999999999999998 89999999998654 111000000 0 00 0000000001112245
Q ss_pred HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcc-cCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 016519 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASN-LLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (388)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~ 163 (388)
.+.+.+.++.++.. +++++|+.++... ..+.+.... + +. .++.||+||+||| ++|..|+++|.+..
T Consensus 70 ~~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~~~~~~~g----~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~- 136 (472)
T 3iwa_A 70 RDPEFFRINKDVEA--LVETRAHAIDRAA--HTVEIENLRTG----ER--RTLKYDKLVLALG--SKANRPPVEGMDLA- 136 (472)
T ss_dssp -----------CEE--ECSEEEEEEETTT--TEEEEEETTTC----CE--EEEECSEEEECCC--EEECCCSCTTTTSB-
T ss_pred cCHHHHhhhcCcEE--EECCEEEEEECCC--CEEEEeecCCC----CE--EEEECCEEEEeCC--CCcCCCCCCCCCCC-
Confidence 56666666677776 8899999998754 555555421 2 11 5899999999999 68988988887522
Q ss_pred ccCCCCcceeeccCCCC-------CCCCCCCeEEEECCCCCHHHHHHHHHhh-cCeeEEEEecchhhhhHHHhhcCChhh
Q 016519 164 SSATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANH-AAKTSLVIRSPMVYLGLVLLRYVPCGG 235 (388)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-------~~~~~~~~v~VvG~G~~a~e~a~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~ 235 (388)
.+++.....+ .....+++++|||+|.+|+|+|..+.+. +.+|+++.+.+ .+++..+
T Consensus 137 -------~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~---------~~l~~~~ 200 (472)
T 3iwa_A 137 -------GVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD---------QIMPGFT 200 (472)
T ss_dssp -------TEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS---------SSSTTTS
T ss_pred -------CEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC---------ccccccc
Confidence 2333322111 1112378999999999999999999999 99999999988 3333111
Q ss_pred HHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc-Ce---EEeeCCc
Q 016519 236 VDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG-NE---VIFENGH 309 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~-~~---v~~~~g~ 309 (388)
.+.+...+.+.+++.+|+++.+ |.+++. ++ +.+.+|+
T Consensus 201 -------------------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~ 243 (472)
T 3iwa_A 201 -------------------------------------SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKR 243 (472)
T ss_dssp -------------------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSC
T ss_pred -------------------------------------CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCC
Confidence 1112222345666789999987 888875 32 6778999
Q ss_pred EEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEecccc-------C------cccchhhHHH
Q 016519 310 SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK-------G------LYGAAADAQN 376 (388)
Q Consensus 310 ~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~-------~------~~~a~~~~~~ 376 (388)
++++|.||+|+|++|++. +........+++|++.+| +.++++.|+|||+|||+. . ...|..||+.
T Consensus 244 ~i~aD~Vv~a~G~~p~~~-l~~~~gl~~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~ 321 (472)
T 3iwa_A 244 TLDADLVILAAGVSPNTQ-LARDAGLELDPRGAIIVD-TRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRV 321 (472)
T ss_dssp EEECSEEEECSCEEECCH-HHHHHTCCBCTTCCEECC-TTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHH
T ss_pred EEEcCEEEECCCCCcCHH-HHHhCCccCCCCCCEEEC-CCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHH
Confidence 999999999999999984 555543445678999998 567789999999999973 1 2368999999
Q ss_pred HHHHhhhc
Q 016519 377 IADHINSI 384 (388)
Q Consensus 377 ~a~~i~~~ 384 (388)
+|++|...
T Consensus 322 aa~~i~g~ 329 (472)
T 3iwa_A 322 IGTNLADG 329 (472)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99999864
No 38
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=2.6e-33 Score=269.67 Aligned_cols=305 Identities=18% Similarity=0.199 Sum_probs=201.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEee--------cCCCCccccc-CCcCceeeecCCc----cccCCCCCCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILER--------ENCYASIWKK-YSYDRLRLHLAKQ----FCQLPHLPFPS 72 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~--------~~~~gg~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~ 72 (388)
.++||+||||||+|+++|..|++.|++|+|||+ ...+||.|.. .+++...+..... ......+.+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 458999999999999999999999999999997 4568887652 2222221110000 00001111111
Q ss_pred CCCCCCCHHHHHHHHHHHH-----------HhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEE
Q 016519 73 SYPMFVSRAQFIEYLDHYV-----------SHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (388)
Q Consensus 73 ~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~l 141 (388)
..+...+...+..+.+.+. +..+++ .+...+..++ ...+.|.+.++.. .+++||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~i~g~~~~~~----~~~v~v~~~~g~~------~~~~~d~l 151 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK---YFNIKASFVD----EHTVRGVDKGGKA------TLLSAEHI 151 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECCEEEESS----SSEEEEECTTSCE------EEEEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEcc----CCeEEEEeCCCce------EEEECCEE
Confidence 1112344444444433322 233444 2333333322 2456666655422 68999999
Q ss_pred EEeecCCCCCCCCC-CCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 142 VVASGETSNPFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 142 i~AtG~~s~p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
|+||| ++|..|+ ++|.+.. .++..+...... .+++++|||+|.+|+|+|..+++.|.+|+++.|+..
T Consensus 152 ViATG--s~p~~p~~i~G~~~~---------~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (488)
T 3dgz_A 152 VIATG--GRPRYPTQVKGALEY---------GITSDDIFWLKE-SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP 219 (488)
T ss_dssp EECCC--EEECCCSSCBTHHHH---------CBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS
T ss_pred EEcCC--CCCCCCCCCCCcccc---------cCcHHHHHhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc
Confidence 99999 7999998 9887543 244444433333 377899999999999999999999999999998752
Q ss_pred hhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEE
Q 016519 221 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 298 (388)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~ 298 (388)
+ +.++..+ ...+.+.+++.+|+++.+ +.++
T Consensus 220 l-------~~~d~~~-----------------------------------------~~~l~~~l~~~gv~~~~~~~v~~i 251 (488)
T 3dgz_A 220 L-------RGFDQQM-----------------------------------------SSLVTEHMESHGTQFLKGCVPSHI 251 (488)
T ss_dssp S-------TTSCHHH-----------------------------------------HHHHHHHHHHTTCEEEETEEEEEE
T ss_pred c-------ccCCHHH-----------------------------------------HHHHHHHHHHCCCEEEeCCEEEEE
Confidence 2 1122221 222245666778998887 7777
Q ss_pred Ec---C--eEEeeC---Cc--EEeccEEEEccCCCCCCccc-ccCCCCccC-CCCCcCCCCCCCccCCCceEEEeccccC
Q 016519 299 RG---N--EVIFEN---GH--SHHFDSIVFCTGFKRSTNVW-LKGDDSMLN-DDGIPKQSYPNHWKGKNGLYCVGLSRKG 366 (388)
Q Consensus 299 ~~---~--~v~~~~---g~--~~~~D~vi~atG~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~~~~~~vy~~Gd~~~~ 366 (388)
+. + .+.+.+ |+ ++++|.||+|+|++||+..+ +.......+ ++|++.+| +.++++.|+|||+|||+.+
T Consensus 252 ~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~ 330 (488)
T 3dgz_A 252 KKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVD-AQEATSVPHIYAIGDVAEG 330 (488)
T ss_dssp EECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCC-TTSBCSSTTEEECGGGBTT
T ss_pred EEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeEC-CCCccCCCCEEEeEEecCC
Confidence 53 2 255544 55 47899999999999999554 344433345 68999998 6677899999999999742
Q ss_pred ----cccchhhHHHHHHHhhhc
Q 016519 367 ----LYGAAADAQNIADHINSI 384 (388)
Q Consensus 367 ----~~~a~~~~~~~a~~i~~~ 384 (388)
...|..+|+.+|.+|...
T Consensus 331 ~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 331 RPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp CCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCcchhHHHHHHHHHHHHHcCC
Confidence 337899999999999864
No 39
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=6.6e-33 Score=268.31 Aligned_cols=305 Identities=15% Similarity=0.143 Sum_probs=197.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC--------CCCccccc-CCcCceeeecCCcc----ccCCCCCCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN--------CYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFPS 72 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~--------~~gg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~ 72 (388)
.++||+||||||+|+++|..|++.|++|+|||+.+ .+||.|.. .+.+...+..+... .....+.+..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 35899999999999999999999999999999854 67876542 22222111100000 0001111111
Q ss_pred CCCCCCCHHHHHHHHHHH-----------HHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEE
Q 016519 73 SYPMFVSRAQFIEYLDHY-----------VSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (388)
Q Consensus 73 ~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~l 141 (388)
......+...+..+.+.+ .+..+++ .+...+..++ ...+.|.+.++.. .+++||+|
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~---~i~g~a~~~d----~~~v~v~~~~g~~------~~i~~d~l 177 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV---YENAYGQFIG----PHRIKATNNKGKE------KIYSAERF 177 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEE----TTEEEEECTTCCC------CEEEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEee----CCEEEEEcCCCCE------EEEECCEE
Confidence 111123444444444332 2333444 2333344333 2455666655422 58999999
Q ss_pred EEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchh
Q 016519 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMV 221 (388)
Q Consensus 142 i~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~ 221 (388)
|+||| ++|..|+++|.+.+ .++..+...... .+++++|||+|.+|+|+|..+++.|.+|+++.|+..+
T Consensus 178 ViATG--s~p~~p~i~G~~~~---------~~t~~~~~~l~~-~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l 245 (519)
T 3qfa_A 178 LIATG--ERPRYLGIPGDKEY---------CISSDDLFSLPY-CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL 245 (519)
T ss_dssp EECCC--EEECCCCCTTHHHH---------CBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS
T ss_pred EEECC--CCcCCCCCCCccCc---------eEcHHHHhhhhh-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc
Confidence 99999 79999999986543 344444444333 3677999999999999999999999999999985421
Q ss_pred hhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEE
Q 016519 222 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 299 (388)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~ 299 (388)
+.++..+ ...+.+.+++.+|+++.+ +.++.
T Consensus 246 -------~~~d~~~-----------------------------------------~~~~~~~l~~~GV~v~~~~~v~~v~ 277 (519)
T 3qfa_A 246 -------RGFDQDM-----------------------------------------ANKIGEHMEEHGIKFIRQFVPIKVE 277 (519)
T ss_dssp -------TTSCHHH-----------------------------------------HHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred -------ccCCHHH-----------------------------------------HHHHHHHHHHCCCEEEeCCeEEEEE
Confidence 1122221 222245566778888877 44443
Q ss_pred ---c---CeE--Ee--eCCc---EEeccEEEEccCCCCCCccc-ccCCCCccC-CCCCcCCCCCCCccCCCceEEEeccc
Q 016519 300 ---G---NEV--IF--ENGH---SHHFDSIVFCTGFKRSTNVW-LKGDDSMLN-DDGIPKQSYPNHWKGKNGLYCVGLSR 364 (388)
Q Consensus 300 ---~---~~v--~~--~~g~---~~~~D~vi~atG~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~~~~~~vy~~Gd~~ 364 (388)
. +.+ .+ .+|. ++++|.||+|+|++||+..+ +.......+ ++|++.+| +.++++.|+|||+|||+
T Consensus 278 ~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd-~~~~Ts~~~IyA~GD~~ 356 (519)
T 3qfa_A 278 QIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVT-DEEQTNVPYIYAIGDIL 356 (519)
T ss_dssp EEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCC-TTSBCSSTTEEECGGGB
T ss_pred EccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeC-CCCccCCCCEEEEEecc
Confidence 2 222 22 3552 56899999999999998654 444433344 57999999 55778999999999998
Q ss_pred -cC---cccchhhHHHHHHHhhhc
Q 016519 365 -KG---LYGAAADAQNIADHINSI 384 (388)
Q Consensus 365 -~~---~~~a~~~~~~~a~~i~~~ 384 (388)
.. ...|..+|+.+|++|...
T Consensus 357 ~g~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 357 EDKVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCccHHHHHHHHHHHHHHHcCC
Confidence 33 337899999999999864
No 40
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.7e-35 Score=269.14 Aligned_cols=275 Identities=16% Similarity=0.225 Sum_probs=194.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (388)
.||+||||||+|+++|..|++.| +|+|||+++..+ |.....+ ..+ .. ..+.+++..+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~~l~-------~~~---~g---------~~~~~~~~~~~ 66 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKPMLS-------HYI---AG---------FIPRNRLFPYS 66 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCSTTHH-------HHH---TT---------SSCGGGGCSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccchhH-------HHH---hC---------CCCHHHhccCC
Confidence 59999999999999999999999 999999987543 1100000 000 00 01111121222
Q ss_pred HHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccCC
Q 016519 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSAT 167 (388)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~~ 167 (388)
.+++++.+++. +.+++|+.++.. .++|. .++ .+++||+||+||| ++|..|+++|.+.
T Consensus 67 ~~~~~~~~v~~--~~g~~v~~id~~----~~~V~-~~g--------~~~~~d~lViATG--s~p~~p~i~G~~~------ 123 (367)
T 1xhc_A 67 LDWYRKRGIEI--RLAEEAKLIDRG----RKVVI-TEK--------GEVPYDTLVLATG--ARAREPQIKGKEY------ 123 (367)
T ss_dssp HHHHHHHTEEE--ECSCCEEEEETT----TTEEE-ESS--------CEEECSEEEECCC--EEECCCCSBTGGG------
T ss_pred HHHHHhCCcEE--EECCEEEEEECC----CCEEE-ECC--------cEEECCEEEECCC--CCCCCCCCCCcCC------
Confidence 33445667765 788889888753 24566 443 6899999999999 6898898888332
Q ss_pred CCcceeeccCCCCCCCC-----CCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHH
Q 016519 168 GTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVM 242 (388)
Q Consensus 168 ~~~~~~~~~~~~~~~~~-----~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (388)
+++.....+...+ .+++++|||+|.+|+|+|..|++.|.+|+++++.+ +.++ +-
T Consensus 124 ----v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~---------~~l~--~~------ 182 (367)
T 1xhc_A 124 ----LLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA---------MFLG--LD------ 182 (367)
T ss_dssp ----EECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS---------CCTT--CC------
T ss_pred ----EEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC---------eecc--CC------
Confidence 3433322221111 35899999999999999999999999999999988 2222 11
Q ss_pred HHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEEeeCCcEEeccEEEEcc
Q 016519 243 LSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSHHFDSIVFCT 320 (388)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~~~~D~vi~at 320 (388)
+.+...+.+.+++.+|+++.+ +.+++.+.+.+++|+ +++|.||+|+
T Consensus 183 -------------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~ 230 (367)
T 1xhc_A 183 -------------------------------EELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVKICAI 230 (367)
T ss_dssp -------------------------------HHHHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCEEEEC
T ss_pred -------------------------------HHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECc
Confidence 111122245666789999988 888887889999988 9999999999
Q ss_pred CCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-------cccchhhHHHHHHHhhhc
Q 016519 321 GFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------LYGAAADAQNIADHINSI 384 (388)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~-------~~~a~~~~~~~a~~i~~~ 384 (388)
|++||++ +++.. ++...+| +.+| +.++++.|+|||+|||+.. ...|..||+.+|.+|...
T Consensus 231 G~~p~~~-ll~~~-gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 231 GIVPNVD-LARRS-GIHTGRG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp CEEECCH-HHHHT-TCCBSSS-EECC-TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred CCCcCHH-HHHhC-CCCCCCC-EEEC-CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 9999984 55554 3333345 7777 5677899999999999642 347999999999999864
No 41
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=8e-33 Score=265.10 Aligned_cols=306 Identities=15% Similarity=0.166 Sum_probs=203.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecCC----cccc-CCCCCCCCCCCCCCCH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQ-LPHLPFPSSYPMFVSR 80 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~ 80 (388)
++||+|||||++|+++|..|++.|++|+|||+.+.+||.|.. .+.+...+.... .+.. +..+..+.......+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 489999999999999999999999999999999889987652 111111000000 0000 0000000000000122
Q ss_pred HH-----------HHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 81 AQ-----------FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 81 ~~-----------~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
.. +...+...+++.+++. +.++.+ .++ . +.+.|.+.++.. .+++||+||+||| +
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i~--~--~~~~v~~~~G~~------~~~~~d~lviAtG--~ 146 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTY--YKGEGS-FET--A--HSIRVNGLDGKQ------EMLETKKTIIATG--S 146 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EEEEEE-EEE--T--TEEEEEETTSCE------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEE-Eee--C--CEEEEEecCCce------EEEEcCEEEECCC--C
Confidence 22 2223345556667665 555533 332 2 567777665421 5799999999999 6
Q ss_pred CCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhh
Q 016519 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLR 229 (388)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~ 229 (388)
+|..|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+++ +
T Consensus 147 ~p~~p~~~g~~~~--------~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~---------~ 208 (468)
T 2qae_A 147 EPTELPFLPFDEK--------VVLSSTGALALPR-VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP---------R 208 (468)
T ss_dssp EECCBTTBCCCSS--------SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------S
T ss_pred CcCCCCCCCCCcC--------ceechHHHhhccc-CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC---------c
Confidence 8888888776431 3455554444333 47899999999999999999999999999999998 3
Q ss_pred cCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhh-cCCcEEEecC--ceEEEcC----e
Q 016519 230 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKI-KSGQIQVLPG--IESIRGN----E 302 (388)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--v~~~~~~----~ 302 (388)
++|.. ++.+...+.+.+ ++.+|+++.+ |.+++.+ .
T Consensus 209 ~l~~~--------------------------------------d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~ 250 (468)
T 2qae_A 209 CAPTL--------------------------------------DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVS 250 (468)
T ss_dssp SSTTS--------------------------------------CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEE
T ss_pred ccccC--------------------------------------CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEE
Confidence 33310 111122224556 6788999987 8888753 2
Q ss_pred EEee--CC--cEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEecccc-Cc---ccchhh
Q 016519 303 VIFE--NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK-GL---YGAAAD 373 (388)
Q Consensus 303 v~~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~-~~---~~a~~~ 373 (388)
+.+. +| +++++|.||+|+|++||+..+ ++......+++|++.+| +.++++.|+|||+|||+. .+ ..|..|
T Consensus 251 v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~ 329 (468)
T 2qae_A 251 LEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIG-DHFETSIPDVYAIGDVVDKGPMLAHKAEDE 329 (468)
T ss_dssp EEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGBSSSCSCHHHHHHH
T ss_pred EEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeEC-CCcccCCCCEEEeeccCCCCCccHhHHHHH
Confidence 4444 66 678999999999999998543 34442334667999998 557789999999999988 43 379999
Q ss_pred HHHHHHHhhhc
Q 016519 374 AQNIADHINSI 384 (388)
Q Consensus 374 ~~~~a~~i~~~ 384 (388)
|+.+|.+|...
T Consensus 330 g~~aa~~i~~~ 340 (468)
T 2qae_A 330 GVACAEILAGK 340 (468)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 99999999864
No 42
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.4e-33 Score=277.65 Aligned_cols=292 Identities=16% Similarity=0.252 Sum_probs=211.6
Q ss_pred CCCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (388)
..+||+|||||++|+++|..|++. +.+|+|||+++..+ |.... .+... .. . .......+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~--lp~~~---~g-----~--~~~~~~~~ 95 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCG--LPYYI---GG-----V--ITERQKLL 95 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGG--HHHHH---TT-----S--SCCGGGGB
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCC--Cchhh---cC-----c--CCChHHhh
Confidence 357999999999999999999998 89999999998665 11100 00000 00 0 00122334
Q ss_pred HHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 016519 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (388)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~ 163 (388)
..+++++.+++++.. +++++|+.++... ..+.+..... ++. .++.||+||+||| ++|..|+++|.+..
T Consensus 96 ~~~~~~~~~~~gi~v--~~~~~V~~id~~~--~~v~v~~~~~---g~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~- 163 (588)
T 3ics_A 96 VQTVERMSKRFNLDI--RVLSEVVKINKEE--KTITIKNVTT---NET--YNEAYDVLILSPG--AKPIVPSIPGIEEA- 163 (588)
T ss_dssp SSCHHHHHHHTTCEE--ECSEEEEEEETTT--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCCTTTTTC-
T ss_pred ccCHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEeecCC---CCE--EEEeCCEEEECCC--CCCCCCCCCCcccC-
Confidence 556777788888876 8999999998754 5655554221 111 5789999999999 68998999887322
Q ss_pred ccCCCCcceeeccCCCCCC-------CCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhH
Q 016519 164 SSATGTGEVIHSTQYKNGK-------PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGV 236 (388)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-------~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~ 236 (388)
..+++.....+.. ...+++++|||+|.+|+|+|..+++.|.+|+++.+.+ ++++. +
T Consensus 164 ------~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~---------~~l~~-~- 226 (588)
T 3ics_A 164 ------KALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN---------QVMPP-I- 226 (588)
T ss_dssp ------TTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------SSCTT-S-
T ss_pred ------CCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC---------ccccc-C-
Confidence 1244443322211 1347899999999999999999999999999999988 33332 0
Q ss_pred HHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc--CeEEeeCCcEEe
Q 016519 237 DTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NEVIFENGHSHH 312 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~v~~~~g~~~~ 312 (388)
++.+...+.+.+++.+|+++.+ |.+++. +.+.+.+|++++
T Consensus 227 ------------------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~ 270 (588)
T 3ics_A 227 ------------------------------------DYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQ 270 (588)
T ss_dssp ------------------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEE
T ss_pred ------------------------------------CHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEE
Confidence 1111222245666789999887 888876 578899999999
Q ss_pred ccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEecccc------C-------cccchhhHHHHHH
Q 016519 313 FDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK------G-------LYGAAADAQNIAD 379 (388)
Q Consensus 313 ~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~------~-------~~~a~~~~~~~a~ 379 (388)
+|.||+|+|++|++ .+++......+++|++.+| +.++++.|+|||+|||+. + ...|..||+.+|+
T Consensus 271 ~D~Vi~a~G~~p~~-~~l~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~ 348 (588)
T 3ics_A 271 TDMLILAIGVQPES-SLAKGAGLALGVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLAD 348 (588)
T ss_dssp CSEEEECSCEEECC-HHHHHTTCCBCGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHH
T ss_pred cCEEEEccCCCCCh-HHHHhcCceEcCCCCEEEC-CccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHH
Confidence 99999999999998 4555553445678999998 667889999999999983 1 2268999999999
Q ss_pred Hhhh
Q 016519 380 HINS 383 (388)
Q Consensus 380 ~i~~ 383 (388)
+|..
T Consensus 349 ~i~g 352 (588)
T 3ics_A 349 IIHG 352 (588)
T ss_dssp HHTT
T ss_pred HhcC
Confidence 9986
No 43
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.1e-33 Score=269.83 Aligned_cols=307 Identities=16% Similarity=0.202 Sum_probs=201.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCC------CCccccc-CCcCceeeecCC-cccc----CCCCCCCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENC------YASIWKK-YSYDRLRLHLAK-QFCQ----LPHLPFPSS 73 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~------~gg~~~~-~~~~~~~~~~~~-~~~~----~~~~~~~~~ 73 (388)
.+|||+||||||+|+++|..|++.|++|+|||+.+. +||.|.. .+.+...+.... .... +..+.+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 358999999999999999999999999999999873 4554431 111111000000 0000 000000000
Q ss_pred CCCCCCHHHHHH-----------HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEE
Q 016519 74 YPMFVSRAQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLV 142 (388)
Q Consensus 74 ~~~~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li 142 (388)
....+...+.. .++...++.+++. ..+. +..+ +...+.|...++.. .++.||+||
T Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~----~~~~~~v~~~~g~~------~~~~~d~lv 147 (476)
T 3lad_A 82 -EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTL--FEGH-GKLL----AGKKVEVTAADGSS------QVLDTENVI 147 (476)
T ss_dssp -CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESE-EEEC----STTCEEEECTTSCE------EEECCSCEE
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEe----cCCEEEEEcCCCce------EEEEcCEEE
Confidence 01112222222 2233444456554 4433 2222 23567777665422 689999999
Q ss_pred EeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhh
Q 016519 143 VASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVY 222 (388)
Q Consensus 143 ~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~ 222 (388)
+||| ++|..|+..+.+. ..++++.+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+++
T Consensus 148 lAtG--~~p~~~~~~~~~~--------~~v~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~--- 213 (476)
T 3lad_A 148 LASG--SKPVEIPPAPVDQ--------DVIVDSTGALDFQN-VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD--- 213 (476)
T ss_dssp ECCC--EEECCCTTSCCCS--------SSEEEHHHHTSCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---
T ss_pred EcCC--CCCCCCCCCCCCc--------ccEEechhhhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC---
Confidence 9999 6777665544332 24566655444333 47899999999999999999999999999999998
Q ss_pred hhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc
Q 016519 223 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 300 (388)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~ 300 (388)
++++.. ++.+...+.+.+++.+|+++.+ +.+++.
T Consensus 214 ------~~l~~~--------------------------------------~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~ 249 (476)
T 3lad_A 214 ------KFLPAV--------------------------------------DEQVAKEAQKILTKQGLKILLGARVTGTEV 249 (476)
T ss_dssp ------SSSTTS--------------------------------------CHHHHHHHHHHHHHTTEEEEETCEEEEEEE
T ss_pred ------CcCccc--------------------------------------CHHHHHHHHHHHHhCCCEEEECCEEEEEEE
Confidence 333311 1112222345667789999987 888774
Q ss_pred C----eEEeeCC---cEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---cc
Q 016519 301 N----EVIFENG---HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YG 369 (388)
Q Consensus 301 ~----~v~~~~g---~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~ 369 (388)
+ .+.+.++ +++++|.||+|+|++||+..+ +.......+++|++.+| +.++++.|+|||+|||++.+ ..
T Consensus 250 ~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~ 328 (476)
T 3lad_A 250 KNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVD-DYCATSVPGVYAIGDVVRGAMLAHK 328 (476)
T ss_dssp CSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCC-TTSBCSSTTEEECGGGSSSCCCHHH
T ss_pred cCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeC-CCcccCCCCEEEEEccCCCcccHHH
Confidence 3 2566654 678999999999999999655 44553445778999999 55778999999999998653 48
Q ss_pred chhhHHHHHHHhhhcc
Q 016519 370 AAADAQNIADHINSIL 385 (388)
Q Consensus 370 a~~~~~~~a~~i~~~l 385 (388)
|..+|+.+|.+|....
T Consensus 329 A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 329 ASEEGVVVAERIAGHK 344 (476)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCCC
Confidence 9999999999998643
No 44
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=9.9e-35 Score=270.35 Aligned_cols=274 Identities=15% Similarity=0.137 Sum_probs=195.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 5 ~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
..+.+|+|||||++|+++|..|...+.+|+|||+++..+. .+.. .+..+ ....+.+++.
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y-------~~~~--l~~~l------------~g~~~~~~l~ 65 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY-------YRPR--LNEII------------AKNKSIDDIL 65 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB-------CGGG--HHHHH------------HSCCCGGGTB
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc-------ccCh--hhHHH------------cCCCCHHHcc
Confidence 3457999999999999999999878899999999886551 1100 00000 0011122222
Q ss_pred HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
.+..+++++.+++. +++++|++++... . +|++.++ .++.||+||+||| ++|..|+++|.+.
T Consensus 66 ~~~~~~~~~~~i~~--~~~~~V~~id~~~--~--~v~~~~g--------~~~~yd~lvlAtG--~~p~~p~i~G~~~--- 126 (385)
T 3klj_A 66 IKKNDWYEKNNIKV--ITSEFATSIDPNN--K--LVTLKSG--------EKIKYEKLIIASG--SIANKIKVPHADE--- 126 (385)
T ss_dssp SSCHHHHHHTTCEE--ECSCCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--EEECCCCCTTCSC---
T ss_pred CCCHHHHHHCCCEE--EeCCEEEEEECCC--C--EEEECCC--------CEEECCEEEEecC--CCcCCCCCCCCCC---
Confidence 33344556678776 8899999998654 3 4777775 6899999999999 6899898888652
Q ss_pred cCCCCcceeeccCCCCCCCC-----CCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHH
Q 016519 165 SATGTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTL 239 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~-----~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
+++.....+...+ .+++++|||+|.+|+|+|..|++.|.+|+++++++ ++++..+-..
T Consensus 127 -------v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~---------~~l~~~~~~~- 189 (385)
T 3klj_A 127 -------IFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE---------YPLERQLDRD- 189 (385)
T ss_dssp -------EECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS---------SSCTTTSCHH-
T ss_pred -------eEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC---------ccchhhcCHH-
Confidence 3333322221111 26899999999999999999999999999999998 3333211111
Q ss_pred HHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEEeeCCcEEeccEEE
Q 016519 240 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSHHFDSIV 317 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~~~~D~vi 317 (388)
....+.+.+++.+|+++.+ +.++ |+++++|+||
T Consensus 190 ------------------------------------~~~~~~~~l~~~gV~~~~~~~v~~i---------g~~~~~D~vv 224 (385)
T 3klj_A 190 ------------------------------------GGLFLKDKLDRLGIKIYTNSNFEEM---------GDLIRSSCVI 224 (385)
T ss_dssp ------------------------------------HHHHHHHHHHTTTCEEECSCCGGGC---------HHHHHHSEEE
T ss_pred ------------------------------------HHHHHHHHHHhCCCEEEeCCEEEEc---------CeEEecCeEE
Confidence 1122245666788998877 6655 6789999999
Q ss_pred EccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-------cccchhhHHHHHHHhhhc
Q 016519 318 FCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------LYGAAADAQNIADHINSI 384 (388)
Q Consensus 318 ~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~-------~~~a~~~~~~~a~~i~~~ 384 (388)
+|+|++||+ .++... .+...+| +.+| +.++++.|+|||+|||+.. ...|..||+.+|.+|...
T Consensus 225 ~a~G~~p~~-~~~~~~-gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 225 TAVGVKPNL-DFIKDT-EIASKRG-ILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp ECCCEEECC-GGGTTS-CCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTC
T ss_pred ECcCcccCh-hhhhhc-CCCcCCC-EEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 999999998 555555 3444455 7777 6778899999999999762 348999999999999864
No 45
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.5e-33 Score=270.46 Aligned_cols=309 Identities=15% Similarity=0.115 Sum_probs=208.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhc---CCCEEEEeecCCCCccccc-CCcCceeeecCC----ccccCCCCCCCC-CCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ---SIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPS-SYPMF 77 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~---g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~ 77 (388)
++||+|||||++|+++|..|++. |++|+|||+.+ +||.|.. .+.+...+.... .+..+.....+. .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 37999999999999999999999 99999999988 8886542 222111000000 000111111110 00001
Q ss_pred CCHHH-----------HHHHHHHHHHhcCCcceeEeceEEEEEEEeC--CCCcEEEEEcccCCCCceeeEEEeeCEEEEe
Q 016519 78 VSRAQ-----------FIEYLDHYVSHFNIVPSIRYQRSVESASYDE--ATNMWNVKASNLLSPGRVIEEYYSGRFLVVA 144 (388)
Q Consensus 78 ~~~~~-----------~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~d~li~A 144 (388)
.+... +..++...+++.+++. +.+. +..++..+ +.+.+.|.+.++.. .++.+|+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~i~~~~~~~~~~~~V~~~~g~~------~~~~~d~lviA 151 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQV--IAGR-GELIDSTPGLARHRIKATAADGST------SEHEADVVLVA 151 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEECCSSSCCSSEEEEEECTTSCE------EEEEESEEEEC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEecCcccCCCCEEEEEeCCCcE------EEEEeCEEEEc
Confidence 12222 2233455666677765 5554 55554310 01456666655411 37999999999
Q ss_pred ecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhh
Q 016519 145 SGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLG 224 (388)
Q Consensus 145 tG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~ 224 (388)
|| ++|..|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+
T Consensus 152 TG--s~p~~p~i~g~~~~--------~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~----- 215 (499)
T 1xdi_A 152 TG--ASPRILPSAQPDGE--------RILTWRQLYDLDA-LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD----- 215 (499)
T ss_dssp CC--EEECCCGGGCCCSS--------SEEEGGGGGGCSS-CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-----
T ss_pred CC--CCCCCCCCCCCCcC--------cEEehhHhhhhhc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-----
Confidence 99 68888888876532 3556555544333 37899999999999999999999999999999998
Q ss_pred HHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe
Q 016519 225 LVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE 302 (388)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~ 302 (388)
..+|. + ++.+...+.+.+++.+|+++.+ |.+++.+.
T Consensus 216 ----~~l~~-~-------------------------------------d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~ 253 (499)
T 1xdi_A 216 ----HVLPY-E-------------------------------------DADAALVLEESFAERGVRLFKNARAASVTRTG 253 (499)
T ss_dssp ----SSSCC-S-------------------------------------SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS
T ss_pred ----ccccc-c-------------------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC
Confidence 33331 0 1112222345667789999988 88887542
Q ss_pred ----EEeeCCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---ccchhhH
Q 016519 303 ----VIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YGAAADA 374 (388)
Q Consensus 303 ----v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~a~~~~ 374 (388)
+.+.+|+++++|.||+|+|++||++.+ ++......+++|++.+| +.++++.|+|||+|||+... ..|..||
T Consensus 254 ~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g 332 (499)
T 1xdi_A 254 AGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVD-RVSRTLATGIYAAGDCTGLLPLASVAAMQG 332 (499)
T ss_dssp SSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCC-SSSBCSSTTEEECSGGGTSCSCHHHHHHHH
T ss_pred CEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHH
Confidence 455678899999999999999998543 44543344667999998 55778999999999998753 3799999
Q ss_pred HHHHHHhhhc
Q 016519 375 QNIADHINSI 384 (388)
Q Consensus 375 ~~~a~~i~~~ 384 (388)
+.+|.+|...
T Consensus 333 ~~aa~~i~g~ 342 (499)
T 1xdi_A 333 RIAMYHALGE 342 (499)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 9999999864
No 46
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.5e-33 Score=269.24 Aligned_cols=302 Identities=17% Similarity=0.184 Sum_probs=201.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecC----CccccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
++||+|||||++|+++|..|++.|++|+|||+. .+||.|.. .+.+...+... ..+..+..+..+.... ..+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENV-TIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSC-EECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-ccCHH
Confidence 489999999999999999999999999999998 67876642 11111100000 0000000000000000 01111
Q ss_pred -----------HHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 82 -----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 82 -----------~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
.+.+++...+++.+++. +.++.+. + +. +.+.|.+.++ . .+++||+||+||| ++
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-i--d~--~~v~V~~~~G----~---~~i~~d~lViATG--s~ 144 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEI--VKGEAYF-V--DA--NTVRVVNGDS----A---QTYTFKNAIIATG--SR 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEE--EESEEEE-E--ET--TEEEEEETTE----E---EEEECSEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEE-c--cC--CeEEEEeCCC----c---EEEEeCEEEEecC--CC
Confidence 13334455666667665 6666543 3 22 5677777653 1 4789999999999 68
Q ss_pred CCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhc
Q 016519 151 PFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRY 230 (388)
Q Consensus 151 p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~ 230 (388)
|..|+++|.+. .+++..+...... .+++++|||+|.+|+|+|..|++.|.+|+++++++ ++
T Consensus 145 p~~~~~~g~~~---------~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~---------~~ 205 (455)
T 1ebd_A 145 PIELPNFKFSN---------RILDSTGALNLGE-VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG---------EI 205 (455)
T ss_dssp ECCBTTBCCCS---------SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------SS
T ss_pred CCCCCCCCccc---------eEecHHHHhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC---------cc
Confidence 88888777542 1455544433333 37899999999999999999999999999999988 33
Q ss_pred CChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC--eE--E
Q 016519 231 VPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--EV--I 304 (388)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~v--~ 304 (388)
+|.. ++.+...+.+.+++.+|+++.+ |.+++.+ .+ .
T Consensus 206 l~~~--------------------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~ 247 (455)
T 1ebd_A 206 LSGF--------------------------------------EKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVT 247 (455)
T ss_dssp STTS--------------------------------------CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEE
T ss_pred cccc--------------------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEE
Confidence 3210 0111122245566678898887 7787642 23 3
Q ss_pred ee---CCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---ccchhhHHHH
Q 016519 305 FE---NGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YGAAADAQNI 377 (388)
Q Consensus 305 ~~---~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~a~~~~~~~ 377 (388)
+. +++++++|.||+|+|++||++.+ ++......+++|++.+| +.++++.|+|||+|||+... ..|..||+.+
T Consensus 248 ~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~a 326 (455)
T 1ebd_A 248 YEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVD-QQCRTSVPNIFAIGDIVPGPALAHKASYEGKVA 326 (455)
T ss_dssp EEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHH
T ss_pred EEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHH
Confidence 33 45689999999999999998543 44443334667999998 45778999999999998753 3789999999
Q ss_pred HHHhhhc
Q 016519 378 ADHINSI 384 (388)
Q Consensus 378 a~~i~~~ 384 (388)
|.+|...
T Consensus 327 a~~i~~~ 333 (455)
T 1ebd_A 327 AEAIAGH 333 (455)
T ss_dssp HHHHTSC
T ss_pred HHHHcCC
Confidence 9999864
No 47
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.6e-33 Score=264.29 Aligned_cols=285 Identities=17% Similarity=0.233 Sum_probs=196.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
++||+|||||++|+++|..|++. +.+|+|||+.+..+.... .++ ..........++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~----------------~~p-----~~~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC----------------GIP-----YVVEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc----------------CCc-----cccCCCCCHHHhh
Confidence 37999999999999999999998 789999999886542110 000 0111111222333
Q ss_pred HHH-HHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 016519 85 EYL-DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (388)
Q Consensus 85 ~~l-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~ 163 (388)
.+. +++.++.+++. +++++|+.++. +.+.|.+.++ . .++.||+||+||| ++|..|+++|.+..
T Consensus 62 ~~~~~~~~~~~gi~v--~~~~~v~~i~~----~~~~v~~~~g----~---~~~~~d~lviAtG--~~p~~p~i~G~~~~- 125 (449)
T 3kd9_A 62 YYPPEVFIKKRGIDL--HLNAEVIEVDT----GYVRVRENGG----E---KSYEWDYLVFANG--ASPQVPAIEGVNLK- 125 (449)
T ss_dssp ----CTHHHHTTCEE--ETTCEEEEECS----SEEEEECSSS----E---EEEECSEEEECCC--EEECCCSCBTTTST-
T ss_pred hcCHHHHHHhcCcEE--EecCEEEEEec----CCCEEEECCc----e---EEEEcCEEEECCC--CCCCCCCCCCCCCC-
Confidence 332 34446778776 88989988864 3466765442 1 4899999999999 68888988887532
Q ss_pred ccCCCCcceeeccCCCC-------CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhH
Q 016519 164 SSATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGV 236 (388)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-------~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~ 236 (388)
.+++.....+ .....+++++|||+|.+|+|+|..+.+.|.+|+++.|++ ++++..+.
T Consensus 126 -------~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~---------~~l~~~~~ 189 (449)
T 3kd9_A 126 -------GVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE---------RVLRRSFD 189 (449)
T ss_dssp -------TEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------STTTTTSC
T ss_pred -------CEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC---------ccchhhcC
Confidence 2232221111 112257899999999999999999999999999999998 33332111
Q ss_pred HHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe---EEeeCCcEE
Q 016519 237 DTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE---VIFENGHSH 311 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~---v~~~~g~~~ 311 (388)
+.+...+.+.+++. |+++.+ +.+++.+. .+..+++++
T Consensus 190 -------------------------------------~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i 231 (449)
T 3kd9_A 190 -------------------------------------KEVTDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGEY 231 (449)
T ss_dssp -------------------------------------HHHHHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEEE
T ss_pred -------------------------------------HHHHHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEE
Confidence 11112224555556 888776 77777543 456788899
Q ss_pred eccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEecccc------C-------cccchhhHHHHH
Q 016519 312 HFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK------G-------LYGAAADAQNIA 378 (388)
Q Consensus 312 ~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~------~-------~~~a~~~~~~~a 378 (388)
++|.||+|+|++||+ .+++......+++|++.+| +.++++.|+|||+|||+. + ...|..+|+.+|
T Consensus 232 ~~D~Vv~a~G~~p~~-~l~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa 309 (449)
T 3kd9_A 232 KAELVILATGIKPNI-ELAKQLGVRIGETGAIWTN-EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAG 309 (449)
T ss_dssp ECSEEEECSCEEECC-HHHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHH
T ss_pred ECCEEEEeeCCccCH-HHHHhCCccCCCCCCEEEC-CCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHH
Confidence 999999999999998 4555553445778999999 567789999999999974 1 237999999999
Q ss_pred HHhhhc
Q 016519 379 DHINSI 384 (388)
Q Consensus 379 ~~i~~~ 384 (388)
.+|...
T Consensus 310 ~~i~g~ 315 (449)
T 3kd9_A 310 SNIAGK 315 (449)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 999864
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.8e-33 Score=264.24 Aligned_cols=285 Identities=18% Similarity=0.190 Sum_probs=200.2
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCC--EEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (388)
.++||+|||||++|+++|..|+++|++ |+|||+++..+.. ... ....+ . ........+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~-------~~~--l~~~~-----~------~~~~~~~~~ 67 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE-------RPP--LSKEY-----L------AREKTFERI 67 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC-------SGG--GGTTT-----T------TTSSCSGGG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC-------ccc--CCHHH-----H------cCCCCHHHh
Confidence 458999999999999999999999986 9999998865421 100 00000 0 000111122
Q ss_pred HHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 016519 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (388)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~ 163 (388)
..+...+.++.+++. +.+++|+.++... ..|.+.++ .++.||+||+||| +.|..|+++|.+..
T Consensus 68 ~~~~~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g--------~~~~~d~lvlAtG--~~~~~~~i~g~~~~- 130 (415)
T 3lxd_A 68 CIRPAQFWEDKAVEM--KLGAEVVSLDPAA----HTVKLGDG--------SAIEYGKLIWATG--GDPRRLSCVGADLA- 130 (415)
T ss_dssp BSSCHHHHHHTTEEE--EETCCEEEEETTT----TEEEETTS--------CEEEEEEEEECCC--EECCCCBTTSSCCB-
T ss_pred ccCCHHHHHHCCcEE--EeCCEEEEEECCC----CEEEECCC--------CEEEeeEEEEccC--CccCCCCCCCcccc-
Confidence 222334455667766 8888999987643 35777665 6899999999999 68998988886532
Q ss_pred ccCCCCcceeeccCCCC-----CCCCC-CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHH
Q 016519 164 SSATGTGEVIHSTQYKN-----GKPYG-GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVD 237 (388)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-----~~~~~-~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~ 237 (388)
.+++.....+ ..... +++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..+-
T Consensus 131 -------~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~---------~~l~~~~~- 193 (415)
T 3lxd_A 131 -------GVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP---------RVLARVAG- 193 (415)
T ss_dssp -------TEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------STTTTTSC-
T ss_pred -------CEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC---------chhhhhcC-
Confidence 2222221111 01113 7899999999999999999999999999999998 33321111
Q ss_pred HHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-----eEEeeCCcE
Q 016519 238 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIFENGHS 310 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~~g~~ 310 (388)
+.+...+.+.+++.+|+++.+ |++++.+ .+.+.+|++
T Consensus 194 ------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~ 237 (415)
T 3lxd_A 194 ------------------------------------EALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSV 237 (415)
T ss_dssp ------------------------------------HHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCE
T ss_pred ------------------------------------HHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCE
Confidence 111222245566788999877 8888754 478889999
Q ss_pred EeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc--------------ccchhhHHH
Q 016519 311 HHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL--------------YGAAADAQN 376 (388)
Q Consensus 311 ~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~--------------~~a~~~~~~ 376 (388)
+++|.||+|+|+.|++ .++... ++...+| +.++ +.++++.|+|||+|||+... ..|..||+.
T Consensus 238 i~aD~Vv~a~G~~p~~-~l~~~~-gl~~~~g-i~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~ 313 (415)
T 3lxd_A 238 IPADIVIVGIGIVPCV-GALISA-GASGGNG-VDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATA 313 (415)
T ss_dssp EECSEEEECSCCEESC-HHHHHT-TCCCSSS-EECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHH
T ss_pred EEcCEEEECCCCccCh-HHHHhC-CCCcCCC-EEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHH
Confidence 9999999999999998 455544 3333355 7777 56788999999999997632 468999999
Q ss_pred HHHHhhhc
Q 016519 377 IADHINSI 384 (388)
Q Consensus 377 ~a~~i~~~ 384 (388)
+|.+|...
T Consensus 314 aa~~i~g~ 321 (415)
T 3lxd_A 314 AAKDICGA 321 (415)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99999875
No 49
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=6.5e-33 Score=260.77 Aligned_cols=286 Identities=18% Similarity=0.186 Sum_probs=196.1
Q ss_pred CcccCCCCeEEEECCChHHHHHHHHHhhcCC--CEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCC
Q 016519 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFV 78 (388)
Q Consensus 1 m~~~~~~~dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (388)
|+....++||+|||||++|+++|..|++.|. +|+|||+++..+. ... ..+..+..-.. +...
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~-------~~~--~~~~~~~~~~~---~~~~---- 64 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPY-------DRP--PLSKDFMAHGD---AEKI---- 64 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCB-------CSG--GGGTHHHHHCC---GGGS----
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcc-------cCC--CCCHHHhCCCc---hhhh----
Confidence 5555567899999999999999999999988 5999999875431 100 00000000000 0000
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCC-C
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDI-R 157 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~-~ 157 (388)
+++ .+++.+++. +.+++|+.++.. .++|.+.++ .++.||+||+||| ++|..|++ +
T Consensus 65 -------~~~-~~~~~~v~~--~~~~~v~~i~~~----~~~v~~~~g--------~~~~~d~lviAtG--~~~~~~~i~~ 120 (408)
T 2gqw_A 65 -------RLD-CKRAPEVEW--LLGVTAQSFDPQ----AHTVALSDG--------RTLPYGTLVLATG--AAPRALPTLQ 120 (408)
T ss_dssp -------BCC-CTTSCSCEE--EETCCEEEEETT----TTEEEETTS--------CEEECSEEEECCC--EEECCCGGGT
T ss_pred -------hHH-HHHHCCCEE--EcCCEEEEEECC----CCEEEECCC--------CEEECCEEEECCC--CCCCCCCccC
Confidence 001 234456555 888889888753 345777664 6899999999999 68888888 8
Q ss_pred CcccccccCCCCcceeeccCCCC-----CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCC
Q 016519 158 GLSSFCSSATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVP 232 (388)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~ 232 (388)
|.+ . .+++.....+ .....+++++|||+|.+|+|+|..|.+.|.+|+++++.+ ..++
T Consensus 121 G~~-~--------~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~---------~~l~ 182 (408)
T 2gqw_A 121 GAT-M--------PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP---------RLMS 182 (408)
T ss_dssp TCS-S--------CEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------SSST
T ss_pred CCC-C--------cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC---------cccc
Confidence 765 2 1232221111 112247899999999999999999999999999999998 3332
Q ss_pred hhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEEeeCCcE
Q 016519 233 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHS 310 (388)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~ 310 (388)
..+- +.+...+.+.+++.+|+++.+ +.+++++.+.+.+|++
T Consensus 183 ~~~~-------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~ 225 (408)
T 2gqw_A 183 RAAP-------------------------------------ATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTR 225 (408)
T ss_dssp TTSC-------------------------------------HHHHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCE
T ss_pred cccC-------------------------------------HHHHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCE
Confidence 1110 111122245566678999887 8888755788889999
Q ss_pred EeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc-------------ccchhhHHHH
Q 016519 311 HHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------YGAAADAQNI 377 (388)
Q Consensus 311 ~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~-------------~~a~~~~~~~ 377 (388)
+++|.||+|+|++||+ .+++.. ++...+| +.+| +.++++.|+|||+|||+... ..|..||+.+
T Consensus 226 i~~D~vi~a~G~~p~~-~l~~~~-gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~a 301 (408)
T 2gqw_A 226 IAADMVVVGIGVLAND-ALARAA-GLACDDG-IFVD-AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAV 301 (408)
T ss_dssp EECSEEEECSCEEECC-HHHHHH-TCCBSSS-EECC-TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHH
T ss_pred EEcCEEEECcCCCccH-HHHHhC-CCCCCCC-EEEC-CCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHH
Confidence 9999999999999998 455444 2332356 8887 56778999999999997642 3689999999
Q ss_pred HHHhhhcc
Q 016519 378 ADHINSIL 385 (388)
Q Consensus 378 a~~i~~~l 385 (388)
|.+|....
T Consensus 302 a~~i~g~~ 309 (408)
T 2gqw_A 302 ARHLVDPT 309 (408)
T ss_dssp HHHHHCTT
T ss_pred HHHhcCCC
Confidence 99998643
No 50
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=5.3e-33 Score=267.05 Aligned_cols=299 Identities=18% Similarity=0.185 Sum_probs=199.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccc-cCCcCceeeecC----CccccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK-KYSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
.+||+||||||+|+++|..|++.|++|+|||+. .+||.|. ..+.+...+... ..+.....+.++.. ....+..
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC-EGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC-CCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC-CCccCHH
Confidence 489999999999999999999999999999976 5677553 232221111000 00001111111111 1123333
Q ss_pred HHHHHHH-----------HHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 82 QFIEYLD-----------HYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 82 ~~~~~l~-----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
.+..+.+ ...+..+++. ..+ ++..++ ...+.|.. ++ .+++||+||+||| +.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~~~----~~~~~v~~-~g--------~~~~~d~lviAtG--~~ 159 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEI--IRG-HAAFTS----DPKPTIEV-SG--------KKYTAPHILIATG--GM 159 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEECS----CSSCEEEE-TT--------EEEECSCEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEe-EEEEee----CCeEEEEE-CC--------EEEEeeEEEEccC--CC
Confidence 4333333 3333445443 333 232222 23355663 22 7899999999999 68
Q ss_pred CCCC---CCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHH
Q 016519 151 PFTP---DIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVL 227 (388)
Q Consensus 151 p~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~ 227 (388)
|..| +++|.+. ..++..+..... .+++++|||+|.+|+|+|..+++.|.+|+++.|++
T Consensus 160 p~~p~~~~i~G~~~----------~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-------- 220 (478)
T 3dk9_A 160 PSTPHESQIPGASL----------GITSDGFFQLEE-LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-------- 220 (478)
T ss_dssp ECCCCTTTSTTGGG----------SBCHHHHTTCCS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS--------
T ss_pred CCCCCcCCCCCCce----------eEchHHhhchhh-cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC--------
Confidence 8888 8887652 234444333333 37899999999999999999999999999999988
Q ss_pred hhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC--e-
Q 016519 228 LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--E- 302 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~- 302 (388)
++++.. ++.+...+.+.+++.+|+++.+ +.+++.+ +
T Consensus 221 -~~l~~~--------------------------------------d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~ 261 (478)
T 3dk9_A 221 -KVLRSF--------------------------------------DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGL 261 (478)
T ss_dssp -SSCTTS--------------------------------------CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSE
T ss_pred -cccccc--------------------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCc
Confidence 333211 1112222345667789999988 8887642 3
Q ss_pred ---EEeeC-------CcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---c
Q 016519 303 ---VIFEN-------GHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---Y 368 (388)
Q Consensus 303 ---v~~~~-------g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~ 368 (388)
+.+.+ |+++++|.||+|+|++||+..+ +.......+++|++.+| +.++++.|||||+|||++.. .
T Consensus 262 ~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~ 340 (478)
T 3dk9_A 262 EVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD-EFQNTNVKGIYAVGDVCGKALLTP 340 (478)
T ss_dssp EEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCC-TTCBCSSTTEEECGGGGCSSCCHH
T ss_pred EEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeC-CCcccCCCCEEEEEecCCCCccHh
Confidence 45554 2678999999999999998655 45553445778999999 56688999999999998653 3
Q ss_pred cchhhHHHHHHHhhhc
Q 016519 369 GAAADAQNIADHINSI 384 (388)
Q Consensus 369 ~a~~~~~~~a~~i~~~ 384 (388)
.|..+|+.+|.+|...
T Consensus 341 ~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 341 VAIAAGRKLAHRLFEY 356 (478)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 8899999999999865
No 51
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=3.7e-33 Score=265.75 Aligned_cols=296 Identities=18% Similarity=0.224 Sum_probs=195.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecCCc----cc-cCCCCCCCCCCCCCCCH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQ----FC-QLPHLPFPSSYPMFVSR 80 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~ 80 (388)
++||+|||||++|+++|..|++.|++|+|||++ .+||.|.. .+.+...+..... +. ....+.+... ....+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT-INKFNW 81 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE-EEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC-CCccCH
Confidence 489999999999999999999999999999997 67886642 1111110000000 00 0000000000 001122
Q ss_pred HHHHHH-----------HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 81 AQFIEY-----------LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 81 ~~~~~~-----------l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
..+..+ ++...++.+++. +.+. ++.++ . . .|.+ ++ .+++||+||+||| +
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~i~--~--~--~v~~-~g--------~~~~~d~lviAtG--s 141 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDV--IKGF-ARFVD--A--K--TLEV-NG--------ETITADHILIATG--G 141 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-CEEEE--T--T--EEEE-TT--------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEec--C--C--EEEE-CC--------EEEEeCEEEECCC--C
Confidence 223222 223334556554 4443 33333 1 2 3555 33 6899999999999 6
Q ss_pred CCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhh
Q 016519 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLR 229 (388)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~ 229 (388)
+|..|+++|.+. .++..++..... .+++++|||+|.+|+|+|..|++.|.+|+++.+++ +
T Consensus 142 ~p~~p~i~g~~~----------~~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~---------~ 201 (450)
T 1ges_A 142 RPSHPDIPGVEY----------GIDSDGFFALPA-LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD---------A 201 (450)
T ss_dssp EECCCCSTTGGG----------SBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------S
T ss_pred CCCCCCCCCccc----------eecHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC---------c
Confidence 888888888742 233333322222 37899999999999999999999999999999988 2
Q ss_pred cCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-----e
Q 016519 230 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----E 302 (388)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~ 302 (388)
.++. + ++.+...+.+.+++.+++++.+ +.+++.+ .
T Consensus 202 ~l~~-~-------------------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~ 243 (450)
T 1ges_A 202 PLPS-F-------------------------------------DPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLT 243 (450)
T ss_dssp SSTT-S-------------------------------------CHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEE
T ss_pred hhhh-h-------------------------------------hHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEE
Confidence 2221 0 0111112245556678888887 7887643 4
Q ss_pred EEeeCCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC---cccchhhHHHHH
Q 016519 303 VIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG---LYGAAADAQNIA 378 (388)
Q Consensus 303 v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~---~~~a~~~~~~~a 378 (388)
+.+.+|+++++|.||+|+|++||++.+ ++......+++|++.+| +.++++.|+|||+|||++. ...|..||+.+|
T Consensus 244 v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa 322 (450)
T 1ges_A 244 LELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVD-KYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLS 322 (450)
T ss_dssp EEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECSGGGTSCCCHHHHHHHHHHHH
T ss_pred EEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeEC-CCCccCCCCEEEEeccCCCCccHHHHHHHHHHHH
Confidence 677889899999999999999998644 34443344678999998 4567999999999999864 337899999999
Q ss_pred HHhhh
Q 016519 379 DHINS 383 (388)
Q Consensus 379 ~~i~~ 383 (388)
.+|..
T Consensus 323 ~~i~~ 327 (450)
T 1ges_A 323 ERLFN 327 (450)
T ss_dssp HHHHT
T ss_pred HHHcC
Confidence 99976
No 52
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=3.2e-33 Score=267.52 Aligned_cols=301 Identities=18% Similarity=0.197 Sum_probs=201.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecC----Cccc-cCCCCCCCCCCCCCCCH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFC-QLPHLPFPSSYPMFVSR 80 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 80 (388)
++||+||||||+|+++|..|++.|++|+|||+. .+||.|.. .+.+...+... ..+. .+.....+.. ...+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~--~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGE--VTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEEC--CEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCC--CccCH
Confidence 379999999999999999999999999999998 67776532 11111100000 0000 0000000000 00111
Q ss_pred H-----------HHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 81 A-----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 81 ~-----------~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
. .+.+.+...+++.+++. +.++.+. + + .+.+.|.+.++.. .+++||+||+||| +
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~--~~g~~~~-i--d--~~~v~V~~~~G~~------~~~~~d~lViAtG--~ 144 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITE--IHGYGTF-A--D--ANTLLVDLNDGGT------ESVTFDNAIIATG--S 144 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECEEEEE-S--S--SSEEEEEETTSCC------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-e--c--CCeEEEEeCCCce------EEEEcCEEEECCC--C
Confidence 1 22333455566667665 6665442 2 2 3567787766422 5799999999999 5
Q ss_pred CCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhh
Q 016519 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLR 229 (388)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~ 229 (388)
+|..|+++|.+. .+++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+++ +
T Consensus 145 ~~~~~~~~g~~~---------~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~---------~ 205 (464)
T 2a8x_A 145 STRLVPGTSLSA---------NVVTYEEQILSRE-LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP---------R 205 (464)
T ss_dssp EECCCTTCCCBT---------TEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------S
T ss_pred CCCCCCCCCCCc---------eEEecHHHhhccc-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC---------c
Confidence 788888777542 1455544433333 37899999999999999999999999999999998 3
Q ss_pred cCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe----E
Q 016519 230 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE----V 303 (388)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~----v 303 (388)
++|. +. +.+...+.+.+++.+|+++.+ +.+++.+. +
T Consensus 206 ~l~~-~~-------------------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v 247 (464)
T 2a8x_A 206 ALPN-ED-------------------------------------ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTV 247 (464)
T ss_dssp SSTT-SC-------------------------------------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEE
T ss_pred cccc-cC-------------------------------------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEE
Confidence 3331 10 111112245566678888887 88887532 3
Q ss_pred Eee-CC--cEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---ccchhhHHH
Q 016519 304 IFE-NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YGAAADAQN 376 (388)
Q Consensus 304 ~~~-~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~a~~~~~~ 376 (388)
.+. +| +++++|.||+|+|++||+..+ ++......+++|++.+| +.++++.|+|||+|||+... ..|..||+.
T Consensus 248 ~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~ 326 (464)
T 2a8x_A 248 TVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVD-DYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVV 326 (464)
T ss_dssp EEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCC-TTSBCSSTTEEECGGGGCSSCSHHHHHHHHHH
T ss_pred EEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEeECcCCCccCHHHHHHHHHH
Confidence 444 66 678999999999999998543 34442334667999999 45678999999999998753 378999999
Q ss_pred HHHHhhh
Q 016519 377 IADHINS 383 (388)
Q Consensus 377 ~a~~i~~ 383 (388)
+|.+|..
T Consensus 327 aa~~i~g 333 (464)
T 2a8x_A 327 AAETIAG 333 (464)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9999986
No 53
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1e-32 Score=263.55 Aligned_cols=296 Identities=18% Similarity=0.252 Sum_probs=197.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecCC----ccccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (388)
++||+|||||++|+++|..|++.|++|+|||+. .+||.|.. .+.+...+.... .+.....+.+... ....+..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS-GGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC----CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC-CCCcCHH
Confidence 589999999999999999999999999999997 67887652 222211000000 0000000011000 0112333
Q ss_pred HHHHHH-----------HHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 82 QFIEYL-----------DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 82 ~~~~~l-----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
.+..+. ...+++.+++. +.+. +..++ . +.|.+ ++ .+++||+||+||| ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~i~--~----~~v~~-~g--------~~~~~d~lviAtG--s~ 141 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITR--VDGH-ARFVD--A----HTIEV-EG--------QRLSADHIVIATG--GR 141 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-EEEEE--T----TEEEE-TT--------EEEEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEE--EEeE-EEEcc--C----CEEEE-CC--------EEEEcCEEEECCC--CC
Confidence 333322 23334456554 4443 33332 1 23555 33 6899999999999 68
Q ss_pred CCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhc
Q 016519 151 PFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRY 230 (388)
Q Consensus 151 p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~ 230 (388)
|..|+++|.+. .++..++..... .+++++|||+|.+|+|+|..|.+.|.+|+++++++ +.
