Query 016523
Match_columns 388
No_of_seqs 192 out of 1479
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 15:00:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016523.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016523hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 1.6E-67 5.3E-72 544.9 33.9 363 23-388 113-478 (478)
2 2x0b_A Renin; hydrolase-hormon 100.0 6.9E-48 2.3E-52 387.9 28.4 259 23-388 123-383 (383)
3 3psg_A Pepsinogen; hydrolase(a 100.0 1.4E-47 4.8E-52 383.2 26.1 255 23-388 116-370 (370)
4 1lya_B Cathepsin D; lysosomal 100.0 6.1E-47 2.1E-51 355.3 26.7 240 47-388 2-241 (241)
5 1tzs_A Cathepsin E; hydrolase, 100.0 7.6E-46 2.6E-50 366.9 28.1 260 23-388 83-342 (351)
6 3k1w_A Renin; protease, altern 100.0 1.2E-45 4.2E-50 362.2 27.5 259 23-388 80-340 (341)
7 1htr_B Gastricsin; aspartyl pr 100.0 1.5E-45 5.1E-50 361.1 27.0 257 23-388 72-329 (329)
8 1dpj_A Proteinase A; proteinas 100.0 3.2E-45 1.1E-49 358.8 28.8 256 23-388 73-329 (329)
9 3cms_A Chymosin B; hydrolase, 100.0 5.1E-45 1.7E-49 356.8 28.6 250 23-388 74-323 (323)
10 1am5_A Pepsin, acid proteinase 100.0 6.1E-45 2.1E-49 356.0 27.6 253 23-388 72-324 (324)
11 4aa9_A Chymosin; hydrolase, as 100.0 7.4E-45 2.5E-49 354.1 27.6 250 23-388 71-320 (320)
12 1yg9_A Aspartic protease BLA G 100.0 5.1E-45 1.7E-49 358.5 24.8 250 23-388 76-329 (330)
13 1miq_A Plasmepsin; aspartic pr 100.0 5E-43 1.7E-47 350.8 28.7 249 23-388 122-374 (375)
14 1ibq_A Aspergillopepsin; aspar 100.0 1E-42 3.6E-47 341.0 27.2 250 23-388 71-325 (325)
15 3qvc_A Histo-aspartic protease 100.0 1E-42 3.6E-47 357.3 27.3 249 23-388 197-449 (451)
16 1izd_A Aspartic proteinase; su 100.0 1.6E-42 5.5E-47 339.7 27.0 247 23-388 72-323 (323)
17 1mpp_A Pepsin; hydrolase(acid 100.0 5.9E-43 2E-47 346.8 23.1 253 23-388 79-355 (361)
18 1bxo_A Protein (penicillopepsi 100.0 1.4E-42 4.8E-47 339.8 25.3 247 23-388 72-323 (323)
19 1wkr_A Polyporopepsin; hydrola 100.0 2.4E-42 8.3E-47 339.7 25.5 255 23-388 60-333 (340)
20 2bju_A Plasmepsin II; aspartic 100.0 3.8E-42 1.3E-46 353.4 25.7 250 23-388 198-450 (453)
21 3c9x_A Trichoderma reesei aspa 100.0 1.4E-41 4.7E-46 333.6 27.0 249 23-387 76-329 (329)
22 1oew_A Endothiapepsin; hydrola 100.0 1.1E-41 3.7E-46 334.4 24.9 249 23-387 75-329 (329)
23 2apr_A Rhizopuspepsin; hydrola 100.0 2.7E-41 9.4E-46 330.9 27.2 248 23-388 74-324 (325)
24 3fv3_A SAPP1P-secreted asparti 100.0 2.3E-40 8E-45 324.8 25.7 243 23-388 75-329 (339)
25 2qzx_A Candidapepsin-5; aspart 100.0 5E-40 1.7E-44 323.5 27.1 244 23-388 81-331 (342)
26 1j71_A Candidapepsin, aspartic 100.0 7.2E-40 2.5E-44 321.7 26.9 239 23-388 81-324 (334)
27 3pvk_A Candidapepsin-2; hydrol 100.0 1E-39 3.4E-44 320.3 25.8 245 23-388 81-331 (342)
28 2ewy_A Beta-secretase 2; BACE2 100.0 1.2E-37 4.1E-42 310.6 23.0 262 23-388 69-355 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 1.3E-37 4.6E-42 312.5 21.8 262 23-388 84-374 (402)
30 3aup_A SBG7S, BG, basic 7S glo 100.0 1.2E-37 4E-42 313.8 20.8 257 23-387 97-386 (403)
31 3lpj_A Beta-secretase 1; alzhe 100.0 1.8E-37 6.1E-42 317.3 22.1 264 23-388 130-420 (455)
32 2qp8_A Beta-secretase 1; BACE1 100.0 5.6E-37 1.9E-41 307.6 24.5 261 23-388 77-367 (395)
33 3vla_A EDGP; extracellular, in 100.0 6.2E-37 2.1E-41 310.8 18.7 256 23-387 96-398 (413)
34 1t6e_X Xylanase inhibitor; two 100.0 3.5E-36 1.2E-40 301.0 17.1 263 23-388 84-373 (381)
35 1b5f_A Protein (cardosin A); h 100.0 2.6E-28 8.9E-33 229.7 18.8 165 23-194 74-238 (239)
36 1b5f_B Protein (cardosin A); h 99.8 5.5E-21 1.9E-25 153.4 9.3 87 301-388 1-87 (87)
37 3rfi_A Asp; PSI, saposin, hydr 99.8 2.8E-20 9.6E-25 156.1 4.0 105 193-297 2-108 (108)
38 2qyp_A Proactivator polypeptid 97.6 3.9E-05 1.3E-09 61.3 3.4 39 198-236 46-84 (91)
39 3bqp_A Proactivator polypeptid 97.4 4.5E-05 1.5E-09 58.9 1.7 37 198-234 43-79 (80)
40 2gtg_A Proactivator polypeptid 97.3 5.6E-05 1.9E-09 59.2 1.7 38 198-235 45-82 (83)
41 2qyp_A Proactivator polypeptid 97.3 9.2E-05 3.2E-09 59.1 2.4 50 257-309 3-52 (91)
42 4ddj_A Saposin-A, protein A; s 97.3 0.00014 4.9E-09 56.9 3.2 41 259-299 3-43 (83)
43 2js9_A Saposin-like protein fa 97.2 8.9E-05 3E-09 60.8 1.7 37 198-234 63-99 (99)
44 1nkl_A NK-lysin; saposin fold, 97.2 0.00021 7.2E-09 55.7 3.7 46 186-234 32-77 (78)
45 3bqp_A Proactivator polypeptid 97.2 0.00016 5.5E-09 55.8 2.9 46 260-308 3-48 (80)
46 1of9_A Pore-forming peptide am 97.2 0.00021 7.1E-09 55.7 3.0 41 258-299 1-41 (77)
47 2gtg_A Proactivator polypeptid 97.1 0.00027 9.2E-09 55.2 3.2 42 257-298 2-43 (83)
48 1l9l_A Granulysin; saposin fol 97.1 0.00021 7.3E-09 55.5 2.6 38 260-298 2-39 (74)
49 1of9_A Pore-forming peptide am 97.1 0.00015 5.2E-09 56.4 1.4 37 197-233 41-77 (77)
50 4ddj_A Saposin-A, protein A; s 97.0 0.00017 5.8E-09 56.4 1.1 37 198-234 45-82 (83)
51 1n69_A Saposin B; lipid bindin 96.9 0.00029 9.8E-09 55.2 1.5 37 197-234 44-80 (81)
52 1nkl_A NK-lysin; saposin fold, 96.8 0.00042 1.4E-08 54.0 2.0 39 260-298 2-40 (78)
53 1n69_A Saposin B; lipid bindin 96.8 0.00064 2.2E-08 53.2 2.9 41 259-299 3-44 (81)
54 1l9l_A Granulysin; saposin fol 96.4 0.00099 3.4E-08 51.7 1.7 34 198-231 41-74 (74)
55 2js9_A Saposin-like protein fa 96.4 0.00049 1.7E-08 56.4 -0.4 52 257-310 19-70 (99)
56 3s64_A AC-SLP-1, saposin-like 95.5 0.0042 1.4E-07 49.7 1.6 51 183-233 36-87 (87)
57 2i1a_A DNA damage-inducible pr 91.2 0.59 2E-05 39.5 7.5 26 360-385 109-134 (148)
58 3s8i_A Protein DDI1 homolog 1; 67.0 3.7 0.00013 35.3 3.2 26 360-385 108-133 (148)
59 3s64_A AC-SLP-1, saposin-like 45.1 3.3 0.00011 32.8 -0.8 38 259-298 10-47 (87)
60 1bxo_A Protein (penicillopepsi 44.6 23 0.0008 33.3 5.0 41 133-183 4-44 (323)
61 1ibq_A Aspergillopepsin; aspar 42.0 24 0.00083 33.2 4.6 41 133-183 3-43 (325)
62 1izd_A Aspartic proteinase; su 41.6 28 0.00095 32.8 5.0 41 133-183 4-44 (323)
63 1mpp_A Pepsin; hydrolase(acid 28.5 55 0.0019 31.1 4.8 41 133-183 5-49 (361)
64 1oew_A Endothiapepsin; hydrola 28.2 56 0.0019 30.7 4.7 40 134-183 4-46 (329)
65 3c9x_A Trichoderma reesei aspa 27.0 61 0.0021 30.5 4.7 41 133-183 3-46 (329)
66 1fmb_A EIAV protease; hydrolas 25.9 28 0.00097 28.1 1.8 34 146-186 6-39 (104)
67 2apr_A Rhizopuspepsin; hydrola 25.7 71 0.0024 29.9 4.9 40 134-183 5-46 (325)
68 1lya_A Cathepsin D; lysosomal 23.1 57 0.0019 25.4 3.1 21 23-43 75-95 (97)
69 2hah_A Protease, retropepsin; 22.3 42 0.0014 27.7 2.2 30 145-182 11-40 (116)
70 2hs1_A HIV-1 protease; ultra-h 21.6 38 0.0013 27.2 1.7 30 146-182 6-35 (99)
71 3ec0_A Protease; HIV-2, inhibi 20.8 39 0.0013 27.2 1.6 29 146-181 6-34 (99)
72 3cms_A Chymosin B; hydrolase, 20.3 94 0.0032 29.0 4.5 40 136-183 4-45 (323)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.6e-67 Score=544.94 Aligned_cols=363 Identities=62% Similarity=1.115 Sum_probs=314.8
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|+|+.+.++|+++.|+|+++ ++++++|.||+++.+.+..|...++|||||||++.++..+..|+|++|++||+|++
T Consensus 113 ~i~Yg~Gs~~G~~~~Dtv~ig---~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~ 189 (478)
T 1qdm_A 113 AIQYGTGSIAGYFSEDSVTVG---DLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSD 189 (478)
T ss_dssp EEEETTEEEEEEEEEEEEEET---TEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSS
T ss_pred EEEcCCCCeEEEEEEEEEEEC---CeEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHHHHHHCCCCCC
Confidence 588988889999999999999 89999999999998877667777889999999999987778899999999999999
Q ss_pred ceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 103 EVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 103 ~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
++||+||+++++...+|+|+|||+|++++.|++.|+|+.+.+||.+.+++|+++++.+.++..+..+++||||+++++|+
T Consensus 190 ~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~ 269 (478)
T 1qdm_A 190 PVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPT 269 (478)
T ss_dssp SEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECH
T ss_pred CEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCH
Confidence 99999999864334589999999999999999999999999999999999999999877666788999999999999999
Q ss_pred HHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecc---cccCCCC
Q 016523 183 PVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKE---NVSAGDS 259 (388)
Q Consensus 183 ~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~---~~~~~~~ 259 (388)
+++++|.+++++.++++.+|+++|++|++.|+++|.+++.|+++|+++++|.+++.+.++.+++.|++++ +.+..+.
T Consensus 270 ~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 349 (478)
T 1qdm_A 270 AIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRAD 349 (478)
T ss_dssp HHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---------------------------CH
T ss_pred HHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999988888888888875 3345677
Q ss_pred cccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccC
Q 016523 260 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEG 339 (388)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~ 339 (388)
..|.+|||||.|++++|++|+|+++|+.+++++|.++|...|.|.++|+.+.++|+|+|+|+|+.|+|+|++|+++..++
T Consensus 350 ~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~ 429 (478)
T 1qdm_A 350 PMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEG 429 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCG
T ss_pred ccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccEEEEECCEEEEEChHHhEEEccCC
Confidence 89999999999999999999999999999999999999999999999998889999999999999999999999987654
Q ss_pred cccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 340 IAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 340 ~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
....|+++|+..+.+++.++.||||++|||++|+|||++++|||||++|
T Consensus 430 ~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 430 AAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp GGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 4568999999888766667899999999999999999999999999986
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=6.9e-48 Score=387.86 Aligned_cols=259 Identities=36% Similarity=0.750 Sum_probs=232.2
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|+|+.+.++|+++.|+|+++ +++++ |.||+++.+++..|....+|||||||++.++..+..|+|++|++||+|++
T Consensus 123 ~i~Yg~Gs~~G~~~~Dtv~ig---~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~ 198 (383)
T 2x0b_A 123 TLRYSTGTVSGFLSQDIITVG---GITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKE 198 (383)
T ss_dssp EEECSSCEEEEEEEEEEEEET---TEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSS
T ss_pred EEEcCCccEEEEEEeeEEEEc---CceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCC
Confidence 688999999999999999999 89999 99999999877667778899999999999988888899999999999999
Q ss_pred ceEEEEecCCCCCC--CCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCccc
Q 016523 103 EVFSFWLNRDPDAE--EGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAG 180 (388)
Q Consensus 103 ~~FSl~L~~~~~~~--~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~l 180 (388)
++||+||+++++.. .+|+|+|||+|+++++|+++|+|+.+.+||.|.+++|+++++.+. +..++.+++||||+++++
T Consensus 199 ~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~l 277 (383)
T 2x0b_A 199 DVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISG 277 (383)
T ss_dssp SEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEE
T ss_pred CEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEc
Confidence 99999999874321 489999999999999999999999999999999999999998753 567889999999999999
Q ss_pred CHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCc
Q 016523 181 PTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSA 260 (388)
Q Consensus 181 P~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (388)
|++++++|.+++++.
