Query 016521
Match_columns 388
No_of_seqs 228 out of 1889
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 07:35:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016521.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016521hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1441 Glucose-6-phosphate/ph 100.0 6.7E-41 1.5E-45 309.1 17.9 299 54-353 9-314 (316)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 9.6E-37 2.1E-41 287.8 27.7 285 64-350 4-297 (302)
3 PTZ00343 triose or hexose phos 100.0 1.6E-35 3.5E-40 283.7 32.2 285 61-347 48-349 (350)
4 PLN00411 nodulin MtN21 family 100.0 4E-29 8.6E-34 238.8 29.4 287 61-351 12-333 (358)
5 KOG1443 Predicted integral mem 100.0 1.2E-29 2.6E-34 225.7 22.2 280 63-344 17-313 (349)
6 KOG1444 Nucleotide-sugar trans 100.0 2.9E-29 6.3E-34 226.6 23.8 293 61-353 11-307 (314)
7 PF08449 UAA: UAA transporter 100.0 4.2E-27 9.1E-32 221.9 28.1 272 77-351 15-302 (303)
8 KOG1442 GDP-fucose transporter 100.0 5.7E-30 1.2E-34 224.1 5.3 296 63-358 29-339 (347)
9 PRK11689 aromatic amino acid e 99.9 3.1E-25 6.8E-30 208.4 29.6 263 68-346 10-287 (295)
10 PF06027 DUF914: Eukaryotic pr 99.9 2.6E-25 5.7E-30 208.3 27.5 269 78-349 29-308 (334)
11 PRK11272 putative DMT superfam 99.9 1.1E-24 2.3E-29 204.6 30.8 273 64-347 10-286 (292)
12 PRK15430 putative chlorampheni 99.9 1.2E-24 2.6E-29 204.6 28.0 273 66-349 12-288 (296)
13 PRK11453 O-acetylserine/cystei 99.9 7.5E-24 1.6E-28 199.5 30.7 267 71-348 13-289 (299)
14 TIGR00950 2A78 Carboxylate/Ami 99.9 3.5E-24 7.5E-29 197.8 26.9 254 77-341 4-259 (260)
15 PRK10532 threonine and homoser 99.9 4.4E-23 9.5E-28 193.7 30.7 264 66-348 16-283 (293)
16 COG5070 VRG4 Nucleotide-sugar 99.9 1.2E-24 2.7E-29 185.2 16.5 285 65-353 9-303 (309)
17 KOG1581 UDP-galactose transpor 99.9 1.6E-20 3.5E-25 167.9 26.6 256 90-350 48-317 (327)
18 TIGR03340 phn_DUF6 phosphonate 99.9 1.8E-20 3.8E-25 175.1 24.4 261 76-343 15-280 (281)
19 COG0697 RhaT Permeases of the 99.9 2.9E-18 6.2E-23 160.3 31.6 265 73-347 18-288 (292)
20 TIGR00688 rarD rarD protein. T 99.8 6.7E-19 1.4E-23 162.2 25.6 242 66-321 6-255 (256)
21 KOG1580 UDP-galactose transpor 99.8 1.3E-19 2.9E-24 155.8 14.3 254 90-345 50-312 (337)
22 KOG2765 Predicted membrane pro 99.8 3E-18 6.4E-23 157.3 18.1 220 130-349 162-393 (416)
23 COG2962 RarD Predicted permeas 99.8 2.6E-16 5.6E-21 141.0 25.6 275 64-351 10-288 (293)
24 KOG2234 Predicted UDP-galactos 99.8 5E-16 1.1E-20 143.0 27.2 278 69-350 22-326 (345)
25 KOG1582 UDP-galactose transpor 99.8 1.6E-17 3.4E-22 146.0 15.5 286 59-348 40-334 (367)
26 TIGR00776 RhaT RhaT L-rhamnose 99.8 8.9E-16 1.9E-20 143.7 27.2 256 72-345 11-287 (290)
27 PF03151 TPT: Triose-phosphate 99.7 4.1E-17 8.8E-22 138.3 13.4 139 208-346 1-153 (153)
28 KOG1583 UDP-N-acetylglucosamin 99.7 4E-17 8.7E-22 143.9 13.3 277 67-349 8-317 (330)
29 KOG3912 Predicted integral mem 99.7 3.9E-16 8.5E-21 137.9 18.7 278 71-348 12-336 (372)
30 KOG4510 Permease of the drug/m 99.7 6.7E-18 1.5E-22 148.1 5.8 264 71-346 47-325 (346)
31 COG5006 rhtA Threonine/homoser 99.7 8.1E-15 1.8E-19 128.1 23.7 249 80-346 30-282 (292)
32 PF04142 Nuc_sug_transp: Nucle 99.7 1.4E-15 3.1E-20 138.0 19.8 208 125-336 15-243 (244)
33 KOG2766 Predicted membrane pro 99.6 1.8E-15 3.9E-20 132.1 6.5 264 72-346 28-299 (336)
34 TIGR00803 nst UDP-galactose tr 99.3 9.2E-12 2E-16 112.2 9.3 189 152-344 3-222 (222)
35 PF00892 EamA: EamA-like trans 99.1 2.1E-10 4.6E-15 93.1 8.0 119 75-197 4-124 (126)
36 COG2510 Predicted membrane pro 99.1 1.9E-09 4.2E-14 84.9 11.5 125 72-199 13-139 (140)
37 PF00892 EamA: EamA-like trans 99.0 1.5E-09 3.4E-14 87.9 9.9 124 217-345 1-125 (126)
38 COG2510 Predicted membrane pro 99.0 3.6E-09 7.8E-14 83.4 10.2 133 209-344 5-137 (140)
39 PF06800 Sugar_transport: Suga 99.0 4.6E-08 1E-12 88.9 17.9 208 125-342 43-267 (269)
40 KOG4314 Predicted carbohydrate 98.9 6.2E-09 1.4E-13 88.1 8.9 210 130-345 56-275 (290)
41 PF13536 EmrE: Multidrug resis 98.9 4.8E-09 1E-13 84.0 7.2 105 98-203 2-110 (113)
42 PRK15430 putative chlorampheni 98.8 1.5E-07 3.2E-12 88.6 14.7 139 204-345 5-144 (296)
43 TIGR00950 2A78 Carboxylate/Ami 98.7 6.3E-07 1.4E-11 82.5 15.5 124 69-194 135-259 (260)
44 TIGR00688 rarD rarD protein. T 98.7 5.6E-07 1.2E-11 82.8 14.5 136 207-345 2-141 (256)
45 TIGR03340 phn_DUF6 phosphonate 98.6 1.2E-06 2.5E-11 81.9 14.3 133 209-346 3-135 (281)
46 PLN00411 nodulin MtN21 family 98.4 5.7E-06 1.2E-10 79.6 14.4 137 208-346 14-156 (358)
47 PRK15051 4-amino-4-deoxy-L-ara 98.2 1.4E-05 3E-10 63.5 10.4 64 135-198 45-108 (111)
48 COG2962 RarD Predicted permeas 98.2 2.7E-05 5.9E-10 70.6 12.8 140 205-348 5-146 (293)
49 PTZ00343 triose or hexose phos 98.2 6.4E-05 1.4E-09 72.4 16.2 138 205-345 47-185 (350)
50 PF03151 TPT: Triose-phosphate 98.2 5.8E-05 1.3E-09 63.5 13.7 126 72-198 10-152 (153)
51 PRK11689 aromatic amino acid e 98.1 4.7E-05 1E-09 71.6 13.3 69 130-198 218-286 (295)
52 PF05653 Mg_trans_NIPA: Magnes 98.1 3.3E-05 7.2E-10 72.4 11.7 64 136-199 59-122 (300)
53 TIGR00817 tpt Tpt phosphate/ph 98.1 0.00012 2.6E-09 69.1 15.5 130 211-344 6-135 (302)
54 PRK10532 threonine and homoser 98.1 7E-05 1.5E-09 70.4 13.8 122 72-198 158-280 (293)
55 PF13536 EmrE: Multidrug resis 98.0 4E-05 8.6E-10 61.2 9.6 74 274-348 34-108 (113)
56 PRK11272 putative DMT superfam 98.0 8.8E-05 1.9E-09 69.6 13.4 107 93-199 177-285 (292)
57 PRK02971 4-amino-4-deoxy-L-ara 97.9 0.00036 7.8E-09 56.9 13.3 118 207-346 2-122 (129)
58 PRK11453 O-acetylserine/cystei 97.9 0.00028 6.2E-09 66.4 13.7 70 130-199 217-287 (299)
59 PRK13499 rhamnose-proton sympo 97.9 0.0053 1.1E-07 58.4 21.8 218 128-347 74-342 (345)
60 TIGR00776 RhaT RhaT L-rhamnose 97.7 0.00033 7.2E-09 65.7 11.4 130 208-346 2-136 (290)
61 PF08449 UAA: UAA transporter 97.6 0.0014 3E-08 61.9 13.6 127 218-349 11-139 (303)
62 PRK02971 4-amino-4-deoxy-L-ara 97.5 0.00026 5.7E-09 57.7 6.6 67 134-200 55-123 (129)
63 PRK15051 4-amino-4-deoxy-L-ara 97.5 0.00065 1.4E-08 53.9 8.4 54 291-344 54-107 (111)
64 COG0697 RhaT Permeases of the 97.5 0.0047 1E-07 57.2 15.7 138 206-347 6-144 (292)
65 PF06027 DUF914: Eukaryotic pr 97.4 0.0036 7.8E-08 59.4 13.9 76 273-348 78-153 (334)
66 KOG2922 Uncharacterized conser 97.4 0.0034 7.5E-08 57.9 12.2 65 135-199 72-136 (335)
67 PRK10452 multidrug efflux syst 97.3 0.0007 1.5E-08 54.2 6.8 69 132-200 35-104 (120)
68 PF04657 DUF606: Protein of un 97.3 0.0095 2.1E-07 49.2 12.9 130 209-342 3-137 (138)
69 PRK09541 emrE multidrug efflux 97.2 0.0011 2.5E-08 52.3 6.6 67 133-199 36-103 (110)
70 COG4975 GlcU Putative glucose 97.1 0.00018 3.9E-09 63.6 0.7 212 124-345 56-284 (288)
71 PRK10650 multidrug efflux syst 97.0 0.0023 5.1E-08 50.3 6.8 65 133-197 41-106 (109)
72 COG2076 EmrE Membrane transpor 97.0 0.0022 4.7E-08 49.8 6.4 66 133-198 36-102 (106)
73 PRK11431 multidrug efflux syst 97.0 0.0028 6.1E-08 49.5 7.1 65 134-198 36-101 (105)
74 PF04142 Nuc_sug_transp: Nucle 96.9 0.0034 7.3E-08 57.2 7.8 76 273-348 16-91 (244)
75 PRK10452 multidrug efflux syst 96.7 0.014 3E-07 46.8 8.8 54 293-346 49-103 (120)
76 COG5006 rhtA Threonine/homoser 96.6 0.029 6.2E-07 50.2 10.9 121 70-195 156-278 (292)
77 PRK09541 emrE multidrug efflux 96.6 0.015 3.3E-07 45.9 8.3 54 293-346 49-103 (110)
78 PF06800 Sugar_transport: Suga 96.6 0.053 1.1E-06 49.7 12.9 68 128-195 196-267 (269)
79 PRK10650 multidrug efflux syst 96.6 0.046 9.9E-07 43.0 10.7 52 293-344 54-106 (109)
80 PRK13499 rhamnose-proton sympo 96.5 0.027 5.8E-07 53.7 10.8 137 205-348 5-155 (345)
81 PF00893 Multi_Drug_Res: Small 96.4 0.011 2.3E-07 45.3 6.4 56 135-190 37-93 (93)
82 PF04657 DUF606: Protein of un 96.4 0.13 2.8E-06 42.5 12.9 117 78-196 17-138 (138)
83 COG3238 Uncharacterized protei 96.4 0.13 2.7E-06 42.8 12.6 136 206-344 4-144 (150)
84 PF07857 DUF1632: CEO family ( 96.3 0.015 3.2E-07 53.0 7.3 132 208-351 1-139 (254)
85 PF05653 Mg_trans_NIPA: Magnes 96.2 0.025 5.4E-07 53.2 8.7 118 205-346 5-122 (300)
86 PRK11431 multidrug efflux syst 96.1 0.041 8.9E-07 43.0 8.3 52 294-345 49-101 (105)
87 COG2076 EmrE Membrane transpor 96.1 0.039 8.5E-07 42.8 7.8 53 294-346 50-103 (106)
88 TIGR00803 nst UDP-galactose tr 95.9 0.23 4.9E-06 44.5 13.5 67 130-196 155-221 (222)
89 PF10639 UPF0546: Uncharacteri 95.0 0.077 1.7E-06 41.9 6.0 67 130-197 45-112 (113)
90 COG5070 VRG4 Nucleotide-sugar 94.8 0.19 4E-06 44.3 8.4 127 65-192 158-289 (309)
91 KOG2234 Predicted UDP-galactos 94.6 1.1 2.5E-05 42.3 13.8 71 275-345 93-163 (345)
92 PF00893 Multi_Drug_Res: Small 94.1 0.17 3.7E-06 38.6 6.0 46 292-337 47-93 (93)
93 KOG4510 Permease of the drug/m 93.9 0.033 7.1E-07 50.3 1.9 68 278-345 101-168 (346)
94 COG4975 GlcU Putative glucose 93.3 0.052 1.1E-06 48.5 2.1 129 208-346 3-136 (288)
95 KOG1441 Glucose-6-phosphate/ph 93.3 0.13 2.7E-06 48.5 4.7 123 75-198 176-306 (316)
96 KOG2765 Predicted membrane pro 92.9 0.97 2.1E-05 43.0 9.9 123 80-203 265-394 (416)
97 KOG1444 Nucleotide-sugar trans 91.0 8.3 0.00018 36.1 13.6 134 209-346 14-149 (314)
98 PF10639 UPF0546: Uncharacteri 90.8 0.32 7E-06 38.4 3.7 54 290-343 57-111 (113)
99 PF06379 RhaT: L-rhamnose-prot 90.7 4.4 9.4E-05 38.4 11.6 140 206-349 6-156 (344)
100 KOG1581 UDP-galactose transpor 90.3 4.2 9.1E-05 37.8 10.9 131 63-195 173-309 (327)
101 COG3238 Uncharacterized protei 88.8 11 0.00024 31.3 11.4 105 93-197 34-144 (150)
102 KOG1580 UDP-galactose transpor 86.6 2.7 5.8E-05 37.5 6.8 58 290-347 101-158 (337)
103 KOG1583 UDP-N-acetylglucosamin 84.3 2.3 5E-05 38.9 5.5 138 58-197 160-312 (330)
104 KOG4314 Predicted carbohydrate 82.6 0.53 1.1E-05 40.7 0.7 63 285-347 64-126 (290)
105 KOG3912 Predicted integral mem 80.9 16 0.00034 33.8 9.3 57 290-346 102-158 (372)
106 PF05297 Herpes_LMP1: Herpesvi 78.9 0.63 1.4E-05 42.4 0.0 75 171-247 68-146 (381)
107 KOG2922 Uncharacterized conser 77.5 0.48 1E-05 44.1 -1.2 120 204-347 18-137 (335)
108 PF04342 DUF486: Protein of un 73.8 37 0.0008 26.4 8.3 31 167-197 76-106 (108)
109 KOG1442 GDP-fucose transporter 73.8 2.2 4.7E-05 39.0 1.9 53 292-344 120-172 (347)
110 PRK06638 NADH:ubiquinone oxido 68.0 69 0.0015 28.1 10.2 24 315-338 133-156 (198)
111 PF08507 COPI_assoc: COPI asso 67.7 66 0.0014 26.2 10.5 31 312-343 72-102 (136)
112 PF06570 DUF1129: Protein of u 66.8 90 0.002 27.4 14.4 16 166-181 188-203 (206)
113 PF04342 DUF486: Protein of un 63.7 34 0.00074 26.6 6.3 28 315-342 77-104 (108)
114 PF00909 Ammonium_transp: Ammo 57.5 2E+02 0.0043 28.2 14.6 22 282-303 359-380 (399)
115 PRK02237 hypothetical protein; 56.9 21 0.00044 27.9 4.1 43 304-346 63-105 (109)
116 COG3169 Uncharacterized protei 56.7 88 0.0019 24.0 8.5 31 167-197 83-113 (116)
117 KOG1582 UDP-galactose transpor 56.5 71 0.0015 29.5 8.1 52 153-204 286-337 (367)
118 PF06123 CreD: Inner membrane 55.9 2.2E+02 0.0048 28.3 12.8 50 206-261 299-348 (430)
119 COG3169 Uncharacterized protei 55.8 81 0.0018 24.1 7.0 29 315-343 84-112 (116)
120 PF02694 UPF0060: Uncharacteri 53.4 20 0.00043 27.9 3.5 43 304-346 61-103 (107)
121 PF07168 Ureide_permease: Urei 50.5 16 0.00035 34.1 3.1 64 277-345 75-145 (336)
122 COG4657 RnfA Predicted NADH:ub 49.7 1.6E+02 0.0035 24.9 8.5 64 169-232 87-157 (193)
123 PRK02237 hypothetical protein; 46.9 33 0.00072 26.7 3.9 35 166-200 72-106 (109)
124 PF02694 UPF0060: Uncharacteri 46.4 36 0.00079 26.5 4.0 35 166-200 70-104 (107)
125 PRK13108 prolipoprotein diacyl 45.4 1.9E+02 0.0041 29.1 9.9 24 326-349 254-277 (460)
126 PF05977 MFS_3: Transmembrane 44.0 3.7E+02 0.008 27.5 15.3 48 296-343 342-390 (524)
127 PF03616 Glt_symporter: Sodium 43.8 3.1E+02 0.0068 26.6 13.1 32 80-114 236-267 (368)
128 PRK11715 inner membrane protei 43.1 3.5E+02 0.0076 27.0 13.0 66 190-261 284-354 (436)
129 COG1742 Uncharacterized conser 41.3 53 0.0011 25.4 4.1 37 165-201 70-106 (109)
130 KOG4831 Unnamed protein [Funct 38.0 49 0.0011 25.7 3.5 55 290-344 68-123 (125)
131 KOG2766 Predicted membrane pro 37.4 8 0.00017 35.1 -0.9 61 286-346 90-150 (336)
132 PRK10666 ammonium transporter; 34.7 4.7E+02 0.01 26.0 18.2 24 281-304 385-408 (428)
133 PRK02935 hypothetical protein; 33.1 1.8E+02 0.0039 22.6 5.9 24 327-350 41-64 (110)
134 COG4025 Predicted membrane pro 30.9 4E+02 0.0087 24.0 9.1 19 19-37 40-58 (284)
135 PF05884 ZYG-11_interact: Inte 30.5 4.6E+02 0.0099 24.6 14.9 32 157-188 193-224 (299)
136 TIGR02865 spore_II_E stage II 30.0 7.3E+02 0.016 26.8 13.4 173 153-343 10-192 (764)
137 PF14851 FAM176: FAM176 family 28.2 87 0.0019 26.2 3.8 11 333-343 33-43 (153)
138 KOG1479 Nucleoside transporter 27.2 6.2E+02 0.013 25.0 14.4 43 304-346 158-202 (406)
139 TIGR00939 2a57 Equilibrative N 26.9 5.7E+02 0.012 25.4 10.1 17 330-346 178-194 (437)
140 PF05961 Chordopox_A13L: Chord 26.3 96 0.0021 21.9 3.1 21 329-349 5-25 (68)
141 PF13937 DUF4212: Domain of un 26.1 2.7E+02 0.0059 20.5 6.5 49 63-111 14-65 (81)
142 PRK15432 autoinducer 2 ABC tra 24.3 2E+02 0.0044 27.6 6.2 23 327-349 287-309 (344)
143 PF06432 GPI2: Phosphatidylino 23.8 5.9E+02 0.013 23.6 20.8 143 89-233 66-220 (282)
144 COG3086 RseC Positive regulato 23.5 1.1E+02 0.0024 25.2 3.6 24 298-321 72-95 (150)
145 TIGR01943 rnfA electron transp 23.5 5E+02 0.011 22.6 7.8 21 168-188 85-105 (190)
146 PF12794 MscS_TM: Mechanosensi 23.5 5.4E+02 0.012 24.6 8.9 11 165-175 62-72 (340)
147 PF07444 Ycf66_N: Ycf66 protei 23.4 72 0.0016 23.8 2.2 24 325-348 4-27 (84)
148 PF10225 DUF2215: Uncharacteri 23.2 2.8E+02 0.0061 25.2 6.6 46 290-335 111-156 (249)
149 PF06379 RhaT: L-rhamnose-prot 23.0 6.8E+02 0.015 24.0 20.2 102 126-227 72-193 (344)
150 PRK05151 electron transport co 22.3 5.1E+02 0.011 22.6 7.6 20 169-188 87-106 (193)
151 COG0786 GltS Na+/glutamate sym 21.5 7.8E+02 0.017 24.2 13.9 82 88-175 244-328 (404)
152 PF06912 DUF1275: Protein of u 20.3 5.7E+02 0.012 22.1 14.9 43 283-325 118-160 (209)
153 PRK14774 lipoprotein signal pe 20.2 1.7E+02 0.0037 25.4 4.3 10 329-338 132-141 (185)
No 1
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-41 Score=309.10 Aligned_cols=299 Identities=31% Similarity=0.494 Sum_probs=266.8
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHH
Q 016521 54 KRQEQRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFT 132 (388)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~ 132 (388)
++++++.+....+..+|++.+++.++.||+++++++||||++++.+|..++.+........+..+..+...+.++. +++
T Consensus 9 ~~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llp 88 (316)
T KOG1441|consen 9 SGQLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLP 88 (316)
T ss_pred ccccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 4455566777888999999999999999999999899999999999999999999998888877766655556665 999
Q ss_pred HHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHH
Q 016521 133 LGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVA 212 (388)
Q Consensus 133 ~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~ 212 (388)
+|++++++.++.|.|+.|+|+|++|++|+++|++++++++++.+|++++..+++++.+..||++.+.+|.++|+.|++.+
T Consensus 89 l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a 168 (316)
T KOG1441|consen 89 LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISA 168 (316)
T ss_pred HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh--hccCCCHHHHHHHHhHHHHHHHH-HHHHhcCCCcc---cccccchhhHHHHHHHHHHHHH
Q 016521 213 LAWIVPSAVNKILWSNLQ--QRESWTALALMWKTTPITLLFLG-SLIPCLDPPGV---LSFNWNFSNTLAILMSAFLGFL 286 (388)
Q Consensus 213 l~a~~~~a~~~i~~~~~~--~~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~ 286 (388)
+++.++.+.+++++|+++ |++++|+.++++|+++++.+.++ |+....|+... ....|+...+..+..+ +++++
T Consensus 169 ~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~ 247 (316)
T KOG1441|consen 169 MISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFL 247 (316)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHH
Confidence 999999999999999998 56789999999999999999988 66555555443 3334555544444444 99999
Q ss_pred HHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccccc
Q 016521 287 LQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSK 353 (388)
Q Consensus 287 ~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~~~ 353 (388)
.|++.|++++++||+++++.+++|.++.++.|+++|++++|+.+..|++++++|+++|++.|.++++
T Consensus 248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999998865433
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=9.6e-37 Score=287.75 Aligned_cols=285 Identities=20% Similarity=0.200 Sum_probs=234.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhh
Q 016521 64 IASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGL 143 (388)
Q Consensus 64 ~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (388)
...+..|++.+++.+++||+++++ +++|++++++|+.++.+++.+....+..++++.++++...+++.|++++.+..+
T Consensus 4 ~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 4 GLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999987 788999999999999887766643333333334455555688899999899999
Q ss_pred hhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHHHHHH
Q 016521 144 ANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNK 223 (388)
Q Consensus 144 ~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 223 (388)
.|+|++|+++++++++++++|+++++++++++|||++++++.+++++++|+++....+.+++..|++++++++++|++|.