T Consensus 142 p~~p~i~G~~~----------~~~~~~~~~~~~-~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~---------~~ 201 (463)
T 2r9z_A 142 PIVPRLPGAEL----------GITSDGFFALQQ-QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED---------RL 201 (463)
T ss_dssp ECCCSCTTGGG----------SBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------SS
T ss_pred CCCCCCCCccc----------eecHHHHhhhhc-cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC---------cc
Confidence 88888888742 233333222222 37899999999999999999999999999999988 22
Q ss_pred CChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC----eEE
Q 016519 231 VPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVI 304 (388)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~ 304 (388)
++. + ++.....+.+.+++.+|+++.+ +.+++.+ .+.
T Consensus 202 l~~-~-------------------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~ 243 (463)
T 2r9z_A 202 LFQ-F-------------------------------------DPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLV 243 (463)
T ss_dssp STT-S-------------------------------------CHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEE
T ss_pred ccc-c-------------------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEE
Confidence 221 0 0111122245566778999888 8888642 467
Q ss_pred eeCCc-EEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---ccchhhHHHHHH
Q 016519 305 FENGH-SHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YGAAADAQNIAD 379 (388)
Q Consensus 305 ~~~g~-~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~a~~~~~~~a~ 379 (388)
+.+|+ ++++|.||+|+|++||++.+ ++......+++|++.+| +.++++.|+|||+|||+... ..|..+|+.+|.
T Consensus 244 ~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~ 322 (463)
T 2r9z_A 244 AQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTD-AYQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAE 322 (463)
T ss_dssp ETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHH
T ss_pred EeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-CCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHH
Confidence 78898 89999999999999998544 34442344678999998 45678999999999998753 378999999999
Q ss_pred Hhhh
Q 016519 380 HINS 383 (388)
Q Consensus 380 ~i~~ 383 (388)
+|..
T Consensus 323 ~i~g 326 (463)
T 2r9z_A 323 RLFD 326 (463)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 9975
No 54
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.3e-33 Score=269.95 Aligned_cols=302 Identities=15% Similarity=0.175 Sum_probs=197.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccc-ccCCcCceeeecCC----ccccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW-KKYSYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (388)
++||+||||||+|+++|..|++.|++|+|||+++ +||.| +..+.+...+.... ....++.+.++.. ....+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHH
Confidence 4899999999999999999999999999999976 67654 23333322111000 0000111111100 0113445
Q ss_pred HHHHHHHHHHHhcCCc----------ceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 016519 82 QFIEYLDHYVSHFNIV----------PSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (388)
Q Consensus 82 ~~~~~l~~~~~~~~~~----------~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p 151 (388)
++.++++...+++... .. .+.....-. +.++|.+.++ .+++||+||+||| ++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~g~a~~~------~~~~v~~~~~--------~~~~~d~lViATG--s~p 148 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQD-KIRGFAKFL------DEHTLQVDDH--------SQVIAKRIVIATG--SRP 148 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGG-EEESCEEEE------ETTEEEETTT--------EEEEEEEEEECCC--EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCee-EEEEEEEEe------cCCEEEEcCC--------cEEEeCEEEEccC--CCC
Confidence 5555554443332110 00 111111111 2234666543 7899999999999 788
Q ss_pred CCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcC
Q 016519 152 FTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYV 231 (388)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~ 231 (388)
..|++++... ..+++..+...... .+++++|||+|.+|+|+|..+++.|.+|+++.|++ +++
T Consensus 149 ~~p~~~~~~~--------~~v~t~~~~~~~~~-~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~---------~~l 210 (492)
T 3ic9_A 149 NYPEFLAAAG--------SRLLTNDNLFELND-LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG---------SVA 210 (492)
T ss_dssp CCCHHHHTTG--------GGEECHHHHTTCSS-CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT---------CCT
T ss_pred cCCCCCCccC--------CcEEcHHHHhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC---------ccc
Confidence 8887544321 23555555444333 38999999999999999999999999999999998 222
Q ss_pred ChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC--e--EEe
Q 016519 232 PCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--E--VIF 305 (388)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~--v~~ 305 (388)
+.. ++.+...+.+.+++. |+++.+ +.+++.+ . +.+
T Consensus 211 ~~~--------------------------------------d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~ 251 (492)
T 3ic9_A 211 NLQ--------------------------------------DEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIY 251 (492)
T ss_dssp TCC--------------------------------------CHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEE
T ss_pred ccC--------------------------------------CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEE
Confidence 210 111112224555556 888877 7777643 2 444
Q ss_pred e--CC--cEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCcc---cchhhHHHH
Q 016519 306 E--NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAAADAQNI 377 (388)
Q Consensus 306 ~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~~---~a~~~~~~~ 377 (388)
. +| +++++|.||+|+|++||+..+ ++......+++|++.+|.+.++++.|+|||+|||+.... .|..+|+.+
T Consensus 252 ~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~a 331 (492)
T 3ic9_A 252 FDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVA 331 (492)
T ss_dssp ECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHH
T ss_pred EeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHH
Confidence 4 67 678999999999999998554 444434457789999886677889999999999987633 889999999
Q ss_pred HHHhhhc
Q 016519 378 ADHINSI 384 (388)
Q Consensus 378 a~~i~~~ 384 (388)
|.+|...
T Consensus 332 a~~i~~~ 338 (492)
T 3ic9_A 332 GTNAGAY 338 (492)
T ss_dssp HHHHHHT
T ss_pred HHHHcCC
Confidence 9999873
No 55
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=6.7e-32 Score=259.43 Aligned_cols=307 Identities=13% Similarity=0.102 Sum_probs=202.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecC----CccccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
++||+|||||++|+++|..|++.|++|+|||+.+.+||.|.. .+.+...+... ..+..+.....+.. ....+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~-~~~~~~~ 84 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP-EPELDID 84 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC-CCccCHH
Confidence 489999999999999999999999999999998888886542 11111100000 00000000000000 0012222
Q ss_pred HHHH-----------HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccC------CCCceeeEEEeeCEEEEe
Q 016519 82 QFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLL------SPGRVIEEYYSGRFLVVA 144 (388)
Q Consensus 82 ~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~~~~d~li~A 144 (388)
.+.. .+...+++.+++. +.++.+. .+. +.+.|.+.++. ..|+. .+++||+||+|
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~---~~~--~~v~v~~~~g~~~~~~~~~g~~--~~i~ad~lViA 155 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDV--IQGDGQF---LDP--HHLEVSLTAGDAYEQAAPTGEK--KIVAFKNCIIA 155 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EEEEEEE---EET--TEEEEEEEEEEETTEEEEEEEE--EEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EeeEEEE---ccC--CEEEEEecCCcccccccccCcc--eEEEcCEEEEC
Confidence 2222 2344555667665 6665443 222 55666654420 00111 47899999999
Q ss_pred ecCCCCCCCCC-CCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhh
Q 016519 145 SGETSNPFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYL 223 (388)
Q Consensus 145 tG~~s~p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~ 223 (388)
|| ++|..|+ ++ .+ ..+++..+...... .+++++|||+|.+|+|+|..|++.|.+|+++++++
T Consensus 156 tG--s~p~~~~~i~-~~---------~~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~---- 218 (482)
T 1ojt_A 156 AG--SRVTKLPFIP-ED---------PRIIDSSGALALKE-VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD---- 218 (482)
T ss_dssp CC--EEECCCSSCC-CC---------TTEECHHHHTTCCC-CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS----
T ss_pred CC--CCCCCCCCCC-cc---------CcEEcHHHHhcccc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC----
Confidence 99 5677776 44 22 12455554444333 37899999999999999999999999999999998
Q ss_pred hHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC
Q 016519 224 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN 301 (388)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~ 301 (388)
+++|.. ++.+...+.+.+++.+|+++.+ +.+++.+
T Consensus 219 -----~~l~~~--------------------------------------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~ 255 (482)
T 1ojt_A 219 -----GLMQGA--------------------------------------DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPK 255 (482)
T ss_dssp -----SSSTTS--------------------------------------CHHHHHHHHHHHGGGEEEEECSCEEEEEEEE
T ss_pred -----cccccc--------------------------------------CHHHHHHHHHHHHhcCCEEEECCEEEEEEEc
Confidence 333310 1112222346677789999988 8888643
Q ss_pred ----eEEeeC----CcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---cc
Q 016519 302 ----EVIFEN----GHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YG 369 (388)
Q Consensus 302 ----~v~~~~----g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~ 369 (388)
.+.+.+ |+++++|.||+|+|++||++.+ ++......+++|++.+| +.++++.|+|||+|||+... ..
T Consensus 256 ~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~l~~~ 334 (482)
T 1ojt_A 256 EDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVD-KQMRTNVPHIYAIGDIVGQPMLAHK 334 (482)
T ss_dssp TTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCC-TTSBCSSTTEEECGGGTCSSCCHHH
T ss_pred CCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeC-CCcccCCCCEEEEEcccCCCccHHH
Confidence 366676 7789999999999999998544 45553344667999998 46788999999999998753 37
Q ss_pred chhhHHHHHHHhhhc
Q 016519 370 AAADAQNIADHINSI 384 (388)
Q Consensus 370 a~~~~~~~a~~i~~~ 384 (388)
|..||+.+|.+|...
T Consensus 335 A~~~g~~aa~~i~g~ 349 (482)
T 1ojt_A 335 AVHEGHVAAENCAGH 349 (482)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999863
No 56
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.5e-33 Score=264.80 Aligned_cols=297 Identities=16% Similarity=0.145 Sum_probs=200.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeec----CCccccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
++||+||||||+|+++|..|++.|++|+|||+ +.+||.|.. .+.+...+.. +..+..++.+.+....+ ..+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES-RFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC-EECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-CcCHH
Confidence 58999999999999999999999999999999 668886542 2221111000 00000011111000000 01222
Q ss_pred -----------HHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc-ccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 82 -----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 82 -----------~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
.+..++....+..+++. ..+ ++..++ ...+.+. ++ .++.+|+||+||| +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~------~~~v~~~~~~--------~~~~~d~lviAtG--~ 143 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEI--LDT-RAELAG------PNTVKLLASG--------KTVTAERIVIAVG--G 143 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEE--EES-CEEESS------SSEEEETTTT--------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEE-EEEEee------CCEEEEecCC--------eEEEeCEEEEecC--C
Confidence 22333444455556654 333 343332 1235552 32 7899999999999 6
Q ss_pred CCC-CCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHh
Q 016519 150 NPF-TPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLL 228 (388)
Q Consensus 150 ~p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~ 228 (388)
+|. .|.++|.+.. ++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+
T Consensus 144 ~p~~~p~i~G~~~~----------~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~--------- 203 (463)
T 4dna_A 144 HPSPHDALPGHELC----------ITSNEAFDLPA-LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK--------- 203 (463)
T ss_dssp EECCCTTSTTGGGC----------BCHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------
T ss_pred CcccCCCCCCcccc----------ccHHHHhhhhc-CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC---------
Confidence 888 8888887532 33333333333 38899999999999999999999999999999988
Q ss_pred hcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-----
Q 016519 229 RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----- 301 (388)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----- 301 (388)
++++.. ++.+...+.+.+++.+++++.+ |.+++.+
T Consensus 204 ~~l~~~--------------------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~ 245 (463)
T 4dna_A 204 EILSRF--------------------------------------DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRR 245 (463)
T ss_dssp SSSTTS--------------------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCE
T ss_pred cccccc--------------------------------------CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEE
Confidence 222210 1112222346677789999987 8888753
Q ss_pred eEE-eeCCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCcc---cchhhHHH
Q 016519 302 EVI-FENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAAADAQN 376 (388)
Q Consensus 302 ~v~-~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~~---~a~~~~~~ 376 (388)
.+. +.+|+ +++|.||+|+|++|++..+ +.......+++|++.+| +.++++.|+|||+|||++... .|..+|+.
T Consensus 246 ~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~ 323 (463)
T 4dna_A 246 VATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVD-AFSRTSTPGIYALGDVTDRVQLTPVAIHEAMC 323 (463)
T ss_dssp EEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSGGGSSCCCHHHHHHHHHH
T ss_pred EEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeEC-cCCCCCCCCEEEEEecCCCCCChHHHHHHHHH
Confidence 466 77887 9999999999999998554 45553445778999999 556699999999999988543 79999999
Q ss_pred HHHHhhhc
Q 016519 377 IADHINSI 384 (388)
Q Consensus 377 ~a~~i~~~ 384 (388)
+|.+|...
T Consensus 324 aa~~i~g~ 331 (463)
T 4dna_A 324 FIETEYKN 331 (463)
T ss_dssp HHHHHHSS
T ss_pred HHHHHcCC
Confidence 99999864
No 57
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=1.3e-31 Score=257.78 Aligned_cols=337 Identities=18% Similarity=0.260 Sum_probs=203.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcC--------------CCEEEEeecCCCCcccccCC-cCceeeecC--CccccCCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQS--------------IPYVILERENCYASIWKKYS-YDRLRLHLA--KQFCQLPHL 68 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g--------------~~v~lie~~~~~gg~~~~~~-~~~~~~~~~--~~~~~~~~~ 68 (388)
..+||+|||+||+||++|..|.+.+ ...+.+|+.+.++ |+..+ ++...+..+ +++..+.+-
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCC
Confidence 3489999999999999999998753 3677888888776 76543 555544433 333222111
Q ss_pred --C---------------CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCC------CcEEEEEccc
Q 016519 69 --P---------------FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEAT------NMWNVKASNL 125 (388)
Q Consensus 69 --~---------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~~v~~~~~ 125 (388)
+ ++.....|+++.++.+|+++++++++..+ +++++|+++.+.+.+ +.|+|++.++
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~v--rf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~ 193 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVV--AYGEEVVEVIPGKSDPSSSVVDFFTVRSRNV 193 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGE--EESEEEEEEEEECSSTTSSCBCEEEEEEEET
T ss_pred CCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCce--EcceEEEeeccccccccccccceEEEEEecC
Confidence 1 11223457899999999999999987655 999999999886532 3599999887
Q ss_pred CCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCC------CCCCCCCeEEEECCCCCHH
Q 016519 126 LSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKN------GKPYGGKNVLVVGSGNSGM 199 (388)
Q Consensus 126 ~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~a~ 199 (388)
.+ |+. .++.+++||+||| ..|.+|... .+ .+.++|+.++.+ ...+++|+|+|||+|.||+
T Consensus 194 ~~-g~~--~~~~ar~vVlatG--~~P~iP~~~---~~------~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ 259 (501)
T 4b63_A 194 ET-GEI--SARRTRKVVIAIG--GTAKMPSGL---PQ------DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAA 259 (501)
T ss_dssp TT-CCE--EEEEEEEEEECCC--CEECCCTTS---CC------CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHH
T ss_pred CC-ceE--EEEEeCEEEECcC--CCCCCCCCC---CC------CcceeeccccccchhhccccccCCcEEEEECCcHHHH
Confidence 54 333 7899999999999 577766543 34 567999998764 4557799999999999999
Q ss_pred HHHHHHHhh--cCeeEEEEecchh---hhhHHHhhcCChhhHHHH-----------HHHHHHHHhcCcc-----------
Q 016519 200 EIALDLANH--AAKTSLVIRSPMV---YLGLVLLRYVPCGGVDTL-----------MVMLSRLVYGDLS----------- 252 (388)
Q Consensus 200 e~a~~l~~~--~~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~----------- 252 (388)
|++..|++. +.+|+++.|++.+ ...+.....+.....+.| .........+...
T Consensus 260 ei~~~L~~~~~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~ 339 (501)
T 4b63_A 260 EIFHDLQKRYPNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDM 339 (501)
T ss_dssp HHHHHHHHHSTTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHH
Confidence 999999886 6789999999844 111111111211222221 1111000000000
Q ss_pred -ccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecCceEEEcCeEEeeCCcEEeccEEEEccCCCCCCccccc
Q 016519 253 -KYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGIESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNVWLK 331 (388)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~ 331 (388)
+..+..+...+ +...+.+..... ..........+++...+.+++.+++.+.+|+++++|+||+||||+++.+.++.
T Consensus 340 y~~~~~~~~~~~-~~~~l~~~~~v~--~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~ 416 (501)
T 4b63_A 340 YLQRVKNPDETQ-WQHRILPERKIT--RVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLL 416 (501)
T ss_dssp HHHHHHCSCGGG-CSSEEECSEEEE--EEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHT
T ss_pred HhhccCCCcccc-cceeecCCccee--eeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhc
Confidence 00000000000 000011101000 01111223445555446667778899999999999999999999998865543
Q ss_pred CCCCc--cCCCCCcCCCCCCCc-------cCCCceEEEecc
Q 016519 332 GDDSM--LNDDGIPKQSYPNHW-------KGKNGLYCVGLS 363 (388)
Q Consensus 332 ~~~~~--~~~~g~~~~~~~~~~-------~~~~~vy~~Gd~ 363 (388)
..... .+..|.+.++.++.. ...++||+.|-+
T Consensus 417 ~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 417 SKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp GGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred chhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 33222 245677776644322 235779999855
No 58
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1e-33 Score=277.90 Aligned_cols=290 Identities=16% Similarity=0.191 Sum_probs=204.6
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
+||+|||||++|+++|..|++. +++|+|||+.+..+. .... .+.. ... ........+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~-------~~~~--l~~~---~~~-------~~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF-------ANCG--LPYH---ISG-------EIAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB-------CGGG--HHHH---HTS-------SSCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc-------cccC--chHH---hcC-------CcCChHHhhcc
Confidence 5899999999999999999998 789999999986651 1000 0000 000 00012233445
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
+.+++.+++++++ +++++|++++... ..+.+..... ++. .++.||+||+||| ++|..|+++|.+..
T Consensus 63 ~~~~~~~~~~i~~--~~~~~V~~id~~~--~~v~~~~~~~---g~~--~~~~~d~lviAtG--~~p~~p~ipG~~~~--- 128 (565)
T 3ntd_A 63 TPESFKARFNVEV--RVKHEVVAIDRAA--KLVTVRRLLD---GSE--YQESYDTLLLSPG--AAPIVPPIPGVDNP--- 128 (565)
T ss_dssp CHHHHHHHHCCEE--ETTEEEEEEETTT--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCCTTCCST---
T ss_pred CHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEEecCC---CCe--EEEECCEEEECCC--CCCCCCCCCCCCCC---
Confidence 5666677778776 8899999998754 5555554221 111 5899999999999 68999999987643
Q ss_pred CCCCcceeeccCCCCC-------CCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHH
Q 016519 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDT 238 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 238 (388)
.+++.....+. ....+++++|||+|.+|+|+|..+++.|.+|++++|++ +++|. +.
T Consensus 129 -----~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~---------~~l~~-~~-- 191 (565)
T 3ntd_A 129 -----LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD---------QVMTP-VD-- 191 (565)
T ss_dssp -----TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------SSCTT-SC--
T ss_pred -----CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC---------ccchh-cC--
Confidence 23333322111 11247899999999999999999999999999999998 33331 11
Q ss_pred HHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc----------------
Q 016519 239 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG---------------- 300 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~---------------- 300 (388)
+.+...+.+.+++.+|+++.+ +.+++.
T Consensus 192 -----------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~ 236 (565)
T 3ntd_A 192 -----------------------------------REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTA 236 (565)
T ss_dssp -----------------------------------HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCT
T ss_pred -----------------------------------HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccc
Confidence 111112234566678888876 777754
Q ss_pred ----C---eEEeeCCcEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEecccc-------C
Q 016519 301 ----N---EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK-------G 366 (388)
Q Consensus 301 ----~---~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~-------~ 366 (388)
+ .+.+.+|+++++|.||+|+|++|++. +........+++|++.+| +.++++.|+|||+|||+. .
T Consensus 237 ~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~-l~~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~ 314 (565)
T 3ntd_A 237 HQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQ-LARDAGLAIGELGGIKVN-AMMQTSDPAIYAVGDAVEEQDFVTGQ 314 (565)
T ss_dssp TCCTTCEEEEEETTSCEEEESEEEECSCEEECCH-HHHHHTCCBCTTSSBCCC-TTCBCSSTTEEECGGGBCEEBTTTCC
T ss_pred cccCCCcEEEEEcCCCEEEcCEEEECcCCccchH-HHHhCCcccCCCCCEEEC-CCcccCCCCEEEeeeeEeeccccCCc
Confidence 1 35667889999999999999999984 555543445778999998 567789999999999973 1
Q ss_pred ------cccchhhHHHHHHHhhhc
Q 016519 367 ------LYGAAADAQNIADHINSI 384 (388)
Q Consensus 367 ------~~~a~~~~~~~a~~i~~~ 384 (388)
...|..||+.+|++|...
T Consensus 315 ~~~~~~~~~A~~~g~~aa~~i~g~ 338 (565)
T 3ntd_A 315 ACLVPLAGPANRQGRMAADNMFGR 338 (565)
T ss_dssp EECCCCHHHHHHHHHHHHHHHTTC
T ss_pred eeecccHHHHHHHHHHHHHHhcCC
Confidence 226899999999999864
No 59
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.5e-33 Score=269.28 Aligned_cols=298 Identities=18% Similarity=0.235 Sum_probs=192.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeec----CCccccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
++||+||||||+|+++|..|++.|++|+|||+.. .||.|.. .+.+...+.. ...+.....+.+... ...+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK--FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC--CccCHH
Confidence 4899999999999999999999999999999984 7887653 2222110000 000000000111100 011222
Q ss_pred HH-----------HHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc---------ccCCCCceeeEEEeeCEE
Q 016519 82 QF-----------IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS---------NLLSPGRVIEEYYSGRFL 141 (388)
Q Consensus 82 ~~-----------~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~---------~~~~~~~~~~~~~~~d~l 141 (388)
.+ ...+...+++.+++. +.+. +..++ ...+.+... ++.. .+++||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~id----~~~v~v~~~~~~~~~~~~~~~~------~~~~~d~l 145 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDL--YEGT-ASFLS----ENRILIKGTKDNNNKDNGPLNE------EILEGRNI 145 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-CCCC------------------------------------CBSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEee----CCEEEEEeccccccccccCCCc------eEEEeCEE
Confidence 22 222334445556654 4443 22222 123333220 0101 57999999
Q ss_pred EEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchh
Q 016519 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMV 221 (388)
Q Consensus 142 i~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~ 221 (388)
|+||| ++|..|+++|.+. .++..++..... +++++|||+|.+|+|+|..|++.|.+|+++++++
T Consensus 146 ViAtG--s~p~~p~i~G~~~----------~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-- 209 (500)
T 1onf_A 146 LIAVG--NKPVFPPVKGIEN----------TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-- 209 (500)
T ss_dssp EECCC--CCBCCCSCTTGGG----------CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS--
T ss_pred EECCC--CCCCCCCCCCCCc----------ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC--
Confidence 99999 6898898888742 355554444333 7899999999999999999999999999999988
Q ss_pred hhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEE
Q 016519 222 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 299 (388)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~ 299 (388)
+.++.. ++.+...+.+.+++.+|+++.+ +.+++
T Consensus 210 -------~~l~~~--------------------------------------d~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 244 (500)
T 1onf_A 210 -------RILRKF--------------------------------------DESVINVLENDMKKNNINIVTFADVVEIK 244 (500)
T ss_dssp -------SSCTTS--------------------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred -------ccCccc--------------------------------------chhhHHHHHHHHHhCCCEEEECCEEEEEE
Confidence 333210 1111222346677789999988 88886
Q ss_pred cC-----eEEeeCCcE-EeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccc--------
Q 016519 300 GN-----EVIFENGHS-HHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSR-------- 364 (388)
Q Consensus 300 ~~-----~v~~~~g~~-~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~-------- 364 (388)
.+ .+.+.+|++ +++|.||+|+|++||++.+ +....... ++|++.+| +.++++.|+|||+|||+
T Consensus 245 ~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~ 322 (500)
T 1onf_A 245 KVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVD-ENQRTSVNNIYAVGDCCMVKKSKEI 322 (500)
T ss_dssp ESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEEC-TTCBCSSSSEEECSTTEEEC-----
T ss_pred EcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEEC-CCcccCCCCEEEEeccccccccccc
Confidence 42 367778888 9999999999999998555 45552333 68999998 45678999999999998
Q ss_pred --------------------------cC---cccchhhHHHHHHHhhh
Q 016519 365 --------------------------KG---LYGAAADAQNIADHINS 383 (388)
Q Consensus 365 --------------------------~~---~~~a~~~~~~~a~~i~~ 383 (388)
.. ...|..||+.+|.+|..
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 323 EDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp -------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 22 22789999999999975
No 60
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=3.3e-33 Score=268.55 Aligned_cols=306 Identities=13% Similarity=0.102 Sum_probs=201.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC-CcCceeeecC----Cccc-cCCCCCCCCCCCCCCCH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFC-QLPHLPFPSSYPMFVSR 80 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 80 (388)
++||+||||||+|+++|..|++.|++|+|||+.+.+||.|... +.+...+... ..+. .+.....+.......+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4899999999999999999999999999999988888876531 1111000000 0000 00000000000001122
Q ss_pred HHHHH-----------HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEE------EeeCEEEE
Q 016519 81 AQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY------YSGRFLVV 143 (388)
Q Consensus 81 ~~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~d~li~ 143 (388)
..+.. .+...+++.+++. +.++.+.. +.+.+.|.+.++.. .+ ++||+||+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~-----~~~~v~V~~~~G~~------~~~~~~~~i~~d~lVi 151 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTY--YKGNGSFE-----DETKIRVTPVDGLE------GTVKEDHILDVKNIIV 151 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEEES-----SSSEEEEECCTTCT------TCCSSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEc-----cCCeEEEEecCCCc------ccccccceEEeCEEEE
Confidence 22222 2344455567665 67765531 23567777665421 34 99999999
Q ss_pred eecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhh
Q 016519 144 ASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYL 223 (388)
Q Consensus 144 AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~ 223 (388)
|||+ +|. .++|.+.. ...++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.|++
T Consensus 152 AtGs--~p~--~~~g~~~~------~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~---- 216 (478)
T 1v59_A 152 ATGS--EVT--PFPGIEID------EEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP---- 216 (478)
T ss_dssp CCCE--EEC--CCTTCCCC------SSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS----
T ss_pred CcCC--CCC--CCCCCCCC------CceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC----
Confidence 9994 553 34444321 113555555444433 37899999999999999999999999999999998
Q ss_pred hHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc-
Q 016519 224 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG- 300 (388)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~- 300 (388)
+++|. + ++.+...+.+.+++.+|+++.+ +.+++.
T Consensus 217 -----~~l~~-~-------------------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~ 253 (478)
T 1v59_A 217 -----QIGAS-M-------------------------------------DGEVAKATQKFLKKQGLDFKLSTKVISAKRN 253 (478)
T ss_dssp -----SSSSS-S-------------------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEEE
T ss_pred -----ccccc-c-------------------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEe
Confidence 33331 1 1111222245566778999988 888865
Q ss_pred -C----eEEee-----CCcEEeccEEEEccCCCCCCcc-cccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc--
Q 016519 301 -N----EVIFE-----NGHSHHFDSIVFCTGFKRSTNV-WLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-- 367 (388)
Q Consensus 301 -~----~v~~~-----~g~~~~~D~vi~atG~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~-- 367 (388)
+ .+.+. +++++++|.||+|+|++||+.. +++......+++|++.+| +.++++.|+|||+|||+...
T Consensus 254 ~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~ 332 (478)
T 1v59_A 254 DDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVID-DQFNSKFPHIKVVGDVTFGPML 332 (478)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCC-TTSBCSSTTEEECGGGSSSCCC
T ss_pred cCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeEC-cCCccCCCCEEEeeccCCCccc
Confidence 2 24555 4568999999999999999854 445553344668999998 55778999999999998753
Q ss_pred -ccchhhHHHHHHHhhhc
Q 016519 368 -YGAAADAQNIADHINSI 384 (388)
Q Consensus 368 -~~a~~~~~~~a~~i~~~ 384 (388)
..|..||+.+|.+|...
T Consensus 333 ~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 333 AHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 38999999999999864
No 61
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=7.6e-33 Score=265.16 Aligned_cols=302 Identities=18% Similarity=0.173 Sum_probs=199.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecC-Cc---cccCCCC-CCCCCCCCCCCH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA-KQ---FCQLPHL-PFPSSYPMFVSR 80 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~-~~---~~~~~~~-~~~~~~~~~~~~ 80 (388)
++||+|||||++|+++|..|++.|++|+|||++ .+||.|.. .+++...+... .. ....+.. ..+.. ....+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT-VPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC-CCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC-CCccCH
Confidence 589999999999999999999999999999998 67887753 22111100000 00 0001111 01100 011122
Q ss_pred HHHH-------HHHH-----HHHHhc-CCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 016519 81 AQFI-------EYLD-----HYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (388)
Q Consensus 81 ~~~~-------~~l~-----~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~ 147 (388)
..+. .+++ ..+++. +++. +.+ ++..++ ...+.|.+.++.. .+++||+||+|||
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~g-~~~~~~----~~~~~v~~~~g~~------~~~~~d~lviAtG- 147 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITV--VHG-EARFKD----DQSLTVRLNEGGE------RVVMFDRCLVATG- 147 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEE--EEE-EEEEEE----TTEEEEEETTSSE------EEEECSEEEECCC-
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEE--EEE-EEEEcc----CCEEEEEeCCCce------EEEEeCEEEEeCC-
Confidence 2222 2222 223333 4443 333 354443 2567777765422 5799999999999
Q ss_pred CCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHH
Q 016519 148 TSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVL 227 (388)
Q Consensus 148 ~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~ 227 (388)
++|..|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++++++
T Consensus 148 -s~p~~p~i~G~~~~--------~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-------- 209 (467)
T 1zk7_A 148 -ASPAVPPIPGLKES--------PYWTSTEALASDT-IPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-------- 209 (467)
T ss_dssp -EEECCCCCTTTTTS--------CCBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC--------
T ss_pred -CCCCCCCCCCCCcC--------ceecHHHHhcccc-cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC--------
Confidence 68999999887643 2344443333322 37899999999999999999999999999999988
Q ss_pred hhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC--e-
Q 016519 228 LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--E- 302 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~- 302 (388)
.++| +- +.+...+.+.+++.+++++.+ |.+++.+ .
T Consensus 210 -~~l~--~~-------------------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~ 249 (467)
T 1zk7_A 210 -LFFR--ED-------------------------------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEF 249 (467)
T ss_dssp -TTTT--SC-------------------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEE
T ss_pred -ccCC--CC-------------------------------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEE
Confidence 3333 11 111122245566678999887 7777643 2
Q ss_pred -EEeeCCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---ccchhhHHHH
Q 016519 303 -VIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YGAAADAQNI 377 (388)
Q Consensus 303 -v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~a~~~~~~~ 377 (388)
+.+ ++.++++|.||+|+|+.||+..+ +.......+++|++.+| +.++++.|+||++|||+... ..|..||+.+
T Consensus 250 ~v~~-~~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~a 327 (467)
T 1zk7_A 250 VLTT-THGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVID-QGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRA 327 (467)
T ss_dssp EEEE-TTEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSTTBSSCCCHHHHHHHHHHH
T ss_pred EEEE-CCcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHH
Confidence 344 45689999999999999998544 33442334668999998 55778999999999998753 3789999999
Q ss_pred HHHhhhc
Q 016519 378 ADHINSI 384 (388)
Q Consensus 378 a~~i~~~ 384 (388)
|.+|...
T Consensus 328 a~~i~~~ 334 (467)
T 1zk7_A 328 AINMTGG 334 (467)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9999763
No 62
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=6.3e-33 Score=261.16 Aligned_cols=282 Identities=19% Similarity=0.182 Sum_probs=198.6
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCC--EEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
++|+|||||++|+++|..|+++|++ |+|||+++..+. .+.. .+..+... ...+... +
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y-------~~~~--l~~~~~~g--~~~~~~~--~-------- 61 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY-------DRPS--LSKAVLDG--SLERPPI--L-------- 61 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB-------CSGG--GGTHHHHT--SSSSCCB--S--------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc-------CCcc--ccHHHhCC--CCCHHHh--c--------
Confidence 5999999999999999999999987 999999886542 1100 00000000 0000011 0
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
+...++++.+++. +.+++|+.++... ..|.+.++ .++.||+||+||| +.|..|+++|.+..
T Consensus 62 ~~~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g--------~~~~~d~lvlAtG--~~p~~~~ipG~~~~--- 122 (410)
T 3ef6_A 62 AEADWYGEARIDM--LTGPEVTALDVQT----RTISLDDG--------TTLSADAIVIATG--SRARTMALPGSQLP--- 122 (410)
T ss_dssp SCTTHHHHTTCEE--EESCCEEEEETTT----TEEEETTS--------CEEECSEEEECCC--EEECCCCCTTTTST---
T ss_pred CCHHHHHHCCCEE--EeCCEEEEEECCC----CEEEECCC--------CEEECCEEEEccC--CcccCCCCCCcccc---
Confidence 1112344567766 8898999998643 35777765 6899999999999 68998988886532
Q ss_pred CCCCcceeeccCCCC-----CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHH
Q 016519 166 ATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLM 240 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
.+++.....+ .....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .+++..+-..
T Consensus 123 -----~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~---------~~l~~~~~~~-- 186 (410)
T 3ef6_A 123 -----GVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD---------ELLVRVLGRR-- 186 (410)
T ss_dssp -----TEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------SSSHHHHCHH--
T ss_pred -----ceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC---------ccchhhcCHH--
Confidence 2333322211 112247899999999999999999999999999999998 3332211111
Q ss_pred HHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC----eEEeeCCcEEecc
Q 016519 241 VMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVIFENGHSHHFD 314 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~~g~~~~~D 314 (388)
+...+.+.+++.+|+++.+ |.+++.+ .+.+.||+++++|
T Consensus 187 -----------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD 231 (410)
T 3ef6_A 187 -----------------------------------IGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVAD 231 (410)
T ss_dssp -----------------------------------HHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECS
T ss_pred -----------------------------------HHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcC
Confidence 1122245566678999877 8888765 5888999999999
Q ss_pred EEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC------------cccchhhHHHHHHHhh
Q 016519 315 SIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------------LYGAAADAQNIADHIN 382 (388)
Q Consensus 315 ~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~------------~~~a~~~~~~~a~~i~ 382 (388)
.||+|+|++|++ .++... ++...+| +.+| ..++++.|+||++|||+.. +..|..||+.+|.+|.
T Consensus 232 ~Vv~a~G~~p~~-~l~~~~-gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 307 (410)
T 3ef6_A 232 SALICVGAEPAD-QLARQA-GLACDRG-VIVD-HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAIL 307 (410)
T ss_dssp EEEECSCEEECC-HHHHHT-TCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHT
T ss_pred EEEEeeCCeecH-HHHHhC-CCccCCe-EEEc-cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHc
Confidence 999999999998 455554 2333345 7777 5668899999999999763 2489999999999998
Q ss_pred hc
Q 016519 383 SI 384 (388)
Q Consensus 383 ~~ 384 (388)
..
T Consensus 308 g~ 309 (410)
T 3ef6_A 308 GK 309 (410)
T ss_dssp TC
T ss_pred CC
Confidence 75
No 63
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=4.6e-32 Score=260.69 Aligned_cols=304 Identities=14% Similarity=0.169 Sum_probs=200.6
Q ss_pred CCeEEEECCChHHHHHHHHHhh-cCCCEEEEe--------ecCCCCccccc-CCcCceeeecCCcc----ccCCCCCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFPS 72 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~-~g~~v~lie--------~~~~~gg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~ 72 (388)
++||+||||||+|+++|..|++ .|++|+||| +...+||.|.. .+++...+.....+ .....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5899999999999999999999 999999999 35667886542 22222111000000 0000001000
Q ss_pred CCC-CCCCHHHHHH-----------HHHHHHHhc-CCcceeEeceEEEEEEEeCCCCcEEEEE---cccCCCCceeeEEE
Q 016519 73 SYP-MFVSRAQFIE-----------YLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKA---SNLLSPGRVIEEYY 136 (388)
Q Consensus 73 ~~~-~~~~~~~~~~-----------~l~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~~~~~~~~~~~~~~ 136 (388)
... ...+...+.+ ++...+++. +++. +.+. +..++ . ..+.+.. .++. .. .++
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g~-~~~i~--~--~~v~v~~~~~~~g~---~~--~~~ 150 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTF--HQGF-GALQD--N--HTVLVRESADPNSA---VL--ETL 150 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE--EESE-EEEEE--T--TEEEEESSSSTTSC---EE--EEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE--EEeE-EEEee--C--CEEEEEeeccCCCC---ce--EEE
Confidence 000 0112233332 223334455 6554 4553 55543 2 3444432 1220 01 478
Q ss_pred eeCEEEEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhh---cCeeE
Q 016519 137 SGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTS 213 (388)
Q Consensus 137 ~~d~li~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---~~~v~ 213 (388)
.||+||+||| ++|..|+++|.+. +++..++..... .+++++|||+|.+|+|+|..+.+. |.+|+
T Consensus 151 ~~d~lviAtG--s~p~~p~i~g~~~----------~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vt 217 (490)
T 1fec_A 151 DTEYILLATG--SWPQHLGIEGDDL----------CITSNEAFYLDE-APKRALCVGGGYISIEFAGIFNAYKARGGQVD 217 (490)
T ss_dssp EEEEEEECCC--EEECCCCSBTGGG----------CBCHHHHTTCSS-CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEE
T ss_pred EcCEEEEeCC--CCCCCCCCCCccc----------eecHHHHhhhhh-cCCeEEEECCCHHHHHHHHHHHhhccCcCeEE
Confidence 9999999999 6888888887642 234433333332 378999999999999999999999 99999
Q ss_pred EEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEec
Q 016519 214 LVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLP 293 (388)
Q Consensus 214 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 293 (388)
++++.+ +.+|.. ++.+...+.+.+++.+|+++.
T Consensus 218 lv~~~~---------~~l~~~--------------------------------------d~~~~~~l~~~l~~~GV~i~~ 250 (490)
T 1fec_A 218 LAYRGD---------MILRGF--------------------------------------DSELRKQLTEQLRANGINVRT 250 (490)
T ss_dssp EEESSS---------SSSTTS--------------------------------------CHHHHHHHHHHHHHTTEEEEE
T ss_pred EEEcCC---------Cccccc--------------------------------------CHHHHHHHHHHHHhCCCEEEe
Confidence 999998 333310 111122224566678999988
Q ss_pred C--ceEEEcC-----eEEeeCCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEecccc
Q 016519 294 G--IESIRGN-----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK 365 (388)
Q Consensus 294 ~--v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~ 365 (388)
+ |.+++.+ .+.+.+|+++++|.||+|+|++||+..+ ++......+++|++.+| +.++++.|+|||+|||++
T Consensus 251 ~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~ 329 (490)
T 1fec_A 251 HENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVD-AYSKTNVDNIYAIGDVTD 329 (490)
T ss_dssp TCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECGGGGC
T ss_pred CCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEEC-CCCccCCCCEEEEeccCC
Confidence 8 8888643 4677788899999999999999998645 45553344668999998 557789999999999987
Q ss_pred C---cccchhhHHHHHHHhhh
Q 016519 366 G---LYGAAADAQNIADHINS 383 (388)
Q Consensus 366 ~---~~~a~~~~~~~a~~i~~ 383 (388)
. ...|..+|+.+|.+|..
T Consensus 330 ~~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 330 RVMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp SCCCHHHHHHHHHHHHHHHHS
T ss_pred CccCHHHHHHHHHHHHHHhcC
Confidence 5 33789999999999986
No 64
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.1e-32 Score=263.14 Aligned_cols=303 Identities=16% Similarity=0.155 Sum_probs=198.2
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeec---C------CCCccccc-CCcCceeeecCCcc----ccCCCCCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERE---N------CYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFP 71 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~---~------~~gg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~ 71 (388)
..+||+||||||+|+++|..|++.|++|+|||+. + .+||.|.. .+.+...+...... .....+.+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 4689999999999999999999999999999942 1 37776652 22222111000000 000001111
Q ss_pred CCCCCCCCHHHHHHHHHHHH-----------HhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCE
Q 016519 72 SSYPMFVSRAQFIEYLDHYV-----------SHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRF 140 (388)
Q Consensus 72 ~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 140 (388)
.......+...+.++.+.+. +..+++. ....+..++ ...+.|.+.++ + .+++||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~g~a~~~~----~~~v~v~~~~g----~---~~~~~d~ 153 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEY---INGLGSFVD----SHTLLAKLKSG----E---RTITAQT 153 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE---ECSEEEEEE----TTEEEEECTTC----C---EEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE---EEeEEEEcc----CCEEEEEeCCC----e---EEEEcCE
Confidence 11111234445544444333 2334442 333333222 24566665543 1 5799999
Q ss_pred EEEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 141 LVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 141 li~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
||+||| ++|..|+++|.+.+ .++..+...... .+++++|||+|.+|+|+|..+++.|.+|+++.|+..
T Consensus 154 lviATG--s~p~~p~i~G~~~~---------~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (483)
T 3dgh_A 154 FVIAVG--GRPRYPDIPGAVEY---------GITSDDLFSLDR-EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV 221 (483)
T ss_dssp EEECCC--EEECCCSSTTHHHH---------CBCHHHHTTCSS-CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS
T ss_pred EEEeCC--CCcCCCCCCCcccc---------cCcHHHHhhhhh-cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 999999 79999999987644 244444433333 378999999999999999999999999999998542
Q ss_pred hhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEE
Q 016519 221 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 298 (388)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~ 298 (388)
+ ..++..+ ...+.+.+++.+|+++.+ +.++
T Consensus 222 l-------~~~d~~~-----------------------------------------~~~l~~~l~~~Gv~i~~~~~v~~i 253 (483)
T 3dgh_A 222 L-------RGFDQQM-----------------------------------------AELVAASMEERGIPFLRKTVPLSV 253 (483)
T ss_dssp S-------TTSCHHH-----------------------------------------HHHHHHHHHHTTCCEEETEEEEEE
T ss_pred C-------cccCHHH-----------------------------------------HHHHHHHHHhCCCEEEeCCEEEEE
Confidence 1 1122211 122245566678888887 7777
Q ss_pred Ec--C---eEEeeCCc-----EEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-
Q 016519 299 RG--N---EVIFENGH-----SHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG- 366 (388)
Q Consensus 299 ~~--~---~v~~~~g~-----~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~- 366 (388)
+. + .+.+.++. ++++|.||+|+|++|++..+ +.......++ |++.+| +.++++.|+|||+|||+.+
T Consensus 254 ~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd-~~~~t~~~~IyA~GD~~~~~ 331 (483)
T 3dgh_A 254 EKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVD-SQEATNVANIYAVGDIIYGK 331 (483)
T ss_dssp EECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCC-TTCBCSSTTEEECSTTBTTS
T ss_pred EEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEEC-cCCccCCCCEEEEEcccCCC
Confidence 64 2 26666654 78999999999999998554 2444233455 999998 5567899999999999742
Q ss_pred ---cccchhhHHHHHHHhhhc
Q 016519 367 ---LYGAAADAQNIADHINSI 384 (388)
Q Consensus 367 ---~~~a~~~~~~~a~~i~~~ 384 (388)
...|..+|+.+|.+|...
T Consensus 332 ~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 332 PELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp CCCHHHHHHHHHHHHHHHHSC
T ss_pred CccHHHHHHHHHHHHHHHcCC
Confidence 337899999999999864
No 65
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=9.9e-33 Score=263.28 Aligned_cols=291 Identities=16% Similarity=0.203 Sum_probs=199.5
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
+||+|||||++|+++|..|++. |.+|+|||+++..+..... .+..... ... . .+..++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~---------~~~~~~g--~~~---~----~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG---------IALYLGK--EIK---N----NDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG---------HHHHHTT--CBG---G----GCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc---------chhhhcC--Ccc---c----CCHHHhhh
Confidence 5899999999999999999998 9999999998765421100 0000000 000 0 00011111
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
.+...+++.+++. ++++++..++..+ ..+.+..... ++. .+++||+||+||| ++|..|+++|.+..
T Consensus 63 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~~---g~~--~~~~~d~lviAtG--s~p~~p~i~g~~~~--- 128 (452)
T 2cdu_A 63 SSPEELSNLGANV--QMRHQVTNVDPET--KTIKVKDLIT---NEE--KTEAYDKLIMTTG--SKPTVPPIPGIDSS--- 128 (452)
T ss_dssp CCHHHHHHTTCEE--EESEEEEEEEGGG--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCCTTTTST---
T ss_pred cCHHHHHHcCCEE--EeCCEEEEEEcCC--CEEEEEecCC---Cce--EEEECCEEEEccC--CCcCCCCCCCCCCC---
Confidence 2233445667765 7899999988655 5555543211 111 6899999999999 68988988887532
Q ss_pred CCCCcceeeccCCCCC-----CCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHH
Q 016519 166 ATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLM 240 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~~-----~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
.+++...+.+. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++..+-
T Consensus 129 -----~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~---------~~l~~~~~---- 190 (452)
T 2cdu_A 129 -----RVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE---------RVLYKYFD---- 190 (452)
T ss_dssp -----TEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS---------STTTTTSC----
T ss_pred -----CEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC---------chhhhhhh----
Confidence 34443322211 11247899999999999999999999999999999988 33331111
Q ss_pred HHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc--CeE--EeeCCcEEecc
Q 016519 241 VMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NEV--IFENGHSHHFD 314 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~v--~~~~g~~~~~D 314 (388)
+.+...+.+.+++.+|+++.+ |.+++. +.+ ...+|+++++|
T Consensus 191 ---------------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D 237 (452)
T 2cdu_A 191 ---------------------------------KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSD 237 (452)
T ss_dssp ---------------------------------HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEES
T ss_pred ---------------------------------hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECC
Confidence 111122245566778998887 888864 323 33478899999
Q ss_pred EEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-------------cccchhhHHHHHHHh
Q 016519 315 SIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAAADAQNIADHI 381 (388)
Q Consensus 315 ~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~-------------~~~a~~~~~~~a~~i 381 (388)
.||+|+|++||+. +++.. ...+++|++.+| +.++++.|+|||+|||+.. ...|..||+.+|.+|
T Consensus 238 ~vv~a~G~~p~~~-ll~~~-l~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i 314 (452)
T 2cdu_A 238 IAILCIGFRPNTE-LLKGK-VAMLDNGAIITD-EYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNL 314 (452)
T ss_dssp EEEECCCEEECCG-GGTTT-SCBCTTSCBCCC-TTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTS
T ss_pred EEEECcCCCCCHH-HHHHh-hhcCCCCCEEEC-CCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHh
Confidence 9999999999984 55544 334678999999 5578899999999999863 347999999999999
Q ss_pred hhc
Q 016519 382 NSI 384 (388)
Q Consensus 382 ~~~ 384 (388)
...
T Consensus 315 ~g~ 317 (452)
T 2cdu_A 315 TED 317 (452)
T ss_dssp SSC
T ss_pred CCC
Confidence 864
No 66
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=3.1e-32 Score=260.39 Aligned_cols=297 Identities=17% Similarity=0.189 Sum_probs=197.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecCCc----cccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQ----FCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 81 (388)
++||+||||||+|+++|..|++.|++|+|||+.+ +||.|.. .+.+...+..... +.....+..+. ....+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~--~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKA--KPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEEC--CCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCC--CCCcCHH
Confidence 4899999999999999999999999999999987 7887642 2222110000000 00000000000 0011222
Q ss_pred HHH-------HH----HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 82 QFI-------EY----LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 82 ~~~-------~~----l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
.+. ++ +...+++.+++. +.++.+ .++ . . +|.+. + .+++||+||+||| ++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~-~~~--~--~--~v~v~-g--------~~~~~d~lViATG--s~ 142 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVEL--LRGFAR-LVG--P--K--EVEVG-G--------ERYGAKSLILATG--SE 142 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESCEE-EEE--T--T--EEEET-T--------EEEEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EeeeEE-Ecc--C--C--EEEEc-c--------EEEEeCEEEEcCC--CC
Confidence 222 22 234455567665 555543 232 2 2 34444 3 7899999999999 68
Q ss_pred CCCCC-CCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhh
Q 016519 151 PFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLR 229 (388)
Q Consensus 151 p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~ 229 (388)
|..|+ +++.. .++++.+........+++++|||+|.+|+|+|..|++.|.+|+++.+.+ +
T Consensus 143 p~~p~gi~~~~----------~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~---------~ 203 (464)
T 2eq6_A 143 PLELKGFPFGE----------DVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP---------E 203 (464)
T ss_dssp ECCBTTBCCSS----------SEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------S
T ss_pred CCCCCCCCCCC----------cEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC---------c
Confidence 88776 55421 2455555544443247899999999999999999999999999999988 3
Q ss_pred cCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC----eE
Q 016519 230 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EV 303 (388)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v 303 (388)
++|.. ++.+...+.+.+++.+|+++.+ +.+++.+ .+
T Consensus 204 ~l~~~--------------------------------------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v 245 (464)
T 2eq6_A 204 ILPQG--------------------------------------DPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHV 245 (464)
T ss_dssp SSTTS--------------------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEE
T ss_pred ccccc--------------------------------------CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEE
Confidence 33310 1111222245566678999988 8887643 25
Q ss_pred Eee-C--Cc--EEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC---cccchhhH
Q 016519 304 IFE-N--GH--SHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG---LYGAAADA 374 (388)
Q Consensus 304 ~~~-~--g~--~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~---~~~a~~~~ 374 (388)
.+. + |+ ++++|.||+|+|++||++.+ ++......+++|++.+| +.++++.|+|||+|||+.. ...|..||
T Consensus 246 ~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~l~~~A~~~g 324 (464)
T 2eq6_A 246 RLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVN-ARMETSVPGVYAIGDAARPPLLAHKAMREG 324 (464)
T ss_dssp EEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTCSSCCHHHHHHHH
T ss_pred EEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHH
Confidence 555 6 77 89999999999999998554 33332234568999998 4577899999999999875 33799999
Q ss_pred HHHHHHhhhc
Q 016519 375 QNIADHINSI 384 (388)
Q Consensus 375 ~~~a~~i~~~ 384 (388)
+.+|.+|...
T Consensus 325 ~~aa~~i~g~ 334 (464)
T 2eq6_A 325 LIAAENAAGK 334 (464)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 9999999863
No 67
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=5.8e-33 Score=266.98 Aligned_cols=298 Identities=15% Similarity=0.150 Sum_probs=198.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecC----CccccCCCCCCCCCCCCCCCHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (388)
++||+|||||++|+++|..|++.|++|+|||+ ..+||.|.. .+++...+... ..+...+.+.+....+ ..+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~-~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP-IFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC-EECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC-ccCHH
Confidence 48999999999999999999999999999999 567776542 22221110000 0000001111100000 11222
Q ss_pred -----------HHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc-ccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 82 -----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 82 -----------~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
.+..++....+..+++. ..+ .+..++. . .+... ++ .++.+|++|+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~i~~----~--~v~v~~~~--------~~~~~d~lviAtG--~ 164 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHI--YES-RAVFVDE----H--TLELSVTG--------ERISAEKILIATG--A 164 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEEEET----T--EEEETTTC--------CEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEeeC----C--EEEEecCC--------eEEEeCEEEEccC--C
Confidence 23333444455556653 333 4444431 2 25554 32 6899999999999 6
Q ss_pred CCC-CCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHh
Q 016519 150 NPF-TPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLL 228 (388)
Q Consensus 150 ~p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~ 228 (388)
.|. .|.++|.+.. .+..++..... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+
T Consensus 165 ~p~~~p~i~G~~~~----------~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~--------- 224 (484)
T 3o0h_A 165 KIVSNSAIKGSDLC----------LTSNEIFDLEK-LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD--------- 224 (484)
T ss_dssp EECCC--CBTGGGS----------BCTTTGGGCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------
T ss_pred CcccCCCCCCcccc----------ccHHHHHhHHh-cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC---------
Confidence 888 8888886532 33333333333 37899999999999999999999999999999988
Q ss_pred hcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC----e
Q 016519 229 RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----E 302 (388)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~ 302 (388)
.+++.. .+.+...+.+.+++.+++++.+ |.+++.+ .
T Consensus 225 ~~l~~~--------------------------------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~ 266 (484)
T 3o0h_A 225 LILRNF--------------------------------------DYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYN 266 (484)
T ss_dssp SSSTTS--------------------------------------CHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEE
T ss_pred cccccc--------------------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEE
Confidence 222210 1111222345566678999887 8888754 4
Q ss_pred EEeeCCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCcc---cchhhHHHHH
Q 016519 303 VIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAAADAQNIA 378 (388)
Q Consensus 303 v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~~---~a~~~~~~~a 378 (388)
+.+.+|+++++|.||+|+|++|++..+ +.......+++|++.+| +.++++.|+|||+|||++... .|..+|+.+|
T Consensus 267 v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa 345 (484)
T 3o0h_A 267 VVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVD-EKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFV 345 (484)
T ss_dssp EEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHH
T ss_pred EEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCCcCHHHHHHHHHHHH
Confidence 778899999999999999999998544 34443345678999998 566799999999999988543 8899999999
Q ss_pred HHhhhc
Q 016519 379 DHINSI 384 (388)
Q Consensus 379 ~~i~~~ 384 (388)
.+|...
T Consensus 346 ~~i~~~ 351 (484)
T 3o0h_A 346 KNAFEN 351 (484)
T ss_dssp HHHHC-
T ss_pred HHHcCC
Confidence 999864
No 68
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.98 E-value=1.8e-32 Score=261.72 Aligned_cols=300 Identities=16% Similarity=0.184 Sum_probs=199.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecCC----ccccCCCCCCCCCCCCCCCHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRAQ 82 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 82 (388)
+||+||||||+|+++|..|++.|++|+|||+++.+||.|.. .+.+...+.... .+.. ..+..+.... ..+...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~~~-~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVKGV-ELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEECCE-EECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccCCC-ccCHHH
Confidence 79999999999999999999999999999999889987652 222111000000 0000 0000000000 012222
Q ss_pred HH-----------HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 016519 83 FI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (388)
Q Consensus 83 ~~-----------~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p 151 (388)
+. ..+...+++.+++. +.+..+ .+ + ...+.|.+ ++ .++.||+||+||| ++|
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i--~--~~~~~v~~-~g--------~~~~~d~lviAtG--~~p 141 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIAR--HQGTAR-FL--S--ERKVLVEE-TG--------EELEARYILIATG--SAP 141 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEE-ES--S--SSEEEETT-TC--------CEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEE-Ee--c--CCeEEEee-CC--------EEEEecEEEECCC--CCC
Confidence 22 22344455566665 555433 22 1 24455544 33 6899999999999 688
Q ss_pred CCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcC
Q 016519 152 FTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYV 231 (388)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~ 231 (388)
..|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+++ +++
T Consensus 142 ~~~~~~g~~~~--------~v~~~~~~~~~~~-~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~---------~~l 203 (455)
T 2yqu_A 142 LIPPWAQVDYE--------RVVTSTEALSFPE-VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD---------RIL 203 (455)
T ss_dssp CCCTTBCCCSS--------SEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------SSC
T ss_pred CCCCCCCCCcC--------cEechHHhhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC---------ccc
Confidence 88887775431 3556555444333 37899999999999999999999999999999988 333
Q ss_pred ChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC--e--EEe
Q 016519 232 PCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--E--VIF 305 (388)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~--v~~ 305 (388)
|.. ++.+...+.+.+++.+++++.+ |.+++.+ . +.+
T Consensus 204 ~~~--------------------------------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~ 245 (455)
T 2yqu_A 204 PTM--------------------------------------DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVEL 245 (455)
T ss_dssp TTS--------------------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE
T ss_pred ccc--------------------------------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE
Confidence 310 0111112234555668888887 7777642 3 444
Q ss_pred eCCcEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCcc---cchhhHHHHHHHh
Q 016519 306 ENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAAADAQNIADHI 381 (388)
Q Consensus 306 ~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~~---~a~~~~~~~a~~i 381 (388)
.+|+++++|.||+|+|++|+++.+ ++......+++|++.++ +.++++.|+||++|||+.... .|..+|+.+|.+|
T Consensus 246 ~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i 324 (455)
T 2yqu_A 246 EGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVD-EHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHM 324 (455)
T ss_dssp TTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCC-TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeEC-CCcccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHH
Confidence 588899999999999999998543 34442333567889988 456788999999999987643 6899999999999
Q ss_pred hhc
Q 016519 382 NSI 384 (388)
Q Consensus 382 ~~~ 384 (388)
...
T Consensus 325 ~~~ 327 (455)
T 2yqu_A 325 VRG 327 (455)
T ss_dssp HHS
T ss_pred cCC
Confidence 863
No 69
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.98 E-value=7.3e-33 Score=262.67 Aligned_cols=275 Identities=17% Similarity=0.215 Sum_probs=188.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
..+||+||||||+|+++|..|++.|++|+|||+.+.+||.|... ++ .+....++.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------ip---------~~~~~~~~~~ 176 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------IP---------GFKLEKSVVE 176 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------SC---------TTTSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------CC---------CccCCHHHHH
Confidence 46899999999999999999999999999999999999876521 11 1212245666
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
+..+++++.++++ ++++.|. .. +.+.+ ..+.||+||+|||+ ..|..+.++|.+..
T Consensus 177 ~~~~~l~~~gv~~--~~~~~v~--------~~--v~~~~---------~~~~~d~vvlAtG~-~~~~~~~ipG~~~~--- 231 (456)
T 2vdc_G 177 RRVKLLADAGVIY--HPNFEVG--------RD--ASLPE---------LRRKHVAVLVATGV-YKARDIKAPGSGLG--- 231 (456)
T ss_dssp HHHHHHHHTTCEE--ETTCCBT--------TT--BCHHH---------HHSSCSEEEECCCC-CEECCTTCSCCTTT---
T ss_pred HHHHHHHHCCcEE--EeCCEec--------cE--EEhhH---------hHhhCCEEEEecCC-CCCCCCCCCCCcCC---
Confidence 6777778888776 7776541 11 22222 33579999999996 24667778876521
Q ss_pred CCCCcceeeccCC---------CC--------CCCCCCCeEEEECCCCCHHHHHHHHHhhcC-eeEEEEecchhhhhHHH
Q 016519 166 ATGTGEVIHSTQY---------KN--------GKPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSPMVYLGLVL 227 (388)
Q Consensus 166 ~~~~~~~~~~~~~---------~~--------~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~-~v~~~~r~~~~~~~~~~ 227 (388)
.+++..++ .. .....+++|+|||+|.+|+|+|..+.+.|. +|++++|++..