T Consensus 278 P~~~~~~i~~~i~a~----------------------------------------------------------------- 292 (383)
T 2x0b_A 278 STSSIEKLMEALGAK----------------------------------------------------------------- 292 (383)
T ss_dssp CHHHHHHHHHHHTCE-----------------------------------------------------------------
T ss_pred CHHHHHHHHHHhCCc-----------------------------------------------------------------
Confidence 999999999999653
Q ss_pred ccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCc
Q 016523 261 VCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGI 340 (388)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~ 340 (388)
+ ..+.|.++|+.+.++|+|+|+|+|+.++|+|++|+++..+.+
T Consensus 293 ------------------------------------~-~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~ 335 (383)
T 2x0b_A 293 ------------------------------------K-RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSS 335 (383)
T ss_dssp ------------------------------------E-CSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCT
T ss_pred ------------------------------------c-cCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCC
Confidence 1 235688999988899999999999999999999999865444
Q ss_pred ccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 341 AEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 341 ~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
...|+++|+..+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 336 ~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 336 KKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp TSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 568999999887665567899999999999999999999999999985
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.4e-47 Score=383.18 Aligned_cols=255 Identities=38% Similarity=0.728 Sum_probs=228.5
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|.|+.+.+.|.++.|+|+++ ++++++|.||+++.+.+..|....+|||||||+++++..+.+|++++|++||+|++
T Consensus 116 ~i~Yg~Gs~~G~~~~Dtv~ig---~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~ 192 (370)
T 3psg_A 116 SITYGTGSMTGILGYDTVQVG---GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQ 192 (370)
T ss_dssp EEESSSCEEEEEEEEEEEEET---TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSS
T ss_pred EEEeCCceEEEEEEEEEEeeC---CcccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHHHHCCCCCC
Confidence 688999999999999999999 89999999999998877778888899999999999988888899999999999999
Q ss_pred ceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 103 EVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 103 ~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
++||+||++.. ...|+|+|||+|++++.|+++|+|+.+.+||.|.+++|+++++.+. +..++.+++||||+++++|+
T Consensus 193 ~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~ 269 (370)
T 3psg_A 193 DLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPT 269 (370)
T ss_dssp SEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEH
T ss_pred CEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCH
Confidence 99999999863 2489999999999999999999999999999999999999998764 56788999999999999999
Q ss_pred HHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCccc
Q 016523 183 PVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVC 262 (388)
Q Consensus 183 ~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (388)
+++++|.+++++..
T Consensus 270 ~~~~~i~~~i~a~~------------------------------------------------------------------ 283 (370)
T 3psg_A 270 SAIANIQSDIGASE------------------------------------------------------------------ 283 (370)
T ss_dssp HHHHHHHHHTTCEE------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCcc------------------------------------------------------------------
Confidence 99999999997541
Q ss_pred chhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCccc
Q 016523 263 SACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAE 342 (388)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~ 342 (388)
...|.|.++|+...++|+|+|+|+|..++|+|++|+++ . .+
T Consensus 284 -----------------------------------~~~g~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~---~~ 324 (370)
T 3psg_A 284 -----------------------------------NSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ-D---DD 324 (370)
T ss_dssp -----------------------------------CTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEEE-C---SS
T ss_pred -----------------------------------cCCCcEEEECCCcccCCcEEEEECCEEEEECHHHhccc-C---CC
Confidence 23466999999888899999999999999999999998 2 34
Q ss_pred ceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 343 VCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 343 ~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
.|++.|+..+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 325 ~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 325 SCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp CEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 7999999887655556689999999999999999999999999986
No 4
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=6.1e-47 Score=355.32 Aligned_cols=240 Identities=48% Similarity=0.926 Sum_probs=211.7
Q ss_pred ceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCcceEEEEecCCCCCCCCcEEEECCC
Q 016523 47 LQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGV 126 (388)
Q Consensus 47 ~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgi 126 (388)
|+++++|.||+++.+++..|....+|||||||++.++....+|++++|++||+|++++||+||++.++....|+|+|||+
T Consensus 2 g~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred CeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 79999999999999877667777889999999999887778899999999999999999999998754334899999999
Q ss_pred CCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCHHHHHHHHHHhCCcceeecchhhhh
Q 016523 127 DPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVV 206 (388)
Q Consensus 127 d~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~ 206 (388)
|+++++|+++|+|+.+.+||.+.+++|+++++.+ .+..+..+++||||+++++|++++++|.+++++..
T Consensus 82 d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~-~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~---------- 150 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLT-LCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP---------- 150 (241)
T ss_dssp CGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCE-ESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----------
T ss_pred CHHHcCCceEEEECccccEEEEEEeEEEECCeeE-eccCCCEEEEECCCccccCCHHHHHHHHHHhCCee----------
Confidence 9999999999999999999999999999999875 24567899999999999999999999999996541
Q ss_pred hhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCcccchhhhhHHHHHHHhhhchhHHHHH
Q 016523 207 SQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVL 286 (388)
Q Consensus 207 ~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~ 286 (388)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCcccceeEeeEeccCCCCCCCceEEcHh
Q 016523 287 SYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDV 366 (388)
Q Consensus 287 ~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~i~~~d~~~~~~~~~ILG~~ 366 (388)
...+.|.++|+...++|+|+|.|+|++++|+|++|+++..+.....|++.|+..+.+.+.++.||||++
T Consensus 151 -----------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~ 219 (241)
T 1lya_B 151 -----------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDV 219 (241)
T ss_dssp -----------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHH
T ss_pred -----------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechH
Confidence 013568899998778999999999999999999999987644456899999987655445678999999
Q ss_pred hhcceEEEEeCCCCeEEEEecC
Q 016523 367 FMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 367 Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
|||++|+|||++++|||||+++
T Consensus 220 fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 220 FIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HHTTEEEEEETTTTEEEEEEEC
T ss_pred HhcceEEEEECCCCEEEEEEcC
Confidence 9999999999999999999985
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.6e-46 Score=366.87 Aligned_cols=260 Identities=40% Similarity=0.740 Sum_probs=227.1
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|+|+.+.+.|.++.|+|+++ ++++++|.||+++.+.+..|....+|||||||++.++.....+++++|++||+|++
T Consensus 83 ~i~Yg~Gs~~G~~~~D~v~ig---~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~ 159 (351)
T 1tzs_A 83 SIQYGTGSLSGIIGADQVSVE---GLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDL 159 (351)
T ss_dssp EEESSSCEEEEEEEEEEEEET---TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSS
T ss_pred EEEeCCCCeEEEEEEeEEEEC---CeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCC
Confidence 688888889999999999999 89999999999998777667777889999999999887778899999999999999
Q ss_pred ceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 103 EVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 103 ~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
++||+||++.++....|.|+|||+|++++.|++.|+|+.+.+||.|.+++|+++++.+. +..+..+++||||+++++|+
T Consensus 160 ~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~ 238 (351)
T 1tzs_A 160 PMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPS 238 (351)
T ss_dssp SEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECH
T ss_pred CEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCH
Confidence 99999999875433489999999999999999999999999999999999999998753 45678899999999999999
Q ss_pred HHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCccc
Q 016523 183 PVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVC 262 (388)
Q Consensus 183 ~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (388)
+++++|.+++++..
T Consensus 239 ~~~~~l~~~~~~~~------------------------------------------------------------------ 252 (351)
T 1tzs_A 239 DKIKQLQNAIGAAP------------------------------------------------------------------ 252 (351)
T ss_dssp HHHHHHHHHHTCEE------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCcc------------------------------------------------------------------
Confidence 99999999996541
Q ss_pred chhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCccc
Q 016523 263 SACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAE 342 (388)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~ 342 (388)
.. +.|.++|..+.++|+|+|+|+|..++|+|++|+++....+..
T Consensus 253 -----------------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~ 296 (351)
T 1tzs_A 253 -----------------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQ 296 (351)
T ss_dssp -----------------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----C
T ss_pred -----------------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCC
Confidence 11 568899998778999999999999999999999976543346
Q ss_pred ceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 343 VCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 343 ~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
.|+++|+..+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 297 ~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~ 342 (351)
T 1tzs_A 297 FCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAV 342 (351)
T ss_dssp CEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred eEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECC
Confidence 8999999876554456789999999999999999999999999975
No 6
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.2e-45 Score=362.20 Aligned_cols=259 Identities=36% Similarity=0.747 Sum_probs=228.8
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|.|+.+.+.|.++.|+|+++ ++++ +|.||+++...+..|....+|||||||++.++.....|++++|++||+|++
T Consensus 80 ~i~Yg~gs~~G~~~~D~v~ig---~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~ 155 (341)
T 3k1w_A 80 TLRYSTGTVSGFLSQDIITVG---GITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKE 155 (341)
T ss_dssp EEEETTEEEEEEEEEEEEEET---TEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSS
T ss_pred EEEECCcEEEEEEEEEEEEEC---Ccee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCC
Confidence 688888889999999999999 8999 999999998766556677889999999999887778899999999999999
Q ss_pred ceEEEEecCCC--CCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCccc
Q 016523 103 EVFSFWLNRDP--DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAG 180 (388)
Q Consensus 103 ~~FSl~L~~~~--~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~l 180 (388)
++||+||.+.. +....|.|+|||+|++++.|+++|+|+.+.+||.|.+++|+++++.+. +..+..+++||||+++++
T Consensus 156 ~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~l 234 (341)
T 3k1w_A 156 DVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISG 234 (341)
T ss_dssp SEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEE
T ss_pred CEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcC
Confidence 99999999875 223489999999999999999999999999999999999999998753 456788999999999999
Q ss_pred CHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCc
Q 016523 181 PTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSA 260 (388)
Q Consensus 181 P~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (388)
|++++++|.+++++..
T Consensus 235 P~~~~~~i~~~~~~~~---------------------------------------------------------------- 250 (341)
T 3k1w_A 235 STSSIEKLMEALGAKK---------------------------------------------------------------- 250 (341)
T ss_dssp CHHHHHHHHHHHTCEE----------------------------------------------------------------
T ss_pred CHHHHHHHHHHcCCee----------------------------------------------------------------
Confidence 9999999999996541
Q ss_pred ccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCc
Q 016523 261 VCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGI 340 (388)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~ 340 (388)
...| |.++|+...++|+|+|+|+|..++|+|++|+++.....
T Consensus 251 -------------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~ 292 (341)
T 3k1w_A 251 -------------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSS 292 (341)
T ss_dssp -------------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCT
T ss_pred -------------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCC
Confidence 1124 89999987789999999999999999999999865544
Q ss_pred ccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 341 AEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 341 ~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
...|++.|+..+.+...++.||||++|||++|+|||++++|||||+++
T Consensus 293 ~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 293 KKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp TSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 678999999877654556789999999999999999999999999985
No 7
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.5e-45 Score=361.08 Aligned_cols=257 Identities=36% Similarity=0.685 Sum_probs=227.3
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|+|+.+.+.|.++.|+|+++ ++++++|.||+++.+.+..|.....|||||||++.++.....|++++|++||+|++
T Consensus 72 ~i~Yg~gs~~G~~~~D~v~~g---~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~ 148 (329)
T 1htr_B 72 SLQYGSGSLTGFFGYDTLTVQ---SIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTS 148 (329)
T ss_dssp EEEETTEEEEEEEEEEEEEET---TEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSS
T ss_pred EEEeCCCCeEEEEEeeeEEEc---ceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCC
Confidence 578888888999999999999 89999999999998766667667889999999999888778899999999999999
Q ss_pred ceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 103 EVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 103 ~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
++||+||++.+.. ..|.|+|||+|+++++|++.|+|+.+.+||.|.+++|+++++.+..+..+..+++||||+++++|+
T Consensus 149 ~~Fs~~L~~~~~~-~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~ 227 (329)
T 1htr_B 149 PVFSVYLSNQQGS-SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQ 227 (329)
T ss_dssp SEEEEEECSSCSS-EEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEG
T ss_pred CEEEEEEcCCCCC-CCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCH
Confidence 9999999987431 379999999999999999999999999999999999999998764345678999999999999999
Q ss_pred HHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCccc
Q 016523 183 PVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVC 262 (388)
Q Consensus 183 ~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (388)
+++++|.+++++..
T Consensus 228 ~~~~~l~~~~~~~~------------------------------------------------------------------ 241 (329)
T 1htr_B 228 QYMSALLQATGAQE------------------------------------------------------------------ 241 (329)
T ss_dssp GGHHHHHHHHTCEE------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCee------------------------------------------------------------------
Confidence 99999999996541
Q ss_pred chhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCccc
Q 016523 263 SACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAE 342 (388)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~ 342 (388)
...+.|.++|....++|+|+|+|+|..++|+|++|+++.. +
T Consensus 242 -----------------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g 282 (329)
T 1htr_B 242 -----------------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----G 282 (329)
T ss_dssp -----------------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----S
T ss_pred -----------------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----C
Confidence 1135588999987789999999999999999999999864 3
Q ss_pred ceeEeeEeccCCCCCCC-ceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 343 VCISGFMAFDLPPPRGP-LWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 343 ~C~~~i~~~d~~~~~~~-~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
.|++.|+..+.+.+.++ .||||++|||++|+|||++++|||||+++
T Consensus 283 ~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 283 YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 89999998765444556 89999999999999999999999999985
No 8
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.2e-45 Score=358.76 Aligned_cols=256 Identities=34% Similarity=0.635 Sum_probs=226.2
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|+|+.+.+.|.++.|+|+++ ++++++|.||+++.+.+..|.....|||||||++.++.....+++++|++||+|++
T Consensus 73 ~i~Yg~Gs~~G~~~~D~v~ig---~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~ 149 (329)
T 1dpj_A 73 AIQYGTGSLEGYISQDTLSIG---DLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDE 149 (329)
T ss_dssp EEEETTEEEEEEEEEEEEEET---TEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSS
T ss_pred EEEECCceEEEEEEEEEEEEC---CeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCC
Confidence 688888889999999999999 89999999999998766456667789999999999887777889999999999999
Q ss_pred ceEEEEecCCCC-CCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccC
Q 016523 103 EVFSFWLNRDPD-AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGP 181 (388)
Q Consensus 103 ~~FSl~L~~~~~-~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP 181 (388)
++||+||.+... ....|+|+|||+|++++.|++.|+|+.+.+||.|.+++|+++++.+. ..+..+++||||+++++|
T Consensus 150 ~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP 227 (329)
T 1dpj_A 150 KRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLP 227 (329)
T ss_dssp SEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEEC
T ss_pred CEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECC
Confidence 999999987532 23479999999999999999999999999999999999999998764 356789999999999999
Q ss_pred HHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCcc
Q 016523 182 TPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAV 261 (388)
Q Consensus 182 ~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (388)
++++++|.+++++.
T Consensus 228 ~~~~~~l~~~~~~~------------------------------------------------------------------ 241 (329)
T 1dpj_A 228 SGLAEMINAEIGAK------------------------------------------------------------------ 241 (329)
T ss_dssp HHHHHHHHHHHTCE------------------------------------------------------------------
T ss_pred HHHHHHHHHHhCCc------------------------------------------------------------------
Confidence 99999999999643
Q ss_pred cchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCcc
Q 016523 262 CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIA 341 (388)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~ 341 (388)
+...+.|.++|+...++|+|+|+|+|..++|+|++|+++..
T Consensus 242 -----------------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~---- 282 (329)
T 1dpj_A 242 -----------------------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS---- 282 (329)
T ss_dssp -----------------------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----
T ss_pred -----------------------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----
Confidence 02245688999987789999999999999999999999753
Q ss_pred cceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 342 EVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 342 ~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
..|++.|+..+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 283 ~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 283 GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 57999999876554456789999999999999999999999999985
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5.1e-45 Score=356.82 Aligned_cols=250 Identities=36% Similarity=0.658 Sum_probs=222.1
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|+|+.+.++|.++.|+|+++ ++++++|.||+++.+.+..|.....|||||||++.++....++++++|++||+|++
T Consensus 74 ~i~Yg~Gs~~G~~~~D~v~ig---~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~ 150 (323)
T 3cms_A 74 SIHYGTGSMQGILGYDTVTVS---NIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQ 150 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEET---TEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSS
T ss_pred EEEeCCCCeEEEEEEEEEEEC---CeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCC
Confidence 678888888999999999999 89999999999998766556667789999999999988788899999999999999
Q ss_pred ceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 103 EVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 103 ~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
++||+||.+.+. .|+|+|||+|++++.|++.|+|+.+.+||.+.+++|+++++.+. +..+..+++||||+++++|+
T Consensus 151 ~~FS~~l~~~~~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~ 226 (323)
T 3cms_A 151 DLFSVYMDRNGQ---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPS 226 (323)
T ss_dssp SEEEEECCTTSS---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECH
T ss_pred CEEEEEECCCCC---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCH
Confidence 999999998642 49999999999999999999999999999999999999998764 34678899999999999999
Q ss_pred HHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCccc
Q 016523 183 PVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVC 262 (388)
Q Consensus 183 ~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (388)
+++++|.+++++..