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988877777778889999999999999999
Q ss_pred HHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccc-------cchh-hHHHHHHHHH-HHHHHHHHHHHH
Q 016521 224 ILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFN-------WNFS-NTLAILMSAF-LGFLLQWSGALA 294 (388)
Q Consensus 224 i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~-~~~~l~~~~~-~~~~~~~~~~~~ 294 (388)
++.|+..++.+.++.+++.|++..+.+.++++....|++...... +... .+......+. .....+...+.+
T Consensus 162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (302)
T TIGR00817 162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML 241 (302)
T ss_pred HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998765568899999999999998888887665543211110 1111 1222223333 233344566778
Q ss_pred hccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhcc
Q 016521 295 LGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLC 350 (388)
Q Consensus 295 i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~ 350 (388)
++++||+++++.++++|++++++|++++||++|+.+++|+++++.|+++|++.|.+
T Consensus 242 l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~ 297 (302)
T TIGR00817 242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ 297 (302)
T ss_pred HccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999876543
No 3
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.6e-35 Score=283.73 Aligned_cols=285 Identities=19% Similarity=0.230 Sum_probs=236.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCC--cccchhHHHHHHHHHH
Q 016521 61 CGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPP--AKSGLLSLFTLGFVMS 138 (388)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 138 (388)
++....+..|+.+++..++.||++++. +|+|++++.+|++++++++.++...+.+++++. .++....+++.|++..
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 566778889999999999999999998 889999999999999887666554433222211 1223334888998877
Q ss_pred HHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHH
Q 016521 139 FSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVP 218 (388)
Q Consensus 139 ~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~ 218 (388)
......+.|+++++++++++++++.|+++++++++++|||++++++++++++++|+++.+.++.++++.|++++++++++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 66666789999999999999999999999999999999999999999999999999999988888889999999999999
Q ss_pred HHHHHHHHHHhhhcc-----CCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccc------c---ccc-hhhHHHHHHHHHH
Q 016521 219 SAVNKILWSNLQQRE-----SWTALALMWKTTPITLLFLGSLIPCLDPPGVLS------F---NWN-FSNTLAILMSAFL 283 (388)
Q Consensus 219 ~a~~~i~~~~~~~~~-----~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~------~---~~~-~~~~~~l~~~~~~ 283 (388)
+++|+++.|+..++. +.++.++..++.+++.++++|+....|.+.... . .+. ...+..++.+++.
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~ 285 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVW 285 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Confidence 999999999987654 367777777788899988888876666432110 0 111 1123345566777
Q ss_pred HHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521 284 GFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL 347 (388)
Q Consensus 284 ~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~ 347 (388)
.++.+...|.++++++|+++++.+++||++++++|++++||++|+.+++|+++++.|+++|++.
T Consensus 286 ~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 286 YYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 7788888889999999999999999999999999999999999999999999999999999865
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=4e-29 Score=238.80 Aligned_cols=287 Identities=13% Similarity=0.102 Sum_probs=215.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC--CCcccchhHHHHHHHHHH
Q 016521 61 CGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS--PPAKSGLLSLFTLGFVMS 138 (388)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 138 (388)
..+...++...+++.++..+.|..++. |.+ |..++++|+.++.+++.++.+.++++++ +..+++...+...|++..
T Consensus 12 ~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~ 89 (358)
T PLN00411 12 AVFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS 89 (358)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 445667778899999999999999965 899 9999999999999888776544332221 112333334555666555
Q ss_pred HHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHH------hccccchhhHHHHHhhhhheeeeeec-cc---------
Q 016521 139 FSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFIC------YRKRVSVLKVITLTAVSIGVAVATVT-DL--------- 202 (388)
Q Consensus 139 ~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~------l~e~~~~~~~~~l~l~~~Gv~l~~~~-~~--------- 202 (388)
....+.+++++|++++.++++.++.|++++++++++ +|||++++++++++++++|+.++... +.
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~ 169 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP 169 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 566689999999999999999999999999999999 69999999999999999999875531 10
Q ss_pred --------------ccc-HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcc--c
Q 016521 203 --------------QFS-LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGV--L 265 (388)
Q Consensus 203 --------------~~~-~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~--~ 265 (388)
+.+ ..|.++.++++++||+|++++|+..++++ ++.....++..++.+.+.+.....+..+. +
T Consensus 170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~ 248 (358)
T PLN00411 170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW 248 (358)
T ss_pred cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCcccc
Confidence 112 45999999999999999999998876643 23455556665555544444444443211 1
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521 266 SFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
...++.. ...+++.++...+....+++++++.+|.+++++.+++|++++++|++++||++++.+++|+++++.|+++.+
T Consensus 249 ~~~~~~~-~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 249 IIHFDIT-LITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM 327 (358)
T ss_pred eeccchH-HHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 1123333 233555565555555556789999999999999999999999999999999999999999999999998877
Q ss_pred hhhccc
Q 016521 346 YLNLCN 351 (388)
Q Consensus 346 ~~~~~~ 351 (388)
+.+.+|
T Consensus 328 ~~~~~~ 333 (358)
T PLN00411 328 WGKANE 333 (358)
T ss_pred hhhhhh
Confidence 654433
No 5
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.97 E-value=1.2e-29 Score=225.74 Aligned_cols=280 Identities=21% Similarity=0.304 Sum_probs=240.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC----CCcccchhH-HHHHHHHH
Q 016521 63 PIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS----PPAKSGLLS-LFTLGFVM 137 (388)
Q Consensus 63 ~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~ 137 (388)
.++.+..|+++|+++.+++|+.-.+ |+||++++.+|+++-+++.....+....+.+ ..+++...+ +.|++++.
T Consensus 17 ~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat 94 (349)
T KOG1443|consen 17 TLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT 94 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh
Confidence 3445688999999999999998776 7788999999999998887766554433222 233444444 88999999
Q ss_pred HHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHH
Q 016521 138 SFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIV 217 (388)
Q Consensus 138 ~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~ 217 (388)
++++++.|+|++|+++++|+|.|++.++|+.+++.++-=||+++.-.+.+.++.+|+.+.++.+.+++..|+++.+++.+
T Consensus 95 a~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~ 174 (349)
T KOG1443|consen 95 ALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASL 174 (349)
T ss_pred hcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHH
Confidence 99999999999999999999999999999999998766699999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccC---CCHHHHHHHHhHHHHHHHHHHHHhcCCCccccc--cc---ch----hhHHHHHHHHHHHH
Q 016521 218 PSAVNKILWSNLQQRES---WTALALMWKTTPITLLFLGSLIPCLDPPGVLSF--NW---NF----SNTLAILMSAFLGF 285 (388)
Q Consensus 218 ~~a~~~i~~~~~~~~~~---~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~---~~----~~~~~l~~~~~~~~ 285 (388)
+.++...+.+.+.++.+ -+|...++...+...+.+++....+|++..... .+ +. .....+...|+.++
T Consensus 175 ~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF 254 (349)
T KOG1443|consen 175 LSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAF 254 (349)
T ss_pred hhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 99999999888876654 589999999999999999999888888654321 11 11 22356677788899
Q ss_pred HHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521 286 LLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY 344 (388)
Q Consensus 286 ~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly 344 (388)
++..+.|.++.+++..+.++.|..|.+.+.++|..+.+|+++..+++|..+++.|+..|
T Consensus 255 ~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 255 LLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999888
No 6
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.9e-29 Score=226.64 Aligned_cols=293 Identities=22% Similarity=0.280 Sum_probs=260.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHH
Q 016521 61 CGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFS 140 (388)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (388)
.......++|+.+|..+++.||+++++++||--+++...|++.+.+.+.++.+.+..+.++.+++.+++.+|..+.+.++
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~ 90 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM 90 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH
Confidence 34466778999999999999999999988886666777999999999999998888777778888888899999999999
Q ss_pred HhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHHH
Q 016521 141 TGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSA 220 (388)
Q Consensus 141 ~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a 220 (388)
+..+..+++|++++.++++|..+|+++++.+..++|.+++...|.++....+|......+|.+++..|..|.+..+++.+
T Consensus 91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a 170 (314)
T KOG1444|consen 91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTA 170 (314)
T ss_pred HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccc---c-chhhHHHHHHHHHHHHHHHHHHHHHhc
Q 016521 221 VNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFN---W-NFSNTLAILMSAFLGFLLQWSGALALG 296 (388)
Q Consensus 221 ~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~-~~~~~~~l~~~~~~~~~~~~~~~~~i~ 296 (388)
.+.+..|+..+..+.+.+.+++|.++.+.+.+.+...++++.+....+ | ....+..+.++|+++++.+++.+++.+
T Consensus 171 ~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~ 250 (314)
T KOG1444|consen 171 AFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTR 250 (314)
T ss_pred HHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998888888999999999999999988888777664421211 2 235578899999999999999999999
Q ss_pred cCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccccc
Q 016521 297 ATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSK 353 (388)
Q Consensus 297 ~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~~~ 353 (388)
..|+++.+++|..+...+.+.+.+++|++.++..++|..+-+.|..+|++.+.++++
T Consensus 251 ~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~ 307 (314)
T KOG1444|consen 251 VNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKK 307 (314)
T ss_pred hccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence 999999999996666777777777778889999999999999999999998765433
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.96 E-value=4.2e-27 Score=221.89 Aligned_cols=272 Identities=21% Similarity=0.277 Sum_probs=223.7
Q ss_pred HHHHHHHHhh-ccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHHHHHHHHHhhhhhhhhcchhh
Q 016521 77 IIFMNKWVLK-NIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLGFVMSFSTGLANVSLKYNSVG 154 (388)
Q Consensus 77 ~~~~nK~~~~-~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~al~~~s~s 154 (388)
..++.+.+.. .++.++|.++++.|+....+...+.....+ .+..++.+++ .++.++...++..+.|.|++|+|.+
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p 91 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYP 91 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChH
Confidence 3445555555 444447999999999999887776654443 1122334443 7778899999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecccc----c------cHHHHHHHHHHHHHHHHHHH
Q 016521 155 FYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQ----F------SLFGACVALAWIVPSAVNKI 224 (388)
Q Consensus 155 ~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~----~------~~~G~~~~l~a~~~~a~~~i 224 (388)
++++.|++.|+++++++++++|||++++++++++++++|+++....|.+ . ...|+++.+.+.++.+++.+
T Consensus 92 ~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~ 171 (303)
T PF08449_consen 92 TQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGV 171 (303)
T ss_pred HHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998875521 1 12399999999999999999
Q ss_pred HHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHh--cCCC-ccccc-ccchhhHHHHHHHHHHHHHHHHHHHHHhccCch
Q 016521 225 LWSNLQQRESWTALALMWKTTPITLLFLGSLIPC--LDPP-GVLSF-NWNFSNTLAILMSAFLGFLLQWSGALALGATSA 300 (388)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a 300 (388)
++++..++++.+++++++|.+.++.+.+++.... .++. +...+ ...+..+..+...++.+...+.+.+.++++.||
T Consensus 172 ~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~a 251 (303)
T PF08449_consen 172 YQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSA 251 (303)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999888777765 2221 11111 123345667778888888888888899999999
Q ss_pred hhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccc
Q 016521 301 ISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCN 351 (388)
Q Consensus 301 ~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~ 351 (388)
++.+++.+++.++++++++++||+++++.+++|+++++.|..+|++.++++
T Consensus 252 l~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 252 LTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred hhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999999999999877543
No 8
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=5.7e-30 Score=224.05 Aligned_cols=296 Identities=17% Similarity=0.244 Sum_probs=249.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcc--CCChHHHHHHHHHHHHHHHHHHHHHccCC-------CCCCCcccchhHHHHH
Q 016521 63 PIASLTFNFVVAVSIIFMNKWVLKNI--GFQFPIFLSFIHYAVSWALMAVLNAFALL-------PASPPAKSGLLSLFTL 133 (388)
Q Consensus 63 ~~~~~~~~~~~s~~~~~~nK~~~~~~--g~~~p~~l~~~r~~~a~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~ 133 (388)
+......+...++++.+.||++++.. ..+.|.+++++|.++...+...+.+.... +..+.+-+....++++
T Consensus 29 v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlpl 108 (347)
T KOG1442|consen 29 VDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPL 108 (347)
T ss_pred hhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcch
Confidence 34455667788999999999999963 34569999999999988877666443211 1112233344458899
Q ss_pred HHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc---ccccHHHHH
Q 016521 134 GFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD---LQFSLFGAC 210 (388)
Q Consensus 134 ~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G~~ 210 (388)
++.+.+.+.++|++|+|+++++|++-++++.+|+++++++++|+|-+.....++.++++|..+-..+| ...++.|.+
T Consensus 109 svVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gvi 188 (347)
T KOG1442|consen 109 SVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVI 188 (347)
T ss_pred hheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999888877 457799999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCC-cccc--cccchhhHHHHHHHHHHHHHH
Q 016521 211 VALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPP-GVLS--FNWNFSNTLAILMSAFLGFLL 287 (388)
Q Consensus 211 ~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~~~~~l~~~~~~~~~~ 287 (388)
+++.+.++-|+..++.|+......---|.+.+|.+..+.+..+|...+.++. .... ..+....|..+.++|+++|.+
T Consensus 189 fGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~m 268 (347)
T KOG1442|consen 189 FGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAM 268 (347)
T ss_pred HHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999977755444568999999999999988888776442 2333 234567789999999999999
Q ss_pred HHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhcccccccccc
Q 016521 288 QWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSK 358 (388)
Q Consensus 288 ~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~~~~~~~~ 358 (388)
++...+.|+.+||+++.+.++.|.+.+.+++..+++|..+..-|.|-.+++.|...|++.|+++.+++...
T Consensus 269 gyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~ 339 (347)
T KOG1442|consen 269 GYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQ 339 (347)
T ss_pred hheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999988776654433
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.95 E-value=3.1e-25 Score=208.41 Aligned_cols=263 Identities=12% Similarity=0.021 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhh
Q 016521 68 TFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVS 147 (388)
Q Consensus 68 ~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 147 (388)
....+.+.+.....|...++ +| |..++++|+.++.+++.++. + +++ .+++.+......++.+.....+.+.+
T Consensus 10 l~a~~~Wg~~~~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~--~-~~~--~~~~~~~~~~~~~l~~~~~~~~~~~a 81 (295)
T PRK11689 10 LIAILLWSTMVGLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTV--G-FPR--LRQFPKRYLLAGGLLFVSYEICLALS 81 (295)
T ss_pred HHHHHHHHHHHHHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHc--c-ccc--cccccHHHHHHHhHHHHHHHHHHHHH
Confidence 33445556778889998887 78 99999999999988887653 1 111 11222222444455555666777777
Q ss_pred hhc----chhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc-----------cccHHHHHHH
Q 016521 148 LKY----NSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL-----------QFSLFGACVA 212 (388)
Q Consensus 148 l~~----~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~-----------~~~~~G~~~~ 212 (388)
++| .+++.++++.++.|+++++++++++|||++++++.+++++++|++++..++. +.+..|++++
T Consensus 82 ~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~ 161 (295)
T PRK11689 82 LGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLA 161 (295)
T ss_pred HHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHH
Confidence 754 5777888999999999999999999999999999999999999988875432 1235699999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHH
Q 016521 213 LAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGA 292 (388)
Q Consensus 213 l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 292 (388)
++++++||+|.++.|+..++ .++..... ..+...+.+.....+.+ . ..++...|..+.+.++.+...++.++
T Consensus 162 l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~~~~~-~--~~~~~~~~~~l~~~~~~t~~~~~l~~ 233 (295)
T PRK11689 162 FIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFLSPQP-A--MVFSLPAIIKLLLAAAAMGFGYAAWN 233 (295)
T ss_pred HHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHHhcCc-c--ccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998654 34554322 22222222222222221 1 12344556556666665555566778
Q ss_pred HHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 293 LALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 293 ~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
+.+++.+|.+++++.+++|+++++++++++||++++.+++|+++++.|+++...
T Consensus 234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 899999999999999999999999999999999999999999999999977644
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=2.6e-25 Score=208.31 Aligned_cols=269 Identities=18% Similarity=0.214 Sum_probs=213.2
Q ss_pred HHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCC--CCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhH
Q 016521 78 IFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLP--ASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGF 155 (388)
Q Consensus 78 ~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~ 155 (388)
...+..+-++ |++.|.+.+++.++.-.++.......+..+ ..+..++.+++.+..+++-...+.+.+.|++|++++.
T Consensus 29 ~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS 107 (334)
T PF06027_consen 29 GTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTS 107 (334)
T ss_pred HHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhH
Confidence 4444555555 788899999888877666554433333221 1122344555566778898889999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc---------cccHHHHHHHHHHHHHHHHHHHHH
Q 016521 156 YQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL---------QFSLFGACVALAWIVPSAVNKILW 226 (388)
Q Consensus 156 ~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~i~~ 226 (388)
.|++.+++.|++++++++++|+|+++.+++|++++++|++++...|. +....|+++++.+++.||++++++
T Consensus 108 ~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~ 187 (334)
T PF06027_consen 108 VQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLE 187 (334)
T ss_pred HHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988876542 234789999999999999999999
Q ss_pred HHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHh
Q 016521 227 SNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVL 306 (388)
Q Consensus 227 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~ 306 (388)
|+..|+ .+..+.......++.+...+...++|..+....+|+...+..++..+++-+......-..++..+|+..++.
T Consensus 188 E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLs 265 (334)
T PF06027_consen 188 EKLVKK--APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLS 265 (334)
T ss_pred HHhccc--CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehH
Confidence 998876 457888888888888888777777777666666777655554444444444434344457899999999998
Q ss_pred hhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521 307 GQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL 349 (388)
Q Consensus 307 ~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~ 349 (388)
.....+.+++++++++|+++++..++|.++++.|+.+|+....
T Consensus 266 LLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 266 LLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES 308 (334)
T ss_pred HHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence 8888999999999999999999999999999999999986543
No 11
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=1.1e-24 Score=204.57 Aligned_cols=273 Identities=12% Similarity=0.074 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHH-HHHHh
Q 016521 64 IASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVM-SFSTG 142 (388)
Q Consensus 64 ~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 142 (388)
...+....+.+.+.....|...++ .+ |..++++|+.++.+++.++...++.+ .++++.+......|.+. .....
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHH
Confidence 334444556666678889988875 77 99999999999998877665444322 12344444444555543 45566
Q ss_pred hhhhhh-hcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeec-cccccHHHHHHHHHHHHHHH
Q 016521 143 LANVSL-KYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT-DLQFSLFGACVALAWIVPSA 220 (388)
Q Consensus 143 ~~~~al-~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~-~~~~~~~G~~~~l~a~~~~a 220 (388)
+.+++. ++++++.++++.++.|+++++++++ +|||++++++.+++++++|+.++..+ +.+.+..|.+++++++++||
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a 163 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWA 163 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHH
Confidence 778888 9999999999999999999999985 79999999999999999999887543 33455679999999999999
Q ss_pred HHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH-HHHHHHhccCc
Q 016521 221 VNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQ-WSGALALGATS 299 (388)
Q Consensus 221 ~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~i~~~~ 299 (388)
.|.+..|+..++ ++.....++..++...+.++....+.+.. ...+...|..+.+.++++.... ..++.++++.+
T Consensus 164 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~ 238 (292)
T PRK11272 164 FGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVR 238 (292)
T ss_pred HHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999998886533 23445566766666666665544332211 1123455666666676655444 45567899999
Q ss_pred hhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521 300 AISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL 347 (388)
Q Consensus 300 a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~ 347 (388)
+.+++++.+++|+++++++++++||++|+.+++|+++++.|+.+.++.
T Consensus 239 ~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 239 PALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887654
No 12
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.94 E-value=1.2e-24 Score=204.62 Aligned_cols=273 Identities=10% Similarity=0.014 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC-C---CcccchhHHHHHHHHHHHHH
Q 016521 66 SLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS-P---PAKSGLLSLFTLGFVMSFST 141 (388)
Q Consensus 66 ~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 141 (388)
.+....+.+.......|.. .+ ++ |..++++|++++.+++.++...++.... . .+++........++..+.+.
T Consensus 12 ~~l~a~~~wg~~~~~~k~~-~~--~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (296)
T PRK15430 12 LALAAYFIWGIAPAYFKLI-YY--VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNW 87 (296)
T ss_pred HHHHHHHHHHHHHHHHHHh-cC--CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 3333344444445666875 33 77 9999999999998866555433221110 0 01122122334456677788
Q ss_pred hhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHHHH
Q 016521 142 GLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAV 221 (388)
Q Consensus 142 ~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~ 221 (388)
.+.++|++++|++.++++.++.|+++++++++++|||+++++|.+++++++|+.++...+.+. ..++++++++||+
T Consensus 88 ~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~ 163 (296)
T PRK15430 88 LLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAF 163 (296)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998875433222 1468888999999
Q ss_pred HHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchh
Q 016521 222 NKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAI 301 (388)
Q Consensus 222 ~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~ 301 (388)
|.+..|+..++...+......++.+++.+...+ ..+.+.......+...+..++..++.+...+++.+..+++.+|.
T Consensus 164 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~ 240 (296)
T PRK15430 164 YGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA---IADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS 240 (296)
T ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH---HccCCcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 999988865432223344444455554433221 11211110001111223344445555556667778899999999
Q ss_pred hHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521 302 SHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL 349 (388)
Q Consensus 302 ~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~ 349 (388)
+++++.+++|++++++|++++||++++.+++|+++++.|+.+......
T Consensus 241 ~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~ 288 (296)
T PRK15430 241 TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI 288 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988888765443
No 13
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.94 E-value=7.5e-24 Score=199.52 Aligned_cols=267 Identities=13% Similarity=0.144 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHH-HHHHhhhhhhhh
Q 016521 71 FVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVM-SFSTGLANVSLK 149 (388)
Q Consensus 71 ~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~ 149 (388)
.+.+.......|..+++ ++ |..++++|+.++.+.+.++... ++. ++ ......++.. .....+.+.+++
T Consensus 13 ~~~Wg~~~~~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~~---~~~--~~---~~~~~~g~~~~~~~~~~~~~~~~ 81 (299)
T PRK11453 13 VVVWGLNFVVIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFVAR---PKV--PL---NLLLGYGLTISFGQFAFLFCAIN 81 (299)
T ss_pred HHHHhhhHHHHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHhcC---CCC--ch---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445567777988876 78 9999999999987665544311 111 11 1233334432 234456678888
Q ss_pred c-chhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc---ccccHHHHHHHHHHHHHHHHHHHH
Q 016521 150 Y-NSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD---LQFSLFGACVALAWIVPSAVNKIL 225 (388)
Q Consensus 150 ~-~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~ 225 (388)
| .+++.++++.++.|+++.+++++++|||++.+++++++++++|+.++...+ .+.++.|+++++.++++|+.|.++
T Consensus 82 ~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~ 161 (299)
T PRK11453 82 FGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIF 161 (299)
T ss_pred hcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 8 689999999999999999999999999999999999999999998876532 223467999999999999999999
Q ss_pred HHHhhhccC-CCHHHHHHHHhHHHHHHHHHHHHhcCCCccc---ccccchhhHHHHHHHHHHHHHHHHHH-HHHhccCch
Q 016521 226 WSNLQQRES-WTALALMWKTTPITLLFLGSLIPCLDPPGVL---SFNWNFSNTLAILMSAFLGFLLQWSG-ALALGATSA 300 (388)
Q Consensus 226 ~~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~~a 300 (388)
.|+..++.+ ........++...+.+.+.......+.+... ...++...|..+++.++++....+.. +..+++.+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a 241 (299)
T PRK11453 162 NKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYET 241 (299)
T ss_pred HHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 998765432 2233344444444443333333333432211 01234556777778877777666544 578999999
Q ss_pred hhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521 301 ISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN 348 (388)
Q Consensus 301 ~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~ 348 (388)
.+++.+.+++|++++++|++++||+++..+++|++++++|+++..+.+
T Consensus 242 ~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 242 WRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 999999999999999999999999999999999999999998765533
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.94 E-value=3.5e-24 Score=197.80 Aligned_cols=254 Identities=17% Similarity=0.104 Sum_probs=198.8
Q ss_pred HHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHH
Q 016521 77 IIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFY 156 (388)
Q Consensus 77 ~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~ 156 (388)
.....|+.+++ +.| |..+++.|++++.+++.++...+ +++++..+.....++..+++..+.+.|++|++++.+
T Consensus 4 ~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~ 76 (260)
T TIGR00950 4 TGVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRRR-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEA 76 (260)
T ss_pred hHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHhc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh
Confidence 35667888876 466 89999999999888877654433 122222223444455667888899999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc-ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 016521 157 QMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD-LQFSLFGACVALAWIVPSAVNKILWSNLQQRESW 235 (388)
Q Consensus 157 ~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~ 235 (388)
+++.++.|+++++++++++|||++++++.+++++++|+.++...+ .+.+..|+++++.++++|+.+.++.|+..++.+.