T Consensus 232 -----gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~------ 300 (456)
T 2vdc_G 232 -----NIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK------ 300 (456)
T ss_dssp -----TEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST------
T ss_pred -----CcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc------
Confidence 22221110 00 122458999999999999999999999987 59999998822
Q ss_pred hhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe---
Q 016519 228 LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE--- 302 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~--- 302 (388)
.+|....+ .+.++..+|+++.+ +.++..++
T Consensus 301 --~~p~~~~e-------------------------------------------~~~~~~~Gv~~~~~~~~~~i~~~g~v~ 335 (456)
T 2vdc_G 301 --NMPGSQRE-------------------------------------------VAHAEEEGVEFIWQAAPEGFTGDTVVT 335 (456)
T ss_dssp --TCSSCHHH-------------------------------------------HHHHHHTTCEEECCSSSCCEEEEEEEE
T ss_pred --CCCCCHHH-------------------------------------------HHHHHHCCCEEEeCCCceEEeCCCcEE
Confidence 02211000 11122234444443 33332211
Q ss_pred -EEe------------------eCC--cEEeccEEEEccCCCCCCcc-cccCCCCccCCCCCcCCCCCCCccCCCceEEE
Q 016519 303 -VIF------------------ENG--HSHHFDSIVFCTGFKRSTNV-WLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCV 360 (388)
Q Consensus 303 -v~~------------------~~g--~~~~~D~vi~atG~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~ 360 (388)
+.+ .+| .++++|+||+|+|+.|++.. ++.......+++|++.+++..++++.|+|||+
T Consensus 336 ~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~ 415 (456)
T 2vdc_G 336 GVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAA 415 (456)
T ss_dssp TTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEEC
T ss_pred EEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEe
Confidence 111 123 46899999999999998743 56665444578899999966577999999999
Q ss_pred eccccC---cccchhhHHHHHHHhhhcc
Q 016519 361 GLSRKG---LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 361 Gd~~~~---~~~a~~~~~~~a~~i~~~l 385 (388)
||+..+ +..|+.+|+.+|.+|.+.|
T Consensus 416 GD~~~g~~~v~~A~~~G~~aA~~i~~~L 443 (456)
T 2vdc_G 416 GDIVRGASLVVWAIRDGRDAAEGIHAYA 443 (456)
T ss_dssp GGGGSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHh
Confidence 999875 4489999999999998876
No 70
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=3.2e-31 Score=253.88 Aligned_cols=347 Identities=19% Similarity=0.284 Sum_probs=204.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC-----CCEEEEeecCCCCcccccCCc-CceeeecC--CccccC--CCCCC------
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS-----IPYVILERENCYASIWKKYSY-DRLRLHLA--KQFCQL--PHLPF------ 70 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g-----~~v~lie~~~~~gg~~~~~~~-~~~~~~~~--~~~~~~--~~~~~------ 70 (388)
.+||+||||||+|+++|..|++.| .+|+|||+.+.+| |...++ +...+..+ ..+... +...+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 479999999999999999999999 9999999999887 654433 11111100 000000 00000
Q ss_pred ---------CCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCC-CCcE--EEEEcccCCCCceeeEEEee
Q 016519 71 ---------PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEA-TNMW--NVKASNLLSPGRVIEEYYSG 138 (388)
Q Consensus 71 ---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~--~v~~~~~~~~~~~~~~~~~~ 138 (388)
+.....++.+.++.+|+++++++++..+ +++++|++++..++ ...| +|.+.++. |+. .++.|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i--~~~~~V~~i~~~~~~~~~~~~~V~~~~g~--g~~--~~~~~ 181 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQS--RYGEEVLRIEPMLSAGQVEALRVISRNAD--GEE--LVRTT 181 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTE--EESEEEEEEEEEEETTEEEEEEEEEEETT--SCE--EEEEE
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEEecCCCceEEEEEEEecCC--Cce--EEEEe
Confidence 0011235678999999999999988776 99999999987621 2444 67776652 121 48999
Q ss_pred CEEEEeecCCCCCCCCCCCCcccccccCCCCc--ceeeccCCCC-CCCC-----CCCeEEEECCCCCHHHHHHHHHhh--
Q 016519 139 RFLVVASGETSNPFTPDIRGLSSFCSSATGTG--EVIHSTQYKN-GKPY-----GGKNVLVVGSGNSGMEIALDLANH-- 208 (388)
Q Consensus 139 d~li~AtG~~s~p~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~-~~~~-----~~~~v~VvG~G~~a~e~a~~l~~~-- 208 (388)
|+||+||| +.|.+|.. .+.+ .+ .++|+..+.. ...+ .+++|+|||+|.+|+|+|..|++.
T Consensus 182 d~lVlAtG--~~p~~p~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~ 251 (463)
T 3s5w_A 182 RALVVSPG--GTPRIPQV--FRAL------KGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYP 251 (463)
T ss_dssp SEEEECCC--CEECCCGG--GGGG------TTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCT
T ss_pred CEEEECCC--CCCCCcch--hhhc------CCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCC
Confidence 99999999 57777762 2233 33 5677776543 1222 588999999999999999999999
Q ss_pred cCeeEEEEecchh---hhhHHHhhcCChhhHHHHHH---HHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhh
Q 016519 209 AAKTSLVIRSPMV---YLGLVLLRYVPCGGVDTLMV---MLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCE 282 (388)
Q Consensus 209 ~~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (388)
+.+|++++|++.+ ...+....++...+.+.+.. ..+..+....... ......+.... ......+.+
T Consensus 252 ~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~l~~~ 323 (463)
T 3s5w_A 252 SVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNT--NYSVVDTDLIE------RIYGVFYRQ 323 (463)
T ss_dssp TEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGG--TSSCBCHHHHH------HHHHHHHHH
T ss_pred CCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhcc--CCCcCCHHHHH------HHHHHHHHH
Confidence 8999999999943 11111111222211111110 0011111000000 00000000000 000011111
Q ss_pred hhc-CCcEEEecC--ceEEEcC--e--EEee---CCcE--EeccEEEEccCCCCC-CcccccCCCCccCCCCCcCCCCCC
Q 016519 283 KIK-SGQIQVLPG--IESIRGN--E--VIFE---NGHS--HHFDSIVFCTGFKRS-TNVWLKGDDSMLNDDGIPKQSYPN 349 (388)
Q Consensus 283 ~~~-~~~v~~~~~--v~~~~~~--~--v~~~---~g~~--~~~D~vi~atG~~~~-~~~~~~~~~~~~~~~g~~~~~~~~ 349 (388)
.+. ..+++++.+ |++++.+ . +.+. +|+. +++|.||+|||++|+ .+.++..+...+ |.+.++.+.
T Consensus 324 ~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~---g~i~v~~~~ 400 (463)
T 3s5w_A 324 KVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL---GDHEIGRDY 400 (463)
T ss_dssp HHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB---C--CCCTTS
T ss_pred HhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh---CCcccCccc
Confidence 222 268899888 7777643 2 5555 6664 899999999999999 224544442222 778887555
Q ss_pred CccC----CCceEEEeccccC-------cc-cchhhHHHHHHHhh
Q 016519 350 HWKG----KNGLYCVGLSRKG-------LY-GAAADAQNIADHIN 382 (388)
Q Consensus 350 ~~~~----~~~vy~~Gd~~~~-------~~-~a~~~~~~~a~~i~ 382 (388)
+... .|+||++|||... .. .|.+++..++..+.
T Consensus 401 ~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 401 RLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp BCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 4433 5679999999642 22 55555555544433
No 71
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.98 E-value=8.8e-33 Score=259.85 Aligned_cols=282 Identities=17% Similarity=0.193 Sum_probs=196.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC--CEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
+||+|||||++|+++|..|++.|+ +|+|||+++..+. .... .++.+.... ..+.. +..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y-------~~~~--l~~~~l~~~--~~~~~---------~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPY-------QRPP--LSKAYLKSG--GDPNS---------LMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSB-------CSGG--GGTGGGGSC--CCTTS---------SBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCC-------CCcc--CCHHHHCCC--CCHHH---------ccC
Confidence 689999999999999999999998 9999999885541 1100 000111000 00011 111
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
+...++++.+++. +. ++|+.++... . .|.+.++ .++.||+||+||| +.|..|+++|.+..
T Consensus 62 ~~~~~~~~~~i~~--~~-~~v~~id~~~--~--~v~~~~g--------~~~~~d~lvlAtG--~~p~~~~i~g~~~~--- 121 (404)
T 3fg2_P 62 RPEKFFQDQAIEL--IS-DRMVSIDREG--R--KLLLASG--------TAIEYGHLVLATG--ARNRMLDVPNASLP--- 121 (404)
T ss_dssp SCHHHHHHTTEEE--EC-CCEEEEETTT--T--EEEESSS--------CEEECSEEEECCC--EEECCCCSTTTTST---
T ss_pred CCHHHHHhCCCEE--EE-EEEEEEECCC--C--EEEECCC--------CEEECCEEEEeeC--CCccCCCCCCCCCC---
Confidence 1223445567665 66 8898887643 2 4777665 6899999999999 68888888886532
Q ss_pred CCCCcceeeccCCCC-----CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHH
Q 016519 166 ATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLM 240 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
.+++.....+ .....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..+.
T Consensus 122 -----~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~---------~~~~~~~~---- 183 (404)
T 3fg2_P 122 -----DVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP---------RVMARVVT---- 183 (404)
T ss_dssp -----TEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------STTTTTSC----
T ss_pred -----cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC---------cchhhccC----
Confidence 2332221111 111247899999999999999999999999999999988 33322111
Q ss_pred HHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-----eEEeeCCcEEec
Q 016519 241 VMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIFENGHSHHF 313 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~~g~~~~~ 313 (388)
+.+...+.+.+++.+|+++.+ |.+++.+ .|.+.+|+++++
T Consensus 184 ---------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~a 230 (404)
T 3fg2_P 184 ---------------------------------PEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPC 230 (404)
T ss_dssp ---------------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEEC
T ss_pred ---------------------------------HHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEc
Confidence 111222245666789999887 8888653 578899999999
Q ss_pred cEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-------------cccchhhHHHHHHH
Q 016519 314 DSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAAADAQNIADH 380 (388)
Q Consensus 314 D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~-------------~~~a~~~~~~~a~~ 380 (388)
|.||+|+|+.||+ .++... ++...+| +.+| ..++++.|+|||+|||+.. +..|..||+.+|.+
T Consensus 231 D~Vv~a~G~~p~~-~l~~~~-gl~~~~G-i~vd-~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~ 306 (404)
T 3fg2_P 231 DLVVVGVGVIPNV-EIAAAA-GLPTAAG-IIVD-QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAAR 306 (404)
T ss_dssp SEEEECCCEEECC-HHHHHT-TCCBSSS-EEEC-TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHH
T ss_pred CEEEECcCCccCH-HHHHhC-CCCCCCC-EEEC-CCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHH
Confidence 9999999999998 455554 3333356 7777 5677899999999999763 24799999999999
Q ss_pred hhhc
Q 016519 381 INSI 384 (388)
Q Consensus 381 i~~~ 384 (388)
|...
T Consensus 307 i~g~ 310 (404)
T 3fg2_P 307 LTGD 310 (404)
T ss_dssp TTTC
T ss_pred hCCC
Confidence 9875
No 72
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.98 E-value=3.3e-33 Score=269.12 Aligned_cols=307 Identities=14% Similarity=0.124 Sum_probs=198.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC--------CCCc-ccccCCcCceeeecCCcccc-----CCCCCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN--------CYAS-IWKKYSYDRLRLHLAKQFCQ-----LPHLPFPS 72 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~--------~~gg-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 72 (388)
.|||+||||||+|+.+|..+++.|.+|+|||+.. .+|| +.+..|.|...+.....+.. ...+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4899999999999999999999999999999643 3566 34444444322211110000 00000000
Q ss_pred CCCCCCCHHHHHHHHHHH-----------HHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEE
Q 016519 73 SYPMFVSRAQFIEYLDHY-----------VSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (388)
Q Consensus 73 ~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~l 141 (388)
. ..-.+...+.++.+.. .++.+++. +.....-++ .....|...+... .. .++++|++
T Consensus 122 ~-~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~---i~G~a~f~~----~~~v~V~~~~~~~--~~--~~i~a~~i 189 (542)
T 4b1b_A 122 D-NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKY---INGLAKLKD----KNTVSYYLKGDLS--KE--ETVTGKYI 189 (542)
T ss_dssp E-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE---ECEEEEEEE----TTEEEEEEC--CC--CE--EEEEEEEE
T ss_pred C-cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE---EeeeEEEcC----CCcceEeecccCC--ce--EEEeeeeE
Confidence 0 0011333333333322 33345442 222222222 2344444433111 11 78999999
Q ss_pred EEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchh
Q 016519 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMV 221 (388)
Q Consensus 142 i~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~ 221 (388)
|+||| ++|.+|+..+.... ..+++.+....... +++++|||+|++|+|+|..+++.|.+||++.|+..
T Consensus 190 iIATG--s~P~~P~~~~~~~~--------~~~ts~~~l~l~~l-P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~- 257 (542)
T 4b1b_A 190 LIATG--CRPHIPDDVEGAKE--------LSITSDDIFSLKKD-PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV- 257 (542)
T ss_dssp EECCC--EEECCCSSSBTHHH--------HCBCHHHHTTCSSC-CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS-
T ss_pred EeccC--CCCCCCCcccCCCc--------cccCchhhhccccC-CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc-
Confidence 99999 79998875443321 24666666665554 88999999999999999999999999999987652
Q ss_pred hhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEE
Q 016519 222 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 299 (388)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~ 299 (388)
+|.. ++.+...+.+.+++.+++++.+ +.+++
T Consensus 258 ---------L~~~--------------------------------------D~ei~~~l~~~l~~~gi~~~~~~~v~~~~ 290 (542)
T 4b1b_A 258 ---------LRGF--------------------------------------DQQCAVKVKLYMEEQGVMFKNGILPKKLT 290 (542)
T ss_dssp ---------STTS--------------------------------------CHHHHHHHHHHHHHTTCEEEETCCEEEEE
T ss_pred ---------cccc--------------------------------------chhHHHHHHHHHHhhcceeecceEEEEEE
Confidence 2211 1222333356677788998887 66665
Q ss_pred cC----eEEeeCCcEEeccEEEEccCCCCCCcccccCCCCc-cCCCCCcCCCCCCCccCCCceEEEeccccCc----ccc
Q 016519 300 GN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSM-LNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL----YGA 370 (388)
Q Consensus 300 ~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~----~~a 370 (388)
.. .+.+.++.++.+|.|++|+|++||+..+..+...+ .+..|.++++++.++|+.|+|||+||+.++. ..|
T Consensus 291 ~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A 370 (542)
T 4b1b_A 291 KMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVA 370 (542)
T ss_dssp EETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHH
T ss_pred ecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEeccccCCchhHHHHH
Confidence 43 35667888999999999999999997664443233 3556666555588999999999999998653 278
Q ss_pred hhhHHHHHHHhhhc
Q 016519 371 AADAQNIADHINSI 384 (388)
Q Consensus 371 ~~~~~~~a~~i~~~ 384 (388)
.++++.++.+|...
T Consensus 371 ~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 371 IKAGEILARRLFKD 384 (542)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999998763
No 73
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.98 E-value=3e-32 Score=259.62 Aligned_cols=288 Identities=17% Similarity=0.178 Sum_probs=197.5
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
+||+|||||++|+++|..|++. |.+|+|||+++..+.... .. +... ... +.+.+++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~--~~-------~~~~--~~~---------~~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA--GM-------QLYL--EGK---------VKDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG--GH-------HHHH--TTS---------SCCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc--cc-------hhhh--cCc---------cCCHHHhhc
Confidence 4899999999999999999998 899999999886552100 00 0000 000 001111111
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEE-cccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
+..+.+++.+++. +.++.+..++..+ +.+.+.. .++ +. .+++||+||+||| ++|..|+++|.+..
T Consensus 61 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~~~~~~~g----~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~-- 126 (447)
T 1nhp_A 61 MTGEKMESRGVNV--FSNTEITAIQPKE--HQVTVKDLVSG----EE--RVENYDKLIISPG--AVPFELDIPGKDLD-- 126 (447)
T ss_dssp CCHHHHHHTTCEE--EETEEEEEEETTT--TEEEEEETTTC----CE--EEEECSEEEECCC--EEECCCCSTTTTSB--
T ss_pred CCHHHHHHCCCEE--EECCEEEEEeCCC--CEEEEEecCCC----ce--EEEeCCEEEEcCC--CCcCCCCCCCCCCC--
Confidence 2233445567765 7899998887654 4544443 122 11 4699999999999 68888988887532
Q ss_pred cCCCCcceeeccCCCCC-------CCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHH
Q 016519 165 SATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVD 237 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~ 237 (388)
.+++...+.+. ....+++++|||+|.+|+|+|..+++.|.+|+++.+.+ ..++..+
T Consensus 127 ------~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~---------~~l~~~~-- 189 (447)
T 1nhp_A 127 ------NIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD---------RPLGVYL-- 189 (447)
T ss_dssp ------SEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------STTTTTC--
T ss_pred ------CeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc---------ccccccC--
Confidence 24443322110 11147899999999999999999999999999999988 2222100
Q ss_pred HHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe-E--EeeCCcEEe
Q 016519 238 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-V--IFENGHSHH 312 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-v--~~~~g~~~~ 312 (388)
++.+...+.+.+++.+++++.+ +.+++.++ + +..++++++
T Consensus 190 -----------------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~ 234 (447)
T 1nhp_A 190 -----------------------------------DKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNAYD 234 (447)
T ss_dssp -----------------------------------CHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEESSCEEE
T ss_pred -----------------------------------CHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECCCEEE
Confidence 0111222346677789999987 88887542 2 334677899
Q ss_pred ccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-------------cccchhhHHHHHH
Q 016519 313 FDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAAADAQNIAD 379 (388)
Q Consensus 313 ~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~-------------~~~a~~~~~~~a~ 379 (388)
+|.||+|+|++|+++ +++.. ...+.+|++.+| +.++++.|+|||+|||+.. ...|..||+.+|.
T Consensus 235 ~d~vi~a~G~~p~~~-~~~~~-~~~~~~G~i~Vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~ 311 (447)
T 1nhp_A 235 ADLVVVAVGVRPNTA-WLKGT-LELHPNGLIKTD-EYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVK 311 (447)
T ss_dssp CSEEEECSCEEESCG-GGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHH
T ss_pred CCEEEECcCCCCChH-HHHhh-hhhcCCCcEEEC-ccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHH
Confidence 999999999999984 55444 334668999998 5577899999999999852 3479999999999
Q ss_pred Hhhhc
Q 016519 380 HINSI 384 (388)
Q Consensus 380 ~i~~~ 384 (388)
+|...
T Consensus 312 ~i~g~ 316 (447)
T 1nhp_A 312 NLEEP 316 (447)
T ss_dssp TSSSC
T ss_pred hhcCC
Confidence 99864
No 74
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.98 E-value=3.7e-32 Score=261.00 Aligned_cols=289 Identities=16% Similarity=0.237 Sum_probs=197.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
.+||+|||||++|+++|..|++. |.+|+|||+.+..+..... .+... .. ...+..++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~---------~~~~~---~~--------~~~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG---------LPYVI---SG--------AIASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG---------HHHHH---TT--------SSSCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC---------cchhh---cC--------CcCCHHHhh
Confidence 36999999999999999999997 8999999998865421110 00000 00 000111111
Q ss_pred H-HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEE-cccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccc
Q 016519 85 E-YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSF 162 (388)
Q Consensus 85 ~-~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~ 162 (388)
. +.+.+.+..+++. +++++|+.++..+ +.+.+.. .++ +. .+++||+||+||| ++|..|+++|.+..
T Consensus 96 ~~~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~~g----~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~ 163 (480)
T 3cgb_A 96 ARNVKTFRDKYGIDA--KVRHEVTKVDTEK--KIVYAEHTKTK----DV--FEFSYDRLLIATG--VRPVMPEWEGRDLQ 163 (480)
T ss_dssp SSCHHHHHHTTCCEE--ESSEEEEEEETTT--TEEEEEETTTC----CE--EEEECSEEEECCC--EEECCCCCBTTTSB
T ss_pred hcCHHHHHhhcCCEE--EeCCEEEEEECCC--CEEEEEEcCCC----ce--EEEEcCEEEECCC--CcccCCCCCCccCC
Confidence 1 1233445557765 7889999988654 5555554 223 11 4799999999999 68888888887532
Q ss_pred cccCCCCcceeeccCCCCC---C----CCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhh
Q 016519 163 CSSATGTGEVIHSTQYKNG---K----PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGG 235 (388)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~---~----~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~ 235 (388)
.+++.....+. . ...+++++|||+|.+|+|+|..+.+.|.+|+++.+++.+ ...++..+
T Consensus 164 --------~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~------l~~~~~~~ 229 (480)
T 3cgb_A 164 --------GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHI------GTIYDGDM 229 (480)
T ss_dssp --------TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGT------TSSSCHHH
T ss_pred --------CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCch------hhcCCHHH
Confidence 23433222111 0 115889999999999999999999999999999998821 01112111
Q ss_pred HHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCe-E--EeeCCcE
Q 016519 236 VDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-V--IFENGHS 310 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-v--~~~~g~~ 310 (388)
...+.+.+++.+|+++.+ +.+++.++ + +..++.+
T Consensus 230 -----------------------------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~ 268 (480)
T 3cgb_A 230 -----------------------------------------AEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGT 268 (480)
T ss_dssp -----------------------------------------HHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEE
T ss_pred -----------------------------------------HHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCE
Confidence 122245566678888877 77776542 2 3345668
Q ss_pred EeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC-------------cccchhhHHHH
Q 016519 311 HHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAAADAQNI 377 (388)
Q Consensus 311 ~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~-------------~~~a~~~~~~~ 377 (388)
+++|.||+|+|++|+++ +++......+++|++.+| +.++++.|+|||+|||+.. ...|..||+.+
T Consensus 269 i~~D~vi~a~G~~p~~~-~l~~~g~~~~~~G~I~Vd-~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~a 346 (480)
T 3cgb_A 269 YKADLVLVSVGVKPNTD-FLEGTNIRTNHKGAIEVN-AYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLA 346 (480)
T ss_dssp EECSEEEECSCEEESCG-GGTTSCCCBCTTSCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHH
T ss_pred EEcCEEEECcCCCcChH-HHHhCCcccCCCCCEEEC-CCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHH
Confidence 99999999999999984 555553344678999998 5677889999999999742 34799999999
Q ss_pred HHHhhhc
Q 016519 378 ADHINSI 384 (388)
Q Consensus 378 a~~i~~~ 384 (388)
|.+|...
T Consensus 347 a~~i~g~ 353 (480)
T 3cgb_A 347 GLNMLDK 353 (480)
T ss_dssp HHHHTTC
T ss_pred HHHhcCC
Confidence 9999764
No 75
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.98 E-value=6.9e-32 Score=252.13 Aligned_cols=282 Identities=16% Similarity=0.207 Sum_probs=197.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--CCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
++||+|||||++|+++|..|++.| .+|+++|+++ |..|....++. .+.......++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~~-------------------~~~~~~~~~~~~ 62 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLST-------------------GFSKNKDADGLA 62 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGGG-------------------TTTTTCCHHHHE
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccccH-------------------HHhCCCCHHHhh
Confidence 489999999999999999999998 5789999875 22222111100 011112233333
Q ss_pred H-HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 016519 85 E-YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (388)
Q Consensus 85 ~-~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~ 163 (388)
. ++..++++.+++. +.+++|..++... ++|.+.+ .++.||+||+||| ++|..|+++|.+.
T Consensus 63 ~~~~~~~~~~~~v~~--~~~~~v~~i~~~~----~~v~~~~---------~~~~~d~lviAtG--~~p~~p~i~g~~~-- 123 (384)
T 2v3a_A 63 MAEPGAMAEQLNARI--LTHTRVTGIDPGH----QRIWIGE---------EEVRYRDLVLAWG--AEPIRVPVEGDAQ-- 123 (384)
T ss_dssp EECHHHHHHHTTCEE--ECSCCCCEEEGGG----TEEEETT---------EEEECSEEEECCC--EEECCCCCBSTTT--
T ss_pred ccCHHHHHHhCCcEE--EeCCEEEEEECCC----CEEEECC---------cEEECCEEEEeCC--CCcCCCCCCCcCc--
Confidence 2 4566667778775 7788888887543 3466643 6799999999999 6888888887652
Q ss_pred ccCCCCcceeeccCCCCCC-----CCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHH
Q 016519 164 SSATGTGEVIHSTQYKNGK-----PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDT 238 (388)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-----~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 238 (388)
..+++..++.+.. ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..+-
T Consensus 124 ------~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~---------~~~~~~~~-- 186 (384)
T 2v3a_A 124 ------DALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE---------QVMPGLLH-- 186 (384)
T ss_dssp ------TCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS---------SSSTTTSC--
T ss_pred ------CCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc---------chhhcccC--
Confidence 1345444332211 1237899999999999999999999999999999988 22221100
Q ss_pred HHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC----eEEeeCCcEEe
Q 016519 239 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVIFENGHSHH 312 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~~g~~~~ 312 (388)
+.+...+.+.+++.+++++.+ +.+++.+ .+.+.+|++++
T Consensus 187 -----------------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~ 231 (384)
T 2v3a_A 187 -----------------------------------PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIP 231 (384)
T ss_dssp -----------------------------------HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred -----------------------------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEE
Confidence 111122245566778888877 7777642 46778899999
Q ss_pred ccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEecccc--C-----cccchhhHHHHHHHhhhc
Q 016519 313 FDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK--G-----LYGAAADAQNIADHINSI 384 (388)
Q Consensus 313 ~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~--~-----~~~a~~~~~~~a~~i~~~ 384 (388)
+|.||+|+|++|++. +++.. ++...+| +.+| +.++++.|+|||+|||+. + ...|..||+.+|.+|...
T Consensus 232 ~d~vv~a~G~~p~~~-l~~~~-g~~~~~g-i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~ 306 (384)
T 2v3a_A 232 CDLVVSAVGLRPRTE-LAFAA-GLAVNRG-IVVD-RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGN 306 (384)
T ss_dssp ESEEEECSCEEECCH-HHHHT-TCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEECcCCCcCHH-HHHHC-CCCCCCC-EEEC-CCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCC
Confidence 999999999999984 55554 3332357 8888 457799999999999974 2 235789999999999863
No 76
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=9.4e-32 Score=256.66 Aligned_cols=296 Identities=19% Similarity=0.225 Sum_probs=195.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc-CCcCceeeecC----CccccCCC---CCCCCCCCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPH---LPFPSSYPMFV 78 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~ 78 (388)
++||+||||||+|+++|..|++.|++|+|||+ +.+||.|.. .+.+...+... ..+..+.. +..+.. ....
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCcc
Confidence 58999999999999999999999999999999 678887652 22221110000 00001111 111111 1112
Q ss_pred CHHHHHHH-----------HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 016519 79 SRAQFIEY-----------LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (388)
Q Consensus 79 ~~~~~~~~-----------l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~ 147 (388)
+...+..+ .+..+++.+++. +.++.+. ++ . ++|.+.+ .+++||+||+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~~~-~~--~----~~v~v~~---------~~~~~d~lviATG- 143 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKV--VHGWAKV-LD--G----KQVEVDG---------QRIQCEHLLLATG- 143 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECSCEEE-EE--T----TEEEETT---------EEEECSEEEECCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEEEEEE-cc--C----CEEEEee---------EEEEeCEEEEeCC-
Confidence 33333332 334555667665 5665443 22 1 2355543 6899999999999
Q ss_pred CCCCCCCC-CCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHH
Q 016519 148 TSNPFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLV 226 (388)
Q Consensus 148 ~s~p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~ 226 (388)
++|..|+ ++ .+ +.+++..+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+++
T Consensus 144 -s~p~~~~~~~-~~---------~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~------- 204 (458)
T 1lvl_A 144 -SSSVELPMLP-LG---------GPVISSTEALAPKA-LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE------- 204 (458)
T ss_dssp -EEECCBTTBC-CB---------TTEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-------
T ss_pred -CCCCCCCCCC-cc---------CcEecHHHHhhhhc-cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-------
Confidence 6777665 33 11 13556555544433 47899999999999999999999999999999998
Q ss_pred HhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEE
Q 016519 227 LLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVI 304 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~ 304 (388)
+++|. +. +.+...+.+.+++.+|+++.+ +.+++.+.+.
T Consensus 205 --~~l~~-~~-------------------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~ 244 (458)
T 1lvl_A 205 --RILPT-YD-------------------------------------SELTAPVAESLKKLGIALHLGHSVEGYENGCLL 244 (458)
T ss_dssp --SSSTT-SC-------------------------------------HHHHHHHHHHHHHHTCEEETTCEEEEEETTEEE
T ss_pred --ccccc-cC-------------------------------------HHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEE
Confidence 33331 00 111112245556678888887 8888764354
Q ss_pred ee--CC--cEEeccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc---ccchhhHHH
Q 016519 305 FE--NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---YGAAADAQN 376 (388)
Q Consensus 305 ~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---~~a~~~~~~ 376 (388)
+. +| +++++|.||+|+|++||++.+ ++......+++ ++.+| +.++++.|+||++|||+... ..|..+|+.
T Consensus 245 v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~ 322 (458)
T 1lvl_A 245 ANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAID-ERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEM 322 (458)
T ss_dssp EECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCC-TTCBCSSTTEEECGGGGCSSCCHHHHHHHHHH
T ss_pred EEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeEC-CCCcCCCCCEEEeeccCCCcccHHHHHHHHHH
Confidence 44 56 689999999999999998654 34442223445 78888 45678999999999998753 378999999
Q ss_pred HHHHhhhc
Q 016519 377 IADHINSI 384 (388)
Q Consensus 377 ~a~~i~~~ 384 (388)
+|.+|...
T Consensus 323 aa~~i~g~ 330 (458)
T 1lvl_A 323 VAEIIAGK 330 (458)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99999863
No 77
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=9e-32 Score=254.67 Aligned_cols=286 Identities=16% Similarity=0.135 Sum_probs=194.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC--CEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
.+||+|||||++|+++|..|++.|+ +|+|||+.+..+. ... ...+.+.. . .. ....+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~-------~~~--~l~~~~~~--~---~~------~~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPH-------HLP--PLSKAYLA--G---KA------TAESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCB-------CSG--GGGTTTTT--T---CS------CSGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCC-------cCC--CCcHHHhC--C---CC------ChHHhc
Confidence 4899999999999999999999998 7999999875431 100 00000000 0 00 001110
Q ss_pred HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
....+.+++.+++. +++++|+.++... ..|.+.++ .++.||+||+||| ++|..|+++|.+..
T Consensus 64 ~~~~~~~~~~gv~~--~~~~~v~~i~~~~----~~v~~~~g--------~~~~~d~lviAtG--~~p~~~~i~G~~~~-- 125 (431)
T 1q1r_A 64 LRTPDAYAAQNIQL--LGGTQVTAINRDR----QQVILSDG--------RALDYDRLVLATG--GRPRPLPVASGAVG-- 125 (431)
T ss_dssp SSCHHHHHHTTEEE--ECSCCEEEEETTT----TEEEETTS--------CEEECSEEEECCC--EEECCCGGGTTHHH--
T ss_pred ccCHHHHHhCCCEE--EeCCEEEEEECCC----CEEEECCC--------CEEECCEEEEcCC--CCccCCCCCCcccC--
Confidence 01123345567665 8889999888643 24777654 6899999999999 68888888886522
Q ss_pred cCCCC-cceeeccCCCC-----CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHH
Q 016519 165 SATGT-GEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDT 238 (388)
Q Consensus 165 ~~~~~-~~~~~~~~~~~-----~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 238 (388)
. ..+++.....+ .....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++..+-
T Consensus 126 ----~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~---------~~l~~~~~-- 190 (431)
T 1q1r_A 126 ----KANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA---------RVLERVTA-- 190 (431)
T ss_dssp ----HSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS---------STTTTTSC--
T ss_pred ----CCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC---------ccccchhh--
Confidence 0 00222221111 111247899999999999999999999999999999988 22221111
Q ss_pred HHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc---C----eEEeeCCc
Q 016519 239 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG---N----EVIFENGH 309 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~---~----~v~~~~g~ 309 (388)
+.+...+.+.+++.+|+++.+ +.+++. + .+.+.+|+
T Consensus 191 -----------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~ 235 (431)
T 1q1r_A 191 -----------------------------------PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGT 235 (431)
T ss_dssp -----------------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSC
T ss_pred -----------------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCC
Confidence 111111234555668888877 788764 2 46778999
Q ss_pred EEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccCc-------------ccchhhHHH
Q 016519 310 SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------YGAAADAQN 376 (388)
Q Consensus 310 ~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~-------------~~a~~~~~~ 376 (388)
++++|.||+|+|++|++ .+++.. ++...+| +.+| +.++++.|+|||+|||+... ..|..||+.
T Consensus 236 ~i~~D~Vv~a~G~~p~~-~l~~~~-gl~~~~g-i~Vd-~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~ 311 (431)
T 1q1r_A 236 RLPADLVIAGIGLIPNC-ELASAA-GLQVDNG-IVIN-EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARK 311 (431)
T ss_dssp EEECSEEEECCCEEECC-HHHHHT-TCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHH
T ss_pred EEEcCEEEECCCCCcCc-chhhcc-CCCCCCC-EEEC-CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHH
Confidence 99999999999999998 455544 2333345 7777 56788999999999997642 358999999
Q ss_pred HHHHhhhc
Q 016519 377 IADHINSI 384 (388)
Q Consensus 377 ~a~~i~~~ 384 (388)
+|.+|...
T Consensus 312 aa~~i~g~ 319 (431)
T 1q1r_A 312 IAAILCGK 319 (431)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99999864
No 78
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.97 E-value=2.4e-32 Score=262.40 Aligned_cols=301 Identities=16% Similarity=0.209 Sum_probs=194.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
++.+|||||||++|+++|..|.+.+++|+|||+++..- |. | .++... .+..+..++..
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~--~~-----------P-lL~~va--------~G~l~~~~i~~ 98 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFL--FT-----------P-LLPSAP--------VGTVDEKSIIE 98 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEE--CG-----------G-GGGGTT--------TTSSCGGGGEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcc--cc-----------c-chhHHh--------hccccHHHhhh
Confidence 45799999999999999999999999999999987321 10 0 000000 01111112211
Q ss_pred HHHHHHH--hcCCcceeEeceEEEEEEEeCCCCcEEEEEccc------------CCCCceeeEEEeeCEEEEeecCCCCC
Q 016519 86 YLDHYVS--HFNIVPSIRYQRSVESASYDEATNMWNVKASNL------------LSPGRVIEEYYSGRFLVVASGETSNP 151 (388)
Q Consensus 86 ~l~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~------------~~~~~~~~~~~~~d~li~AtG~~s~p 151 (388)
.++.... +.++. ....+|++++.+. ...++...+. ...++. .++.||+||+||| +.|
T Consensus 99 p~~~~~~~~~~~v~---~~~~~v~~ID~~~--k~V~l~~~~~~~~~~~~~~~~~~~~~~~--~~i~YD~LViAtG--s~~ 169 (502)
T 4g6h_A 99 PIVNFALKKKGNVT---YYEAEATSINPDR--NTVTIKSLSAVSQLYQPENHLGLHQAEP--AEIKYDYLISAVG--AEP 169 (502)
T ss_dssp EHHHHHTTCSSCEE---EEEEEEEEEEGGG--TEEEEEEEEEEEECSSSCCCCCCCTTCC--EEEECSEEEECCC--CEE
T ss_pred hHHHHHHhhcCCeE---EEEEEEEEEEhhh--CEEEEeecccceeecccccccccccCCc--eEEeCCEEEEcCC--ccc
Confidence 2222222 22333 3456788888765 4443332110 000111 7899999999999 789
Q ss_pred CCCCCCCcccccccCCCCcceeeccC----------CCCC---CCCCCCeEEEECCCCCHHHHHHHHHhhc---------
Q 016519 152 FTPDIRGLSSFCSSATGTGEVIHSTQ----------YKNG---KPYGGKNVLVVGSGNSGMEIALDLANHA--------- 209 (388)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~~---~~~~~~~v~VvG~G~~a~e~a~~l~~~~--------- 209 (388)
+.+.+||.+..++++++........+ .... ......+++|||+|++|+|+|..|++.+
T Consensus 170 ~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~ 249 (502)
T 4g6h_A 170 NTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLP 249 (502)
T ss_dssp CCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCH
T ss_pred ccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcc
Confidence 99999998766444333322111100 0000 0011357999999999999999998643
Q ss_pred -----CeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhh
Q 016519 210 -----AKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKI 284 (388)
Q Consensus 210 -----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (388)
.+|+++.+.+ +.+|.. ++.+...+.+.+
T Consensus 250 ~~~~~~~V~lve~~~---------~il~~~--------------------------------------~~~~~~~~~~~L 282 (502)
T 4g6h_A 250 ALAEEVQIHLVEALP---------IVLNMF--------------------------------------EKKLSSYAQSHL 282 (502)
T ss_dssp HHHHHCEEEEECSSS---------SSSTTS--------------------------------------CHHHHHHHHHHH
T ss_pred cccccceeEEecccc---------ccccCC--------------------------------------CHHHHHHHHHHH
Confidence 5799999888 333310 111222235667
Q ss_pred cCCcEEEecC--ceEEEcCeEEee----CC----cEEeccEEEEccCCCCCC--cccccCCCCccCCCCCcCCCCCCCcc
Q 016519 285 KSGQIQVLPG--IESIRGNEVIFE----NG----HSHHFDSIVFCTGFKRST--NVWLKGDDSMLNDDGIPKQSYPNHWK 352 (388)
Q Consensus 285 ~~~~v~~~~~--v~~~~~~~v~~~----~g----~~~~~D~vi~atG~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~ 352 (388)
++.+|+++.+ |++++++.+.+. || +++++|+||||+|.+||. ..+........+.+|++.||+.++.+
T Consensus 283 ~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~ 362 (502)
T 4g6h_A 283 ENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVK 362 (502)
T ss_dssp HHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBT
T ss_pred HhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccC
Confidence 7889999999 999998876553 44 368999999999999984 23333443345678899999655556
Q ss_pred CCCceEEEeccccC-----cccchhhHHHHHHHhhhc
Q 016519 353 GKNGLYCVGLSRKG-----LYGAAADAQNIADHINSI 384 (388)
Q Consensus 353 ~~~~vy~~Gd~~~~-----~~~a~~~~~~~a~~i~~~ 384 (388)
+.|||||+|||+.. ...|++||+.+|+||.+.
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 89999999999764 238999999999999653
No 79
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.97 E-value=1.2e-30 Score=257.35 Aligned_cols=303 Identities=15% Similarity=0.202 Sum_probs=191.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeec-C-------CCCcccc-cCCcCceeeecCC-------ccccCCCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERE-N-------CYASIWK-KYSYDRLRLHLAK-------QFCQLPHLP 69 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~-~-------~~gg~~~-~~~~~~~~~~~~~-------~~~~~~~~~ 69 (388)
..+||+||||||+|+++|..|++.|++|+|||+. + .+||.|. ..+++...+.... ....+ ...
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~-g~~ 184 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF-GWS 184 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC-Ccc
Confidence 4589999999999999999999999999999973 2 2566543 2222221111000 00000 011
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHh-----------cCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEee
Q 016519 70 FPSSYPMFVSRAQFIEYLDHYVSH-----------FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSG 138 (388)
Q Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 138 (388)
.+.. ....+..++.++++.+++. .++.. .......++ . ....+.+.++ +. .+++|
T Consensus 185 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~---~~~~~~~~~--~--~~v~v~~~~g----~~--~~~~~ 250 (598)
T 2x8g_A 185 LDRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTY---LNAKGRLIS--P--HEVQITDKNQ----KV--STITG 250 (598)
T ss_dssp CCGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE---ECSEEEEEE--T--TEEEEECTTC----CE--EEEEE
T ss_pred ccCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEE---EEEEEEEcC--C--CEEEEEeCCC----Ce--EEEEe
Confidence 1110 0123556666666554433 23332 222222222 1 2333443333 11 57999
Q ss_pred CEEEEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEec
Q 016519 139 RFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (388)
Q Consensus 139 d~li~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~ 218 (388)
|+||+||| ++|..|+++|.+.+ .++..+..... ..+++++|||+|.+|+|+|..|++.|.+|++++|+
T Consensus 251 d~lviAtG--s~p~~p~i~G~~~~---------~~~~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 251 NKIILATG--ERPKYPEIPGAVEY---------GITSDDLFSLP-YFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp EEEEECCC--EEECCCSSTTHHHH---------CEEHHHHTTCS-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEeCC--CCCCCCCCCCcccc---------eEcHHHHhhCc-cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 99999999 68999999987644 23443333322 34678999999999999999999999999999987
Q ss_pred chhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ce
Q 016519 219 PMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IE 296 (388)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~ 296 (388)
..+ +.++....+. +.+.+++.+|+++.+ +.
T Consensus 319 ~~l-------~~~d~~~~~~-----------------------------------------~~~~l~~~gv~i~~~~~v~ 350 (598)
T 2x8g_A 319 ILL-------RGFDQQMAEK-----------------------------------------VGDYMENHGVKFAKLCVPD 350 (598)
T ss_dssp CSS-------TTSCHHHHHH-----------------------------------------HHHHHHHTTCEEEETEEEE
T ss_pred cCc-------CcCCHHHHHH-----------------------------------------HHHHHHhCCCEEEECCeEE
Confidence 421 1122222111 134455567777766 44
Q ss_pred EEE--------c---CeEE----eeCCcEEe--ccEEEEccCCCCCCccc-ccCCCCccCCCCCcCCCCCCCccCCCceE
Q 016519 297 SIR--------G---NEVI----FENGHSHH--FDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLY 358 (388)
Q Consensus 297 ~~~--------~---~~v~----~~~g~~~~--~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy 358 (388)
++. . +.+. ..+|++++ +|.||+|+|++||+..+ +.......+++|++.+| +.++++.|+||
T Consensus 351 ~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~ts~~~Vy 429 (598)
T 2x8g_A 351 EIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCT-DDEQTTVSNVY 429 (598)
T ss_dssp EEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCC-TTSBCSSTTEE
T ss_pred EEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeC-CCCcCCCCCEE
Confidence 542 1 2232 34777665 99999999999998544 33442334678999998 45678999999
Q ss_pred EEeccccC----cccchhhHHHHHHHhhhc
Q 016519 359 CVGLSRKG----LYGAAADAQNIADHINSI 384 (388)
Q Consensus 359 ~~Gd~~~~----~~~a~~~~~~~a~~i~~~ 384 (388)
|+|||+.+ ...|..+|+.+|.+|...
T Consensus 430 A~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 430 AIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp ECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred EEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 99999543 337899999999999864
No 80
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=1.9e-30 Score=246.37 Aligned_cols=289 Identities=13% Similarity=0.167 Sum_probs=198.2
Q ss_pred CCeEEEECCChHHHHHHHHHhh---cCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~---~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (388)
.+||+|||||++|+++|..|++ .|++|+|||+.+..... + .+ +.........+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~-------------~-~~--------~~~~~g~~~~~~~ 61 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFV-------------P-SN--------PWVGVGWKERDDI 61 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECG-------------G-GH--------HHHHHTSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCccc-------------C-Cc--------cccccCccCHHHH
Confidence 3699999999999999999999 79999999998743210 0 00 0000122344556
Q ss_pred HHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 016519 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (388)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~ 163 (388)
...+..++++.+++. ...+|+.++... . +|.+.++ .++.||+||+||| ++|..|.++|.+..
T Consensus 62 ~~~l~~~~~~~gv~~---~~~~v~~id~~~--~--~V~~~~g--------~~i~~d~lviAtG--~~~~~~~ipG~~~~- 123 (437)
T 3sx6_A 62 AFPIRHYVERKGIHF---IAQSAEQIDAEA--Q--NITLADG--------NTVHYDYLMIATG--PKLAFENVPGSDPH- 123 (437)
T ss_dssp EEECHHHHHTTTCEE---ECSCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--CEECGGGSTTCSTT-
T ss_pred HHHHHHHHHHCCCEE---EEeEEEEEEcCC--C--EEEECCC--------CEEECCEEEECCC--CCcCcccCCCCCcc-
Confidence 666677777778774 457888887643 3 4777765 6799999999999 68888888887643
Q ss_pred ccCCCCcceeeccCCCCCCC--------CCCCeEEEECCCCCH------HHHHHHH----HhhcCe-----eEEEEecch
Q 016519 164 SSATGTGEVIHSTQYKNGKP--------YGGKNVLVVGSGNSG------MEIALDL----ANHAAK-----TSLVIRSPM 220 (388)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~--------~~~~~v~VvG~G~~a------~e~a~~l----~~~~~~-----v~~~~r~~~ 220 (388)
.++..+.....+... ..+++++|||+|.+| +|+|..+ .+.|.+ |+++++.+.
T Consensus 124 -----~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~ 198 (437)
T 3sx6_A 124 -----EGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPY 198 (437)
T ss_dssp -----TSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSS
T ss_pred -----cCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCcc
Confidence 233333332221100 114567899986654 8888444 455553 999998882
Q ss_pred hhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEE
Q 016519 221 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 298 (388)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~ 298 (388)
+.. . .++. .+.....+.+.+++.+|+++.+ |+++
T Consensus 199 ~~~--~---~l~~---------------------------------------~~~~~~~~~~~l~~~gI~~~~~~~v~~v 234 (437)
T 3sx6_A 199 IGH--L---GIQG---------------------------------------VGDSKGILTKGLKEEGIEAYTNCKVTKV 234 (437)
T ss_dssp TTC--T---TTTC---------------------------------------CTTHHHHHHHHHHHTTCEEECSEEEEEE
T ss_pred ccc--c---ccCc---------------------------------------chHHHHHHHHHHHHCCCEEEcCCEEEEE
Confidence 100 0 0000 0111222346677789999998 9999
Q ss_pred EcCeEEeeC---------CcEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC---
Q 016519 299 RGNEVIFEN---------GHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG--- 366 (388)
Q Consensus 299 ~~~~v~~~~---------g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~--- 366 (388)
+.+.+.+.+ ++++++|++++|+|+.++. .+.... .+.+++|++.+|+..+.++.|||||+|||+..
T Consensus 235 ~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~-~~~~~~-gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~ 312 (437)
T 3sx6_A 235 EDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVP-AVAGVE-GLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPV 312 (437)
T ss_dssp ETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCH-HHHTST-TTBCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCS
T ss_pred ECCeEEEEecccCCccccceEEEEeEEEEcCCCcCch-hhhccc-cccCCCCcEEeChhccCCCCCCEEEEEEEeccCCc
Confidence 998887765 6789999999999999864 333323 45678999999965444489999999999763
Q ss_pred ------------cccchhhHHHHHHHhhhccC
Q 016519 367 ------------LYGAAADAQNIADHINSILS 386 (388)
Q Consensus 367 ------------~~~a~~~~~~~a~~i~~~l~ 386 (388)
...|..||+.+|.||.+.|.
T Consensus 313 ~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~ 344 (437)
T 3sx6_A 313 ETTPVPTGAPKTGYMIESMVSAAVHNIKADLE 344 (437)
T ss_dssp CCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 22799999999999998774
No 81
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=1e-30 Score=246.30 Aligned_cols=285 Identities=14% Similarity=0.140 Sum_probs=194.5
Q ss_pred CeEEEECCChHHHHHHHHHhh---cCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~---~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
+||+|||||++|+++|..|++ .|++|+|||+++..+.... . + .........+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~---~--------------~-----~~~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA---L--------------P-----HVAIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS---S--------------C-----CCCSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc---h--------------h-----hcccCCcCHHHHH
Confidence 489999999999999999999 8999999999884421100 0 0 0001112223334
Q ss_pred HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
.++.+.+++.+++. +.+ +|+.++..+ . .|.+.++.. +. .++.||+||+||| ++|..|.++|.+..
T Consensus 60 ~~~~~~~~~~gv~~--~~~-~v~~i~~~~--~--~V~~~~g~~--~~--~~~~~d~lViAtG--~~~~~~~ipG~~~~-- 124 (409)
T 3h8l_A 60 VDLSEALPEKGIQF--QEG-TVEKIDAKS--S--MVYYTKPDG--SM--AEEEYDYVIVGIG--AHLATELVKGWDKY-- 124 (409)
T ss_dssp EEHHHHTGGGTCEE--EEC-EEEEEETTT--T--EEEEECTTS--CE--EEEECSEEEECCC--CEECGGGSBTHHHH--
T ss_pred HHHHHHHhhCCeEE--EEe-eEEEEeCCC--C--EEEEccCCc--cc--ceeeCCEEEECCC--CCcCccCCCChhhc--
Confidence 45566667778775 555 888887644 3 355555421 11 5699999999999 58888888887643
Q ss_pred cCCCCcceeeccCCCCCCCCC------CCeEEEECCC-------------------C------CHHHHHHHH----Hhhc
Q 016519 165 SATGTGEVIHSTQYKNGKPYG------GKNVLVVGSG-------------------N------SGMEIALDL----ANHA 209 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~------~~~v~VvG~G-------------------~------~a~e~a~~l----~~~~ 209 (388)
..+.....+..... .++++|||+| . .++|+|..+ .+.|
T Consensus 125 -------~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g 197 (409)
T 3h8l_A 125 -------GYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKG 197 (409)
T ss_dssp -------CEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTT
T ss_pred -------CcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcC
Confidence 23333222111111 2567899999 2 367877544 4556
Q ss_pred ----CeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhc
Q 016519 210 ----AKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIK 285 (388)
Q Consensus 210 ----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (388)
.+|+++++.+.+ ..++..+ ...+.+.++
T Consensus 198 ~~~~~~v~~~~~~~~l-------~~~~~~~-----------------------------------------~~~~~~~l~ 229 (409)
T 3h8l_A 198 MLDKVHVTVFSPGEYL-------SDLSPNS-----------------------------------------RKAVASIYN 229 (409)
T ss_dssp CTTTEEEEEECSSSSS-------TTBCHHH-----------------------------------------HHHHHHHHH
T ss_pred CCCCeEEEEEeCCccc-------cccCHHH-----------------------------------------HHHHHHHHH
Confidence 379999987621 1111111 122245566
Q ss_pred CCcEEEecC--ceEEEcCeEEeeCCcEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEecc
Q 016519 286 SGQIQVLPG--IESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLS 363 (388)
Q Consensus 286 ~~~v~~~~~--v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~ 363 (388)
+.+|+++.+ |++++.+.+++++|+++++|+||+|+|+.|+. .+......+.+++|++.+++..+.++.||||++|||
T Consensus 230 ~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~-~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~ 308 (409)
T 3h8l_A 230 QLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNP-ALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDA 308 (409)
T ss_dssp HHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCH-HHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGG
T ss_pred HCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccH-HHHhccccCcCCCCCEEeCcccccCCCCCEEEeehh
Confidence 678999987 99999999999999999999999999999974 333331234577899999964444489999999999
Q ss_pred ccC-----cccchhhHHHHHHHhhhcc
Q 016519 364 RKG-----LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 364 ~~~-----~~~a~~~~~~~a~~i~~~l 385 (388)
+.. ...|..||+.+|++|.+.+
T Consensus 309 ~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 309 NSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp BTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 862 3479999999999999887
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=7.6e-30 Score=242.34 Aligned_cols=298 Identities=16% Similarity=0.122 Sum_probs=190.1
Q ss_pred CCeEEEECCChHHHHHHHHHhh-c------CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSL-Q------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVS 79 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~-~------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (388)
++||+||||||+|+++|..|++ . +++|+|||+.+.++|.|..... +.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCCCC
Confidence 4799999999999999999999 7 9999999999888887753211 22344
Q ss_pred HHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCc
Q 016519 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGL 159 (388)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~ 159 (388)
..++..++..++++.+++. +.+..+ . .. |.+.+ .++.||+||+|||+ ..|..+.++|.
T Consensus 60 ~~~~~~~~~~~~~~~~v~~--~~~v~v------~--~~--v~~~~---------~~~~~d~lViAtG~-~~~~~~~ipG~ 117 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRFRF--FGNVVV------G--EH--VQPGE---------LSERYDAVIYAVGA-QSDRMLNIPGE 117 (456)
T ss_dssp GGGGHHHHHHHHTSTTEEE--EESCCB------T--TT--BCHHH---------HHHHSSEEEECCCC-CEECCCCCTTT
T ss_pred HHHHHHHHHHHHhcCCCEE--EeeEEE------C--CE--EEECC---------CeEeCCEEEEeeCC-CCCCCCCCCCC
Confidence 5567778888777777664 555332 1 11 33333 35789999999995 23677778887
Q ss_pred ccccccCCCCcceeeccCC-----------CCCCCCCCCeEEEECCCCCHHHHHHHHHhh--------------------
Q 016519 160 SSFCSSATGTGEVIHSTQY-----------KNGKPYGGKNVLVVGSGNSGMEIALDLANH-------------------- 208 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~-------------------- 208 (388)
+ + . .+++..++ .+...+.+++++|||+|++|+|+|..|++.
T Consensus 118 ~-~------~-gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~ 189 (456)
T 1lqt_A 118 D-L------P-GSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPR 189 (456)
T ss_dssp T-S------T-TEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTC
T ss_pred C-C------C-CcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHC
Confidence 5 2 2 23443322 222234689999999999999999999974
Q ss_pred c-CeeEEEEecchhhh--hHH-H--hhcCC--------hhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcc
Q 016519 209 A-AKTSLVIRSPMVYL--GLV-L--LRYVP--------CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYP 274 (388)
Q Consensus 209 ~-~~v~~~~r~~~~~~--~~~-~--~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (388)
+ .+|+++.|++.+.. ... + +..+| ..+.+....... .+.....
T Consensus 190 g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~ 246 (456)
T 1lqt_A 190 GIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAA-----------------------AVGKVCK 246 (456)
T ss_dssp CCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHH-----------------------HHCHHHH
T ss_pred CCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhh-----------------------hccHHHH
Confidence 4 58999999984311 100 0 00011 000000000000 0000000
Q ss_pred eeCcchhhhhcC------CcEEEecC--ceEEEcC----eEEee----------------CC--cEEeccEEEEccCCCC
Q 016519 275 VIDAGTCEKIKS------GQIQVLPG--IESIRGN----EVIFE----------------NG--HSHHFDSIVFCTGFKR 324 (388)
Q Consensus 275 ~~~~~~~~~~~~------~~v~~~~~--v~~~~~~----~v~~~----------------~g--~~~~~D~vi~atG~~~ 324 (388)
.....+.+.+.+ .+|+++.+ +.++..+ ++.+. +| ++++||+||+|+|++|
T Consensus 247 ~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 247 QNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 000011122222 57888877 7777653 25553 34 4689999999999999
Q ss_pred CCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHhhhcc
Q 016519 325 STNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i~~~l 385 (388)
++ + .. ...++.|++.+|+..+.++.|+||++|||+++ +..|+.+|..+|.+|...+
T Consensus 327 ~~--l-~g--l~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l 386 (456)
T 1lqt_A 327 VP--T-PG--LPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNL 386 (456)
T ss_dssp CC--C-TT--SCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHH
T ss_pred CC--C-CC--CcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 87 2 22 23466788888855444789999999999764 2358899999999998764
No 83
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.96 E-value=1.7e-29 Score=240.17 Aligned_cols=296 Identities=15% Similarity=0.107 Sum_probs=187.6
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcC--CCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (388)
..+||+||||||+|+++|..|++.| ++|+|||+.+.++|.|..... +.++...++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~ 61 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNV 61 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHH
Confidence 4589999999999999999999998 999999999988887754321 122333566
Q ss_pred HHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC-CCCCCCCcccc
Q 016519 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP-FTPDIRGLSSF 162 (388)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p-~~~~~~g~~~~ 162 (388)
..++..++++.+++. +.++.+. .. |.+.+ .++.||+||+|||+ .| ..|+++|.+..
T Consensus 62 ~~~~~~~~~~~gv~~--~~~~~v~--------~~--V~~~~---------~~~~~d~lVlAtGs--~~~~~~~ipG~~~~ 118 (460)
T 1cjc_A 62 INTFTQTARSDRCAF--YGNVEVG--------RD--VTVQE---------LQDAYHAVVLSYGA--EDHQALDIPGEELP 118 (460)
T ss_dssp HHHHHHHHTSTTEEE--EBSCCBT--------TT--BCHHH---------HHHHSSEEEECCCC--CEECCCCCTTTTST
T ss_pred HHHHHHHHHhCCcEE--EeeeEEe--------eE--EEecc---------ceEEcCEEEEecCc--CCCCCCCCCCCCCC
Confidence 777888888777665 6665541 11 33332 34689999999995 54 67888887521
Q ss_pred cccCCCCcceeeccCC----------CCCC-CCCCCeEEEECCCCCHHHHHHHHH--------------------hhcC-
Q 016519 163 CSSATGTGEVIHSTQY----------KNGK-PYGGKNVLVVGSGNSGMEIALDLA--------------------NHAA- 210 (388)
Q Consensus 163 ~~~~~~~~~~~~~~~~----------~~~~-~~~~~~v~VvG~G~~a~e~a~~l~--------------------~~~~- 210 (388)
.+++..++ .... .+.+++++|||+|.+|+|+|..|+ +.+.
T Consensus 119 --------gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~ 190 (460)
T 1cjc_A 119 --------GVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVK 190 (460)
T ss_dssp --------TEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCC
T ss_pred --------cEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCc
Confidence 23443322 1111 235899999999999999999999 4565
Q ss_pred eeEEEEecchhhh--hHH-H--hhcCCh--------hhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeC
Q 016519 211 KTSLVIRSPMVYL--GLV-L--LRYVPC--------GGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVID 277 (388)
Q Consensus 211 ~v~~~~r~~~~~~--~~~-~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (388)
+|+++.|++.+.. ... + +..+|. .+.. ....+ +..... .+ ...
T Consensus 191 ~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~-~~~~~---------------~~~~~~-~~-------~~~ 246 (460)
T 1cjc_A 191 TVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLG-LQDRI---------------KEAARP-RK-------RLM 246 (460)
T ss_dssp EEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTT-HHHHT---------------TTSCHH-HH-------HHH
T ss_pred EEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcc-hhhhh---------------hhccHH-HH-------HHH
Confidence 7999999984311 000 0 000110 0000 00000 000000 00 000
Q ss_pred cchhhhh--------------cCCcEEEecC--ceEEEcC-------eEEee---------------CC--cEEeccEEE
Q 016519 278 AGTCEKI--------------KSGQIQVLPG--IESIRGN-------EVIFE---------------NG--HSHHFDSIV 317 (388)
Q Consensus 278 ~~~~~~~--------------~~~~v~~~~~--v~~~~~~-------~v~~~---------------~g--~~~~~D~vi 317 (388)
+.+.+.+ ...+|+++.+ +.++..+ ++.+. +| +++++|+||
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi 326 (460)
T 1cjc_A 247 ELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVL 326 (460)
T ss_dssp HHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEE
T ss_pred HHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEE
Confidence 0001111 1267888877 6666532 24442 34 578999999
Q ss_pred EccCCCCCCcccccCCCC-ccCCCCCcCCCCCCCccC-CCceEEEeccccCc----ccchhhHHHHHHHhhhcc
Q 016519 318 FCTGFKRSTNVWLKGDDS-MLNDDGIPKQSYPNHWKG-KNGLYCVGLSRKGL----YGAAADAQNIADHINSIL 385 (388)
Q Consensus 318 ~atG~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~-~~~vy~~Gd~~~~~----~~a~~~~~~~a~~i~~~l 385 (388)
+|+|++|++ + ... ..++.|.+.+| +.++++ .|+|||+|||++++ ..|+.+|..+|.+|...+
T Consensus 327 ~a~G~~p~~--l---~gl~~~d~~g~i~vn-~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l 394 (460)
T 1cjc_A 327 SSIGYKSRP--I---DPSVPFDPKLGVVPN-MEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDL 394 (460)
T ss_dssp ECCCEECCC--C---CTTSCCBTTTTBCCE-ETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCC--C---CCCcccccCCCeeEC-CCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999987 2 212 35667888888 445666 79999999998643 369999999999998765
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=3.5e-30 Score=257.35 Aligned_cols=269 Identities=16% Similarity=0.165 Sum_probs=196.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
.++||+|||||++|+++|..|+++|++|+|||+.+.+||.|.... .++.+.....+..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~----------------------~~p~~~~~~~~~~ 447 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES----------------------ALPGLSAWGRVKE 447 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH----------------------TSTTCGGGGHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc----------------------CCCchhHHHHHHH
Confidence 468999999999999999999999999999999999988765210 1122334567788
Q ss_pred HHHHHHHhc-CCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC------CCCCCCCC
Q 016519 86 YLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN------PFTPDIRG 158 (388)
Q Consensus 86 ~l~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~------p~~~~~~g 158 (388)
++...++++ ++++ ++++.+ ...+. .++.+|+||+|||...+ |..|.++|
T Consensus 448 ~~~~~~~~~~gv~~--~~~~~v--------------~~~~~--------~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G 503 (690)
T 3k30_A 448 YREAVLAELPNVEI--YRESPM--------------TGDDI--------VEFGFEHVITATGATWRTDGVARFHTTALPI 503 (690)
T ss_dssp HHHHHHHTCTTEEE--ESSCCC--------------CHHHH--------HHTTCCEEEECCCEEECSSCCSSSCSSCCCB
T ss_pred HHHHHHHHcCCCEE--EECCee--------------cHHHH--------hhcCCCEEEEcCCCccccccccccCCCCCCC
Confidence 888888776 6554 555432 11221 46789999999995322 55677777
Q ss_pred cccccccCCCCcceeeccCCCCCCCCCCCeEEEEC--CCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhH
Q 016519 159 LSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGV 236 (388)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG--~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~ 236 (388)
.+. ..+++..++.......+++++||| +|.+|+|+|..|.+.|.+|+++++.+.+ ++...