T Consensus 227 ~~~~~l~~~~~~~~------------------------------------------------------------------ 240 (323)
T 3cms_A 227 SDILNIQQAIGATQ------------------------------------------------------------------ 240 (323)
T ss_dssp HHHHHHHHHHTCEE------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCee------------------------------------------------------------------
Confidence 99999999996531
Q ss_pred chhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCccc
Q 016523 263 SACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAE 342 (388)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~ 342 (388)
...+.|.++|....++|+|+|+|+|..++|+|++|+++ ...
T Consensus 241 -----------------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~ 281 (323)
T 3cms_A 241 -----------------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQG 281 (323)
T ss_dssp -----------------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETT
T ss_pred -----------------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCC
Confidence 12356889999888999999999999999999999998 246
Q ss_pred ceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 343 VCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 343 ~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
.|++.|+..+ .++.||||++|||++|+|||++++|||||+++
T Consensus 282 ~C~~~i~~~~----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 282 FCTSGFQSEN----HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EEEESEEEC-------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEEeCC----CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 8999998653 34689999999999999999999999999985
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=6.1e-45 Score=356.03 Aligned_cols=253 Identities=35% Similarity=0.615 Sum_probs=225.0
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|+|+.+.+.|.++.|+|+++ ++++++|.||+++.+.+..|.....|||||||++.++.....|++++|++||+|++
T Consensus 72 ~i~Yg~Gs~~G~~~~D~v~~g---~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~ 148 (324)
T 1am5_A 72 DLTYGTGGMRGILGQDTVSVG---GGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEK 148 (324)
T ss_dssp EEECSSCEEEEEEEEEEEESS---SSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSS
T ss_pred EEEECCCCeEEEEEECceeEC---CcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCC
Confidence 678888888999999999999 89999999999998876667667889999999999887778899999999999999
Q ss_pred ceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 103 EVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 103 ~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
++||+||++.+. ..|.|+|||+|++++.|++.|+|+.+.+||.|.+++|+++++.+. +.. ..+++||||+++++|+
T Consensus 149 ~~FS~~l~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~ 224 (324)
T 1am5_A 149 DLFSFYLSGGGA--NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPV 224 (324)
T ss_dssp SEEEEECCSTTC--SCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECT
T ss_pred CEEEEEecCCCC--CCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCH
Confidence 999999998642 489999999999999999999999989999999999999998753 233 8899999999999999
Q ss_pred HHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCccc
Q 016523 183 PVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVC 262 (388)
Q Consensus 183 ~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (388)
+++++|.+++++.
T Consensus 225 ~~~~~l~~~~~~~------------------------------------------------------------------- 237 (324)
T 1am5_A 225 SALANIMKDIGAS------------------------------------------------------------------- 237 (324)
T ss_dssp TTHHHHHHHHTCE-------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCc-------------------------------------------------------------------
Confidence 9999999998531
Q ss_pred chhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCccc
Q 016523 263 SACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAE 342 (388)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~ 342 (388)
...+.|.++|....++|+|+|+|+|..++|+|++|+++. ..
T Consensus 238 -----------------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~ 278 (324)
T 1am5_A 238 -----------------------------------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QA 278 (324)
T ss_dssp -----------------------------------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SS
T ss_pred -----------------------------------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CC
Confidence 013458899998889999999999999999999999976 46
Q ss_pred ceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 343 VCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 343 ~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
.|++.|+..+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 279 ~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 279 FCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred eEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 8999999876544456789999999999999999999999999985
No 11
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=7.4e-45 Score=354.14 Aligned_cols=250 Identities=36% Similarity=0.660 Sum_probs=223.8
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|.|+.+.+.|.++.|+|+++ ++++++|.||+++.+.+..|....+|||||||++.++.....+++++|++||+|++
T Consensus 71 ~i~Yg~gs~~G~~~~D~v~ig---~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~ 147 (320)
T 4aa9_A 71 SIHYGTGSMEGFLGYDTVTVS---NIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVAR 147 (320)
T ss_dssp EEEETTEEEEEEEEEEEEEET---TEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSS
T ss_pred EEEECCcEEEEEEEEEEEEEC---CEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCC
Confidence 678888889999999999999 89999999999998876567777789999999999988788899999999999999
Q ss_pred ceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 103 EVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 103 ~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
++||+||.+. ...|+|+|||+|++++.|+++|+|+.+.+||.+.+++|+++++.+. +..+..+++||||+++++|+
T Consensus 148 ~~Fs~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~ 223 (320)
T 4aa9_A 148 DLFSVYMDRN---GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPS 223 (320)
T ss_dssp SEEEEECCSS---SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEH
T ss_pred ceEEEEeCCC---CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCH
Confidence 9999999986 2589999999999999999999999999999999999999998775 34577899999999999999
Q ss_pred HHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCccc
Q 016523 183 PVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVC 262 (388)
Q Consensus 183 ~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (388)
+++++|.+++++..
T Consensus 224 ~~~~~i~~~~~~~~------------------------------------------------------------------ 237 (320)
T 4aa9_A 224 SDILKIQMAIGATE------------------------------------------------------------------ 237 (320)
T ss_dssp HHHHHHHHHTTCEE------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCcc------------------------------------------------------------------
Confidence 99999999996531
Q ss_pred chhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCccc
Q 016523 263 SACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAE 342 (388)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~ 342 (388)
...+.|.++|+...++|+|+|+|+|..++|+|++|+.+ ...
T Consensus 238 -----------------------------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~ 278 (320)
T 4aa9_A 238 -----------------------------------NRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQG 278 (320)
T ss_dssp -----------------------------------CTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETT
T ss_pred -----------------------------------cCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCC
Confidence 12456899999888899999999999999999999976 236
Q ss_pred ceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 343 VCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 343 ~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
.|++.|+.. +.++.||||++|||++|+|||++++|||||+++
T Consensus 279 ~C~~~i~~~----~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 279 FCTSGFQGD----NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EEEESEEEE----TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEEcC----CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 899999863 234679999999999999999999999999986
No 12
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=5.1e-45 Score=358.45 Aligned_cols=250 Identities=29% Similarity=0.457 Sum_probs=220.9
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccc-cCCCCchhhhhhhcCCCC
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIA-VGDAVPVWDNMVEQGLVS 101 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s-~~~~~~~~~~L~~qg~i~ 101 (388)
.|.|+.+.+.|.++.|+|+++ ++++++|.||+++.+ +..|....+|||||||++.++ ....++++++|++||+|
T Consensus 76 ~i~Yg~Gs~~G~~~~Dtv~ig---~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i- 150 (330)
T 1yg9_A 76 VKFFDTGSAVGRGIEDSLTIS---QLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI- 150 (330)
T ss_dssp EEETTTEEEEEEEEEEEEEET---TEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-
T ss_pred EEEECCceEEEEEEEEEEEEC---CEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-
Confidence 578888888999999999999 899999999999987 545666778999999999888 66788999999999999
Q ss_pred cceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccC
Q 016523 102 EEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGP 181 (388)
Q Consensus 102 ~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP 181 (388)
+++||+||++.++....|+|+|||+|+++++|++.|+|+.+.+||.|.+++|+++++.+. ..+..+++||||+++++|
T Consensus 151 ~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP 228 (330)
T 1yg9_A 151 APVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGP 228 (330)
T ss_dssp CSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEE
T ss_pred CceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCC
Confidence 999999999874333489999999999999999999999999999999999999998764 467889999999999999
Q ss_pred HHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCcc
Q 016523 182 TPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAV 261 (388)
Q Consensus 182 ~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (388)
++++++|.+++++..
T Consensus 229 ~~~~~~l~~~~~~~~----------------------------------------------------------------- 243 (330)
T 1yg9_A 229 KAYVNPINEAIGCVV----------------------------------------------------------------- 243 (330)
T ss_dssp HHHHHHHHHHHTCEE-----------------------------------------------------------------
T ss_pred HHHHHHHHHHhCCcc-----------------------------------------------------------------
Confidence 999999999996541
Q ss_pred cchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCC--ce-eecCCCCCCCCcEEEEECCEEEEeCcccceeeecc
Q 016523 262 CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMG--ES-IIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGE 338 (388)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~--~~-~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~ 338 (388)
...| .| .+||+....+|+|+|+|+|+.++|+|++|+++.
T Consensus 244 ------------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~-- 285 (330)
T 1yg9_A 244 ------------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN-- 285 (330)
T ss_dssp ------------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE--
T ss_pred ------------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC--
Confidence 0123 57 899998778999999999999999999999976
Q ss_pred CcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 339 GIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 339 ~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
...|++.|+.. +.++.||||++|||++|+|||++++|||||+++
T Consensus 286 --~~~C~~~i~~~----~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 286 --GNLCYSGFQPC----GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp --TTEEEESEEEE----TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCcEEEEEEeC----CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 36899999865 234689999999999999999999999999975
No 13
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5e-43 Score=350.84 Aligned_cols=249 Identities=28% Similarity=0.493 Sum_probs=220.3
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEe----eCCccccccCccEEEeeccCccccCCCCchhhhhhhcC
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATR----EGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQG 98 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~----~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg 98 (388)
.|+|+.+.+.|.++.|+|+++ ++++++ .||+++. ++ .|....+|||||||++.++....+|++++|++||
T Consensus 122 ~i~Yg~Gs~~G~~~~Dtv~ig---~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg 195 (375)
T 1miq_A 122 DITYGSGTVKGFFSKDLVTLG---HLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQN 195 (375)
T ss_dssp EEEETTEEEEEEEEEEEEEET---TEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTT
T ss_pred EEEeCCCeEEEEEEEEEEEEc---CceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhcc
Confidence 678888889999999999999 899999 9999998 54 4656678999999999998878889999999999
Q ss_pred CCCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCc
Q 016523 99 LVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLL 178 (388)
Q Consensus 99 ~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i 178 (388)
+|++++||+||.+.+. ..|.|+|||+|++++.|++.|+|+.+.+||.|.++ |+++++.+ .+..+++||||+++
T Consensus 196 ~i~~~~FS~~L~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~ 268 (375)
T 1miq_A 196 KIDNALFTFYLPVHDV--HAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTI 268 (375)
T ss_dssp SSSSSEEEEECCTTCT--TEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSE
T ss_pred CcCCCEEEEEecCCCC--CCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccE
Confidence 9999999999998732 58999999999999999999999999999999999 99999876 45689999999999
Q ss_pred ccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCC
Q 016523 179 AGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGD 258 (388)
Q Consensus 179 ~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (388)
++|++++++|.+++++..
T Consensus 269 ~lP~~~~~~l~~~~~~~~-------------------------------------------------------------- 286 (375)
T 1miq_A 269 TAPSEFLNKFFANLNVIK-------------------------------------------------------------- 286 (375)
T ss_dssp EECHHHHHHHHHHHTCEE--------------------------------------------------------------
T ss_pred EcCHHHHHHHHHHhCCcc--------------------------------------------------------------
Confidence 999999999999996530
Q ss_pred CcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeecc
Q 016523 259 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGE 338 (388)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~ 338 (388)
+...+.|.++|.. ..+|+|+|+|+|..++|+|++|+++...
T Consensus 287 --------------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~ 327 (375)
T 1miq_A 287 --------------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILE 327 (375)
T ss_dssp --------------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSS
T ss_pred --------------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccC
Confidence 1234568999997 7899999999999999999999998654
Q ss_pred CcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 339 GIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 339 ~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
.+...|+++|++.+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 328 ~g~~~C~~~~~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 328 VDDTLCMITMLPVDID---SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp SSCSEEEESEEECCSS---SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEEEECCCC---CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 3346899999876532 2689999999999999999999999999975
No 14
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1e-42 Score=341.00 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=214.2
Q ss_pred eEEeeeeE-EEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCcccc---CCCCchhhhhhhcC
Q 016523 23 RIRCVLVL-IVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQG 98 (388)
Q Consensus 23 ~~~~~~~~-~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg 98 (388)
.|+|+.+. +.|.++.|+|+++ ++++++|.||+++.+.+..+....+|||||||++.++. ...++++++|++|
T Consensus 71 ~i~Yg~Gs~~~G~~~~D~v~ig---~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~- 146 (325)
T 1ibq_A 71 DISYGDGSSASGDVYRDTVTVG---GVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ- 146 (325)
T ss_dssp EEECSSSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG-
T ss_pred EEEeCCCCEEEEEEEEeEEEEC---CEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh-
Confidence 68888875 8999999999999 89999999999998765434345789999999998775 3578899999987
Q ss_pred CCCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeec-ccceeEEEEccEEEcCeeeceecCCceEEEcCCCcC
Q 016523 99 LVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSL 177 (388)
Q Consensus 99 ~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~ 177 (388)
+++++||+||.++ ..|+|+|||+|++++.|++.|+|+. +.+||.|.+++|+++++.+. ..+..+++||||++
T Consensus 147 -i~~~~FS~~l~~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~ 219 (325)
T 1ibq_A 147 -LDSPLFAVQLKHD----APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS--SSGFSAIADTGTTL 219 (325)
T ss_dssp -SSSSEEEEEEETT----EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB--SCCEEEEECTTCCS
T ss_pred -cCCcEEEEEecCC----CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc--CCCceEEEeCCCCc
Confidence 8899999999975 3899999999999999999999997 67899999999999998753 56788999999999
Q ss_pred cccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCC
Q 016523 178 LAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAG 257 (388)
Q Consensus 178 i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 257 (388)
+++|++++++|.+++.+..
T Consensus 220 ~~lP~~~~~~i~~~i~~a~------------------------------------------------------------- 238 (325)
T 1ibq_A 220 ILLDDEIVSAYYEQVSGAQ------------------------------------------------------------- 238 (325)
T ss_dssp EEECHHHHHHHHTTSTTCB-------------------------------------------------------------
T ss_pred EeCCHHHHHHHHHhCCCce-------------------------------------------------------------
Confidence 9999999999999885430
Q ss_pred CCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeec
Q 016523 258 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTG 337 (388)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~ 337 (388)
.+...+.|.++|+. ++|+|+|+|+|+.++|++++|+++..