T Consensus 77 ~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~ 156 (260)
T TIGR00950 77 ALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP 156 (260)
T ss_pred HHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc
Confidence 999999999999999999999999999999999999998875433 4556789999999999999999999998766554
Q ss_pred CHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHH-HHHHHHHHHhccCchhhHHHhhhhhHHHH
Q 016521 236 TALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGF-LLQWSGALALGATSAISHVVLGQFKTCII 314 (388)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~~~~a~~~sv~~~l~~v~~ 314 (388)
++.....+...++.+.+.+.....+... ..+...|..+.+.++++. ......++++++.++.+++++.+++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~ 232 (260)
T TIGR00950 157 ELLQFTGWVLLLGALLLLPFAWFLGPNP----QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVA 232 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCC----CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 4555555666777766666654433221 124445655666666654 44455678999999999999999999999
Q ss_pred HHHHHhhcCCCccccchhhhHHHHHHH
Q 016521 315 LLGNYYIFGANPGTTSICGAFVAIVGM 341 (388)
Q Consensus 315 ~~~~~l~~ge~~t~~~i~G~~li~~Gv 341 (388)
++++++++||++++.+++|+.+++.|+
T Consensus 233 ~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 233 LLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999986
No 15
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.93 E-value=4.4e-23 Score=193.68 Aligned_cols=264 Identities=14% Similarity=0.031 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhh
Q 016521 66 SLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLAN 145 (388)
Q Consensus 66 ~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (388)
.+++-.++........|+.+++ +| |..+.++|++++.+++.++...++. +.++++....+..|+..+....+.+
T Consensus 16 ~~~la~~~~~~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~ 89 (293)
T PRK10532 16 LLLIAMASIQSGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWRL---RFAKEQRLPLLFYGVSLGGMNYLFY 89 (293)
T ss_pred HHHHHHHHHHhhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHhc---cCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445556689999987 77 9999999999999888766432221 1223444445556666777778889
Q ss_pred hhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeec--c-ccccHHHHHHHHHHHHHHHHH
Q 016521 146 VSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT--D-LQFSLFGACVALAWIVPSAVN 222 (388)
Q Consensus 146 ~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~--~-~~~~~~G~~~~l~a~~~~a~~ 222 (388)
++++|+|++.+.++..+.|+++++++. |+++.. .++.++++|+.++... + .+.+..|++++++++++||.|
T Consensus 90 ~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~ 163 (293)
T PRK10532 90 LSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIY 163 (293)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988763 555544 4566778898776532 2 234567999999999999999
Q ss_pred HHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHH-HHHHHhccCchh
Q 016521 223 KILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQW-SGALALGATSAI 301 (388)
Q Consensus 223 ~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~i~~~~a~ 301 (388)
.+..|+..++ .++... .++..++...+.++....+. . ..++...|..+++.++++....+ .+++.+++.+|.
T Consensus 164 ~v~~r~~~~~--~~~~~~-~~~~~~~~~~l~~~~~~~~~-~---~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~ 236 (293)
T PRK10532 164 ILSGQRAGAE--HGPATV-AIGSLIAALIFVPIGALQAG-E---ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTR 236 (293)
T ss_pred HHHHHHHhcc--CCchHH-HHHHHHHHHHHHHHHHHccC-c---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 9999988654 345554 34555555555555443322 1 12334445445566666665555 557899999999
Q ss_pred hHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521 302 SHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN 348 (388)
Q Consensus 302 ~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~ 348 (388)
+++++.+++|++++++|++++||++++.+++|++++++|++.+.+..
T Consensus 237 ~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 237 TFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999998887543
No 16
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.93 E-value=1.2e-24 Score=185.23 Aligned_cols=285 Identities=18% Similarity=0.226 Sum_probs=242.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhh
Q 016521 65 ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLA 144 (388)
Q Consensus 65 ~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (388)
...+.|++.|+.+++.||++++..||+....+.+.|.+++.+.+.+++..+..+.+ .+.....++.++.....+...
T Consensus 9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~ 85 (309)
T COG5070 9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTS 85 (309)
T ss_pred hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhc
Confidence 35678999999999999999999999988899999999999988888766644322 222223456666666666778
Q ss_pred hhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecccc--------ccHHHHHHHHHHH
Q 016521 145 NVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQ--------FSLFGACVALAWI 216 (388)
Q Consensus 145 ~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~a~ 216 (388)
..+++|.+++.|++.+.++.+.++..+..++|.|++..+..+.++.+..-.+..++|.+ .+ .|.+|....+
T Consensus 86 SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nc 164 (309)
T COG5070 86 SKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNC 164 (309)
T ss_pred ccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhh
Confidence 89999999999999999999999999999999999999999999999988888888763 23 6999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccc--cccchhhHHHHHHHHHHHHHHHHHHHHH
Q 016521 217 VPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLS--FNWNFSNTLAILMSAFLGFLLQWSGALA 294 (388)
Q Consensus 217 ~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 294 (388)
++.+.+.+..|+-.+-.+...++.++|.+..+.+.++.+..++|++...+ .+........+.++|+++++.+++.-|+
T Consensus 165 lssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWc 244 (309)
T COG5070 165 LSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWC 244 (309)
T ss_pred HhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhcccee
Confidence 99999998887766655667789999999999999999998888765432 2333445678899999999999999999
Q ss_pred hccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccccc
Q 016521 295 LGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSK 353 (388)
Q Consensus 295 i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~~~ 353 (388)
++.++.++.+++|.++.....+.|.++|||+.+...+..+.+-+.+...|.+.+.++++
T Consensus 245 vrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q 303 (309)
T COG5070 245 VRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ 303 (309)
T ss_pred EeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888899988765433
No 17
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.6e-20 Score=167.86 Aligned_cols=256 Identities=15% Similarity=0.195 Sum_probs=212.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHH
Q 016521 90 FQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIV 168 (388)
Q Consensus 90 ~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~ 168 (388)
|..|.++.++|-+++.++-......+..+ .+...|++ ....++...++..|++.||+|++-++..++|++-.+.++
T Consensus 48 F~~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm 124 (327)
T KOG1581|consen 48 FEHSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM 124 (327)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence 45589999999999988875554333222 23333444 667788888899999999999999999999999999999
Q ss_pred HHHHHHhccccchhhHHHHHhhhhheeeeeeccc---------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHH
Q 016521 169 LAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL---------QFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALA 239 (388)
Q Consensus 169 l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~ 239 (388)
++..++.|+|+++.+++...++.+|+.+....+. .+++.|+.++....+..++-+..++++.+++++++++
T Consensus 125 lmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~ 204 (327)
T KOG1581|consen 125 LMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLH 204 (327)
T ss_pred HHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhH
Confidence 9999999999999999999999999988776421 2568999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHhcCCCccc---cc-ccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHH
Q 016521 240 LMWKTTPITLLFLGSLIPCLDPPGVL---SF-NWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIIL 315 (388)
Q Consensus 240 l~~~~~~~~~~~l~~~~~~~~~~~~~---~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~ 315 (388)
+|++.++++++.-.... .+....+ ++ .-++..+.-+.+.+.++...+.+.|..+++.|+.+.+.+.+.+.++++
T Consensus 205 mM~~vNLf~~i~~~~~l--i~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si 282 (327)
T KOG1581|consen 205 MMFGVNLFSAILNGTYL--ILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSI 282 (327)
T ss_pred HHHHHHHHHHHHHHHhh--hcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHH
Confidence 99999999887655542 2221111 11 123445666777778888889899999999999999999999999999
Q ss_pred HHHHhhcCCCccccchhhhHHHHHHHHHHHhhhcc
Q 016521 316 LGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLC 350 (388)
Q Consensus 316 ~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~ 350 (388)
+++.+.||++++..|+.|..+++.|+.+-.+.+.+
T Consensus 283 ~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 283 MLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 99999999999999999999999999887776655
No 18
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.88 E-value=1.8e-20 Score=175.07 Aligned_cols=261 Identities=10% Similarity=-0.032 Sum_probs=174.9
Q ss_pred HHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHcc--CCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchh
Q 016521 76 SIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFA--LLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSV 153 (388)
Q Consensus 76 ~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~ 153 (388)
......|...++ -+ + .++++...+.+++.++...+ +.+.++++++.+......++.......+.+.++++.++
T Consensus 15 ~~~~~~k~~~~~--~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 89 (281)
T TIGR03340 15 GWNLMAKSHADK--EP-D--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADV 89 (281)
T ss_pred HHHHHHhhcCCc--hh-H--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 334555644443 12 3 34666666655555544332 11112222333333555566677788899999999999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc-ccccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016521 154 GFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD-LQFSLFGACVALAWIVPSAVNKILWSNLQQR 232 (388)
Q Consensus 154 s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~ 232 (388)
+..+.+.++.|+++++++++++|||+++++|+|++++++|+.++...+ .+.+..|+.++++++++|++|.+..|+..++
T Consensus 90 ~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~ 169 (281)
T TIGR03340 90 GLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALG 169 (281)
T ss_pred hhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccc
Confidence 999999999999999999999999999999999999999998775433 2345678889999999999999987765432
Q ss_pred cC--CCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhh
Q 016521 233 ES--WTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFK 310 (388)
Q Consensus 233 ~~--~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~ 310 (388)
.+ .+......++.......+.+.....+..... ..+...+..+...++.+...+...+..+++.++.+.+...++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~ 247 (281)
T TIGR03340 170 VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF--PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTS 247 (281)
T ss_pred hhcccccHHHHHHHHHHHHHHHHHHHHHHhccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccH
Confidence 21 1111112222212111111111111211110 1112223344444555555556677899999999999999999
Q ss_pred HHHHHHHHHhhcCCCccccchhhhHHHHHHHHH
Q 016521 311 TCIILLGNYYIFGANPGTTSICGAFVAIVGMSF 343 (388)
Q Consensus 311 ~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~l 343 (388)
|++++++|++++||+++..+++|+++++.|+.+
T Consensus 248 pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 248 IVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 999999999999999999999999999999865
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.85 E-value=2.9e-18 Score=160.29 Aligned_cols=265 Identities=17% Similarity=0.098 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcch
Q 016521 73 VAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNS 152 (388)
Q Consensus 73 ~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s 152 (388)
.+.......|....+ ..+ +....+.|...+.+........+.....+..+...+..+..++.......+.+.++++++
T Consensus 18 ~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (292)
T COG0697 18 LWGLSFIALKLAVES-LDP-FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTS 95 (292)
T ss_pred HHHHHHHHHHHHhcc-cCC-hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 333334444554443 233 566667799988887444433322111111112123355556667778889999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHH-HHhccccchhhHHHHHhhhhheeeeeecccccc---HHHHHHHHHHHHHHHHHHHHHHH
Q 016521 153 VGFYQMAKIAVTPSIVLAEF-ICYRKRVSVLKVITLTAVSIGVAVATVTDLQFS---LFGACVALAWIVPSAVNKILWSN 228 (388)
Q Consensus 153 ~s~~~il~~~~p~~~~l~~~-~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~---~~G~~~~l~a~~~~a~~~i~~~~ 228 (388)
++.++++.++.|+++.++++ +++|||++++++.++++++.|+.++...+...+ ..|+++++.++++++++.+..|+
T Consensus 96 ~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~ 175 (292)
T COG0697 96 ASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKR 175 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999997 666999999999999999999999988665433 58999999999999999999888
Q ss_pred hhhccCCCHHHHHH-HHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHH-HHHHHHHHhccCchhhHHHh
Q 016521 229 LQQRESWTALALMW-KTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFL-LQWSGALALGATSAISHVVL 306 (388)
Q Consensus 229 ~~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~i~~~~a~~~sv~ 306 (388)
.. +.++..... ++.. ...++.......... .......+..+...++++.. .+...+..+++.++...+..
T Consensus 176 ~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 247 (292)
T COG0697 176 LS---RLGPVTLALLLQLL--LALLLLLLFFLSGFG---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALL 247 (292)
T ss_pred hc---CCChHHHHHHHHHH--HHHHHHHHHHhcccc---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 76 344555544 3333 111122111122111 12344456666666766664 55666789999999999999
Q ss_pred hhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521 307 GQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL 347 (388)
Q Consensus 307 ~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~ 347 (388)
.+++|+.+++++++++||+++..+++|+++++.|+.+.+..
T Consensus 248 ~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 248 SLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999887654
No 20
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.85 E-value=6.7e-19 Score=162.24 Aligned_cols=242 Identities=13% Similarity=0.056 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCC-----C-CCCcccc-hhHHHHHHHHHH
Q 016521 66 SLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLP-----A-SPPAKSG-LLSLFTLGFVMS 138 (388)
Q Consensus 66 ~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~-----~-~~~~~~~-~~~~~~~~~~~~ 138 (388)
.+.+..+.+.......|. ..+ ++ |..++++|++++.+++.++...++++ + ++.++++ .......|++.+
T Consensus 6 ~~i~a~~~wg~~~~~~k~-~~~--~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 81 (256)
T TIGR00688 6 VSLLASFLFGYMYYYSKL-LKP--LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIG 81 (256)
T ss_pred HHHHHHHHHHHHHHHHHH-hcc--CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence 334444455666777887 444 77 99999999999988766543222211 1 1111222 223556677788
Q ss_pred HHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHH
Q 016521 139 FSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVP 218 (388)
Q Consensus 139 ~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~ 218 (388)
.+..+.++|+++++++.++++.++.|+++++++++++|||++++++++++++++|++++...+.+.+ .++++++++
T Consensus 82 ~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~ 157 (256)
T TIGR00688 82 FNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFS 157 (256)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHH
Confidence 8889999999999999999999999999999999999999999999999999999987654322221 357889999
Q ss_pred HHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccch-hhHHHHHHHHHHHHHHHHHHHHHhcc
Q 016521 219 SAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNF-SNTLAILMSAFLGFLLQWSGALALGA 297 (388)
Q Consensus 219 ~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~i~~ 297 (388)
||.|.+..|+..++ + ..+.... .....+...+.....+.+.. . .++. ..|..++..++++...+...+..+++
T Consensus 158 ~a~~~i~~~~~~~~-~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~~ 231 (256)
T TIGR00688 158 FTAYGLIRKALKNT-D--LAGFCLE-TLSLMPVAIYYLLQTDFATV-Q-QTNPFPIWLLLVLAGLITGTPLLAFVIAANR 231 (256)
T ss_pred HHHHHHHHhhcCCC-C--cchHHHH-HHHHHHHHHHHHHHhccCcc-c-ccCchhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999998887543 2 2222111 11111111111111111111 1 1122 35666666666666666777889999
Q ss_pred CchhhHHHhhhhhHHHHHHHHHhh
Q 016521 298 TSAISHVVLGQFKTCIILLGNYYI 321 (388)
Q Consensus 298 ~~a~~~sv~~~l~~v~~~~~~~l~ 321 (388)
.+|.++++..+++|++++++++++
T Consensus 232 ~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 232 LPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999765
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.3e-19 Score=155.82 Aligned_cols=254 Identities=12% Similarity=0.109 Sum_probs=207.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHH
Q 016521 90 FQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVL 169 (388)
Q Consensus 90 ~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l 169 (388)
|.|.+.+.+.|..+..+..-++...+. ..+.++..-+....++.-+.+.....|.|++|+|-++..+-+++-|+-+++
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir~--~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi 127 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIRK--KTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI 127 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeecc--cccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence 556788888888888777755543332 222222222335667777778888999999999999999999999999999
Q ss_pred HHHHHhccccchhhHHHHHhhhhheeeeeeccc-------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHH
Q 016521 170 AEFICYRKRVSVLKVITLTAVSIGVAVATVTDL-------QFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMW 242 (388)
Q Consensus 170 ~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~ 242 (388)
++.++.+++++|+++..++.+++||++..+.+. ....+|-++.+++.-..++....++++++.+..+.-++|.
T Consensus 128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~ 207 (337)
T KOG1580|consen 128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMF 207 (337)
T ss_pred eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHH
Confidence 999999999999999999999999999877532 2335788999999999999999999999888888899999
Q ss_pred HHhHHHHHHHHHHHHhcCC-Cccccccc-chhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHh
Q 016521 243 KTTPITLLFLGSLIPCLDP-PGVLSFNW-NFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYY 320 (388)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l 320 (388)
++++.+.+.+...+.+.++ +..+.+.. .+..|+-+...++.+.+.+++.|..+...+|.+.|++.+-+..++++.+++
T Consensus 208 ~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVl 287 (337)
T KOG1580|consen 208 YTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVL 287 (337)
T ss_pred HHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHH
Confidence 9999998877666554433 22222222 345577788888888888999999999999999999999999999999999
Q ss_pred hcCCCccccchhhhHHHHHHHHHHH
Q 016521 321 IFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 321 ~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
+|++++++.||+|..+++.|...-.
T Consensus 288 lf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 288 LFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 9999999999999999999987644
No 22
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.80 E-value=3e-18 Score=157.31 Aligned_cols=220 Identities=17% Similarity=0.148 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc-------
Q 016521 130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL------- 202 (388)
Q Consensus 130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~------- 202 (388)
.+.++.+..+.+...|.||+|++++..+++.+++-.|+.+++.++..||+++.+.+++++.++|+++++.+|.
T Consensus 162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~ 241 (416)
T KOG2765|consen 162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLP 241 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCC
Confidence 4445556667788899999999999999999999999999999999999999999999999999999998743
Q ss_pred -cccHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccch-hhHHHHH
Q 016521 203 -QFSLFGACVALAWIVPSAVNKILWSNLQQRE--SWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNF-SNTLAIL 278 (388)
Q Consensus 203 -~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~--~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~ 278 (388)
+....|.++++++++.||+|.++.|+...++ ++|.-.+..+..++..+.+.|...+++......+..+. .....++
T Consensus 242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv 321 (416)
T KOG2765|consen 242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVV 321 (416)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeee
Confidence 2337899999999999999999999887555 56666666677777776666554444332222222211 1223344
Q ss_pred HHHHHH-HHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521 279 MSAFLG-FLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL 349 (388)
Q Consensus 279 ~~~~~~-~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~ 349 (388)
+.++.+ ++--+.+.+..-.++|+.+++-..+..+++++...++-|.++|+.+++|...+++|.+.-++..+
T Consensus 322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 444444 44446777788899999999999999999999999999999999999999999999988776544
No 23
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.77 E-value=2.6e-16 Score=141.02 Aligned_cols=275 Identities=14% Similarity=0.035 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCC-C-C--CcccchhHHHHHHHHHHH
Q 016521 64 IASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPA-S-P--PAKSGLLSLFTLGFVMSF 139 (388)
Q Consensus 64 ~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~ 139 (388)
+..+..+ +.+.-.-++.|.+-. .| +..+...|.+-+++++..+....++.+ . . .+++........+...+.
T Consensus 10 l~~l~Ay-~lwG~lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~ 84 (293)
T COG2962 10 LLALLAY-LLWGLLPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGL 84 (293)
T ss_pred HHHHHHH-HHHHHHHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3344443 334445666666654 56 889999999888887765543322211 1 1 112222335666777788
Q ss_pred HHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHH
Q 016521 140 STGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPS 219 (388)
Q Consensus 140 ~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 219 (388)
+++...||..+-.+=-+++=.+..|.+.++++++++|||+++.||++++++.+||..-+....+.+|..+.+++ +|
T Consensus 85 nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la~----sf 160 (293)
T COG2962 85 NWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALAL----SF 160 (293)
T ss_pred HHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH----HH
Confidence 88888899988667677777788899999999999999999999999999999999988888888887776655 78
Q ss_pred HHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCc
Q 016521 220 AVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATS 299 (388)
Q Consensus 220 a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~ 299 (388)
++|...-|+ .++++.+-...-...-.+..+....+.+..+-+....+...+..+...|..+..--......-++.+
T Consensus 161 ~~Ygl~RK~----~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lp 236 (293)
T COG2962 161 GLYGLLRKK----LKVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLP 236 (293)
T ss_pred HHHHHHHHh----cCCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCC
Confidence 999977333 3466665554444444433333333333322111123445667777777766654455556789999
Q ss_pred hhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccc
Q 016521 300 AISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCN 351 (388)
Q Consensus 300 a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~ 351 (388)
-.+.++..|++|....+++++++||+++..+....+.+-+|+.+|.+...++
T Consensus 237 ls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~ 288 (293)
T COG2962 237 LSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYT 288 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999876543
No 24
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.77 E-value=5e-16 Score=143.03 Aligned_cols=278 Identities=14% Similarity=0.149 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCh-HHHHHHHHHHHHHHHHHHHHHccC-----CCCCCC------cccchhHHHHHHHH
Q 016521 69 FNFVVAVSIIFMNKWVLKNIGFQF-PIFLSFIHYAVSWALMAVLNAFAL-----LPASPP------AKSGLLSLFTLGFV 136 (388)
Q Consensus 69 ~~~~~s~~~~~~nK~~~~~~g~~~-p~~l~~~r~~~a~~~l~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~ 136 (388)
.-.+-..+..+.-|+.-...+.+| |.+..++-=++-.++......... +..+.. .++.-.++..-++.
T Consensus 22 ~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~i 101 (345)
T KOG2234|consen 22 VLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALI 101 (345)
T ss_pred HHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHH
Confidence 335566777777787777655554 666655554444443333222221 111111 12222344445677
Q ss_pred HHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc-----------cccc
Q 016521 137 MSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD-----------LQFS 205 (388)
Q Consensus 137 ~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~-----------~~~~ 205 (388)
+++.+.+.+.++.+.+++++|+....-...+++++.+++++|.+++||.++++.+.|+.++-.+. .+..
T Consensus 102 YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~ 181 (345)
T KOG2234|consen 102 YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNP 181 (345)
T ss_pred HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccch
Confidence 88877799999999999999999999999999999999999999999999999999999886211 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCccc----ccccchhhHHHHHHHH
Q 016521 206 LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVL----SFNWNFSNTLAILMSA 281 (388)
Q Consensus 206 ~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~ 281 (388)
+.|....+.+++.+++-.++.+++.|+.+.+.|........++.++.+......|..... -.+|+...|..++..+
T Consensus 182 ~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a 261 (345)
T KOG2234|consen 182 FLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNA 261 (345)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHh
Confidence 799999999999999999999999998887777666666677777766666555553331 1245556677777777
Q ss_pred HHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhcc
Q 016521 282 FLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLC 350 (388)
Q Consensus 282 ~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~ 350 (388)
+.|...++ .+++.+-..-.....+..+++.+.++.+||-++|....+|..+++.++.+|+..+++
T Consensus 262 ~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 262 VGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred ccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 77766544 578888888888888888999999999999999999999999999999999854443
No 25
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.6e-17 Score=146.00 Aligned_cols=286 Identities=14% Similarity=0.176 Sum_probs=223.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHHHH
Q 016521 59 RLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQ-FPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLGFV 136 (388)
Q Consensus 59 ~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~-~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 136 (388)
|+.....+....++..+..-....++++..||+ |-+.+|+.|+++-..+-++-. +. ....++..|++ ...++.+
T Consensus 40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~--~~--~~~k~r~iP~rtY~~la~~ 115 (367)
T KOG1582|consen 40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL--QL--IQTKRRVIPWRTYVILAFL 115 (367)
T ss_pred hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE--Ee--ecccceecchhHhhhhHhh
Confidence 444445555666777777788889999988998 668999999887543332221 11 11223445555 5556667
Q ss_pred HHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc----cccHHHHHHH
Q 016521 137 MSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL----QFSLFGACVA 212 (388)
Q Consensus 137 ~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~----~~~~~G~~~~ 212 (388)
...+.++.|-|+.|++-+...+.|++-.+-+++.+.++-|+|+.+.++.+..+..+|.++.+..|. +++..|+...