T Consensus 504 ~~~--------~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l---------~~~~~- 565 (690)
T 3k30_A 504 AEG--------MQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV---------SSWTN- 565 (690)
T ss_dssp CTT--------SEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST---------TGGGG-
T ss_pred CCC--------CcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc---------ccccc-
Confidence 653 256666665555555688999999 9999999999999999999999998822 11100
Q ss_pred HHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEEee-----CCc
Q 016519 237 DTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFE-----NGH 309 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~-----~g~ 309 (388)
.+.....+.+.+++.+|+++.+ |.+++.+++.+. +++
T Consensus 566 ------------------------------------~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~ 609 (690)
T 3k30_A 566 ------------------------------------NTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIER 609 (690)
T ss_dssp ------------------------------------GGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEE
T ss_pred ------------------------------------cchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEE
Confidence 0111122346677789999988 999998876554 456
Q ss_pred EEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC--cccchhhHHHHHHHhhhccCC
Q 016519 310 SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG--LYGAAADAQNIADHINSILSP 387 (388)
Q Consensus 310 ~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~--~~~a~~~~~~~a~~i~~~l~~ 387 (388)
++++|.||+|+|++|++ .+..++.. .+. .++.|+||++|||+.. +..|+.+|+.+|.+|.+.+..
T Consensus 610 ~i~aD~VV~A~G~~p~~-~l~~~l~~----~~~--------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~g 676 (690)
T 3k30_A 610 ELECDAVVMVTARLPRE-ELYLDLVA----RRD--------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPS 676 (690)
T ss_dssp EEECSEEEEESCEEECC-HHHHHHHH----HHH--------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCCC
T ss_pred EEECCEEEECCCCCCCh-HHHHHHhh----hhc--------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhccC
Confidence 89999999999999998 44333211 111 5678999999999874 447999999999999988643
No 85
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.96 E-value=2.1e-30 Score=249.28 Aligned_cols=303 Identities=13% Similarity=0.133 Sum_probs=188.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccc--cC-CcCceeeecCCccccCCCCCCCC------CC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWK--KY-SYDRLRLHLAKQFCQLPHLPFPS------SY 74 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~------~~ 74 (388)
..+||+|||||++|+++|..|++. +.+|+|||+++.++.... .. .+....... .....+..++... ..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNV-TKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTH-HHHCEEECTTSCEEESBSSCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccch-hhcccccccccccccccccch
Confidence 358999999999999999999887 889999999876542110 00 000000000 0000000000000 00
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 75 PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
..|.....+. . .++.+++. +.+++|+.++... ++|.+.++ .++.||+||+||| ++|..|
T Consensus 89 ~~~~~~~~l~----~-~~~~gv~~--~~g~~v~~id~~~----~~V~~~~g--------~~i~yd~lviATG--s~p~~~ 147 (493)
T 1m6i_A 89 SFYVSAQDLP----H-IENGGVAV--LTGKKVVQLDVRD----NMVKLNDG--------SQITYEKCLIATG--GTPRSL 147 (493)
T ss_dssp GGSBCTTTTT----T-STTCEEEE--EETCCEEEEEGGG----TEEEETTS--------CEEEEEEEEECCC--EEECCC
T ss_pred Hhhcchhhhh----h-hhcCCeEE--EcCCEEEEEECCC----CEEEECCC--------CEEECCEEEECCC--CCCCCC
Confidence 0011111110 0 12234444 7888999888643 35777765 6899999999999 678776
Q ss_pred CCCCcc--cccccCCCCcceeeccCCCC---C--CCCCCCeEEEECCCCCHHHHHHHHHh----hcCeeEEEEecchhhh
Q 016519 155 DIRGLS--SFCSSATGTGEVIHSTQYKN---G--KPYGGKNVLVVGSGNSGMEIALDLAN----HAAKTSLVIRSPMVYL 223 (388)
Q Consensus 155 ~~~g~~--~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~v~VvG~G~~a~e~a~~l~~----~~~~v~~~~r~~~~~~ 223 (388)
++++.. .+ ...+.+.....+ . ....+++++|||+|.+|+|+|..|++ .|.+|+++.+.+.+
T Consensus 148 ~~~~~~~~~~------~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~-- 219 (493)
T 1m6i_A 148 SAIDRAGAEV------KSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN-- 219 (493)
T ss_dssp HHHHTSCHHH------HHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST--
T ss_pred CCcccccccc------cCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc--
Confidence 654321 11 111222221111 0 11237899999999999999999987 46789999887611
Q ss_pred hHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc-
Q 016519 224 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG- 300 (388)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~- 300 (388)
+.+.+|..+.. .+.+.+++.+|+++.+ |.+++.
T Consensus 220 ---~~~~l~~~~~~-----------------------------------------~~~~~l~~~GV~v~~~~~V~~i~~~ 255 (493)
T 1m6i_A 220 ---MGKILPEYLSN-----------------------------------------WTMEKVRREGVKVMPNAIVQSVGVS 255 (493)
T ss_dssp ---TTTTSCHHHHH-----------------------------------------HHHHHHHTTTCEEECSCCEEEEEEE
T ss_pred ---ccccCCHHHHH-----------------------------------------HHHHHHHhcCCEEEeCCEEEEEEec
Confidence 11223322221 1245667789999988 888863
Q ss_pred -C--eEEeeCCcEEeccEEEEccCCCCCCcccccCCCCccCC-CCCcCCCCCCCccCCCceEEEeccccC----------
Q 016519 301 -N--EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLND-DGIPKQSYPNHWKGKNGLYCVGLSRKG---------- 366 (388)
Q Consensus 301 -~--~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~vy~~Gd~~~~---------- 366 (388)
+ .+.+.+|+++++|.||+|+|++||+ .++.......++ +|.+.+|.. +++ .|+|||+|||+..
T Consensus 256 ~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~-~l~~~~gl~~~~~~ggi~Vd~~-l~t-~~~IyA~GD~a~~~~~~~g~~~~ 332 (493)
T 1m6i_A 256 SGKLLIKLKDGRKVETDHIVAAVGLEPNV-ELAKTGGLEIDSDFGGFRVNAE-LQA-RSNIWVAGDAACFYDIKLGRRRV 332 (493)
T ss_dssp TTEEEEEETTSCEEEESEEEECCCEEECC-TTHHHHTCCBCTTTCSEECCTT-CEE-ETTEEECGGGEEEEETTTEEECC
T ss_pred CCeEEEEECCCCEEECCEEEECCCCCccH-HHHHHcCCccccCCCcEEECCC-ccc-CCCeeEeeeeEeccCcccCcccc
Confidence 2 3677899999999999999999998 455444222343 578888844 455 5999999999763
Q ss_pred --cccchhhHHHHHHHhhhcc
Q 016519 367 --LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 367 --~~~a~~~~~~~a~~i~~~l 385 (388)
...|..||+.+|.+|....
T Consensus 333 ~~~~~A~~qg~~aa~ni~g~~ 353 (493)
T 1m6i_A 333 EHHDHAVVSGRLAGENMTGAA 353 (493)
T ss_dssp CCHHHHHHHHHHHHHHHTSCC
T ss_pred chHHHHHHHHHHHHHHhcCCC
Confidence 1279999999999998653
No 86
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.95 E-value=1.8e-28 Score=253.93 Aligned_cols=277 Identities=16% Similarity=0.189 Sum_probs=183.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
.+||+||||||+|+++|..|+++|+ +|+|||+.+.+||.+... .+. |....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~---------------ip~---------~~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE---------------IPQ---------FRLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT---------------SCT---------TTSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc---------------CCc---------ccCCHHHHH
Confidence 5799999999999999999999999 799999998888865321 111 111234556
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCC-CCcccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDI-RGLSSFCS 164 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~-~g~~~~~~ 164 (388)
+..+.+++.++++ +.++.+.. .. +++.++ .++.||+||+|||+ ..|..+++ +|.+..
T Consensus 243 ~~~~~~~~~gv~~--~~~~~v~~-------~~--v~~~~~--------~~~~~d~vvlAtGa-~~p~~l~~~~G~~~~-- 300 (1025)
T 1gte_A 243 FEIELMKDLGVKI--ICGKSLSE-------NE--ITLNTL--------KEEGYKAAFIGIGL-PEPKTDDIFQGLTQD-- 300 (1025)
T ss_dssp HHHHHHHTTTCEE--EESCCBST-------TS--BCHHHH--------HHTTCCEEEECCCC-CEECCCGGGTTCCTT--
T ss_pred HHHHHHHHCCcEE--EcccEecc-------ce--EEhhhc--------CccCCCEEEEecCC-CCCCCCCCCCCCCCC--
Confidence 6666777778776 67665511 11 333332 35789999999995 24665543 344321
Q ss_pred cCCCCcceeeccCCC--------------CC-CCCCCCeEEEECCCCCHHHHHHHHHhhcC-eeEEEEecchhhhhHHHh
Q 016519 165 SATGTGEVIHSTQYK--------------NG-KPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSPMVYLGLVLL 228 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~--------------~~-~~~~~~~v~VvG~G~~a~e~a~~l~~~~~-~v~~~~r~~~~~~~~~~~ 228 (388)
..+++..++. .. ....+++|+|||+|.+|+|+|..+.+.|. +|++++|++.
T Consensus 301 -----~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~-------- 367 (1025)
T 1gte_A 301 -----QGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF-------- 367 (1025)
T ss_dssp -----TTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG--------
T ss_pred -----CCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh--------
Confidence 1233322111 11 12236799999999999999999999996 8999999871
Q ss_pred hcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc--Ce--
Q 016519 229 RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NE-- 302 (388)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~-- 302 (388)
..++.. ... .+.+++.+|+++.+ +.++.. +.
T Consensus 368 ~~~~~~-~~e------------------------------------------~~~~~~~Gv~~~~~~~~~~i~~~~g~v~ 404 (1025)
T 1gte_A 368 VNIRAV-PEE------------------------------------------VELAKEEKCEFLPFLSPRKVIVKGGRIV 404 (1025)
T ss_dssp GGCCSC-HHH------------------------------------------HHHHHHTTCEEECSEEEEEEEEETTEEE
T ss_pred hhCCCC-HHH------------------------------------------HHHHHHcCCEEEeCCCceEEEccCCeEE
Confidence 011100 000 11223345555544 344331 11
Q ss_pred -EEee-------------CC--cEEeccEEEEccCCCCCCcccccCC-CCccCCCCCcCCCCCCCccCCCceEEEecccc
Q 016519 303 -VIFE-------------NG--HSHHFDSIVFCTGFKRSTNVWLKGD-DSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK 365 (388)
Q Consensus 303 -v~~~-------------~g--~~~~~D~vi~atG~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~ 365 (388)
+.+. +| +++++|.||+|+|++|+...+..+. ....+++|++.+|+..++|+.|+|||+||+++
T Consensus 405 ~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~ 484 (1025)
T 1gte_A 405 AVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVG 484 (1025)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGC
T ss_pred EEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCC
Confidence 2221 12 3689999999999997654665543 23346789999996578899999999999988
Q ss_pred C---cccchhhHHHHHHHhhhcc
Q 016519 366 G---LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 366 ~---~~~a~~~~~~~a~~i~~~l 385 (388)
+ +..|+.+|+.+|.+|.+.|
T Consensus 485 ~~~~~~~A~~~G~~aA~~i~~~L 507 (1025)
T 1gte_A 485 MANTTVESVNDGKQASWYIHKYI 507 (1025)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHH
Confidence 5 4489999999999998754
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.95 E-value=9.5e-29 Score=247.88 Aligned_cols=278 Identities=17% Similarity=0.203 Sum_probs=187.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
..+||+||||||+|+++|..|+++|++|+|||+.+.+||.|.... .++.+.....+.+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~----------------------~~pg~~~~~~~~~ 445 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVA----------------------ALPGLGEWSYHRD 445 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHT----------------------TSTTCGGGHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecc----------------------cCCChHHHHHHHH
Confidence 458999999999999999999999999999999998988765311 0111122344555
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC------CCCCCCCCc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN------PFTPDIRGL 159 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~------p~~~~~~g~ 159 (388)
|++..++.+. ..+..++.+.. + . .|++.++ ..+.||+||+|||+... |..|+++|.
T Consensus 446 ~~~~~i~~~~-----~~~~~~v~i~~-~--~--~v~~~~~--------~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~ 507 (729)
T 1o94_A 446 YRETQITKLL-----KKNKESQLALG-Q--K--PMTADDV--------LQYGADKVIIATGARWNTDGTNCLTHDPIPGA 507 (729)
T ss_dssp HHHHHHHHHH-----HHSTTCEEECS-C--C--CCCHHHH--------HTSCCSEEEECCCEEECSSCCCTTTSSCCTTC
T ss_pred HHHHHHHHhh-----cccCCceEEEe-C--e--EEehhhc--------cccCCCEEEEcCCCCcccccccCccCCCCCCc
Confidence 5555444330 00001111111 0 1 1333332 46789999999995321 567788887
Q ss_pred ccccccCCCCcceeeccCCCCCCCCCCCeEEEEC--CCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHH
Q 016519 160 SSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVD 237 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG--~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~ 237 (388)
+.+ ...+++..++.......+++|+||| +|.+|+|+|..|++.|.+|+++++++ +.... .++.
T Consensus 508 ~~~------~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~----~~~~---- 572 (729)
T 1o94_A 508 DAS------LPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYM----HFTL---- 572 (729)
T ss_dssp CTT------STTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHH----HHTT----
T ss_pred ccc------CCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccc----cccc----
Confidence 744 3456666555444444588999999 99999999999999999999999987 21000 0000
Q ss_pred HHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEEee----CC-cE
Q 016519 238 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFE----NG-HS 310 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~----~g-~~ 310 (388)
....+.+.+++.+|+++.+ +.+++.+++.+. ++ ++
T Consensus 573 --------------------------------------~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~ 614 (729)
T 1o94_A 573 --------------------------------------EYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKR 614 (729)
T ss_dssp --------------------------------------CHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCC
T ss_pred --------------------------------------cHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEE
Confidence 0011235566679999988 888887765542 33 33
Q ss_pred ------------------EeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC--cccc
Q 016519 311 ------------------HHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG--LYGA 370 (388)
Q Consensus 311 ------------------~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~--~~~a 370 (388)
+++|.||+|+|++|++ .+..++.. .++ ..++++.|+||++|||+.. +..|
T Consensus 615 ~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~-~l~~~l~~--------~vd-~~~~t~~~~VyAiGD~~~~~~~~~A 684 (729)
T 1o94_A 615 TYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC-TLWNELKA--------RES-EWAENDIKGIYLIGDAEAPRLIADA 684 (729)
T ss_dssp CCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC-HHHHHHHH--------TGG-GTGGGTCCEEEECGGGTSCCCHHHH
T ss_pred ecccccccccccCCcceeeeCCEEEECCCCCCCh-HHHHHHhh--------hcc-cccccCCCCeEEEeCccchhhHHHH
Confidence 8999999999999998 44443311 123 4566888999999999863 4479
Q ss_pred hhhHHHHHHHhhhccC
Q 016519 371 AADAQNIADHINSILS 386 (388)
Q Consensus 371 ~~~~~~~a~~i~~~l~ 386 (388)
+.+|+.+|.+|.+.+.
T Consensus 685 ~~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 685 TFTGHRVAREIEEANP 700 (729)
T ss_dssp HHHHHHHHHTTTSSCT
T ss_pred HHHHHHHHHHhhhhcc
Confidence 9999999999988753
No 88
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=6.7e-28 Score=248.00 Aligned_cols=282 Identities=14% Similarity=0.138 Sum_probs=191.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.+||+||||||+|+++|..|++.|++|+|||+++.+||.|. .+ +.. . .+. ....++...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~-~~-~k~-------~-----------i~~-~~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL-DT-AGE-------Q-----------IDG-MDSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG-GS-SCC-------E-----------ETT-EEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec-cC-Ccc-------c-----------cCC-CCHHHHHHH
Confidence 47999999999999999999999999999999998988776 21 100 0 011 112344444
Q ss_pred HHHHHHhc-CCcceeEeceEEEEEEEeCC-------CCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCC
Q 016519 87 LDHYVSHF-NIVPSIRYQRSVESASYDEA-------TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRG 158 (388)
Q Consensus 87 l~~~~~~~-~~~~~~~~~~~v~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g 158 (388)
+.+.+..+ +++. +.+++|.++..... .+.+.+.+.+....+.. .++.||+||+||| +.|..|+++|
T Consensus 187 ~~~~l~~~~~v~~--~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~--~~i~~d~lVlATG--s~p~~~~ipG 260 (965)
T 2gag_A 187 VTSELAEAEETTH--LQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERI--WHIRAKQVVLATG--AHERPIVFEN 260 (965)
T ss_dssp HHHHHHHSTTEEE--ESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEE--EEEEEEEEEECCC--EEECCCCCBT
T ss_pred HHHHHhhcCCcEE--EeCCEEEeeecCCceeeeEeecccccccccccCCCCce--EEEECCEEEECCC--CccCCCCCCC
Confidence 44444443 6555 78888887763210 01111111100000011 4789999999999 6788888888
Q ss_pred cccccccCCCCcceeeccCC---CC-CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChh
Q 016519 159 LSSFCSSATGTGEVIHSTQY---KN-GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCG 234 (388)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~ 234 (388)
.+.. .+++.... .. .....+++++|||+|.+|+|+|..|++.|.+|+++++++.+ ++.
T Consensus 261 ~~~~--------gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~---------~~~- 322 (965)
T 2gag_A 261 NDRP--------GIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSI---------SAA- 322 (965)
T ss_dssp CCST--------TEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC---------CHH-
T ss_pred CCCC--------CEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc---------chh-
Confidence 7632 34443211 11 12334689999999999999999999999999999998821 110
Q ss_pred hHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc--C----eEEee
Q 016519 235 GVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--N----EVIFE 306 (388)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~----~v~~~ 306 (388)
.+.+++.+|+++.+ +.++.. + .+.+.
T Consensus 323 ----------------------------------------------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~ 356 (965)
T 2gag_A 323 ----------------------------------------------AAQAVADGVQVISGSVVVDTEADENGELSAIVVA 356 (965)
T ss_dssp ----------------------------------------------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEE
T ss_pred ----------------------------------------------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEE
Confidence 13345578888887 777765 2 46665
Q ss_pred C-------C--cEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCC----ccCCCceEEEeccccC--cccch
Q 016519 307 N-------G--HSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNH----WKGKNGLYCVGLSRKG--LYGAA 371 (388)
Q Consensus 307 ~-------g--~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~vy~~Gd~~~~--~~~a~ 371 (388)
+ | +++++|.||+|+|++||+ .+.... .|.+.+++... .++.|+||++|||++. ...|.
T Consensus 357 ~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~-~l~~~~------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~~A~ 429 (965)
T 2gag_A 357 ELDEARELGGTQRFEADVLAVAGGFNPVV-HLHSQR------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTASAL 429 (965)
T ss_dssp EECTTCCEEEEEEEECSEEEEECCEEECC-HHHHHT------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHHHHH
T ss_pred eccccCCCCceEEEEcCEEEECCCcCcCh-HHHHhC------CCcEEEcCcccccccCCCCCCEEEEEecCCchhHHHHH
Confidence 4 5 678999999999999998 343322 45666664333 2788999999999874 34899
Q ss_pred hhHHHHHHHhhhccC
Q 016519 372 ADAQNIADHINSILS 386 (388)
Q Consensus 372 ~~~~~~a~~i~~~l~ 386 (388)
.+|+.+|.+|...+.
T Consensus 430 ~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 430 STGAATGAAAATAAG 444 (965)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999988653
No 89
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.95 E-value=8.6e-29 Score=234.53 Aligned_cols=288 Identities=16% Similarity=0.145 Sum_probs=184.1
Q ss_pred CeEEEECCChHHHHHHHHHhh--cCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
+||+|||||++|+++|..|++ .|++|+|||+++..+...... .. .......+++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~--------------~~--------~~g~~~~~~~~~ 60 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP--------------HL--------AMGWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH--------------HH--------HHTCSCGGGSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcc--------------hh--------ccCccCHHHHHH
Confidence 699999999999999999999 789999999988654211000 00 000011111222
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
.+.+.+++.+++. + ..+|+.++... . .|.+.++ .++.||+||+||| ++|..|.+. ....
T Consensus 61 ~~~~~~~~~gv~~--~-~~~v~~id~~~--~--~v~~~~g--------~~i~~d~liiAtG--~~~~~pg~~-~~g~--- 119 (430)
T 3h28_A 61 PLAPLLPKFNIEF--I-NEKAESIDPDA--N--TVTTQSG--------KKIEYDYLVIATG--PKLVFGAEG-QEEN--- 119 (430)
T ss_dssp ESTTTGGGGTEEE--E-CSCEEEEETTT--T--EEEETTC--------CEEECSEEEECCC--CEEECCSBT-HHHH---
T ss_pred HHHHHHHhcCCEE--E-EEEEEEEECCC--C--EEEECCC--------cEEECCEEEEcCC--cccccCCCC-CcCC---
Confidence 2233445567664 4 45788887543 3 4777664 6799999999999 566655321 1111
Q ss_pred CCCCcceeeccCCCCC-----CCCCCCeEEEECCCCCH------HHHHHHHH----hhc----CeeEEEEecchhhhhHH
Q 016519 166 ATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSG------MEIALDLA----NHA----AKTSLVIRSPMVYLGLV 226 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~~-----~~~~~~~v~VvG~G~~a------~e~a~~l~----~~~----~~v~~~~r~~~~~~~~~ 226 (388)
...+.+..+.... ....+++++|||+|.+| +|+|..++ +.| .+|+++.+.+.+...
T Consensus 120 ---~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~-- 194 (430)
T 3h28_A 120 ---STSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHF-- 194 (430)
T ss_dssp ---SCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCT--
T ss_pred ---ccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCcccccc--
Confidence 0001111111000 00113457899987654 88875554 445 478999887721000
Q ss_pred HhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEE
Q 016519 227 LLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVI 304 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~ 304 (388)
.++. .+.....+.+.+++.+|+++.+ |++++.+.+.
T Consensus 195 ---~l~~---------------------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~ 232 (430)
T 3h28_A 195 ---GVGG---------------------------------------IGASKRLVEDLFAERNIDWIANVAVKAIEPDKVI 232 (430)
T ss_dssp ---TTTC---------------------------------------STTHHHHHHHHHHHTTCEEECSCEEEEECSSEEE
T ss_pred ---ccCc---------------------------------------chHHHHHHHHHHHHCCCEEEeCCEEEEEeCCeEE
Confidence 0000 0111223356677789999988 9999999888
Q ss_pred eeC----CcEEeccEEEEccCCCCCCcccccCCCCccCCCC-CcCCCCCCCccCCCceEEEeccccC-------------
Q 016519 305 FEN----GHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDG-IPKQSYPNHWKGKNGLYCVGLSRKG------------- 366 (388)
Q Consensus 305 ~~~----g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~vy~~Gd~~~~------------- 366 (388)
+++ ++++++|.|++|+|+.++. .+......+.+++| ++.+|+..+.++.|||||+|||+..
T Consensus 233 ~~~~~~~g~~i~~D~vv~a~G~~~~~-~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~p 311 (430)
T 3h28_A 233 YEDLNGNTHEVPAKFTMFMPSFQGPE-VVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVP 311 (430)
T ss_dssp EECTTSCEEEEECSEEEEECEEECCH-HHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCC
T ss_pred EEecCCCceEEeeeEEEECCCCccch-hHhhccccCcCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCC
Confidence 887 7899999999999999864 33322024567889 9999965444489999999999763
Q ss_pred --cccchhhHHHHHHHhhhccC
Q 016519 367 --LYGAAADAQNIADHINSILS 386 (388)
Q Consensus 367 --~~~a~~~~~~~a~~i~~~l~ 386 (388)
...|..||+.+|++|.+.|.
T Consensus 312 k~~~~A~~~g~~aa~ni~~~l~ 333 (430)
T 3h28_A 312 KTGMMIEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHhc
Confidence 23799999999999998774
No 90
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.94 E-value=2.2e-27 Score=236.55 Aligned_cols=282 Identities=17% Similarity=0.174 Sum_probs=181.0
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
..+||+||||||+|+++|..|++.|++|+|||+++.+||.|.... ..+......++..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~----------------------~~~~~~~~~~~~~ 429 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK----------------------QIPGKEEFYETLR 429 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT----------------------TSTTCTTHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc----------------------cCCCHHHHHHHHH
Confidence 458999999999999999999999999999999998888764210 0011122345556
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEE-eeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYY-SGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
++...+++.++++ ++++.|.. ..+ .||+||+||| ++|..|.++|.+..
T Consensus 430 ~~~~~~~~~gv~~--~~~~~v~~-------------------------~~~~~~d~lviAtG--~~p~~~~i~G~~~~-- 478 (671)
T 1ps9_A 430 YYRRMIEVTGVTL--KLNHTVTA-------------------------DQLQAFDETILASG--IVPRTPPIDGIDHP-- 478 (671)
T ss_dssp HHHHHHHHHTCEE--EESCCCCS-------------------------SSSCCSSEEEECCC--EEECCCCCBTTTST--
T ss_pred HHHHHHHHcCCEE--EeCcEecH-------------------------HHhhcCCEEEEccC--CCcCCCCCCCCCCC--
Confidence 6667777777765 66654310 123 7899999999 68988988887632
Q ss_pred cCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc--hhhhhH------HHhhcCChhhH
Q 016519 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP--MVYLGL------VLLRYVPCGGV 236 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~--~~~~~~------~~~~~~~~~~~ 236 (388)
.+++..+........+++|+|||+|.+|+|+|..|++.|.+|++....- .|.... ......|..
T Consensus 479 ------~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~-- 550 (671)
T 1ps9_A 479 ------KVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQI-- 550 (671)
T ss_dssp ------TEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCC--
T ss_pred ------cEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccccccccccccccc--
Confidence 4566655554444568999999999999999999999987765421000 000000 000000000
Q ss_pred HHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEEe-eCC--cEE
Q 016519 237 DTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIF-ENG--HSH 311 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~-~~g--~~~ 311 (388)
.....+..+..+... .+.. ...+.....+.+.+++.+|+++.+ +.+++++++.+ .+| +++
T Consensus 551 -----------~~~~~~v~l~~~~~~-~l~~---~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i 615 (671)
T 1ps9_A 551 -----------PRSPRQIVMLQRKAS-KPGQ---GLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVL 615 (671)
T ss_dssp -----------CCCSSEEEEECSSCS-CTTT---TSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEE
T ss_pred -----------CCCCcEEEEEEecch-hhcc---ccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEE
Confidence 000000000000000 0000 001111222356677889999998 88999888777 687 578
Q ss_pred eccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCCCccCCCceEEEeccccC----cccchhhHHHHHHHh
Q 016519 312 HFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHI 381 (388)
Q Consensus 312 ~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~----~~~a~~~~~~~a~~i 381 (388)
++|.||+|+|++||+ .+...+ . ...++||++|||+.. ...|++||..+|.+|
T Consensus 616 ~~D~Vi~a~G~~p~~-~l~~~l----~-------------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 616 AVDNVVICAGQEPNR-ALAQPL----I-------------DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp CCSEEEECCCEEECC-TTHHHH----H-------------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred eCCEEEECCCccccH-HHHHHH----H-------------hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 999999999999998 443332 0 012589999999764 347999999999886
No 91
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.94 E-value=2.6e-28 Score=230.94 Aligned_cols=293 Identities=17% Similarity=0.199 Sum_probs=174.3
Q ss_pred CeEEEECCChHHHHHHHHHhhcC--CCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
++|+|||||++|+++|..|++.+ ++|+|||+++...-. |. +.... ....+.+++..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~-------------p~-l~~v~--------~g~~~~~~i~~ 60 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------------PA-FPHLA--------MGWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------------GG-HHHHH--------HTCSCGGGSEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccC-------------cc-HHHHh--------cCCCCHHHhhh
Confidence 58999999999999999999875 799999998743210 00 00000 00001111111
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
.++.++++.+++ ....+|++++.+. + +|++.++ .++.||+||+|||+ ++. ++++|.+..+..
T Consensus 61 ~~~~~~~~~gv~---~i~~~v~~Id~~~--~--~V~~~~g--------~~i~YD~LViAtG~--~~~-~~i~G~~e~~~~ 122 (430)
T 3hyw_A 61 PLAPLLPKFNIE---FINEKAESIDPDA--N--TVTTQSG--------KKIEYDYLVIATGP--KLV-FGAEGQEENSTS 122 (430)
T ss_dssp ESTTTGGGGTEE---EECSCEEEEETTT--T--EEEETTC--------CEEECSEEEECCCC--EEE-CCSBTHHHHSCC
T ss_pred cHHHHHHHCCcE---EEEeEEEEEECCC--C--EEEECCC--------CEEECCEEEEeCCC--Ccc-CCccCcccCcCC
Confidence 122334555665 3456788888754 3 3788776 78999999999994 543 457776544211
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEECCCC------CHHHHHHHH----Hhhc----CeeEEEEecchhhhhHHHhhcC
Q 016519 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGN------SGMEIALDL----ANHA----AKTSLVIRSPMVYLGLVLLRYV 231 (388)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~------~a~e~a~~l----~~~~----~~v~~~~r~~~~~~~~~~~~~~ 231 (388)
+++........+... .....+.++|+|++. .+.|++..+ .+.+ .+|+++...+.. ..+
T Consensus 123 ~~~~~~a~~~~~~l~-~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l-------~~~ 194 (430)
T 3hyw_A 123 ICTAEHALETQKKLQ-ELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYL-------GHF 194 (430)
T ss_dssp CSSHHHHHHHHHHHH-HHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSST-------TCT
T ss_pred cccHHHHHHHHHHHH-hhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchh-------hhc
Confidence 111111000000000 001234456666543 123444333 3333 357777655511 000
Q ss_pred ChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcCeEEeeC--
Q 016519 232 PCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFEN-- 307 (388)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~-- 307 (388)
... ..+.....+.+.+++.+|+++.+ |++++.+.+.+.+
T Consensus 195 ~~~-------------------------------------~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~ 237 (430)
T 3hyw_A 195 GVG-------------------------------------GIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLN 237 (430)
T ss_dssp TTT-------------------------------------CSTTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTT
T ss_pred cch-------------------------------------hhHHHHHHHHHHHHhCCeEEEeCceEEEEeCCceEEEeeC
Confidence 000 00111122345677789999998 9999999887765
Q ss_pred --CcEEeccEEEEccCCCCCCcccccCCCCcc-CCCCCcCCCCCCCccCCCceEEEeccccCc---------------cc
Q 016519 308 --GHSHHFDSIVFCTGFKRSTNVWLKGDDSML-NDDGIPKQSYPNHWKGKNGLYCVGLSRKGL---------------YG 369 (388)
Q Consensus 308 --g~~~~~D~vi~atG~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~vy~~Gd~~~~~---------------~~ 369 (388)
++++++|++++++|.+|+. .+......+. +..|++.++...+.+++|||||+|||+..+ ..
T Consensus 238 g~~~~i~~d~vi~~~G~~~~~-~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~ 316 (430)
T 3hyw_A 238 GNTHEVPAKFTMFMPSFQGPE-VVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMM 316 (430)
T ss_dssp SCEEEEECSEEEEECEEECCH-HHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHH
T ss_pred CCceEeecceEEEeccCCCch-HHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHH
Confidence 3578999999999999974 3333222333 445677888555568999999999997531 16
Q ss_pred chhhHHHHHHHhhhccC
Q 016519 370 AAADAQNIADHINSILS 386 (388)
Q Consensus 370 a~~~~~~~a~~i~~~l~ 386 (388)
|.+||+.+|+||.+.+.
T Consensus 317 A~~qg~~~A~Ni~~~l~ 333 (430)
T 3hyw_A 317 IEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 88999999999998764
No 92
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.94 E-value=6.8e-27 Score=219.72 Aligned_cols=284 Identities=17% Similarity=0.165 Sum_probs=180.3
Q ss_pred CeEEEECCChHHHHHHHHHhhcC--CCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
++|+|||||++|+++|.+|++.+ .+|+|||+++....+.... ... ....+.+++..
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~--------------~v~--------~g~~~~~~~~~ 60 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSN--------------EVI--------GGDRELASLRV 60 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHH--------------HHH--------HTSSCGGGGEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHH--------------HHh--------cCCCCHHHHhh
Confidence 68999999999999999999876 5899999987432110000 000 00001111111
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccc
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~ 165 (388)
.++.+ ...+++ ....+|+.++... . +|.+.++ .++.||+||+||| +++..+.++|.+..
T Consensus 61 ~~~~~-~~~gv~---~i~~~v~~id~~~--~--~v~~~~g--------~~i~yd~LviAtG--~~~~~~~i~G~~e~--- 119 (401)
T 3vrd_B 61 GYDGL-RAHGIQ---VVHDSALGIDPDK--K--LVKTAGG--------AEFAYDRCVVAPG--IDLLYDKIEGYSEA--- 119 (401)
T ss_dssp CSHHH-HHTTCE---EECSCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--EEECGGGSBTCCSG---
T ss_pred CHHHH-HHCCCE---EEEeEEEEEEccC--c--EEEeccc--------ceeecceeeeccC--CccccCCccCchhh---
Confidence 11222 234665 4566788888654 3 3777765 7899999999999 68888888887653
Q ss_pred CCCCc-ceeeccCCCC--------CCCCCCCeEEEECCCC-------C----HHHHHHHHHhhc--CeeEEEEecchhhh
Q 016519 166 ATGTG-EVIHSTQYKN--------GKPYGGKNVLVVGSGN-------S----GMEIALDLANHA--AKTSLVIRSPMVYL 223 (388)
Q Consensus 166 ~~~~~-~~~~~~~~~~--------~~~~~~~~v~VvG~G~-------~----a~e~a~~l~~~~--~~v~~~~r~~~~~~ 223 (388)
.. ...+.....+ .........+|++.|. . +++++..+.+.+ .+|+++.+.+.
T Consensus 120 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~--- 193 (401)
T 3vrd_B 120 ---LAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQT--- 193 (401)
T ss_dssp ---GGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSS---
T ss_pred ---cccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEccccc---
Confidence 11 1122221111 0111233344444333 2 345555555554 57899888772
Q ss_pred hHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc-
Q 016519 224 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG- 300 (388)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~- 300 (388)
+.+....+. .+ ...+.+.+++.+|+++.+ +..++.
T Consensus 194 ------~~~~~~~~~---~~---------------------------------~~~~~~~l~~~gi~v~~~~~v~~v~~~ 231 (401)
T 3vrd_B 194 ------FSKQAQFTK---GW---------------------------------ERLYGFGTENALIEWHPGPDAAVVKTD 231 (401)
T ss_dssp ------CTTHHHHHH---HH---------------------------------HHHSCTTSTTCSEEEECTTTTCEEEEE
T ss_pred ------ccccccccH---HH---------------------------------HHHHHHHHHhcCcEEEeCceEEEEEec
Confidence 222111111 11 111235567789999887 666653
Q ss_pred ---CeEEeeCCcEEeccEEEEccCCCCCCcccccCCCCccCCCCCcCCCCCC-CccCCCceEEEeccccCc------ccc
Q 016519 301 ---NEVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPN-HWKGKNGLYCVGLSRKGL------YGA 370 (388)
Q Consensus 301 ---~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~vy~~Gd~~~~~------~~a 370 (388)
..+.+.+|+++++|++++++|.+|+ .+.... .+.+++|++.||+.+ +.++.|||||+|||+... ..|
T Consensus 232 ~~~~~v~~~~g~~i~~D~vi~~~g~~~~--~~~~~~-gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A 308 (401)
T 3vrd_B 232 TEAMTVETSFGETFKAAVINLIPPQRAG--KIAQSA-SLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSA 308 (401)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEEC--HHHHHT-TCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHH
T ss_pred ccceEEEcCCCcEEEeeEEEEecCcCCc--hhHhhc-cccccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHH
Confidence 2588899999999999999999986 455555 457889999999764 568899999999997642 278
Q ss_pred hhhHHHHHHHhhhcc
Q 016519 371 AADAQNIADHINSIL 385 (388)
Q Consensus 371 ~~~~~~~a~~i~~~l 385 (388)
+.||+.+|+||.+.|
T Consensus 309 ~~qa~v~A~ni~~~l 323 (401)
T 3vrd_B 309 NSQAKVAAAAVVALL 323 (401)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998765
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.93 E-value=2.7e-26 Score=220.57 Aligned_cols=254 Identities=17% Similarity=0.158 Sum_probs=170.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.+||+|||||++|+++|..|++. ++|+|||+++.+||.|....+. .+. ++. ...++...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---------~~g---------~~~--~~~~~~~~ 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---------QEG---------FNK--DSRKVVEE 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---------ETT---------TTE--EHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---------cCC---------CCC--CHHHHHHH
Confidence 36999999999999999999999 9999999999888876532110 000 011 22333333
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccccC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~~~ 166 (388)
+...+ ..+++. +++++|.+++... ..|.+...+. ++. ..+.||+||+||| +.|..|+++|.+..
T Consensus 167 l~~~l-~~~v~~--~~~~~v~~i~~~~--~~~~~~~~~~---~~~--~~~~~d~lvlAtG--a~~~~~~~~g~~~~---- 230 (493)
T 1y56_A 167 LVGKL-NENTKI--YLETSALGVFDKG--EYFLVPVVRG---DKL--IEILAKRVVLATG--AIDSTMLFENNDMP---- 230 (493)
T ss_dssp HHHTC-CTTEEE--ETTEEECCCEECS--SSEEEEEEET---TEE--EEEEESCEEECCC--EEECCCCCTTTTST----
T ss_pred HHHHH-hcCCEE--EcCCEEEEEEcCC--cEEEEEEecC---CeE--EEEECCEEEECCC--CCccCCCCCCCCCC----
Confidence 32222 334444 7888998888754 5565554321 111 4799999999999 67888888887532
Q ss_pred CCCcceeeccCCC---C-CCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHH
Q 016519 167 TGTGEVIHSTQYK---N-GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVM 242 (388)
Q Consensus 167 ~~~~~~~~~~~~~---~-~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (388)
.+++..... . .....+++++|+|+|.+|+| ..+.+.
T Consensus 231 ----gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~---------------------------------- 270 (493)
T 1y56_A 231 ----GVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERW---------------------------------- 270 (493)
T ss_dssp ----TEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHH----------------------------------
T ss_pred ----CEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhC----------------------------------
Confidence 234332211 0 11234689999999999998 222222
Q ss_pred HHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC----eEEeeCCcEEeccEE
Q 016519 243 LSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVIFENGHSHHFDSI 316 (388)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~~g~~~~~D~v 316 (388)
+++++.+ +.++..+ .+.+.+|+++++|.|
T Consensus 271 ---------------------------------------------GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~V 305 (493)
T 1y56_A 271 ---------------------------------------------GIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDAL 305 (493)
T ss_dssp ---------------------------------------------TCEEEECSSEEEEECSSSCCEEEETTCCEEECSEE
T ss_pred ---------------------------------------------CcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEE
Confidence 3333333 4444332 356778899999999
Q ss_pred EEccCCCCCCcccccCCCCc--cCCCCCcC-CCCCCCccCCCceEEEeccccC--cccchhhHHHHHHHhhhcc
Q 016519 317 VFCTGFKRSTNVWLKGDDSM--LNDDGIPK-QSYPNHWKGKNGLYCVGLSRKG--LYGAAADAQNIADHINSIL 385 (388)
Q Consensus 317 i~atG~~~~~~~~~~~~~~~--~~~~g~~~-~~~~~~~~~~~~vy~~Gd~~~~--~~~a~~~~~~~a~~i~~~l 385 (388)
|+|+|+.|++ .+....... .++.|++. ++ +.++ +.|+||++|||+.. +..|..+|+.+|.+|...+
T Consensus 306 v~a~G~~p~~-~l~~~~g~~~~~~~~g~i~~vd-~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 306 IFADGRRPDI-NPITQAGGKLRFRRGYYSPVLD-EYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EECCCEEECC-HHHHHTTCCEEEETTEEEECCC-TTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred EECCCcCcCc-hHHHhcCCCccccCCceeeccc-cccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 9999999998 454444222 24578776 56 4455 88999999999864 5589999999999998765
No 94
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.66 E-value=4.4e-20 Score=168.23 Aligned_cols=150 Identities=14% Similarity=0.061 Sum_probs=98.0
Q ss_pred CCeEEEECCChHHHHHHHHHhh--cCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
.+||+||||||+|++||.+|++ .|++|+|||+.+.+||......+ ..+ ...+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~-----------------~~~--------~~~l~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ-----------------LFS--------AMVMR 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST-----------------TCC--------CEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc-----------------cCC--------HHHHH
Confidence 4799999999999999999975 59999999999988874321100 000 00001
Q ss_pred HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 016519 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (388)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~g~~~~~~ 164 (388)
.....+.+++++++ ..+. . .....+.++++++ ..+..+.++|...+
T Consensus 120 ~~~~~~~~e~Gv~~--~~~~-----------~-----------------~~~~~~~~~~~~~--~~~~~~~~~g~~~~-- 165 (326)
T 3fpz_A 120 KPAHLFLQELEIPY--EDEG-----------D-----------------YVVVKHAALFIST--VLSKVLQLPNVKLF-- 165 (326)
T ss_dssp TTTHHHHHHTTCCC--EECS-----------S-----------------EEEESCHHHHHHH--HHHHHHTSTTEEEE--
T ss_pred HHHHHHHHHcCCEE--EECC-----------c-----------------ceecceeEEEEcc--hhhhccccccceee--
Confidence 11223345556553 2111 0 3333444555666 35666667776655
Q ss_pred cCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+...............+++++|+|+|.++++.|..+...+.++++..+..
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 166 ----NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp ----TTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred ----cccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 444333333344455568899999999999999999999999999988776
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.66 E-value=1.8e-16 Score=131.41 Aligned_cols=159 Identities=21% Similarity=0.211 Sum_probs=109.7
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhhh
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMK 267 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (388)
+++|||+|++|+++|..|++.|.+|+++.+++.+ ++... ....+ |...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~---------~~~~~--------------~~~~~----~~~~----- 50 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSK---------VKGVS--------------RVPNY----PGLL----- 50 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCT---------TTTCS--------------CCCCS----TTCT-----
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCc---------ccCch--------------hhhcc----CCCc-----
Confidence 6899999999999999999999999999998721 11000 00000 0000
Q ss_pred hccCCcceeCcchhhhhcCCcEEEecC-ceEEEcC----eEEeeCCcEEeccEEEEccCCCCCCcccccCCCCccCCCCC
Q 016519 268 AAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGI 342 (388)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~ 342 (388)
.....+.+...+.+.+++.+++++.+ +++++.+ .+.+.+| ++++|.||+|+|..|+. ...+....+ +|.
T Consensus 51 -~~~~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~---~~~~g~~~~-~g~ 124 (180)
T 2ywl_A 51 -DEPSGEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTL---PSLLGLTRR-GAY 124 (180)
T ss_dssp -TCCCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHH---HHHHTCCEE-TTE
T ss_pred -CCCCHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCc---cccCCCCcc-Cce
Confidence 00001222333455666677888877 7777643 3666777 89999999999999853 222212235 788
Q ss_pred cCCCCCCCccCCCceEEEeccccCc----ccchhhHHHHHHHhhhcc
Q 016519 343 PKQSYPNHWKGKNGLYCVGLSRKGL----YGAAADAQNIADHINSIL 385 (388)
Q Consensus 343 ~~~~~~~~~~~~~~vy~~Gd~~~~~----~~a~~~~~~~a~~i~~~l 385 (388)
+.+| +.++++.|+|||+|||+... ..|..+|+.+|.+|...+
T Consensus 125 i~vd-~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~ 170 (180)
T 2ywl_A 125 IDTD-EGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDL 170 (180)
T ss_dssp ECCC-TTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeC-CCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHh
Confidence 8888 56678999999999998753 378999999999998865
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.55 E-value=8.4e-16 Score=146.60 Aligned_cols=187 Identities=12% Similarity=0.058 Sum_probs=99.4
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc--cccCCc-----C--ceee-----------------------
Q 016519 9 EVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI--WKKYSY-----D--RLRL----------------------- 56 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~--~~~~~~-----~--~~~~----------------------- 56 (388)
||+|||||++|+++|..|++.|.+|+|+|+. ..+|. |..... + ....
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 44432 211100 0 0000
Q ss_pred ecCC---cc--ccCCCCC----CC-CCCC-----CCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcE-EE
Q 016519 57 HLAK---QF--CQLPHLP----FP-SSYP-----MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMW-NV 120 (388)
Q Consensus 57 ~~~~---~~--~~~~~~~----~~-~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~v 120 (388)
..+. .+ ...+... .. ..++ ...+...+.+.+.+.+++.++++ +.++.| ++..++ +.. -+
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i--~~~~~v-~l~~~~--~~v~Gv 154 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI--IEDRLV-EIRVKD--GKVTGF 154 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE--ECCCEE-EEEEET--TEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE--EECcEE-EEEEeC--CEEEEE
Confidence 0000 00 0011100 00 0000 01234567777777777778877 889999 887654 332 23
Q ss_pred EEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCC-CcccccccCCCCcceeecc-----CCCCCCCCCC-CeEEEEC
Q 016519 121 KASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIR-GLSSFCSSATGTGEVIHST-----QYKNGKPYGG-KNVLVVG 193 (388)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~~~-g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~v~VvG 193 (388)
...+. . .++.+|.||+|||.++ ..+... +.... .+..+... ...+....+. ..++++|
T Consensus 155 ~v~~~-~------g~~~a~~VVlAtGg~~--~~~~~~~~~~~~------tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~g 219 (472)
T 2e5v_A 155 VTEKR-G------LVEDVDKLVLATGGYS--YLYEYSSTQSTN------IGDGMAIAFKAGTILADMEFVQFHPTVTSLD 219 (472)
T ss_dssp EETTT-E------EECCCSEEEECCCCCG--GGSSSBSSCTTC------SCHHHHHHHHTTCCEECTTCEEEEEEEECGG
T ss_pred EEEeC-C------CeEEeeeEEECCCCCc--ccCccccCCCCC------chHHHHHHHHcCCCEeCCcceEEEeEEEccC
Confidence 33321 1 5678999999999643 333321 11111 11111000 1111121111 2345567
Q ss_pred CCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 194 SGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 194 ~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
+| +++++..+...|..+ +..+..
T Consensus 220 gg--~~~~ae~~~~~G~~~-v~~~g~ 242 (472)
T 2e5v_A 220 GE--VFLLTETLRGEGAQI-INENGE 242 (472)
T ss_dssp GC--CEECCTHHHHTTCEE-EETTCC
T ss_pred CC--ceeeehhhcCCceEE-ECCCCC
Confidence 66 777777777778776 555555
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.52 E-value=8.6e-15 Score=136.61 Aligned_cols=135 Identities=16% Similarity=0.148 Sum_probs=88.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc---------CCcC---ceeeecCCccc----cC-----
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK---------YSYD---RLRLHLAKQFC----QL----- 65 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~---------~~~~---~~~~~~~~~~~----~~----- 65 (388)
.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.|.. +... ......+.... .+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 389999999999999999999999999999999877654421 0000 00000000000 00
Q ss_pred ------CCCCCC--CCCCCCC--CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCC--CCcEEEEEcccCCCCceee
Q 016519 66 ------PHLPFP--SSYPMFV--SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGRVIE 133 (388)
Q Consensus 66 ------~~~~~~--~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~v~~~~~~~~~~~~~ 133 (388)
...++. ..-..|+ ...++.+.+...+++.++++ +++++|+++..+++ ++.|.|.+.+
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i--~~~~~v~~i~~~~~g~~~~~~v~~~~--------- 152 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKI--LLRSEVSQVERIQNDEKVRFVLQVNS--------- 152 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEE--ECSCCEEEEEECCSCSSCCEEEEETT---------
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEE--EeCCEEEEEEcccCcCCCeEEEEECC---------
Confidence 000000 0001112 56778888888888888877 99999999987511 2458887754
Q ss_pred EEEeeCEEEEeecCCCCCC
Q 016519 134 EYYSGRFLVVASGETSNPF 152 (388)
Q Consensus 134 ~~~~~d~li~AtG~~s~p~ 152 (388)
.++++|+||+|||.++.|.
T Consensus 153 g~i~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 153 TQWQCKNLIVATGGLSMPG 171 (401)
T ss_dssp EEEEESEEEECCCCSSCGG
T ss_pred CEEECCEEEECCCCccCCC
Confidence 6799999999999876553
No 98
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.39 E-value=1.9e-12 Score=121.17 Aligned_cols=134 Identities=17% Similarity=0.147 Sum_probs=90.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC------------CcCceeeecCCccc----cC----
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY------------SYDRLRLHLAKQFC----QL---- 65 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~------------~~~~~~~~~~~~~~----~~---- 65 (388)
..+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.+... ....+....+.... .+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 35899999999999999999999999999999999877644210 00000000000000 00
Q ss_pred -------CCCCC-----CCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceee
Q 016519 66 -------PHLPF-----PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIE 133 (388)
Q Consensus 66 -------~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~ 133 (388)
...+. ...++ ......+.+.+.+.+++.++++ +++++|+++..++ +.|.|.+.+
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv~i--~~~~~V~~i~~~~--~~~~V~~~~--------- 171 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGVQL--RLETSIGEVERTA--SGFRVTTSA--------- 171 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETT---------
T ss_pred HHHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECC---------
Confidence 00000 00011 1245678888888888888877 9999999998765 568888865
Q ss_pred EEEeeCEEEEeecCCCCCCC
Q 016519 134 EYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 134 ~~~~~d~li~AtG~~s~p~~ 153 (388)
.++++|+||+|+|.++.|..
T Consensus 172 g~i~ad~VIlAtG~~S~p~~ 191 (417)
T 3v76_A 172 GTVDAASLVVASGGKSIPKM 191 (417)
T ss_dssp EEEEESEEEECCCCSSCGGG
T ss_pred cEEEeeEEEECCCCccCCCC
Confidence 68999999999998776543
No 99
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.34 E-value=1.3e-11 Score=101.93 Aligned_cols=111 Identities=19% Similarity=0.269 Sum_probs=82.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (388)
+||+|||||++|+.+|..|++.|.+|+|+|+.+..- ... ..+..++. ++......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~---~~~----------~~~~~~~~------~~~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV---KGV----------SRVPNYPG------LLDEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT---TTC----------SCCCCSTT------CTTCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc---cCc----------hhhhccCC------CcCCCCHHHHHHHH
Confidence 699999999999999999999999999999976221 000 00000111 11124578899999
Q ss_pred HHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
.+.+++.++++ +++ +|++++..+ +.|.|.+.+ .++++|.||+|+|. .|.+
T Consensus 63 ~~~~~~~gv~v--~~~-~v~~i~~~~--~~~~v~~~~---------g~i~ad~vI~A~G~--~~~~ 112 (180)
T 2ywl_A 63 EAHARRYGAEV--RPG-VVKGVRDMG--GVFEVETEE---------GVEKAERLLLCTHK--DPTL 112 (180)
T ss_dssp HHHHHHTTCEE--EEC-CCCEEEECS--SSEEEECSS---------CEEEEEEEEECCTT--CCHH
T ss_pred HHHHHHcCCEE--EeC-EEEEEEEcC--CEEEEEECC---------CEEEECEEEECCCC--CCCc
Confidence 99999988876 888 999998765 567787754 57899999999995 5543
No 100
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.31 E-value=8.4e-12 Score=116.24 Aligned_cols=135 Identities=13% Similarity=0.106 Sum_probs=84.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccc------c---------C-------CcCceeeecCCcccc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK------K---------Y-------SYDRLRLHLAKQFCQ 64 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~------~---------~-------~~~~~~~~~~~~~~~ 64 (388)
+|||+||||||+|+++|..|+++|++|+|||+.+.+|.... . . ......+..+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 38999999999999999999999999999999876543110 0 0 001111111111000
Q ss_pred C--CCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEE
Q 016519 65 L--PHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLV 142 (388)
Q Consensus 65 ~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li 142 (388)
. ..............+..+.+++.+.+.+.+.+. +++++|+++..++ +.......... ++. .++++|.||
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~--~~~~~v~~~~~~~--~~~~~v~~~~~--~~~--~~~~a~~vI 155 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHN--NEI--VDVRAKMVI 155 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEET--TEE--EEEEEEEEE
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEE--eeeeeeeeeeecc--ceeeeeeeccc--ccc--eEEEEeEEE
Confidence 0 000000011112478889999998888888887 8999999888765 33322221111 122 679999999
Q ss_pred EeecCCC
Q 016519 143 VASGETS 149 (388)
Q Consensus 143 ~AtG~~s 149 (388)
.|+|..|
T Consensus 156 gAdG~~S 162 (397)
T 3oz2_A 156 AADGFES 162 (397)
T ss_dssp ECCCTTC
T ss_pred eCCcccc
Confidence 9999755
No 101
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.31 E-value=9.6e-12 Score=116.05 Aligned_cols=134 Identities=13% Similarity=0.100 Sum_probs=88.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC------------Cc----------CceeeecCCcc--
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY------------SY----------DRLRLHLAKQF-- 62 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~------------~~----------~~~~~~~~~~~-- 62 (388)
++||+|||||++|+++|..|++.|++|+|||+.+..|+.+... .+ ..+....+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 3799999999999999999999999999999988665421110 00 01111111100
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEE-EEEcccCCCCceeeEEEeeCEE
Q 016519 63 CQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFL 141 (388)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~l 141 (388)
..+.............++..+.+.+.+.+++.++++ +++++|+++...+ +.+. |.+.+.. .. .++++|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~~---~~--~~~~a~~v 154 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHNN---EI--VDVRAKMV 154 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEETT---EE--EEEEEEEE
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEE--EECCEEEEEEEeC--CEEEEEEEEECC---eE--EEEEcCEE
Confidence 011110000111123467888899988888888777 8999999998875 6665 6664321 11 68999999
Q ss_pred EEeecCCC
Q 016519 142 VVASGETS 149 (388)
Q Consensus 142 i~AtG~~s 149 (388)
|.|+|.+|
T Consensus 155 V~A~G~~s 162 (397)
T 3cgv_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999765
No 102
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.31 E-value=1.6e-11 Score=115.55 Aligned_cols=135 Identities=17% Similarity=0.219 Sum_probs=87.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCC----CCcccccCC--------------------cCceeeecCCcc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC----YASIWKKYS--------------------YDRLRLHLAKQF 62 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~----~gg~~~~~~--------------------~~~~~~~~~~~~ 62 (388)
++||+|||||++|+++|..|++.|++|+|+|+.+. .|....... ............
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 48999999999999999999999999999999863 222111110 001111111111
Q ss_pred ccCCCCC--C-CCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeC
Q 016519 63 CQLPHLP--F-PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGR 139 (388)
Q Consensus 63 ~~~~~~~--~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 139 (388)
..+.... . ........++..+.+.+.+.+++.++++ +++++|+++...++...+.+.+.++.. .++++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i--~~~~~v~~i~~~~~~~~v~v~~~~g~~------~~~~a~ 156 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDV--EYEVGVTDIKFFGTDSVTTIEDINGNK------REIEAR 156 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEE--ECSEEEEEEEEETTEEEEEEEETTSCE------EEEEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeCCEEEEEEEcCCCCE------EEEEcC
Confidence 1111100 0 0111223678899999998888888877 999999999887622223455555421 479999
Q ss_pred EEEEeecCCC
Q 016519 140 FLVVASGETS 149 (388)
Q Consensus 140 ~li~AtG~~s 149 (388)
.||.|+|.++
T Consensus 157 ~vV~A~G~~s 166 (421)
T 3nix_A 157 FIIDASGYGR 166 (421)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCch
Confidence 9999999754
No 103
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.30 E-value=2.6e-12 Score=110.73 Aligned_cols=172 Identities=19% Similarity=0.210 Sum_probs=101.0
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCC----hhhHHHHHHHHHHHHhcCccccccCCCCCC
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVP----CGGVDTLMVMLSRLVYGDLSKYGIHKPREG 262 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (388)
.+|+|||+|++|+++|..|++.|.+|+++.+.... .+.......+ ..+...+ .+ ..+
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~-~G~~~~~~~~~~~~~~~~~~~---------~d---------~~g 64 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA-VMMPFLPPKPPFPPGSLLERA---------YD---------PKD 64 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG-TTCCSSCCCSCCCTTCHHHHH---------CC---------TTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc-CCcccCccccccchhhHHhhh---------cc---------CCC
Confidence 46999999999999999999999999999998411 0000000000 0011100 00 000
Q ss_pred chhhhhccCCcceeCcchhhhhcCC-cEEEecC-ceEEEcC-----eEEeeCCcEEeccEEEEccCCCCCCcccc-----
Q 016519 263 PFFMKAAYGKYPVIDAGTCEKIKSG-QIQVLPG-IESIRGN-----EVIFENGHSHHFDSIVFCTGFKRSTNVWL----- 330 (388)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~-v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~~----- 330 (388)
+ ....+...+.+.+++. +++++.. ++++..+ .+.+.+|+++.+|.||+|+|...+...+.
T Consensus 65 ~--------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~ 136 (232)
T 2cul_A 65 E--------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVE 136 (232)
T ss_dssp C--------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEE
T ss_pred C--------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccC
Confidence 0 1123334455666664 8888855 7776532 36677888899999999999966542110
Q ss_pred --------------c---CCCCccCC--------CCCcC-------CC------CCCCccCCCceEEEeccccC---ccc
Q 016519 331 --------------K---GDDSMLND--------DGIPK-------QS------YPNHWKGKNGLYCVGLSRKG---LYG 369 (388)
Q Consensus 331 --------------~---~~~~~~~~--------~g~~~-------~~------~~~~~~~~~~vy~~Gd~~~~---~~~ 369 (388)
+ .......+ .|.+. .. .....++.|+||++|||+ . ...