T Consensus 239 --------------------------------------~~~~~g~~~~~C~~--~~P~i~f~fgg~~~~i~~~~~~~~~~ 278 (325)
T 1ibq_A 239 --------------------------------------ESYEAGGYVFSCST--DLPDFTVVIGDYKAVVPGKYINYAPV 278 (325)
T ss_dssp --------------------------------------CCSSSSSCEEETTC--CCCCEEEEETTEEEEECHHHHEEEES
T ss_pred --------------------------------------EcCcCCeEEEEcCC--CCCcEEEEECCEEEEECHHHhccccc
Confidence 01224568899984 79999999999999999999998754
Q ss_pred cCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 338 EGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 338 ~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
+.+...|++.|+..+ .++.||||++|||++|+|||++++|||||++|
T Consensus 279 ~~~~~~C~~~i~~~~----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 279 STGSSTCYGGIQSNS----GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp STTCSEEEESEEECT----TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCCeEEEEEEcCC----CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 323468999888642 34689999999999999999999999999986
No 15
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1e-42 Score=357.31 Aligned_cols=249 Identities=24% Similarity=0.437 Sum_probs=222.0
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEe----eCCccccccCccEEEeeccCccccCCCCchhhhhhhcC
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATR----EGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQG 98 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~----~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg 98 (388)
.|.|+.+.+.|.++.|+|+++ +++++ |.||+++. +++ |.....|||||||++.++..+.+|++++|++||
T Consensus 197 ~i~YgdGs~~G~~~~Dtv~ig---g~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg 270 (451)
T 3qvc_A 197 KLTSKAGTISGIFSKDLVTIG---KLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQN 270 (451)
T ss_dssp EEECSSEEEEEEEEEEEEEET---TEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTT
T ss_pred EEEECCCEEEEEEEEEEEEEC---CEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcC
Confidence 688898999999999999999 89999 99999998 654 666678999999999998877889999999999
Q ss_pred CCCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCc
Q 016523 99 LVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLL 178 (388)
Q Consensus 99 ~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i 178 (388)
+|++++||+||++.. ...|+|+|||+|++++.|+++|+|+.+.+||.+.++ |+++++ +..+..+++||||+++
T Consensus 271 ~I~~~~FS~~L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i 343 (451)
T 3qvc_A 271 KIEQAVYSIYLPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVI 343 (451)
T ss_dssp SSSSSEEEEECCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSE
T ss_pred CCCCCEEEEEEcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccc
Confidence 999999999999873 248999999999999999999999999999999999 999998 3456789999999999
Q ss_pred ccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCC
Q 016523 179 AGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGD 258 (388)
Q Consensus 179 ~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (388)
++|++++++|.+++++..
T Consensus 344 ~lP~~~~~~i~~~i~a~~-------------------------------------------------------------- 361 (451)
T 3qvc_A 344 TVPTEFFNQFVESASVFK-------------------------------------------------------------- 361 (451)
T ss_dssp EECHHHHHHHHTTTTCEE--------------------------------------------------------------
T ss_pred cCCHHHHHHHHHHcCCee--------------------------------------------------------------
Confidence 999999999999996541
Q ss_pred CcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeecc
Q 016523 259 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGE 338 (388)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~ 338 (388)
....+.|.+||+ ..++|+|+|+|+|..++|+|++|+.+..+
T Consensus 362 --------------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~ 402 (451)
T 3qvc_A 362 --------------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLEN 402 (451)
T ss_dssp --------------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTT
T ss_pred --------------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeeccc
Confidence 122467999999 77899999999999999999999998765
Q ss_pred CcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 339 GIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 339 ~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
.....|++.|++.+.+ ++.||||++|||++|+|||++++|||||+++
T Consensus 403 ~~~~~C~~~i~~~~~~---~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 403 IFSALCMLNIVPIDLE---KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp TSTTEEEECEEECCCS---TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 4567899999876421 4789999999999999999999999999985
No 16
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.6e-42 Score=339.71 Aligned_cols=247 Identities=25% Similarity=0.329 Sum_probs=212.3
Q ss_pred eEEeeeeE-EEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCcccc---CCCCchhhhhhhcC
Q 016523 23 RIRCVLVL-IVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQG 98 (388)
Q Consensus 23 ~~~~~~~~-~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg 98 (388)
.|+|+.+. +.|.++.|+|+++ ++++++|.||+++.+.+..+....+|||||||++.++. ...++++++|++|
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig---~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~- 147 (323)
T 1izd_A 72 SISYGDGSSASGDVYKDKVTVG---GVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS- 147 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG-
T ss_pred EEEcCCCCeEEEEEEEEEEEEC---CEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh-
Confidence 57777775 8999999999999 89999999999998766434345789999999998875 3578899999988
Q ss_pred CCCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeec-ccceeEEEEccEEEcCeeeceecCCceEEEcCCCcC
Q 016523 99 LVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSL 177 (388)
Q Consensus 99 ~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~ 177 (388)
+++++||+||.++ ..|+|+|||+|++++.|++.|+|+. +.+||.|.+++|++++ .+ +..+..+++||||++
T Consensus 148 -i~~~~FS~~L~~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~ 219 (323)
T 1izd_A 148 -LSEPIFAVALKHN----APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTL 219 (323)
T ss_dssp -SSSSEEEEECCTT----SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCS
T ss_pred -ccCcEEEEEccCC----CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcc
Confidence 8899999999875 3899999999999999999999996 6789999999999999 44 467789999999999
Q ss_pred cccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCC
Q 016523 178 LAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAG 257 (388)
Q Consensus 178 i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 257 (388)
+++|++++++|.+++.+.. |
T Consensus 220 ~~lp~~~~~~i~~~i~ga~------------~------------------------------------------------ 239 (323)
T 1izd_A 220 LLLDDSIVDAYYEQVNGAS------------Y------------------------------------------------ 239 (323)
T ss_dssp EEECHHHHHHHHTTSTTCE------------E------------------------------------------------
T ss_pred eeCCHHHHHHHHHhCCCcE------------E------------------------------------------------
Confidence 9999999999999885431 0
Q ss_pred CCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeec
Q 016523 258 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTG 337 (388)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~ 337 (388)
+...+.|.++|+. .+|+|+|+|+|+.++|++++|+++..
T Consensus 240 ---------------------------------------~~~~g~~~~~C~~--~~P~i~f~fgg~~~~i~~~~~~~~~~ 278 (323)
T 1izd_A 240 ---------------------------------------DSSQGGYVFPSSA--SLPDFSVTIGDYTATVPGEYISFADV 278 (323)
T ss_dssp ---------------------------------------ETTTTEEEEETTC--CCCCEEEEETTEEEEECHHHHEEEEC
T ss_pred ---------------------------------------cCcCCEEEEECCC--CCceEEEEECCEEEecCHHHeEEecC
Confidence 1224568899984 79999999999999999999998753
Q ss_pred cCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 338 EGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 338 ~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
....|++.|+..+ .++.||||++|||++|+|||++++|||||++|
T Consensus 279 --~~~~C~~~i~~~~----~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 279 --GNGQTFGGIQSNS----GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp --STTEEEESEEECT----TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCCeEEEEEEcCC----CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 2468999898653 34689999999999999999999999999986
No 17
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.9e-43 Score=346.76 Aligned_cols=253 Identities=22% Similarity=0.350 Sum_probs=219.8
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCC-----ccccccCccEEEeeccCccccCC------CCchh
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGS-----LTFLLARFDGIIGLGFREIAVGD------AVPVW 91 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~-----~~f~~~~~dGIlGLg~~~~s~~~------~~~~~ 91 (388)
.|+|+.+.+.|.++.|+|+++ ++++++|.||+++.+.+ ..|.....|||||||++.++... .++++
T Consensus 79 ~i~Yg~Gs~~G~~~~D~v~~g---~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~ 155 (361)
T 1mpp_A 79 NITYGTGGANGIYFRDSITVG---GATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVH 155 (361)
T ss_dssp EEECSSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHH
T ss_pred EEEECCceEEEEEEEEEEEEC---CEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHH
Confidence 678888888999999999999 89999999999998766 45666778999999999887544 78899
Q ss_pred hhhhhcCCCCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccc----eeEEEEccEEEcCeeeceecCCc
Q 016523 92 DNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKG----YWQFELGDILIGNQSTGVCEGGC 167 (388)
Q Consensus 92 ~~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~----~w~v~l~~i~vgg~~~~~~~~~~ 167 (388)
++|++||+|++++||+||.+. ...|.|+|||+|++++.|++.|+|+.+.. ||.|.+++|+++++.+. +..+.
T Consensus 156 ~~l~~~g~i~~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~ 231 (361)
T 1mpp_A 156 VNLYKQGLISSPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGA 231 (361)
T ss_dssp HHHHHTTSSSSSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEE
T ss_pred HHHHHcCCCCCcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCC
Confidence 999999999999999999986 24899999999999999999999998765 99999999999998764 33567
Q ss_pred eEE-EcCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccce
Q 016523 168 AAI-VDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIK 246 (388)
Q Consensus 168 ~ai-vDSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~ 246 (388)
.++ |||||+++++|++++++|.+++++..
T Consensus 232 ~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~-------------------------------------------------- 261 (361)
T 1mpp_A 232 QAFTIDTGTNFFIAPSSFAEKVVKAALPDA-------------------------------------------------- 261 (361)
T ss_dssp EEEEEETTCCSEEEEHHHHHHHHHHHCTTC--------------------------------------------------
T ss_pred EEEEECCCCCceeCCHHHHHHHHHHhCCcc--------------------------------------------------
Confidence 899 99999999999999999999996530
Q ss_pred eeeecccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCC-CcEEEEE--C--
Q 016523 247 TVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTM-PNVSFTI--G-- 321 (388)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~l-P~i~f~~--g-- 321 (388)
+...+.|.++|..+.++ |+|+|+| +
T Consensus 262 --------------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~ 291 (361)
T 1mpp_A 262 --------------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGS 291 (361)
T ss_dssp --------------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTC
T ss_pred --------------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCc
Confidence 11245688999877788 9999999 8
Q ss_pred ---CEEEEeCcccceeeeccCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 322 ---DKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 322 ---g~~~~l~p~~yi~~~~~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
|..++|+|++|+++... ....|+++|+.. .++.||||++|||++|+|||++++|||||+++
T Consensus 292 ~~~g~~~~i~~~~y~~~~~~-~~~~C~~~i~~~-----~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 292 SSDTIDVSVPISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp SSCEEEEEEEGGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCeEEEECHHHhEEecCC-CCCeeEEEEEeC-----CCCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 89999999999998643 245899999864 23679999999999999999999999999975
No 18
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.4e-42 Score=339.83 Aligned_cols=247 Identities=22% Similarity=0.329 Sum_probs=211.4
Q ss_pred eEEeeeeE-EEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccC---CCCchhhhhhhcC
Q 016523 23 RIRCVLVL-IVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVG---DAVPVWDNMVEQG 98 (388)
Q Consensus 23 ~~~~~~~~-~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~---~~~~~~~~L~~qg 98 (388)
.|+|+.+. +.|.++.|+|+++ ++++++|.||+++.+++..+.....|||||||++.++.. ..++++++|++|
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig---~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~- 147 (323)
T 1bxo_A 72 SISYGDGSSASGNVFTDSVTVG---GVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS- 147 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG-
T ss_pred EEEeCCCCeEEEEEEEEEEEEC---CEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh-
Confidence 67888775 8999999999999 899999999999987654343457899999999987752 567899999987
Q ss_pred CCCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeec-ccceeEEEEccEEEcCeeeceecCCceEEEcCCCcC
Q 016523 99 LVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSL 177 (388)
Q Consensus 99 ~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~ 177 (388)
|++++||+||.++ ..|+|+|||+|+++++|++.|+|+. +.+||.|.+++|++++ . +..+..+++||||++
T Consensus 148 -i~~~~FS~~L~~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~---~~~~~~aiiDSGTs~ 218 (323)
T 1bxo_A 148 -LAQPLFAVALKHQ----QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-Q---SGDGFSGIADTGTTL 218 (323)
T ss_dssp -BSSSEEEEECCSS----SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-E---EEEEEEEEECTTCSS
T ss_pred -cCCcEEEEEEeCC----CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-c---cCCCceEEEeCCCCc
Confidence 8999999999874 3899999999999999999999996 6789999999999999 2 345678999999999
Q ss_pred cccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCC
Q 016523 178 LAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAG 257 (388)
Q Consensus 178 i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 257 (388)
+++|++++++|.+++++.. |
T Consensus 219 ~~lP~~~~~~l~~~i~~a~------------~------------------------------------------------ 238 (323)
T 1bxo_A 219 LLLDDSVVSQYYSQVSGAQ------------Q------------------------------------------------ 238 (323)
T ss_dssp EEECHHHHHHHHTTSTTCE------------E------------------------------------------------
T ss_pred eeCCHHHHHHHHHhCCCce------------E------------------------------------------------
Confidence 9999999999999985431 0
Q ss_pred CCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeec
Q 016523 258 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTG 337 (388)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~ 337 (388)
+...+.|.++|+. ++|+|+|+|+|..++|++++|+++..
T Consensus 239 ---------------------------------------~~~~g~~~~~C~~--~~P~i~f~fgg~~~~l~~~~~~~~~~ 277 (323)
T 1bxo_A 239 ---------------------------------------DSNAGGYVFDCST--NLPDFSVSISGYTATVPGSLINYGPS 277 (323)
T ss_dssp ---------------------------------------ETTTTEEEECTTC--CCCCEEEEETTEEEEECHHHHEEEEC
T ss_pred ---------------------------------------cCcCCEEEEECCC--CCceEEEEECCEEEEECHHHeEEecc
Confidence 1234568899994 79999999999999999999998754
Q ss_pred cCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 338 EGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 338 ~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
. ....|++.|+..+ .++.||||++|||++|+|||++++|||||++|
T Consensus 278 ~-~~~~C~~~i~~~~----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 278 G-DGSTCLGGIQSNS----GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp S-SSSCEEESEEECT----TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred C-CCCeEEEEEECCC----CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 2 3468999998653 34689999999999999999999999999986
No 19
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.4e-42 Score=339.75 Aligned_cols=255 Identities=24% Similarity=0.350 Sum_probs=216.1
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCcccc--------CCCCchhhhh
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAV--------GDAVPVWDNM 94 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~--------~~~~~~~~~L 94 (388)
.|+|+.+.+.|.++.|+|+++ ++++++|.||+++.+.+ | ..+|||||||++.++. ...++++++|
T Consensus 60 ~i~Yg~Gs~~G~~~~Dtv~~g---~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l 132 (340)
T 1wkr_A 60 SVTYGSGSFSGTEYTDTVTLG---SLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNL 132 (340)
T ss_dssp EEECSSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHH
T ss_pred EEEECCcEEEEEEEEEEEEEC---CEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHH
Confidence 678888889999999999999 89999999999998754 3 2579999999998775 3567899999
Q ss_pred hhcCCCCcceEEEEecCCC-CCCCCcEEEECCCCCCceecceeEeeecc----cceeEEEEccEEEcC-eeeceecCCce
Q 016523 95 VEQGLVSEEVFSFWLNRDP-DAEEGGEIVFGGVDPKHFKGKHTYVPVTK----KGYWQFELGDILIGN-QSTGVCEGGCA 168 (388)
Q Consensus 95 ~~qg~i~~~~FSl~L~~~~-~~~~~G~L~fGgid~~~~~g~l~~~pv~~----~~~w~v~l~~i~vgg-~~~~~~~~~~~ 168 (388)
++||+|++++||+||.+.. +....|.|+|||+|++++.|++.|+|+.+ .+||.+. .+|++++ +.+. .+..
T Consensus 133 ~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~ 208 (340)
T 1wkr_A 133 FSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTA 208 (340)
T ss_dssp HHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEE
T ss_pred HHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCe
Confidence 9999999999999998742 12347999999999999999999999987 7899999 9999998 7663 3457
Q ss_pred EEEcCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceee
Q 016523 169 AIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTV 248 (388)
Q Consensus 169 aivDSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~ 248 (388)
+++||||+++++|++++++|.+++++..