T Consensus 116 t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mI 195 (367)
T KOG1582|consen 116 TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMI 195 (367)
T ss_pred hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHH
Confidence 777889999999999999999999999999999999999999999999999999999999988664 5778999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCC-ccccc--ccchhhHHHHHHHHHHHHHHHH
Q 016521 213 LAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPP-GVLSF--NWNFSNTLAILMSAFLGFLLQW 289 (388)
Q Consensus 213 l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~--~~~~~~~~~l~~~~~~~~~~~~ 289 (388)
-++.++.|+-...+++..+..+-+..++.+|...++.++++..+....+. ..+.+ +.+........+-+..+++...
T Consensus 196 sgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~ 275 (367)
T KOG1582|consen 196 SGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIV 275 (367)
T ss_pred HHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHH
Confidence 99999999988899988888777788999999988888777666554331 11111 1122233444555555666566
Q ss_pred HHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521 290 SGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN 348 (388)
Q Consensus 290 ~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~ 348 (388)
+...+++..+|.++..+.+.+..+++++++++|..++|....-|..+++.|+++-.+.+
T Consensus 276 ~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 276 FVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 66778999999999999999999999999999999999999999999999998766655
No 26
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.76 E-value=8.9e-16 Score=143.67 Aligned_cols=256 Identities=14% Similarity=0.089 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcc
Q 016521 72 VVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYN 151 (388)
Q Consensus 72 ~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 151 (388)
.++..+....|.+. |++ +..+. |..++.+++..+....+.++. ..++.....+..|+..+..+.+++.|.+++
T Consensus 11 ~~wGs~g~~~k~~~---g~~-~~~~~--~~~~g~l~~~~~~~~~~~~~~-~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~ 83 (290)
T TIGR00776 11 LFWGSFVLINVKIG---GGP-YSQTL--GTTFGALILSIAIAIFVLPEF-WALSIFLVGLLSGAFWALGQINQFKSMRYM 83 (290)
T ss_pred HHHhhhHHHHhccC---CCH-HHHHH--HHHHHHHHHHHHHHHHhCCcc-cccHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 33344455556554 577 33333 677777666544332222221 112222224555667788888999999999
Q ss_pred hhhHHHHHHH-hHHHHHHHHHHHHhccccchhh----HHHHHhhhhheeeeeecccc-------cc-HHHHHHHHHHHHH
Q 016521 152 SVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLK----VITLTAVSIGVAVATVTDLQ-------FS-LFGACVALAWIVP 218 (388)
Q Consensus 152 s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~----~~~l~l~~~Gv~l~~~~~~~-------~~-~~G~~~~l~a~~~ 218 (388)
+++.+..+.+ ..+++..+.+.+++||+.++++ +++++++++|+.+....+.+ .+ ..|+++++.++++
T Consensus 84 gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~ 163 (290)
T TIGR00776 84 GVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIG 163 (290)
T ss_pred hHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHH
Confidence 9999988887 6667788999999999999999 99999999999887653211 23 6899999999999
Q ss_pred HHHHHHHHHHhhhccCCCHHHHHHHHhH---HHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 016521 219 SAVNKILWSNLQQRESWTALALMWKTTP---ITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALAL 295 (388)
Q Consensus 219 ~a~~~i~~~~~~~~~~~~~~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i 295 (388)
|+.|.+..|... .+|++..+.+.. ++...+.+.. .+.. .+.....+.....|++....+...+...
T Consensus 164 y~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~Gi~~~ia~~~y~~~~ 232 (290)
T TIGR00776 164 YLVYVVVAKAFG----VDGLSVLLPQAIGMVIGGIIFNLGH--ILAK-----PLKKYAILLNILPGLMWGIGNFFYLFSA 232 (290)
T ss_pred HHHHHHHHHHcC----CCcceehhHHHHHHHHHHHHHHHHH--hccc-----chHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999988652 567766444432 3332222211 1111 1223333333347776655555556777
Q ss_pred c-cCchhhHHHhhhhhHHHHHHHHHhhcCCCccccch----hhhHHHHHHHHHHH
Q 016521 296 G-ATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSI----CGAFVAIVGMSFYT 345 (388)
Q Consensus 296 ~-~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i----~G~~li~~Gv~ly~ 345 (388)
+ +.++.+++++.+++|+.+++++++++||+.++.++ +|+++++.|+.+-.
T Consensus 233 ~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 233 QPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 8 99999999999999999999999999999999999 99999999997753
No 27
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.73 E-value=4.1e-17 Score=138.26 Aligned_cols=139 Identities=29% Similarity=0.447 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc-----cCCCHHHHHHHHhHHHHHHHHHHHHhcCCCccccccc---------chhh
Q 016521 208 GACVALAWIVPSAVNKILWSNLQQR-----ESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNW---------NFSN 273 (388)
Q Consensus 208 G~~~~l~a~~~~a~~~i~~~~~~~~-----~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~ 273 (388)
|+++++++.++.|++.++.|+..++ .+.+++++++|+++.+.+.+++...+.|.+....... +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7899999999999999999998877 6899999999999999999999988887765322111 2355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 274 TLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 274 ~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
+..++.+|+.++..+++.+.+++++||+++++++.+|.++++++|+++|||++|..+++|++++++|+++|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 7888899999999999999999999999999999999999999999999999999999999999999999975
No 28
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.73 E-value=4e-17 Score=143.95 Aligned_cols=277 Identities=12% Similarity=0.069 Sum_probs=200.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHHHHHHHHHhhh
Q 016521 67 LTFNFVVAVSIIFMNKWVLKNIGFQ-FPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLGFVMSFSTGLA 144 (388)
Q Consensus 67 ~~~~~~~s~~~~~~nK~~~~~~g~~-~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 144 (388)
+.+.+.+..+..+.-..+.+. .| --..+|+.|++.-..--+++. .+... .+++.|.+ ....-..+...+.++
T Consensus 8 i~~vf~GCcsnvv~lE~L~~~--~pgsgNLITFaqFlFia~eGlif~--skf~~--~k~kiplk~Y~i~V~mFF~vnv~N 81 (330)
T KOG1583|consen 8 ISLVFGGCCSNVVFLELLVRN--EPGSGNLITFAQFLFIATEGLIFT--SKFFT--VKPKIPLKDYAITVAMFFIVNVTN 81 (330)
T ss_pred HHHHHHhhhchHHHHHHHHHh--CCCCeeehHHHHHHHHHHhceeee--ccccc--cCCCCchhhhheehheeeeeeeec
Confidence 333333333334444444443 11 125788999887655433332 11111 11333333 222333445567899
Q ss_pred hhhhhc-chhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc---c---------c---cc---
Q 016521 145 NVSLKY-NSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD---L---------Q---FS--- 205 (388)
Q Consensus 145 ~~al~~-~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~---~---------~---~~--- 205 (388)
|.++++ +|++...+.++-.++.+++++++++|+|++.+|+.+++++.+|+.+.+... . + .+
T Consensus 82 N~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~ 161 (330)
T KOG1583|consen 82 NYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFW 161 (330)
T ss_pred cceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchH
Confidence 999998 899999999999999999999999999999999999999999999987521 1 0 01
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHH-Hhc---------CCCccccccc-chhh
Q 016521 206 -LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLI-PCL---------DPPGVLSFNW-NFSN 273 (388)
Q Consensus 206 -~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~---------~~~~~~~~~~-~~~~ 273 (388)
..|+.+...+.+..|...++++.+.+++.-++-+.++|+...+.+.++... .+. |.-....... -+..
T Consensus 162 w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~ 241 (330)
T KOG1583|consen 162 WLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSM 241 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHH
Confidence 368888899999999999999999999989999999999999887765432 010 1000011111 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521 274 TLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL 349 (388)
Q Consensus 274 ~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~ 349 (388)
|..++.+++.-++..-+.+.+-..+++.+++++.+++.-+..+++.+.|++++|+..|+|..+++.|-++|.....
T Consensus 242 ~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~ 317 (330)
T KOG1583|consen 242 WVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWN 317 (330)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 7777788777776555667778999999999999999999999999999999999999999999999999976543
No 29
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.73 E-value=3.9e-16 Score=137.89 Aligned_cols=278 Identities=16% Similarity=0.199 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHHhh-----ccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCC-----------Cc--ccchhHHHH
Q 016521 71 FVVAVSIIFMNKWVLK-----NIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASP-----------PA--KSGLLSLFT 132 (388)
Q Consensus 71 ~~~s~~~~~~nK~~~~-----~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~-----------~~--~~~~~~~~~ 132 (388)
....+..++..||.=+ ..||..|...+..-++--++.+.++...+.+...+ .. .-.|...++
T Consensus 12 vvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~ 91 (372)
T KOG3912|consen 12 VVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLP 91 (372)
T ss_pred hhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecC
Confidence 4455666778888654 34577788777776666666666554443221110 00 112233556
Q ss_pred HHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc----------
Q 016521 133 LGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL---------- 202 (388)
Q Consensus 133 ~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------- 202 (388)
-.++-.....+.|.+|.+++++.+||++.+..+|+.+++.-+++++++.++|+++..+.+|++++...|.
T Consensus 92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~ 171 (372)
T KOG3912|consen 92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDY 171 (372)
T ss_pred hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccc
Confidence 6777777778889999999999999999999999999999999999999999999999999998876532
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHH-Hhc-----CCCcc-ccccc-chh-h
Q 016521 203 QFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLI-PCL-----DPPGV-LSFNW-NFS-N 273 (388)
Q Consensus 203 ~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~-----~~~~~-~~~~~-~~~-~ 273 (388)
+.-..|+++.+.+-+.-|.+.+..++..++++++|.+...|...++.+.+..+. +.. +...- ..-.| ++. .
T Consensus 172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~ 251 (372)
T KOG3912|consen 172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDA 251 (372)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHH
Confidence 233679999999999999999999999999999999999999999855543333 221 11100 00001 110 0
Q ss_pred --------HHHHHHHHHHHH--HHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHH
Q 016521 274 --------TLAILMSAFLGF--LLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSF 343 (388)
Q Consensus 274 --------~~~l~~~~~~~~--~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~l 343 (388)
...+...+.... +.|+......+..|+++-.+...+++.+..+++.....|.+...|+.|.++.+.|+++
T Consensus 252 ~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~l 331 (372)
T KOG3912|consen 252 FAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIIL 331 (372)
T ss_pred HHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222222211 2334445567889999999999999999999999999999999999999999999999
Q ss_pred HHhhh
Q 016521 344 YTYLN 348 (388)
Q Consensus 344 y~~~~ 348 (388)
|+-.-
T Consensus 332 Y~~il 336 (372)
T KOG3912|consen 332 YNQIL 336 (372)
T ss_pred HHHHH
Confidence 98543
No 30
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.71 E-value=6.7e-18 Score=148.08 Aligned_cols=264 Identities=14% Similarity=0.152 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC-CCcccchhHHHHHHHHHHHHHhhhhhhhh
Q 016521 71 FVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS-PPAKSGLLSLFTLGFVMSFSTGLANVSLK 149 (388)
Q Consensus 71 ~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 149 (388)
++.+.++.+..|.+.++ |..+.-.|+++-.++..+....++.+.. ++.+|. + ++.-|+.......+.++|++
T Consensus 47 ~ff~~~~vv~t~~~e~~-----p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~-~-LiLRg~mG~tgvmlmyya~~ 119 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLEND-----PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRK-W-LILRGFMGFTGVMLMYYALM 119 (346)
T ss_pred HHHhhHHHhhhhhhccC-----hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEE-E-EEeehhhhhhHHHHHHHHHh
Confidence 55566665665555443 8888888866665555554333333321 111221 1 22234444445567889999
Q ss_pred cchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeec-----c---------ccccHHHHHHHHHH
Q 016521 150 YNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT-----D---------LQFSLFGACVALAW 215 (388)
Q Consensus 150 ~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~-----~---------~~~~~~G~~~~l~a 215 (388)
|.|.+-+.++..++|.++.+++|.++||+.+..+.++..+.+.||+++.-. + .+.+..|.+.++.+
T Consensus 120 ~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s 199 (346)
T KOG4510|consen 120 YMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISS 199 (346)
T ss_pred hcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHh
Confidence 999999999999999999999999999999999999999999999998642 1 12335678888888
Q ss_pred HHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 016521 216 IVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALAL 295 (388)
Q Consensus 216 ~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i 295 (388)
++.-|.-.++.+++.|+. |...-+.|...++.+..++........ ........|+.++..|+.++..++.....+
T Consensus 200 ~lf~asvyIilR~iGk~~--h~~msvsyf~~i~lV~s~I~~~~ig~~---~lP~cgkdr~l~~~lGvfgfigQIllTm~l 274 (346)
T KOG4510|consen 200 VLFGASVYIILRYIGKNA--HAIMSVSYFSLITLVVSLIGCASIGAV---QLPHCGKDRWLFVNLGVFGFIGQILLTMGL 274 (346)
T ss_pred HhhhhhHHHHHHHhhccc--cEEEEehHHHHHHHHHHHHHHhhccce---ecCccccceEEEEEehhhhhHHHHHHHHHh
Confidence 888777777777776653 343344455555544433332222211 112233456777778888998888887776
Q ss_pred ccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 296 GATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 296 ~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
++--|-..++..+..-+++.++.+++|||.+|+++++|+++++.+..+-..
T Consensus 275 QiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 275 QIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL 325 (346)
T ss_pred hhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence 666666678888999999999999999999999999999999988866543
No 31
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.71 E-value=8.1e-15 Score=128.07 Aligned_cols=249 Identities=14% Similarity=0.067 Sum_probs=181.6
Q ss_pred HHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHH
Q 016521 80 MNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMA 159 (388)
Q Consensus 80 ~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il 159 (388)
+.|-+|-. +. |.-.+.+|..++.+++..+.+-.+ .+..+++...+...|...+..+.+.|.|++.+|.+.+..+
T Consensus 30 ~Ak~LFP~--vG-~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAi 103 (292)
T COG5006 30 FAKSLFPL--VG-AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAI 103 (292)
T ss_pred HHHHHccc--cC-hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhh
Confidence 34667766 33 889999999999998876643322 2234555556777888888889999999999999999999
Q ss_pred HHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc---ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 016521 160 KIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD---LQFSLFGACVALAWIVPSAVNKILWSNLQQRESWT 236 (388)
Q Consensus 160 ~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~ 236 (388)
-.+-|+.+.+++ .+|..-.-| +.+.+.|+.+..... .+.|+.|..+++++..||+.|.+..||.-+.. +
T Consensus 104 EF~GPL~vA~~~----sRr~~d~vw--vaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~ 175 (292)
T COG5006 104 EFTGPLAVALLS----SRRLRDFVW--VALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAE--H 175 (292)
T ss_pred hhccHHHHHHHh----ccchhhHHH--HHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC--C
Confidence 999999888754 255444444 445556765554322 45789999999999999999999998887432 2
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHH-HHHhccCchhhHHHhhhhhHHHHH
Q 016521 237 ALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSG-ALALGATSAISHVVLGQFKTCIIL 315 (388)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~~a~~~sv~~~l~~v~~~ 315 (388)
.-+-+..-..++.+..+|+.....++.. +++.....-+..++++...-|+. ...+++.++-+++++..++|.++.
T Consensus 176 g~~g~a~gm~vAaviv~Pig~~~ag~~l----~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aA 251 (292)
T COG5006 176 GTAGVAVGMLVAALIVLPIGAAQAGPAL----FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAA 251 (292)
T ss_pred CchHHHHHHHHHHHHHhhhhhhhcchhh----cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHH
Confidence 3344445555666555555432222221 23444444455566666555554 678999999999999999999999
Q ss_pred HHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 316 LGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 316 ~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
+.|++++||.+|+.||+|++.++.+..-.++
T Consensus 252 l~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 252 LSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999998865443
No 32
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.70 E-value=1.4e-15 Score=138.00 Aligned_cols=208 Identities=17% Similarity=0.205 Sum_probs=166.5
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc--
Q 016521 125 SGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL-- 202 (388)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~-- 202 (388)
++.+.+..-++++.+.+.+.+.++++++++++|+++.+..+++++++++++|+|++.+||.++++.++|+.++..++.
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 344455555888999999999999999999999999999999999999999999999999999999999998865321
Q ss_pred ---------------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccc-
Q 016521 203 ---------------QFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLS- 266 (388)
Q Consensus 203 ---------------~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~- 266 (388)
+....|+++.+.++++.++..++.++..|+.+.+.+........+++++.++...+.|.....+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~ 174 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISES 174 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccC
Confidence 1135899999999999999999999999988877777766677777777666654444322211
Q ss_pred ---cccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHH
Q 016521 267 ---FNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFV 336 (388)
Q Consensus 267 ---~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~l 336 (388)
..|+...|..+...++.|... -..+|+.+...-+....+..+++.+.++++||.++|....+|..+
T Consensus 175 g~f~G~~~~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 175 GFFHGYSWWVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred CchhhcchHHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 134444455555555555443 346899999999999999999999999999999999999999865
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.59 E-value=1.8e-15 Score=132.07 Aligned_cols=264 Identities=16% Similarity=0.153 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcc
Q 016521 72 VVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYN 151 (388)
Q Consensus 72 ~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 151 (388)
.+..+..+.+..+-.+ |.+-|...+++.+..-+++-.++...|+ +.. +..+.+.+.++++-.-.+.+-..|.||+
T Consensus 28 L~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~~---~~~~~hYilla~~DVEaNy~vV~AyQyT 102 (336)
T KOG2766|consen 28 LLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR-KYI---KAKWRHYILLAFVDVEANYFVVKAYQYT 102 (336)
T ss_pred HHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh-HHH---HHHHHHhhheeEEeecccEEEeeehhhc
Confidence 3445555666666554 5777888898888877776655554443 111 1111224445555444455556799999
Q ss_pred hhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc--------cccHHHHHHHHHHHHHHHHHH
Q 016521 152 SVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL--------QFSLFGACVALAWIVPSAVNK 223 (388)
Q Consensus 152 s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~a~~~~a~~~ 223 (388)
+....+++-+-..|.+++++|+++|.|+++.++.|++++..|++++.+.|. +....|+++.++++-+||+.+
T Consensus 103 smtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSN 182 (336)
T KOG2766|consen 103 SMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSN 182 (336)
T ss_pred chHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeecc
Confidence 999999999888999999999999999999999999999999999887552 344689999999999999999
Q ss_pred HHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhH
Q 016521 224 ILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISH 303 (388)
Q Consensus 224 i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~ 303 (388)
+..+.+.|+ .+..+++....+++++.-.+- ++.|.......+|++.....+. .+++-++..-..-.+++..|++..
T Consensus 183 v~EEflvkn--~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~ 258 (336)
T KOG2766|consen 183 VSEEFLVKN--ADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMF 258 (336)
T ss_pred ccHHHHHhc--CcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEE
Confidence 999888865 678999999999988887776 5566665555667643222222 333333322222356899999999
Q ss_pred HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 304 VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 304 sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
++...-....++++ ..||-+.+|.-.+..+.+..|..+|..
T Consensus 259 nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 259 NLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred EhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 98888888888887 788999999999999999999999843
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.30 E-value=9.2e-12 Score=112.19 Aligned_cols=189 Identities=13% Similarity=0.123 Sum_probs=120.2
Q ss_pred hhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheee--------------------eeeccc-------cc
Q 016521 152 SVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAV--------------------ATVTDL-------QF 204 (388)
Q Consensus 152 s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l--------------------~~~~~~-------~~ 204 (388)
+++.....++..++++++..+.+.++|++..++++.++...|+.. ...++. +.
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~ 82 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN 82 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence 455566666666666666666666666666666666666666543 222211 23
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccc----cccchhhHHHHHHH
Q 016521 205 SLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLS----FNWNFSNTLAILMS 280 (388)
Q Consensus 205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~l~~~ 280 (388)
.+.|....+.++.+.++-.+++++..|+++...+.......+++.+.........+...... ..++...|..+...
T Consensus 83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (222)
T TIGR00803 83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLN 162 (222)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHH
Confidence 46788888888888899999999887665543333333333333332211111111111111 11222223333222
Q ss_pred HHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521 281 AFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY 344 (388)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly 344 (388)
+ ..+.+..+.+++.++++.++...++++++.++++++|||+++..++.|+.+++.|+++|
T Consensus 163 a----~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 163 V----GGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred H----hcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 2 23334667899999999999999999999999999999999999999999999998765
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.12 E-value=2.1e-10 Score=93.06 Aligned_cols=119 Identities=18% Similarity=0.217 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCC-CCCCcccchhHHHHHHHH-HHHHHhhhhhhhhcch
Q 016521 75 VSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLP-ASPPAKSGLLSLFTLGFV-MSFSTGLANVSLKYNS 152 (388)
Q Consensus 75 ~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~s 152 (388)
......+|...++ +| |...+++|+.++.+ +.++......+ ....+++........+.+ .+.+..+.+.++++++
T Consensus 4 a~~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 79 (126)
T PF00892_consen 4 AIYSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS 79 (126)
T ss_pred eeHHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence 3446778888887 77 99999999999997 44433333222 122333333344444544 5778889999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521 153 VGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVA 197 (388)
Q Consensus 153 ~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~ 197 (388)
++..+++.++.|+++++++++++||+++++++.++++++.|+.++
T Consensus 80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998764
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.08 E-value=1.9e-09 Score=84.88 Aligned_cols=125 Identities=17% Similarity=0.088 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCC--CcccchhHHHHHHHHHHHHHhhhhhhhh
Q 016521 72 VVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASP--PAKSGLLSLFTLGFVMSFSTGLANVSLK 149 (388)
Q Consensus 72 ~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~al~ 149 (388)
+++....++.|..+++ .+ |.+-++.|.++....+..+....+..... ..++.+..+...|+..++++.+++.|++
T Consensus 13 ~fa~L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk 89 (140)
T COG2510 13 LFAGLTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALK 89 (140)
T ss_pred HHHHHHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHh
Confidence 3344447888999986 66 99999999998888776655444322221 2344444466778889999999999999
Q ss_pred cchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521 150 YNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV 199 (388)
Q Consensus 150 ~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~ 199 (388)
.-.+|...-+..++|.++++++++++|||++..+|++++++.+|+.+++.
T Consensus 90 ~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 90 KGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred cCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999988753
No 37
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.04 E-value=1.5e-09 Score=87.92 Aligned_cols=124 Identities=19% Similarity=0.170 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHH-HHHHHHHHHHHh
Q 016521 217 VPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFL-GFLLQWSGALAL 295 (388)
Q Consensus 217 ~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~i 295 (388)
++||.+.+..|+..++ .++.....+....+.+ +++...+.+... ...++...+......+++ ....+...+..+
T Consensus 1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 75 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL 75 (126)
T ss_pred ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence 3678889998888765 7899999999988887 555555544332 123344455555555555 355566677899
Q ss_pred ccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521 296 GATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 296 ~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
++.++...++..+++|+++.++++++++|++++.+++|+++++.|+.+.+
T Consensus 76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998754
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.01 E-value=3.6e-09 Score=83.37 Aligned_cols=133 Identities=15% Similarity=0.023 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH
Q 016521 209 ACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQ 288 (388)
Q Consensus 209 ~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 288 (388)
.++++++++.+++..++.|--.+ ++||...+..-+.+..++++............ ...+...|..++++|+.+....