T Consensus 137 ~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~~~~ 215 (232)
T 2cul_A 137 EAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGDYAR 215 (232)
T ss_dssp SEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCCHHH
T ss_pred CCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCccHHH
Confidence 0 00000000 01000 00 011225789999999999 4 237
Q ss_pred chhhHHHHHHHhhhccC
Q 016519 370 AAADAQNIADHINSILS 386 (388)
Q Consensus 370 a~~~~~~~a~~i~~~l~ 386 (388)
++.||+.+|.+|.+.|.
T Consensus 216 ~~~~g~~~a~~i~~~l~ 232 (232)
T 2cul_A 216 MSEEGKRLAEHLLHELG 232 (232)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 78999999999998763
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.29 E-value=1.3e-11 Score=106.43 Aligned_cols=124 Identities=16% Similarity=0.057 Sum_probs=81.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
.+||+|||||++|+++|..|+++|.+|+|||+.....|.|.......+ .....+..+.. ..-+++..+.++
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~--~~~~~~~~~~d-------~~g~~~~~~~~~ 73 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPF--PPGSLLERAYD-------PKDERVWAFHAR 73 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCC--CTTCHHHHHCC-------TTCCCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcccccc--chhhHHhhhcc-------CCCCCHHHHHHH
Confidence 489999999999999999999999999999997433332221110000 00000000000 001156688888
Q ss_pred HHHHHHhc-CCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 016519 87 LDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (388)
Q Consensus 87 l~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p 151 (388)
+.+.+++. ++.+ + +++|+++..++ +..+.|.+.++ .++++|+||+|+|.++..
T Consensus 74 l~~~~~~~~gv~i--~-~~~v~~i~~~~-~~v~~v~~~~g--------~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 74 AKYLLEGLRPLHL--F-QATATGLLLEG-NRVVGVRTWEG--------PPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp HHHHHHTCTTEEE--E-ECCEEEEEEET-TEEEEEEETTS--------CCEECSEEEECCTTCSSC
T ss_pred HHHHHHcCCCcEE--E-EeEEEEEEEeC-CEEEEEEECCC--------CEEECCEEEECCCCChhh
Confidence 88888886 7764 5 67899998765 22346777654 579999999999975444
No 105
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.28 E-value=1e-11 Score=116.38 Aligned_cols=132 Identities=23% Similarity=0.299 Sum_probs=86.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc------c-------------c-----cCCcCceeeecCC-
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI------W-------------K-----KYSYDRLRLHLAK- 60 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~------~-------------~-----~~~~~~~~~~~~~- 60 (388)
.++||+|||||++|+++|..|++.|++|+|||+.+..... + . ......+......
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 4689999999999999999999999999999998754310 0 0 0011111111111
Q ss_pred --ccccCCCCCCC---CCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEE
Q 016519 61 --QFCQLPHLPFP---SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (388)
Q Consensus 61 --~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (388)
....++..... ........+..+.+.+.+.+++ ..+ +++++|++++..+ +.++|++.++ .+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i--~~~~~v~~i~~~~--~~v~v~~~~g--------~~ 167 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSV--QFGKRVTRCEEDA--DGVTVWFTDG--------SS 167 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGE--EESCCEEEEEEET--TEEEEEETTS--------CE
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEE--EECCEEEEEEecC--CcEEEEEcCC--------CE
Confidence 11111100000 0111124677888888887766 444 9999999999876 6788888876 68
Q ss_pred EeeCEEEEeecCCCCC
Q 016519 136 YSGRFLVVASGETSNP 151 (388)
Q Consensus 136 ~~~d~li~AtG~~s~p 151 (388)
+++|.||.|+|.+|.-
T Consensus 168 ~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 168 ASGDLLIAADGSHSAL 183 (407)
T ss_dssp EEESEEEECCCTTCSS
T ss_pred EeeCEEEECCCcChHH
Confidence 9999999999986543
No 106
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.27 E-value=2.2e-11 Score=118.55 Aligned_cols=135 Identities=19% Similarity=0.155 Sum_probs=86.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC--------------CcCce---eeecCCc-c-----
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--------------SYDRL---RLHLAKQ-F----- 62 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~--------------~~~~~---~~~~~~~-~----- 62 (388)
..+||+||||||+|+++|..|++.|++|+|||+.+......... .++.+ ....... +
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 35899999999999999999999999999999977543110000 00000 0000000 0
Q ss_pred --ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCE
Q 016519 63 --CQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRF 140 (388)
Q Consensus 63 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 140 (388)
+.+..............+..+.+.+.+.+++.++++ +++++|++++.++ +.++|++.+.+ |+ .++++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~l~~~~--~~v~v~~~~~~--G~---~~~~a~~ 198 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEI--PRGHEVTRLRQDA--EAVEVTVAGPS--GP---YPVRARY 198 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEEC--CBSCEEEECCBCS--SCEEEEEEETT--EE---EEEEESE
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC--CeEEEEEEeCC--Cc---EEEEeCE
Confidence 000011111112234678889999998888888777 9999999998765 66777773211 11 4799999
Q ss_pred EEEeecCCC
Q 016519 141 LVVASGETS 149 (388)
Q Consensus 141 li~AtG~~s 149 (388)
||.|+|.+|
T Consensus 199 vV~ADG~~S 207 (570)
T 3fmw_A 199 GVGCDGGRS 207 (570)
T ss_dssp EEECSCSSC
T ss_pred EEEcCCCCc
Confidence 999999865
No 107
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.27 E-value=2.7e-11 Score=116.34 Aligned_cols=136 Identities=21% Similarity=0.215 Sum_probs=89.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc--------------CCcCceeeecCCccccCCCC--
Q 016519 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRLHLAKQFCQLPHL-- 68 (388)
Q Consensus 5 ~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~--------------~~~~~~~~~~~~~~~~~~~~-- 68 (388)
+..+||+||||||+|+++|..|++.|++|+|||+.+..+..-.. ...+.+....+.....+...
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 45689999999999999999999999999999998755321000 01111100000000000000
Q ss_pred ---CCCCCCC--CCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEE
Q 016519 69 ---PFPSSYP--MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVV 143 (388)
Q Consensus 69 ---~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~ 143 (388)
.....++ ...++..+.+.+.+.+++.++++ +++++|++++.++ +.++|++.++. |. .++++|+||.
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~--g~---~~~~a~~vVg 159 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADI--RRGHEVLSLTDDG--AGVTVEVRGPE--GK---HTLRAAYLVG 159 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEE--EETCEEEEEEEET--TEEEEEEEETT--EE---EEEEESEEEE
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEE--ECCcEEEEEEEcC--CeEEEEEEcCC--CC---EEEEeCEEEE
Confidence 0011111 22457788899988888888776 9999999999876 66778877642 11 5899999999
Q ss_pred eecCCC
Q 016519 144 ASGETS 149 (388)
Q Consensus 144 AtG~~s 149 (388)
|+|.+|
T Consensus 160 ADG~~S 165 (500)
T 2qa1_A 160 CDGGRS 165 (500)
T ss_dssp CCCTTC
T ss_pred CCCcch
Confidence 999866
No 108
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.27 E-value=6.4e-12 Score=121.92 Aligned_cols=169 Identities=14% Similarity=0.157 Sum_probs=101.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC-CCCcccccCCcCceee----------e-cCCcc--------ccC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRL----------H-LAKQF--------CQL 65 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~-~~gg~~~~~~~~~~~~----------~-~~~~~--------~~~ 65 (388)
..+||+|||||++|+++|..|++.|.+|+|||+.. .+|.... .+.... . ....+ ..+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~C---nps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSC---NPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSS---SSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccc---cccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 35899999999999999999999999999999874 3332111 000000 0 00000 000
Q ss_pred C---CCCCCCCC--CCCCCHHHHHHHHHHHHHh-cCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeC
Q 016519 66 P---HLPFPSSY--PMFVSRAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGR 139 (388)
Q Consensus 66 ~---~~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 139 (388)
. ....+... ....++..+...+...+++ .++.+ ++++|+.+..++ +..+.|.+.++ .++++|
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I---~~~~V~~L~~e~-g~V~GV~t~dG--------~~I~Ad 171 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI---FQQAVEDLIVEN-DRVVGAVTQMG--------LKFRAK 171 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE---EECCEEEEEESS-SBEEEEEETTS--------EEEEEE
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE---EEEEEEEEEecC-CEEEEEEECCC--------CEEECC
Confidence 0 00000000 0123556788888888877 57663 567898887654 23346777664 689999
Q ss_pred EEEEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEe
Q 016519 140 FLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIR 217 (388)
Q Consensus 140 ~li~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r 217 (388)
.||+|||. .+..+.++|...+ . +.+ +| |.++++++..|.+.|.+|+.+..
T Consensus 172 ~VVLATGt--~s~~~~i~G~~~~------~----------------~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 172 AVVLTVGT--FLDGKIHIGLDNY------S----------------GGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp EEEECCST--TTCCEEECC---------------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred EEEEcCCC--CccCccccCcccC------C----------------CCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 99999995 4444555554432 0 122 56 78899999999999999988854
No 109
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.26 E-value=4.9e-12 Score=121.36 Aligned_cols=139 Identities=16% Similarity=0.126 Sum_probs=87.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeee-cCCccc-cCCCCCCCCCCCCCCCHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLH-LAKQFC-QLPHLPFPSSYPMFVSRAQF 83 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 83 (388)
..+||+|||||++|+++|..|++.|++|+|||+.+.+|+....+.++..... ...... ....+. .......+..++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~~l 168 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFC--TGTLDHISIRQL 168 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTT--CTTCCEEEHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccccc--ccccccCCHHHH
Confidence 4689999999999999999999999999999999877643111111000000 000000 000000 000112356788
Q ss_pred HHHHHHHHHhcCCcceeEeceEEEEEEEeC-CCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 016519 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDE-ATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (388)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p 151 (388)
.+.+.+.+++.++++ +++++|+++...+ +.+.|.|.+.+... |+. .++++|+||+|+|..+.+
T Consensus 169 ~~~L~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~v~~~~~~~-g~~--~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 169 QLLLLKVALLLGVEI--HWGVKFTGLQPPPRKGSGWRAQLQPNPP-AQL--ASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHTTCEE--EESCEEEEEECCCSTTCCBEEEEESCCC-HHH--HTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEecCCCCEEEEEEEECCC-CCE--EEEEcCEEEECCCCCccc
Confidence 888888888888776 9999999998642 23467787742100 111 468999999999976554
No 110
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.25 E-value=2.8e-11 Score=110.24 Aligned_cols=130 Identities=14% Similarity=0.209 Sum_probs=80.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCcccc----------------------
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQ---------------------- 64 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~---------------------- 64 (388)
++||+|||||++|+++|..|++.|++|+|||+.+..||.+..........+.....+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 3799999999999999999999999999999998887755432221111111110000
Q ss_pred ------CCC---CCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEE
Q 016519 65 ------LPH---LPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (388)
Q Consensus 65 ------~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (388)
... .........|.....+....+...+ ++++ +++++|++++..+ +.|+|++.++. ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i--~~~~~v~~i~~~~--~~~~v~~~~g~-------~~ 148 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPV--SFSCRITEVFRGE--EHWNLLDAEGQ-------NH 148 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCE--ECSCCEEEEEECS--SCEEEEETTSC-------EE
T ss_pred cccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcE--EecCEEEEEEEeC--CEEEEEeCCCc-------Cc
Confidence 000 0000001111111223333333333 5555 9999999999876 67999887751 34
Q ss_pred EeeCEEEEeecCCC
Q 016519 136 YSGRFLVVASGETS 149 (388)
Q Consensus 136 ~~~d~li~AtG~~s 149 (388)
.++|+||+|+|..+
T Consensus 149 ~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 149 GPFSHVIIATPAPQ 162 (336)
T ss_dssp EEESEEEECSCHHH
T ss_pred cccCEEEEcCCHHH
Confidence 46999999999744
No 111
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.25 E-value=3.7e-11 Score=115.31 Aligned_cols=136 Identities=18% Similarity=0.130 Sum_probs=89.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc--------------CCcCceeeecCCcc-------c
Q 016519 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRLHLAKQF-------C 63 (388)
Q Consensus 5 ~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~--------------~~~~~~~~~~~~~~-------~ 63 (388)
+..+||+||||||+|+++|..|++.|++|+|||+.+........ ...+.+....+... +
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 89 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPV 89 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceec
Confidence 35689999999999999999999999999999998755321000 01111100000000 0
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEE
Q 016519 64 QLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVV 143 (388)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~ 143 (388)
.+.....+.......++..+.+.+.+.+++.++++ +++++|++++.++ +.++|++.++. |+ .++++|+||.
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~--g~---~~~~a~~vVg 160 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAEL--LRGHTVRALTDEG--DHVVVEVEGPD--GP---RSLTTRYVVG 160 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEE--EESCEEEEEEECS--SCEEEEEECSS--CE---EEEEEEEEEE
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEEEcCC--Cc---EEEEeCEEEE
Confidence 00000000011123467888999988888888776 9999999998866 56778877652 12 5899999999
Q ss_pred eecCCC
Q 016519 144 ASGETS 149 (388)
Q Consensus 144 AtG~~s 149 (388)
|+|.+|
T Consensus 161 ADG~~S 166 (499)
T 2qa2_A 161 CDGGRS 166 (499)
T ss_dssp CCCTTC
T ss_pred ccCccc
Confidence 999876
No 112
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.23 E-value=1.4e-11 Score=112.72 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=84.7
Q ss_pred CeEEEECCChHHHHHHHHHhh---cCCCEEEEeecCCCCcccccCC---cCceeeecCCccccCCC--------------
Q 016519 8 VEVIIVGAGPSGLATAACLSL---QSIPYVILERENCYASIWKKYS---YDRLRLHLAKQFCQLPH-------------- 67 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~---~g~~v~lie~~~~~gg~~~~~~---~~~~~~~~~~~~~~~~~-------------- 67 (388)
+||+|||||++|+++|+.|++ .|++|+|||+.+..||.+.... +.....+....++....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 599999999999999999999 8999999999998888655321 11222222211110000
Q ss_pred ---C--CCC---------CCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceee
Q 016519 68 ---L--PFP---------SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIE 133 (388)
Q Consensus 68 ---~--~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~ 133 (388)
. ++. .....|.....+..+.+.+++..+.++ +++++|++++..+ +.|+|.+.++
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i--~~~~~V~~i~~~~--~~~~v~~~~g-------- 149 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEV--YFRHRVTQINLRD--DKWEVSKQTG-------- 149 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEESSS--------
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEE--EeCCEEEEEEEcC--CEEEEEECCC--------
Confidence 0 000 000112222334555666666667666 9999999999865 6799998775
Q ss_pred EEEeeCEEEEeecC
Q 016519 134 EYYSGRFLVVASGE 147 (388)
Q Consensus 134 ~~~~~d~li~AtG~ 147 (388)
.++++|+||+|+..
T Consensus 150 ~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 150 SPEQFDLIVLTMPV 163 (342)
T ss_dssp CCEEESEEEECSCH
T ss_pred CEEEcCEEEECCCH
Confidence 45799999999984
No 113
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.23 E-value=3.3e-11 Score=116.23 Aligned_cols=140 Identities=19% Similarity=0.256 Sum_probs=86.0
Q ss_pred CcccCCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCC----CCcccccC----------Cc--------Cce---e
Q 016519 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENC----YASIWKKY----------SY--------DRL---R 55 (388)
Q Consensus 1 m~~~~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~----~gg~~~~~----------~~--------~~~---~ 55 (388)
|++...++||+|||||++|+++|..|++.|++|+|||+.+. .|..+... .+ ... .
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~ 80 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGT 80 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEE
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCce
Confidence 55444458999999999999999999999999999999872 22211100 00 000 0
Q ss_pred eecCCc----cccCCCCCC-CCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCc---EEEEEcccCC
Q 016519 56 LHLAKQ----FCQLPHLPF-PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNM---WNVKASNLLS 127 (388)
Q Consensus 56 ~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~v~~~~~~~ 127 (388)
...... ...+...+. ........++..+.+.+.+.+++.++++ +++++|+++...+ +. +++...++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~~~~V~~v~~~~--~~v~gv~~~~~dG-- 154 (512)
T 3e1t_A 81 FRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDV--RERHEVIDVLFEG--ERAVGVRYRNTEG-- 154 (512)
T ss_dssp EECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEET--TEEEEEEEECSSS--
T ss_pred EEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEEC--CEEEEEEEEeCCC--
Confidence 000000 001111000 0111123678899999999888888776 9999999998865 43 33333333
Q ss_pred CCceeeEEEeeCEEEEeecCCCC
Q 016519 128 PGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 128 ~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
+. .++++|.||.|+|.+|.
T Consensus 155 --~~--~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 155 --VE--LMAHARFIVDASGNRTR 173 (512)
T ss_dssp --CE--EEEEEEEEEECCCTTCS
T ss_pred --CE--EEEEcCEEEECCCcchH
Confidence 21 58999999999997553
No 114
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.22 E-value=2.1e-11 Score=115.65 Aligned_cols=134 Identities=18% Similarity=0.241 Sum_probs=87.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC--CcCceeee-cCCcc---------------ccC--
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--SYDRLRLH-LAKQF---------------CQL-- 65 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~--~~~~~~~~-~~~~~---------------~~~-- 65 (388)
..+||+|||||++|+++|..|++.|.+|+|+|+.+..|+..... ....+... .+..+ ..+
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 45899999999999999999999999999999988766421100 00000000 00000 000
Q ss_pred ---------CCCCCC-----CCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCc-EEEEEcccCCCCc
Q 016519 66 ---------PHLPFP-----SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNM-WNVKASNLLSPGR 130 (388)
Q Consensus 66 ---------~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~v~~~~~~~~~~ 130 (388)
...++. ..++.......+.+.+...+++.++++ +++++|+++...+ +. |.|.+.++
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i--~~~~~V~~i~~~~--~~v~~V~~~~G----- 175 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKI--RTNTPVETIEYEN--GQTKAVILQTG----- 175 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET--TEEEEEEETTC-----
T ss_pred HHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEE--EeCcEEEEEEecC--CcEEEEEECCC-----
Confidence 000000 001111145677788888888888776 9999999998754 44 88888764
Q ss_pred eeeEEEeeCEEEEeecCCCCC
Q 016519 131 VIEEYYSGRFLVVASGETSNP 151 (388)
Q Consensus 131 ~~~~~~~~d~li~AtG~~s~p 151 (388)
.++++|.||+|+|.++.|
T Consensus 176 ---~~i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 176 ---EVLETNHVVIAVGGKSVP 193 (447)
T ss_dssp ---CEEECSCEEECCCCSSSG
T ss_pred ---CEEECCEEEECCCCCcCC
Confidence 569999999999987754
No 115
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.21 E-value=8.6e-11 Score=114.06 Aligned_cols=134 Identities=19% Similarity=0.185 Sum_probs=89.6
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC------------------------CcCc---e---e
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY------------------------SYDR---L---R 55 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~------------------------~~~~---~---~ 55 (388)
.++||+||||||+|+++|..|+++|++|+|||+.+..+..-... .... + .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 35899999999999999999999999999999987543210000 0000 0 0
Q ss_pred eec--CCccc----cCCC-----CC-CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCC----cEE
Q 016519 56 LHL--AKQFC----QLPH-----LP-FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATN----MWN 119 (388)
Q Consensus 56 ~~~--~~~~~----~~~~-----~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~ 119 (388)
... ...+. .+.. .. .+. .....++..+.+++.+.+++.++++ +++++|++++.++ + .++
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~~~~~v~ 158 (535)
T 3ihg_A 84 AESVRGEILRTVSESFDDMVAATEPCTPA-GWAMLSQDKLEPILLAQARKHGGAI--RFGTRLLSFRQHD--DDAGAGVT 158 (535)
T ss_dssp ESSSSSCEEEEEESCHHHHHHTTGGGCSC-CCBCCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEEC--GGGCSEEE
T ss_pred EeccCCceeeeccccccccccccccCCCC-cccccCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEECC--CCccccEE
Confidence 000 00000 0000 00 011 1224578899999999888888776 9999999999876 4 777
Q ss_pred EEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 120 VKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 120 v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
+++.++.. . .++++|+||.|+|.+|
T Consensus 159 v~~~~~~~--~---~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 159 ARLAGPDG--E---YDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEETTE--E---EEEEEEEEEECCCTTC
T ss_pred EEEEcCCC--e---EEEEeCEEEECCCCcc
Confidence 77776421 2 6899999999999866
No 116
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.21 E-value=1.4e-10 Score=113.47 Aligned_cols=142 Identities=15% Similarity=0.237 Sum_probs=87.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhc------CCCEEEEeecCCCCcccc-cC-------------------CcC------c
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQ------SIPYVILERENCYASIWK-KY-------------------SYD------R 53 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~------g~~v~lie~~~~~gg~~~-~~-------------------~~~------~ 53 (388)
..+||+||||||+|+++|..|++. |++|+|||+.+.+|+... .. ... .
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~ 113 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDR 113 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhh
Confidence 358999999999999999999999 999999999877654211 00 000 0
Q ss_pred eeeecCCccccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEccc--CCC
Q 016519 54 LRLHLAKQFCQLPHLP---FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNL--LSP 128 (388)
Q Consensus 54 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~--~~~ 128 (388)
+..........++..+ ..........+..+.+++.+.+++.++++ +++++|+++..+++.....|.+.+. ...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~ 191 (584)
T 2gmh_A 114 FGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEV--YPGYAAAEILFHEDGSVKGIATNDVGIQKD 191 (584)
T ss_dssp EEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEEECTTSSEEEEEECCEEECTT
T ss_pred eeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcCCCCEEEEEeCCccccCC
Confidence 0000010011111111 00000112467889999998888888777 9999999998765222233666530 000
Q ss_pred Cce-----eeEEEeeCEEEEeecCCC
Q 016519 129 GRV-----IEEYYSGRFLVVASGETS 149 (388)
Q Consensus 129 ~~~-----~~~~~~~d~li~AtG~~s 149 (388)
|+. ...++++|+||+|+|.+|
T Consensus 192 G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 192 GAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp SCEEEEEECCCEEECSEEEECCCTTC
T ss_pred CCcccccCCceEEECCEEEEeeCCCc
Confidence 110 004799999999999865
No 117
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.19 E-value=6.5e-11 Score=110.61 Aligned_cols=131 Identities=15% Similarity=0.118 Sum_probs=87.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCc------cccc--------CC----------cCceeeecCC--
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS------IWKK--------YS----------YDRLRLHLAK-- 60 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg------~~~~--------~~----------~~~~~~~~~~-- 60 (388)
++||+|||||++|+++|..|++.|++|+|||+.+.... .+.. .. ...+......
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 48999999999999999999999999999999865411 0000 00 0011111000
Q ss_pred ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhc-CCcceeEeceEEEEEEEeCCCCcE--EEEEcccCCCCceeeEEE
Q 016519 61 QFCQLPHLPFP-SSYPMFVSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMW--NVKASNLLSPGRVIEEYY 136 (388)
Q Consensus 61 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~ 136 (388)
....+...... ..+....++..+.+.+.+.+++. ++++ +++++|++++.++ +.+ .|++.++ .++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~g~v~~~~g--------~~~ 153 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEM--LFETRIEAVQRDE--RHAIDQVRLNDG--------RVL 153 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEE--ECSCCEEEEEECT--TSCEEEEEETTS--------CEE
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEE--EcCCEEEEEEEcC--CceEEEEEECCC--------CEE
Confidence 01111110000 01112357888999998888887 7776 8999999998865 567 7888765 689
Q ss_pred eeCEEEEeecCCC
Q 016519 137 SGRFLVVASGETS 149 (388)
Q Consensus 137 ~~d~li~AtG~~s 149 (388)
++|.||.|+|.+|
T Consensus 154 ~ad~vV~AdG~~s 166 (399)
T 2x3n_A 154 RPRVVVGADGIAS 166 (399)
T ss_dssp EEEEEEECCCTTC
T ss_pred ECCEEEECCCCCh
Confidence 9999999999755
No 118
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.18 E-value=1.3e-10 Score=108.41 Aligned_cols=130 Identities=17% Similarity=0.198 Sum_probs=82.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCC-----CcccccCCcC------------ce---------eeecCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY-----ASIWKKYSYD------------RL---------RLHLAK 60 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~-----gg~~~~~~~~------------~~---------~~~~~~ 60 (388)
.+||+|||||++|+++|..|++.|++|+|||+.+.. |+.+...... .+ ......
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 479999999999999999999999999999998643 2222111000 00 000000
Q ss_pred --ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEe
Q 016519 61 --QFCQLPHLPFP-SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYS 137 (388)
Q Consensus 61 --~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 137 (388)
...... .+.. ........+..+.+++.+.++. .. ++++++|++++..+ +.|+|++.++ .+++
T Consensus 106 g~~~~~~~-~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~--i~~~~~v~~i~~~~--~~v~v~~~~g--------~~~~ 170 (398)
T 2xdo_A 106 GNILSTKN-VKPENRFDNPEINRNDLRAILLNSLEN--DT--VIWDRKLVMLEPGK--KKWTLTFENK--------PSET 170 (398)
T ss_dssp SEEEEECC-CGGGTTSSCCEECHHHHHHHHHHTSCT--TS--EEESCCEEEEEECS--SSEEEEETTS--------CCEE
T ss_pred CCchhhcc-ccccCCCCCceECHHHHHHHHHhhcCC--CE--EEECCEEEEEEECC--CEEEEEECCC--------cEEe
Confidence 000000 0000 0001124667777777665443 33 48999999998865 6788888775 5789
Q ss_pred eCEEEEeecCCCCC
Q 016519 138 GRFLVVASGETSNP 151 (388)
Q Consensus 138 ~d~li~AtG~~s~p 151 (388)
+|.||.|+|.+|..
T Consensus 171 ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 171 ADLVILANGGMSKV 184 (398)
T ss_dssp ESEEEECSCTTCSC
T ss_pred cCEEEECCCcchhH
Confidence 99999999986643
No 119
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.17 E-value=8e-11 Score=113.85 Aligned_cols=171 Identities=12% Similarity=0.086 Sum_probs=107.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC-CCCcccccCCcCceeee-----------cCCcc--------ccC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRLH-----------LAKQF--------CQL 65 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~-~~gg~~~~~~~~~~~~~-----------~~~~~--------~~~ 65 (388)
..+||+|||||++|++||..|++.|.+|+|||+.. .+|... +.+..... ....+ ..+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~---Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS---CNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC---SCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC---ccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 35899999999999999999999999999999974 344211 00000000 00000 000
Q ss_pred C---CCCCCCCC--CCCCCHHHHHHHHHHHHHh-cCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeC
Q 016519 66 P---HLPFPSSY--PMFVSRAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGR 139 (388)
Q Consensus 66 ~---~~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 139 (388)
. ....+... ....++..+.+.+.+.+++ .++++ ++.+|+++..++ +..+.|.+.++ .++.+|
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI---~~~~Vt~L~~e~-g~V~GV~t~dG--------~~i~Ad 170 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI---KQEEVVDIIVKN-NQVVGVRTNLG--------VEYKTK 170 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE---EESCEEEEEESS-SBEEEEEETTS--------CEEECS
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE---EEeEEEEEEecC-CEEEEEEECCC--------cEEEeC
Confidence 0 00000000 0123567788888888877 47663 567898887654 23345777765 689999
Q ss_pred EEEEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 140 FLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 140 ~li~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.||+|||. .+..+.++|...+ . ..+ +| +.++++++..|.+.|.++..+.+..
T Consensus 171 aVVLATG~--~s~~~~~~G~~~~------~----------------~Gr---~G-~~~A~~la~~L~~lG~~v~~l~tgt 222 (637)
T 2zxi_A 171 AVVVTTGT--FLNGVIYIGDKMI------P----------------GGR---LG-EPRSEGLSDFYRRFDFPLIRFKTGT 222 (637)
T ss_dssp EEEECCTT--CBTCEEEETTEEE------E----------------CSB---TT-BCCBCTHHHHHHHTTCCCEEEEEEE
T ss_pred EEEEccCC--CccCceeccceec------C----------------CCC---CC-chhHHHHHHHHHhcCCceEEecCCc
Confidence 99999995 4544555555433 1 111 23 6788999999999999988886644
No 120
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.17 E-value=1.4e-10 Score=109.80 Aligned_cols=62 Identities=6% Similarity=0.075 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEece---EEEEEEEeCCCCcEE-EEEcccCCCCceeeEEEeeCEEEEeecCCCCCC
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQR---SVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~ 152 (388)
....+.+.+...+++.++++ ++++ +|+++...+ +.++ |.+.++ .++++|.||+|+|.++...
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i--~~~t~~~~V~~i~~~~--~~v~gV~t~~G--------~~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKF--VTGTPQGRVVTLIFEN--NDVKGAVTADG--------KIWRAERTFLCAGASAGQF 224 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESTTTTCEEEEEEET--TEEEEEEETTT--------EEEECSEEEECCGGGGGGT
T ss_pred cHHHHHHHHHHHHHhcCCEE--EeCCcCceEEEEEecC--CeEEEEEECCC--------CEEECCEEEECCCCChhhh
Confidence 34577788888888888777 8998 999998865 6777 888775 6899999999999876443
No 121
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.16 E-value=2.8e-10 Score=109.51 Aligned_cols=132 Identities=20% Similarity=0.313 Sum_probs=83.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCC-------cccccCCcCc------------------eeeecCCc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYA-------SIWKKYSYDR------------------LRLHLAKQ 61 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~g-------g~~~~~~~~~------------------~~~~~~~~ 61 (388)
.+||+||||||+|+++|..|++.|++|+|||+.+.++ +.|....... +.......
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4899999999999999999999999999999987552 2232111000 00000000
Q ss_pred cc-------cCCCCCCCC--CCCC--CC---CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCC
Q 016519 62 FC-------QLPHLPFPS--SYPM--FV---SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLS 127 (388)
Q Consensus 62 ~~-------~~~~~~~~~--~~~~--~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~ 127 (388)
.. .+.....+. .+.. +. ....+.+.+.+.+++.++++ +++++|+++...+ +..+.|.+.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I--~~~t~V~~I~~~~-~~v~gV~l~~G-- 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEI--RFSTRVDDLHMED-GQITGVTLSNG-- 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEE--ESSCCEEEEEESS-SBEEEEEETTS--
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEEeC-CEEEEEEECCC--
Confidence 00 000000000 0000 11 12556677777788888777 9999999998764 23455888765
Q ss_pred CCceeeEEEeeCEEEEeecCCC
Q 016519 128 PGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 128 ~~~~~~~~~~~d~li~AtG~~s 149 (388)
.++++|.||+|+|.++
T Consensus 262 ------~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 ------EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp ------CEEECSCEEECCCTTC
T ss_pred ------CEEECCEEEECCCCCh
Confidence 6899999999999755
No 122
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.16 E-value=8.5e-11 Score=109.02 Aligned_cols=125 Identities=14% Similarity=0.156 Sum_probs=83.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc------ccc------------------CCcCceeeecC-Cc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI------WKK------------------YSYDRLRLHLA-KQ 61 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~------~~~------------------~~~~~~~~~~~-~~ 61 (388)
.+||+|||||++|+++|..|++.|++|+|||+.+..+.. +.. .....+....+ ..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 479999999999999999999999999999998765421 000 00001111100 00
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEE
Q 016519 62 FCQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (388)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~l 141 (388)
+..++ .+.......++..+.+.+.+.+++.++++ +++++|++++. + + .|++.++ .++++|.|
T Consensus 91 ~~~~~---~~~~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~-~--~--~v~~~~g--------~~~~ad~v 152 (379)
T 3alj_A 91 VSKET---FNGLPWRIMTRSHLHDALVNRARALGVDI--SVNSEAVAADP-V--G--RLTLQTG--------EVLEADLI 152 (379)
T ss_dssp EEEEC---GGGCCEEEEEHHHHHHHHHHHHHHTTCEE--ESSCCEEEEET-T--T--EEEETTS--------CEEECSEE
T ss_pred eeecc---CCCCceEEECHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEe-C--C--EEEECCC--------CEEEcCEE
Confidence 00000 00000123467888999988888878776 99999999976 2 3 6887765 67999999
Q ss_pred EEeecCCC
Q 016519 142 VVASGETS 149 (388)
Q Consensus 142 i~AtG~~s 149 (388)
|.|+|.+|
T Consensus 153 V~AdG~~s 160 (379)
T 3alj_A 153 VGADGVGS 160 (379)
T ss_dssp EECCCTTC
T ss_pred EECCCccH
Confidence 99999754
No 123
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.16 E-value=3.1e-10 Score=112.27 Aligned_cols=141 Identities=21% Similarity=0.258 Sum_probs=88.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhh-cCCCEEEEeecCCCCcccccC--------------C----------cCceeeecC-
Q 016519 6 AGVEVIIVGAGPSGLATAACLSL-QSIPYVILERENCYASIWKKY--------------S----------YDRLRLHLA- 59 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~-~g~~v~lie~~~~~gg~~~~~--------------~----------~~~~~~~~~- 59 (388)
..+||+||||||+|+++|..|++ .|++|+|||+.+......... . ...+....+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 45899999999999999999999 999999999987553211100 0 000111000
Q ss_pred ----Cccc---cCCCCCCC--CCCCCCCCHHHHHHHHHHHHHhcCC--cceeEeceEEEEEEEeCC--CCcEEEEEcccC
Q 016519 60 ----KQFC---QLPHLPFP--SSYPMFVSRAQFIEYLDHYVSHFNI--VPSIRYQRSVESASYDEA--TNMWNVKASNLL 126 (388)
Q Consensus 60 ----~~~~---~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~v~~~~~~~~--~~~~~v~~~~~~ 126 (388)
..+. .++..... .......++..+.+++.+.+++.+. .+ +++++|++++.+++ ...++|++.+..
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v--~~~~~v~~l~~~~~~~~~~v~v~~~~~~ 188 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEP--HYARRVLDVKVDHGAADYPVTVTLERCD 188 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCC--BCSEEEEEEEECTTCSSCCEEEEEEECS
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEE--ecCCEEEEEEECCCCCcCCEEEEEEecc
Confidence 0000 00100000 0011235778899999998988876 55 99999999987652 125777765300
Q ss_pred --CCCceeeEEEeeCEEEEeecCCCC
Q 016519 127 --SPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 127 --~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
..|.. .++++|+||.|+|.+|.
T Consensus 189 ~~~~G~~--~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 189 AAHAGQI--ETVQARYVVGCDGARSN 212 (639)
T ss_dssp GGGTTCE--EEEEEEEEEECCCTTCH
T ss_pred ccCCCCe--EEEEeCEEEECCCcchH
Confidence 00122 68999999999998663
No 124
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.14 E-value=6.6e-11 Score=110.36 Aligned_cols=135 Identities=17% Similarity=0.105 Sum_probs=83.3
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCC------C-c-cccc--------CC----------cCceeeecCCc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCY------A-S-IWKK--------YS----------YDRLRLHLAKQ 61 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~------g-g-~~~~--------~~----------~~~~~~~~~~~ 61 (388)
+||+|||||++|+++|..|++.|++|+|||+.+.. + + .+.. .. +..+.......
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 79999999999999999999999999999987631 1 1 1110 00 01111111100
Q ss_pred cccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEE-cccCCCCceeeEEEeeC
Q 016519 62 FCQLPHLPFP-SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGRVIEEYYSGR 139 (388)
Q Consensus 62 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~d 139 (388)
...+...... ........+..+.+.+.+.+.+.++++ +++++|+++...+ ++.+.|++ .++ +. .++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~~g----~~--~~~~a~ 153 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATT--VYQAAEVRLHDLQ-GERPYVTFERDG----ER--LRLDCD 153 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEECTT-SSSCEEEEEETT----EE--EEEECS
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeE--EeceeEEEEEEec-CCceEEEEecCC----cE--EEEEeC
Confidence 0000000000 001112356677777777777777766 9999999998653 24567776 454 11 379999
Q ss_pred EEEEeecCCCCC
Q 016519 140 FLVVASGETSNP 151 (388)
Q Consensus 140 ~li~AtG~~s~p 151 (388)
.||.|+|.+|..
T Consensus 154 ~vV~AdG~~S~v 165 (394)
T 1k0i_A 154 YIAGCDGFHGIS 165 (394)
T ss_dssp EEEECCCTTCST
T ss_pred EEEECCCCCcHH
Confidence 999999986654
No 125
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.14 E-value=2.4e-10 Score=105.36 Aligned_cols=62 Identities=8% Similarity=0.016 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
+...+.+.+.+.+++.++++ +++++|+++..++ ++.|.|.+.++.. .++++|.||+|+|.++
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g~~------~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQL--VFHTPLIAGRVRP-EGGFELDFGGAEP------MTLSCRVLINAAGLHA 209 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECT-TSSEEEEECTTSC------EEEEEEEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEE--ECCCEEEEEEEcC-CceEEEEECCCce------eEEEeCEEEECCCcch
Confidence 45677778888888888877 8899999998865 2348888877533 6899999999999865
No 126
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.12 E-value=3.9e-10 Score=105.24 Aligned_cols=129 Identities=16% Similarity=0.038 Sum_probs=80.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCC----Cc-cccc----------CCcCceeeecCCccccC----CC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY----AS-IWKK----------YSYDRLRLHLAKQFCQL----PH 67 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~----gg-~~~~----------~~~~~~~~~~~~~~~~~----~~ 67 (388)
.+||+|||||++|+++|..|++.|++|+|||+.+.. |. .... ...+ .....+.....+ ..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecCCC
Confidence 589999999999999999999999999999997653 11 1000 0000 000000000000 00
Q ss_pred CCCCC-CC-CCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEee
Q 016519 68 LPFPS-SY-PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVAS 145 (388)
Q Consensus 68 ~~~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~At 145 (388)
..... .. .....+..+.+.+.+.+ .++.+ +++++|++++..+ +.++|++.++ .++++|.||.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i--~~~~~v~~i~~~~--~~v~v~~~~g--------~~~~ad~vV~Ad 149 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELF--GPERY--HTSKCLVGLSQDS--ETVQMRFSDG--------TKAEANWVIGAD 149 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHH--CSTTE--ETTCCEEEEEECS--SCEEEEETTS--------CEEEESEEEECC
T ss_pred CccccccCcccccCHHHHHHHHHHhC--CCcEE--EcCCEEEEEEecC--CEEEEEECCC--------CEEECCEEEECC
Confidence 00000 00 01234556666666654 25555 8999999998865 6788888775 689999999999
Q ss_pred cCCCC
Q 016519 146 GETSN 150 (388)
Q Consensus 146 G~~s~ 150 (388)
|.+|.
T Consensus 150 G~~S~ 154 (397)
T 2vou_A 150 GGASV 154 (397)
T ss_dssp CTTCH
T ss_pred Ccchh
Confidence 98654
No 127
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.12 E-value=2.8e-10 Score=111.03 Aligned_cols=135 Identities=15% Similarity=0.122 Sum_probs=87.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc-----ccc--------CCc-----------CceeeecCCc-
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI-----WKK--------YSY-----------DRLRLHLAKQ- 61 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~-----~~~--------~~~-----------~~~~~~~~~~- 61 (388)
.+||+|||||++|+++|..|++.|++|+|||+.+..... +.. ..+ ..........
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 489999999999999999999999999999998543210 000 000 0000000000
Q ss_pred ---cccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEE
Q 016519 62 ---FCQLPHLP---FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (388)
Q Consensus 62 ---~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (388)
...+.... +........++..+.+.+.+.+++.++++ +++++|+++...+ +..+.|.+.++ |+. .+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~V~~v~~~~-g~~~~V~~~~~---G~~--~~ 174 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITV--HEETPVTDVDLSD-PDRVVLTVRRG---GES--VT 174 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEECCS-TTCEEEEEEET---TEE--EE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEEecC---Cce--EE
Confidence 00111000 00111123578889999999888888776 8999999998753 35677888732 121 58
Q ss_pred EeeCEEEEeecCCC
Q 016519 136 YSGRFLVVASGETS 149 (388)
Q Consensus 136 ~~~d~li~AtG~~s 149 (388)
+++|.||.|+|..|
T Consensus 175 i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 175 VESDFVIDAGGSGG 188 (591)
T ss_dssp EEESEEEECCGGGC
T ss_pred EEcCEEEECCCCcc
Confidence 99999999999754
No 128
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.11 E-value=8.9e-11 Score=113.93 Aligned_cols=174 Identities=17% Similarity=0.129 Sum_probs=104.6
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC-CCCcccccCCc---------------Cceee---ecC-CccccC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN-CYASIWKKYSY---------------DRLRL---HLA-KQFCQL 65 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~-~~gg~~~~~~~---------------~~~~~---~~~-~~~~~~ 65 (388)
..+||+|||||++|+++|..|++.|.+|+|+|+.. .+|+.+..... ..+.. ... ..+...
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 45899999999999999999999999999999874 34442221100 00000 000 000000
Q ss_pred CCCCCCCC--CCCCCCHHHHHHHHHHHHHhc-CCcceeEeceEEEEEEEeCCCCcEE-EEEcccCCCCceeeEEEeeCEE
Q 016519 66 PHLPFPSS--YPMFVSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFL 141 (388)
Q Consensus 66 ~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~l 141 (388)
.....+.. .....++..+.+.+.+.+++. ++++ ++.+|+.+..++ +.+. |.+.++ .++++|.|
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I---~~~~V~~L~~d~--g~V~GV~t~~G--------~~i~Ad~V 166 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDL---LQDTVIGVSANS--GKFSSVTVRSG--------RAIQAKAA 166 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEE---EECCEEEEEEET--TEEEEEEETTS--------CEEEEEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEE---EeeEEEEEEecC--CEEEEEEECCC--------cEEEeCEE
Confidence 00000100 001245667888888888774 7664 456888887654 4444 777664 68999999
Q ss_pred EEeecCCCCCCCCCCCCcccccccCCCCcceeeccCCCCCCCCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 142 i~AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
|+|||.+ +..+.+.|...+ .. .++ + |+.++++++..|.+.|.+|..+....
T Consensus 167 VLATG~~--s~~~i~~G~~~~----------------~~------g~~--v-G~~~a~~la~~L~~~G~kv~~l~tGt 217 (641)
T 3cp8_A 167 ILACGTF--LNGLIHIGMDHF----------------PG------GRS--T-AEPPVEGLTESLASLGFSFGRLKTGT 217 (641)
T ss_dssp EECCTTC--BTCEEEETTEEE----------------EC------SSS--T-TSCCBCSHHHHHHHTTCCEEEEEEEE
T ss_pred EECcCCC--CCccceeeeeee----------------cc------ccc--c-CCchhhhhHHHHHhCCceEEeecCCC
Confidence 9999964 332323232211 00 111 1 35778899999999999987775433
No 129
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.11 E-value=1.6e-10 Score=109.75 Aligned_cols=134 Identities=10% Similarity=0.067 Sum_probs=84.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCC--CcccccC-----------CcC----ceeeecCCccccC-CCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY--ASIWKKY-----------SYD----RLRLHLAKQFCQL-PHL 68 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~--gg~~~~~-----------~~~----~~~~~~~~~~~~~-~~~ 68 (388)
++||+||||||+|+++|..|++.|++|+|+|+.+.. |..+... ... ....... ....+ +..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~-~~~~~~~~~ 84 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKIN-GIKLYSPDM 84 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEE-EEEEECTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhc-ceEEECCCC
Confidence 489999999999999999999999999999998753 2221110 000 0000000 00000 000
Q ss_pred ----CCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEE-EEEccc-CCCCceeeEEEeeCEEE
Q 016519 69 ----PFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNL-LSPGRVIEEYYSGRFLV 142 (388)
Q Consensus 69 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-v~~~~~-~~~~~~~~~~~~~d~li 142 (388)
..+. .....++..+.+.+.+.+++.++++ +++++|+++..++ +.+. |++.+. + |+. .++++|.||
T Consensus 85 ~~~~~~~~-~~~~i~r~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~~~--G~~--~~~~ad~VV 155 (453)
T 3atr_A 85 QTVWTVNG-EGFELNAPLYNQRVLKEAQDRGVEI--WDLTTAMKPIFED--GYVKGAVLFNRRT--NEE--LTVYSKVVV 155 (453)
T ss_dssp SCEEEEEE-EEEEECHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEEET--TEEEEEEEEETTT--TEE--EEEECSEEE
T ss_pred ceEEeECC-CcEEEcHHHHHHHHHHHHHHcCCEE--EeCcEEEEEEEEC--CEEEEEEEEEcCC--Cce--EEEEcCEEE
Confidence 0000 0112467888889988888888776 9999999998765 4433 444421 1 121 489999999
Q ss_pred EeecCCCC
Q 016519 143 VASGETSN 150 (388)
Q Consensus 143 ~AtG~~s~ 150 (388)
.|+|..|.
T Consensus 156 ~AdG~~s~ 163 (453)
T 3atr_A 156 EATGYSRS 163 (453)
T ss_dssp ECCGGGCT
T ss_pred ECcCCchh
Confidence 99997554
No 130
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.10 E-value=7.3e-10 Score=98.37 Aligned_cols=134 Identities=16% Similarity=0.204 Sum_probs=79.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-CCCEEEEeecCCCCc-ccccC-CcCceeeecCC-ccccCCCCCCCCC--CCCCCCH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYAS-IWKKY-SYDRLRLHLAK-QFCQLPHLPFPSS--YPMFVSR 80 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~-g~~v~lie~~~~~gg-~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ 80 (388)
.+||+|||||++|+++|..|++. |.+|+|||+.+.+|+ .|... .+..+....+. .++.-...++... +......
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 47999999999999999999997 999999999987765 44321 11121111100 0000000111000 0001145
Q ss_pred HHHHHHHHHHHHh-cCCcceeEeceEEEEEEEeCCCCcE-EEEEc---------ccCCCCceeeEEEeeCEEEEeecC
Q 016519 81 AQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMW-NVKAS---------NLLSPGRVIEEYYSGRFLVVASGE 147 (388)
Q Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~-~v~~~---------~~~~~~~~~~~~~~~d~li~AtG~ 147 (388)
.++...+.+.+.+ .++++ +++++|+++..++ +.. .|.+. ++.. ++. .++++|.||+|+|.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i--~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~-g~~--~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKL--FNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSC-MDP--NVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEE--EETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSC-CCC--EEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHhcCCCEE--EcCcEEEEEEecC--CeEEEEEEeccccccccCcccc-Cce--EEEECCEEEECCCC
Confidence 5666666555544 57666 8999999998764 332 34432 1100 122 68999999999995
No 131
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.10 E-value=1e-09 Score=102.89 Aligned_cols=136 Identities=21% Similarity=0.173 Sum_probs=84.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCC-EEEEeecCCCCccccc--------------CCc----------CceeeecCC-
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILERENCYASIWKK--------------YSY----------DRLRLHLAK- 60 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~-v~lie~~~~~gg~~~~--------------~~~----------~~~~~~~~~- 60 (388)
.+||+|||||++|+++|..|++.|++ |+|||+.+..+..... ..+ ..+......
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 48999999999999999999999999 9999998765321100 000 000100000
Q ss_pred -ccccCCCC-CCCCCCC-CCCCHHHHHHHHHHHHHh-cC-CcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEE
Q 016519 61 -QFCQLPHL-PFPSSYP-MFVSRAQFIEYLDHYVSH-FN-IVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (388)
Q Consensus 61 -~~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~~~~-~~-~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (388)
.....+.. ......+ ....+..+.+++.+.+++ .+ +.+ +++++|++++. + +.++|++.+... |+. .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v--~~~~~v~~i~~-~--~~v~v~~~~~~~-g~~--~~ 155 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAV--RTGLGVERIEE-R--DGRVLIGARDGH-GKP--QA 155 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSE--EESEEEEEEEE-E--TTEEEEEEEETT-SCE--EE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEE--EECCEEEEEec-C--CccEEEEecCCC-CCc--eE
Confidence 00000000 0000111 124677888888877765 35 355 99999999987 4 557787765110 121 57
Q ss_pred EeeCEEEEeecCCCC
Q 016519 136 YSGRFLVVASGETSN 150 (388)
Q Consensus 136 ~~~d~li~AtG~~s~ 150 (388)
+++|.||.|+|.+|.
T Consensus 156 ~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 156 LGADVLVGADGIHSA 170 (410)
T ss_dssp EEESEEEECCCTTCH
T ss_pred EecCEEEECCCccch
Confidence 999999999998664
No 132
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.10 E-value=4.3e-10 Score=103.92 Aligned_cols=62 Identities=11% Similarity=0.165 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
...+.+.+.+.+++.++++ +++++|+++...+ +.|.|.+.+ .++++|.||+|+|.++....+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i--~~~~~V~~i~~~~--~~~~v~~~~---------g~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQ--LFNCPVTAIRHDD--DGVTIETAD---------GEYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS---------CEEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEcC--CEEEEEECC---------CeEEcCEEEEcCCccHHhhcc
Confidence 3467777777788888776 8899999998765 557787765 469999999999987654433
No 133
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.10 E-value=8.6e-10 Score=107.19 Aligned_cols=134 Identities=16% Similarity=0.243 Sum_probs=85.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc----------------------CCcCc------eeeec
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK----------------------YSYDR------LRLHL 58 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~----------------------~~~~~------~~~~~ 58 (388)
.+||+||||||+|+++|..|++.|++|+|||+.+..+..... ...+. .....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 479999999999999999999999999999998765421110 00000 00110
Q ss_pred --CCccccCCCCCC-------CCCC-CCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCC
Q 016519 59 --AKQFCQLPHLPF-------PSSY-PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSP 128 (388)
Q Consensus 59 --~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~ 128 (388)
...+..+..... .... ....++..+.+++.+.+++. + +++++|++++.++ +.+++++.+...
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v--~~~~~v~~~~~~~--~~v~v~~~~~~~- 177 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---L--RTRSRLDSFEQRD--DHVRATITDLRT- 177 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---E--ECSEEEEEEEECS--SCEEEEEEETTT-
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---c--ccCcEEEEEEEeC--CEEEEEEEECCC-
Confidence 001111111000 0000 12246778888888887776 4 9999999998866 567787766211
Q ss_pred CceeeEEEeeCEEEEeecCCCC
Q 016519 129 GRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 129 ~~~~~~~~~~d~li~AtG~~s~ 150 (388)
|+. .++++|+||.|+|.+|.
T Consensus 178 G~~--~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 178 GAT--RAVHARYLVACDGASSP 197 (549)
T ss_dssp CCE--EEEEEEEEEECCCTTCH
T ss_pred CCE--EEEEeCEEEECCCCCcH
Confidence 121 57999999999998663
No 134
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.08 E-value=8e-10 Score=107.98 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=85.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC--Cc----Ccee-----eecCCcc-------------
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--SY----DRLR-----LHLAKQF------------- 62 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~--~~----~~~~-----~~~~~~~------------- 62 (388)
.+||+|||||++|+++|..|++.|.+|+|||+.+..||..... .. ..+. ...+..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 5899999999999999999999999999999998877642211 00 0000 0000000
Q ss_pred -----------------ccCCCCCCC-------CCCC-------CCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEE
Q 016519 63 -----------------CQLPHLPFP-------SSYP-------MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASY 111 (388)
Q Consensus 63 -----------------~~~~~~~~~-------~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~ 111 (388)
+.-...++. ..++ .......+.+.+...+++.++++ +++++|+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i--~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDL--RMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEeeEeEE
Confidence 000000110 0000 01235678888888888888777 99999999987
Q ss_pred eCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 112 DEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 112 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
++++..+.|...+.. |+. .++.+|.||+|||.++.
T Consensus 284 ~~~g~v~Gv~~~~~~--g~~--~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 284 DDKGTVKGILVKGMY--KGY--YWVKADAVILATGGFAK 318 (571)
T ss_dssp CTTSCEEEEEEEETT--TEE--EEEECSEEEECCCCCTT
T ss_pred cCCCeEEEEEEEeCC--CcE--EEEECCeEEEeCCCccc
Confidence 542222334444211 121 47999999999998653
No 135
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.07 E-value=7.1e-10 Score=102.81 Aligned_cols=61 Identities=16% Similarity=0.002 Sum_probs=47.7
Q ss_pred CCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 77 FVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
......+.+.+.+.+++.++++ +++++|+++...+ +.|.|.+.+ .++++|.||+|+|.++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~--~~~~v~~~~---------g~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEI--FEHTPVLHVERDG--EALFIKTPS---------GDVWANHVVVASGVWSG 220 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEE--ETTCCCCEEECSS--SSEEEEETT---------EEEEEEEEEECCGGGTH
T ss_pred EEcHHHHHHHHHHHHHHCCCEE--EcCCcEEEEEEEC--CEEEEEcCC---------ceEEcCEEEECCChhHH
Confidence 3456778888888888888776 8899999998755 567777654 67999999999997543
No 136
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.07 E-value=6.2e-10 Score=104.12 Aligned_cols=129 Identities=21% Similarity=0.235 Sum_probs=75.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCc------c-cccC---------CcCc--------------eee-
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS------I-WKKY---------SYDR--------------LRL- 56 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg------~-~~~~---------~~~~--------------~~~- 56 (388)
.+|+||||||+|+++|..|+++|++|+|||+.+.... . ...+ ..+. ...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 6899999999999999999999999999999764421 0 0000 0000 000
Q ss_pred ecCCccccCCCC--CCCCCCC----CCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCc
Q 016519 57 HLAKQFCQLPHL--PFPSSYP----MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGR 130 (388)
Q Consensus 57 ~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~ 130 (388)
+........... +...... ....+..+.+.+. +..... +++++++++++..+ ++.++|++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~---~~~~~~--v~~~~~v~~~~~~~-~~~v~v~~~dG----- 150 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILN---KGLANT--IQWNKTFVRYEHIE-NGGIKIFFADG----- 150 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHH---TTCTTT--EECSCCEEEEEECT-TSCEEEEETTS-----
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHH---hhccce--EEEEEEEEeeeEcC-CCeEEEEECCC-----
Confidence 000000000000 0000000 0012334443332 223333 49999999998765 35688999887
Q ss_pred eeeEEEeeCEEEEeecCCCC
Q 016519 131 VIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 131 ~~~~~~~~d~li~AtG~~s~ 150 (388)
.++++|.||.|.|..|.
T Consensus 151 ---~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 151 ---SHENVDVLVGADGSNSK 167 (412)
T ss_dssp ---CEEEESEEEECCCTTCH
T ss_pred ---CEEEeeEEEECCCCCcc
Confidence 78899999999998663
No 137
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.07 E-value=7e-10 Score=110.63 Aligned_cols=60 Identities=13% Similarity=0.208 Sum_probs=48.8
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
....+.+.+...+++.++++ +++++|+++..++ +.|.|.+.++ .++++|.||+|+|.++.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G--------~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQI--YYQYQLQNFSRKD--DCWLLNFAGD--------QQATHSVVVLANGHQIS 474 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCGGGGG
T ss_pred CHHHHHHHHHHHHHhCCCEE--EeCCeeeEEEEeC--CeEEEEECCC--------CEEECCEEEECCCcchh
Confidence 34667777777788888777 9999999999876 6688888765 67999999999998643
No 138
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.06 E-value=2.5e-10 Score=102.64 Aligned_cols=104 Identities=21% Similarity=0.271 Sum_probs=63.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCC-cccccCC-cCceeeecCCccccC--CCCCCCC--CCCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYA-SIWKKYS-YDRLRLHLAKQFCQL--PHLPFPS--SYPMFV 78 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~g-g~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~ 78 (388)
.+||+|||||++|+++|..|+++ |++|+|||+.+.+| +.|.... +...... +.....+ ...++.. .+....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~-~~~~~~L~~~Gv~~~~~G~~~~~~ 157 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMR-KPADVFLDEVGVPYEDEGDYVVVK 157 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEE-TTTHHHHHHHTCCCEECSSEEEES
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcc-hHHHHHHHHcCCcccccCCeEEEe
Confidence 58999999999999999999998 99999999988766 4564322 2222222 1111000 0011100 111112
Q ss_pred CHHHHHHHHHHHHHh-cCCcceeEeceEEEEEEEeC
Q 016519 79 SRAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDE 113 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~v~~~~~~~ 113 (388)
...++.+.+...+.. .++++ +.++.++++...+
T Consensus 158 ~~~d~~~~L~~~a~~~~gV~i--~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNVKL--FNATTVEDLITRK 191 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTEEE--EETEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCCCEE--EeCCEEEEEEecC
Confidence 345566666666666 47666 8899998886654
No 139
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.06 E-value=8.3e-10 Score=107.75 Aligned_cols=139 Identities=12% Similarity=0.091 Sum_probs=85.2
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC--Cc----Cc------ee----------------ee
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--SY----DR------LR----------------LH 57 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~--~~----~~------~~----------------~~ 57 (388)
..+||+|||||++|+++|..|++.|.+|+|||+.+..|+..... .. .. +. ..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 35799999999999999999999999999999998776532110 00 00 00 00
Q ss_pred cCCc--------------c--ccCCC--------CCCCCCC---CCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEE
Q 016519 58 LAKQ--------------F--CQLPH--------LPFPSSY---PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESAS 110 (388)
Q Consensus 58 ~~~~--------------~--~~~~~--------~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~ 110 (388)
.+.. + ...+. ...+... ........+.+.+...+++.++++ +++++|+++.
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~l~ 277 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDT--RLNSRVVKLV 277 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCE--ECSEEEEEEE
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEEEEEE
Confidence 0000 0 00000 0001000 011336678888888888888877 9999999998
Q ss_pred EeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 111 YDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
.++++..+.|.+.+.+ |+. .++++|.||+|||.++.