T Consensus 209 aiiDSGTt~~~lP~~~~~~l~~~~~a~~---------------------------------------------------- 236 (340)
T 1wkr_A 209 GIVDTGTTLTLIASDAFAKYKKATGAVA---------------------------------------------------- 236 (340)
T ss_dssp EEECTTBCSEEECHHHHHHHHHHHTCEE----------------------------------------------------
T ss_pred EEEeCCcccccCCHHHHHHHHHhhCCEE----------------------------------------------------
Confidence 9999999999999999999988886530
Q ss_pred eecccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeC
Q 016523 249 VEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLS 328 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~ 328 (388)
....+.|.+||+...++|+|+|.|+|..++|+
T Consensus 237 ------------------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~ 268 (340)
T 1wkr_A 237 ------------------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELT 268 (340)
T ss_dssp ------------------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEEC
T ss_pred ------------------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEc
Confidence 12345688999866689999999999999999
Q ss_pred cccceeeecc-----CcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 329 PEQYILKTGE-----GIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 329 p~~yi~~~~~-----~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
|++|+++... +....|++.|...+.+...++.||||++|||++|+|||++++|||||+++
T Consensus 269 ~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 333 (340)
T 1wkr_A 269 ANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS 333 (340)
T ss_dssp TGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred HHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecC
Confidence 9999987542 12467999898765433345679999999999999999999999999974
No 20
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3.8e-42 Score=353.42 Aligned_cols=250 Identities=27% Similarity=0.496 Sum_probs=219.9
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeC--CccccccCccEEEeeccCccccCCCCchhhhhhhcCCC
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREG--SLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLV 100 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~--~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i 100 (388)
.|+|+.+.++|.++.|+|+++ +++++ |.||+++.++ +..|.....|||||||+++++....+|++++|++||+|
T Consensus 198 ~i~YgdGs~~G~~~~Dtv~ig---~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i 273 (453)
T 2bju_A 198 EMNYVSGTVSGFFSKDLVTVG---NLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKI 273 (453)
T ss_dssp EEECSSSEEEEEEEEEEEEET---TEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSS
T ss_pred EEEcCCCCeEEEEEEEEEEEe---CcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCC
Confidence 688888889999999999999 89999 9999999976 55566677899999999999887888999999999999
Q ss_pred CcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCccc
Q 016523 101 SEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAG 180 (388)
Q Consensus 101 ~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~l 180 (388)
++++||+||++.+ ...|.|+|||+|++++.|++.|+|+.+.+||.|.++ |++++. + + .+..+++||||+++++
T Consensus 274 ~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg~-~--~-~~~~aIiDSGTsl~~l 346 (453)
T 2bju_A 274 ENALFTFYLPVHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGNI-M--L-EKANCIVDSGTSAITV 346 (453)
T ss_dssp SSCEEEEECCBTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETTE-E--E-EEEEEEECTTCCSEEE
T ss_pred CCCEEEEEeCCCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECcE-E--e-ccccEEEcCCCCeEec
Confidence 9999999999873 358999999999999999999999999999999999 999993 3 3 5678999999999999
Q ss_pred CHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCc
Q 016523 181 PTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSA 260 (388)
Q Consensus 181 P~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (388)
|++++++|.+++++.
T Consensus 347 P~~~~~~l~~~i~~~----------------------------------------------------------------- 361 (453)
T 2bju_A 347 PTDFLNKMLQNLDVI----------------------------------------------------------------- 361 (453)
T ss_dssp CHHHHHHHTTTSSCE-----------------------------------------------------------------
T ss_pred CHHHHHHHHHHhCCc-----------------------------------------------------------------
Confidence 999999998888543
Q ss_pred ccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCC-ceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccC
Q 016523 261 VCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMG-ESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEG 339 (388)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~-~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~ 339 (388)
+...| .|.++|+. ..+|+|+|+|+|..++|+|++|+++....
T Consensus 362 ------------------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~ 404 (453)
T 2bju_A 362 ------------------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDV 404 (453)
T ss_dssp ------------------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTT
T ss_pred ------------------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccC
Confidence 11234 68899997 78999999999999999999999986543
Q ss_pred cccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 340 IAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 340 ~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
+...|+++|++.+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 405 g~~~C~~~~~~~~~~---~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 405 GPGLCMLNIIGLDFP---VPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp STTEEEECEEECCCS---SCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCceEEEEEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 456899999876532 3589999999999999999999999999975
No 21
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.4e-41 Score=333.60 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=212.2
Q ss_pred eEEeeeeE-EEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCcccc---CCCCchhhhhhhcC
Q 016523 23 RIRCVLVL-IVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQG 98 (388)
Q Consensus 23 ~~~~~~~~-~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg 98 (388)
.|+|+.+. +.|.++.|+|+++ ++++++|.||+++.+.+..+.....|||||||++.++. ...++++++|++|
T Consensus 76 ~i~Yg~Gs~~~G~~~~D~v~ig---~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~- 151 (329)
T 3c9x_A 76 SISYGDGSSSSGDVYTDKVTIG---GFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS- 151 (329)
T ss_dssp EEECTTSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT-
T ss_pred EEEeCCCCcEEEEEEEEEEEEC---CEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh-
Confidence 67888775 8999999999999 89999999999998765433335789999999998775 2467899999987
Q ss_pred CCCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeec-ccceeEEEEccEEEcCeeeceecCCceEEEcCCCcC
Q 016523 99 LVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSL 177 (388)
Q Consensus 99 ~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~ 177 (388)
|++++||+||.++ ..|.|+|||+|++++.|++.|+|+. +.+||.|.+++|+++++.+. ..+..+++||||++
T Consensus 152 -i~~~~FS~~l~~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~ 224 (329)
T 3c9x_A 152 -LAEPLFTADLRHG----QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN--RNSIDGIADTGTTL 224 (329)
T ss_dssp -SSSSEEEEECCSS----SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--SCCEEEEECTTCCS
T ss_pred -cCCCEEEEEecCC----CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--CCCceEEEECCCCc
Confidence 8899999999874 3899999999999999999999997 57899999999999998763 56788999999999
Q ss_pred cccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCC
Q 016523 178 LAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAG 257 (388)
Q Consensus 178 i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 257 (388)
+++|++++++|.+++.+.. |
T Consensus 225 ~~lp~~~~~~i~~~i~~a~------------~------------------------------------------------ 244 (329)
T 3c9x_A 225 LLLDDNVVDAYYANVQSAQ------------Y------------------------------------------------ 244 (329)
T ss_dssp EEECHHHHHHHHTTCTTCE------------E------------------------------------------------
T ss_pred EeCCHHHHHHHHHhCCCcE------------E------------------------------------------------
Confidence 9999999999999885431 0
Q ss_pred CCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeec
Q 016523 258 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTG 337 (388)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~ 337 (388)
+...+.|.++|. ..+|+|+|+|+|..++|++++|+++..
T Consensus 245 ---------------------------------------~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~ 283 (329)
T 3c9x_A 245 ---------------------------------------DNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPL 283 (329)
T ss_dssp ---------------------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEES
T ss_pred ---------------------------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeecc
Confidence 112456889998 379999999999999999999998754
Q ss_pred cCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEec
Q 016523 338 EGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 387 (388)
Q Consensus 338 ~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~ 387 (388)
+.....|++.|+..+ ..+.||||++|||++|+|||++++|||||+.
T Consensus 284 ~~~~~~C~~~i~~~~----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 284 EEGSSTCFGGLQSSS----GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp STTCSEEEESEEECT----TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCCCCeEEEEEEcCC----CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 333468999888642 3468999999999999999999999999984
No 22
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.1e-41 Score=334.35 Aligned_cols=249 Identities=21% Similarity=0.304 Sum_probs=211.7
Q ss_pred eEEeeeeE-EEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCcccc---CCCCchhhhhhhcC
Q 016523 23 RIRCVLVL-IVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQG 98 (388)
Q Consensus 23 ~~~~~~~~-~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg 98 (388)
.|+|+.+. +.|.++.|+|+++ ++++++|.||+++.+.+..+.....|||||||++.++. ...++++++|++|
T Consensus 75 ~i~Yg~Gs~~~G~~~~D~v~~g---~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~- 150 (329)
T 1oew_A 75 SISYGDGSSSSGDVYTDTVSVG---GLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS- 150 (329)
T ss_dssp EEECTTSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT-
T ss_pred EEEeCCCCcEEEEEEEEEEEEC---CEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh-
Confidence 67787775 8999999999999 89999999999998765433335789999999998775 2467899999987
Q ss_pred CCCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeec-ccceeEEEEccEEEcCeeeceecCCceEEEcCCCcC
Q 016523 99 LVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSL 177 (388)
Q Consensus 99 ~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~ 177 (388)
|++++||+||.+. ..|+|+|||+|++++.|++.|+|+. +.+||.|.+++|+++++.+. ..+..+++||||++
T Consensus 151 -i~~~~FS~~L~~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~ 223 (329)
T 1oew_A 151 -LDSPVFTADLGYH----APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTL 223 (329)
T ss_dssp -SSSSEEEEECCSS----SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCS
T ss_pred -ccCcEEEEEccCC----CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCC
Confidence 8899999999874 3899999999999999999999997 67899999999999998653 45678999999999
Q ss_pred cccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCC
Q 016523 178 LAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAG 257 (388)
Q Consensus 178 i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 257 (388)
+++|++++++|.+++.+.. |
T Consensus 224 ~~lP~~~~~~l~~~i~~a~------------~------------------------------------------------ 243 (329)
T 1oew_A 224 LYLPATVVSAYWAQVSGAK------------S------------------------------------------------ 243 (329)
T ss_dssp EEECHHHHHHHHTTSTTCE------------E------------------------------------------------
T ss_pred EECCHHHHHHHHHhCCCcE------------E------------------------------------------------
Confidence 9999999999999885431 0
Q ss_pred CCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeec
Q 016523 258 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTG 337 (388)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~ 337 (388)
+...+.|.++|.. .+|+|+|+|+|..++|++++|+++..
T Consensus 244 ---------------------------------------~~~~g~~~~~C~~--~~P~i~f~fgg~~~~ip~~~~~~~~~ 282 (329)
T 1oew_A 244 ---------------------------------------SSSVGGYVFPCSA--TLPSFTFGVGSARIVIPGDYIDFGPI 282 (329)
T ss_dssp ---------------------------------------ETTTTEEEEETTC--CCCCEEEEETTEEEEECHHHHEEEES
T ss_pred ---------------------------------------cCCCCEEEEECCC--CCCcEEEEECCEEEEECHHHeeeeec
Confidence 1224568899983 79999999999999999999998754
Q ss_pred cCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeC-CCCeEEEEec
Q 016523 338 EGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDS-GKLRIGFAEA 387 (388)
Q Consensus 338 ~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~-~~~rIGfA~~ 387 (388)
......|++.|+..+ ..+.||||++|||++|+|||+ +++|||||+.
T Consensus 283 ~~~~~~C~~~i~~~~----~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 283 STGSSSCFGGIQSSA----GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp STTCSEEEESEEEST----TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCCCeEEEEEEeCC----CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 333468999888643 346899999999999999999 9999999984
No 23
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.7e-41 Score=330.93 Aligned_cols=248 Identities=29% Similarity=0.479 Sum_probs=212.4
Q ss_pred eEEeeee-EEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCcccc-CCCCchhhhhhhcCCC
Q 016523 23 RIRCVLV-LIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAV-GDAVPVWDNMVEQGLV 100 (388)
Q Consensus 23 ~~~~~~~-~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~-~~~~~~~~~L~~qg~i 100 (388)
.|+|+.+ .+.|.++.|+|+++ ++++++|.||+++.+.+. |.....|||||||++.++. ...++++++|++||+|
T Consensus 74 ~i~Yg~Gs~~~G~~~~D~v~~g---~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i 149 (325)
T 2apr_A 74 SISYGDGSSASGILAKDNVNLG---GLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLI 149 (325)
T ss_dssp EEECTTSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSC
T ss_pred EEEECCCCCEEEEEEEEEEEEC---CEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCC
Confidence 5778777 48999999999999 899999999999987653 6556689999999998874 3577899999999999
Q ss_pred CcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeec-ccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcc
Q 016523 101 SEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLA 179 (388)
Q Consensus 101 ~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~ 179 (388)
++++||+||.+... ...|.|+|||+|++++.|++.|+|+. +.+||.|.+++|++++ .+ +..+..+++||||++++
T Consensus 150 ~~~~FS~~l~~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~ 225 (325)
T 2apr_A 150 SRPIFGVYLGKAKN-GGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLI 225 (325)
T ss_dssp SSSEEEEEECCGGG-TCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEE
T ss_pred CCceEEEEecCCCC-CCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEE
Confidence 99999999976421 25899999999999999999999996 5789999999999999 33 35678999999999999
Q ss_pred cCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCC
Q 016523 180 GPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS 259 (388)
Q Consensus 180 lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (388)
+|+++++++.+++.+.-
T Consensus 226 lP~~~~~~~~~~~~~~~--------------------------------------------------------------- 242 (325)
T 2apr_A 226 LPNNIAASVARAYGASD--------------------------------------------------------------- 242 (325)
T ss_dssp EEHHHHHHHHHHHTCEE---------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHhccc---------------------------------------------------------------
Confidence 99999999999985430
Q ss_pred cccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccC
Q 016523 260 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEG 339 (388)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~ 339 (388)
+. .+.|.++|+. ..+|+|+|+|+|..++|++++|+++..
T Consensus 243 -------------------------------------~~-~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~-- 281 (325)
T 2apr_A 243 -------------------------------------NG-DGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF-- 281 (325)
T ss_dssp -------------------------------------CS-SSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE--
T ss_pred -------------------------------------CC-CCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC--
Confidence 11 1558899985 348999999998899999999998654
Q ss_pred cccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 340 IAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 340 ~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
...|++.|+..+ .+.||||++|||++|+|||++++|||||+++
T Consensus 282 -~~~C~~~i~~~~-----~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 282 -QGQCIAGFGYGN-----WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp -TTEEEESEEEES-----SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -CCeEEEEEEcCC-----CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 468999988653 3679999999999999999999999999985
No 24
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.3e-40 Score=324.80 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=210.1
Q ss_pred eEEeeee-EEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCcccc----------CCCCchh
Q 016523 23 RIRCVLV-LIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAV----------GDAVPVW 91 (388)
Q Consensus 23 ~~~~~~~-~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~----------~~~~~~~ 91 (388)
.|.|+.+ .+.|.++.|+|+++ ++++++|.||+++...+ .+||||||++.++. ...++++
T Consensus 75 ~i~Yg~gs~~~G~~~~D~v~~g---~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~ 144 (339)
T 3fv3_A 75 TIRYGDGSTSQGTWGKDTVTIN---GVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVP 144 (339)
T ss_dssp EEECTTSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHH
T ss_pred EEEECCCceEEEEEEEEEEEEC---CEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHH
Confidence 6778888 89999999999999 89999999999998653 49999999998763 2356799
Q ss_pred hhhhhcCCCCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEE
Q 016523 92 DNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIV 171 (388)
Q Consensus 92 ~~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiv 171 (388)
++|++||+|++++||+||.+... ..|+|+|||+|++++.|+++|+|+....+|.|++++|.++++.+.. +..+++
T Consensus 145 ~~L~~~g~i~~~~fsl~l~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~ii 219 (339)
T 3fv3_A 145 VTLKKQGKIRTNAYSLYLNSPSA--ETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALL 219 (339)
T ss_dssp HHHHHTTSCSSSEEEEECCCTTC--SEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEE
T ss_pred HHHHHCCCCCCceEEEEECCCCC--CCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEE
Confidence 99999999999999999987642 4899999999999999999999999989999999999999998753 367999
Q ss_pred cCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeec
Q 016523 172 DSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEK 251 (388)
Q Consensus 172 DSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~ 251 (388)
||||+++++|++++++|.+++++.. .