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~~~~k~~lflilSGla~glsw 81 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-GEIGPKSWLFLILSGLAGGLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc-cccCcceehhhhHHHHHHHHHH
Confidence 57899999999999999886664 46676665556666555555544433332221 1245677888899997777766
Q ss_pred HHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521 289 WSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY 344 (388)
Q Consensus 289 ~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly 344 (388)
+++|.+++...+..+..+.-..++++++++++++||++|..+++|+.++.+|..+-
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence 77789999999999999999999999999999999999999999999999998653
No 39
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.98 E-value=4.6e-08 Score=88.85 Aligned_cols=208 Identities=11% Similarity=0.041 Sum_probs=149.8
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhccccchhhH----HHHHhhhhheeeeee
Q 016521 125 SGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRVSVLKV----ITLTAVSIGVAVATV 199 (388)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~~~~~~----~~l~l~~~Gv~l~~~ 199 (388)
+..+..+..|++.+....+++.|+++..+|.+.-+. ..+.+.+.+.+.++|+|-.+..++ ++++++++|+.+.+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 444447778999999999999999998887766554 345566889999999997776664 488899999998887
Q ss_pred cccc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccch
Q 016521 200 TDLQ--------FSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNF 271 (388)
Q Consensus 200 ~~~~--------~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 271 (388)
.|.+ ....|+...+.+.+.|..|.++.+. .+.++++...-++.-..+..+++.... .... .+.
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~----~~k 193 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQAIGMLIGAFIFNLFS-KKPF----FEK 193 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHHHHHHHHHHHHhhcc-cccc----ccc
Confidence 5532 2256999999999999999998665 347788877655433332222222222 1111 111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCcccc----chhhhHHHHHHHH
Q 016521 272 SNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTT----SICGAFVAIVGMS 342 (388)
Q Consensus 272 ~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~----~i~G~~li~~Gv~ 342 (388)
..|. =+..|++....+++.+...+..+..+.=.+..+..+++.+.|.++++|+=+.. .++|.++++.|..
T Consensus 194 ~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 194 KSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred chHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 2222 24566666677777888888999999999999999999999999999998765 4568887777764
No 40
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.91 E-value=6.2e-09 Score=88.08 Aligned_cols=210 Identities=11% Similarity=0.019 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc--cccHH
Q 016521 130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL--QFSLF 207 (388)
Q Consensus 130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~--~~~~~ 207 (388)
..|.+++....+..+..+++.++++.++.+..+.-.|+-+++++.+|+|+...++++.+++..|+++..+.|. ..++.
T Consensus 56 taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~i 135 (290)
T KOG4314|consen 56 TAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEII 135 (290)
T ss_pred ecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhh
Confidence 4455556666666777899999999999999999999999999999999999999999999999999998664 46799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHH-----HH-hc--CCCcccccccchhhHHHHHH
Q 016521 208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSL-----IP-CL--DPPGVLSFNWNFSNTLAILM 279 (388)
Q Consensus 208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~-----~~-~~--~~~~~~~~~~~~~~~~~l~~ 279 (388)
|+.++++++...|+|.+..|+....-+.. +...+++..+.+-+... .. +. |+.+ ++ ....|..+..
T Consensus 136 Gi~~AV~SA~~aAlYKV~FK~~iGnAn~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~q--sF--A~~PWG~l~G 209 (290)
T KOG4314|consen 136 GIACAVGSAFMAALYKVLFKMFIGNANFG--DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQ--SF--AAAPWGCLCG 209 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHH--HH--hhCCchhhhh
Confidence 99999999999999999999887554332 22333333222211111 11 11 2211 11 1123445555
Q ss_pred HHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521 280 SAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
.+.++...++.....+..+.|...|+-..+..+.......++-+-..+...+.|..++..|..+..
T Consensus 210 ~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLii 275 (290)
T KOG4314|consen 210 AAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILII 275 (290)
T ss_pred HHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhee
Confidence 555555555555555777888888888778888888888887777788999999999999987754
No 41
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.89 E-value=4.8e-09 Score=83.99 Aligned_cols=105 Identities=14% Similarity=0.128 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHccCCC-C-CCCcccchh-HHHHHHHHHH-HHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHH
Q 016521 98 FIHYAVSWALMAVLNAFALLP-A-SPPAKSGLL-SLFTLGFVMS-FSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFI 173 (388)
Q Consensus 98 ~~r~~~a~~~l~~~~~~~~~~-~-~~~~~~~~~-~~~~~~~~~~-~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~ 173 (388)
.+|+..+.+.+..+...+++. . .+..++.++ .....|+... .+..+.++|+++.+ +....+.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 467888877776654433211 1 111122222 3444455544 77889999999999 58889999999999999999
Q ss_pred HhccccchhhHHHHHhhhhheeeeeecccc
Q 016521 174 CYRKRVSVLKVITLTAVSIGVAVATVTDLQ 203 (388)
Q Consensus 174 ~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~ 203 (388)
++|||++++++.+++++++|++++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999998877654
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.78 E-value=1.5e-07 Score=88.63 Aligned_cols=139 Identities=12% Similarity=-0.018 Sum_probs=105.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCccccccc-chhhHHHHHHHHH
Q 016521 204 FSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNW-NFSNTLAILMSAF 282 (388)
Q Consensus 204 ~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 282 (388)
....|.++.+++++.|+...+..|.. .+++|.++..+...++.+.+++............... +...+......++
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~---~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI---YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV 81 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence 34579999999999999999998754 2488999999999998876665543322111100001 2223333334444
Q ss_pred HHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521 283 LGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 283 ~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
.....+.+.++.++++++..+++..+..|++..++++++++|+++..+++|+++.+.|+.+..
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 444556677889999999999999999999999999999999999999999999999998754
No 43
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.69 E-value=6.3e-07 Score=82.51 Aligned_cols=124 Identities=13% Similarity=0.027 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHH-HHHHHhhhhhh
Q 016521 69 FNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFV-MSFSTGLANVS 147 (388)
Q Consensus 69 ~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a 147 (388)
...+++....+..|...++.+.+ +..+..+++.++.+++.++......+. ..+.+.....+..+++ ......+++++
T Consensus 135 ~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a 212 (260)
T TIGR00950 135 GSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGPNP-QALSLQWGALLYLGLIGTALAYFLWNKG 212 (260)
T ss_pred HHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555567778877664433 455666788888887776654433222 2222232234444444 45677889999
Q ss_pred hhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhhe
Q 016521 148 LKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGV 194 (388)
Q Consensus 148 l~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv 194 (388)
+++.+++..+++.++.|++.+++++++++|+++..++.|++++++|+
T Consensus 213 ~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 213 LTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999986
No 44
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.67 E-value=5.6e-07 Score=82.81 Aligned_cols=136 Identities=10% Similarity=0.007 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcc--cccc-cch-hhHHHHHHHHH
Q 016521 207 FGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGV--LSFN-WNF-SNTLAILMSAF 282 (388)
Q Consensus 207 ~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~--~~~~-~~~-~~~~~l~~~~~ 282 (388)
.|.++.++++++|+...+..|.. . +++|.++.++-..++.+.+++.......... .... .+. ..+..+...++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 48889999999999999998873 2 4899999999999887776554433221100 0001 111 12334556666
Q ss_pred HHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521 283 LGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 283 ~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
+......+.++.++++++..+++..+..|+++.++++++++|+++..+++|+++.++|+.+-.
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 655666677889999999999999999999999999999999999999999999999987643
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.59 E-value=1.2e-06 Score=81.90 Aligned_cols=133 Identities=11% Similarity=0.031 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH
Q 016521 209 ACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQ 288 (388)
Q Consensus 209 ~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 288 (388)
+++.+++++++|.+.+..|+..+++ ++. ..+....+.+.++++.........+. ..+...+..+..+++......
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE--PDF--LWWALLAHSVLLTPYGLWYLAQVGWS-RLPATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch--hHH--HHHHHHHHHHHHHHHHHHhcccCCCC-CcchhhHHHHHHHHHHHHHHH
Confidence 5688999999999999999776542 232 34444555555555443321111111 011223445556666666667
Q ss_pred HHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 289 WSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 289 ~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
.+.+...++.++...+++.+..|+++.+++++++||+++..+++|+++++.|+++-..
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 7778889999999999999999999999999999999999999999999999977543
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.42 E-value=5.7e-06 Score=79.62 Aligned_cols=137 Identities=11% Similarity=0.129 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 016521 208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLL 287 (388)
Q Consensus 208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 287 (388)
-.+..++.-++|+.+.++.|...+ ..++|..+..+-..++.++++++....+...... ..+...+..+.+.+++++..
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~-~~~~~~~~~l~l~g~~g~~~ 91 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLP-PLSVSILSKIGLLGFLGSMY 91 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHHHHHH
Confidence 345566777899999999998885 4689999999988888888777765443211101 11233455566666666555
Q ss_pred HHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhh------cCCCccccchhhhHHHHHHHHHHHh
Q 016521 288 QWSGALALGATSAISHVVLGQFKTCIILLGNYYI------FGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 288 ~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~------~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
+...+..+++++|..++++.+..|+++.++++++ ++|+++..+++|+++.++|+.+-..
T Consensus 92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 5567788999999999999999999999999999 6999999999999999999987553
No 47
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.24 E-value=1.4e-05 Score=63.54 Aligned_cols=64 Identities=14% Similarity=0.033 Sum_probs=58.2
Q ss_pred HHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521 135 FVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT 198 (388)
Q Consensus 135 ~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~ 198 (388)
+.++.+..+...+++..|+|.+..+-++.++++++++++++|||++++++++++++++|+.++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4466677888899999999999999999999999999999999999999999999999987653
No 48
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.21 E-value=2.7e-05 Score=70.65 Aligned_cols=140 Identities=14% Similarity=0.055 Sum_probs=106.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcc-cccccchhhHHHHHHHHHH
Q 016521 205 SLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGV-LSFNWNFSNTLAILMSAFL 283 (388)
Q Consensus 205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~ 283 (388)
+..|+++++.+-+.|+.--.+.|.+. +.++.+...+-...+.++.+.+..+...... .+..-++..+..+..+++.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 45799999999999999888888765 4678899999988888877666555433221 1111223344444444443
Q ss_pred HHHHHHHHH-HHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521 284 GFLLQWSGA-LALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN 348 (388)
Q Consensus 284 ~~~~~~~~~-~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~ 348 (388)
- ..|+..| |.+.+-....+|.-.+++|.+.+++|.++++|+++..|++..+++.+|+..-.+..
T Consensus 82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 3 3466555 78999999999999999999999999999999999999999999999998766653
No 49
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.20 E-value=6.4e-05 Score=72.41 Aligned_cols=138 Identities=7% Similarity=-0.023 Sum_probs=103.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-HHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHH
Q 016521 205 SLFGACVALAWIVPSAVNKILWSNLQQRESWT-ALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFL 283 (388)
Q Consensus 205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 283 (388)
++.-.++++.+-.+...+.+..|..... .+ |+.+..++..++.+...++... ..............+..++..|++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~ 123 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLC 123 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 4555667777777778888888888765 56 9999999998886654444321 111111111012245566677777
Q ss_pred HHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521 284 GFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 284 ~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
........+..++.+++..++++-...|++++++++++++|+++..+++|++++++|+.+-.
T Consensus 124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 76666666778899999999999999999999999999999999999999999999998755
No 50
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.18 E-value=5.8e-05 Score=63.48 Aligned_cols=126 Identities=15% Similarity=0.174 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHhhc-----cCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC-----CCc------c-cchhHHHHHH
Q 016521 72 VVAVSIIFMNKWVLKN-----IGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS-----PPA------K-SGLLSLFTLG 134 (388)
Q Consensus 72 ~~s~~~~~~nK~~~~~-----~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~-----~~~------~-~~~~~~~~~~ 134 (388)
+....-.++.|..+++ .+.+ |..+..+....+.+++.+.....+.+.. ... . +....++..+
T Consensus 10 ~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
T PF03151_consen 10 LFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSG 88 (153)
T ss_pred HHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHH
Confidence 3334445566666666 5677 8888888888888877766443322221 000 1 1122255666
Q ss_pred HHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521 135 FVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT 198 (388)
Q Consensus 135 ~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~ 198 (388)
+.....+...++.++++++-+++++.....+++.++++++++|+++..++.|++++++|+.+-+
T Consensus 89 ~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 89 LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 7777778888999999999999999999999999999999999999999999999999987654
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.12 E-value=4.7e-05 Score=71.62 Aligned_cols=69 Identities=13% Similarity=0.043 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521 130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT 198 (388)
Q Consensus 130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~ 198 (388)
++..++..++...++++++++.+++..++..+..|++.+++++++++|+++..+++|.++++.|+.+..
T Consensus 218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 444455556678899999999999999999999999999999999999999999999999999986654
No 52
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.10 E-value=3.3e-05 Score=72.45 Aligned_cols=64 Identities=8% Similarity=0.096 Sum_probs=57.3
Q ss_pred HHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521 136 VMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV 199 (388)
Q Consensus 136 ~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~ 199 (388)
.++++..++..|+.+.|.+..+-+.+...++.++++.+++|||++++++.|++++++|..++..
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 3556667888999999999999999999999999999999999999999999999999876543
No 53
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.10 E-value=0.00012 Score=69.05 Aligned_cols=130 Identities=8% Similarity=0.001 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHH
Q 016521 211 VALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWS 290 (388)
Q Consensus 211 ~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 290 (388)
+.+.+-.+...++++.|...+.. ..|..+...+..++.+.+.+... ...... ...+...+..+...|++.......
T Consensus 6 ~~~~w~~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 6 LFGLWYFLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS-SGLPKR--LKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH-hCCCCC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33444455556667778777542 45788888887776655444311 111111 122344566666666666555666
Q ss_pred HHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521 291 GALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY 344 (388)
Q Consensus 291 ~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly 344 (388)
.+..++++++..++++....|+++.++++++++|+++..+++|.+++++|+.+.
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~ 135 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA 135 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence 778899999999999999999999999999999999999999999999999764
No 54
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.10 E-value=7e-05 Score=70.36 Aligned_cols=122 Identities=10% Similarity=0.044 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHH-HHHHHhhhhhhhhc
Q 016521 72 VVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFV-MSFSTGLANVSLKY 150 (388)
Q Consensus 72 ~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~ 150 (388)
+++....+..|...++ .+ |...+ +...++.+++.++...... ....+.......+..+++ ..+...++++++++
T Consensus 158 ~~~a~~~v~~r~~~~~--~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~ 232 (293)
T PRK10532 158 ACWAIYILSGQRAGAE--HG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTR 232 (293)
T ss_pred HHHHHHHHHHHHHhcc--CC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334445556666554 34 55554 4445555555444333221 111122221123344444 45567789999999
Q ss_pred chhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521 151 NSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT 198 (388)
Q Consensus 151 ~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~ 198 (388)
++++.+++..++.|++.+++++++++|+++..+++|.+++++|+....
T Consensus 233 ~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 233 LPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred cChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998876653
No 55
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.05 E-value=4e-05 Score=61.19 Aligned_cols=74 Identities=14% Similarity=0.203 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521 274 TLAILMSAFLGF-LLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN 348 (388)
Q Consensus 274 ~~~l~~~~~~~~-~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~ 348 (388)
+..++..|+++. ..+...++..++.++ .+++...+.|+++.++++++++|+++..+++|.+++++|+.+-.+.+
T Consensus 34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 34 WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 444455555554 445556678888885 77789999999999999999999999999999999999999877654
No 56
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.04 E-value=8.8e-05 Score=69.64 Aligned_cols=107 Identities=12% Similarity=0.045 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCC-CCCcccchhHHHHHHHH-HHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHH
Q 016521 93 PIFLSFIHYAVSWALMAVLNAFALLPA-SPPAKSGLLSLFTLGFV-MSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLA 170 (388)
Q Consensus 93 p~~l~~~r~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~ 170 (388)
+...+.+++.++..++.++......+. ..++.+....+...+++ ......++++++++.+++..+++....|++.+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~ 256 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLL 256 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 456678888888777766544332211 11122222234444443 4566789999999999999999999999999999
Q ss_pred HHHHhccccchhhHHHHHhhhhheeeeee
Q 016521 171 EFICYRKRVSVLKVITLTAVSIGVAVATV 199 (388)
Q Consensus 171 ~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~ 199 (388)
+++++||+++..++.|.++++.|+.+...
T Consensus 257 ~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 257 GTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999877644
No 57
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.94 E-value=0.00036 Score=56.87 Aligned_cols=118 Identities=15% Similarity=0.147 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHH
Q 016521 207 FGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFL 286 (388)
Q Consensus 207 ~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 286 (388)
.|.++.+.+.++.+...++.|+-.++.. ..+... ... ..... .. ++ ...++.++.++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g--~~~~~~-----~~~-~~~~~-~~----------~p---~~~i~lgl~~~~ 59 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP--LLSHAW-----DFI-AALLA-FG----------LA---LRAVLLGLAGYA 59 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC--Cccchh-----HHH-HHHHH-Hh----------cc---HHHHHHHHHHHH
Confidence 3778888888888888888886654432 111000 000 00000 00 11 113344444444
Q ss_pred HHH-HHHHHhccCchhhHHHhhhhhHHHHHHHHHh--hcCCCccccchhhhHHHHHHHHHHHh
Q 016521 287 LQW-SGALALGATSAISHVVLGQFKTCIILLGNYY--IFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 287 ~~~-~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l--~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
..+ .....+++.++..+.....+.++...+.++. +|||++|+.+++|++++++|+.+.+.
T Consensus 60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 443 4456889999999998888888777777774 89999999999999999999988653
No 58
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.88 E-value=0.00028 Score=66.42 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=59.9
Q ss_pred HHHHHHH-HHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521 130 LFTLGFV-MSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV 199 (388)
Q Consensus 130 ~~~~~~~-~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~ 199 (388)
++..+++ ..+...+++.++++.+++..+++....|++.+++++++++|+++..+++|.+++++|+.+...
T Consensus 217 l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 217 LMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 4444443 455677889999999999999999999999999999999999999999999999999876543
No 59
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.87 E-value=0.0053 Score=58.38 Aligned_cols=218 Identities=12% Similarity=-0.005 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhcccc---c----hhhHHHHHhhhhheeeeee
Q 016521 128 LSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRV---S----VLKVITLTAVSIGVAVATV 199 (388)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~---~----~~~~~~l~l~~~Gv~l~~~ 199 (388)
...+..|++.+..+.++..+.+++.+|...-+. ..+.++..++..++++|=. + ..-.++++++++|+++...
T Consensus 74 ~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 74 LPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 336667888888888999999998887776544 3455667788888887532 2 2346788899999988776
Q ss_pred ----ccc---------cccHHHHHHHHHHHHHHHHHH-------HHHHHhhhccCCCHHHHHHHHhH---HHHHHHHHHH
Q 016521 200 ----TDL---------QFSLFGACVALAWIVPSAVNK-------ILWSNLQQRESWTALALMWKTTP---ITLLFLGSLI 256 (388)
Q Consensus 200 ----~~~---------~~~~~G~~~~l~a~~~~a~~~-------i~~~~~~~~~~~~~~~l~~~~~~---~~~~~l~~~~ 256 (388)
.|. .....|+++++.+.+.++.|. ...+... ....++.....-+.. .+.+..-...
T Consensus 154 Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~ 232 (345)
T PRK13499 154 AGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGF 232 (345)
T ss_pred hhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 332 123689999999999999999 3332221 123445443333332 2332222111
Q ss_pred Hh----c-CCCc-ccccccc----hhhHHHHHHHHHHHHHHHHHHHHHhccCchhh----HHHhhhhhHHHHHHHHHhhc
Q 016521 257 PC----L-DPPG-VLSFNWN----FSNTLAILMSAFLGFLLQWSGALALGATSAIS----HVVLGQFKTCIILLGNYYIF 322 (388)
Q Consensus 257 ~~----~-~~~~-~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~----~sv~~~l~~v~~~~~~~l~~ 322 (388)
.. . +... ..+...+ ..+...-.+.|+..+..++.....-++.+... ..+...+.-+++.+.|. ++
T Consensus 233 ~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~l 311 (345)
T PRK13499 233 CFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VL 311 (345)
T ss_pred HHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hh
Confidence 11 1 1111 1111111 12333334555555555555544444443332 22444666688889998 59
Q ss_pred CCCcc------ccchhhhHHHHHHHHHHHhh
Q 016521 323 GANPG------TTSICGAFVAIVGMSFYTYL 347 (388)
Q Consensus 323 ge~~t------~~~i~G~~li~~Gv~ly~~~ 347 (388)
+|.=+ ...++|.++++.|..+-.+.
T Consensus 312 kE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 312 KEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 99877 57789999999998775543
No 60
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.73 E-value=0.00033 Score=65.66 Aligned_cols=130 Identities=15% Similarity=0.091 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 016521 208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLL 287 (388)
Q Consensus 208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 287 (388)
|+++++.++++|+...+..|+.. +.++.+... ..++...+.........+.. .....+..-..+|+.....
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~~~----~~~~~~~~g~l~G~~w~ig 72 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLPEF----WALSIFLVGLLSGAFWALG 72 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCCcc----cccHHHHHHHHHHHHHHhh
Confidence 67899999999999999988764 345555442 23333333332222222211 1233344455666666677
Q ss_pred HHHHHHHhccCchhhHHHhhh-hhHHHHHHHHHhhcCCCccccc----hhhhHHHHHHHHHHHh
Q 016521 288 QWSGALALGATSAISHVVLGQ-FKTCIILLGNYYIFGANPGTTS----ICGAFVAIVGMSFYTY 346 (388)
Q Consensus 288 ~~~~~~~i~~~~a~~~sv~~~-l~~v~~~~~~~l~~ge~~t~~~----i~G~~li~~Gv~ly~~ 346 (388)
+++++..+++++...+..+.+ +.++...+++.++|+|..+..+ ++|.++++.|+.+...
T Consensus 73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~ 136 (290)
T TIGR00776 73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSR 136 (290)
T ss_pred hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEe
Confidence 888899999999999877777 8888999999999999999999 9999999999977643
No 61
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.60 E-value=0.0014 Score=61.89 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhhhccCCC--HHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 016521 218 PSAVNKILWSNLQQRESWT--ALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALAL 295 (388)
Q Consensus 218 ~~a~~~i~~~~~~~~~~~~--~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i 295 (388)
++..+.+.++++.++.... +..+++.|.....+...+......... .+...+.-....+++..+........+
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~al 85 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-----SRKIPLKKYAILSFLFFLASVLSNAAL 85 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-----CCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446778888887666555 777777777766655444433332111 111123333444555556666777889
Q ss_pred ccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521 296 GATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL 349 (388)
Q Consensus 296 ~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~ 349 (388)
++.+..+..+.-..+++.++++++++++++.+..++++.+++.+|++.....+.