T Consensus 278 ~~~~g~v~Gv~~~~~~--g~~--~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 278 VNDDHSVVGAVVHGKH--TGY--YMIGAKSVVLATGGYGM 313 (566)
T ss_dssp ECTTSBEEEEEEEETT--TEE--EEEEEEEEEECCCCCTT
T ss_pred ECCCCcEEEEEEEeCC--CcE--EEEEcCEEEEecCCccc
Confidence 6531222334444211 121 47999999999998664
No 140
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.03 E-value=2.1e-09 Score=107.39 Aligned_cols=60 Identities=10% Similarity=0.172 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeE-EEeeCEEEEeecCCCC
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEE-YYSGRFLVVASGETSN 150 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~d~li~AtG~~s~ 150 (388)
+...+.+.+...+++.++++ +++++|+++..++ +.|.|.+.++ . ++++|.||+|+|.++.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G--------~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTC--HYQHELQRLKRID--SQWQLTFGQS--------QAAKHHATVILATGHRLP 470 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESCCEEEEEECS--SSEEEEEC-C--------CCCEEESEEEECCGGGTT
T ss_pred CHHHHHHHHHHHHHhCCCEE--EeCCeEeEEEEeC--CeEEEEeCCC--------cEEEECCEEEECCCcchh
Confidence 34567777777778888776 9999999999876 5688888764 4 7999999999998654
No 141
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.02 E-value=1.2e-09 Score=101.24 Aligned_cols=59 Identities=10% Similarity=0.009 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEE-EEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
.+...+.+.+.+.+++.++++ +++++|+++..++ +.+. |.+.+ .++++|.||+|+|.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~v~gv~~~~---------g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKL--LEYTEVKGFLIEN--NEIKGVKTNK---------GIIKTGIVVNATNAWA 205 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEETT---------EEEECSEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEE--ECCceEEEEEEEC--CEEEEEEECC---------cEEECCEEEECcchhH
Confidence 345677788888888888776 8899999998765 6676 77654 6799999999999754
No 142
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.02 E-value=1.7e-09 Score=100.50 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
...+.+.+.+.+++.++.+ +++++|+++...+ +.|.|.+.+ .++++|.||+|+|.++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~---------g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKV--LTHTRVEDFDISP--DSVKIETAN---------GSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SCEEEEETT---------EEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEE--EcCcEEEEEEecC--CeEEEEeCC---------CEEEeCEEEEecCccH
Confidence 4677778888888888776 8899999998765 567777654 6799999999999754
No 143
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.01 E-value=3.9e-09 Score=104.66 Aligned_cols=140 Identities=17% Similarity=0.219 Sum_probs=86.4
Q ss_pred CCeEEEECCChHHHHHHHHHhh-----cCCCEEEEeecCCCCcc-------------------cc---c--CCcCceeee
Q 016519 7 GVEVIIVGAGPSGLATAACLSL-----QSIPYVILERENCYASI-------------------WK---K--YSYDRLRLH 57 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~-----~g~~v~lie~~~~~gg~-------------------~~---~--~~~~~~~~~ 57 (388)
.+||+||||||+|+++|..|++ .|++|+|||+.+..... |. . .....+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5899999999999999999999 99999999987643210 10 0 011111111
Q ss_pred cCC---ccc---cCCCCC-CCCCCC-CCCCHHHHHHHHHHHHHhcC---CcceeEeceEEEEEEEeC------CCCcEEE
Q 016519 58 LAK---QFC---QLPHLP-FPSSYP-MFVSRAQFIEYLDHYVSHFN---IVPSIRYQRSVESASYDE------ATNMWNV 120 (388)
Q Consensus 58 ~~~---~~~---~~~~~~-~~~~~~-~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~v~~~~~~~------~~~~~~v 120 (388)
.+. .+. .++... ....+. ...++..+.++|.+.+++.+ +.+ ++++++++++.++ +...++|
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v--~~g~~v~~~~~d~~~~~~~~~~~V~v 165 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKV--ERPLIPEKMEIDSSKAEDPEAYPVTM 165 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCE--ECSEEEEEEEECGGGTTCTTCCCEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEE--EeCCEEEEEEecCcccccCCCCCEEE
Confidence 110 000 011000 000111 12578888899988888776 666 9999999998764 1234666
Q ss_pred EEcccC--------------------------------------CCCceeeEEEeeCEEEEeecCCCC
Q 016519 121 KASNLL--------------------------------------SPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 121 ~~~~~~--------------------------------------~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
++.+.. ..|.. .++++|+||.|.|..|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~--~~i~A~~VVGADG~~S~ 231 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEI--ETVHCKYVIGCDGGHSW 231 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCE--EEEEEEEEEECCCTTCH
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCce--EEEEeCEEEeccCCCCH
Confidence 554310 11222 67999999999998664
No 144
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.01 E-value=5.3e-10 Score=103.52 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
+...+.+.+...+++.++++ +++++|+++...+ +.|.|.+.+ .++++|+||+|+|.++
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~~~V~t~~---------g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQV--LCNHEALEIRRVD--GAWEVRCDA---------GSYRAAVLVNAAGAWC 209 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ESSCCCCEEEEET--TEEEEECSS---------EEEEESEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEeC--CeEEEEeCC---------CEEEcCEEEECCChhH
Confidence 44667777778788888776 8899999998876 568888765 6899999999999865
No 145
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.00 E-value=1.5e-09 Score=101.18 Aligned_cols=56 Identities=16% Similarity=0.091 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 81 AQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
..+.+.+.+.+++.++++ +++++|+++...+ +.|.|.+.+ .++++|+||+|+|.++
T Consensus 153 ~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~v~v~t~~---------g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATL--RAGETVTELVPDA--DGVSVTTDR---------GTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEESS---------CEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEE--ECCCEEEEEEEcC--CeEEEEECC---------CEEEcCEEEEcCCcCh
Confidence 456666777777778776 8999999998765 567776643 5799999999999753
No 146
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.98 E-value=2.3e-09 Score=100.11 Aligned_cols=60 Identities=10% Similarity=0.006 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
.+...+.+.+.+.+++.++++ +++++|+++...+ +..+.|.+.+ .++++|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~---------g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDI--IQNCEVTGFIKDG-EKVTGVKTTR---------GTIHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS-SBEEEEEETT---------CCEEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCEE--EcCCeEEEEEEeC-CEEEEEEeCC---------ceEECCEEEECCchhH
Confidence 345577788888888888776 8899999998764 2346677654 5689999999999754
No 147
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.95 E-value=8.9e-09 Score=100.12 Aligned_cols=65 Identities=20% Similarity=0.110 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
+...+...+...+++.+..+ +++++|+++..++ +..+.|.+.+..+ |+. .++++|.||+|+|.++
T Consensus 168 d~~~l~~~L~~~a~~~G~~i--~~~~~V~~l~~~~-g~v~gV~~~d~~t-g~~--~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVA--LNYMKVESFIYDQ-GKVVGVVAKDRLT-DTT--HTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESEEEEEEEEET-TEEEEEEEEETTT-CCE--EEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcC-CeEEEEEEEEcCC-Cce--EEEECCEEEECCCcch
Confidence 34566667777777888877 8999999998865 2335677765322 222 6899999999999865
No 148
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.94 E-value=1.4e-09 Score=105.51 Aligned_cols=62 Identities=8% Similarity=0.099 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
.++..+.+++.+.+++.++.+ +++ +|+++...++...+.|.+.++ .++++|.||.|+|.+|.
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNR--VVD-EVVDVRLNNRGYISNLLTKEG--------RTLEADLFIDCSGMRGL 223 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEETTS--------CEECCSEEEECCGGGCC
T ss_pred EeHHHHHHHHHHHHHHCCCEE--EEe-eEeEEEEcCCCcEEEEEECCC--------cEEEeCEEEECCCCchh
Confidence 456788889988888888776 778 899998754223356777664 58999999999997554
No 149
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.92 E-value=1.8e-08 Score=96.96 Aligned_cols=38 Identities=21% Similarity=0.406 Sum_probs=35.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg 44 (388)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..||
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 48999999999999999999999999999999988765
No 150
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.90 E-value=1.2e-09 Score=102.11 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCY 42 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~ 42 (388)
.+||+|||||++|+++|+.|+++ |++|+|||+....
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 48999999999999999999999 9999999997543
No 151
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.88 E-value=7.9e-09 Score=99.28 Aligned_cols=64 Identities=20% Similarity=0.207 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
+...+...+...+++.++.+ +.+++|+++..++ +.|.|.+.+... |+. .++++|.||+|+|.++
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i--~~~~~V~~l~~~~--~~~~V~~~d~~~-G~~--~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEV--LTRTRATSARREN--GLWIVEAEDIDT-GKK--YSWQARGLVNATGPWV 210 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTT-CCE--EEEEESCEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCcEEEEEEEeC--CEEEEEEEECCC-CCE--EEEECCEEEECCChhH
Confidence 45667777777778888776 8899999998865 668888753211 121 4899999999999865
No 152
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.88 E-value=2.1e-09 Score=94.70 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=38.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~ 48 (388)
+||+||||||+||++|..|+++|++|+|||+.+.+||.+..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 79999999999999999999999999999999999986553
No 153
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.87 E-value=1.2e-08 Score=91.26 Aligned_cols=105 Identities=24% Similarity=0.314 Sum_probs=64.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCC-cccccC-CcCceeeecCC-ccccCCCCCCC--CCCCCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYA-SIWKKY-SYDRLRLHLAK-QFCQLPHLPFP--SSYPMFVS 79 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~g-g~~~~~-~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 79 (388)
.+||+|||||++|+++|..|++. |++|+|+|+.+..| +.|... .+......... .+..-...++. ..+.....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 46999999999999999999998 99999999988876 466422 12222111100 00000011111 01111123
Q ss_pred HHHHHHHHHHHHHhc-CCcceeEeceEEEEEEEeC
Q 016519 80 RAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDE 113 (388)
Q Consensus 80 ~~~~~~~l~~~~~~~-~~~~~~~~~~~v~~~~~~~ 113 (388)
..++...+.+.+... ++++ +.+++|+++..++
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i--~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKL--FNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEE--ETTEEEEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCcEE--Eecceeeeeeecc
Confidence 456667777666664 7666 8889999887753
No 154
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.87 E-value=2e-08 Score=97.99 Aligned_cols=138 Identities=16% Similarity=0.068 Sum_probs=83.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccC--Cc----Cce----ee-ecCCcc-------------
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--SY----DRL----RL-HLAKQF------------- 62 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~--~~----~~~----~~-~~~~~~------------- 62 (388)
.+||+|||+|++|+++|..|++.|++|+|+|+.+..|+..... .+ ..+ .. +.+..+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 4799999999999999999999999999999998777632210 00 000 00 000000
Q ss_pred --------------------ccCCCCC----CCCCCC-------CCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEE
Q 016519 63 --------------------CQLPHLP----FPSSYP-------MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASY 111 (388)
Q Consensus 63 --------------------~~~~~~~----~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~ 111 (388)
...+... ....++ .......+.+.+...+++.++++ +++++|+++..
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i--~~~t~v~~l~~ 283 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDI--RLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeE--EecCEEEEEEE
Confidence 0000000 000000 01235678888888888888877 99999999975
Q ss_pred eCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 112 DEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 112 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
++++..+.|...+.. |+. .++.+|.||+|||.++.
T Consensus 284 ~~~g~v~GV~~~~~~--G~~--~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 284 DASGKVTGVLVKGEY--TGY--YVIKADAVVIAAGGFAK 318 (572)
T ss_dssp C--CCEEEEEEEETT--TEE--EEEECSEEEECCCCCTT
T ss_pred CCCCeEEEEEEEeCC--CcE--EEEEcCEEEEeCCCCcc
Confidence 431233335444211 121 57999999999997553
No 155
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.86 E-value=6.5e-09 Score=97.99 Aligned_cols=37 Identities=30% Similarity=0.385 Sum_probs=35.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg 44 (388)
+||+|||||++|+++|+.|++.|++|+|+|+++.+||
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG 38 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGG 38 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccC
Confidence 6999999999999999999999999999999887776
No 156
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.85 E-value=6.1e-09 Score=101.23 Aligned_cols=62 Identities=15% Similarity=0.200 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHHHhc-CCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 78 VSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 78 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
.++..+.+++.+.+++. ++++ +++ +|+++...++...+.|.+.++ .++++|.||+|+|.+|.
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i--~~~-~V~~i~~~~~g~~~~v~~~~G--------~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRH--VED-RVEHVQRDANGNIESVRTATG--------RVFDADLFVDCSGFRGL 253 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEE--EEC-CEEEEEECTTSCEEEEEETTS--------CEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEE--EEC-eEeEEEEcCCCCEEEEEECCC--------CEEECCEEEECCCCchh
Confidence 56788999999988888 8877 888 999998754223356777664 67999999999997543
No 157
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.84 E-value=1.3e-08 Score=98.10 Aligned_cols=63 Identities=17% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 016519 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (388)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p 151 (388)
.++..+.+.+.+.+++.++++ +++ +|+++..+++...+.|.+.++ .++++|.||.|+|.+|.-
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~~~~~~v~~~~g--------~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRH--VVD-DVQHVGQDERGWISGVHTKQH--------GEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHHCCCEE--EEC-eEeEEEEcCCCCEEEEEECCC--------CEEEcCEEEECCCcchHH
Confidence 467889999988888888776 888 899998754223356777664 589999999999975543
No 158
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.83 E-value=1e-08 Score=99.23 Aligned_cols=62 Identities=13% Similarity=0.206 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHh-cCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 016519 78 VSRAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (388)
Q Consensus 78 ~~~~~~~~~l~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~ 150 (388)
.++..+.+++.+.+++ .++.+ +++ +|+++...++...+.|.+.++ .++++|.||.|+|.+|.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i--~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTH--IRD-HVSQIINNQHGDIEKLITKQN--------GEISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEE--EEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEE--EEe-EEEEEEecCCCcEEEEEECCC--------CEEEcCEEEECCCcchH
Confidence 4678889999988888 78776 788 699998754222345666654 56999999999997554
No 159
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.83 E-value=3.3e-08 Score=96.55 Aligned_cols=43 Identities=21% Similarity=0.308 Sum_probs=37.4
Q ss_pred CcccCCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCC
Q 016519 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYA 43 (388)
Q Consensus 1 m~~~~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~g 43 (388)
|......+||+|||||++|+++|..|++.|.+|+|+|+.+..+
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~ 43 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTR 43 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 4544456899999999999999999999999999999987553
No 160
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.77 E-value=2.2e-08 Score=94.17 Aligned_cols=38 Identities=29% Similarity=0.379 Sum_probs=35.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI 45 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 45 (388)
+||+|||||++|+++|+.|+++|++|+|+|+.+.+||.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~ 38 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGR 38 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCc
Confidence 58999999999999999999999999999999988763
No 161
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.77 E-value=5.5e-08 Score=92.27 Aligned_cols=102 Identities=18% Similarity=0.198 Sum_probs=80.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||||++|+.+|..|++.|.+|+++|+.+.+. + ....++.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------~--~~~~~~~~~ 213 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------------------------------P--TMDLEVSRA 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999976321 0 012466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~ 155 (388)
+.+.+++.++++ +++++|+.++..+ +.+.+.+.++ .++.+|.||+|+|. +|+.+.
T Consensus 214 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~~D~vv~A~G~--~p~~~~ 268 (455)
T 2yqu_A 214 AERVFKKQGLTI--RTGVRVTAVVPEA--KGARVELEGG--------EVLEADRVLVAVGR--RPYTEG 268 (455)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSCE--EECCTT
T ss_pred HHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECCC--------eEEEcCEEEECcCC--CcCCCC
Confidence 777778888877 9999999998765 5566776654 68999999999994 665543
No 162
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.76 E-value=1.5e-08 Score=95.18 Aligned_cols=38 Identities=26% Similarity=0.452 Sum_probs=35.6
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI 45 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 45 (388)
+||+|||||++|+++|+.|+++|++|+|+|+++.+||.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~ 38 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGR 38 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCce
Confidence 48999999999999999999999999999999888773
No 163
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.76 E-value=2.9e-08 Score=101.29 Aligned_cols=58 Identities=14% Similarity=0.101 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCc-EEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNM-WNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
+...+.+.+...+++.++++ +.+++|+++...+ +. +.|.+.+ .++++|+||+|+|.++
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i--~~~t~V~~i~~~~--~~v~~V~t~~---------G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTY--RGSTTVTGIEQSG--GRVTGVQTAD---------GVIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET--TEEEEEEETT---------EEEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--ECCceEEEEEEeC--CEEEEEEECC---------cEEECCEEEECCccch
Confidence 45577778888888888776 8899999998765 44 3566654 6899999999999864
No 164
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.72 E-value=3.1e-08 Score=94.29 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=35.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC------CCEEEEeecCCCCc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS------IPYVILERENCYAS 44 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g------~~v~lie~~~~~gg 44 (388)
++||+|||||++||++|+.|++.| ++|+|+|+.+.+||
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 479999999999999999999999 99999999988876
No 165
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.71 E-value=1e-07 Score=88.39 Aligned_cols=101 Identities=17% Similarity=0.103 Sum_probs=80.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+. +. ....++.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------~~-~~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVM-------------------------------PG-LLHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchh-------------------------------hc-ccCHHHHHH
Confidence 4799999999999999999999999999999976432 00 112466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+.+++.++++ +++++|.+++..+ +.+.|.+.++ .++.+|.||+|+|. +|+.
T Consensus 193 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~g--------~~i~~d~vv~a~G~--~p~~ 245 (384)
T 2v3a_A 193 VQAGLEGLGVRF--HLGPVLASLKKAG--EGLEAHLSDG--------EVIPCDLVVSAVGL--RPRT 245 (384)
T ss_dssp HHHHHHTTTCEE--EESCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSCE--EECC
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEecC--CEEEEEECCC--------CEEECCEEEECcCC--CcCH
Confidence 888888888887 9999999998765 5677877765 68999999999994 5554
No 166
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.68 E-value=8.8e-08 Score=93.33 Aligned_cols=39 Identities=18% Similarity=0.346 Sum_probs=34.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg 44 (388)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 358999999999999999999999999999999874443
No 167
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.67 E-value=7.8e-09 Score=95.80 Aligned_cols=120 Identities=18% Similarity=0.138 Sum_probs=74.6
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCC---Ccc--cccCCcCce-eeecC-Cc-c---------ccC--C
Q 016519 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCY---ASI--WKKYSYDRL-RLHLA-KQ-F---------CQL--P 66 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~---gg~--~~~~~~~~~-~~~~~-~~-~---------~~~--~ 66 (388)
+||+||||||+|+++|..|++. |++|+|+|+.+.. |.. +..+..... ..... .. + ..+ .
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 4899999999999999999999 9999999998765 221 111111100 00000 00 0 000 0
Q ss_pred CCCCCCC--CC-CCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEE
Q 016519 67 HLPFPSS--YP-MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVV 143 (388)
Q Consensus 67 ~~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~ 143 (388)
....... .+ ....+.++.+.+.+.+++.++++ +++++|++++.. .++++|.||.
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~---------------------~~~~ad~vV~ 137 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAI--RFESPLLEHGEL---------------------PLADYDLVVL 137 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEE--ETTCCCCSGGGC---------------------CGGGCSEEEE
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEE--EeCCEeccchhc---------------------ccccCCEEEE
Confidence 0000000 00 12467889999998888888776 888888666421 2246899999
Q ss_pred eecCCCC
Q 016519 144 ASGETSN 150 (388)
Q Consensus 144 AtG~~s~ 150 (388)
|+|.+|.
T Consensus 138 AdG~~S~ 144 (381)
T 3c4a_A 138 ANGVNHK 144 (381)
T ss_dssp CCGGGGG
T ss_pred CCCCCch
Confidence 9998775
No 168
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.67 E-value=1.7e-07 Score=89.07 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=81.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||||+.|+.+|..|++.|.+|+|+|+.+.+. + ....++.+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 215 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-------------------------------P--QGDPETAAL 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4699999999999999999999999999999976431 1 012467777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc-c--cCCCCceeeEEEeeCEEEEeecCCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-N--LLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~-~--~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~ 155 (388)
+.+..++.++++ +++++|+.++..+ +.+.|.+. + +.. .++.+|.||+|+| .+|+...
T Consensus 216 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g~~------~~i~~D~vv~a~G--~~p~~~~ 275 (464)
T 2eq6_A 216 LRRALEKEGIRV--RTKTKAVGYEKKK--DGLHVRLEPAEGGEG------EEVVVDKVLVAVG--RKPRTEG 275 (464)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTCCSC------EEEEESEEEECSC--EEESCTT
T ss_pred HHHHHHhcCCEE--EcCCEEEEEEEeC--CEEEEEEeecCCCce------eEEEcCEEEECCC--cccCCCC
Confidence 888888888887 9999999998765 55667665 4 422 4899999999999 4676543
No 169
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.64 E-value=7.4e-08 Score=93.15 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=34.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg 44 (388)
..+||+|||||++|+++|..|++ |.+|+|+|+.+..++
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 35899999999999999999999 999999999886654
No 170
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.62 E-value=4.2e-07 Score=89.00 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=33.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--CCEEEEeecCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCY 42 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~ 42 (388)
.+||+|||||++|+++|..|++.| .+|+|||+.+..
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 489999999999999999999999 999999997644
No 171
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.61 E-value=1.5e-07 Score=88.97 Aligned_cols=103 Identities=19% Similarity=0.250 Sum_probs=78.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
...+++|||+|+.|+.+|..|++.|.+|+++|+.+.+.. .+ ...++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~-~~~~~~~ 195 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG-------------------------------VY-LDKEFTD 195 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------TT-CCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc-------------------------------cc-CCHHHHH
Confidence 357999999999999999999999999999999764320 00 1246777
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCC
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~ 155 (388)
.+.+.+++.++++ +++++|..++..+ ..+.+.+. + .++.+|.||+|+| .+|+.+.
T Consensus 196 ~l~~~l~~~gv~i--~~~~~v~~i~~~~--~v~~v~~~-~--------~~i~~d~vi~a~G--~~p~~~~ 250 (447)
T 1nhp_A 196 VLTEEMEANNITI--ATGETVERYEGDG--RVQKVVTD-K--------NAYDADLVVVAVG--VRPNTAW 250 (447)
T ss_dssp HHHHHHHTTTEEE--EESCCEEEEECSS--BCCEEEES-S--------CEEECSEEEECSC--EEESCGG
T ss_pred HHHHHHHhCCCEE--EcCCEEEEEEccC--cEEEEEEC-C--------CEEECCEEEECcC--CCCChHH
Confidence 8888888888777 8999999887542 33345553 2 6799999999999 4666543
No 172
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.61 E-value=2e-08 Score=88.99 Aligned_cols=189 Identities=12% Similarity=0.120 Sum_probs=102.4
Q ss_pred CeEEEECCCCCHHHHHHHHHhh-cCeeEEEEecchhhhhHHHh-hcCChhh-HHHHHHHHHHHHhcCccccccCCCCCCc
Q 016519 187 KNVLVVGSGNSGMEIALDLANH-AAKTSLVIRSPMVYLGLVLL-RYVPCGG-VDTLMVMLSRLVYGDLSKYGIHKPREGP 263 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~-~~~v~~~~r~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (388)
.+|+|||+|.+|+.+|..|++. |.+|+++.+.+......... ..+.... .....+++.+ +++.......
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~--------~G~~~~~~~~ 111 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDE--------IGVAYDEQDT 111 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHH--------HTCCCEECSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHH--------cCCCcccCCC
Confidence 4799999999999999999997 99999999987321000000 0000000 0000111111 1111100000
Q ss_pred hhhhhccCCcceeCcchhhhhc-CCcEEEecC--ceEEEc--C---eEEee---------CC-----cEEeccEEEEccC
Q 016519 264 FFMKAAYGKYPVIDAGTCEKIK-SGQIQVLPG--IESIRG--N---EVIFE---------NG-----HSHHFDSIVFCTG 321 (388)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~--v~~~~~--~---~v~~~---------~g-----~~~~~D~vi~atG 321 (388)
.. .......+...+.+.+. ..+++++.+ +.++.. + ++.+. +| .++.+|.||.|+|
T Consensus 112 ~~---~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG 188 (284)
T 1rp0_A 112 YV---VVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCG 188 (284)
T ss_dssp EE---EESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCC
T ss_pred EE---EecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCC
Confidence 00 00001122223444554 468999888 777752 3 34442 32 5789999999999
Q ss_pred CCCCCcccccCCC-------CccCCCCCcCCCC------CCCccCCCceEEEeccccC----------cccchhhHHHHH
Q 016519 322 FKRSTNVWLKGDD-------SMLNDDGIPKQSY------PNHWKGKNGLYCVGLSRKG----------LYGAAADAQNIA 378 (388)
Q Consensus 322 ~~~~~~~~~~~~~-------~~~~~~g~~~~~~------~~~~~~~~~vy~~Gd~~~~----------~~~a~~~~~~~a 378 (388)
..++...+..... .+....|. .++. +...+..|++|++|++... ...+..+|..+|
T Consensus 189 ~~s~~~~~~~~~~~~~g~~~~v~~~~g~-~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a 267 (284)
T 1rp0_A 189 HDGPFGATGVKRLKSIGMIDHVPGMKAL-DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAG 267 (284)
T ss_dssp SSSTTTTHHHHHHHHTTSSSCCCCCEEE-CHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHhhhccCCCCcCCcCCc-hhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHH
Confidence 9887644322110 11112221 1110 0123456999999988531 236778999999
Q ss_pred HHhhhccCC
Q 016519 379 DHINSILSP 387 (388)
Q Consensus 379 ~~i~~~l~~ 387 (388)
.+|.++|..
T Consensus 268 ~~i~~~l~~ 276 (284)
T 1rp0_A 268 QLALKALGL 276 (284)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhhh
Confidence 999998754
No 173
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.60 E-value=3.9e-07 Score=86.39 Aligned_cols=104 Identities=14% Similarity=0.159 Sum_probs=79.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ...++.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 216 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-------------------------------SG--FEKQMAAI 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4799999999999999999999999999999976431 10 12466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|..++..+ +.+.+.+.+. ++. .++.+|.||+|+| .+|+..
T Consensus 217 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~---g~~--~~~~~D~vv~a~G--~~p~~~ 273 (455)
T 1ebd_A 217 IKKRLKKKGVEV--VTNALAKGAEERE--DGVTVTYEAN---GET--KTIDADYVLVTVG--RRPNTD 273 (455)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEET--TEEEEEEEET---TEE--EEEEESEEEECSC--EEESCS
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEEeC---Cce--eEEEcCEEEECcC--CCcccC
Confidence 777788888887 9999999998754 4455665421 111 6799999999999 466543
No 174
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.59 E-value=4.1e-07 Score=89.06 Aligned_cols=37 Identities=24% Similarity=0.265 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYA 43 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~g 43 (388)
.+||+|||||++|+++|..|++.|.+|+|+|+....+
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~ 54 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTR 54 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 4799999999999999999999999999999976443
No 175
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.58 E-value=1.3e-07 Score=89.63 Aligned_cols=33 Identities=30% Similarity=0.452 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC-CCEEEEeec
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILERE 39 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g-~~v~lie~~ 39 (388)
.+||+|||||++|+++|+.|+++| .+|+|||+.
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 479999999999999999999999 999999993
No 176
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.58 E-value=3.4e-07 Score=86.93 Aligned_cols=101 Identities=18% Similarity=0.092 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||||+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 212 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------FQ--FDPLLSAT 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4689999999999999999999999999999876321 10 11356677
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeE-EEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEE-YYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|+.++..+ +.+.|.+.++ . ++.+|.||+|+| .+|+..
T Consensus 213 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~G--------~~~i~~D~vv~a~G--~~p~~~ 267 (463)
T 2r9z_A 213 LAENMHAQGIET--HLEFAVAALERDA--QGTTLVAQDG--------TRLEGFDSVIWAVG--RAPNTR 267 (463)
T ss_dssp HHHHHHHTTCEE--ESSCCEEEEEEET--TEEEEEETTC--------CEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEeCC--------cEEEEcCEEEECCC--CCcCCC
Confidence 777788888887 9999999998764 4477887764 5 799999999999 466654
No 177
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.57 E-value=5.3e-07 Score=90.46 Aligned_cols=38 Identities=39% Similarity=0.554 Sum_probs=35.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg 44 (388)
.+||+|||||++|+++|..|++.|++|+|+|+.+..||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 57999999999999999999999999999999887776
No 178
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.57 E-value=2.8e-08 Score=95.78 Aligned_cols=46 Identities=26% Similarity=0.512 Sum_probs=39.3
Q ss_pred CcccCCCCeEEEECCChHHHHHHHHHhhc-CCCEEEEeecCCCCccc
Q 016519 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYASIW 46 (388)
Q Consensus 1 m~~~~~~~dv~IIGaG~aGl~~A~~l~~~-g~~v~lie~~~~~gg~~ 46 (388)
|+.+...+||+|||||++||+||..|+++ |++|+|+|+++.+||.-
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 45444568999999999999999999985 99999999999999943
No 179
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.57 E-value=4e-07 Score=86.89 Aligned_cols=108 Identities=16% Similarity=0.238 Sum_probs=80.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG-------------------------------A--SMDGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------S--SSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc-------------------------------c--ccCHHHHHH
Confidence 4699999999999999999999999999999987432 1 012467778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|+.++..++++.+.|.+.+... ++. .++.+|.||+|+| .+|+..
T Consensus 230 l~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~-g~~--~~~~~D~vv~a~G--~~p~~~ 290 (478)
T 1v59_A 230 TQKFLKKQGLDF--KLSTKVISAKRNDDKNVVEIVVEDTKT-NKQ--ENLEAEVLLVAVG--RRPYIA 290 (478)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEETTTTEEEEEEEETTT-TEE--EEEEESEEEECSC--EEECCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEecCCCeEEEEEEEcCC-CCc--eEEECCEEEECCC--CCcCCC
Confidence 888888888887 999999999863112456666652100 111 6799999999999 466654
No 180
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.57 E-value=3.6e-07 Score=86.45 Aligned_cols=102 Identities=14% Similarity=0.067 Sum_probs=80.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------------------------------PS--FDPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------------------------------hh--hhHHHHHH
Confidence 4699999999999999999999999999999876321 10 11356777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+.+++.++++ +++++|.+++..+ ++.+.|.+.++ .++.+|.||+|+| .+|+..
T Consensus 214 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g--------~~i~~D~vv~a~G--~~p~~~ 268 (450)
T 1ges_A 214 LVEVMNAEGPQL--HTNAIPKAVVKNT-DGSLTLELEDG--------RSETVDCLIWAIG--REPAND 268 (450)
T ss_dssp HHHHHHHHSCEE--ECSCCEEEEEECT-TSCEEEEETTS--------CEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC-CcEEEEEECCC--------cEEEcCEEEECCC--CCcCCC
Confidence 777788888887 9999999998654 23467777765 6899999999999 466654
No 181
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.55 E-value=7.3e-07 Score=87.92 Aligned_cols=36 Identities=17% Similarity=0.333 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~ 42 (388)
.+||+|||||.+|+++|..|++.|.+|+|+|+.+..
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 489999999999999999999999999999998754
No 182
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.55 E-value=2.5e-07 Score=84.75 Aligned_cols=43 Identities=30% Similarity=0.366 Sum_probs=39.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeec-CCCCcccc
Q 016519 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERE-NCYASIWK 47 (388)
Q Consensus 5 ~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~-~~~gg~~~ 47 (388)
...+||+|||||++||++|..|.+.|++|+|+|++ +.+||.|.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIK 85 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCcee
Confidence 34689999999999999999999999999999999 89998665
No 183
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.55 E-value=5.2e-07 Score=86.92 Aligned_cols=101 Identities=12% Similarity=-0.000 Sum_probs=82.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
+.+++|||||+.|+.+|..+++.|.+|+++++...+. . ...++.+.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~--------------------------------~--~D~ei~~~ 268 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR--------------------------------G--FDQQCAVK 268 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST--------------------------------T--SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc--------------------------------c--cchhHHHH
Confidence 4689999999999999999999999999998754221 1 12567788
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~ 155 (388)
++...++.++.+ +.+..+..+...+ +...|.+.++ .++.+|.|++|+| -+|+...
T Consensus 269 l~~~l~~~gi~~--~~~~~v~~~~~~~--~~~~v~~~~~--------~~~~~D~vLvAvG--R~Pnt~~ 323 (542)
T 4b1b_A 269 VKLYMEEQGVMF--KNGILPKKLTKMD--DKILVEFSDK--------TSELYDTVLYAIG--RKGDIDG 323 (542)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEESCGG
T ss_pred HHHHHHhhccee--ecceEEEEEEecC--CeEEEEEcCC--------CeEEEEEEEEccc--ccCCccc
Confidence 888888889887 9999999998876 6677777765 6788999999999 4777643
No 184
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.53 E-value=2.3e-07 Score=91.50 Aligned_cols=36 Identities=14% Similarity=0.236 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhc------CCCEEEEeecCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ------SIPYVILERENCY 42 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~------g~~v~lie~~~~~ 42 (388)
.+||+|||||++|+++|..|++. |.+|+|+|+....
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 48999999999999999999998 9999999997643
No 185
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.52 E-value=7.2e-07 Score=83.49 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=80.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + -....++.++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l-------------------------------~-~~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL-------------------------------A-RVAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------T-TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh-------------------------------h-hhcCHHHHHH
Confidence 4689999999999999999999999999999976431 0 0123567788
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++.++++ +++++|..+...+ +....|.+.++ .++.+|.||+|+| .+|+.
T Consensus 200 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~v~l~dG--------~~i~aD~Vv~a~G--~~p~~ 253 (415)
T 3lxd_A 200 YQAEHRAHGVDL--RTGAAMDCIEGDG-TKVTGVRMQDG--------SVIPADIVIVGIG--IVPCV 253 (415)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEESS-SBEEEEEESSS--------CEEECSEEEECSC--CEESC
T ss_pred HHHHHHhCCCEE--EECCEEEEEEecC-CcEEEEEeCCC--------CEEEcCEEEECCC--CccCh
Confidence 888888889887 9999999998653 22235777765 6899999999999 46654
No 186
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.51 E-value=2.6e-07 Score=87.69 Aligned_cols=102 Identities=16% Similarity=0.153 Sum_probs=77.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 217 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-------------------------------P--TYDSELTAP 217 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4699999999999999999999999999999987432 1 012456677
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~ 155 (388)
+.+..++.++++ +++++|+.++. + + +.+...++.. .++.+|.||+|+| .+|+.+.
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~-~--~-v~v~~~~G~~------~~i~~D~vv~a~G--~~p~~~~ 272 (458)
T 1lvl_A 218 VAESLKKLGIAL--HLGHSVEGYEN-G--C-LLANDGKGGQ------LRLEADRVLVAVG--RRPRTKG 272 (458)
T ss_dssp HHHHHHHHTCEE--ETTCEEEEEET-T--E-EEEECSSSCC------CEECCSCEEECCC--EEECCSS
T ss_pred HHHHHHHCCCEE--EECCEEEEEEe-C--C-EEEEECCCce------EEEECCEEEECcC--CCcCCCC
Confidence 777778888887 89999999875 3 3 4455323321 5799999999999 5776553
No 187
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.50 E-value=6.8e-07 Score=85.05 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=78.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ...++.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHH
Confidence 4699999999999999999999999999999876321 1 12467778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+.+++.++++ +++++|.+++.++ +.+.|.+.+ .++.+|.||+|+|. +|+.
T Consensus 222 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~---------~~i~aD~Vv~a~G~--~p~~ 273 (467)
T 1zk7_A 222 VTAAFRAEGIEV--LEHTQASQVAHMD--GEFVLTTTH---------GELRADKLLVATGR--TPNT 273 (467)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEEET--TEEEEEETT---------EEEEESEEEECSCE--EESC
T ss_pred HHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEECC---------cEEEcCEEEECCCC--CcCC
Confidence 888888888887 8999999998754 556676653 78999999999994 6654
No 188
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=1.1e-06 Score=84.24 Aligned_cols=102 Identities=17% Similarity=0.094 Sum_probs=79.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------R--KFDESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-------------------------------c--ccchhhHHH
Confidence 4689999999999999999999999999999876431 1 012466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEE-EeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY-YSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|..++..+ ++.+.|.+.++ .+ +.+|.||+|+| .+|+..
T Consensus 223 l~~~l~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g--------~~~~~~D~vi~a~G--~~p~~~ 278 (500)
T 1onf_A 223 LENDMKKNNINI--VTFADVVEIKKVS-DKNLSIHLSDG--------RIYEHFDHVIYCVG--RSPDTE 278 (500)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEESS-TTCEEEEETTS--------CEEEEESEEEECCC--BCCTTT
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcC-CceEEEEECCC--------cEEEECCEEEECCC--CCcCCC
Confidence 888888888887 9999999998653 23367777664 44 99999999999 467653
No 189
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.49 E-value=8.1e-07 Score=84.43 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=79.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 217 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------PN--EDADVSKE 217 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4699999999999999999999999999999976431 10 12467777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc-ccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|..++..+ +...+.+. ++.. .++.+|.||+|+| .+|+..
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~g~~------~~~~~D~vv~a~G--~~p~~~ 274 (464)
T 2a8x_A 218 IEKQFKKLGVTI--LTATKVESIADGG--SQVTVTVTKDGVA------QELKAEKVLQAIG--FAPNVE 274 (464)
T ss_dssp HHHHHHHHTCEE--ECSCEEEEEEECS--SCEEEEEESSSCE------EEEEESEEEECSC--EEECCS
T ss_pred HHHHHHHcCCEE--EeCcEEEEEEEcC--CeEEEEEEcCCce------EEEEcCEEEECCC--CCccCC
Confidence 888888888887 9999999998654 44556654 3321 6799999999999 466654
No 190
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.48 E-value=8e-07 Score=82.98 Aligned_cols=97 Identities=20% Similarity=0.276 Sum_probs=76.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLM-------------------------------SR-AAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-------------------------------cc-ccCHHHHHH
Confidence 4799999999999999999999999999999976431 00 012456777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++.++++ +++++|..++ + + .|.+.++ .++.+|.||+|+|. +|+.
T Consensus 193 l~~~l~~~GV~i--~~~~~v~~i~--~--~--~v~~~~g--------~~i~~D~vi~a~G~--~p~~ 241 (408)
T 2gqw_A 193 VARYHAAQGVDL--RFERSVTGSV--D--G--VVLLDDG--------TRIAADMVVVGIGV--LAND 241 (408)
T ss_dssp HHHHHHHTTCEE--EESCCEEEEE--T--T--EEEETTS--------CEEECSEEEECSCE--EECC
T ss_pred HHHHHHHcCcEE--EeCCEEEEEE--C--C--EEEECCC--------CEEEcCEEEECcCC--CccH
Confidence 788888888887 9999999887 3 3 4777665 68999999999994 6653
No 191
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.48 E-value=1.2e-06 Score=83.59 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=79.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 225 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG-------------------------------GV-GIDMEISKN 225 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------CS-SCCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC-------------------------------Cc-ccCHHHHHH
Confidence 4699999999999999999999999999999976431 00 012467778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCc-EEEEEc---ccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNM-WNVKAS---NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~v~~~---~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|..++..+ +. +.+... .++. .++.+|.||+|+| .+|+..
T Consensus 226 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~~~~v~~~~~~~~~~------~~i~~D~vv~a~G--~~p~~~ 285 (474)
T 1zmd_A 226 FQRILQKQGFKF--KLNTKVTGATKKS--DGKIDVSIEAASGGKA------EVITCDVLLVCIG--RRPFTK 285 (474)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEECT--TSCEEEEEEETTSCCC------EEEEESEEEECSC--EEECCT
T ss_pred HHHHHHHCCCEE--EeCceEEEEEEcC--CceEEEEEEecCCCCc------eEEEcCEEEECcC--CCcCCC
Confidence 888888888887 9999999998754 33 556643 1221 6899999999999 466654
No 192
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.48 E-value=3.6e-07 Score=85.99 Aligned_cols=103 Identities=24% Similarity=0.272 Sum_probs=71.9
Q ss_pred CeEEEECCCCCHHHHHHHHHhhc--CeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHA--AKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPF 264 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (388)
|+|+|||+|..|+.+|..|++.+ .+|+++.+++.+.+.+ .+... ..+..+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p--------~l~~v--------~~g~~~~----------- 55 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP--------AFPHL--------AMGWRKF----------- 55 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG--------GHHHH--------HHTCSCG-----------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCc--------cHHHH--------hcCCCCH-----------
Confidence 68999999999999999999876 5799999998442211 00000 0000000
Q ss_pred hhhhccCCcceeCcchhhhhcCCcEEEecC-ceEEEcC--eEEeeCCcEEeccEEEEccCCCCC
Q 016519 265 FMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRS 325 (388)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~ 325 (388)
..+...+.+.+++.+++++.+ ++.++.+ .|.+++|+++++|.+|+|||.++.
T Consensus 56 ---------~~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 56 ---------EDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ---------GGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred ---------HHhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 011112234556678999888 9999854 689999999999999999998753
No 193
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.48 E-value=1.8e-06 Score=82.61 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=81.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 244 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL-------------------------------G--GMDGEVAKQ 244 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------S--SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc-------------------------------c--cCCHHHHHH
Confidence 4689999999999999999999999999999876432 1 012466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|..++..+ +...+.+.+... |+. .++.+|.||+|+| .+|+..
T Consensus 245 l~~~l~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~i~~D~Vi~a~G--~~p~~~ 303 (491)
T 3urh_A 245 LQRMLTKQGIDF--KLGAKVTGAVKSG--DGAKVTFEPVKG-GEA--TTLDAEVVLIATG--RKPSTD 303 (491)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTS-CCC--EEEEESEEEECCC--CEECCT
T ss_pred HHHHHHhCCCEE--EECCeEEEEEEeC--CEEEEEEEecCC-Cce--EEEEcCEEEEeeC--CccCCC
Confidence 777788888887 8999999998765 556666664211 111 6899999999999 466654
No 194
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.48 E-value=1.2e-06 Score=86.40 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=32.9
Q ss_pred CCeEEEECCChHHHHHHHHHh---h-cCCCEEEEeecCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLS---L-QSIPYVILERENCY 42 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~---~-~g~~v~lie~~~~~ 42 (388)
.+||+|||||++|+++|..|+ + .|.+|+|+|+.+..
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 489999999999999999999 6 89999999998743
No 195
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.48 E-value=1.6e-06 Score=82.06 Aligned_cols=102 Identities=15% Similarity=0.184 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.. ...++.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~-~d~~~~~~ 194 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL-------------------------------PKY-FDKEMVAE 194 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TTT-CCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc-------------------------------ccc-CCHHHHHH
Confidence 4689999999999999999999999999999976431 000 12567778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~ 155 (388)
+.+.+++.++++ +++++|..++..+ +.+.|.+.+ .++.+|.||+|+| .+|+...
T Consensus 195 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~---------g~i~aD~Vv~A~G--~~p~~~~ 248 (452)
T 3oc4_A 195 VQKSLEKQAVIF--HFEETVLGIEETA--NGIVLETSE---------QEISCDSGIFALN--LHPQLAY 248 (452)
T ss_dssp HHHHHHTTTEEE--EETCCEEEEEECS--SCEEEEESS---------CEEEESEEEECSC--CBCCCSS
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEccC--CeEEEEECC---------CEEEeCEEEECcC--CCCChHH
Confidence 888888888877 9999999998654 455666643 5789999999999 4676543
No 196
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.47 E-value=6.3e-07 Score=85.32 Aligned_cols=103 Identities=14% Similarity=0.208 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~--~~~~~~~~~ 223 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-------------------------------P--TMDAEIRKQ 223 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--cccHHHHHH
Confidence 4699999999999999999999999999999976432 1 012467778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc---ccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS---NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~---~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|..++.++ +.+.+.+. ++.. .++.+|.||+|+|. +|+..
T Consensus 224 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g~~------~~~~~D~vv~a~G~--~p~~~ 282 (470)
T 1dxl_A 224 FQRSLEKQGMKF--KLKTKVVGVDTSG--DGVKLTVEPSAGGEQ------TIIEADVVLVSAGR--TPFTS 282 (470)
T ss_dssp HHHHHHHSSCCE--ECSEEEEEEECSS--SSEEEEEEESSSCCC------EEEEESEEECCCCE--EECCT
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEEcC--CeEEEEEEecCCCcc------eEEECCEEEECCCC--CcCCC
Confidence 888888889887 9999999998654 44666654 3322 68999999999994 66543
No 197
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.47 E-value=7.6e-07 Score=83.03 Aligned_cols=102 Identities=20% Similarity=0.186 Sum_probs=79.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + -....++.+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~-------------------------------~-~~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM-------------------------------A-RVVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-------------------------------T-TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch-------------------------------h-hccCHHHHHH
Confidence 4689999999999999999999999999999876331 0 0122567778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++.++++ +++++|..+...+ +....|.+.++ .++.+|.||+|+|. +|+.
T Consensus 190 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~V~~~dG--------~~i~aD~Vv~a~G~--~p~~ 243 (404)
T 3fg2_P 190 FHDRHSGAGIRM--HYGVRATEIAAEG-DRVTGVVLSDG--------NTLPCDLVVVGVGV--IPNV 243 (404)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEEET-TEEEEEEETTS--------CEEECSEEEECCCE--EECC
T ss_pred HHHHHHhCCcEE--EECCEEEEEEecC-CcEEEEEeCCC--------CEEEcCEEEECcCC--ccCH
Confidence 888888889887 8999999998754 22335777775 68999999999994 6654
No 198
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.47 E-value=2.8e-07 Score=86.11 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~--------------------------------~~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR--------------------------------VLGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH--------------------------------HHCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh--------------------------------hcCHHHHHH
Confidence 468999999999999999999999999999987643100 011466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++.++++ +++++|..++.++ ....|.+.++ .++.+|.||+|+|. +|+.
T Consensus 191 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~~~v~~~dg--------~~i~aD~Vv~a~G~--~p~~ 243 (410)
T 3ef6_A 191 LRGLLTELGVQV--ELGTGVVGFSGEG--QLEQVMASDG--------RSFVADSALICVGA--EPAD 243 (410)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEECSS--SCCEEEETTS--------CEEECSEEEECSCE--EECC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEeccC--cEEEEEECCC--------CEEEcCEEEEeeCC--eecH
Confidence 888888889887 8999999987643 4456888775 78999999999994 6654
No 199
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.46 E-value=1.1e-06 Score=83.63 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=78.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 220 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-------------------------------P--TLDEDVTNA 220 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-------------------------------c--cCCHHHHHH
Confidence 4699999999999999999999999999999976431 1 012456777
Q ss_pred HHHHH-HhcCCcceeEeceEEEEEEEeCCCCcEEEEEc--ccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYV-SHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+.. ++.++++ +++++|..++..+ +.+.+.+. ++ +. .++.+|.||+|+| .+|+..
T Consensus 221 l~~~l~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~g----~~--~~i~~D~vv~a~G--~~p~~~ 279 (468)
T 2qae_A 221 LVGALAKNEKMKF--MTSTKVVGGTNNG--DSVSLEVEGKNG----KR--ETVTCEALLVSVG--RRPFTG 279 (468)
T ss_dssp HHHHHHHHTCCEE--ECSCEEEEEEECS--SSEEEEEECC-------E--EEEEESEEEECSC--EEECCT
T ss_pred HHHHHhhcCCcEE--EeCCEEEEEEEcC--CeEEEEEEcCCC----ce--EEEECCEEEECCC--cccCCC
Confidence 77777 8888887 9999999998754 44666665 33 11 5799999999999 466543
No 200
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.45 E-value=9.7e-07 Score=83.01 Aligned_cols=102 Identities=15% Similarity=0.186 Sum_probs=78.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL-------------------------------ER-VTAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-------------------------------cc-hhhHHHHHH
Confidence 4699999999999999999999999999999876321 00 012456677
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEE--eCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASY--DEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+...+++.++++ +++++|..++. .+ +....|.+.++ .++.+|.||+|+|. +|+.
T Consensus 197 l~~~l~~~GV~i--~~~~~v~~i~~~~~~-~~v~~v~~~~G--------~~i~~D~Vv~a~G~--~p~~ 252 (431)
T 1q1r_A 197 YEHLHREAGVDI--RTGTQVCGFEMSTDQ-QKVTAVLCEDG--------TRLPADLVIAGIGL--IPNC 252 (431)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECTTT-CCEEEEEETTS--------CEEECSEEEECCCE--EECC
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEeccCC-CcEEEEEeCCC--------CEEEcCEEEECCCC--CcCc
Confidence 777788888887 89999999886 32 22335777665 68999999999994 5653
No 201
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.45 E-value=3e-07 Score=86.68 Aligned_cols=105 Identities=17% Similarity=0.267 Sum_probs=74.3
Q ss_pred CeEEEECCCCCHHHHHHHHHh---hcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCc
Q 016519 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGP 263 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~---~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (388)
++|+|||+|.+|+.+|..|++ .+.+|+++.+++.+.+.+.. ..+ ..+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~---------~~~-------~~g~~------------ 56 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSN---------PWV-------GVGWK------------ 56 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGH---------HHH-------HHTSS------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCc---------ccc-------ccCcc------------
Confidence 589999999999999999999 78899999999844221100 000 00000
Q ss_pred hhhhhccCCcceeCcchhhhhcCCcEEEecC-ceEEEcC--eEEeeCCcEEeccEEEEccCCCCCCc
Q 016519 264 FFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 327 (388)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 327 (388)
....+...+.+.+++.+++++.+ ++.++.+ .|.+++|+++.+|.+|+|||.+|+.+
T Consensus 57 --------~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 57 --------ERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFE 115 (437)
T ss_dssp --------CHHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECGG
T ss_pred --------CHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCcc
Confidence 00112223345666778888877 8888865 68888999999999999999988763
No 202
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.44 E-value=5.2e-07 Score=86.19 Aligned_cols=104 Identities=13% Similarity=0.035 Sum_probs=78.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-------------------------------Q--GADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------c--ccCHHHHHH
Confidence 4699999999999999999999999999999976431 1 012466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++.++++ +++++|..++..+ +...|.+.+.. ++. .++.+|.||+|+| .+|+.
T Consensus 232 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~--~~g--~~~~~D~vv~a~G--~~p~~ 288 (482)
T 1ojt_A 232 WQKQNEYRFDNI--MVNTKTVAVEPKE--DGVYVTFEGAN--APK--EPQRYDAVLVAAG--RAPNG 288 (482)
T ss_dssp HHHHHGGGEEEE--ECSCEEEEEEEET--TEEEEEEESSS--CCS--SCEEESCEEECCC--EEECG
T ss_pred HHHHHHhcCCEE--EECCEEEEEEEcC--CeEEEEEeccC--CCc--eEEEcCEEEECcC--CCcCC
Confidence 888888888777 9999999998764 45666665410 000 5678999999999 46664
No 203
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.44 E-value=1.5e-06 Score=83.11 Aligned_cols=105 Identities=17% Similarity=0.163 Sum_probs=78.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 220 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA-------------------------------N--LQDEEMKRY 220 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT-------------------------------T--CCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------c--cCCHHHHHH
Confidence 4699999999999999999999999999999987432 0 012456677
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~~ 155 (388)
+.+..++. +++ +++++|..++..+ +...+.+.+.+ |+. .++.+|.||+|+| .+|+...
T Consensus 221 l~~~l~~~-V~i--~~~~~v~~i~~~~--~~v~v~~~~~~--G~~--~~i~~D~Vi~a~G--~~p~~~~ 278 (492)
T 3ic9_A 221 AEKTFNEE-FYF--DAKARVISTIEKE--DAVEVIYFDKS--GQK--TTESFQYVLAATG--RKANVDK 278 (492)
T ss_dssp HHHHHHTT-SEE--ETTCEEEEEEECS--SSEEEEEECTT--CCE--EEEEESEEEECSC--CEESCSS
T ss_pred HHHHHhhC-cEE--EECCEEEEEEEcC--CEEEEEEEeCC--Cce--EEEECCEEEEeeC--CccCCCC
Confidence 77766665 665 8899999998765 55666665211 222 6899999999999 4666543
No 204
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.44 E-value=1.3e-06 Score=83.77 Aligned_cols=101 Identities=15% Similarity=0.166 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 228 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------PY--EDADAALV 228 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------CC--SSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4689999999999999999999999999999876431 10 12467778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+.+++.++++ +++++|+.++..+ +.+.|.+.++ .++.+|.||+|+|. +|+..
T Consensus 229 l~~~l~~~GV~i--~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~aD~Vv~a~G~--~p~~~ 282 (499)
T 1xdi_A 229 LEESFAERGVRL--FKNARAASVTRTG--AGVLVTMTDG--------RTVEGSHALMTIGS--VPNTS 282 (499)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEECS--SSEEEEETTS--------CEEEESEEEECCCE--EECCS
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CEEEEEECCC--------cEEEcCEEEECCCC--CcCCC
Confidence 888888889887 9999999998654 4566666554 68999999999994 66543
No 205
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.44 E-value=1.3e-06 Score=83.55 Aligned_cols=102 Identities=12% Similarity=0.038 Sum_probs=80.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhc---CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~---g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (388)
..+++|||+|+.|+.+|..|.+. |.+|+++++.+.+. +. ...++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~ 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-------------------------------RG--FDSEL 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-------------------------------TT--SCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-------------------------------cc--cCHHH
Confidence 46999999999999999999999 99999999976431 10 12466
Q ss_pred HHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
.+.+.+.+++.++++ +++++|..++..+ ++.+.|.+.++ .++.+|.||+|+| .+|+..
T Consensus 234 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G--------~~i~~D~vv~a~G--~~p~~~ 291 (490)
T 1fec_A 234 RKQLTEQLRANGINV--RTHENPAKVTKNA-DGTRHVVFESG--------AEADYDVVMLAIG--RVPRSQ 291 (490)
T ss_dssp HHHHHHHHHHTTEEE--EETCCEEEEEECT-TSCEEEEETTS--------CEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEECCC--------cEEEcCEEEEccC--CCcCcc
Confidence 777888888888877 9999999998654 23467777764 5899999999999 466653
No 206
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.43 E-value=1.3e-06 Score=84.38 Aligned_cols=100 Identities=15% Similarity=0.155 Sum_probs=79.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (388)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------LI--KDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------TC--CSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------cc--ccHHHHHHH
Confidence 799999999999999999999999999999976331 10 124677788
Q ss_pred HHHHHhcCCcceeEeceEEEEEEEeCCCCc---EEEEEcccCCCCceeeE-EEeeCEEEEeecCCCCCCC
Q 016519 88 DHYVSHFNIVPSIRYQRSVESASYDEATNM---WNVKASNLLSPGRVIEE-YYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~v~~~~~~~~~~~~~~-~~~~d~li~AtG~~s~p~~ 153 (388)
...+++.++++ +++++|+++...+ ++. +.|.+.++ . ++.+|.||+|+|. +|+.
T Consensus 262 ~~~l~~~GV~i--~~~~~V~~i~~~~-~~~v~~~~v~~~~G--------~~~i~aD~Vv~A~G~--~p~~ 318 (523)
T 1mo9_A 262 LDRMKEQGMEI--ISGSNVTRIEEDA-NGRVQAVVAMTPNG--------EMRIETDFVFLGLGE--QPRS 318 (523)
T ss_dssp HHHHHHTTCEE--ESSCEEEEEEECT-TSBEEEEEEEETTE--------EEEEECSCEEECCCC--EECC
T ss_pred HHHHHhCCcEE--EECCEEEEEEEcC-CCceEEEEEEECCC--------cEEEEcCEEEECcCC--ccCC
Confidence 88888889887 9999999998654 222 66777664 4 8999999999994 6654
No 207
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.43 E-value=8.5e-07 Score=84.64 Aligned_cols=100 Identities=20% Similarity=0.292 Sum_probs=77.0
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~ 231 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------------------------IYDGDMAE 231 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------------------------SSCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------------------------cCCHHHHH
Confidence 357999999999999999999999999999998763320 01246677
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
.+.+.+++.++++ +++++|+.++.++ ..+.+.+.+ .++.+|.||+|+|. +|+.
T Consensus 232 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~--~v~~v~~~~---------~~i~~D~vi~a~G~--~p~~ 284 (480)
T 3cgb_A 232 YIYKEADKHHIEI--LTNENVKAFKGNE--RVEAVETDK---------GTYKADLVLVSVGV--KPNT 284 (480)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--BEEEEEETT---------EEEECSEEEECSCE--EESC
T ss_pred HHHHHHHHcCcEE--EcCCEEEEEEcCC--cEEEEEECC---------CEEEcCEEEECcCC--CcCh
Confidence 7888888888887 8899999887542 333455532 68999999999994 5554
No 208
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.42 E-value=1.4e-06 Score=82.42 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=77.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 196 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL-------------------------------YK-YFDKEFTDI 196 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh-------------------------------hh-hhhhhHHHH
Confidence 4689999999999999999999999999999876321 00 012467778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+....++.++++ +++++|+.++..+ +.+.....++ .++.+|.||+|+| .+|+..
T Consensus 197 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~v~~v~~~g--------~~i~~D~vv~a~G--~~p~~~ 250 (452)
T 2cdu_A 197 LAKDYEAHGVNL--VLGSKVAAFEEVD--DEIITKTLDG--------KEIKSDIAILCIG--FRPNTE 250 (452)
T ss_dssp HHHHHHHTTCEE--EESSCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCC--EEECCG
T ss_pred HHHHHHHCCCEE--EcCCeeEEEEcCC--CeEEEEEeCC--------CEEECCEEEECcC--CCCCHH
Confidence 888888889887 9999999998643 4443222333 6899999999999 466644
No 209
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.42 E-value=1.5e-06 Score=83.19 Aligned_cols=102 Identities=15% Similarity=0.047 Sum_probs=80.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhc---CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~---g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (388)
..+++|||+|+.|+.+|..|.+. |.+|+++++.+.+. +. ...++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~ 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-------------------------------RG--FDETI 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-------------------------------TT--SCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-------------------------------cc--cCHHH
Confidence 46999999999999999999999 99999999876331 10 12456
Q ss_pred HHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
.+.+.+.+++.++++ +++++|..++..+ ++.+.|.+.++ .++.+|.||+|+| .+|+..
T Consensus 238 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G--------~~i~~D~vv~a~G--~~p~~~ 295 (495)
T 2wpf_A 238 REEVTKQLTANGIEI--MTNENPAKVSLNT-DGSKHVTFESG--------KTLDVDVVMMAIG--RIPRTN 295 (495)
T ss_dssp HHHHHHHHHHTTCEE--EESCCEEEEEECT-TSCEEEEETTS--------CEEEESEEEECSC--EEECCG
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CceEEEEECCC--------cEEEcCEEEECCC--Cccccc
Confidence 777888888888887 9999999998653 23467777765 6899999999999 466653
No 210
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.42 E-value=1.2e-06 Score=83.45 Aligned_cols=101 Identities=19% Similarity=0.234 Sum_probs=79.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~-g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (388)
..+++|||+|+.|+.+|..|.+. |.+|+++++.+.+. +. ....++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM-------------------------------PG-FTSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS-------------------------------TT-TSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc-------------------------------cc-ccCHHHHH
Confidence 46999999999999999999999 99999999876321 10 01246777
Q ss_pred HHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
.+.+.+++.++++ +++++|..++..+ +.+.+.+.++ .++.+|.||+|+|. +|+.
T Consensus 207 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~g--------~~i~aD~Vv~a~G~--~p~~ 260 (472)
T 3iwa_A 207 MLRHDLEKNDVVV--HTGEKVVRLEGEN--GKVARVITDK--------RTLDADLVILAAGV--SPNT 260 (472)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEESS--------CEEECSEEEECSCE--EECC
T ss_pred HHHHHHHhcCCEE--EeCCEEEEEEccC--CeEEEEEeCC--------CEEEcCEEEECCCC--CcCH
Confidence 8888888888887 8999999998744 5666777665 68999999999994 5653
No 211
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.41 E-value=1.3e-06 Score=83.60 Aligned_cols=101 Identities=15% Similarity=0.217 Sum_probs=76.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. ....++.+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 241 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL-------------------------------AG-YYDRDLTDL 241 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh-------------------------------hh-HHHHHHHHH
Confidence 5799999999999999999999999999999976331 00 012467778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|+.++.+ +....+.+ ++ .++.+|.||+|+| .+|+.+
T Consensus 242 l~~~l~~~GV~i--~~~~~v~~i~~~--~~v~~v~~-~g--------~~i~~D~Vi~a~G--~~p~~~ 294 (490)
T 2bc0_A 242 MAKNMEEHGIQL--AFGETVKEVAGN--GKVEKIIT-DK--------NEYDVDMVILAVG--FRPNTT 294 (490)
T ss_dssp HHHHHHTTTCEE--EETCCEEEEECS--SSCCEEEE-SS--------CEEECSEEEECCC--EEECCG
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEcC--CcEEEEEE-CC--------cEEECCEEEECCC--CCcChH
Confidence 888888888887 999999998752 12223444 33 6899999999999 466654
No 212
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.41 E-value=5.2e-07 Score=82.95 Aligned_cols=93 Identities=17% Similarity=0.190 Sum_probs=74.3
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (388)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+. + -..++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------G---LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-------------------------------T---CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-------------------------------c---CCHHHHHHH
Confidence 689999999999999999999999999999876431 1 124677788
Q ss_pred HHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
.+..++.++++ +++++|..++. + .|.+.++ . +.+|.||+|+| .+|+.