T Consensus 220 DSGtt~~~lP~~~~~~i~~~~~~~~-------------~----------------------------------------- 245 (339)
T 3fv3_A 220 DSGTTLTYFPSDFAAQLADKAGARL-------------V----------------------------------------- 245 (339)
T ss_dssp CTTBSSEEECHHHHHHHHHHHTCEE-------------E-----------------------------------------
T ss_pred eCCCCCEecCHHHHHHHHHHcCCEE-------------c-----------------------------------------
Confidence 9999999999999999999997541 0
Q ss_pred ccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEEC-CEEEEeCcc
Q 016523 252 ENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIG-DKIFNLSPE 330 (388)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~g-g~~~~l~p~ 330 (388)
..+...+.|.++|+. ..+|+|+|+|+ |..++|+++
T Consensus 246 -------------------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~ 281 (339)
T 3fv3_A 246 -------------------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNT 281 (339)
T ss_dssp -------------------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGG
T ss_pred -------------------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHH
Confidence 000124568899996 56899999995 899999999
Q ss_pred cceeeeccCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 331 QYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 331 ~yi~~~~~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
+|+++.. ...|++.|+. .+.||||++|||++|+|||++++|||||+++
T Consensus 282 ~~~~~~~---~~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 282 EYVYQNG---DGTCLWGIQP-------SDDTILGDNFLRHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp GGEEECS---SSCEEESEEE-------CSSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HheeeCC---CCeEEEEEEe-------CCcEEeChHHHhCEEEEEECCCCEEEEEecC
Confidence 9998753 3579999985 2569999999999999999999999999975
No 25
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=5e-40 Score=323.50 Aligned_cols=244 Identities=19% Similarity=0.267 Sum_probs=207.1
Q ss_pred eEEeeee-EEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccC--CCCchhhhhhhcCC
Q 016523 23 RIRCVLV-LIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGL 99 (388)
Q Consensus 23 ~~~~~~~-~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~ 99 (388)
.|+|+.+ .+.|.++.|+|+++ ++++++|.||+++... ..+||||||++.++.. ...+++++|++||+
T Consensus 81 ~i~Yg~Gs~~~G~~~~D~v~~g---~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~ 150 (342)
T 2qzx_A 81 DIKYGDGSYAKGKLYKDTVGIG---GVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGI 150 (342)
T ss_dssp EEECTTSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTS
T ss_pred EEEeCCCCeEEEEEEEEEEEEC---CEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCC
Confidence 5777776 57899999999999 8999999999998753 4699999999987643 35688999999999
Q ss_pred CCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcc
Q 016523 100 VSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLA 179 (388)
Q Consensus 100 i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~ 179 (388)
|++++||+||.+.. ...|.|+|||+|++++.|++.|+|+.+..+|.|.+++|+++++.+. .+..+++||||++++
T Consensus 151 i~~~~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~ 225 (342)
T 2qzx_A 151 IGKAAYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISY 225 (342)
T ss_dssp SSSSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEE
T ss_pred cCccEEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEE
Confidence 99999999998753 2489999999999999999999999988999999999999998875 346799999999999
Q ss_pred cCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCC
Q 016523 180 GPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS 259 (388)
Q Consensus 180 lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (388)
+|++++++|.+++++... |
T Consensus 226 lP~~~~~~l~~~~~~~~~-----------~-------------------------------------------------- 244 (342)
T 2qzx_A 226 FTRSIVRNILYAIGAQMK-----------F-------------------------------------------------- 244 (342)
T ss_dssp ECHHHHHHHHHHHTCEEE-----------E--------------------------------------------------
T ss_pred cCHHHHHHHHHHhCCeee-----------e--------------------------------------------------
Confidence 999999999999976410 0
Q ss_pred cccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEE-CCEEEEeCcccceeeec-
Q 016523 260 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTI-GDKIFNLSPEQYILKTG- 337 (388)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~-gg~~~~l~p~~yi~~~~- 337 (388)
.+...+.|.++|+. +|+|+|+| +|..++|++++|+++..
T Consensus 245 ------------------------------------~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~~~~~~~~ 285 (342)
T 2qzx_A 245 ------------------------------------DSAGNKVYVADCKT---SGTIDFQFGNNLKISVPVSEFLFQTYY 285 (342)
T ss_dssp ------------------------------------CTTSCEEEEECTTC---CCEEEEEETTTEEEEEEGGGGEECCBC
T ss_pred ------------------------------------ccCCCcEEEEECCC---CCcEEEEECCCcEEEEcHHHhcccccc
Confidence 01112368899984 89999999 68999999999998743
Q ss_pred --cCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 338 --EGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 338 --~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
......|++.|+.. +.||||++|||++|+|||++++|||||+++
T Consensus 286 ~~~~~~~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 286 TSGKPFPKCEVRIRES-------EDNILGDNFLRSAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp TTSCBCSSEEESEEEC-------SSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCCccEEEEecC-------CCcEeChHhhhcEEEEEECCCCEEEEEeeC
Confidence 12346799988753 359999999999999999999999999974
No 26
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=7.2e-40 Score=321.69 Aligned_cols=239 Identities=23% Similarity=0.308 Sum_probs=206.1
Q ss_pred eEEeeee-EEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccC--CCCchhhhhhhcCC
Q 016523 23 RIRCVLV-LIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGL 99 (388)
Q Consensus 23 ~~~~~~~-~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~ 99 (388)
.|+|+.+ .+.|.++.|+|+++ ++++++|.||+++... ..|||||||++.++.. ..++++++|++||+
T Consensus 81 ~i~Yg~Gs~~~G~~~~D~v~~g---~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~ 150 (334)
T 1j71_A 81 SIEYGDLTSSQGSFYKDTVGFG---GISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGI 150 (334)
T ss_dssp EEEBTTSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTS
T ss_pred EEEECCCCEEEEEEEEEEEEEC---CEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCC
Confidence 5777776 57899999999999 8999999999998763 4699999999987642 45688999999999
Q ss_pred CCcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcc
Q 016523 100 VSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLA 179 (388)
Q Consensus 100 i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~ 179 (388)
|++++||+||.+.. ...|.|+|||+|++++.|++.|+|+.+..+|.|.+++|+++++.+. .+..+++||||++++
T Consensus 151 i~~~~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~ 225 (334)
T 1j71_A 151 INKNAYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITY 225 (334)
T ss_dssp CSSSEEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEE
T ss_pred CCccEEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEe
Confidence 99999999998753 2489999999999999999999999988999999999999998875 346799999999999
Q ss_pred cCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCC
Q 016523 180 GPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS 259 (388)
Q Consensus 180 lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (388)
+|++++++|.+++++..
T Consensus 226 lP~~~~~~l~~~~~~~~--------------------------------------------------------------- 242 (334)
T 1j71_A 226 FSQSTADKFARIVGATW--------------------------------------------------------------- 242 (334)
T ss_dssp ECHHHHHHHHHHHTCEE---------------------------------------------------------------
T ss_pred cCHHHHHHHHHHcCCcc---------------------------------------------------------------
Confidence 99999999999997540
Q ss_pred cccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCcee-ecCCCCCCCCcEEEEE-CCEEEEeCcccceeeec
Q 016523 260 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESI-IDCDRIPTMPNVSFTI-GDKIFNLSPEQYILKTG 337 (388)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~-v~C~~~~~lP~i~f~~-gg~~~~l~p~~yi~~~~ 337 (388)
+...+.|. ++|+. +|+|+|+| +|..++|+|++|+++..
T Consensus 243 -------------------------------------~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~y~~~~~ 282 (334)
T 1j71_A 243 -------------------------------------DSRNEIYRLPSCDL---SGDAVFNFDQGVKITVPLSELILKDS 282 (334)
T ss_dssp -------------------------------------ETTTTEEECSSSCC---CSEEEEEESTTCEEEEEGGGGEEECS
T ss_pred -------------------------------------cCCCceEEEEcCCC---CCceEEEEcCCcEEEECHHHheeecC
Confidence 01123577 89984 89999999 68999999999999864
Q ss_pred cCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 338 EGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 338 ~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
++ ..|++.|+.. +.||||++|||++|+|||++++|||||+++
T Consensus 283 ~~--~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (334)
T 1j71_A 283 DS--SICYFGISRN-------DANILGDNFLRRAYIVYDLDDKTISLAQVK 324 (334)
T ss_dssp SS--SCEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC--CeeEEEEeEC-------CCcEEChHhhccEEEEEECCCCEEEEEecC
Confidence 32 3599988753 359999999999999999999999999974
No 27
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1e-39 Score=320.34 Aligned_cols=245 Identities=21% Similarity=0.291 Sum_probs=206.1
Q ss_pred eEEeeeeE-EEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccC-CCCchhhhhhhcCCC
Q 016523 23 RIRCVLVL-IVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVG-DAVPVWDNMVEQGLV 100 (388)
Q Consensus 23 ~~~~~~~~-~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~-~~~~~~~~L~~qg~i 100 (388)
.|.|+.+. +.|.++.|+|+++ ++++++|.||+++... ..|||||||++.++.. ..++++++|++||+|
T Consensus 81 ~i~Yg~gs~~~G~~~~D~v~ig---~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i 150 (342)
T 3pvk_A 81 KIGYGDGSSSQGTLYKDTVGFG---GVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVI 150 (342)
T ss_dssp EEECSSSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSS
T ss_pred EEEecCCCeEEEEEEEEEEEEC---CEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCC
Confidence 57788774 8999999999999 8999999999998753 4699999999987643 356799999999999
Q ss_pred CcceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCccc
Q 016523 101 SEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAG 180 (388)
Q Consensus 101 ~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~l 180 (388)
++++||+||++... ..|.|+|||+|++++.|++.|+|+.+..+|.|.+++|.++++.+.. .+..+++||||+++++
T Consensus 151 ~~~~fs~~l~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~l 226 (342)
T 3pvk_A 151 AKNAYSLYLNSPDA--ATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYL 226 (342)
T ss_dssp SSSEEEEECCCTTC--SEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEE
T ss_pred CCceEEEEeCCCCC--CCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeec
Confidence 99999999987532 4799999999999999999999999989999999999999998753 3478999999999999
Q ss_pred CHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeecccccCCCCc
Q 016523 181 PTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSA 260 (388)
Q Consensus 181 P~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (388)
|++++++|.+++++...
T Consensus 227 P~~~~~~i~~~~~~~~~--------------------------------------------------------------- 243 (342)
T 3pvk_A 227 QQDLADQIIKAFNGKLT--------------------------------------------------------------- 243 (342)
T ss_dssp CHHHHHHHHHHTTCEEE---------------------------------------------------------------
T ss_pred CHHHHHHHHHHcCCeec---------------------------------------------------------------
Confidence 99999999999976510
Q ss_pred ccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCCCcEEEEEC-CEEEEeCcccceeeeccC
Q 016523 261 VCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIG-DKIFNLSPEQYILKTGEG 339 (388)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~lP~i~f~~g-g~~~~l~p~~yi~~~~~~ 339 (388)
......+.|.++|+. .|+|+|+|+ |..++|++++|+++....
T Consensus 244 ----------------------------------~~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~vp~~~~~~~~~~~ 286 (342)
T 3pvk_A 244 ----------------------------------QDSNGNSFYEVDCNL---SGDVVFNFSKNAKISVPASEFAASLQGD 286 (342)
T ss_dssp ----------------------------------ECTTSCEEEEECSCC---CSEEEEEESTTCEEEEEGGGGEEC----
T ss_pred ----------------------------------ccCCCceEEEEecCC---CCceEEEECCCCEEEEcHHHheeecccc
Confidence 000112348899995 599999997 899999999999974321
Q ss_pred c---ccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 340 I---AEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 340 ~---~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
. ...|++.|... +.||||++|||++|+|||++++|||||+++
T Consensus 287 ~g~~~~~C~~~i~~~-------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 287 DGQPYDKCQLLFDVN-------DANILGDNFLRSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp ------CEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCcCCeeEEEEeeC-------CCeEeCHHHHhcEEEEEECCCCEEEEEecC
Confidence 1 36799998752 578999999999999999999999999975
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=310.64 Aligned_cols=262 Identities=24% Similarity=0.394 Sum_probs=200.9
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEee-CcEEEEEEeeCCccccccCccEEEeeccCcccc--CCCCchhhhhhhcCC
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFL-LQVFIEATREGSLTFLLARFDGIIGLGFREIAV--GDAVPVWDNMVEQGL 99 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~-~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~--~~~~~~~~~L~~qg~ 99 (388)
.|+|+.+.+.|.++.|+|+++. +..+. .+.|+++....+.......+|||||||++.++. ...++++++|++|+.
T Consensus 69 ~i~Yg~Gs~~G~~~~Dtv~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~ 146 (383)
T 2ewy_A 69 TVKYTQGSWTGFVGEDLVTIPK--GFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQAN 146 (383)
T ss_dssp EEECSSCEEEEEEEEEEEEETT--TEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHT
T ss_pred EEEECCcEEEEEEEEEEEEECC--CccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccC
Confidence 5888888889999999999972 22222 356777765443322234679999999998875 457889999999999
Q ss_pred CCcceEEEEecCC-----CCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecC---CceEEE
Q 016523 100 VSEEVFSFWLNRD-----PDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEG---GCAAIV 171 (388)
Q Consensus 100 i~~~~FSl~L~~~-----~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~---~~~aiv 171 (388)
+ +++||+||++. ......|.|+|||+|++++.|++.|+|+.+..||.|.+++|+|+++.+.+... ...+++
T Consensus 147 i-~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aii 225 (383)
T 2ewy_A 147 I-PNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIV 225 (383)
T ss_dssp C-CSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEE
T ss_pred C-CcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEE
Confidence 9 79999999752 12235899999999999999999999999999999999999999998764322 468999
Q ss_pred cCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeec
Q 016523 172 DSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEK 251 (388)
Q Consensus 172 DSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~ 251 (388)
||||+++++|++++++|.+++++... . +
T Consensus 226 DSGTt~~~lP~~~~~~l~~~i~~~~~-----------------------~-~---------------------------- 253 (383)
T 2ewy_A 226 DSGTTLLRLPQKVFDAVVEAVARASL-----------------------I-P---------------------------- 253 (383)
T ss_dssp CTTCSSEEEEHHHHHHHHHHHHHTTC-----------------------S-S----------------------------
T ss_pred EcCCccccCCHHHHHHHHHHHhhhcc-----------------------c-c----------------------------
Confidence 99999999999999999999964310 0 0
Q ss_pred ccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCC-CceeecCCCC-----CCCCcEEEEECCE--
Q 016523 252 ENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPM-GESIIDCDRI-----PTMPNVSFTIGDK-- 323 (388)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~-~~~~v~C~~~-----~~lP~i~f~~gg~-- 323 (388)
..+... ..+.++|... ..+|+|+|+|+|.