T Consensus 86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~ 139 (303)
T PF08449_consen 86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDS 139 (303)
T ss_pred HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccc
Confidence 999999999999999999999999999999999999999999999999876543
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.53 E-value=0.00026 Score=57.65 Aligned_cols=67 Identities=13% Similarity=0.088 Sum_probs=57.9
Q ss_pred HHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHH--HhccccchhhHHHHHhhhhheeeeeec
Q 016521 134 GFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFI--CYRKRVSVLKVITLTAVSIGVAVATVT 200 (388)
Q Consensus 134 ~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~--~l~e~~~~~~~~~l~l~~~Gv~l~~~~ 200 (388)
-++++++..+++.+++..+++.+.-+.+..+.++++.++. ++||++++.+++|++++++|+.++..+
T Consensus 55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 3456677889999999999999999988888788887774 899999999999999999999887653
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.51 E-value=0.00065 Score=53.94 Aligned_cols=54 Identities=13% Similarity=0.113 Sum_probs=49.0
Q ss_pred HHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521 291 GALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY 344 (388)
Q Consensus 291 ~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly 344 (388)
....+++.+...+.....+.++.+.++|+++|||++++.+++|++++++|+.+-
T Consensus 54 ~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 54 WLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 345788999999988888999999999999999999999999999999999764
No 64
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.50 E-value=0.0047 Score=57.21 Aligned_cols=138 Identities=20% Similarity=0.103 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHH
Q 016521 206 LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGF 285 (388)
Q Consensus 206 ~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (388)
..+....+.+.+.|+......+...+. ..++............+...+... .+......... ..+..++..++...
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~ 81 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLL-LEPRGLRPALR--PWLLLLLLALLGLA 81 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHH-hhccccccccc--chHHHHHHHHHHHH
Confidence 456677777778888888887766543 234445444444444444222221 11100111111 12334444444555
Q ss_pred HHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHH-hhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521 286 LLQWSGALALGATSAISHVVLGQFKTCIILLGNY-YIFGANPGTTSICGAFVAIVGMSFYTYL 347 (388)
Q Consensus 286 ~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~-l~~ge~~t~~~i~G~~li~~Gv~ly~~~ 347 (388)
......+..++++++..+++.....|++..++++ ++++|+++..++.|..+.+.|+.+-...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~ 144 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLG 144 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecC
Confidence 5556667789999999999999999999999997 7779999999999999999999886543
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.43 E-value=0.0036 Score=59.43 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521 273 NTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN 348 (388)
Q Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~ 348 (388)
.|+.-++.+++-...++......++++.+.++++.+...+++.++++++++++.++.+++|++++++|+.+-....
T Consensus 78 ~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 78 PWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 3444455578888889999999999999999999999999999999999999999999999999999998765543
No 66
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.36 E-value=0.0034 Score=57.94 Aligned_cols=65 Identities=5% Similarity=0.080 Sum_probs=58.7
Q ss_pred HHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521 135 FVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV 199 (388)
Q Consensus 135 ~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~ 199 (388)
+.+.++...++.|+.|.|.+..+-+.+++.++.++++..+++||+++...+|++++++|-.++..
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 34667777889999999999999999999999999999999999999999999999999876654
No 67
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.35 E-value=0.0007 Score=54.21 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeec
Q 016521 132 TLGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT 200 (388)
Q Consensus 132 ~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~ 200 (388)
...++++.+..+...+++++|++.+..+- ....+.+++.+++++||++++.+++++.++++|+.++...
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 34555667777888999999999887774 5677888999999999999999999999999999877543
No 68
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.26 E-value=0.0095 Score=49.20 Aligned_cols=130 Identities=16% Similarity=0.144 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH
Q 016521 209 ACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQ 288 (388)
Q Consensus 209 ~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 288 (388)
.++++.+.+.-+++..+..++.++.. +|+.........+.+.+.....+.+.+... ......|+. ..+|+++...-
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~~--~~~~~p~w~-~lGG~lG~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSLA--SLSSVPWWA-YLGGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhcccccc--hhccCChHH-hccHHHHHHHH
Confidence 56777888888888888888776543 588888777777777766666555543221 112222333 34777777777
Q ss_pred HHHHHHhccCchhhHHHhhhhhHHH-HHHHHHh-hc---CCCccccchhhhHHHHHHHH
Q 016521 289 WSGALALGATSAISHVVLGQFKTCI-ILLGNYY-IF---GANPGTTSICGAFVAIVGMS 342 (388)
Q Consensus 289 ~~~~~~i~~~~a~~~sv~~~l~~v~-~~~~~~l-~~---ge~~t~~~i~G~~li~~Gv~ 342 (388)
.+....+.+.++.........-.++ +.+++.+ .| .+++++.+++|.++++.|+.
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 7777888999999988877666644 4566665 33 46789999999999999985
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.21 E-value=0.0011 Score=52.25 Aligned_cols=67 Identities=18% Similarity=0.144 Sum_probs=55.4
Q ss_pred HHHHHHHHHhhhhhhhhcchhhHHHHHHH-hHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521 133 LGFVMSFSTGLANVSLKYNSVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV 199 (388)
Q Consensus 133 ~~~~~~~~~~~~~~al~~~s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~ 199 (388)
..++++.+..+...+++.+|++.+..+-. ...+.+++.+++++||++++.+++++.++++|+.++..
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34455666677788999999999887743 56677889999999999999999999999999987754
No 70
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.05 E-value=0.00018 Score=63.64 Aligned_cols=212 Identities=14% Similarity=0.086 Sum_probs=139.3
Q ss_pred ccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHHH-hHHHHHHHHHHHHhccccchhh----HHHHHhhhhheeeee
Q 016521 124 KSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLK----VITLTAVSIGVAVAT 198 (388)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~----~~~l~l~~~Gv~l~~ 198 (388)
.+....-+..|.+.+.....+.-|.+++.+|.+.-+.. ++.+-+.+++.+.++|=.+..+ ..++++++.|+.+-+
T Consensus 56 ~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs 135 (288)
T COG4975 56 LTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTS 135 (288)
T ss_pred hhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEee
Confidence 33333355667777888888888999988887765543 3444566889999998666665 467889999999998
Q ss_pred ecccc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccc
Q 016521 199 VTDLQ--------FSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWN 270 (388)
Q Consensus 199 ~~~~~--------~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 270 (388)
.+|.+ +.-.|+...+.+.+.|..|.+..+.. +.+-++...-|+.-.++..+.+....++.. .+
T Consensus 136 ~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~~~-----~~ 206 (288)
T COG4975 136 KQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKMEKR-----FN 206 (288)
T ss_pred eeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhcccccc-----hH
Confidence 87631 22468888888999999998875543 355666655555444433333332222111 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccc----hhhhHHHHHHHHHHH
Q 016521 271 FSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTS----ICGAFVAIVGMSFYT 345 (388)
Q Consensus 271 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~----i~G~~li~~Gv~ly~ 345 (388)
...+.-...|+.....|...+..-++.+..+.=.+..+--+++.+-|.++++|+=|..+ ++|+++++.|..+..
T Consensus 207 -K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 207 -KYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred -HHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 22333345556666667666666556555554445556668888999999999988765 467777777765543
No 71
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.04 E-value=0.0023 Score=50.30 Aligned_cols=65 Identities=11% Similarity=-0.024 Sum_probs=52.6
Q ss_pred HHHHHHHHHhhhhhhhhcchhhHHHHHHH-hHHHHHHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521 133 LGFVMSFSTGLANVSLKYNSVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVA 197 (388)
Q Consensus 133 ~~~~~~~~~~~~~~al~~~s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~ 197 (388)
..+.++.+..+...+++++|++.+-.+-. .....+++.+++++||++++.+++++.+++.|+...
T Consensus 41 ~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 41 SLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 34455666677778999999998766643 455678889999999999999999999999998764
No 72
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.03 E-value=0.0022 Score=49.77 Aligned_cols=66 Identities=17% Similarity=0.107 Sum_probs=52.8
Q ss_pred HHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521 133 LGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT 198 (388)
Q Consensus 133 ~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~ 198 (388)
.-+++..+..+...|+|++|++.+-.+- ..-...+++.+++++||+.+..+++++.++++|+....
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 3445566667778899999998876554 34455678899999999999999999999999987654
No 73
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.02 E-value=0.0028 Score=49.54 Aligned_cols=65 Identities=14% Similarity=0.094 Sum_probs=53.2
Q ss_pred HHHHHHHHhhhhhhhhcchhhHHHHHHH-hHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521 134 GFVMSFSTGLANVSLKYNSVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT 198 (388)
Q Consensus 134 ~~~~~~~~~~~~~al~~~s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~ 198 (388)
.++++.+..+...+++.+|++.+-.+-. .....+++.+++++||++++.+++++.++++|+....
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 4455666677778999999988766554 5566788999999999999999999999999997764
No 74
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.92 E-value=0.0034 Score=57.20 Aligned_cols=76 Identities=17% Similarity=0.145 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521 273 NTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN 348 (388)
Q Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~ 348 (388)
......+-+++-...+...|..+++.+|.+.+++...|.+.+.++++++++.+++..||++..+.++|+.+.....
T Consensus 16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence 3455556666666677788889999999999999999999999999999999999999999999999998865433
No 75
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.70 E-value=0.014 Score=46.79 Aligned_cols=54 Identities=13% Similarity=0.135 Sum_probs=42.5
Q ss_pred HHhccCchhhH-HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 293 LALGATSAISH-VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 293 ~~i~~~~a~~~-sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
..+++.+...+ ++..-+..+.+++.|+++|||++++.+++|+.+++.|+..-+.
T Consensus 49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 34566554443 4445577888899999999999999999999999999987643
No 76
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.62 E-value=0.029 Score=50.24 Aligned_cols=121 Identities=12% Similarity=0.052 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHh-hccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHH-HHHHHhhhhhh
Q 016521 70 NFVVAVSIIFMNKWVL-KNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFV-MSFSTGLANVS 147 (388)
Q Consensus 70 ~~~~s~~~~~~nK~~~-~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a 147 (388)
.-.++...++..|.+- ..+| + .=+..-++++.++..++-....-+.. ..+......+..+++ -++...+...+
T Consensus 156 AG~~Wa~YIv~G~r~g~~~~g---~-~g~a~gm~vAaviv~Pig~~~ag~~l-~~p~ll~laLgvavlSSalPYsLEmiA 230 (292)
T COG5006 156 AGACWALYIVLGQRAGRAEHG---T-AGVAVGMLVAALIVLPIGAAQAGPAL-FSPSLLPLALGVAVLSSALPYSLEMIA 230 (292)
T ss_pred HhHHHHHHHHHcchhcccCCC---c-hHHHHHHHHHHHHHhhhhhhhcchhh-cChHHHHHHHHHHHHhcccchHHHHHH
Confidence 3455555555555544 2222 2 23355677777777666433221110 011111112222322 23456788889
Q ss_pred hhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhhee
Q 016521 148 LKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVA 195 (388)
Q Consensus 148 l~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~ 195 (388)
+...|...+.++.+..|.+.++.++++++|+++..||+++..++.+.+
T Consensus 231 L~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 231 LRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998877654
No 77
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.60 E-value=0.015 Score=45.86 Aligned_cols=54 Identities=15% Similarity=0.181 Sum_probs=42.6
Q ss_pred HHhccCchhhH-HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 293 LALGATSAISH-VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 293 ~~i~~~~a~~~-sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
..+++.+...+ ++..-+..+.+++.|+++|||++++.+++|+.+++.|+..-+.
T Consensus 49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34555554433 4445577788899999999999999999999999999988653
No 78
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.59 E-value=0.053 Score=49.71 Aligned_cols=68 Identities=13% Similarity=0.092 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHH----HHHhhhhhee
Q 016521 128 LSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVI----TLTAVSIGVA 195 (388)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~----~l~l~~~Gv~ 195 (388)
+.-+..|+.++..+.++..|-+.+.++.+-.+..+.+++..+.+.+++||+=+++++. +++++++|..
T Consensus 196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 4445678999999999999999999999999999999999999999999988888754 4455555543
No 79
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.56 E-value=0.046 Score=43.04 Aligned_cols=52 Identities=17% Similarity=0.309 Sum_probs=42.5
Q ss_pred HHhccCchh-hHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521 293 LALGATSAI-SHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY 344 (388)
Q Consensus 293 ~~i~~~~a~-~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly 344 (388)
..+++.+.. .+++..-+..+.+.+.|+++|||++++.+++|+.+++.|+...
T Consensus 54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 345655543 3466667778889999999999999999999999999999774
No 80
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.50 E-value=0.027 Score=53.66 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=88.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHh----cCCCcccc-c-ccchhhHHHHH
Q 016521 205 SLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPC----LDPPGVLS-F-NWNFSNTLAIL 278 (388)
Q Consensus 205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~----~~~~~~~~-~-~~~~~~~~~l~ 278 (388)
...|+++++++++|++.+.+-+|+ . +-.+++..+. ..+. +..++.++ +..+...+ . +.+...+..-.
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~---k~w~wE~~W~--v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~ 77 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-V---KKWSWETMWS--VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF 77 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-c---CCCchhHHHH--HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence 357999999999999998887665 2 2345555432 2222 11111121 11122111 1 24555666777
Q ss_pred HHHHHHHHHHHHHHHHhccCchhhH-HHhhhhhHHHHHHHHHhhcCCCc---c----ccchhhhHHHHHHHHHHHhhh
Q 016521 279 MSAFLGFLLQWSGALALGATSAISH-VVLGQFKTCIILLGNYYIFGANP---G----TTSICGAFVAIVGMSFYTYLN 348 (388)
Q Consensus 279 ~~~~~~~~~~~~~~~~i~~~~a~~~-sv~~~l~~v~~~~~~~l~~ge~~---t----~~~i~G~~li~~Gv~ly~~~~ 348 (388)
++|++....+..++..+++.+.... .+..-+..+.+.+++.+++||-. + ...++|.+++++|+.+-.+.-
T Consensus 78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 7888888888888888887776544 34455677888999999999643 2 357889999999998877643
No 81
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.44 E-value=0.011 Score=45.32 Aligned_cols=56 Identities=11% Similarity=0.064 Sum_probs=32.4
Q ss_pred HHHHHHHhhhhhhhhcchhhHHHHH-HHhHHHHHHHHHHHHhccccchhhHHHHHhh
Q 016521 135 FVMSFSTGLANVSLKYNSVGFYQMA-KIAVTPSIVLAEFICYRKRVSVLKVITLTAV 190 (388)
Q Consensus 135 ~~~~~~~~~~~~al~~~s~s~~~il-~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~ 190 (388)
..++.+..+...+++++|++.+-.+ .....+.+++.+.+++||++++.++.++.++
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3566677788899999999988554 4577888999999999999999999998764
No 82
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.37 E-value=0.13 Score=42.46 Aligned_cols=117 Identities=16% Similarity=0.205 Sum_probs=80.3
Q ss_pred HHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHH
Q 016521 78 IFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQ 157 (388)
Q Consensus 78 ~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~ 157 (388)
..+|-.+-+..| + |+.-++..+.++++.+.++....+.+..+..++.|++....|++.+....+.+++...+.++...
T Consensus 17 ~~~N~~L~~~~g-s-~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~ 94 (138)
T PF04657_consen 17 AAFNGQLGKALG-S-PLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNIILVPRLGAALTT 94 (138)
T ss_pred HHHHHHHHHHhC-c-cHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 344444444434 3 78889999999988887665554443333344566666667888888888888898888877776
Q ss_pred HHHHhH-HHHHHHHHHH----HhccccchhhHHHHHhhhhheee
Q 016521 158 MAKIAV-TPSIVLAEFI----CYRKRVSVLKVITLTAVSIGVAV 196 (388)
Q Consensus 158 il~~~~-p~~~~l~~~~----~l~e~~~~~~~~~l~l~~~Gv~l 196 (388)
.+.-+. ....+++..+ .-|+++++.+.+++++.++|+.+
T Consensus 95 ~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 95 ILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 655443 3344556654 34589999999999999999753
No 83
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.37 E-value=0.13 Score=42.80 Aligned_cols=136 Identities=13% Similarity=0.022 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHH
Q 016521 206 LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGF 285 (388)
Q Consensus 206 ~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (388)
+...+.++.+.++..++.-+..++.+..+ +|..........+.+.+..+..+.+....+.. .....|+.+ ..|+++.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a~-~~~~pwW~~-~GG~lGa 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLAA-VASAPWWAW-IGGLLGA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhh-ccCCchHHH-Hccchhh
Confidence 45677888888888888888877776544 57776666666666666555544443322221 112234444 3446665
Q ss_pred HHHHHHHHHhccCchhhHHHhhhhhH-HHHHHHHHhhcC----CCccccchhhhHHHHHHHHHH
Q 016521 286 LLQWSGALALGATSAISHVVLGQFKT-CIILLGNYYIFG----ANPGTTSICGAFVAIVGMSFY 344 (388)
Q Consensus 286 ~~~~~~~~~i~~~~a~~~sv~~~l~~-v~~~~~~~l~~g----e~~t~~~i~G~~li~~Gv~ly 344 (388)
..-........+.++++...+...-. +.+.+++.+=+. .+++...++|++++++|+++.
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 55555566778888877766554444 344555544333 468999999999999996554
No 84
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.27 E-value=0.015 Score=52.99 Aligned_cols=132 Identities=10% Similarity=0.084 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 016521 208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLL 287 (388)
Q Consensus 208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 287 (388)
|.+.++.|+++++.+.+=.|+.. .-|++-..+++.....+.-++...+.+.+.. +..-.++|.+....
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~---~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f---------~p~amlgG~lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD---TGDGFFFQWVMCSGIFLVGLVVNLILGFPPF---------YPWAMLGGALWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc---CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcc---------eeHHHhhhhhhhcC
Confidence 56677888888877666545433 3456555555544333322333333333221 11122344444444
Q ss_pred HHHHHHHhccCch-hhHHHhhhhhHHHHHHHHHh-hcCCCc-----cccchhhhHHHHHHHHHHHhhhccc
Q 016521 288 QWSGALALGATSA-ISHVVLGQFKTCIILLGNYY-IFGANP-----GTTSICGAFVAIVGMSFYTYLNLCN 351 (388)
Q Consensus 288 ~~~~~~~i~~~~a-~~~sv~~~l~~v~~~~~~~l-~~ge~~-----t~~~i~G~~li~~Gv~ly~~~~~~~ 351 (388)
|....-+++..+- +-..+.+..+-+.....|-+ +||++. .+.+++|++++++|..+|...|..+
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 4444444555443 22333444444555554433 666543 5789999999999999998766544
No 85
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.19 E-value=0.025 Score=53.19 Aligned_cols=118 Identities=19% Similarity=0.115 Sum_probs=80.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHH
Q 016521 205 SLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLG 284 (388)
Q Consensus 205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 284 (388)
...|+.+++.++++.+....++|+-..+.+..... +...... .+..+.|+.-......+
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~--------------------~~~~~~~-~l~~~~W~~G~~~~~~g 63 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR--------------------AGSGGRS-YLRRPLWWIGLLLMVLG 63 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--------------------ccchhhH-HHhhHHHHHHHHHHhcc
Confidence 46799999999999999999988765443210000 0000000 01112232222222222
Q ss_pred HHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 285 FLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 285 ~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
. ...+..+...+++..+.++.+.-+++.+++..+++|+++...++|+++++.|..+-..
T Consensus 64 ~---~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 64 E---ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred h---HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 2 3445567888999999999999999999999999999999999999999999976543
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.15 E-value=0.041 Score=43.03 Aligned_cols=52 Identities=8% Similarity=0.103 Sum_probs=42.8
Q ss_pred HhccCch-hhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521 294 ALGATSA-ISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 294 ~i~~~~a-~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
.+++.+. +.+++..-+..+.+.+.|+++|||++++.+++|+.+++.|+..-+
T Consensus 49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 4555443 345667778888999999999999999999999999999998754
No 87
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.10 E-value=0.039 Score=42.85 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=42.5
Q ss_pred HhccCch-hhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 294 ALGATSA-ISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 294 ~i~~~~a-~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
.+++.+- +.+++..-+-.+.+.+.|+++|||++++.+++|+.++++|+...+.
T Consensus 50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 4455443 2346666677788889999999999999999999999999987654
No 88
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.95 E-value=0.23 Score=44.48 Aligned_cols=67 Identities=9% Similarity=0.026 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheee
Q 016521 130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAV 196 (388)
Q Consensus 130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l 196 (388)
.....+..+....+.++.++|.+.....++..+.++++.+++.++++++++..++.|+.+++.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3334445555666788999999999999999999999999999999999999999999999999765
No 89
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=94.99 E-value=0.077 Score=41.91 Aligned_cols=67 Identities=12% Similarity=0.047 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521 130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVA 197 (388)
Q Consensus 130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~ 197 (388)
..+..+-.. +...+++.+...+.|.+.-+. +++-++|++.++++.+|..+++.++|+.++++|+.+.
T Consensus 45 ~ipf~lNq~-GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 45 IIPFLLNQS-GSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHH-HHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 444444333 344567888888888888775 6677788899988777888999999999999999875
No 90
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=94.83 E-value=0.19 Score=44.28 Aligned_cols=127 Identities=13% Similarity=0.135 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCC-----CcccchhHHHHHHHHHHH
Q 016521 65 ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASP-----PAKSGLLSLFTLGFVMSF 139 (388)
Q Consensus 65 ~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 139 (388)
.|+..++..+....+..|...+-.++. -..-.++..+++.+++..+......+... .+......++..|++-..
T Consensus 158 ~Wm~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svg 236 (309)
T COG5070 158 LWMFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVG 236 (309)
T ss_pred EEEehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhh
Confidence 467778888888888888877754566 56677899999999888776544322111 011111225556666555
Q ss_pred HHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhh
Q 016521 140 STGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSI 192 (388)
Q Consensus 140 ~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~ 192 (388)
-..+.-|++.-++...+.++.++.-...++.+.++++++.+..++.++++++.
T Consensus 237 iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfl 289 (309)
T COG5070 237 ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFL 289 (309)
T ss_pred hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHH
Confidence 56678899999999999999998888888888899999999888887766553
No 91
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=94.64 E-value=1.1 Score=42.26 Aligned_cols=71 Identities=15% Similarity=0.087 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521 275 LAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 275 ~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
.-+.+-+++-..-|...|....+.+|.+.++...+|...+.+++.++++++++..||...++.+.|+.+-.
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 34444444444555667888999999999999999999999999999999999999999999999997755
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.06 E-value=0.17 Score=38.63 Aligned_cols=46 Identities=17% Similarity=0.146 Sum_probs=24.7
Q ss_pred HHHhccCchhhH-HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHH
Q 016521 292 ALALGATSAISH-VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVA 337 (388)
Q Consensus 292 ~~~i~~~~a~~~-sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li 337 (388)
...+++.+...+ .+..-+..+.+.+.|+++|||++|+.+++|+.++
T Consensus 47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 346777666555 5556678899999999999999999999999875
No 93
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=93.89 E-value=0.033 Score=50.27 Aligned_cols=68 Identities=15% Similarity=0.185 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521 278 LMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 278 ~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~ 345 (388)
++=|+.++......|+..++.+-.-++++....|+++++++|++++|+.|....+|..+.+.|+.+-.