T Consensus 190 ~~~l~~~gV~i--~~~~~v~~i~~----~--~v~~~~g--------~-i~~D~vi~a~G--~~p~~ 236 (367)
T 1xhc_A 190 KDMLEETGVKF--FLNSELLEANE----E--GVLTNSG--------F-IEGKVKICAIG--IVPNV 236 (367)
T ss_dssp HHHHHHTTEEE--ECSCCEEEECS----S--EEEETTE--------E-EECSCEEEECC--EEECC
T ss_pred HHHHHHCCCEE--EcCCEEEEEEe----e--EEEECCC--------E-EEcCEEEECcC--CCcCH
Confidence 88888888887 89999988862 2 2666653 5 99999999999 46654
No 213
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.39 E-value=1.9e-06 Score=82.18 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=79.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 231 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-------------------------------RK--FDECIQNT 231 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-------------------------------cc--cCHHHHHH
Confidence 4699999999999999999999999999999876431 10 12456777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++.++++ +++++|+.++..++.....|.+.++ + .++.+|.||+|+| .+|+.
T Consensus 232 l~~~l~~~Gv~i--~~~~~v~~i~~~~~~~~~~v~~~~G----~---~~i~~D~vv~a~G--~~p~~ 287 (479)
T 2hqm_A 232 ITDHYVKEGINV--HKLSKIVKVEKNVETDKLKIHMNDS----K---SIDDVDELIWTIG--RKSHL 287 (479)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECC-CCCEEEEETTS----C---EEEEESEEEECSC--EEECC
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEEcCCCcEEEEEECCC----c---EEEEcCEEEECCC--CCCcc
Confidence 777788888887 9999999998654211356777653 1 4789999999999 46665
No 214
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.39 E-value=2.5e-07 Score=87.63 Aligned_cols=43 Identities=16% Similarity=0.319 Sum_probs=39.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~ 48 (388)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||.+..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 4589999999999999999999999999999999999996553
No 215
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.39 E-value=4e-07 Score=85.45 Aligned_cols=42 Identities=33% Similarity=0.539 Sum_probs=38.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcC-CCEEEEeecCCCCcccc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQS-IPYVILERENCYASIWK 47 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g-~~v~lie~~~~~gg~~~ 47 (388)
.++||+|||||++||++|..|++.| ++|+|+|+++.+||...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCH 47 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCccc
Confidence 4589999999999999999999999 89999999999988544
No 216
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.38 E-value=1.8e-06 Score=82.43 Aligned_cols=101 Identities=21% Similarity=0.239 Sum_probs=80.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~~--~~~~~~~~ 237 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------------------------------RN--FDYDLRQL 237 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------------------------------cc--cCHHHHHH
Confidence 4699999999999999999999999999999876331 10 12456777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+.+++.++++ +++++|..++..+ +.+.|.+.++ .++.+|.||+|+|. +|+..
T Consensus 238 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~aD~Vi~A~G~--~p~~~ 291 (484)
T 3o0h_A 238 LNDAMVAKGISI--IYEATVSQVQSTE--NCYNVVLTNG--------QTICADRVMLATGR--VPNTT 291 (484)
T ss_dssp HHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEETTS--------CEEEESEEEECCCE--EECCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEeeC--CEEEEEECCC--------cEEEcCEEEEeeCC--CcCCC
Confidence 777788888887 8999999998765 5677888775 68999999999994 66544
No 217
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.38 E-value=1.9e-06 Score=84.06 Aligned_cols=102 Identities=20% Similarity=0.231 Sum_probs=79.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 197 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------T--PVDREMAGF 197 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------h--hcCHHHHHH
Confidence 4699999999999999999999999999999976321 1 112466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeC-----------------CCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDE-----------------ATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s 149 (388)
+.+.+++.++++ +++++|..++... .++.+.+...++ .++.+|.||+|+| .
T Consensus 198 l~~~l~~~GV~i--~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--------~~i~~D~vi~a~G--~ 265 (565)
T 3ntd_A 198 AHQAIRDQGVDL--RLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG--------ELLETDLLIMAIG--V 265 (565)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS--------CEEEESEEEECSC--E
T ss_pred HHHHHHHCCCEE--EeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC--------CEEEcCEEEECcC--C
Confidence 778888888887 8999999987631 135566777654 6899999999999 4
Q ss_pred CCCC
Q 016519 150 NPFT 153 (388)
Q Consensus 150 ~p~~ 153 (388)
+|+.
T Consensus 266 ~p~~ 269 (565)
T 3ntd_A 266 RPET 269 (565)
T ss_dssp EECC
T ss_pred ccch
Confidence 6653
No 218
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.36 E-value=3.1e-07 Score=85.45 Aligned_cols=48 Identities=25% Similarity=0.313 Sum_probs=40.4
Q ss_pred CcccCCCCeEEEECCChHHHHHHHHHhhc-CCCEEEEeecCCCCccccc
Q 016519 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYASIWKK 48 (388)
Q Consensus 1 m~~~~~~~dv~IIGaG~aGl~~A~~l~~~-g~~v~lie~~~~~gg~~~~ 48 (388)
|.+....+||+|||||++|+++|..|++. |++|+|+|+++.+||.+..
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 44333468999999999999999999999 9999999999999997654
No 219
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.36 E-value=6.5e-07 Score=83.37 Aligned_cols=106 Identities=20% Similarity=0.274 Sum_probs=71.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhhc--CeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCC
Q 016519 185 GGKNVLVVGSGNSGMEIALDLANHA--AKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREG 262 (388)
Q Consensus 185 ~~~~v~VvG~G~~a~e~a~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (388)
.+|+|+|||+|+.|+.+|..|++.+ .+|+++.+++.+. +.|.. ... ..+..+...
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~-------~~p~~-~~v--------~~g~~~~~~------- 57 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYY-------TCYMS-NEV--------IGGDRELAS------- 57 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEE-------CSTTH-HHH--------HHTSSCGGG-------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCC-------CccCH-HHH--------hcCCCCHHH-------
Confidence 3789999999999999999999876 4799999887321 11110 000 000000000
Q ss_pred chhhhhccCCcceeCcchhhhhcCCcEEEecC-ceEEEcC--eEEeeCCcEEeccEEEEccCCCCCCc
Q 016519 263 PFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 327 (388)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 327 (388)
+.. -.+.+...+++++.+ ++.++.+ .+.+.+|+++.+|.+|+|||.+++.+
T Consensus 58 -------------~~~-~~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 58 -------------LRV-GYDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp -------------GEE-CSHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECGG
T ss_pred -------------Hhh-CHHHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccccC
Confidence 000 023344568998888 9999865 58889999999999999999998763
No 220
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.36 E-value=2.7e-07 Score=88.64 Aligned_cols=38 Identities=32% Similarity=0.433 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI 45 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 45 (388)
++|+|||||++||+||..|++.|++|+|+|+++.+||.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~ 39 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGR 39 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCc
Confidence 58999999999999999999999999999999999983
No 221
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.36 E-value=5.4e-06 Score=79.15 Aligned_cols=106 Identities=18% Similarity=0.082 Sum_probs=80.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++...+ +. ...++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~~--~d~~~~~~ 232 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL--------------------------------RG--FDQQMAEL 232 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS--------------------------------TT--SCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC--------------------------------cc--cCHHHHHH
Confidence 468999999999999999999999999999984311 10 12467778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|..++..+ ++...|.+.++.. ++. .++.+|.||+|+| .+|+..
T Consensus 233 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~-~~~--~~~~~D~vi~a~G--~~p~~~ 292 (483)
T 3dgh_A 233 VAASMEERGIPF--LRKTVPLSVEKQD-DGKLLVKYKNVET-GEE--SEDVYDTVLWAIG--RKGLVD 292 (483)
T ss_dssp HHHHHHHTTCCE--EETEEEEEEEECT-TSCEEEEEEETTT-CCE--EEEEESEEEECSC--EEECCG
T ss_pred HHHHHHhCCCEE--EeCCEEEEEEEcC-CCcEEEEEecCCC-Cce--eEEEcCEEEECcc--cccCcC
Confidence 888888889887 9999999998754 2346677766532 122 5899999999999 466543
No 222
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.35 E-value=4.2e-06 Score=79.43 Aligned_cols=132 Identities=14% Similarity=0.108 Sum_probs=72.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecCCCCcccccCCcCceeee--cCC---ccccCCCC--------CCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLH--LAK---QFCQLPHL--------PFP 71 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~--~~~---~~~~~~~~--------~~~ 71 (388)
..+|+|||+|..|+.+|..|.+. +.+|+++++.+.+-- .....+... .|. .+..++.. ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p----~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP----ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB----CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC----ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 46999999999999999999999 889999999874310 000000000 000 00000000 000
Q ss_pred CCCCCCCCHHHHHHHH-----HHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeec
Q 016519 72 SSYPMFVSRAQFIEYL-----DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASG 146 (388)
Q Consensus 72 ~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG 146 (388)
..+.. .+...+.+.. +......++.+ +++++|+.+...+ +.|.|.+.+... |+. .++.+|.||+|||
T Consensus 303 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~i--~~~~~v~~v~~~~--~~~~v~~~~~~~-g~~--~~~~~D~Vv~AtG 374 (463)
T 3s5w_A 303 TNYSV-VDTDLIERIYGVFYRQKVSGIPRHAF--RCMTTVERATATA--QGIELALRDAGS-GEL--SVETYDAVILATG 374 (463)
T ss_dssp GTSSC-BCHHHHHHHHHHHHHHHHHCCCCSEE--ETTEEEEEEEEET--TEEEEEEEETTT-CCE--EEEEESEEEECCC
T ss_pred cCCCc-CCHHHHHHHHHHHHHHHhcCCCCeEE--EeCCEEEEEEecC--CEEEEEEEEcCC-CCe--EEEECCEEEEeeC
Confidence 00000 0111111111 11111135554 8999999998765 678888874321 222 5799999999999
Q ss_pred CCCCCC
Q 016519 147 ETSNPF 152 (388)
Q Consensus 147 ~~s~p~ 152 (388)
. +|+
T Consensus 375 ~--~p~ 378 (463)
T 3s5w_A 375 Y--ERQ 378 (463)
T ss_dssp E--ECC
T ss_pred C--CCC
Confidence 4 665
No 223
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.35 E-value=3e-06 Score=76.10 Aligned_cols=105 Identities=22% Similarity=0.283 Sum_probs=75.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHHH
Confidence 4689999999999999999999999999999875321 12345556
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+.+++.++++ +++++|..+..++ +....|.+.+...+|+. .++.+|.||+|+| .+|+.
T Consensus 190 l~~~l~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~~--~~i~~D~vv~a~G--~~p~~ 249 (320)
T 1trb_A 190 LMDKVENGNIIL--HTNRTLEEVTGDQ-MGVTGVRLRDTQNSDNI--ESLDVAGLFVAIG--HSPNT 249 (320)
T ss_dssp HHHHHHTSSEEE--ECSCEEEEEEECS-SSEEEEEEECCTTCCCC--EEEECSEEEECSC--EEESC
T ss_pred HHHhcccCCeEE--EcCceeEEEEcCC-CceEEEEEEeccCCCce--EEEEcCEEEEEeC--CCCCh
Confidence 666667778776 8999999998654 12233555541000111 6899999999999 46654
No 224
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.34 E-value=2.5e-06 Score=81.66 Aligned_cols=101 Identities=16% Similarity=0.085 Sum_probs=77.1
Q ss_pred CCeEEEECCChHHHHHHHHHhh----cCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSL----QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~----~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (388)
..+|+|||||+.|+.+|..|.+ .|.+|+++++.+... .. .-..+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~-------------------------------~~-~l~~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM-------------------------------GK-ILPEY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT-------------------------------TT-TSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc-------------------------------cc-cCCHH
Confidence 4689999999999999999987 478999998865211 00 01145
Q ss_pred HHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+.+....++.++++ +++++|..++..+ +...|.+.++ .++.+|.||+|+|. +|+.
T Consensus 228 ~~~~~~~~l~~~GV~v--~~~~~V~~i~~~~--~~~~v~l~dG--------~~i~aD~Vv~a~G~--~pn~ 284 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKV--MPNAIVQSVGVSS--GKLLIKLKDG--------RKVETDHIVAAVGL--EPNV 284 (493)
T ss_dssp HHHHHHHHHHTTTCEE--ECSCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCCE--EECC
T ss_pred HHHHHHHHHHhcCCEE--EeCCEEEEEEecC--CeEEEEECCC--------CEEECCEEEECCCC--CccH
Confidence 6777777888888887 9999999998654 4556777765 68999999999994 6654
No 225
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.34 E-value=2.4e-07 Score=85.67 Aligned_cols=108 Identities=14% Similarity=0.194 Sum_probs=73.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchh
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFF 265 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (388)
..+|+|||+|.+|+.+|..|...+.+|+++.+.+..++.. ..+.. .+.+..+.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~-------~~l~~--------~l~g~~~~------------ 61 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYR-------PRLNE--------IIAKNKSI------------ 61 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCG-------GGHHH--------HHHSCCCG------------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCccc-------ChhhH--------HHcCCCCH------------
Confidence 4569999999999999999977788999999988442211 11100 01001000
Q ss_pred hhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC--eEEeeCCcEEeccEEEEccCCCCCCcc
Q 016519 266 MKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTNV 328 (388)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~~ 328 (388)
..+.....+.+++.+++++.+ |++++.+ .|.+.+|+++.+|.+|+|||.+|..+.
T Consensus 62 --------~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 62 --------DDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp --------GGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCC
T ss_pred --------HHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCC
Confidence 011111234455678998877 8888854 688899999999999999999887643
No 226
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.34 E-value=7.5e-07 Score=79.07 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=67.9
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCchhh
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFM 266 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (388)
.+|+|||+|++|+.+|..|++.|.+|+++.+.+...........++.. +.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~------------------------~~------ 52 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQ------------------------DG------ 52 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTC------------------------TT------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCC------------------------CC------
Confidence 479999999999999999999999999999866221000000000000 00
Q ss_pred hhccCCcceeCcchhhhhcC-CcEEEecC-ceEEEcC----eEEeeCCcEEeccEEEEccCCCCCCc
Q 016519 267 KAAYGKYPVIDAGTCEKIKS-GQIQVLPG-IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTN 327 (388)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~-~~v~~~~~-v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~ 327 (388)
.....+...+.+.+.+ .+++++.+ +..++.+ .+.+.+|+++.+|.||+|||..|..+
T Consensus 53 ----~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 53 ----KAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp ----CCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred ----CCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 0001111122333444 36777666 7777644 46777888999999999999987654
No 227
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.33 E-value=5.1e-06 Score=79.17 Aligned_cols=104 Identities=18% Similarity=0.198 Sum_probs=80.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 226 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-------------------------------P--AVDEQVAKE 226 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999976431 1 012467777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +++++|..++..+ +...+...++. |. .++.+|.||+|+| .+|+..
T Consensus 227 l~~~l~~~Gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~--g~---~~~~~D~vi~a~G--~~p~~~ 283 (476)
T 3lad_A 227 AQKILTKQGLKI--LLGARVTGTEVKN--KQVTVKFVDAE--GE---KSQAFDKLIVAVG--RRPVTT 283 (476)
T ss_dssp HHHHHHHTTEEE--EETCEEEEEEECS--SCEEEEEESSS--EE---EEEEESEEEECSC--EEECCT
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcC--CEEEEEEEeCC--Cc---EEEECCEEEEeeC--CcccCC
Confidence 778888888877 9999999998765 55667666532 11 5799999999999 466654
No 228
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.31 E-value=1.3e-06 Score=82.29 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=75.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||||+.|+.+|..+.+.|.+|+++++.+.+.. . ...++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~-------------------------------~--~d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK-------------------------------L--MDADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST-------------------------------T--SCGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc-------------------------------c--ccchhHHH
Confidence 46899999999999999999999999999999774320 0 11345566
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+....++.++++ +++++|..++.. .+.+.++ .++.+|.|++|+| .+|+.
T Consensus 194 ~~~~l~~~gV~i--~~~~~v~~~~~~------~v~~~~g--------~~~~~D~vl~a~G--~~Pn~ 242 (437)
T 4eqs_A 194 ILDELDKREIPY--RLNEEINAINGN------EITFKSG--------KVEHYDMIIEGVG--THPNS 242 (437)
T ss_dssp HHHHHHHTTCCE--EESCCEEEEETT------EEEETTS--------CEEECSEEEECCC--EEESC
T ss_pred HHHHhhccceEE--EeccEEEEecCC------eeeecCC--------eEEeeeeEEEEec--eecCc
Confidence 777778888887 999999887632 2677765 7899999999999 46654
No 229
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.30 E-value=4.6e-06 Score=79.74 Aligned_cols=106 Identities=16% Similarity=0.031 Sum_probs=78.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|++.|.+|+++++...+. . -..++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~--------------------------------~--~d~~~~~~ 230 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR--------------------------------G--FDQQMSSL 230 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST--------------------------------T--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc--------------------------------c--CCHHHHHH
Confidence 3589999999999999999999999999999854211 0 12467778
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ ++++.+..+...+ ++...|...+... |+. .++.+|.||+|+| .+|+..
T Consensus 231 l~~~l~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~~~-g~~--~~~~~D~vi~a~G--~~p~~~ 290 (488)
T 3dgz_A 231 VTEHMESHGTQF--LKGCVPSHIKKLP-TNQLQVTWEDHAS-GKE--DTGTFDTVLWAIG--RVPETR 290 (488)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEECT-TSCEEEEEEETTT-TEE--EEEEESEEEECSC--EEESCG
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcC-CCcEEEEEEeCCC-Cee--EEEECCEEEEccc--CCcccC
Confidence 888888888887 8999999987643 3445666655321 121 4689999999999 466544
No 230
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.30 E-value=6.3e-07 Score=82.75 Aligned_cols=43 Identities=26% Similarity=0.308 Sum_probs=39.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~ 48 (388)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 3589999999999999999999999999999999999997764
No 231
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.30 E-value=6.5e-07 Score=83.63 Aligned_cols=105 Identities=20% Similarity=0.321 Sum_probs=73.0
Q ss_pred CeEEEECCCCCHHHHHHHHHh---hcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCc
Q 016519 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGP 263 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~---~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (388)
++|+|||+|.+|+.+|..|++ .+.+|+++.+++.+.+. |.. +....
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~-------~~~------------------------~~~~~ 50 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR-------PAL------------------------PHVAI 50 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC-------CSS------------------------CCCCS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec-------cch------------------------hhccc
Confidence 479999999999999999999 78999999999833111 100 00000
Q ss_pred hhhhhccCCcceeCcchhhhhcCCcEEEecC-ceEEEcC--eEEeeCCcE----EeccEEEEccCCCCCCc
Q 016519 264 FFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHS----HHFDSIVFCTGFKRSTN 327 (388)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~----~~~D~vi~atG~~~~~~ 327 (388)
-......+...+.+.+.+.+++++.+ +..++.+ .|.+.+++. +.+|.||+|||.+|+.+
T Consensus 51 -----~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 51 -----GVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp -----SCCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred -----CCcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 00001223334455666678888888 8888765 688877764 89999999999988763
No 232
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.30 E-value=5.8e-06 Score=78.83 Aligned_cols=110 Identities=15% Similarity=-0.007 Sum_probs=80.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 233 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------------------------------R--SFDSMISTN 233 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999876321 1 112456777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +.+++|..++..++.....+.+.+... ++....++.+|.||+|+| .+|+..
T Consensus 234 ~~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~-g~~~g~~~~~D~vi~a~G--~~p~~~ 296 (478)
T 3dk9_A 234 CTEELENAGVEV--LKFSQVKEVKKTLSGLEVSMVTAVPGR-LPVMTMIPDVDCLLWAIG--RVPNTK 296 (478)
T ss_dssp HHHHHHHTTCEE--ETTEEEEEEEECSSSEEEEEEECCTTS-CCEEEEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcCCCcEEEEEEccCCC-CcccceEEEcCEEEEeec--cccCCC
Confidence 888888888887 899999999875422135666665321 110004789999999999 466654
No 233
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.27 E-value=5.7e-06 Score=74.81 Aligned_cols=100 Identities=14% Similarity=0.054 Sum_probs=74.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ......+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHH
Confidence 4689999999999999999999999999999876321 11345566
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc---ccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS---NLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~---~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++.++++ ++++++..++.++ ....|.+. ++ +. .++.+|.||+|+| ..|+.
T Consensus 197 l~~~l~~~gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~~g----~~--~~i~~D~vi~a~G--~~p~~ 254 (335)
T 2zbw_A 197 LMKAHEEGRLEV--LTPYELRRVEGDE--RVRWAVVFHNQTQ----EE--LALEVDAVLILAG--YITKL 254 (335)
T ss_dssp HHHHHHTTSSEE--ETTEEEEEEEESS--SEEEEEEEETTTC----CE--EEEECSEEEECCC--EEEEC
T ss_pred HHhccccCCeEE--ecCCcceeEccCC--CeeEEEEEECCCC----ce--EEEecCEEEEeec--CCCCc
Confidence 667677778776 8999999988632 32345554 33 21 5799999999999 45654
No 234
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.27 E-value=2.3e-06 Score=80.46 Aligned_cols=105 Identities=26% Similarity=0.358 Sum_probs=73.1
Q ss_pred CeEEEECCCCCHHHHHHHHHh--hcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhcCccccccCCCCCCch
Q 016519 187 KNVLVVGSGNSGMEIALDLAN--HAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPF 264 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~--~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (388)
++|+|||+|.+|+.+|..|++ .+.+|+++.+++.+.+. | ..... ..+...
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-------~--~~~~~-------~~g~~~------------ 54 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------P--AFPHL-------AMGWRK------------ 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------G--GHHHH-------HHTCSC------------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-------C--Ccchh-------ccCccC------------
Confidence 579999999999999999999 67899999998843211 1 00000 000000
Q ss_pred hhhhccCCcceeCcchhhhhcCCcEEEecC-ceEEEcC--eEEeeCCcEEeccEEEEccCCCCCCc
Q 016519 265 FMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 327 (388)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 327 (388)
...+...+.+.+++.+++++.+ +..++.+ .+.+.+++++.+|.+|+|||.+++.+
T Consensus 55 --------~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 55 --------FEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp --------GGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred --------HHHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 0112222345556678998877 8888865 58888998999999999999998764
No 235
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.25 E-value=1.3e-06 Score=83.31 Aligned_cols=43 Identities=23% Similarity=0.424 Sum_probs=39.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcC-CCEEEEeecCCCCccccc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQS-IPYVILERENCYASIWKK 48 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g-~~v~lie~~~~~gg~~~~ 48 (388)
..+||+|||||++|+++|..|.+.| .+|+|+|+.+.+||.|..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 4589999999999999999999998 799999999999998775
No 236
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.25 E-value=5.6e-06 Score=78.56 Aligned_cols=101 Identities=15% Similarity=0.082 Sum_probs=78.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-------------------------------~~--~~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-------------------------------SR--FDQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4689999999999999999999999999999876321 10 12466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEE-EcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVK-ASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+.+++.++++ +.+++|..++..+ ++.+.|. +.++ . +.+|.||+|+|. +|+..
T Consensus 217 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~g--------~-i~aD~Vv~a~G~--~p~~~ 271 (463)
T 4dna_A 217 LHAAMEEKGIRI--LCEDIIQSVSADA-DGRRVATTMKHG--------E-IVADQVMLALGR--MPNTN 271 (463)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEECT-TSCEEEEESSSC--------E-EEESEEEECSCE--EESCT
T ss_pred HHHHHHHCCCEE--ECCCEEEEEEEcC-CCEEEEEEcCCC--------e-EEeCEEEEeeCc--ccCCC
Confidence 888888888887 8999999998754 2335676 6553 5 999999999994 66544
No 237
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.21 E-value=1.5e-05 Score=76.69 Aligned_cols=107 Identities=16% Similarity=0.040 Sum_probs=75.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|++.|.+|+++++...+ +. ...++.+.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l--------------------------------~~--~d~~~~~~ 255 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL--------------------------------RG--FDQDMANK 255 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc--------------------------------cc--CCHHHHHH
Confidence 357999999999999999999999999999984311 10 12467777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCC--CCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+.+..++.++++ +.++++..+...++ .+...+.....+. ++. .++.+|.||+|+| .+|+..
T Consensus 256 ~~~~l~~~GV~v--~~~~~v~~v~~~~~~~~~~~~v~~~~~~g-~~~--~~~~~D~vi~a~G--~~p~~~ 318 (519)
T 3qfa_A 256 IGEHMEEHGIKF--IRQFVPIKVEQIEAGTPGRLRVVAQSTNS-EEI--IEGEYNTVMLAIG--RDACTR 318 (519)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEEECCTTCEEEEEEEESSS-SCE--EEEEESEEEECSC--EEESCS
T ss_pred HHHHHHHCCCEE--EeCCeEEEEEEccCCCCceEEEEEEECCC-cEE--EEEECCEEEEecC--CcccCC
Confidence 888888888887 88988877765432 1344454432211 111 4678999999999 466554
No 238
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.19 E-value=8e-07 Score=85.66 Aligned_cols=39 Identities=31% Similarity=0.434 Sum_probs=36.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC-CCEEEEeecCCCCcc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILERENCYASI 45 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g-~~v~lie~~~~~gg~ 45 (388)
.+||+|||||++||+||..|.+.| ++|+|+|+++.+||.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 479999999999999999999999 999999999999884
No 239
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.19 E-value=1.2e-06 Score=82.83 Aligned_cols=40 Identities=35% Similarity=0.497 Sum_probs=37.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~ 46 (388)
++||+|||||++||++|..|++.|++|+|+|+++.+||..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 4799999999999999999999999999999999888754
No 240
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.17 E-value=9.1e-06 Score=76.81 Aligned_cols=99 Identities=16% Similarity=0.222 Sum_probs=72.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 195 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVL-------------------------------RR-SFDKEVTDI 195 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc-------------------------------hh-hcCHHHHHH
Confidence 3699999999999999999999999999999976432 00 012456677
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++. +++ ++++.|..++..+ .......++ .++.+|.||+|+| .+|+.
T Consensus 196 l~~~l~~~-v~i--~~~~~v~~i~~~~---~v~~v~~~g--------~~i~~D~Vv~a~G--~~p~~ 246 (449)
T 3kd9_A 196 LEEKLKKH-VNL--RLQEITMKIEGEE---RVEKVVTDA--------GEYKAELVILATG--IKPNI 246 (449)
T ss_dssp HHHHHTTT-SEE--EESCCEEEEECSS---SCCEEEETT--------EEEECSEEEECSC--EEECC
T ss_pred HHHHHHhC-cEE--EeCCeEEEEeccC---cEEEEEeCC--------CEEECCEEEEeeC--CccCH
Confidence 77777766 665 8899998887543 222223333 7899999999999 46653
No 241
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.17 E-value=1.4e-06 Score=83.05 Aligned_cols=40 Identities=35% Similarity=0.475 Sum_probs=36.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI 45 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 45 (388)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 4589999999999999999999999999999999999873
No 242
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.16 E-value=1.7e-06 Score=83.06 Aligned_cols=41 Identities=29% Similarity=0.426 Sum_probs=38.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK 47 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~ 47 (388)
.+||+|||||++||++|..|++.|++|+|+|+.+.+||.+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 53 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLR 53 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCcee
Confidence 47999999999999999999999999999999999988543
No 243
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.16 E-value=6.7e-06 Score=80.54 Aligned_cols=98 Identities=15% Similarity=0.244 Sum_probs=77.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------PP--IDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------cc--CCHHHHHH
Confidence 4689999999999999999999999999999876331 10 12466777
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++.++++ +++++|..++... + .|.+.++ .++.+|.||+|+|. +|+.
T Consensus 234 l~~~l~~~GV~i--~~~~~v~~i~~~~--~--~v~~~~g--------~~i~~D~Vi~a~G~--~p~~ 284 (588)
T 3ics_A 234 VHEHMKNHDVEL--VFEDGVDALEENG--A--VVRLKSG--------SVIQTDMLILAIGV--QPES 284 (588)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEGGG--T--EEEETTS--------CEEECSEEEECSCE--EECC
T ss_pred HHHHHHHcCCEE--EECCeEEEEecCC--C--EEEECCC--------CEEEcCEEEEccCC--CCCh
Confidence 778888888887 8999999987643 3 3666664 68999999999994 6654
No 244
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.15 E-value=7.4e-06 Score=75.13 Aligned_cols=108 Identities=10% Similarity=0.115 Sum_probs=72.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... . + + +.......+.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~---------------------~--~--d-~~~~~~~~~~~~ 219 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------------D--A--D-PSVRLSPYTRQR 219 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC---------------------C--C--C-CCccCCHHHHHH
Confidence 358999999999999999999999999999987633100 0 0 0 001112345566
Q ss_pred HHHHHHhcC-CcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFN-IVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+....++.+ +++ +.+.+|..++..+ +.+.|.+.++. ....+|.+|+|+| ..|+.
T Consensus 220 l~~~l~~~g~v~~--~~~~~v~~i~~~~--~~~~v~~~~g~-------~~~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 220 LGNVIKQGARIEM--NVHYTVKDIDFNN--GQYHISFDSGQ-------SVHTPHEPILATG--FDATK 274 (369)
T ss_dssp HHHHHHTTCCEEE--ECSCCEEEEEEET--TEEEEEESSSC-------CEEESSCCEECCC--BCGGG
T ss_pred HHHHHhhCCcEEE--ecCcEEEEEEecC--CceEEEecCCe-------EeccCCceEEeec--cCCcc
Confidence 666667665 776 8899999887654 55677777651 3334699999999 46654
No 245
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.14 E-value=1.9e-06 Score=82.45 Aligned_cols=40 Identities=25% Similarity=0.390 Sum_probs=37.6
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI 45 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 45 (388)
..+||+|||||++||++|..|.+.|++|+|+|+.+.+||.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 4589999999999999999999999999999999999984
No 246
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.14 E-value=1.6e-06 Score=83.67 Aligned_cols=39 Identities=31% Similarity=0.457 Sum_probs=36.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI 45 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 45 (388)
.+||+|||||++||++|..|++.|++|+|+|+++.+||.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 479999999999999999999999999999999988873
No 247
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=1e-05 Score=74.04 Aligned_cols=100 Identities=16% Similarity=0.141 Sum_probs=72.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ....+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-----------------------------------GHGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-----------------------------------SCSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-----------------------------------CCHHHHHH
Confidence 3689999999999999999999999999999876321 00133445
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcE-EEEEc--ccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMW-NVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~v~~~--~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+....++.++++ +++++|..+...+ +.. .|.+. ++ +. .++.+|.||+|+| ..|+.
T Consensus 208 l~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~~v~~~~~~g----~~--~~i~~D~vi~a~G--~~p~~ 265 (360)
T 3ab1_A 208 VERARANGTIDV--YLETEVASIEESN--GVLTRVHLRSSDG----SK--WTVEADRLLILIG--FKSNL 265 (360)
T ss_dssp SHHHHHHTSEEE--ESSEEEEEEEEET--TEEEEEEEEETTC----CE--EEEECSEEEECCC--BCCSC
T ss_pred HHHHhhcCceEE--EcCcCHHHhccCC--CceEEEEEEecCC----Ce--EEEeCCEEEECCC--CCCCH
Confidence 555566667776 8999999998754 322 34443 43 21 6799999999999 45654
No 248
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.13 E-value=1.3e-05 Score=76.78 Aligned_cols=99 Identities=19% Similarity=0.298 Sum_probs=72.3
Q ss_pred CeEEEECCChHHHHHHHHHhhc--------------CCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQ--------------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSS 73 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (388)
..++|||||+.|+.+|..|+.. ..+|+|+|..+.+.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 4799999999999999988753 36899999987432
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 016519 74 YPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (388)
Q Consensus 74 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~ 147 (388)
+.+ .+++.+++++..++.++++ +++++|+.++.+. ....+...++ +..+.++.+|.||.|+|.
T Consensus 268 -~~~--~~~~~~~~~~~L~~~GV~v--~~~~~v~~v~~~~--~~~~~~~~dg----~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 268 -NMF--EKKLSSYAQSHLENTSIKV--HLRTAVAKVEEKQ--LLAKTKHEDG----KITEETIPYGTLIWATGN 330 (502)
T ss_dssp -TTS--CHHHHHHHHHHHHHTTCEE--ETTEEEEEECSSE--EEEEEECTTS----CEEEEEEECSEEEECCCE
T ss_pred -cCC--CHHHHHHHHHHHHhcceee--ecCceEEEEeCCc--eEEEEEecCc----ccceeeeccCEEEEccCC
Confidence 111 2678888999999999888 9999999887432 2222233332 211257999999999994
No 249
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.11 E-value=1.6e-05 Score=75.44 Aligned_cols=102 Identities=19% Similarity=0.253 Sum_probs=73.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ...++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~-~d~~~~~~ 219 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-------------------------------ITL-EDQDIVNT 219 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TTS-CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-------------------------------CCC-CCHHHHHH
Confidence 4689999999999999999999999999999876331 100 02345555
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc--ccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+++..+ +++ +++++|..++..+ ++...|.+. ++.. .++.+|.||+|+| .+|+..
T Consensus 220 l~~~l~---v~i--~~~~~v~~i~~~~-~~~v~v~~~~~~G~~------~~i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 220 LLSILK---LNI--KFNSPVTEVKKIK-DDEYEVIYSTKDGSK------KSIFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp HHHHHC---CCE--ECSCCEEEEEEEE-TTEEEEEECCTTSCC------EEEEESCEEECCC--EEECCC
T ss_pred HHhcCE---EEE--EECCEEEEEEEcC-CCcEEEEEEecCCce------EEEEcCEEEECcC--CCcccc
Confidence 554433 454 8899999887643 144567766 3322 5899999999999 466654
No 250
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.11 E-value=2.4e-06 Score=78.46 Aligned_cols=40 Identities=25% Similarity=0.262 Sum_probs=37.5
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK 47 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~ 47 (388)
+||+|||||++|+++|..|++.|++|+|+|+.+.+||...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceE
Confidence 6999999999999999999999999999999999998654
No 251
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.10 E-value=2.8e-06 Score=78.55 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=38.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~ 48 (388)
+||+|||||++|+++|..|.+.|++|+|+|+++.+||.+..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 79999999999999999999999999999999999997764
No 252
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.09 E-value=2.6e-06 Score=81.62 Aligned_cols=38 Identities=24% Similarity=0.429 Sum_probs=36.3
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI 45 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 45 (388)
+||+|||||++||++|..|.+.|++|+|+|+.+.+||.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGR 77 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 79999999999999999999999999999999988873
No 253
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.09 E-value=2e-06 Score=81.97 Aligned_cols=38 Identities=29% Similarity=0.392 Sum_probs=35.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC--CEEEEeecCCCCcc
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASI 45 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~~~gg~ 45 (388)
+||+|||||++||++|+.|++.|. +|+|+|+.+.+||.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~ 42 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGW 42 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTT
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCc
Confidence 699999999999999999999999 99999999888873
No 254
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.07 E-value=2.8e-06 Score=81.48 Aligned_cols=41 Identities=29% Similarity=0.300 Sum_probs=37.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~ 46 (388)
..+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 46899999999999999999999999999999999888853
No 255
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.06 E-value=2.1e-06 Score=80.63 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.++||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999876
No 256
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.04 E-value=8.1e-06 Score=72.84 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=30.5
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
-.|+|||+|+.|+.+|..+++.|.+|+++.+..
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999865
No 257
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.03 E-value=3.8e-06 Score=79.98 Aligned_cols=39 Identities=26% Similarity=0.333 Sum_probs=36.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--CCEEEEeecCCCCcc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASI 45 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g--~~v~lie~~~~~gg~ 45 (388)
.+||+|||||++|+++|+.|.+.| ++|+|+|+.+.+||.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 479999999999999999999999 999999999888874
No 258
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.02 E-value=2.2e-05 Score=70.02 Aligned_cols=99 Identities=19% Similarity=0.156 Sum_probs=68.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. +.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-----~~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC----------------------------------cc-----HH
Confidence 4689999999999999999999999999999876321 00 12
Q ss_pred HHHHHHh-cCCcceeEeceEEEEEEEeCCCCcE-EEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSH-FNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++ .++++ +++++++.+..++ +.. .|.+.+... |+. .++.+|.||+|+|. .|+.
T Consensus 185 ~~~~l~~~~gv~v--~~~~~v~~i~~~~--~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G~--~p~~ 244 (310)
T 1fl2_A 185 LQDKLRSLKNVDI--ILNAQTTEVKGDG--SKVVGLEYRDRVS-GDI--HNIELAGIFVQIGL--LPNT 244 (310)
T ss_dssp HHHHHHTCTTEEE--ESSEEEEEEEESS--SSEEEEEEEETTT-CCE--EEEECSEEEECSCE--EESC
T ss_pred HHHHHhhCCCeEE--ecCCceEEEEcCC--CcEEEEEEEECCC-CcE--EEEEcCEEEEeeCC--ccCc
Confidence 2333344 46665 8899999988643 332 455554211 222 57899999999994 5654
No 259
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.01 E-value=4.4e-05 Score=74.87 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=72.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||||+.|+.+|..|++.|.+|+++++.. +. +. ...++.++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l-------------------------------~~--~d~~~~~~ 331 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LL-------------------------------RG--FDQQMAEK 331 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-------------------------------TT--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-Cc-------------------------------Cc--CCHHHHHH
Confidence 3589999999999999999999999999999862 11 10 12456677
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEe-----CC--CCcEEEEE--cccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYD-----EA--TNMWNVKA--SNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~-----~~--~~~~~v~~--~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++.++++ ++++.+..+... +. .+.+.+.. .++ +. ..+.+|.||+|+| .+|+.
T Consensus 332 ~~~~l~~~gv~i--~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g----~~--~~~~~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 332 VGDYMENHGVKF--AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDG----KK--FEEEFETVIFAVG--REPQL 397 (598)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEEEECCBTTTTBCCEEEEEEEETTS----CE--EEEEESEEEECSC--EEECG
T ss_pred HHHHHHhCCCEE--EECCeEEEEEeccccccccCCCceEEEEEEeCCC----cE--EeccCCEEEEEeC--Ccccc
Confidence 777777888887 888888777543 11 13444443 333 21 3456999999999 46654
No 260
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.01 E-value=2e-06 Score=80.31 Aligned_cols=135 Identities=16% Similarity=0.168 Sum_probs=74.0
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhH---------------HHhhc---CChhhHHHHHHHHHHHH
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGL---------------VLLRY---VPCGGVDTLMVMLSRLV 247 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~---------------~~~~~---~~~~~~~~~~~~~~~~~ 247 (388)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+...-.. ....+ .+......+..+.....
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 4579999999999999999999999999999987321000 00000 11111111111101111
Q ss_pred hcCccccccCCC--CCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEc--Ce--EEeeCCcEEeccEEEEc
Q 016519 248 YGDLSKYGIHKP--REGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NE--VIFENGHSHHFDSIVFC 319 (388)
Q Consensus 248 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~--v~~~~g~~~~~D~vi~a 319 (388)
....++.++... ..+..+ .......+...+.+.+++.+++++.+ |+++.. ++ |.+.+| ++.+|.||+|
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~---~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlA 182 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLF---CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVA 182 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEE---ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEEC
T ss_pred HHHHHHcCCCcEEeeCCEEe---eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEEC
Confidence 111111222111 111100 01112234445566677778999887 777753 33 555566 8999999999
Q ss_pred cCCCC
Q 016519 320 TGFKR 324 (388)
Q Consensus 320 tG~~~ 324 (388)
||..+
T Consensus 183 tG~~S 187 (417)
T 3v76_A 183 SGGKS 187 (417)
T ss_dssp CCCSS
T ss_pred CCCcc
Confidence 99986
No 261
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.00 E-value=1.6e-05 Score=71.48 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=68.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. .. +
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~~---~ 193 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----------------------------------AN-KV---A 193 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----------------------------------SC-HH---H
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----------------------------------cc-hH---H
Confidence 3689999999999999999999999999999876321 00 11 2
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
.+...+..++++ ++++++..+..++ ....|.+.+... |+. .++.+|.||+|+| .+|+.
T Consensus 194 ~~~l~~~~gv~i--~~~~~v~~i~~~~--~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 251 (325)
T 2q7v_A 194 QARAFANPKMKF--IWDTAVEEIQGAD--SVSGVKLRNLKT-GEV--SELATDGVFIFIG--HVPNT 251 (325)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESS--SEEEEEEEETTT-CCE--EEEECSEEEECSC--EEESC
T ss_pred HHHHHhcCCceE--ecCCceEEEccCC--cEEEEEEEECCC-CcE--EEEEcCEEEEccC--CCCCh
Confidence 223333456665 8899999988632 323455542100 121 5799999999999 46654
No 262
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.99 E-value=5.2e-06 Score=79.00 Aligned_cols=42 Identities=40% Similarity=0.529 Sum_probs=38.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeecCCCCccccc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKK 48 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~~~gg~~~~ 48 (388)
.+||+|||||++|+++|..|.+.|+ +|+|+|+.+.+||.+..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 5899999999999999999999999 89999999999986553
No 263
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.99 E-value=1.9e-05 Score=70.57 Aligned_cols=102 Identities=15% Similarity=0.127 Sum_probs=68.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. .. .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~~---~ 184 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR----------------------------------CA-PI---T 184 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC----------------------------------SC-HH---H
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC----------------------------------CC-HH---H
Confidence 4699999999999999999999999999999876321 00 11 2
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
.+...++.++++ ++++++..+...+ +....|.+.+... |+. .++.+|.||+|+| ..|+.+
T Consensus 185 ~~~l~~~~gv~v--~~~~~v~~i~~~~-~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~~ 244 (311)
T 2q0l_A 185 LEHAKNNDKIEF--LTPYVVEEIKGDA-SGVSSLSIKNTAT-NEK--RELVVPGFFIFVG--YDVNNA 244 (311)
T ss_dssp HHHHHTCTTEEE--ETTEEEEEEEEET-TEEEEEEEEETTT-CCE--EEEECSEEEECSC--EEECCG
T ss_pred HHHHhhCCCeEE--EeCCEEEEEECCC-CcEeEEEEEecCC-Cce--EEEecCEEEEEec--CccChh
Confidence 222333456665 8899999988653 1212355542100 121 5799999999999 466543
No 264
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.99 E-value=3e-05 Score=70.01 Aligned_cols=101 Identities=17% Similarity=0.114 Sum_probs=70.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.+.+|+++++.+.+. ... .+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-----------------------------------~~~---~~ 214 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-----------------------------------AST---IM 214 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-----------------------------------CCH---HH
Confidence 4689999999999999999999999999999876321 011 12
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
.+...+..++++ +.++++..++.++ +....|.+.+... ++. .++.+|.||+|+|. .|..
T Consensus 215 ~~~l~~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~-g~~--~~i~~D~vi~a~G~--~p~~ 273 (338)
T 3itj_A 215 QKRAEKNEKIEI--LYNTVALEAKGDG-KLLNALRIKNTKK-NEE--TDLPVSGLFYAIGH--TPAT 273 (338)
T ss_dssp HHHHHHCTTEEE--ECSEEEEEEEESS-SSEEEEEEEETTT-TEE--EEEECSEEEECSCE--EECC
T ss_pred HHHHHhcCCeEE--eecceeEEEEccc-CcEEEEEEEECCC-Cce--EEEEeCEEEEEeCC--CCCh
Confidence 223333347776 8899999998754 2233366655211 222 67999999999994 5554
No 265
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.98 E-value=5.8e-06 Score=77.72 Aligned_cols=42 Identities=17% Similarity=0.307 Sum_probs=38.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~ 48 (388)
.+||+|||+|++|+++|..|++.|++|+++|+++..||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 589999999999999999999999999999999999986553
No 266
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.97 E-value=3.1e-05 Score=69.40 Aligned_cols=99 Identities=20% Similarity=0.246 Sum_probs=70.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. . .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------~~-~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK----------------------------------AQ-P---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC----------------------------------SC-H---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC----------------------------------cC-H---HH
Confidence 4689999999999999999999999999999876321 01 1 23
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~ 152 (388)
++...++.++++ ++++++..++.++ ....|.+.+... |+. .++.+|.||+|+| ..|.
T Consensus 196 ~~~~~~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~~~~D~vv~a~G--~~p~ 252 (323)
T 3f8d_A 196 VETVKKKPNVEF--VLNSVVKEIKGDK--VVKQVVVENLKT-GEI--KELNVNGVFIEIG--FDPP 252 (323)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESS--SEEEEEEEETTT-CCE--EEEECSEEEECCC--EECC
T ss_pred HHHHHhCCCcEE--EeCCEEEEEeccC--ceeEEEEEECCC-Cce--EEEEcCEEEEEEC--CCCC
Confidence 344444457666 8899999988653 444566665111 121 5899999999999 4665
No 267
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.97 E-value=7.3e-06 Score=75.12 Aligned_cols=35 Identities=29% Similarity=0.418 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~ 41 (388)
++||+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 58999999999999999999999999999998753
No 268
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.95 E-value=2.8e-05 Score=69.74 Aligned_cols=100 Identities=21% Similarity=0.198 Sum_probs=68.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ....+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~l--- 196 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENAY--- 196 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHHH---
Confidence 3689999999999999999999999999999865321 01222
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
.+.+++.++++ +++++++.+..++ .....|.+.+... |+. .++.+|.||+|+|. .|+.
T Consensus 197 -~~~l~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G~--~p~~ 254 (319)
T 3cty_A 197 -VQEIKKRNIPY--IMNAQVTEIVGDG-KKVTGVKYKDRTT-GEE--KLIETDGVFIYVGL--IPQT 254 (319)
T ss_dssp -HHHHHHTTCCE--ECSEEEEEEEESS-SSEEEEEEEETTT-CCE--EEECCSEEEECCCE--EECC
T ss_pred -HHHHhcCCcEE--EcCCeEEEEecCC-ceEEEEEEEEcCC-Cce--EEEecCEEEEeeCC--ccCh
Confidence 22334567776 8999999998653 1122344442100 121 57999999999994 5654
No 269
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.92 E-value=7.9e-06 Score=77.00 Aligned_cols=41 Identities=24% Similarity=0.312 Sum_probs=38.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK 47 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~ 47 (388)
.+||+|||+|.+|+++|..|++.|++|+++|+++..||.+.
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETA 60 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcc
Confidence 48999999999999999999999999999999999998644
No 270
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.91 E-value=3.1e-05 Score=69.83 Aligned_cols=103 Identities=22% Similarity=0.275 Sum_probs=69.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ..+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~----------------------------------~~-~~~--- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR----------------------------------AS-KIM--- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------SC-HHH---
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC----------------------------------cc-HHH---
Confidence 4689999999999999999999999999999876321 00 111
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcE-EEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
.+...++.++++ ++++++..+..+++.... .|.+.+... |+. .++.+|.||+|+| .+|+..
T Consensus 201 ~~~~~~~~gv~i--~~~~~v~~i~~~~~~~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~~ 262 (333)
T 1vdc_A 201 QQRALSNPKIDV--IWNSSVVEAYGDGERDVLGGLKVKNVVT-GDV--SDLKVSGLFFAIG--HEPATK 262 (333)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESSSSSSEEEEEEEETTT-CCE--EEEECSEEEECSC--EEESCG
T ss_pred HHHHHhCCCeeE--ecCCceEEEeCCCCccceeeEEEEecCC-Cce--EEEecCEEEEEeC--CccchH
Confidence 123345567666 889999998865411032 255443111 122 6799999999999 466543
No 271
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.88 E-value=5e-05 Score=68.62 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=68.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. ..+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----------------------------------~~-~~~--- 196 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----------------------------------AS-KIM--- 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----------------------------------SC-TTH---
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----------------------------------cc-HHH---
Confidence 4689999999999999999999999999999876321 00 011
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
.+...++.++++ ++++++..++.++ +...|.+.+... |+. .++.+|.||+|+| .+|+..
T Consensus 197 ~~~~~~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~~ 255 (335)
T 2a87_A 197 LDRARNNDKIRF--LTNHTVVAVDGDT--TVTGLRVRDTNT-GAE--TTLPVTGVFVAIG--HEPRSG 255 (335)
T ss_dssp HHHHHHCTTEEE--ECSEEEEEEECSS--SCCEEEEEEETT-SCC--EEECCSCEEECSC--EEECCT
T ss_pred HHHHhccCCcEE--EeCceeEEEecCC--cEeEEEEEEcCC-Cce--EEeecCEEEEccC--CccChh
Confidence 123334567666 8899999887543 222344432100 121 6899999999999 466543
No 272
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.88 E-value=8.1e-05 Score=66.93 Aligned_cols=100 Identities=15% Similarity=0.097 Sum_probs=71.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|++.+.+|+++++.+.+. .....
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~-----------------------------------~~~~~--- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR-----------------------------------AHEHS--- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS-----------------------------------SCHHH---
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC-----------------------------------ccHHH---
Confidence 4689999999999999999999999999999876321 01111
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
+ ..+++.++++ +.++++..+...+ +...|.+.+... ++. .++.+|.||+|+| ..|..+
T Consensus 196 ~-~~l~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~~~~D~vv~a~G--~~p~~~ 253 (332)
T 3lzw_A 196 V-ENLHASKVNV--LTPFVPAELIGED--KIEQLVLEEVKG-DRK--EILEIDDLIVNYG--FVSSLG 253 (332)
T ss_dssp H-HHHHHSSCEE--ETTEEEEEEECSS--SCCEEEEEETTS-CCE--EEEECSEEEECCC--EECCCG
T ss_pred H-HHHhcCCeEE--EeCceeeEEecCC--ceEEEEEEecCC-Cce--EEEECCEEEEeec--cCCCch
Confidence 1 2245667776 8899999988654 344566655322 222 6799999999999 466543
No 273
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.86 E-value=3.2e-05 Score=69.00 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=70.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+++|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. ..+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------~~----~~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR----------------------------------AA----PST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB----------------------------------SC----HHH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC----------------------------------CC----HHH
Confidence 4689999999999999999999999999999876321 01 123
Q ss_pred HHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc--ccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 016519 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (388)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~d~li~AtG~~s~p~~~ 154 (388)
++...++.++++ ++++++..+...+ +....|.+. ++ +. .++.+|.||+|+| ..|+..
T Consensus 189 ~~~~~~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~~g----~~--~~~~~D~vv~a~G--~~p~~~ 247 (315)
T 3r9u_A 189 VEKVKKNEKIEL--ITSASVDEVYGDK-MGVAGVKVKLKDG----SI--RDLNVPGIFTFVG--LNVRNE 247 (315)
T ss_dssp HHHHHHCTTEEE--ECSCEEEEEEEET-TEEEEEEEECTTS----CE--EEECCSCEEECSC--EEECCG
T ss_pred HHHHHhcCCeEE--EeCcEEEEEEcCC-CcEEEEEEEcCCC----Ce--EEeecCeEEEEEc--CCCCch
Confidence 344445667766 8899999997654 122234444 43 22 5899999999999 466543
No 274
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.86 E-value=6.7e-06 Score=76.40 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=72.8
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhH-----HH----------hhcC---ChhhHHHHHHHHHHHHh
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGL-----VL----------LRYV---PCGGVDTLMVMLSRLVY 248 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~-----~~----------~~~~---~~~~~~~~~~~~~~~~~ 248 (388)
.+|+|||+|.+|+.+|..+++.|.+|+++.+.+...-.. .. .+++ +......+..+......
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 369999999999999999999999999999987321000 00 0111 11011111000000000
Q ss_pred cCccccccCCC--CCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEE-c-----Ce--EEeeCCcEEeccEE
Q 016519 249 GDLSKYGIHKP--REGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR-G-----NE--VIFENGHSHHFDSI 316 (388)
Q Consensus 249 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~-~-----~~--v~~~~g~~~~~D~v 316 (388)
...++.++... ..+..+.. .....+...+.+.+++.+++++.+ ++++. . +. |.+.++ ++.+|.|
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~---~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~V 160 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCD---EGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNL 160 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEET---TCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEE
T ss_pred HHHHhCCCceEECcCCEEccC---CCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEE
Confidence 01111222110 11111100 012233345566667778999887 77775 2 32 444454 7999999
Q ss_pred EEccCCCCC
Q 016519 317 VFCTGFKRS 325 (388)
Q Consensus 317 i~atG~~~~ 325 (388)
|+|||..+.
T Consensus 161 VlAtG~~s~ 169 (401)
T 2gqf_A 161 IVATGGLSM 169 (401)
T ss_dssp EECCCCSSC
T ss_pred EECCCCccC
Confidence 999999874
No 275
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.83 E-value=1.2e-05 Score=78.94 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=36.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccc
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~ 46 (388)
.+||+|||||++|+++|..|++.|++|+|||+.+..+|.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 5899999999999999999999999999999998887644
No 276
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.82 E-value=1.2e-05 Score=73.23 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=31.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 379999999999999999999999999999987
No 277
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.82 E-value=1.5e-05 Score=79.05 Aligned_cols=40 Identities=33% Similarity=0.391 Sum_probs=37.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI 45 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 45 (388)
..+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 145 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 4589999999999999999999999999999999988874
No 278
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.80 E-value=3e-05 Score=74.63 Aligned_cols=132 Identities=17% Similarity=0.133 Sum_probs=76.0
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhH----HHh-------------------hc--------CCh-
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGL----VLL-------------------RY--------VPC- 233 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~----~~~-------------------~~--------~~~- 233 (388)
..+|+|||+|++|+.+|..|++.|.+|+++.+.+....-. ..+ .+ +..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4679999999999999999999999999999986331000 000 00 000
Q ss_pred -hhHHHHHHHHHHHHhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-----eEEe
Q 016519 234 -GGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIF 305 (388)
Q Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~ 305 (388)
.........+...-. .........|..+.. ..+.+...+.+.+++.+++++.+ |+++..+ +|.+
T Consensus 187 ~~~~~~v~~~~~~~G~-~~~i~~~~~p~~G~~-------~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l 258 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGA-PEEILYVSKPHIGTF-------KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL 258 (549)
T ss_dssp TCHHHHHHHHHHHTTC-CGGGGTBSSCCCCHH-------HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEE
T ss_pred cccHHHHHHHHHHcCC-CceEeeccccccccc-------hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEE
Confidence 000111111110000 000000000111000 01233344566667778999988 7777532 3777
Q ss_pred eCCcEEeccEEEEccCCCCC
Q 016519 306 ENGHSHHFDSIVFCTGFKRS 325 (388)
Q Consensus 306 ~~g~~~~~D~vi~atG~~~~ 325 (388)
.+|+++.+|.||+|+|..+.
T Consensus 259 ~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 259 SNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp TTSCEEECSCEEECCCTTCH
T ss_pred CCCCEEECCEEEECCCCChh
Confidence 88999999999999999884
No 279
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.79 E-value=1.1e-05 Score=73.56 Aligned_cols=34 Identities=26% Similarity=0.514 Sum_probs=31.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcC------CCEEEEeecCC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQS------IPYVILERENC 41 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g------~~v~lie~~~~ 41 (388)
+||+|||||++|+++|+.|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 49999999999999999999998 89999999863
No 280
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.79 E-value=1.9e-05 Score=79.83 Aligned_cols=41 Identities=32% Similarity=0.361 Sum_probs=37.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccc
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~ 46 (388)
..++|+|||||++||++|..|.++|++|+|+|+.+.+||.+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 35799999999999999999999999999999999888743
No 281
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.77 E-value=2.4e-05 Score=74.87 Aligned_cols=127 Identities=17% Similarity=0.138 Sum_probs=73.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHHHhc-CccccccCCCCCCch
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRLVYG-DLSKYGIHKPREGPF 264 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 264 (388)
..+|+|||+|++|+.+|..|++.|.+|+++.+.+.+... ......| ... +.+...-.. ....+. .....
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-~~~~~~~-~~~----~~l~~~g~~~~~~~~~--~~~~~-- 161 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-NVLHLWP-FTI----HDLRALGAKKFYGRFC--TGTLD-- 161 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-CEEECCH-HHH----HHHHTTTHHHHCTTTT--CTTCC--
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-CcccCCh-hHH----HHHHHcCCcccccccc--ccccc--
Confidence 678999999999999999999999999999998733100 0001111 000 111100000 000000 00000
Q ss_pred hhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-------eEEe--e-CC--cEEeccEEEEccCCCCCCc
Q 016519 265 FMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-------EVIF--E-NG--HSHHFDSIVFCTGFKRSTN 327 (388)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-------~v~~--~-~g--~~~~~D~vi~atG~~~~~~ 327 (388)
.+ ....+...+.+.+++.+++++.+ +.++..+ .+.+ . +| +++.+|.||.|+|..+...
T Consensus 162 ---~~--~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 162 ---HI--SIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp ---EE--EHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred ---cC--CHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 00 01223334455666678898887 8877641 3555 3 55 4789999999999987653
No 282
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.75 E-value=2.8e-05 Score=70.56 Aligned_cols=35 Identities=29% Similarity=0.298 Sum_probs=32.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~ 42 (388)
+||+|||||++|+.+|..|+++|++|+|+|+++..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 69999999999999999999999999999987744
No 283
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.74 E-value=0.00011 Score=67.74 Aligned_cols=133 Identities=14% Similarity=0.064 Sum_probs=74.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHHHHHHHH-----Hhc---CccccccC
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLMVMLSRL-----VYG---DLSKYGIH 257 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~ 257 (388)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+...... ....+.......+.+. +.. ......+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~-----~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 85 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFG-----AGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETW 85 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCS-----SEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCC-----ceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEE
Confidence 4689999999999999999999999999999887331000 0000000011111100 000 00000000
Q ss_pred CCCCCchhhh-------hccCCcceeCcchhhhhcCCcEEEecC--ceEEEcC-eEEeeCCcEEeccEEEEccCCCCC
Q 016519 258 KPREGPFFMK-------AAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-EVIFENGHSHHFDSIVFCTGFKRS 325 (388)
Q Consensus 258 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-~v~~~~g~~~~~D~vi~atG~~~~ 325 (388)
.+ +..... ...-.+..+...+.+.+.+.+++++.+ |+.++.+ .+.+.+|+++.+|+||.|+|....
T Consensus 86 ~~--g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 86 MH--NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp ET--TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTCH
T ss_pred eC--CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccHH
Confidence 00 000000 000011223444556666678999887 7777643 577788889999999999998764
No 284
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.73 E-value=2.2e-05 Score=74.12 Aligned_cols=138 Identities=17% Similarity=0.233 Sum_probs=73.6
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhh-----------------HHHhhcCCh--hhH-HHHHHHHHHH
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLG-----------------LVLLRYVPC--GGV-DTLMVMLSRL 246 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~-----------------~~~~~~~~~--~~~-~~~~~~~~~~ 246 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+...-. ......++. .+. ..+..+....
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 46999999999999999999999999999987732100 011111110 000 0000000000
Q ss_pred HhcCccccccCCCCCCchhhhhccCCcceeCcchhhhhcCCcEEEecC--ceEEE--cC---eEEeeCCcEEeccEEEEc
Q 016519 247 VYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR--GN---EVIFENGHSHHFDSIVFC 319 (388)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~--~~---~v~~~~g~~~~~D~vi~a 319 (388)
.....+..++...................+...+.+.+++.+++++.+ |.++. ++ .|.+.+|+++.+|.||+|
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlA 186 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIA 186 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEEC
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEEC
Confidence 000001111110000000000000011223345566667788999887 77775 33 366778878999999999
Q ss_pred cCCCC
Q 016519 320 TGFKR 324 (388)
Q Consensus 320 tG~~~ 324 (388)
+|...