T Consensus 254 -------------------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~ 290 (383)
T 2ewy_A 254 -------------------------------------------EFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENS 290 (383)
T ss_dssp -------------------------------------------CCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSST
T ss_pred -------------------------------------------cCccccccccccccccCCcccHhhCCcEEEEECCCCC
Confidence 000000 1135677654 2589999999763
Q ss_pred ----EEEeCcccceeeecc-CcccceeE-eeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 324 ----IFNLSPEQYILKTGE-GIAEVCIS-GFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 324 ----~~~l~p~~yi~~~~~-~~~~~C~~-~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
+++|+|++|+.+..+ .....|+. .+... .+.||||++|||++|+|||++++|||||+++
T Consensus 291 ~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~------~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 355 (383)
T 2ewy_A 291 SRSFRITILPQLYIQPMMGAGLNYECYRFGISPS------TNALVIGATVMEGFYVIFDRAQKRVGFAASP 355 (383)
T ss_dssp TEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE------SSCEEECHHHHTTEEEEEETTTTEEEEEECT
T ss_pred CceEEEEEChHHheeecccCCCCceeEEEEecCC------CCcEEEChHHhCCeeEEEECCCCeEEEEecc
Confidence 799999999987642 22457985 45432 2579999999999999999999999999974
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.3e-37 Score=312.48 Aligned_cols=262 Identities=23% Similarity=0.325 Sum_probs=202.5
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCc-EEEEEEeeCCccccccCccEEEeeccCccccCC--CCchhhhhhhcCC
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQ-VFIEATREGSLTFLLARFDGIIGLGFREIAVGD--AVPVWDNMVEQGL 99 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~-~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~--~~~~~~~L~~qg~ 99 (388)
.|.|+.+.+.|.++.|+|+++. +..+..+ .|++++...+..+....+|||||||++.++... .++++++|++|+.
T Consensus 84 ~i~Yg~Gs~~G~~~~D~v~ig~--~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~ 161 (402)
T 3vf3_A 84 YVPYTQGKWEGELGTDLVSIPH--GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTH 161 (402)
T ss_dssp EEECSSCEEEEEEEEEEEECTT--SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSC
T ss_pred EEEECcEEEEEEEEEEEEEECC--ccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccC
Confidence 6888888899999999999983 2344433 467666554432234578999999999988643 7899999999999
Q ss_pred CCcceEEEEecCCC-----C---CCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceec---CCce
Q 016523 100 VSEEVFSFWLNRDP-----D---AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCE---GGCA 168 (388)
Q Consensus 100 i~~~~FSl~L~~~~-----~---~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~---~~~~ 168 (388)
|+ ++||+||.+.. . ....|.|+|||+|++++.|++.|+|+.+..||.|.+++|+++++.+.+.. ....
T Consensus 162 i~-~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~ 240 (402)
T 3vf3_A 162 VP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK 240 (402)
T ss_dssp CC-SCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSC
T ss_pred Cc-cceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCe
Confidence 97 99999997531 0 23589999999999999999999999999999999999999999876422 2567
Q ss_pred EEEcCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceee
Q 016523 169 AIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTV 248 (388)
Q Consensus 169 aivDSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~ 248 (388)
++|||||+++++|++++++|.+++++.. . .
T Consensus 241 aiiDSGTt~~~lP~~~~~~i~~~i~~~~-------------~----------~--------------------------- 270 (402)
T 3vf3_A 241 SIVDSGTTNLRLPKKVFEAAVKSIKAAS-------------S----------T--------------------------- 270 (402)
T ss_dssp EEECTTCCSEEEEHHHHHHHHHHHHHHT-------------T----------T---------------------------
T ss_pred EEEECCCCcccCCHHHHHHHHHHHhhhc-------------c----------c---------------------------
Confidence 9999999999999999999999996531 0 0
Q ss_pred eecccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCC-CCCceeecCCCCC-----CCCcEEEEECC
Q 016523 249 VEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN-PMGESIIDCDRIP-----TMPNVSFTIGD 322 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~-~~~~~~v~C~~~~-----~lP~i~f~~gg 322 (388)
...+. ....+.++|.... .+|+|+|+|++
T Consensus 271 ---------------------------------------------~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g 305 (402)
T 3vf3_A 271 ---------------------------------------------EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMG 305 (402)
T ss_dssp ---------------------------------------------SCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEEC
T ss_pred ---------------------------------------------cccCccccccccccccccccchHhhCCceEEEEec
Confidence 00000 0112357887654 58999999986
Q ss_pred E------EEEeCcccceeeeccCc--ccceeE-eeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 323 K------IFNLSPEQYILKTGEGI--AEVCIS-GFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 323 ~------~~~l~p~~yi~~~~~~~--~~~C~~-~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
. +++|+|++|+.+..+.. ...|+. .+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 306 ~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 306 EVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp SSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE------ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred CCCCceEEEEECHHHheehhccCCCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 4 59999999999865432 247996 3332 23579999999999999999999999999974
No 30
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.2e-37 Score=313.78 Aligned_cols=257 Identities=17% Similarity=0.219 Sum_probs=198.4
Q ss_pred eEEee--eeEEEEEEEeeeEEeecccc--------eEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhh
Q 016523 23 RIRCV--LVLIVHFLNWCPFTWQCACL--------QIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 92 (388)
Q Consensus 23 ~~~~~--~~~~~g~~~~d~~~~~~~~~--------~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~ 92 (388)
+++|. .+.+.|.++.|+|+++...| +++++|.||+++.+.+..+.....|||||||++.++ +..
T Consensus 97 ~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s------~~~ 170 (403)
T 3aup_A 97 MSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPIS------LPN 170 (403)
T ss_dssp EEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTTS------HHH
T ss_pred EeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCcC------HHH
Confidence 57775 67889999999999983211 899999999998764332445678999999998765 445
Q ss_pred hhhhcCCCCcceEEEEecCCCCCCCCcEEEECCCCCCce--e-c-----ceeEeeeccc--ceeEEEEccEEEcCeee-c
Q 016523 93 NMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHF--K-G-----KHTYVPVTKK--GYWQFELGDILIGNQST-G 161 (388)
Q Consensus 93 ~L~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~~--~-g-----~l~~~pv~~~--~~w~v~l~~i~vgg~~~-~ 161 (388)
+| +++.+.+++||+||.+.+ ...|.|+||| |++++ + | ++.|+|+... +||.|.+++|+|+++.+ .
T Consensus 171 ql-~~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~ 246 (403)
T 3aup_A 171 QL-ASHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFP 246 (403)
T ss_dssp HH-HHHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEETTEEEEC
T ss_pred HH-HhhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEEEEECCEEccc
Confidence 55 456677899999998853 2489999999 98888 5 5 9999999766 89999999999999887 4
Q ss_pred eecC--------CceEEEcCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhcccc
Q 016523 162 VCEG--------GCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLC 233 (388)
Q Consensus 162 ~~~~--------~~~aivDSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c 233 (388)
+... ...+||||||+++++|++++++|.+++.+.- ..+.
T Consensus 247 ~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~----------~~~~----------------------- 293 (403)
T 3aup_A 247 LNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL----------PKQA----------------------- 293 (403)
T ss_dssp C------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS----------CGGG-----------------------
T ss_pred CChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh----------cccc-----------------------
Confidence 3221 2349999999999999999999999994320 0000
Q ss_pred ccCCcccccccceeeeecccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCCC
Q 016523 234 AFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTM 313 (388)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~l 313 (388)
. + .+.....+.++|+.+..+
T Consensus 294 -------------~-~----------------------------------------------~~~~~~~~c~~c~~~~~~ 313 (403)
T 3aup_A 294 -------------Q-V----------------------------------------------KSVAPFGLCFNSNKINAY 313 (403)
T ss_dssp -------------E-E----------------------------------------------CCCTTCSCEECGGGCCCC
T ss_pred -------------c-c----------------------------------------------CCCCCCCceEECCCcCcC
Confidence 0 0 001123478899887789
Q ss_pred CcEEEEECCE---EEEeCcccceeeeccCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEE-Eec
Q 016523 314 PNVSFTIGDK---IFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGF-AEA 387 (388)
Q Consensus 314 P~i~f~~gg~---~~~l~p~~yi~~~~~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGf-A~~ 387 (388)
|+|+|+|+|. .++|+|++|+++.. ....|+ +|+..+. +.++.||||++|||++|+|||++++|||| |++
T Consensus 314 P~i~f~f~g~~~~~~~l~~~~y~~~~~--~~~~C~-~~~~~~~--~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~ 386 (403)
T 3aup_A 314 PSVDLVMDKPNGPVWRISGEDLMVQAQ--PGVTCL-GVMNGGM--QPRAEITLGARQLEENLVVFDLARSRVGFSTSS 386 (403)
T ss_dssp CCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCS--CCSSSEEECHHHHTTSCEEEETTTTEEEEESSC
T ss_pred CcEEEEEcCCCceEEEEcccceEEEcC--CCeEEE-EEEcCCC--CCCCcEEEChHHhcCeEEEEECCCCEEEEeccc
Confidence 9999999874 99999999999764 246899 8886542 12468999999999999999999999999 775
No 31
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.8e-37 Score=317.28 Aligned_cols=264 Identities=23% Similarity=0.304 Sum_probs=206.1
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccC--CCCchhhhhhhcCCC
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLV 100 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i 100 (388)
.|.|+.+.+.|.++.|+|+++......+. +.|++++...+..+....+|||||||++.++.. ..++++++|++|+.|
T Consensus 130 ~i~Yg~Gs~~G~~~~Dtv~ig~~~~~~~~-~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i 208 (455)
T 3lpj_A 130 YVPYTQGKWEGELGTDLVSIPHGPNVTVR-ANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHV 208 (455)
T ss_dssp EEECSSCEEEEEEEEEEEECTTSCSCEEE-EEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCC
T ss_pred EEEeCCeEEEEEEEEEEEEECCCcceeeE-EEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCC
Confidence 68899998999999999999832223333 568887765543223457899999999998864 378999999999999
Q ss_pred CcceEEEEecCCCC--------CCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceec---CCceE
Q 016523 101 SEEVFSFWLNRDPD--------AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCE---GGCAA 169 (388)
Q Consensus 101 ~~~~FSl~L~~~~~--------~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~---~~~~a 169 (388)
+ ++||+||.+... ....|.|+|||+|++++.|++.|+|+.+..||.|.+++|+++++.+.+.. ....+
T Consensus 209 ~-~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~a 287 (455)
T 3lpj_A 209 P-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKS 287 (455)
T ss_dssp C-SCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCE
T ss_pred C-ceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeE
Confidence 7 999999986410 23589999999999999999999999999999999999999999876422 25679
Q ss_pred EEcCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeee
Q 016523 170 IVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVV 249 (388)
Q Consensus 170 ivDSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~ 249 (388)
+|||||+++++|++++++|.+++++... ...+.+
T Consensus 288 iiDSGTt~~~lP~~~~~~i~~~i~~~~~--------~~~~~~-------------------------------------- 321 (455)
T 3lpj_A 288 IVDSGTTNLRLPKKVFEAAVKSIKAASS--------TEKFPD-------------------------------------- 321 (455)
T ss_dssp EECTTSSSEEEEHHHHHHHHHHHHHHTT--------TSCCCH--------------------------------------
T ss_pred EEECCCcceeCCHHHHHHHHHHhhhhcc--------ccccCc--------------------------------------
Confidence 9999999999999999999999965310 000000
Q ss_pred ecccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCCCC-----CCcEEEEECCE-
Q 016523 250 EKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPT-----MPNVSFTIGDK- 323 (388)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~~~-----lP~i~f~~gg~- 323 (388)
.....+.++|..... +|+|+|+|+|.
T Consensus 322 ------------------------------------------------~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~ 353 (455)
T 3lpj_A 322 ------------------------------------------------GFWLGEQLVCWQAGTTPWNIFPVISLYLMGEV 353 (455)
T ss_dssp ------------------------------------------------HHHTTCSCEEESTTCCCGGGSCCEEEEEECSS
T ss_pred ------------------------------------------------ccccCcceecccccCCchhcCCcEEEEEcCCC
Confidence 000123578876554 89999999875
Q ss_pred -----EEEeCcccceeeeccCc--ccceeE-eeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 324 -----IFNLSPEQYILKTGEGI--AEVCIS-GFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 324 -----~~~l~p~~yi~~~~~~~--~~~C~~-~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
+++|+|++|+.+..+.. ...|+. .+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 354 ~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 354 TNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp TTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred cCceEEEEECHHHheEeccCCCCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 59999999999865432 257996 3321 23679999999999999999999999999974
No 32
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=5.6e-37 Score=307.57 Aligned_cols=261 Identities=23% Similarity=0.320 Sum_probs=201.4
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEee-CcEEEEEEeeCCcccc-ccCccEEEeeccCccccC--CCCchhhhhhhcC
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFL-LQVFIEATREGSLTFL-LARFDGIIGLGFREIAVG--DAVPVWDNMVEQG 98 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~-~~~Fg~~~~~~~~~f~-~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg 98 (388)
.|+|+.+...|.++.|+|+++. +..++ .+.|+++....+ .|. ...+|||||||++.++.. ..++++++|++|+
T Consensus 77 ~i~Yg~Gs~~G~~~~Dtv~ig~--g~~~~~~~~~~~~~~~~~-~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~ 153 (395)
T 2qp8_A 77 YVPYTQGKWEGELGTDLVSIPH--GPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT 153 (395)
T ss_dssp EEECSSCEEEEEEEEEEEECTT--SCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHS
T ss_pred EEEECCcEEEEEEEeEEEEECC--CCCceEEEEEEEEEccCc-ccccccCccceEEcCchhhccCCCCCCCHHHHHHHcc
Confidence 6888888889999999999973 23333 256777665433 243 356799999999988753 5788999999999
Q ss_pred CCCcceEEEEecCCCC--------CCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceec---CCc
Q 016523 99 LVSEEVFSFWLNRDPD--------AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCE---GGC 167 (388)
Q Consensus 99 ~i~~~~FSl~L~~~~~--------~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~---~~~ 167 (388)
.++ ++||+||++..- ....|+|+|||+|++++.|++.|+|+.+..||.|.+++|+|+++.+.+.. ...