T Consensus 101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv 168 (346)
T KOG4510|consen 101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV 168 (346)
T ss_pred EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence 34455555555566777888888888999999999999999999999999999999999999997744
No 94
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=93.29 E-value=0.052 Score=48.45 Aligned_cols=129 Identities=12% Similarity=0.043 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 016521 208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLL 287 (388)
Q Consensus 208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 287 (388)
+++++++=++.|+.......+.. -+|.+...-++.-+.++.+.+. ++..|. .+...+..-.++|++..+.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~-~~~~p~-----~T~~~~iv~~isG~~Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVF-LFVSPE-----LTLTIFIVGFISGAFWSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHh-eeecCc-----cchhhHHHHHHhhhHhhhh
Confidence 46778888888887766644433 3466555555544444433333 222221 2344556667888888888
Q ss_pred HHHHHHHhccCchhhHHHhhh-hhHHHHHHHHHhhcCCCccccch----hhhHHHHHHHHHHHh
Q 016521 288 QWSGALALGATSAISHVVLGQ-FKTCIILLGNYYIFGANPGTTSI----CGAFVAIVGMSFYTY 346 (388)
Q Consensus 288 ~~~~~~~i~~~~a~~~sv~~~-l~~v~~~~~~~l~~ge~~t~~~i----~G~~li~~Gv~ly~~ 346 (388)
+..+|..++..+...+..+.+ .+.+-+.++|++.|||-.+..++ +.+++++.|+++-.+
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~ 136 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSK 136 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeee
Confidence 888898888777776665443 56677889999999999887664 456677778766544
No 95
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=93.25 E-value=0.13 Score=48.52 Aligned_cols=123 Identities=11% Similarity=0.092 Sum_probs=80.6
Q ss_pred HHHHHHHHHHhh--ccCCChHHHHHHHHHHHHHHHHH-HHHHccCCCCC----CCcccc-hhHHHHHHHHHHHHHhhhhh
Q 016521 75 VSIIFMNKWVLK--NIGFQFPIFLSFIHYAVSWALMA-VLNAFALLPAS----PPAKSG-LLSLFTLGFVMSFSTGLANV 146 (388)
Q Consensus 75 ~~~~~~nK~~~~--~~g~~~p~~l~~~r~~~a~~~l~-~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~ 146 (388)
..-.++.|.++. +..++ ++.+..+.--++...+. ++......+.. ...++. .......+++..+.+...++
T Consensus 176 al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv~~f~~Nls~f~ 254 (316)
T KOG1441|consen 176 ALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSVLAFLLNLSAFL 254 (316)
T ss_pred HHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 333455566663 44566 77777777666666666 54333211111 001111 12233334555556677788
Q ss_pred hhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521 147 SLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT 198 (388)
Q Consensus 147 al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~ 198 (388)
.+..+|+=+++++...--.++...+++++++++++.+.+|..++++|+.+-+
T Consensus 255 ~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 255 VIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 8999999999998877777888889999999999999999999999987643
No 96
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.89 E-value=0.97 Score=43.03 Aligned_cols=123 Identities=15% Similarity=0.173 Sum_probs=82.9
Q ss_pred HHHHHhhcc--CCChHHHHHH---HHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHH-HHHHHHHhhhhhhhhcch
Q 016521 80 MNKWVLKNI--GFQFPIFLSF---IHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLG-FVMSFSTGLANVSLKYNS 152 (388)
Q Consensus 80 ~nK~~~~~~--g~~~p~~l~~---~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~al~~~s 152 (388)
+-|.-..+. +.+.|+++-+ +.+++-+..+.++... ..++++.+...... ++..+ +...++=.++.+|.-.++
T Consensus 265 llk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs 343 (416)
T KOG2765|consen 265 LLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTS 343 (416)
T ss_pred HHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhcc
Confidence 334444433 4665666554 4455555555566666 44444433333333 33333 334455667778888888
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecccc
Q 016521 153 VGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQ 203 (388)
Q Consensus 153 ~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~ 203 (388)
.-..++..+.+.|..++.-.++.++++++..++|.+.+++|.+++...+..
T Consensus 344 ~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~ 394 (416)
T KOG2765|consen 344 PLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN 394 (416)
T ss_pred chhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence 888888888889999999998889999999999999999999888775543
No 97
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.03 E-value=8.3 Score=36.08 Aligned_cols=134 Identities=14% Similarity=0.180 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCH-HHHHHHHhHHHHHHHHHHHHhcCCCcccccccch-hhHHHHHHHHHHHHH
Q 016521 209 ACVALAWIVPSAVNKILWSNLQQRESWTA-LALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNF-SNTLAILMSAFLGFL 286 (388)
Q Consensus 209 ~~~~l~a~~~~a~~~i~~~~~~~~~~~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~ 286 (388)
...++.-+++..+-.+..|.....++.+. +.++.+|+..+++.+...-.. ..-....++|+. ..|. -..++-++
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~---P~~~lf~~ 89 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWF---PVSLLFVG 89 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHc---cHHHHHHH
Confidence 44555556666666777777776666654 455568888877665444321 111111122321 1221 11122223
Q ss_pred HHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 287 LQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 287 ~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
+.+.....+++.+....+++..+.++++.+...+++|..++...+.......+|...+..
T Consensus 90 ~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 90 MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence 333445668999999999999999999999999999999999999999999988876543
No 98
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=90.78 E-value=0.32 Score=38.43 Aligned_cols=54 Identities=13% Similarity=0.126 Sum_probs=41.8
Q ss_pred HHHHHhccCchhhHHHh-hhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHH
Q 016521 290 SGALALGATSAISHVVL-GQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSF 343 (388)
Q Consensus 290 ~~~~~i~~~~a~~~sv~-~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~l 343 (388)
.+++.+++.+-+.+..+ +.+.-+++++.++++.+|..+...++|++++++|+.+
T Consensus 57 ~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 57 LFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34455666665555444 5777899999998888888899999999999999854
No 99
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=90.68 E-value=4.4 Score=38.41 Aligned_cols=140 Identities=11% Similarity=0.057 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHH-HhcCCCccccc--ccchhhHHHHHHHHH
Q 016521 206 LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLI-PCLDPPGVLSF--NWNFSNTLAILMSAF 282 (388)
Q Consensus 206 ~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~~~ 282 (388)
..|+++-.++.++.+.+.+=.||.+ --+|+..+....+-....+|.. ....-|+..+. +.+...+....+.++
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk----~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVK----GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcC----CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 5799999999999888776555443 3456655444333222222322 22233333221 122233333333333
Q ss_pred HHHHHHHHHHHHhccCch-hhHHHhhhhhHHHHHHHHHhhc-------CCCccccchhhhHHHHHHHHHHHhhhc
Q 016521 283 LGFLLQWSGALALGATSA-ISHVVLGQFKTCIILLGNYYIF-------GANPGTTSICGAFVAIVGMSFYTYLNL 349 (388)
Q Consensus 283 ~~~~~~~~~~~~i~~~~a-~~~sv~~~l~~v~~~~~~~l~~-------ge~~t~~~i~G~~li~~Gv~ly~~~~~ 349 (388)
+.-......=..+++++- ...++..-+-.++..++--++. +++-....++|.++++.|+.+..+.-.
T Consensus 82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~ 156 (344)
T PF06379_consen 82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS 156 (344)
T ss_pred HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence 333222222233444442 2223322233333333333332 233345789999999999998877544
No 100
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.33 E-value=4.2 Score=37.77 Aligned_cols=131 Identities=9% Similarity=0.004 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCC-----CcccchhHHHHHHHHH
Q 016521 63 PIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASP-----PAKSGLLSLFTLGFVM 137 (388)
Q Consensus 63 ~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 137 (388)
....+..+.++=.-+.-..+.++.+++.. ++.+.+.-.+...++-............. ..++..+.++..+++.
T Consensus 173 G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~g 251 (327)
T KOG1581|consen 173 GILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCG 251 (327)
T ss_pred hHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhh
Confidence 34455666666656666777888888877 66555544444444333322222111110 1122233377788888
Q ss_pred HHHHhhhhhhhh-cchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhhee
Q 016521 138 SFSTGLANVSLK-YNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVA 195 (388)
Q Consensus 138 ~~~~~~~~~al~-~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~ 195 (388)
+.+..+.+.-++ +-|..+.++.. +-=++..+++.++++.++++.+|.++..++.|+.
T Consensus 252 avGQ~FI~~TI~~FGslt~t~I~t-tRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~ 309 (327)
T KOG1581|consen 252 AVGQLFIFYTIERFGSLTFTTIMT-TRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIF 309 (327)
T ss_pred hhhhheehhhHhhcccHHHHHHHH-HHHHHHHHHHHHHhCCccchhhccCeeeehHHHH
Confidence 888777777765 46777766655 5668889999999999999999999888877753
No 101
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.81 E-value=11 Score=31.34 Aligned_cols=105 Identities=12% Similarity=0.146 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcc-CCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHH-HHHHhHHHHHHHH
Q 016521 93 PIFLSFIHYAVSWALMAVLNAFA-LLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQ-MAKIAVTPSIVLA 170 (388)
Q Consensus 93 p~~l~~~r~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~-il~~~~p~~~~l~ 170 (388)
|+.-++.-+.++..++..+...+ +.+.....++.|++....|++.+.....+......+.++..+ ++.+.+.+.-+++
T Consensus 34 pl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glli 113 (150)
T COG3238 34 PLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLI 113 (150)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHH
Confidence 78888888888887776655443 222222235556665555655444333333344444333333 3333344444444
Q ss_pred HHH-Hh---ccccchhhHHHHHhhhhheeee
Q 016521 171 EFI-CY---RKRVSVLKVITLTAVSIGVAVA 197 (388)
Q Consensus 171 ~~~-~l---~e~~~~~~~~~l~l~~~Gv~l~ 197 (388)
-.+ ++ +++++..+++++++.++|+.+.
T Consensus 114 D~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 114 DHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 322 23 3788999999999999995544
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=86.56 E-value=2.7 Score=37.54 Aligned_cols=58 Identities=16% Similarity=0.197 Sum_probs=49.5
Q ss_pred HHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521 290 SGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL 347 (388)
Q Consensus 290 ~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~ 347 (388)
+...+++..+=-+.-+--..||+-..++|+++.+..-.|....-..+|+.|++++-|.
T Consensus 101 ssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK 158 (337)
T KOG1580|consen 101 SSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYK 158 (337)
T ss_pred hccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcc
Confidence 4455677777667777778999999999999999999999999999999999998764
No 103
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=84.28 E-value=2.3 Score=38.90 Aligned_cols=138 Identities=12% Similarity=0.008 Sum_probs=73.0
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHH-----ccCCCCCCCcccchhH--H
Q 016521 58 QRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNA-----FALLPASPPAKSGLLS--L 130 (388)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~-----~~~~~~~~~~~~~~~~--~ 130 (388)
.++...+..+.+..+.|.-+.+++.-.+++||-+ |-...++--++..+..+.... ++.... .++-..+.. .
T Consensus 160 ~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Flf~~~div~~~~~~~~-se~~~~p~~g~~ 237 (330)
T KOG1583|consen 160 FWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFLFMGDDIVSHWRLAFK-SESYLIPLLGFK 237 (330)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHHHhcchHHHHHHHHhc-CcceeccccCcc
Confidence 4455566677778888888999999999999887 777777776666655444310 000000 000001111 2
Q ss_pred HHHHHHHH-HHHhhhhhhhhcchhhHHH-------HHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521 131 FTLGFVMS-FSTGLANVSLKYNSVGFYQ-------MAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVA 197 (388)
Q Consensus 131 ~~~~~~~~-~~~~~~~~al~~~s~s~~~-------il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~ 197 (388)
+|....+. .+...++.+.+.+..=..- +....-=.+..+++.+.++..+++..|+|.+++++|..+.
T Consensus 238 vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~f 312 (330)
T KOG1583|consen 238 VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLF 312 (330)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHH
Confidence 34443332 2334555555543211110 0000111234556666667777777777777777665443
No 104
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=82.63 E-value=0.53 Score=40.68 Aligned_cols=63 Identities=19% Similarity=0.159 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521 285 FLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL 347 (388)
Q Consensus 285 ~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~ 347 (388)
.+.++.+...+++.+|+.++.+...+..+..+++++++||++....++..++.+.|+....|.
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 345666667889999999999999999999999999999999999999999999999776553
No 105
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=80.85 E-value=16 Score=33.80 Aligned_cols=57 Identities=16% Similarity=0.045 Sum_probs=48.1
Q ss_pred HHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 290 SGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 290 ~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
..|..+..++|+..++.--...+++-+++..+++.+++..||+|+..+.+|+..-.+
T Consensus 102 lm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 102 LMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 344456778888888888788899999999999999999999999999999976443
No 106
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=78.93 E-value=0.63 Score=42.36 Aligned_cols=75 Identities=11% Similarity=0.097 Sum_probs=0.0
Q ss_pred HHHHhccc-cchhhHHHHHhhhhheeeeeecc--ccccHHHHHHHHHHHH-HHHHHHHHHHHhhhccCCCHHHHHHHHhH
Q 016521 171 EFICYRKR-VSVLKVITLTAVSIGVAVATVTD--LQFSLFGACVALAWIV-PSAVNKILWSNLQQRESWTALALMWKTTP 246 (388)
Q Consensus 171 ~~~~l~e~-~~~~~~~~l~l~~~Gv~l~~~~~--~~~~~~G~~~~l~a~~-~~a~~~i~~~~~~~~~~~~~~~l~~~~~~ 246 (388)
-.++||+| +-+.-.++++++++-..+..... .+.-+.|+++.+++++ +-+++..+ .+.+++..+.|+++.+...
T Consensus 68 IImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym--~lLr~~GAs~WtiLaFcLA 145 (381)
T PF05297_consen 68 IIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYM--WLLRELGASFWTILAFCLA 145 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhHHHHHHHHHHH
Confidence 33455544 45556666666665555444322 2344567654443332 22222222 2455566666776655543
Q ss_pred H
Q 016521 247 I 247 (388)
Q Consensus 247 ~ 247 (388)
+
T Consensus 146 F 146 (381)
T PF05297_consen 146 F 146 (381)
T ss_dssp -
T ss_pred H
Confidence 3
No 107
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.49 E-value=0.48 Score=44.14 Aligned_cols=120 Identities=14% Similarity=0.089 Sum_probs=76.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHH
Q 016521 204 FSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFL 283 (388)
Q Consensus 204 ~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 283 (388)
.+..|.++++.+.+..+...++.|+-.++.. ..-.-...+-...- ....|+.-.+.-.+
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~--------------------~~~~ra~~gg~~yl-~~~~Ww~G~ltm~v 76 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAG--------------------ASGLRAGEGGYGYL-KEPLWWAGMLTMIV 76 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHh--------------------hhcccccCCCcchh-hhHHHHHHHHHHHH
Confidence 4567888888888877777777665554311 00011111100100 11233333333333
Q ss_pred HHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521 284 GFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL 347 (388)
Q Consensus 284 ~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~ 347 (388)
+=..+ |......+++-.+.++.+.-+...+++..+++|+++....+|++++++|...-..+
T Consensus 77 Gei~N---FaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 77 GEIAN---FAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HhHhh---HHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 43333 34456678888888899999999999999999999999999999999998655433
No 108
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=73.80 E-value=37 Score=26.38 Aligned_cols=31 Identities=3% Similarity=-0.104 Sum_probs=26.0
Q ss_pred HHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521 167 IVLAEFICYRKRVSVLKVITLTAVSIGVAVA 197 (388)
Q Consensus 167 ~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~ 197 (388)
.+.++.+++||++++....|.+++.+++..+
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3567889999999999999999888777654
No 109
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=73.77 E-value=2.2 Score=39.04 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=48.4
Q ss_pred HHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521 292 ALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY 344 (388)
Q Consensus 292 ~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly 344 (388)
.++++..+.....+--.+.+++++++++++++++-+..-..++.+++.|..+-
T Consensus 120 nlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lG 172 (347)
T KOG1442|consen 120 NLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLG 172 (347)
T ss_pred ceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheec
Confidence 46789999999999999999999999999999999999999999999998664
No 110
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=67.98 E-value=69 Score=28.06 Aligned_cols=24 Identities=4% Similarity=-0.000 Sum_probs=17.8
Q ss_pred HHHHHhhcCCCccccchhhhHHHH
Q 016521 315 LLGNYYIFGANPGTTSICGAFVAI 338 (388)
Q Consensus 315 ~~~~~l~~ge~~t~~~i~G~~li~ 338 (388)
-.+|..++++..=+..++|..+.+
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLv 156 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLV 156 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345777788888788888887765
No 111
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=67.74 E-value=66 Score=26.21 Aligned_cols=31 Identities=16% Similarity=0.290 Sum_probs=16.9
Q ss_pred HHHHHHHHhhcCCCccccchhhhHHHHHHHHH
Q 016521 312 CIILLGNYYIFGANPGTTSICGAFVAIVGMSF 343 (388)
Q Consensus 312 v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~l 343 (388)
.+-+++|.+.+++ -....++|..+.+.|++.
T Consensus 72 lfyif~G~l~~~~-~~~~~i~g~~~~~~G~~~ 102 (136)
T PF08507_consen 72 LFYIFLGTLCLGQ-SILSIIIGLLLFLVGVIY 102 (136)
T ss_pred HHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHH
Confidence 3344455555555 333455677777777643
No 112
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=66.81 E-value=90 Score=27.43 Aligned_cols=16 Identities=19% Similarity=0.283 Sum_probs=9.1
Q ss_pred HHHHHHHHHhccccch
Q 016521 166 SIVLAEFICYRKRVSV 181 (388)
Q Consensus 166 ~~~l~~~~~l~e~~~~ 181 (388)
.+++..++++|+|++-
T Consensus 188 ~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 188 VIAFALRFYLKKKYNI 203 (206)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 3444556667776653
No 113
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=63.68 E-value=34 Score=26.55 Aligned_cols=28 Identities=4% Similarity=-0.047 Sum_probs=24.9
Q ss_pred HHHHHhhcCCCccccchhhhHHHHHHHH
Q 016521 315 LLGNYYIFGANPGTTSICGAFVAIVGMS 342 (388)
Q Consensus 315 ~~~~~l~~ge~~t~~~i~G~~li~~Gv~ 342 (388)
+.+++++++|++++.++.|.++++++++
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~ 104 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVY 104 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhh
Confidence 4678899999999999999999988864
No 114
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=57.48 E-value=2e+02 Score=28.24 Aligned_cols=22 Identities=9% Similarity=0.042 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHhccCchhhH
Q 016521 282 FLGFLLQWSGALALGATSAISH 303 (388)
Q Consensus 282 ~~~~~~~~~~~~~i~~~~a~~~ 303 (388)
..++...+..+..++++...+.
T Consensus 359 ~~~~~~s~i~~~~l~~~~~LRv 380 (399)
T PF00909_consen 359 AWSFVVSYIIFKILKKFGGLRV 380 (399)
T ss_dssp HHHHHHHHHHHHHHHHHT-SB-
T ss_pred HHHHHHHHHHHHHHHhccccCC
Confidence 3344555555666776666554
No 115
>PRK02237 hypothetical protein; Provisional
Probab=56.87 E-value=21 Score=27.88 Aligned_cols=43 Identities=26% Similarity=0.345 Sum_probs=35.7
Q ss_pred HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 304 VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 304 sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
+..+-+--+.+++.++.+-|.+++...++|..++++|+.+-.+
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 4455555677889999999999999999999999999976443
No 116
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.67 E-value=88 Score=23.95 Aligned_cols=31 Identities=6% Similarity=-0.050 Sum_probs=25.9
Q ss_pred HHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521 167 IVLAEFICYRKRVSVLKVITLTAVSIGVAVA 197 (388)
Q Consensus 167 ~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~ 197 (388)
.+.++.+.+||++++..+.+..++..|+.++
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 3557889999999999999999888887654
No 117
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=56.54 E-value=71 Score=29.48 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=39.4
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccc
Q 016521 153 VGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQF 204 (388)
Q Consensus 153 ~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~ 204 (388)
+..+.++...--..+.+++++++.++++-...-+.++++.|+.+-.+.+.+-
T Consensus 286 A~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 286 ALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred hhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence 3344444434456888999999999999999999999999998877766443
No 118
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=55.87 E-value=2.2e+02 Score=28.30 Aligned_cols=50 Identities=10% Similarity=0.066 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCC
Q 016521 206 LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDP 261 (388)
Q Consensus 206 ~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 261 (388)
-.|+++..+ ++....++ ...++.++||++-.......+.+.++.++ +.|+
T Consensus 299 KYgiLFI~L---TF~~fflf--E~~~~~~iHpiQY~LVGlAl~lFYlLLLS-lSEh 348 (430)
T PF06123_consen 299 KYGILFIGL---TFLAFFLF--ELLSKLRIHPIQYLLVGLALVLFYLLLLS-LSEH 348 (430)
T ss_pred HHHHHHHHH---HHHHHHHH--HHHhcCcccHHHHHHHHHHHHHHHHHHHH-HHhh
Confidence 367766655 33333333 23344578998876655555555554444 4454
No 119
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.79 E-value=81 Score=24.14 Aligned_cols=29 Identities=3% Similarity=0.002 Sum_probs=25.6
Q ss_pred HHHHHhhcCCCccccchhhhHHHHHHHHH
Q 016521 315 LLGNYYIFGANPGTTSICGAFVAIVGMSF 343 (388)
Q Consensus 315 ~~~~~l~~ge~~t~~~i~G~~li~~Gv~l 343 (388)
+.++.+.++|++.+.++.|..++++|+.+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999988854
No 120
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=53.39 E-value=20 Score=27.89 Aligned_cols=43 Identities=21% Similarity=0.350 Sum_probs=35.6
Q ss_pred HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 304 VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 304 sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
+..+-+-.+.+++.++.+-|++++...++|..+++.|+..-.+
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 3445555677889999999999999999999999999976543
No 121
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=50.48 E-value=16 Score=34.06 Aligned_cols=64 Identities=8% Similarity=0.024 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHh-----ccCchhhHHHhhhhhHHHHHHHHHhhcCCCcc--ccchhhhHHHHHHHHHHH
Q 016521 277 ILMSAFLGFLLQWSGALAL-----GATSAISHVVLGQFKTCIILLGNYYIFGANPG--TTSICGAFVAIVGMSFYT 345 (388)
Q Consensus 277 l~~~~~~~~~~~~~~~~~i-----~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t--~~~i~G~~li~~Gv~ly~ 345 (388)
-..+|++-.+.+++.-+.+ ..+-|+..++ .-++.+++.|+. +.+.+ ..-+.|.+++++++.+-.
T Consensus 75 A~aGGvvfnlgNillq~aia~aGmSVafpvg~gl----alVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 75 AMAGGVVFNLGNILLQAAIAFAGMSVAFPVGIGL----ALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HHHhhHhhhhHHHHHHHHHHHhcceeeeeeecce----EEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHH
Confidence 3344444444444443333 3444444333 234445555443 44444 356668888877776643
No 122
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=49.73 E-value=1.6e+02 Score=24.89 Aligned_cols=64 Identities=11% Similarity=0.260 Sum_probs=42.7
Q ss_pred HHHHHHhccccchhhHHHHHh-------hhhheeeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016521 169 LAEFICYRKRVSVLKVITLTA-------VSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQR 232 (388)
Q Consensus 169 l~~~~~l~e~~~~~~~~~l~l-------~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~ 232 (388)
+.+.++.|..|+..+.+|+.+ ++.|+++....+...-...+..++.+++.+++-.++..-++++
T Consensus 87 f~Em~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~~~~f~qsv~~gf~a~lGfslvmvlfA~iRER 157 (193)
T COG4657 87 FTEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNINEGHNFLQSVVYGFGAALGFSLVMVLFAAIRER 157 (193)
T ss_pred HHHHHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhhhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHH
Confidence 456667778888888888773 4566666665544433456777777788888777766555543
No 123
>PRK02237 hypothetical protein; Provisional
Probab=46.95 E-value=33 Score=26.75 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=29.1
Q ss_pred HHHHHHHHHhccccchhhHHHHHhhhhheeeeeec
Q 016521 166 SIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT 200 (388)
Q Consensus 166 ~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~ 200 (388)
...+..+.+-|+||+...+.+..++++|+.++.+.
T Consensus 72 ~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 72 GSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 33466788889999999999999999999877543
No 124
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=46.41 E-value=36 Score=26.46 Aligned_cols=35 Identities=17% Similarity=0.162 Sum_probs=29.6
Q ss_pred HHHHHHHHHhccccchhhHHHHHhhhhheeeeeec
Q 016521 166 SIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT 200 (388)
Q Consensus 166 ~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~ 200 (388)
...+..+.+-|+||+...+++..++++|+.++.+.