T Consensus 187 tGg~s 191 (447)
T 2i0z_A 187 VGGKS 191 (447)
T ss_dssp CCCSS
T ss_pred CCCCc
Confidence 99887
No 285
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.72 E-value=7.9e-05 Score=74.27 Aligned_cols=101 Identities=11% Similarity=0.024 Sum_probs=71.1
Q ss_pred CCeEEEEC--CChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 7 GVEVIIVG--AGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 7 ~~dv~IIG--aG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
..+|+||| +|..|+.+|..|.+.|.+|+++++.+.+.... ......
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~--------------------------------~~~~~~ 570 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT--------------------------------NNTFEV 570 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG--------------------------------GGGTCH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc--------------------------------ccchhH
Confidence 35799999 99999999999999999999999877432100 001123
Q ss_pred HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCC
Q 016519 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (388)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~ 152 (388)
..+...+++.++++ +.+++|+.++.+ ...+..... ++. .++.+|.||+|+| .+|+
T Consensus 571 ~~l~~~l~~~GV~i--~~~~~V~~i~~~----~~~v~~~~~---~~~--~~i~aD~VV~A~G--~~p~ 625 (690)
T 3k30_A 571 NRIQRRLIENGVAR--VTDHAVVAVGAG----GVTVRDTYA---SIE--RELECDAVVMVTA--RLPR 625 (690)
T ss_dssp HHHHHHHHHTTCEE--EESEEEEEEETT----EEEEEETTT---CCE--EEEECSEEEEESC--EEEC
T ss_pred HHHHHHHHHCCCEE--EcCcEEEEEECC----eEEEEEccC---CeE--EEEECCEEEECCC--CCCC
Confidence 45566667778877 999999988742 233433211 111 6899999999999 4664
No 286
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.72 E-value=3.1e-05 Score=69.24 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=30.5
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
-.|+|||+|+.|+.+|..+++.|.+|+++.+..
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 369999999999999999999999999999765
No 287
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.70 E-value=0.00019 Score=69.00 Aligned_cols=99 Identities=20% Similarity=0.164 Sum_probs=69.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (388)
..+|+|||+|+.|+.+|..|++.+.+|+++++.+.+. .. .+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~~-----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------cC-----HH
Confidence 4699999999999999999999999999999876321 01 23
Q ss_pred HHHHHHh-cCCcceeEeceEEEEEEEeCCCCcE-EEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 87 LDHYVSH-FNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 87 l~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
+.+..++ .++++ +.+++++.+..++ +.. .|.+.+... |+. .++.+|.||+|+| ..|+.
T Consensus 396 l~~~l~~~~gV~v--~~~~~v~~i~~~~--~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~pn~ 455 (521)
T 1hyu_A 396 LQDKVRSLKNVDI--ILNAQTTEVKGDG--SKVVGLEYRDRVS-GDI--HSVALAGIFVQIG--LLPNT 455 (521)
T ss_dssp HHHHHTTCTTEEE--ECSEEEEEEEECS--SSEEEEEEEETTT-CCE--EEEECSEEEECCC--EEESC
T ss_pred HHHHHhcCCCcEE--EeCCEEEEEEcCC--CcEEEEEEEeCCC-Cce--EEEEcCEEEECcC--CCCCc
Confidence 3344444 46665 8899999887643 333 355554211 222 5799999999999 45654
No 288
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.68 E-value=7.1e-05 Score=69.39 Aligned_cols=136 Identities=15% Similarity=0.092 Sum_probs=73.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhHHHhhcCChhhHHHHH-----HHHHHHHhcCccccccCCCCC
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGLVLLRYVPCGGVDTLM-----VMLSRLVYGDLSKYGIHKPRE 261 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 261 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++.......... +.....+.+. +.+.... .......+..+.-
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~-l~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~g 84 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADL-LKPAGIRVVEAAGLLAEVTRRG-GRVRHELEVYHDG 84 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCE-ECHHHHHHHHHTTCHHHHHHTT-CEEECEEEEEETT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceee-ECchHHHHHHHcCcHHHHHHhC-CCcceeEEEeCCC
Confidence 4799999999999999999999999999999873210000000 0110000000 0000000 0000000000000
Q ss_pred Cch----------hhhhccCCcceeCcchhhhhcCC-cEEEecC--ceEEEcC------eEEeeCCcEEeccEEEEccCC
Q 016519 262 GPF----------FMKAAYGKYPVIDAGTCEKIKSG-QIQVLPG--IESIRGN------EVIFENGHSHHFDSIVFCTGF 322 (388)
Q Consensus 262 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~--v~~~~~~------~v~~~~g~~~~~D~vi~atG~ 322 (388)
... ......-.+..+...+.+.+.+. +++++.+ ++.++.+ .+.+.+|+++.+|+||.|+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCT
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCC
Confidence 000 00000111223444556666665 8999887 7777643 466778889999999999998
Q ss_pred CC
Q 016519 323 KR 324 (388)
Q Consensus 323 ~~ 324 (388)
..
T Consensus 165 ~s 166 (399)
T 2x3n_A 165 AS 166 (399)
T ss_dssp TC
T ss_pred Ch
Confidence 65
No 289
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.67 E-value=0.00015 Score=64.63 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999765
No 290
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.62 E-value=0.00017 Score=68.29 Aligned_cols=35 Identities=14% Similarity=0.040 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~ 41 (388)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 47899999999999999999999999999998763
No 291
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.58 E-value=0.0001 Score=71.57 Aligned_cols=140 Identities=16% Similarity=0.157 Sum_probs=74.0
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc-hhhh---hHHHhhcCC-hhhHHHHHHH---HHHHHhcCccccccCC
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP-MVYL---GLVLLRYVP-CGGVDTLMVM---LSRLVYGDLSKYGIHK 258 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~-~~~~---~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~ 258 (388)
-+|+|||+|.+|+++|..+++.|.+|.++.+.. .+.. .+. ..... ..+...+... +........-.+....
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps-~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPA-IGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSE-EECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCcccc-ccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 479999999999999999999999999999874 1110 000 00000 0111111100 0000000000111111
Q ss_pred CCCCchhh-hhccCCcceeCcchhhhhcC-CcEEEecC-ceEEE--cC---eEEeeCCcEEeccEEEEccCCCCCCc
Q 016519 259 PREGPFFM-KAAYGKYPVIDAGTCEKIKS-GQIQVLPG-IESIR--GN---EVIFENGHSHHFDSIVFCTGFKRSTN 327 (388)
Q Consensus 259 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~v~~~~~-v~~~~--~~---~v~~~~g~~~~~D~vi~atG~~~~~~ 327 (388)
...++... .........+...+.+.+++ .+++++.. |+.+. ++ +|.+.+|..+.+|.||+|||..++..
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~ 183 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGV 183 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCE
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCc
Confidence 11111100 00000011233444556666 68988655 77764 23 47778898999999999999876653
No 292
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.57 E-value=9.2e-05 Score=69.38 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=49.9
Q ss_pred hcCCcEEEecC--ceEEEcC----eEEeeCCcEEeccEEEEccC--------CCCCCcccccCCCCccCCCCCcCCCCCC
Q 016519 284 IKSGQIQVLPG--IESIRGN----EVIFENGHSHHFDSIVFCTG--------FKRSTNVWLKGDDSMLNDDGIPKQSYPN 349 (388)
Q Consensus 284 ~~~~~v~~~~~--v~~~~~~----~v~~~~g~~~~~D~vi~atG--------~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 349 (388)
+++.+ +++.+ |++++.+ .|.+.+|+++.+|.||+|+| +.|+.+....+..........++++ ..
T Consensus 214 ~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~-~~ 291 (431)
T 3k7m_X 214 SQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKIL-IH 291 (431)
T ss_dssp HTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEE-EE
T ss_pred HhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEE-EE
Confidence 34445 77776 8888753 35667888899999999999 8887754422221222222234444 23
Q ss_pred CccCCCceEEEeccc
Q 016519 350 HWKGKNGLYCVGLSR 364 (388)
Q Consensus 350 ~~~~~~~vy~~Gd~~ 364 (388)
..+..+++|++||..
T Consensus 292 ~~~~~~~i~~~~d~~ 306 (431)
T 3k7m_X 292 VRGAEAGIECVGDGI 306 (431)
T ss_dssp EESCCTTEEEEBSSS
T ss_pred ECCCCcCceEcCCCC
Confidence 334557899999873
No 293
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.53 E-value=0.00014 Score=67.42 Aligned_cols=34 Identities=32% Similarity=0.452 Sum_probs=32.0
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4589999999999999999999999999999987
No 294
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.51 E-value=6.8e-05 Score=72.65 Aligned_cols=36 Identities=42% Similarity=0.577 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 5 ~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
...+|++|||+|++|+.+|.+|++.|++|+|+|+..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 356999999999999999999999999999999875
No 295
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.51 E-value=0.00017 Score=69.75 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=31.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3479999999999999999999999999999976
No 296
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.50 E-value=0.00019 Score=69.26 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=30.9
Q ss_pred CeEEEECCCCCHHHHHHHHH-hhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLA-NHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~-~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+.+|..|+ +.|.+|+++.+.+
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 47999999999999999999 8999999999976
No 297
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.50 E-value=9.1e-05 Score=66.11 Aligned_cols=32 Identities=31% Similarity=0.553 Sum_probs=30.5
Q ss_pred eEEEECCCCCHHHHHHHHHhh--cCeeEEEEecc
Q 016519 188 NVLVVGSGNSGMEIALDLANH--AAKTSLVIRSP 219 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~--~~~v~~~~r~~ 219 (388)
+|+|||+|.+|+-+|..|++. |.+|+++.+.+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 799999999999999999998 99999999976
No 298
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.47 E-value=0.00025 Score=69.07 Aligned_cols=139 Identities=13% Similarity=0.200 Sum_probs=73.0
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc-hhhh---hHHHhhcCC-hhhHHHHHHH---HHHHHhcCccccccCC
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP-MVYL---GLVLLRYVP-CGGVDTLMVM---LSRLVYGDLSKYGIHK 258 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~-~~~~---~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~ 258 (388)
-+|+|||+|.+|+++|..+++.|.+|.++.+.. .+.. .+. ..... ..+.+.+... +........-.+....
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps-~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPA-IGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSE-EESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccccccc-ccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 479999999999999999999999999999874 1100 000 00000 0111111000 0000000000111111
Q ss_pred CCCCchhhh-hccCCcceeCcchhhhhcC-CcEEEecC-ceEEE--cC---eEEeeCCcEEeccEEEEccCCCCCC
Q 016519 259 PREGPFFMK-AAYGKYPVIDAGTCEKIKS-GQIQVLPG-IESIR--GN---EVIFENGHSHHFDSIVFCTGFKRST 326 (388)
Q Consensus 259 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~v~~~~~-v~~~~--~~---~v~~~~g~~~~~D~vi~atG~~~~~ 326 (388)
...++.... ........+...+.+.+++ .+++++.. |+.+. ++ +|.+.+|..+.+|.||+|||..+..
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 111111000 0000011223344556666 68988666 77774 33 4677788889999999999987654
No 299
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.46 E-value=0.00012 Score=71.25 Aligned_cols=44 Identities=20% Similarity=0.384 Sum_probs=41.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCccccc
Q 016519 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (388)
Q Consensus 5 ~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~ 48 (388)
++.|||+|||+|..|..+|..|++.|.+|++||+++..||.|..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 45699999999999999999999999999999999999998764
No 300
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.46 E-value=0.0004 Score=71.71 Aligned_cols=98 Identities=13% Similarity=0.132 Sum_probs=68.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (388)
.+|+|||+|+.|+.+|..|.+.|.+|+|+++.+.+. ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------------------------~~------ 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------------------------AA------ 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------------------------------HH------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------------------------------hh------
Confidence 689999999999999999999999999999876321 01
Q ss_pred HHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcc--cC-CCCceeeEEEeeCEEEEeecCCCCCCC
Q 016519 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASN--LL-SPGRVIEEYYSGRFLVVASGETSNPFT 153 (388)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~--~~-~~~~~~~~~~~~d~li~AtG~~s~p~~ 153 (388)
...+++.++++ ++++.+..+...+++....|++.+ .. ..|+. .++.+|.||+|+| .+|+.
T Consensus 323 ~~~l~~~GV~v--~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~--~~i~~D~Vv~a~G--~~P~~ 385 (965)
T 2gag_A 323 AAQAVADGVQV--ISGSVVVDTEADENGELSAIVVAELDEARELGGT--QRFEADVLAVAGG--FNPVV 385 (965)
T ss_dssp HHHHHHTTCCE--EETEEEEEEEECTTSCEEEEEEEEECTTCCEEEE--EEEECSEEEEECC--EEECC
T ss_pred HHHHHhCCeEE--EeCCEeEEEeccCCCCEEEEEEEeccccCCCCce--EEEEcCEEEECCC--cCcCh
Confidence 23456678887 999999998763111222344443 00 00111 6799999999999 46654
No 301
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.45 E-value=0.00039 Score=65.48 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCC-EEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~-v~lie~~~ 40 (388)
..+|+|||+|++|+-+|..|++.+.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 46899999999999999999999998 99999865
No 302
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.42 E-value=2e-05 Score=70.86 Aligned_cols=34 Identities=21% Similarity=0.431 Sum_probs=31.3
Q ss_pred CeEEEECCCCCHHHHHHHHHhh--cCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~--~~~v~~~~r~~~ 220 (388)
.+|+|||+|.+|+-+|..|++. |.+|.++.+.+.
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 4699999999999999999998 999999999873
No 303
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.41 E-value=8.8e-05 Score=71.50 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhh-cCCCEEEEeecCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSL-QSIPYVILERENC 41 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~-~g~~v~lie~~~~ 41 (388)
..||+||||||++|+.+|.+|++ .+++|+|+|+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 36999999999999999999998 5789999998753
No 304
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.41 E-value=0.00035 Score=68.03 Aligned_cols=137 Identities=15% Similarity=0.213 Sum_probs=72.9
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc-hhhhhHHHhhcCCh-------hhHHHHHHH---HHHHHhcCcccc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP-MVYLGLVLLRYVPC-------GGVDTLMVM---LSRLVYGDLSKY 254 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~-~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~~~~~ 254 (388)
.-+|+|||+|.+|+++|..+++.|.+|.++.+.. .+.. ..-.|. .+.+.+..+ +........-.+
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~----~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR----MSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC----CccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 4579999999999999999999999999999875 1100 000010 111111100 000000000011
Q ss_pred ccCCCCCCchhh-hhccCCcceeCcchhhhhcC-CcEEEecC-ceEEE--cC---eEEeeCCcEEeccEEEEccCCCCCC
Q 016519 255 GIHKPREGPFFM-KAAYGKYPVIDAGTCEKIKS-GQIQVLPG-IESIR--GN---EVIFENGHSHHFDSIVFCTGFKRST 326 (388)
Q Consensus 255 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~v~~~~~-v~~~~--~~---~v~~~~g~~~~~D~vi~atG~~~~~ 326 (388)
.......++... .........+...+.+.+++ .+++++.. +..+. ++ +|.+.+|+.+.+|.||+|||..++.
T Consensus 97 ~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~ 176 (641)
T 3cp8_A 97 RMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNG 176 (641)
T ss_dssp EEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTC
T ss_pred hhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCc
Confidence 111111111100 00000011223344555665 58888766 66654 33 3677788899999999999987654
No 305
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.40 E-value=7.8e-05 Score=72.04 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=31.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3479999999999999999999999999999987
No 306
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.39 E-value=0.00012 Score=70.15 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=30.6
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
|+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 579999999999999999999999999999876
No 307
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.35 E-value=0.0002 Score=67.61 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
..+|+|||||..|+-+|..+.+.|. +|+++++.+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 4699999999999999999999998 599999876
No 308
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.32 E-value=0.00052 Score=68.13 Aligned_cols=127 Identities=16% Similarity=0.004 Sum_probs=65.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEe--ecCCCCcc--c-ccC----CcCceeeecCCccccCCCCCCCCCCCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILE--RENCYASI--W-KKY----SYDRLRLHLAKQFCQLPHLPFPSSYPMF 77 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie--~~~~~gg~--~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (388)
..+|+|||||+.|+.+|..|++.|.+|+++- .....|.. + ... .++... .......-+.. .+..+...
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~~--~~~~l~~~ 570 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIP-RSPRQIVMLQR--KASKPGQG 570 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCC-CCSSEEEEECS--SCSCTTTT
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccC-CCCcEEEEEEe--cchhhccc
Confidence 4699999999999999999999987665420 00000000 0 000 000000 00000000000 00000000
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCC
Q 016519 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (388)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~AtG~~s~p~ 152 (388)
. ......++....++.++++ +.+++|+.++. +...+. .++ +. .++.+|.||+|+| .+|+
T Consensus 571 l-~~~~~~~~~~~l~~~GV~v--~~~~~v~~i~~----~~v~~~-~~G----~~--~~i~~D~Vi~a~G--~~p~ 629 (671)
T 1ps9_A 571 L-GKTTGWIHRTTLLSRGVKM--IPGVSYQKIDD----DGLHVV-ING----ET--QVLAVDNVVICAG--QEPN 629 (671)
T ss_dssp S-CTTTHHHHHHHHHHTTCEE--ECSCEEEEEET----TEEEEE-ETT----EE--EEECCSEEEECCC--EEEC
T ss_pred c-ccccHHHHHHHHHhcCCEE--EeCcEEEEEeC----CeEEEe-cCC----eE--EEEeCCEEEECCC--cccc
Confidence 0 1123345556667778777 89999988862 333343 343 21 5799999999999 4664
No 309
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.31 E-value=1.3e-05 Score=74.12 Aligned_cols=34 Identities=35% Similarity=0.424 Sum_probs=31.7
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3699999999999999999999999999999883
No 310
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.31 E-value=0.0015 Score=61.68 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHh--------------------hcCC-CEEEEeecCC
Q 016519 7 GVEVIIVGAGPSGLATAACLS--------------------LQSI-PYVILERENC 41 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~--------------------~~g~-~v~lie~~~~ 41 (388)
..+|+|||+|..|+.+|..|+ +.+. +|+|+++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 469999999999999999999 5677 7999998763
No 311
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.30 E-value=0.00011 Score=68.60 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=31.1
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999986
No 312
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.30 E-value=8.4e-05 Score=73.32 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--------CCEEEEeecC-CC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS--------IPYVILEREN-CY 42 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g--------~~v~lie~~~-~~ 42 (388)
.++|+|||||++||++|+.|.+.| ++|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 469999999999999999999998 9999999998 78
No 313
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.30 E-value=0.0003 Score=63.39 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=31.1
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 469999999999999999999999999999886
No 314
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.29 E-value=0.00017 Score=70.00 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcC-CCEEEEeecCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQS-IPYVILERENC 41 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g-~~v~lie~~~~ 41 (388)
..||+||||||.||+.+|.+|++.+ .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4599999999999999999999987 79999999775
No 315
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.28 E-value=0.00013 Score=67.81 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=32.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 185 ~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
+..+|+|||+|.+|+-+|..|++.|.+|+++.|.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 356899999999999999999999999999999873
No 316
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.26 E-value=0.00074 Score=67.64 Aligned_cols=104 Identities=10% Similarity=0.034 Sum_probs=68.6
Q ss_pred CCeEEEEC--CChHHHHHHHHHhhcCCCEEEEeecCCCCcccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 016519 7 GVEVIIVG--AGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (388)
Q Consensus 7 ~~dv~IIG--aG~aGl~~A~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (388)
..+|+||| ||..|+.+|..|++.|.+|+++++.+ +.... .++ .. .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~--------------------------~~~--~~----~ 574 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYM--------------------------HFT--LE----Y 574 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHH--------------------------HHT--TC----H
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccc--------------------------ccc--cc----H
Confidence 46899999 99999999999999999999999876 32100 000 01 2
Q ss_pred HHHHHHHHhcCCcceeEeceEEEEEEEeCCCCcEEEEEc--ccCC-------------CCceeeEEEeeCEEEEeecCCC
Q 016519 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLS-------------PGRVIEEYYSGRFLVVASGETS 149 (388)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~--~~~~-------------~~~~~~~~~~~d~li~AtG~~s 149 (388)
..+.+..++.++++ +++++++.++. +...+... ++.. .++. .++.+|.||+|+| .
T Consensus 575 ~~~~~~l~~~GV~i--~~~~~v~~i~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~aD~Vv~a~G--~ 644 (729)
T 1o94_A 575 PNMMRRLHELHVEE--LGDHFCSRIEP----GRMEIYNIWGDGSKRTYRGPGVSPRDANTSH--RWIEFDSLVLVTG--R 644 (729)
T ss_dssp HHHHHHHHHTTCEE--ECSEEEEEEET----TEEEEEETTCSCSCCCCCCTTSCSSCCCCCC--EEEECSEEEEESC--E
T ss_pred HHHHHHHHhCCCEE--EcCcEEEEEEC----CeEEEEEecCCceEEecccccccccccCCcc--eeeeCCEEEECCC--C
Confidence 34445556678877 89999988863 22333321 1100 0111 3599999999999 4
Q ss_pred CCCC
Q 016519 150 NPFT 153 (388)
Q Consensus 150 ~p~~ 153 (388)
.|+.
T Consensus 645 ~p~~ 648 (729)
T 1o94_A 645 HSEC 648 (729)
T ss_dssp EECC
T ss_pred CCCh
Confidence 6653
No 317
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.23 E-value=0.00012 Score=71.11 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=31.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 4699999999999999999999999999999873
No 318
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.23 E-value=0.00039 Score=64.44 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=31.2
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
+|+|||+|++|+-+|..|++.|.+|+++.|.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 799999999999999999999999999998773
No 319
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.22 E-value=0.00082 Score=62.17 Aligned_cols=35 Identities=29% Similarity=0.408 Sum_probs=32.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
..+|+|||+|.+|+-+|..|++.|.+|+++.|.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46899999999999999999999999999999873
No 320
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.22 E-value=0.00016 Score=69.83 Aligned_cols=35 Identities=37% Similarity=0.473 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~ 42 (388)
.||+||||||++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4899999999999999999999 9999999997654
No 321
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.22 E-value=0.00026 Score=64.10 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=30.2
Q ss_pred eEEEECCCCCHHHHHHHHHh---hcCeeEEEEecc
Q 016519 188 NVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSP 219 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~---~~~~v~~~~r~~ 219 (388)
+|+|||+|.+|+-+|..|++ .|.+|+++.+++
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 69999999999999999999 899999999875
No 322
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.21 E-value=0.0002 Score=65.29 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=31.1
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999985
No 323
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.20 E-value=0.00062 Score=66.26 Aligned_cols=35 Identities=34% Similarity=0.608 Sum_probs=32.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
..+|+|||+|.+|+.+|..+++.|.+|+++.+.+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~ 160 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPV 160 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 34799999999999999999999999999998873
No 324
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.19 E-value=0.00029 Score=67.42 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=33.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~ 42 (388)
..+|++|||+|++|+.+|..|.+.|++|+|+|+....
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999987744
No 325
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.16 E-value=0.00082 Score=65.45 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=32.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 5689999999999999999999999999999985
No 326
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.16 E-value=0.0018 Score=61.07 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--------------------CC-CEEEEeecCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ--------------------SI-PYVILERENC 41 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~--------------------g~-~v~lie~~~~ 41 (388)
..+|+|||+|+.|+.+|..|.+. +. +|+++++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 36899999999999999999974 54 9999998763
No 327
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.15 E-value=0.00034 Score=64.65 Aligned_cols=138 Identities=18% Similarity=0.162 Sum_probs=72.7
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecchhhhhH-HHhhcCChhhHHHHHH-----HHHHHHhcCccccccCCCCC
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSPMVYLGL-VLLRYVPCGGVDTLMV-----MLSRLVYGDLSKYGIHKPRE 261 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 261 (388)
+|+|||+|.+|+-+|..|++.|.+|+++.+.+...... .....+.....+.+.. .+..... ......+.....
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~-~~~~~~~~~~~~ 82 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGL-VHEGVEIAFAGQ 82 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCE-EESCEEEEETTE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCC-ccceEEEEECCc
Confidence 69999999999999999999999999999987320000 0000111111111100 0000000 000000000000
Q ss_pred C-chhhhhcc-C------CcceeCcchhhhhcCCcEEEecC--ceEEEcC-----eEEe-eCCc--EEeccEEEEccCCC
Q 016519 262 G-PFFMKAAY-G------KYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIF-ENGH--SHHFDSIVFCTGFK 323 (388)
Q Consensus 262 ~-~~~~~~~~-~------~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~-~~g~--~~~~D~vi~atG~~ 323 (388)
. .+...... . ..+.+...+.+.+.+.+++++.+ ++.++.+ .+.+ .+|+ ++.+|+||.|+|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~ 162 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFH 162 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCC
Confidence 0 00000000 0 11223344555555668888888 7777642 3666 6887 78999999999987
Q ss_pred CCC
Q 016519 324 RST 326 (388)
Q Consensus 324 ~~~ 326 (388)
...
T Consensus 163 S~v 165 (394)
T 1k0i_A 163 GIS 165 (394)
T ss_dssp CST
T ss_pred cHH
Confidence 654
No 328
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.12 E-value=0.0003 Score=68.20 Aligned_cols=35 Identities=37% Similarity=0.566 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhc-CCCEEEEeecC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQ-SIPYVILEREN 40 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~-g~~v~lie~~~ 40 (388)
..||+||||||.+|+.+|.+|++. +.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 358999999999999999999975 78999999876
No 329
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.04 E-value=0.0031 Score=65.64 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
.+|+|||||..|+.+|..+.+.|. +|+++++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 499999999999999999999996 899999875
No 330
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.04 E-value=0.00067 Score=65.95 Aligned_cols=34 Identities=35% Similarity=0.602 Sum_probs=31.6
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
-+|+|||+|.+|+-+|..+++.|.+|+++.+.+.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~ 155 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPF 155 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4799999999999999999999999999998873
No 331
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.03 E-value=0.00079 Score=61.79 Aligned_cols=33 Identities=24% Similarity=0.500 Sum_probs=31.0
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 469999999999999999999999999999875
No 332
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.02 E-value=0.00069 Score=53.64 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=33.2
Q ss_pred CcccCCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 1 m~~~~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
|++.....+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4555556799999999999999999999999999999865
No 333
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.02 E-value=0.00078 Score=61.81 Aligned_cols=34 Identities=29% Similarity=0.360 Sum_probs=31.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 3479999999999999999999999999999876
No 334
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.02 E-value=0.00048 Score=65.96 Aligned_cols=36 Identities=28% Similarity=0.436 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~ 41 (388)
..+|++|||+|++|+.+|..|.+.|.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 358999999999999999999999999999998763
No 335
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.97 E-value=0.00062 Score=65.82 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=31.5
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
.+|+|||+|.+|+.+|..|++.|.+|+++.+.+.
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~ 50 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGD 50 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 4799999999999999999999999999999873
No 336
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.95 E-value=0.0012 Score=65.57 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=31.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3689999999999999999999999999999864
No 337
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.90 E-value=0.00039 Score=67.26 Aligned_cols=36 Identities=28% Similarity=0.419 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHhh-cCCCEEEEeecCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILERENCY 42 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~-~g~~v~lie~~~~~ 42 (388)
.||++|||||++|+.+|.+|++ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 68999999987643
No 338
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.90 E-value=0.00069 Score=64.99 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=31.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999987
No 339
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.88 E-value=0.0021 Score=61.53 Aligned_cols=44 Identities=9% Similarity=0.239 Sum_probs=35.6
Q ss_pred cchhhhhcCCcEEEecC--ceEEEcC--eEEeeCCcEEeccEEEEccC
Q 016519 278 AGTCEKIKSGQIQVLPG--IESIRGN--EVIFENGHSHHFDSIVFCTG 321 (388)
Q Consensus 278 ~~~~~~~~~~~v~~~~~--v~~~~~~--~v~~~~g~~~~~D~vi~atG 321 (388)
+.+.+.+.+.++++..+ |+++..+ .+++.+|+++.+|.||.++.
T Consensus 226 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 226 IAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHTSCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCC
Confidence 34455677789999888 8888754 68899999999999999875
No 340
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.85 E-value=0.00045 Score=65.18 Aligned_cols=34 Identities=32% Similarity=0.482 Sum_probs=31.6
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 3699999999999999999999999999999873
No 341
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.83 E-value=0.0008 Score=65.56 Aligned_cols=36 Identities=31% Similarity=0.443 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhh-cCCCEEEEeecCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSL-QSIPYVILERENC 41 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~-~g~~v~lie~~~~ 41 (388)
..+|++|||+|++|+.+|..|++ .+.+|+|+|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 35899999999999999999999 7999999998753
No 342
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.80 E-value=0.00095 Score=63.74 Aligned_cols=35 Identities=26% Similarity=0.426 Sum_probs=32.3
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
..+|+|||+|++|+-+|..|++.|.+|+++.+.+.
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 46 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQ 46 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 45799999999999999999999999999999873
No 343
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=96.80 E-value=0.0012 Score=64.35 Aligned_cols=34 Identities=26% Similarity=0.479 Sum_probs=31.4
Q ss_pred CeEEEECCCCCHHHHHHHHHhh------cCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANH------AAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~------~~~v~~~~r~~~ 220 (388)
-+|+|||+|.+|+-+|..|++. |.+|+++.+.+.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~ 75 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 75 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCC
Confidence 4699999999999999999999 999999999873
No 344
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.77 E-value=0.00094 Score=63.80 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=32.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
..+|+|||+|++|+-+|..|++.|.+|+++.+.+.
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE 45 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 44699999999999999999999999999999873
No 345
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.75 E-value=0.00094 Score=64.51 Aligned_cols=37 Identities=30% Similarity=0.399 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhc-CCCEEEEeecCCC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCY 42 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~-g~~v~lie~~~~~ 42 (388)
..+|++|||+|++|+.+|..|++. +.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 358999999999999999999998 8999999987543
No 346
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.75 E-value=0.0011 Score=66.11 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=31.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4579999999999999999999999999999964
No 347
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.75 E-value=0.0019 Score=59.04 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=30.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.++|+|||+|.+|+-+|..|+ .|.+|+++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 567999999999999999999 599999999985
No 348
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.74 E-value=0.0015 Score=63.53 Aligned_cols=35 Identities=29% Similarity=0.599 Sum_probs=32.0
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
..+|+|||+|.+|+.+|..+++.|.+|+++.+.+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~ 160 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPI 160 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 44799999999999999999999999999998873
No 349
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.73 E-value=0.0014 Score=60.48 Aligned_cols=34 Identities=24% Similarity=0.448 Sum_probs=31.4
Q ss_pred CCeEEEECCCCCHHHHHHHHHh-hc-CeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLAN-HA-AKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~-~~-~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++ .| .+|+++.+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 3479999999999999999999 99 8999999887
No 350
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.65 E-value=0.0017 Score=54.50 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=32.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 184 ~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
+.+++|+|||+|.+|...+..|.+.|.+|+++.+..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 468999999999999999999999999999998654
No 351
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.64 E-value=0.0038 Score=59.72 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=31.5
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
-.|+|||+|.+|+-+|..+++.|.+|.++.+.+.
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~ 75 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTSG 75 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3699999999999999999999999999998874
No 352
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.61 E-value=0.00014 Score=67.02 Aligned_cols=33 Identities=36% Similarity=0.458 Sum_probs=31.1
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
.|+|||+|++|+-+|..|++.|.+|+++.|++.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 599999999999999999999999999999873
No 353
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.60 E-value=0.0057 Score=58.96 Aligned_cols=34 Identities=29% Similarity=0.437 Sum_probs=31.4
Q ss_pred CCeEEEECCCCCHHHHHHHHHh---hcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~---~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++ .|.+|+++.+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 4579999999999999999999 899999999965
No 354
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.59 E-value=0.0012 Score=63.73 Aligned_cols=34 Identities=38% Similarity=0.553 Sum_probs=31.8
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.|.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4799999999999999999999999999999873
No 355
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.55 E-value=0.0031 Score=60.59 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHh------------hcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLAN------------HAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~------------~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4589999999999999999999 789999999865
No 356
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.50 E-value=0.0048 Score=59.02 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=29.5
Q ss_pred CeEEEECCCCCHHHHHHHHHh---hcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~---~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 479999999999999999999 999999999876
No 357
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.48 E-value=0.0014 Score=62.56 Aligned_cols=32 Identities=25% Similarity=0.466 Sum_probs=30.0
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+.+|..|++. .+|+++.+.+
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCC
Confidence 4699999999999999999999 9999999887
No 358
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.45 E-value=0.012 Score=56.73 Aligned_cols=33 Identities=33% Similarity=0.698 Sum_probs=30.4
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
-+|+|||+|.+|+-+|..+++ |.+|.++.+.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 369999999999999999999 999999999874
No 359
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.43 E-value=0.0047 Score=47.81 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34689999999999999999999999999999875
No 360
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.27 E-value=0.046 Score=52.04 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~ 40 (388)
.++|+|||+|.+|+.++..|++. +.+|+++-|.+
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 46899999999999999999876 67999998876
No 361
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.24 E-value=0.0069 Score=57.82 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=30.8
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 369999999999999999999999999999875
No 362
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.14 E-value=0.0058 Score=46.96 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.++|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999854
No 363
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.09 E-value=0.026 Score=54.95 Aligned_cols=33 Identities=24% Similarity=0.497 Sum_probs=31.0
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
.|+|||+|.+|+-+|..+++.|.+|.++.+.+.
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~ 41 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVFP 41 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 699999999999999999999999999999863
No 364
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.06 E-value=0.017 Score=56.39 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=31.0
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
.|+|||+|.+|+-+|..+++.|.+|.++.+...
T Consensus 20 DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 20 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 699999999999999999999999999999763
No 365
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.99 E-value=0.0084 Score=46.31 Aligned_cols=33 Identities=15% Similarity=0.344 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+++|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 589999999999999999999999999999865
No 366
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.98 E-value=0.0071 Score=61.57 Aligned_cols=34 Identities=18% Similarity=0.472 Sum_probs=31.3
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcC-eeEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~-~v~~~~r~~~ 220 (388)
.+|+|||+|.+|+-+|..|++.|. +|+++.+...
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 469999999999999999999998 8999998763
No 367
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.86 E-value=0.012 Score=46.19 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+++|+|+|..|..++..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 589999999999999999999999999999863
No 368
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.85 E-value=0.0082 Score=44.50 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC-CCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g-~~v~lie~~~ 40 (388)
..+|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 368999999999999999999999 8999999864
No 369
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.85 E-value=0.0037 Score=53.91 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=30.6
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.|+|||+|++|+-+|..|++.|.+|+++.+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999876
No 370
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.81 E-value=0.039 Score=53.78 Aligned_cols=33 Identities=27% Similarity=0.480 Sum_probs=30.7
Q ss_pred eEEEECCCCCHHHHHHHHHhhc--CeeEEEEecch
Q 016519 188 NVLVVGSGNSGMEIALDLANHA--AKTSLVIRSPM 220 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~--~~v~~~~r~~~ 220 (388)
.|+|||+|.+|+-+|..|++.| .+|+++.+.+.
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 5999999999999999999999 99999999763
No 371
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.74 E-value=0.01 Score=56.08 Aligned_cols=31 Identities=23% Similarity=0.507 Sum_probs=29.4
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEec
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~ 218 (388)
.|+|||+|.+|+-+|..+++.|.+|+++.+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4899999999999999999999999999987
No 372
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.41 E-value=0.012 Score=52.14 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||+|..|...|..++..|++|+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999865
No 373
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.36 E-value=0.021 Score=46.25 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-CCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~-g~~v~lie~~~ 40 (388)
..+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35899999999999999999999 99999999865
No 374
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.31 E-value=0.019 Score=44.18 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|+|+|+|..|..++..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999854
No 375
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.20 E-value=0.0067 Score=59.76 Aligned_cols=33 Identities=33% Similarity=0.565 Sum_probs=31.2
Q ss_pred CeEEEECCCCCHHHHHHHHHh-hcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLAN-HAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~-~~~~v~~~~r~~ 219 (388)
.+|+|||+|++|+-+|..|++ .|.+|+++.+.+
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 469999999999999999999 999999999987
No 376
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.04 E-value=0.019 Score=48.00 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=30.4
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 9 EVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999865
No 377
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.03 E-value=0.026 Score=47.18 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
...|+|||||..|...+..|.+.|.+|+|+++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4799999999999999999999999999999753
No 378
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.98 E-value=0.021 Score=50.43 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=32.0
Q ss_pred CcccCCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 1 m~~~~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
|+......+|.|||.|..|...|..|++.|++|+++|+++
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4444455799999999999999999999999999999865
No 379
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.95 E-value=0.022 Score=50.86 Aligned_cols=33 Identities=36% Similarity=0.399 Sum_probs=30.9
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|.|||+|..|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999876
No 380
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.89 E-value=0.028 Score=50.32 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
+.+|+|||||..|.++|..|++.|+ +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4699999999999999999999998 999999865
No 381
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.86 E-value=0.022 Score=49.20 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
...|+|||||..|...+..|.+.|.+|+||++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4789999999999999999999999999999865
No 382
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.68 E-value=0.031 Score=52.46 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4799999999999999999999999999999865
No 383
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.64 E-value=0.024 Score=53.02 Aligned_cols=36 Identities=19% Similarity=0.395 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~ 42 (388)
.++|.|||.|.+|+++|..|.++|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 368999999999999999999999999999987644
No 384
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.58 E-value=0.034 Score=50.81 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4699999999999999999999999999999876
No 385
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.44 E-value=0.047 Score=48.30 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
...+|.|||.|..|...|..|.+.|++|+++|+++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999865
No 386
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.36 E-value=0.043 Score=48.45 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 387
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.35 E-value=0.041 Score=48.85 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=30.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|.|||+|..|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 469999999999999999999999999999876
No 388
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.34 E-value=0.067 Score=50.17 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=33.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 184 ~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
+.+++|.|||.|.+|+-+|..|.+.|.+|+...++.
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 458899999999999999999999999999999866
No 389
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.33 E-value=0.037 Score=49.22 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCC--CEEEEeecC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~ 40 (388)
.+.+|+|||+|..|.++|..|+..++ +++++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35799999999999999999999987 899999764
No 390
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.31 E-value=0.039 Score=49.16 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|+|||+|..|.+.|..|.+.|++|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999864
No 391
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.28 E-value=0.04 Score=43.22 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=33.1
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 183 PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 183 ~~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
...+++++|+|+|..|..++..|...|.+|+++.|++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3347899999999999999999999999999999887
No 392
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.21 E-value=0.023 Score=52.98 Aligned_cols=34 Identities=24% Similarity=0.462 Sum_probs=31.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.++|+|||+|++|+-+|..|++.|.+|+++.+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999887
No 393
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.21 E-value=0.041 Score=48.08 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 589999999999999999999999999999865
No 394
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.17 E-value=0.048 Score=48.50 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999865
No 395
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.16 E-value=0.039 Score=49.98 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4699999999999999999999999999999875
No 396
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.08 E-value=0.044 Score=50.72 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
...+|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34699999999999999999998 99999999865
No 397
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.05 E-value=0.047 Score=49.43 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
+.+|+|+|||.+|+.+|..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4799999999999999999999999 999999874
No 398
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.96 E-value=0.051 Score=47.46 Aligned_cols=33 Identities=18% Similarity=0.123 Sum_probs=30.8
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCEEEEeecCC
Q 016519 9 EVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~ 41 (388)
+|.|||+|..|...|..|.+.|++|+++++...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998763
No 399
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.94 E-value=0.055 Score=44.90 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~ 41 (388)
..+|.|||+|..|.+.|..|.+.|++|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998753
No 400
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.92 E-value=0.032 Score=52.42 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=32.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 184 ~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
+++++|+|||+|.+|...+..|.+.|.+|+++.+..
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 358899999999999999999999999999999654
No 401
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.88 E-value=0.046 Score=48.53 Aligned_cols=33 Identities=33% Similarity=0.397 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|+|||+|..|.+.|..|.+.|++|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999999865
No 402
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.85 E-value=0.054 Score=48.17 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC--CEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~ 40 (388)
..+|+|||+|..|.++|..|++.|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4699999999999999999999998 999999854
No 403
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.85 E-value=0.051 Score=51.30 Aligned_cols=34 Identities=29% Similarity=0.542 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.++|+|||+|..|+..|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4799999999999999999999999999999864
No 404
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.84 E-value=0.079 Score=47.30 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=30.9
Q ss_pred CCeEEEECCCCCHHH-HHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGME-IALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e-~a~~l~~~~~~v~~~~r~~ 219 (388)
.++|.|||.|.+|+. +|..|.++|.+|++..++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468999999999996 8899999999999999876
No 405
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.82 E-value=0.032 Score=43.19 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||+|..|..++..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 406
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.69 E-value=0.071 Score=47.81 Aligned_cols=40 Identities=20% Similarity=0.150 Sum_probs=33.1
Q ss_pred CcccCCCCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 1 m~~~~~~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
|+..+...+|.|||.|-.|-+.|..|.+.|++|+++|+++
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5544556789999999999999999999999999999865
No 407
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.61 E-value=0.046 Score=47.24 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=33.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 184 ~~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
+++++|+|||+|.+|...+..|.+.|++|+++.+..
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 358899999999999999999999999999999765
No 408
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.61 E-value=0.066 Score=47.62 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
..+|+|||+|..|.+.|..|++.|+ +|+++|++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3689999999999999999999998 999999864
No 409
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.61 E-value=0.035 Score=50.53 Aligned_cols=33 Identities=33% Similarity=0.394 Sum_probs=30.7
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
++|+|||+|..|+++|..+++.|.+|.++.+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999765
No 410
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.58 E-value=0.065 Score=48.44 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCC-CEEEEeec
Q 016519 6 AGVEVIIVGAGPSGLATAACLSLQSI-PYVILERE 39 (388)
Q Consensus 6 ~~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~ 39 (388)
...+|+|+|||.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35799999999999999999999998 89999987
No 411
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.55 E-value=0.063 Score=47.16 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|+|||+|..|.+.|..|.+.|.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999874
No 412
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.53 E-value=0.038 Score=51.23 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=30.9
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999875
No 413
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.51 E-value=0.082 Score=47.02 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=29.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 185 ~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
...+|.|||+|..|.-+|..|++.|.+|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3678999999999999999999999999999 665
No 414
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.49 E-value=0.044 Score=50.32 Aligned_cols=33 Identities=27% Similarity=0.510 Sum_probs=31.1
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecch
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSPM 220 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~~ 220 (388)
+|+|||+|.+|+-+|..|++.|.+|+++.+.+.
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 699999999999999999999999999999863
No 415
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.47 E-value=0.042 Score=51.64 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.++|+|+|+|-.|..+|..|...|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4789999999999999999999999999999875
No 416
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.41 E-value=0.066 Score=45.77 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
.+|+|||+|..|..+|..|++.|+ +++|+|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 689999999999999999999998 899999865
No 417
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.38 E-value=0.081 Score=47.24 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
+.+|+|||||..|.++|..|+..|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3689999999999999999999998 999999865
No 418
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.36 E-value=0.067 Score=50.07 Aligned_cols=33 Identities=21% Similarity=0.504 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
++|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999875
No 419
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.35 E-value=0.039 Score=51.11 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=30.5
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 69999999999999999999999999999876
No 420
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.34 E-value=0.071 Score=49.04 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||+|..|+.++..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999865
No 421
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.31 E-value=0.084 Score=47.00 Aligned_cols=33 Identities=18% Similarity=0.385 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
.+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 689999999999999999999998 999999764
No 422
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.29 E-value=0.081 Score=46.85 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|.|||.|..|...|..|++.|++|+++|+.+
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 423
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.28 E-value=0.076 Score=49.49 Aligned_cols=35 Identities=26% Similarity=0.499 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~ 41 (388)
..++.|||.|..|+..|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47999999999999999999999999999999774
No 424
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=93.27 E-value=0.046 Score=49.94 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=31.0
Q ss_pred eEEEECCCCCHHHHHHHHHhh--cCeeEEEEecch
Q 016519 188 NVLVVGSGNSGMEIALDLANH--AAKTSLVIRSPM 220 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~--~~~v~~~~r~~~ 220 (388)
+|+|||+|.+|+-+|..|++. |.+|+++.+.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 699999999999999999999 999999999874
No 425
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.26 E-value=0.087 Score=47.01 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHH-HHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLA-TAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~-~A~~l~~~g~~v~lie~~~ 40 (388)
..+|.|||.|.+|++ +|..|.++|++|++.|.+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468999999999996 7889999999999999865
No 426
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.26 E-value=0.09 Score=47.53 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 427
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.25 E-value=0.092 Score=44.72 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 5799999999999999999999999999999865
No 428
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.20 E-value=0.082 Score=47.38 Aligned_cols=32 Identities=34% Similarity=0.408 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeec
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERE 39 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~ 39 (388)
.+|+|||+|..|.+.|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999999999999985
No 429
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.19 E-value=0.076 Score=46.92 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999999999999999854
No 430
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.18 E-value=0.099 Score=48.79 Aligned_cols=33 Identities=33% Similarity=0.576 Sum_probs=31.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 689999999999999999999999999999875
No 431
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.15 E-value=0.083 Score=46.26 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
+++|.|||+|..|...|..|+ .|++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 479999999999999999999 999999999865
No 432
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.14 E-value=0.092 Score=47.60 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=32.5
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecCCCC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYA 43 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~~g 43 (388)
++|+|||||..|..++..+.+.|++|+++|+++...
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~ 37 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQAL 37 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 489999999999999999999999999999877543
No 433
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.14 E-value=0.081 Score=46.70 Aligned_cols=32 Identities=31% Similarity=0.496 Sum_probs=29.8
Q ss_pred eEEEECCChHHHHHHHHHhhcCC--CEEEEeecC
Q 016519 9 EVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~ 40 (388)
+|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999998 999999854
No 434
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.14 E-value=0.099 Score=46.18 Aligned_cols=41 Identities=20% Similarity=0.238 Sum_probs=32.5
Q ss_pred CcccCCCCeEEEECC-ChHHHHHHHHHhhcCCCEEEEeecCC
Q 016519 1 MKEQAAGVEVIIVGA-GPSGLATAACLSLQSIPYVILERENC 41 (388)
Q Consensus 1 m~~~~~~~dv~IIGa-G~aGl~~A~~l~~~g~~v~lie~~~~ 41 (388)
|+......+|+|.|| |..|..++..|.+.|++|+++++...
T Consensus 1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 443344579999999 99999999999999999999998764
No 435
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.09 E-value=0.11 Score=43.32 Aligned_cols=34 Identities=24% Similarity=0.196 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 436
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.06 E-value=0.092 Score=48.06 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||+|..|+.++..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4699999999999999999999999999999865
No 437
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.04 E-value=0.039 Score=50.09 Aligned_cols=32 Identities=13% Similarity=0.250 Sum_probs=30.5
Q ss_pred eEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 69999999999999999999999999999876
No 438
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.03 E-value=0.073 Score=50.02 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-CC-CEEEEeecCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ-SI-PYVILERENC 41 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~-g~-~v~lie~~~~ 41 (388)
..+|.|||+|..|+..|..|++. |+ +|+++|++..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999999874
No 439
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.00 E-value=0.086 Score=46.06 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
++|.|||.|..|...|..|.+.|++|+++|+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999999999999999875
No 440
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.94 E-value=0.049 Score=49.71 Aligned_cols=33 Identities=39% Similarity=0.499 Sum_probs=30.9
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 369999999999999999999999999999876
No 441
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=92.94 E-value=0.059 Score=49.78 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.8
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCe-eEEEEecch
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAK-TSLVIRSPM 220 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~-v~~~~r~~~ 220 (388)
.+|+|||+|.+|+-+|..|++.|.+ |+++.+.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4799999999999999999999999 999999873
No 442
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.92 E-value=0.054 Score=51.43 Aligned_cols=34 Identities=29% Similarity=0.459 Sum_probs=31.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 5789999999999999999999999999998875
No 443
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.91 E-value=0.084 Score=46.38 Aligned_cols=35 Identities=11% Similarity=0.072 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecCC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~~ 41 (388)
..+|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999998764
No 444
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.88 E-value=0.086 Score=41.15 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=31.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5679999999999999999999999999999874
No 445
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.87 E-value=0.065 Score=48.51 Aligned_cols=34 Identities=35% Similarity=0.461 Sum_probs=31.3
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3479999999999999999999999999999865
No 446
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.81 E-value=0.12 Score=45.83 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeec
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERE 39 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~ 39 (388)
..+|+|||+|..|.++|..|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3689999999999999999999999 99999986
No 447
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.80 E-value=0.11 Score=47.89 Aligned_cols=34 Identities=32% Similarity=0.498 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
...|+|||.|..|..+|..|.+.|++|++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999875
No 448
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.75 E-value=0.097 Score=46.58 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|.|||.|..|...|..|++.|++|+++|+.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999999865
No 449
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.73 E-value=0.058 Score=45.56 Aligned_cols=33 Identities=30% Similarity=0.362 Sum_probs=30.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
...++|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4689999999999999999999999 99999865
No 450
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.60 E-value=0.12 Score=44.96 Aligned_cols=34 Identities=15% Similarity=0.120 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.++|+|.|||..|..++..|.+.|++|+++.|.+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999999875
No 451
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.58 E-value=0.11 Score=46.52 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|.|||+|..|.+.|..|.+.|++|+++++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4699999999999999999999999999999854
No 452
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.58 E-value=0.095 Score=45.15 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCC-EEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~-v~lie~~~ 40 (388)
..+|.|||+|..|...|..|.+.|++ |.++|++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 46899999999999999999999998 89999864
No 453
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.57 E-value=0.079 Score=47.69 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=30.3
Q ss_pred eEEEECCCCCHHHHHHHHHhhc------CeeEEEEecc
Q 016519 188 NVLVVGSGNSGMEIALDLANHA------AKTSLVIRSP 219 (388)
Q Consensus 188 ~v~VvG~G~~a~e~a~~l~~~~------~~v~~~~r~~ 219 (388)
+|+|||+|.+|+-+|..|++.| .+|+++.+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999886
No 454
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.56 E-value=0.13 Score=47.79 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||.|..|+.+|..++++|++|+.+|-+.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999765
No 455
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.51 E-value=0.11 Score=47.03 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|+|+|+|.+|..++..|...|.+|+++|+.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 456
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.49 E-value=0.089 Score=49.08 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=30.2
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 9 EVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
+|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 457
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=92.48 E-value=0.057 Score=50.90 Aligned_cols=33 Identities=33% Similarity=0.511 Sum_probs=31.0
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcC--eeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAA--KTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~--~v~~~~r~~ 219 (388)
++|+|||+|.+|+-+|..|++.|. +|+++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 579999999999999999999999 999999876
No 458
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.40 E-value=0.068 Score=49.49 Aligned_cols=34 Identities=15% Similarity=0.426 Sum_probs=31.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhc-CeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~-~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++.| .+|+++.+++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 567999999999999999999999 8999999876
No 459
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.33 E-value=0.13 Score=48.23 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 460
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.31 E-value=0.1 Score=46.16 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=29.7
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|..|.-+|..|+ .|.+|+++.|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 899999999887
No 461
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.28 E-value=0.12 Score=45.59 Aligned_cols=32 Identities=28% Similarity=0.415 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
++|+|||+|..|.+.|..|. .|.+|+++++..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 68999999999999999999 999999999865
No 462
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.28 E-value=0.076 Score=48.35 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=32.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhhcCeeEEEEec
Q 016519 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (388)
Q Consensus 185 ~~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~ 218 (388)
...+|+|||+|.+|+-+|..|.+.|.+|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 3678999999999999999999999999999988
No 463
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=92.28 E-value=0.053 Score=50.89 Aligned_cols=33 Identities=30% Similarity=0.562 Sum_probs=31.0
Q ss_pred CeEEEECCCCCHHHHHHHHHhhc------CeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHA------AKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~------~~v~~~~r~~ 219 (388)
++|+|||+|.+|+-+|..|++.| .+|+++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~ 44 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASP 44 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCC
Confidence 57999999999999999999999 8999999875
No 464
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.26 E-value=0.13 Score=45.56 Aligned_cols=32 Identities=28% Similarity=0.437 Sum_probs=29.2
Q ss_pred eEEEECCChHHHHHHHHHhhc--CCCEEEEeecC
Q 016519 9 EVIIVGAGPSGLATAACLSLQ--SIPYVILEREN 40 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~ 40 (388)
+|+|||+|..|.++|..|++. +.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 799999999999999999985 78999999865
No 465
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.22 E-value=0.15 Score=42.21 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=29.9
Q ss_pred eEEEEC-CChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 9 EVIIVG-AGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 9 dv~IIG-aG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
+|+||| +|..|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999999864
No 466
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.21 E-value=0.079 Score=49.33 Aligned_cols=35 Identities=29% Similarity=0.493 Sum_probs=31.9
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcC-eeEEEEecch
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSPM 220 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~-~v~~~~r~~~ 220 (388)
..+|+|||+|.+|+-+|..|++.|. +|+++.+.+.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 3479999999999999999999999 9999999873
No 467
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.18 E-value=0.089 Score=46.57 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=30.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-----C-CCEEEEee
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQ-----S-IPYVILER 38 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~-----g-~~v~lie~ 38 (388)
+.+|.|||+|..|...|..|.+. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 36899999999999999999999 9 99999998
No 468
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.16 E-value=0.14 Score=45.65 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC--CEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~ 40 (388)
..+|+|||+|..|.++|..|+..++ +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999987 899999753
No 469
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.15 E-value=0.1 Score=45.63 Aligned_cols=33 Identities=21% Similarity=0.186 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||.|..|...|..|.+.|++|+++|+++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 379999999999999999999999999999875
No 470
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.10 E-value=0.16 Score=46.24 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|+|+|..|..+|..|...|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3689999999999999999999999999999864
No 471
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.08 E-value=0.13 Score=46.44 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999854
No 472
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.06 E-value=0.085 Score=49.90 Aligned_cols=34 Identities=24% Similarity=0.440 Sum_probs=31.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
..+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 5689999999999999999999999999998775
No 473
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.03 E-value=0.13 Score=46.09 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=30.5
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|.|||+|..|.-+|..|++.|.+|+++.|.+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~ 36 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARGA 36 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH
Confidence 579999999999999999999999999999854
No 474
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.02 E-value=0.15 Score=45.40 Aligned_cols=34 Identities=18% Similarity=0.353 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
..+|+|||+|-.|..+|..|++.|+ +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4699999999999999999999998 899999865
No 475
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.01 E-value=0.15 Score=45.04 Aligned_cols=33 Identities=30% Similarity=0.439 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
.+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 899999754
No 476
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.98 E-value=0.14 Score=45.14 Aligned_cols=34 Identities=26% Similarity=0.468 Sum_probs=30.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC--CEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~ 40 (388)
..+|+|||||..|.++|..|+..++ +++|+|.+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3689999999999999999999998 999999865
No 477
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.98 E-value=0.15 Score=45.37 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=29.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||+|..|.+.|..|++.|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 643
No 478
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.94 E-value=0.13 Score=46.03 Aligned_cols=30 Identities=30% Similarity=0.212 Sum_probs=29.0
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCEEEEee
Q 016519 9 EVIIVGAGPSGLATAACLSLQSIPYVILER 38 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~g~~v~lie~ 38 (388)
+|.|||+|..|...|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 479
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.92 E-value=0.17 Score=46.16 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+|+|||+|..|..+|..+...|.+|+++|+..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 480
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.91 E-value=0.17 Score=44.99 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC-CEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~-~v~lie~~~ 40 (388)
.+|+|||+|..|.++|..|+..++ +++++|...
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 589999999999999999999998 999999865
No 481
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.86 E-value=0.13 Score=45.68 Aligned_cols=32 Identities=28% Similarity=0.481 Sum_probs=29.7
Q ss_pred eEEEECCChHHHHHHHHHhhcCC--CEEEEeecC
Q 016519 9 EVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~g~--~v~lie~~~ 40 (388)
+|+|||+|..|.+.|..|++.|+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 79999999999999999999998 999999864
No 482
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.84 E-value=0.12 Score=39.20 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=30.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
+.+++|+|+|..|..++..|.+.|.+|+++.|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999876
No 483
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.77 E-value=0.12 Score=39.65 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=32.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.++++|+|.|..|..+|..|.+.|.+|+++.+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4679999999999999999999999999999988
No 484
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.73 E-value=0.2 Score=44.40 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||+|..|...|..|.+.|++|+++|++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999865
No 485
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.71 E-value=0.15 Score=45.29 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC-CCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g-~~v~lie~~~ 40 (388)
..+|.|||.|..|...|..|++.| ++|+++|+.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 368999999999999999999999 9999999875
No 486
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.70 E-value=0.13 Score=47.31 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=29.1
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 9 EVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 9 dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
+|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 487
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=91.68 E-value=0.09 Score=48.47 Aligned_cols=33 Identities=24% Similarity=0.331 Sum_probs=30.9
Q ss_pred CeEEEECCCCCHHHHHHHHHhh--cCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~--~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++. |.+|+++.+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4799999999999999999999 99999999875
No 488
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.68 E-value=0.079 Score=49.71 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=31.4
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 469999999999999999999999999999987
No 489
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.63 E-value=0.2 Score=41.47 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=29.8
Q ss_pred eEEEECC-ChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 9 EVIIVGA-GPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 9 dv~IIGa-G~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
+|+|+|| |..|..++..|.++|++|++++|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999999865
No 490
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=91.63 E-value=0.11 Score=47.57 Aligned_cols=33 Identities=30% Similarity=0.504 Sum_probs=30.8
Q ss_pred CeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 187 ~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 479999999999999999999999999999876
No 491
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=91.61 E-value=0.097 Score=38.42 Aligned_cols=34 Identities=26% Similarity=0.267 Sum_probs=31.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhc-CeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~-~~v~~~~r~~ 219 (388)
.++++|+|+|.+|..++..|...| .+|+++.|++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8899999887
No 492
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.60 E-value=0.23 Score=43.12 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
++|+|.|+|..|..++..|.+.|++|+++++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 589999999999999999999999999999875
No 493
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.58 E-value=0.14 Score=48.39 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~--g~~v~lie~~~ 40 (388)
.+|.|||+|..|+..|..|++. |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 78999999864
No 494
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=91.58 E-value=0.11 Score=48.57 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=30.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhc-CeeEEEEe
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVIR 217 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~-~~v~~~~r 217 (388)
..+|+|||+|.+|+-+|..|++.| .+|+++.+
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 347999999999999999999999 99999999
No 495
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.56 E-value=0.2 Score=43.17 Aligned_cols=34 Identities=32% Similarity=0.385 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
..+++|||+|-+|-+++..|.+.|.+|+++.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999998865
No 496
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.55 E-value=0.12 Score=39.57 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=31.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhhcCeeEEEEecc
Q 016519 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (388)
Q Consensus 186 ~~~v~VvG~G~~a~e~a~~l~~~~~~v~~~~r~~ 219 (388)
.++++|+|+|..|..+|..|.+.|.+|+++.+.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4679999999999999999999999999999887
No 497
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.54 E-value=0.19 Score=43.48 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
...++|+|+|-.|.++|..|++.|.+|++++|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998754
No 498
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.54 E-value=0.16 Score=47.66 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 7 ~~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
...|+|||+|..|...+..|.+.|.+|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4689999999999999999999999999999864
No 499
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.51 E-value=0.17 Score=47.73 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 589999999999999999999999999999865
No 500
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.51 E-value=0.14 Score=44.98 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCEEEEeecC
Q 016519 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (388)
Q Consensus 8 ~dv~IIGaG~aGl~~A~~l~~~g~~v~lie~~~ 40 (388)
.+|.|||+|..|...|..|.+.|++|+++|+++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 589999999999999999999999999999865
Done!