T Consensus 70 ~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 70 ASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 34566788889999999999999999999887654
No 125
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=45.38 E-value=1.9e+02 Score=29.06 Aligned_cols=24 Identities=17% Similarity=0.134 Sum_probs=19.9
Q ss_pred ccccchhhhHHHHHHHHHHHhhhc
Q 016521 326 PGTTSICGAFVAIVGMSFYTYLNL 349 (388)
Q Consensus 326 ~t~~~i~G~~li~~Gv~ly~~~~~ 349 (388)
++..|++++.++++|+.++.+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 788999999999999877766544
No 126
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=44.01 E-value=3.7e+02 Score=27.47 Aligned_cols=48 Identities=17% Similarity=0.018 Sum_probs=23.1
Q ss_pred ccCchhhHHHhhhhhHHHHHHHHHhhcCCCcc-ccchhhhHHHHHHHHH
Q 016521 296 GATSAISHVVLGQFKTCIILLGNYYIFGANPG-TTSICGAFVAIVGMSF 343 (388)
Q Consensus 296 ~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t-~~~i~G~~li~~Gv~l 343 (388)
.|..+....+..-..++-..+.|.+.=.-.++ ...+.|+++++.+...
T Consensus 342 GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 342 GRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555666666666653222222 2334444444444433
No 127
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=43.85 E-value=3.1e+02 Score=26.57 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=14.5
Q ss_pred HHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHc
Q 016521 80 MNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAF 114 (388)
Q Consensus 80 ~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~ 114 (388)
+++++-+ .++..|.+... ++++.++=.+..+.
T Consensus 236 i~~~l~~-~~~~lP~f~~a--mi~g~ivrn~~~~~ 267 (368)
T PF03616_consen 236 ISALLKK-IGLTLPLFVGA--MIVGIIVRNILDKT 267 (368)
T ss_pred HHHHHHH-cCcCCchHHHH--HHHHHHHHHHHHHh
Confidence 3344333 45666765332 34444443444333
No 128
>PRK11715 inner membrane protein; Provisional
Probab=43.14 E-value=3.5e+02 Score=26.95 Aligned_cols=66 Identities=12% Similarity=0.115 Sum_probs=35.3
Q ss_pred hhhheeeeeeccc-----cccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCC
Q 016521 190 VSIGVAVATVTDL-----QFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDP 261 (388)
Q Consensus 190 ~~~Gv~l~~~~~~-----~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 261 (388)
-.+||-++..-|. ...-.|+++..+ +++...++ ...++.++||++-.......+.+.++.++ +.|+
T Consensus 284 ~~~~V~~~~PVd~Y~~~~RA~KYgiLFI~L---TF~~fFlf--E~~~~~~iHpiQYlLVGlAl~lFYLLLLS-lSEH 354 (436)
T PRK11715 284 PAFGVSLIDPVDQYQKTERAVKYAILFIAL---TFAAFFLF--ELLKKLRIHPVQYLLVGLALVLFYLLLLS-LSEH 354 (436)
T ss_pred ceeEEEEeccccHHHHHHHHHhHHHHHHHH---HHHHHHHH--HHhcCceecHHHHHHHHHHHHHHHHHHHH-HHhh
Confidence 4456655543321 112367766655 44444444 33455678998876665555555555544 4454
No 129
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=41.34 E-value=53 Score=25.44 Aligned_cols=37 Identities=16% Similarity=0.047 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc
Q 016521 165 PSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD 201 (388)
Q Consensus 165 ~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~ 201 (388)
....+..+++-|.++++..|.+.+++++|+.++.++.
T Consensus 70 ~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 70 AASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 3344567777889999999999999999998887653
No 130
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=38.03 E-value=49 Score=25.70 Aligned_cols=55 Identities=13% Similarity=0.101 Sum_probs=36.7
Q ss_pred HHHHHhccCchhhHH-HhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521 290 SGALALGATSAISHV-VLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY 344 (388)
Q Consensus 290 ~~~~~i~~~~a~~~s-v~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly 344 (388)
.+|+.+.+.+-+.+. +.+.+.-.++.+.|..+-.|......++|+.++++|+.+.
T Consensus 68 ly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 68 LYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 344455555443332 3344555777888877655567789999999999999764
No 131
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=37.36 E-value=8 Score=35.10 Aligned_cols=61 Identities=18% Similarity=0.248 Sum_probs=51.5
Q ss_pred HHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521 286 LLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346 (388)
Q Consensus 286 ~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~ 346 (388)
=.|+....+.++++-+....+.+-..++..+++|++++.+-.+.++.|.+++++|+.....
T Consensus 90 EaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~ 150 (336)
T KOG2766|consen 90 EANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVF 150 (336)
T ss_pred cccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEE
Confidence 3344444556888999999999999999999999999999999999999999999976543
No 132
>PRK10666 ammonium transporter; Provisional
Probab=34.71 E-value=4.7e+02 Score=25.99 Aligned_cols=24 Identities=8% Similarity=-0.017 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHhccCchhhHH
Q 016521 281 AFLGFLLQWSGALALGATSAISHV 304 (388)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~~a~~~s 304 (388)
...++...+..+..++++.+.+++
T Consensus 385 ~~~~~~~t~ii~~il~~~~~lRvs 408 (428)
T PRK10666 385 IVWSGVVAFIGYKLADLTVGLRVP 408 (428)
T ss_pred HHHHHHHHHHHHHHHHhcccCcCC
Confidence 333445555556667776665543
No 133
>PRK02935 hypothetical protein; Provisional
Probab=33.07 E-value=1.8e+02 Score=22.58 Aligned_cols=24 Identities=13% Similarity=0.275 Sum_probs=17.6
Q ss_pred cccchhhhHHHHHHHHHHHhhhcc
Q 016521 327 GTTSICGAFVAIVGMSFYTYLNLC 350 (388)
Q Consensus 327 t~~~i~G~~li~~Gv~ly~~~~~~ 350 (388)
+...++|.+.++++..+|-|....
T Consensus 41 ~ifm~~G~l~~l~S~vvYFwiGml 64 (110)
T PRK02935 41 TIFMLLGFLAVIASTVVYFWIGML 64 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344567888888888888887654
No 134
>COG4025 Predicted membrane protein [Function unknown]
Probab=30.93 E-value=4e+02 Score=24.05 Aligned_cols=19 Identities=16% Similarity=0.104 Sum_probs=9.0
Q ss_pred hhHHhhccCcccccCcchH
Q 016521 19 RKILKRKDSDAGERGKALE 37 (388)
Q Consensus 19 ~~~~~~~~~d~~~~~~~~~ 37 (388)
+..++......|+++.+.+
T Consensus 40 ~~k~~~llrtige~~~~ve 58 (284)
T COG4025 40 AMKTEQLLRTIGESASKVE 58 (284)
T ss_pred HHHHHHHHHHhhccHHHHH
Confidence 4444444445555544443
No 135
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=30.52 E-value=4.6e+02 Score=24.57 Aligned_cols=32 Identities=3% Similarity=-0.141 Sum_probs=17.4
Q ss_pred HHHHHhHHHHHHHHHHHHhccccchhhHHHHH
Q 016521 157 QMAKIAVTPSIVLAEFICYRKRVSVLKVITLT 188 (388)
Q Consensus 157 ~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~ 188 (388)
.=+...+|+++.+.-.++.++.-++...++.+
T Consensus 193 ePf~~LT~iv~sfi~~~i~~~~~~R~~lLg~~ 224 (299)
T PF05884_consen 193 EPFIALTPIVSSFIYPLIAGHGTNRQKLLGIV 224 (299)
T ss_pred CcHHHHHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 33444667777666666665533444444433
No 136
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=30.00 E-value=7.3e+02 Score=26.78 Aligned_cols=173 Identities=10% Similarity=0.008 Sum_probs=0.0
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016521 153 VGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQR 232 (388)
Q Consensus 153 ~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~ 232 (388)
.|-+.++..+.|.-++.++...+.+|.+...+.+.+..++|..-+.. ...+..+++.+...++....++..++
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISIQP-------KHSLKYLLLVAVIILLSYVLKNLTDK 82 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhCc-------cchHHHHHHHHHHHHHHHHhhhhhcc
Q ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHh----------ccCchhh
Q 016521 233 ESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALAL----------GATSAIS 302 (388)
Q Consensus 233 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i----------~~~~a~~ 302 (388)
. +........+.+.+....+..+.+. ......+....+=+++++.+.+.....+ ....--.
T Consensus 83 ~---~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~y~~~~~~~e~~l~~~l~~if~~~~~~~~~~~~~~~~~~eei 153 (764)
T TIGR02865 83 K---KTVVPPIVVFLEAAVYAIFGYLQNK------LVTPLDFILSIVEASLSFVLYYIFNYSIPCLKNGRTKHLLTNEEI 153 (764)
T ss_pred c---chhhhhhhhhHHHHHHHHHHHhhCC------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcHhHH
Q ss_pred HHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHH
Q 016521 303 HVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSF 343 (388)
Q Consensus 303 ~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~l 343 (388)
+++...+-.+++-+.++-+++ ++..++++..+++...+.
T Consensus 154 ~s~~il~~~~l~G~~~~~i~~--~sl~~il~~~~vl~~a~~ 192 (764)
T TIGR02865 154 VSLIILIASVLTGLRGLSIWG--LSLENIIARLAVLLISYI 192 (764)
T ss_pred HHHHHHHHHHHHccCCCEEEe--eEHHHHHHHHHHHHHHHh
No 137
>PF14851 FAM176: FAM176 family
Probab=28.17 E-value=87 Score=26.23 Aligned_cols=11 Identities=9% Similarity=0.335 Sum_probs=4.7
Q ss_pred hhHHHHHHHHH
Q 016521 333 GAFVAIVGMSF 343 (388)
Q Consensus 333 G~~li~~Gv~l 343 (388)
|.++.++.+..
T Consensus 33 GLlLtLcllV~ 43 (153)
T PF14851_consen 33 GLLLTLCLLVI 43 (153)
T ss_pred HHHHHHHHHHh
Confidence 44444444433
No 138
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=27.18 E-value=6.2e+02 Score=24.99 Aligned_cols=43 Identities=9% Similarity=0.209 Sum_probs=25.2
Q ss_pred HHhhhhhHHHHHHHHHhhcCCCccccc--hhhhHHHHHHHHHHHh
Q 016521 304 VVLGQFKTCIILLGNYYIFGANPGTTS--ICGAFVAIVGMSFYTY 346 (388)
Q Consensus 304 sv~~~l~~v~~~~~~~l~~ge~~t~~~--i~G~~li~~Gv~ly~~ 346 (388)
++.|.+..+..++--..+=+++-+..- .++.++.+.-+.+|..
T Consensus 158 a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~llC~i~y~~ 202 (406)
T KOG1479|consen 158 ALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVILLLCFVLYLV 202 (406)
T ss_pred hhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHHHHHHHHHH
Confidence 345666666666655555556655443 4455566677777773
No 139
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=26.88 E-value=5.7e+02 Score=25.41 Aligned_cols=17 Identities=12% Similarity=0.110 Sum_probs=8.9
Q ss_pred chhhhHHHHHHHHHHHh
Q 016521 330 SICGAFVAIVGMSFYTY 346 (388)
Q Consensus 330 ~i~G~~li~~Gv~ly~~ 346 (388)
..+++++.++.+..|..
T Consensus 178 F~~a~~v~l~~i~~~~~ 194 (437)
T TIGR00939 178 FGTPCVVQLICIVCYLL 194 (437)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34455555555555543
No 140
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=26.31 E-value=96 Score=21.90 Aligned_cols=21 Identities=29% Similarity=0.346 Sum_probs=15.6
Q ss_pred cchhhhHHHHHHHHHHHhhhc
Q 016521 329 TSICGAFVAIVGMSFYTYLNL 349 (388)
Q Consensus 329 ~~i~G~~li~~Gv~ly~~~~~ 349 (388)
.-++++++++.|..+|...++
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr 25 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNR 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 346788888899999875543
No 141
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=26.12 E-value=2.7e+02 Score=20.54 Aligned_cols=49 Identities=14% Similarity=0.277 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHHH-HHHHHHH--hhccCCChHHHHHHHHHHHHHHHHHHH
Q 016521 63 PIASLTFNFVVAVSI-IFMNKWV--LKNIGFQFPIFLSFIHYAVSWALMAVL 111 (388)
Q Consensus 63 ~~~~~~~~~~~s~~~-~~~nK~~--~~~~g~~~p~~l~~~r~~~a~~~l~~~ 111 (388)
....+++|.+.+.+. .++...+ .+-.|+|....++.--..+.++++...
T Consensus 14 ~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fviLi~~ 65 (81)
T PF13937_consen 14 IAILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVILIFV 65 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHHHHHH
Confidence 344567788888777 5555554 223578866666655555555555443
No 142
>PRK15432 autoinducer 2 ABC transporter permease LsrC; Provisional
Probab=24.29 E-value=2e+02 Score=27.58 Aligned_cols=23 Identities=13% Similarity=0.013 Sum_probs=14.8
Q ss_pred cccchhhhHHHHHHHHHHHhhhc
Q 016521 327 GTTSICGAFVAIVGMSFYTYLNL 349 (388)
Q Consensus 327 t~~~i~G~~li~~Gv~ly~~~~~ 349 (388)
.+..+++.++++..+.+..+.++
T Consensus 287 ~~~~ii~g~lll~vl~~~~~~~~ 309 (344)
T PRK15432 287 WWNDFIAGLVLLGVLVFDGRLRC 309 (344)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHH
Confidence 35667777777777766654443
No 143
>PF06432 GPI2: Phosphatidylinositol N-acetylglucosaminyltransferase; InterPro: IPR009450 Glycosylphosphatidylinositol (GPI) represents an important anchoring molecule for cell surface proteins. The first step in its synthesis is the transfer of N-acetylglucosamine (GlcNAc) from UDP-N-acetylglucosamine to phosphatidylinositol (PI). This step involves products of three or four genes in both yeast (GPI1, GPI2 and GPI3) and mammals (GPI1, PIG A, PIG H and PIG C), respectively.; GO: 0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity, 0006506 GPI anchor biosynthetic process, 0016021 integral to membrane
Probab=23.79 E-value=5.9e+02 Score=23.59 Aligned_cols=143 Identities=16% Similarity=0.171 Sum_probs=77.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHccCCCCC---CCc----ccchhH-HHHHHHHHHHHHhhhhhhhhcchhhHHHHHH
Q 016521 89 GFQFPIFLSFIHYAVSWALMAVLNAFALLPAS---PPA----KSGLLS-LFTLGFVMSFSTGLANVSLKYNSVGFYQMAK 160 (388)
Q Consensus 89 g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~---~~~----~~~~~~-~~~~~~~~~~~~~~~~~al~~~s~s~~~il~ 160 (388)
..+ |..++..-..+..+....+......+.. ..+ .+..+. ++..++.++++-.+....-.+.+=+.+++..
T Consensus 66 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ks~~li~~~l~~LSPVLkTLT~s~SsDSI~Als~ 144 (282)
T PF06432_consen 66 RLS-PRVLLWISTALTLLGYILWDLLSSKENREGRSSRLSSRLRNLKSSLLIFFFLLLLSPVLKTLTKSTSSDSIWALSF 144 (282)
T ss_pred CCC-hHHHHHHHHHHHHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHH
Confidence 355 7777777666655555554433332211 011 112222 5555666777777766666666667777665
Q ss_pred HhHHHHHHHHHHHHhcc---c-cchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016521 161 IAVTPSIVLAEFICYRK---R-VSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE 233 (388)
Q Consensus 161 ~~~p~~~~l~~~~~l~e---~-~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~ 233 (388)
.+..+-+....+=.... + .+....+++=.++.|.++.. ...+.+.--+.+.+.|...+++.-++.++++++.
T Consensus 145 ~l~l~~l~~~DY~~~~~~~~~~~~~~~~lSlNaAl~asvvLA-SRL~s~~~VF~lll~ai~lF~l~P~~r~~l~~~s 220 (282)
T PF06432_consen 145 WLFLLHLLFHDYSYSNSYVSRGISLPSSLSLNAALFASVVLA-SRLPSTLHVFALLLFAIQLFALFPIFRRRLRRHS 220 (282)
T ss_pred HHHHHHHHHHhcccccccccccCCCCCcchHHHHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 54444444444422111 1 22344555555555544432 1223334456677788889999999988876553
No 144
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=23.55 E-value=1.1e+02 Score=25.24 Aligned_cols=24 Identities=13% Similarity=0.023 Sum_probs=11.7
Q ss_pred CchhhHHHhhhhhHHHHHHHHHhh
Q 016521 298 TSAISHVVLGQFKTCIILLGNYYI 321 (388)
Q Consensus 298 ~~a~~~sv~~~l~~v~~~~~~~l~ 321 (388)
-+....+.+.|+-|.+..+++.++
T Consensus 72 kslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 72 KSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555554444443
No 145
>TIGR01943 rnfA electron transport complex, RnfABCDGE type, A subunit. The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the A subunit.
Probab=23.51 E-value=5e+02 Score=22.63 Aligned_cols=21 Identities=5% Similarity=0.244 Sum_probs=10.6
Q ss_pred HHHHHHHhccccchhhHHHHH
Q 016521 168 VLAEFICYRKRVSVLKVITLT 188 (388)
Q Consensus 168 ~l~~~~~l~e~~~~~~~~~l~ 188 (388)
.+.+.++.|-.+...+-+++.
T Consensus 85 ~~ve~~l~~~~p~ly~~LGif 105 (190)
T TIGR01943 85 QFVEMVVRKTSPDLYRALGIF 105 (190)
T ss_pred HHHHHHHHHhChHHHHHHhhh
Confidence 334444444556656555554
No 146
>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1
Probab=23.51 E-value=5.4e+02 Score=24.56 Aligned_cols=11 Identities=0% Similarity=0.066 Sum_probs=5.1
Q ss_pred HHHHHHHHHHh
Q 016521 165 PSIVLAEFICY 175 (388)
Q Consensus 165 ~~~~l~~~~~l 175 (388)
.+....++.+.
T Consensus 62 l~~~~~g~~L~ 72 (340)
T PF12794_consen 62 LLLLAIGYLLQ 72 (340)
T ss_pred HHHHHHHHHHH
Confidence 34444455444
No 147
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=23.37 E-value=72 Score=23.75 Aligned_cols=24 Identities=21% Similarity=0.355 Sum_probs=20.2
Q ss_pred CccccchhhhHHHHHHHHHHHhhh
Q 016521 325 NPGTTSICGAFVAIVGMSFYTYLN 348 (388)
Q Consensus 325 ~~t~~~i~G~~li~~Gv~ly~~~~ 348 (388)
..++..++|+.++++|..+|..+.
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~ 27 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRF 27 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999997544
No 148
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=23.17 E-value=2.8e+02 Score=25.24 Aligned_cols=46 Identities=15% Similarity=0.068 Sum_probs=30.6
Q ss_pred HHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhH
Q 016521 290 SGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAF 335 (388)
Q Consensus 290 ~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~ 335 (388)
..+.+.++.+++....-..++-.+.++...+++.-.-....-.+++
T Consensus 111 sf~vcy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~~~a~~~i 156 (249)
T PF10225_consen 111 SFAVCYRYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDPEFAFAAI 156 (249)
T ss_pred HHHhhcccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 3344567888888888888888888887777776544444333333
No 149
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=23.04 E-value=6.8e+02 Score=24.04 Aligned_cols=102 Identities=17% Similarity=0.111 Sum_probs=62.1
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhc-------cccchhhHHHHHhhhhheeee
Q 016521 126 GLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYR-------KRVSVLKVITLTAVSIGVAVA 197 (388)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~-------e~~~~~~~~~l~l~~~Gv~l~ 197 (388)
..+.....|++.+.....+=.+.+|+.+|..+-+. .+...+-.++-.++.+ ++-....++++++.++|+++.
T Consensus 72 ~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~ 151 (344)
T PF06379_consen 72 TLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAIC 151 (344)
T ss_pred HHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHH
Confidence 33345556777666655656677886665544332 1223333344334333 233445688999999999887
Q ss_pred eecc-----------cccc-HHHHHHHHHHHHHHHHHHHHHH
Q 016521 198 TVTD-----------LQFS-LFGACVALAWIVPSAVNKILWS 227 (388)
Q Consensus 198 ~~~~-----------~~~~-~~G~~~~l~a~~~~a~~~i~~~ 227 (388)
.... .+++ ..|.+.++.+.+.+|..++-.+
T Consensus 152 g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 152 GKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred hHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 5421 1222 4799999999999998887543
No 150
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=22.26 E-value=5.1e+02 Score=22.62 Aligned_cols=20 Identities=5% Similarity=0.335 Sum_probs=9.8
Q ss_pred HHHHHHhccccchhhHHHHH
Q 016521 169 LAEFICYRKRVSVLKVITLT 188 (388)
Q Consensus 169 l~~~~~l~e~~~~~~~~~l~ 188 (388)
+.+.++.|-.++..+-+++.
T Consensus 87 ~ve~~l~~~~p~Ly~~LGif 106 (193)
T PRK05151 87 FTEMVVRKTSPTLYRLLGIF 106 (193)
T ss_pred HHHHHHHHHhHHHHHHHhhh
Confidence 33444444455555555544
No 151
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]
Probab=21.52 E-value=7.8e+02 Score=24.16 Aligned_cols=82 Identities=13% Similarity=0.228 Sum_probs=36.1
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccch--hHHHHHHHHHHHHH-hhhhhhhhcchhhHHHHHHHhHH
Q 016521 88 IGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGL--LSLFTLGFVMSFST-GLANVSLKYNSVGFYQMAKIAVT 164 (388)
Q Consensus 88 ~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~al~~~s~s~~~il~~~~p 164 (388)
.++..|.+. +.++++.++--++...++.. ..++.- ..-...+++.+... .+.-|.+.-...+...++. .+.
T Consensus 244 ~~~~lP~fv--~~lfvgiIvrni~~~~~~~~---v~~~~v~~ig~vsL~lflamALmSlkLweL~~l~lpl~viL~-vQ~ 317 (404)
T COG0786 244 LGLALPLFV--MCLFVGVILRNILDLLKKYR---VFRRAVDVIGNVSLSLFLAMALMSLKLWELADLALPLLVILA-VQT 317 (404)
T ss_pred ccccccHHH--HHHHHHHHHHhHHHHhcccc---ccHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccccHHHHHH-HHH
Confidence 556667654 33455555555554443322 112211 11222233332221 1233444444455555444 566
Q ss_pred HHHHHHHHHHh
Q 016521 165 PSIVLAEFICY 175 (388)
Q Consensus 165 ~~~~l~~~~~l 175 (388)
++.+++++++.
T Consensus 318 i~m~lfa~fvt 328 (404)
T COG0786 318 IVMALFAIFVT 328 (404)
T ss_pred HHHHHHHHHHH
Confidence 66666665543
No 152
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=20.34 E-value=5.7e+02 Score=22.14 Aligned_cols=43 Identities=19% Similarity=0.135 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCC
Q 016521 283 LGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGAN 325 (388)
Q Consensus 283 ~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~ 325 (388)
++..+|...+.-.+..+..+.-+.++++....-+..++.-+|+
T Consensus 118 famg~Qn~~~~~~~g~~~~Tt~~TG~l~~~~~~l~~~~~~~~~ 160 (209)
T PF06912_consen 118 FAMGMQNAAFRRLGGVSIRTTFMTGNLTDLGIDLARYLRGKDR 160 (209)
T ss_pred HHHHHHHHHHHHcCCCcccchhhHhhHHHHHHHHHHHHhCCch
Confidence 3444555566555556666677889999998888888877776
No 153
>PRK14774 lipoprotein signal peptidase; Provisional
Probab=20.16 E-value=1.7e+02 Score=25.35 Aligned_cols=10 Identities=0% Similarity=-0.021 Sum_probs=4.3
Q ss_pred cchhhhHHHH
Q 016521 329 TSICGAFVAI 338 (388)
Q Consensus 329 ~~i~G~~li~ 338 (388)
-++.=+.+++
T Consensus 132 FNvAD~~I~i 141 (185)
T PRK14774 132 FNVADIAIFA 141 (185)
T ss_pred EEHHHHHHHH
Confidence 3444444443
Done!