T Consensus 154 ~i~-~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~ 232 (395)
T 2qp8_A 154 HVP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYD 232 (395)
T ss_dssp CCC-SCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSS
T ss_pred CCc-ceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCc
Confidence 996 899999986410 12589999999999999999999999989999999999999999875422 246
Q ss_pred eEEEcCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCccccccccee
Q 016523 168 AAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKT 247 (388)
Q Consensus 168 ~aivDSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~ 247 (388)
.+++||||+++++|++++++|.+++++... ..++
T Consensus 233 ~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~--------~~~~-------------------------------------- 266 (395)
T 2qp8_A 233 KSIVDSGTTNLRLPKKVFEAAVKSIKAASS--------TEKF-------------------------------------- 266 (395)
T ss_dssp CEEECTTCCSEEEEHHHHHHHHHHHHHHTT--------TSCC--------------------------------------
T ss_pred eEEEEcCCCcEecCHHHHHHHHHHHhhhcc--------cccC--------------------------------------
Confidence 799999999999999999999999954310 0000
Q ss_pred eeecccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCC-CCceeecCCCCC-----CCCcEEEEEC
Q 016523 248 VVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP-MGESIIDCDRIP-----TMPNVSFTIG 321 (388)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~-~~~~~v~C~~~~-----~lP~i~f~~g 321 (388)
+.. ...+.++|.... .+|+|+|+|+
T Consensus 267 -------------------------------------------------~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~ 297 (395)
T 2qp8_A 267 -------------------------------------------------PDGFWLGEQLVCWQAGTTPWNIFPVISLYLM 297 (395)
T ss_dssp -------------------------------------------------CHHHHTTCSCEEESTTCCCGGGSCCEEEEEE
T ss_pred -------------------------------------------------CccccccccccccccccchHhhCCcEEEEEc
Confidence 000 011246776543 4899999997
Q ss_pred CE------EEEeCcccceeeecc--Cccccee-EeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 322 DK------IFNLSPEQYILKTGE--GIAEVCI-SGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 322 g~------~~~l~p~~yi~~~~~--~~~~~C~-~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
|. +++|+|++|+.+..+ .....|+ ..+... .+.||||++|||++|+|||++++|||||+++
T Consensus 298 g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~------~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 367 (395)
T 2qp8_A 298 GEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS------STGTVMGAVIMEGFYVVFDRARKRIGFAVSA 367 (395)
T ss_dssp CSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE------SSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred cCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC------CCcEEEChHHhCCeeEEEECCCCEEEEEecc
Confidence 64 799999999998653 2235797 466532 2579999999999999999999999999874
No 33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=6.2e-37 Score=310.75 Aligned_cols=256 Identities=14% Similarity=0.154 Sum_probs=197.2
Q ss_pred eEEee--eeEEEEEEEeeeEEeeccc------ceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhh
Q 016523 23 RIRCV--LVLIVHFLNWCPFTWQCAC------LQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNM 94 (388)
Q Consensus 23 ~~~~~--~~~~~g~~~~d~~~~~~~~------~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L 94 (388)
.|+|. .+...|+++.|+|+++... +++++++.|||++.+... ....++|||||||++.++ +..+|
T Consensus 96 ~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~-g~~~~~dGIlGLg~~~lS------l~sql 168 (413)
T 3vla_A 96 FPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQ-NLASGVVGMAGLGRTRIA------LPSQF 168 (413)
T ss_dssp CCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGT-TSCTTCCEEEECSSSSSS------HHHHH
T ss_pred eeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccccccc-CcccccccccccCCCCcc------hHHHH
Confidence 45664 4678999999999997322 378999999999876322 123568999999999876 67789
Q ss_pred hhcCCCCcceEEEEecCCCCCCCCcEEEECCCCCCc-----eecc-eeEeeeccc--------------ceeEEEEccEE
Q 016523 95 VEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKH-----FKGK-HTYVPVTKK--------------GYWQFELGDIL 154 (388)
Q Consensus 95 ~~qg~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~~-----~~g~-l~~~pv~~~--------------~~w~v~l~~i~ 154 (388)
.+|+.+ +++||+||.+.. ...|+|+|||+|..+ +.|+ +.|+|+..+ .||.|++++|+
T Consensus 169 ~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~Is 245 (413)
T 3vla_A 169 ASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIK 245 (413)
T ss_dssp HHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEE
T ss_pred hhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEEEEEEE
Confidence 999988 899999999853 258999999998753 6788 999999764 79999999999
Q ss_pred EcCeeeceec--------CCceEEEcCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhh
Q 016523 155 IGNQSTGVCE--------GGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKV 226 (388)
Q Consensus 155 vgg~~~~~~~--------~~~~aivDSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~ 226 (388)
||++.+.+.. ++..+||||||+++++|++++++|.+++.+.- . ...+...
T Consensus 246 Vgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~----------~----------~~~~~~~-- 303 (413)
T 3vla_A 246 INSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKES----------A----------ARNITRV-- 303 (413)
T ss_dssp ETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHH----------H----------HTTCCEE--
T ss_pred ECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHh----------c----------ccCCCcC--
Confidence 9999876432 34689999999999999999999999995320 0 0000000
Q ss_pred hhhccccccCCcccccccceeeeecccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeec
Q 016523 227 CQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIID 306 (388)
Q Consensus 227 c~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~ 306 (388)
+. ..+..+
T Consensus 304 ----------------------------------------------------------------------~~--~~~~~~ 311 (413)
T 3vla_A 304 ----------------------------------------------------------------------AS--VAPFGA 311 (413)
T ss_dssp ----------------------------------------------------------------------CC--CTTCSC
T ss_pred ----------------------------------------------------------------------CC--CCCCcc
Confidence 00 001123
Q ss_pred CCCC---------CCCCcEEEEECC--EEEEeCcccceeeeccCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEE
Q 016523 307 CDRI---------PTMPNVSFTIGD--KIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVF 375 (388)
Q Consensus 307 C~~~---------~~lP~i~f~~gg--~~~~l~p~~yi~~~~~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~Vf 375 (388)
|... ..+|+|+|+|+| +.|+|+|++|+++..+ ...|+ +|...+. +.++.||||+.|||++|+||
T Consensus 312 C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~--~~~~~~IlGd~fl~~~~vvf 386 (413)
T 3vla_A 312 CFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCL-GVVDGGS--NLRTSIVIGGHQLEDNLVQF 386 (413)
T ss_dssp EEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEE-CEEEEES--SCSSSEEECHHHHTTEEEEE
T ss_pred eeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEE-EEEecCC--CcccceeEehhhhcCeEEEE
Confidence 3322 268999999987 8999999999998653 35798 6665542 13468999999999999999
Q ss_pred eCCCCeEEEEec
Q 016523 376 DSGKLRIGFAEA 387 (388)
Q Consensus 376 D~~~~rIGfA~~ 387 (388)
|++++|||||++
T Consensus 387 D~~~~riGfa~~ 398 (413)
T 3vla_A 387 DLATSRVGFSGT 398 (413)
T ss_dssp ETTTTEEEEEEE
T ss_pred ECCCCEEEEEEe
Confidence 999999999986
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.5e-36 Score=300.99 Aligned_cols=263 Identities=17% Similarity=0.190 Sum_probs=190.9
Q ss_pred eEEeeeeE-EEEEEEeeeEEeeccc-ceEeeCc----EEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhh
Q 016523 23 RIRCVLVL-IVHFLNWCPFTWQCAC-LQIFLLQ----VFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVE 96 (388)
Q Consensus 23 ~~~~~~~~-~~g~~~~d~~~~~~~~-~~~v~~~----~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~ 96 (388)
.|+|+.+. ++|+++.|+|+++... ++.+++| .||+++.+.+..+ ...+|||||||+++++ +..+|.+
T Consensus 84 ~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~~~ql~~ 156 (381)
T 1t6e_X 84 PYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------LPAQVAS 156 (381)
T ss_dssp CBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------HHHHHHH
T ss_pred cccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------hHHHHhh
Confidence 46777665 4899999999998422 3677776 4599987532223 3578999999998776 5678988
Q ss_pred cCCCCcceEEEEecCCCCCCCCcEEEECCCCCC--ceecceeEeeeccc---ceeEEEEccEEEcCeeeceecC---Cce
Q 016523 97 QGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPK--HFKGKHTYVPVTKK---GYWQFELGDILIGNQSTGVCEG---GCA 168 (388)
Q Consensus 97 qg~i~~~~FSl~L~~~~~~~~~G~L~fGgid~~--~~~g~l~~~pv~~~---~~w~v~l~~i~vgg~~~~~~~~---~~~ 168 (388)
|++ .+++||+||.+. ..|+|+|||+|.. ++.|++.|+|+..+ .+|.|.+++|+||++.+.++.. +..
T Consensus 157 ~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~ 231 (381)
T 1t6e_X 157 AQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGG 231 (381)
T ss_dssp HHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTC
T ss_pred hcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHccCCC
Confidence 885 489999999875 3899999998764 47899999999753 4666999999999998765433 356
Q ss_pred EEEcCCCcCcccCHHHHHHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceee
Q 016523 169 AIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTV 248 (388)
Q Consensus 169 aivDSGTs~i~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~ 248 (388)
+|+||||+++++|++++++|.+++.+.- ..++.. -+.+.+
T Consensus 232 ~iiDTGTtl~~lp~~~~~~l~~~~~~~~---------~~~~~~------g~~~~~------------------------- 271 (381)
T 1t6e_X 232 VMLSTRLPYVLLRPDVYRPLMDAFTKAL---------AAQHAN------GAPVAR------------------------- 271 (381)
T ss_dssp EEECSSCSSEEECHHHHHHHHHHHHHHH---------HHC-------------CC-------------------------
T ss_pred EEEECCCccEEeCHHHHHHHHHHHHHhh---------cccccc------cccccc-------------------------
Confidence 9999999999999999999999884320 000000 000000
Q ss_pred eecccccCCCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCC---------CCCCcEEEE
Q 016523 249 VEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRI---------PTMPNVSFT 319 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~---------~~lP~i~f~ 319 (388)
.+. .....++|... ..+|+|+|+
T Consensus 272 -----------------------------------------------~~~-~~~~~~~C~~~~~~~~~~~~~~~P~i~f~ 303 (381)
T 1t6e_X 272 -----------------------------------------------AVE-AVAPFGVCYDTKTLGNNLGGYAVPNVQLG 303 (381)
T ss_dssp -----------------------------------------------EEC-CCTTCSCEEEGGGCCEETTEECCCCEEEE
T ss_pred -----------------------------------------------cCC-CCCCCCccCCCCCCcccccCCcCCeEEEE
Confidence 000 00111344322 268999999
Q ss_pred EC-CEEEEeCcccceeeeccCcccceeEeeEeccCC---CCCCCceEEcHhhhcceEEEEeCCCCeEEEEecC
Q 016523 320 IG-DKIFNLSPEQYILKTGEGIAEVCISGFMAFDLP---PPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 388 (388)
Q Consensus 320 ~g-g~~~~l~p~~yi~~~~~~~~~~C~~~i~~~d~~---~~~~~~~ILG~~Flr~~y~VfD~~~~rIGfA~~~ 388 (388)
|+ |+.++|+|++|+++..+ ...|+ +|...+.+ .+.++.||||+.|||++|+|||++++|||||+++
T Consensus 304 f~gg~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 304 LDGGSDWTMTGKNSMVDVKQ--GTACV-AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp ETTSCEEEECHHHHEEEEET--TEEEE-SEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred ECCCcEEEeCCCeEEEEcCC--CeEEE-EEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 97 59999999999997642 35798 57765421 1123689999999999999999999999999974
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.96 E-value=2.6e-28 Score=229.71 Aligned_cols=165 Identities=58% Similarity=0.965 Sum_probs=149.9
Q ss_pred eEEeeeeEEEEEEEeeeEEeecccceEeeCcEEEEEEeeCCccccccCccEEEeeccCccccCCCCchhhhhhhcCCCCc
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSE 102 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~~~~~~~v~~~~Fg~~~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~ 102 (388)
.|+|+.+.+.|.++.|+|+++ ++++++|.||+++.+.+..|....+|||||||++.++ .|++++|++||+|++
T Consensus 74 ~i~Yg~Gs~~G~~~~D~v~~g---~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~ 146 (239)
T 1b5f_A 74 AIIYGTGSITGFFSQDSVTIG---DLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKE 146 (239)
T ss_dssp EEECSSCEEEEEEEEEEEEET---TEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSS
T ss_pred EEEECCCcEEEEEEEEEEEEC---CcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCC
Confidence 578888888999999999999 8999999999999887656777788999999999876 578899999999999
Q ss_pred ceEEEEecCCCCCCCCcEEEECCCCCCceecceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 103 EVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 103 ~~FSl~L~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
++||+||.+.++....|+|+|||+|++++.|++.|+|+.+.+||.|.+++|+|+++.+.++..+..+++||||+++++|+
T Consensus 147 ~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 147 RRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp SEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred CEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 99999999864444689999999999999999999999989999999999999999877666778999999999999999
Q ss_pred HHHHHHHHHhCC
Q 016523 183 PVVTEINHAIGG 194 (388)
Q Consensus 183 ~~~~~i~~~i~~ 194 (388)
+++++|.+++++
T Consensus 227 ~~~~~i~~~iga 238 (239)
T 1b5f_A 227 AIVTQINHAIGA 238 (239)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhCC
Confidence 999999999975
No 36
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.84 E-value=5.5e-21 Score=153.35 Aligned_cols=87 Identities=66% Similarity=1.107 Sum_probs=77.0
Q ss_pred CceeecCCCCCCCCcEEEEECCEEEEeCcccceeeeccCcccceeEeeEeccCCCCCCCceEEcHhhhcceEEEEeCCCC
Q 016523 301 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKL 380 (388)
Q Consensus 301 ~~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~i~~~d~~~~~~~~~ILG~~Flr~~y~VfD~~~~ 380 (388)
|.|.+||+.+.++|+|+|+|+|+.++|+|++|+.+........|+++|++.+.+ +.++.||||++|||++|+|||++++
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechHHhccEEEEEECCCC
Confidence 568999998888999999999999999999999987554456899999987654 4557899999999999999999999
Q ss_pred eEEEEecC
Q 016523 381 RIGFAEAA 388 (388)
Q Consensus 381 rIGfA~~~ 388 (388)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999975
No 37
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.79 E-value=2.8e-20 Score=156.13 Aligned_cols=105 Identities=61% Similarity=1.111 Sum_probs=78.2
Q ss_pred CCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccCCcccccccceeeeeccc--ccCCCCcccchhhhhHH
Q 016523 193 GGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKEN--VSAGDSAVCSACEMAVV 270 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 270 (388)
+++|+++.+|+.+|++|++.|+++|.++++|+.+|+++++|..++.+.++.+++.++++.+ .+.++...|++|+++|+
T Consensus 2 ~a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~~~~~~~C~~Ce~~V~ 81 (108)
T 3rfi_A 2 SAMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSSVGEAPLCTACEMAVV 81 (108)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC------------------------CCHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCcccccccccccccccccccccCCCCCcChhHHHHHH
Confidence 3557889999999999999999999999999999999999999888777766677666542 12258899999999999
Q ss_pred HHHHHhhhchhHHHHHHHhhhhccCCC
Q 016523 271 WVQNQLKQKQTKEKVLSYINELCDSLP 297 (388)
Q Consensus 271 ~~~~~~~~~~t~~~i~~~~~~~c~~~p 297 (388)
|+++.|++|+|+++|+.+++++|+++|
T Consensus 82 ~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 82 WMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 999999999999999999999999987
No 38
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.56 E-value=3.9e-05 Score=61.34 Aligned_cols=39 Identities=38% Similarity=0.734 Sum_probs=35.2
Q ss_pred eecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccccC
Q 016523 198 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFN 236 (388)
Q Consensus 198 ~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~~ 236 (388)
++.+|+.+|++|++.|+++|.++.+|+.+|+.+++|..+
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~ 84 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGT 84 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC---
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCc
Confidence 689999999999999999999999999999999999764
No 39
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.40 E-value=4.5e-05 Score=58.94 Aligned_cols=37 Identities=30% Similarity=0.679 Sum_probs=35.7
Q ss_pred eecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccc
Q 016523 198 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 234 (388)
Q Consensus 198 ~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~ 234 (388)
++.+|+.+|++|++.|+++|.++++|+.+|+.+++|+
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 6899999999999999999999999999999999996
No 40
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=97.35 E-value=5.6e-05 Score=59.16 Aligned_cols=38 Identities=39% Similarity=0.749 Sum_probs=35.7
Q ss_pred eecchhhhhhhhhhhHHHHHhhCCCchhhhhhcccccc
Q 016523 198 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAF 235 (388)
Q Consensus 198 ~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~~ 235 (388)
++.+|+.+|++|++.|+++|.++++|+.+|+.+++|+.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~ 82 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSG 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC-
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCCC
Confidence 68899999999999999999999999999999999964
No 41
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.29 E-value=9.2e-05 Score=59.14 Aligned_cols=50 Identities=22% Similarity=0.585 Sum_probs=42.9
Q ss_pred CCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCC
Q 016523 257 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDR 309 (388)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~ 309 (388)
++...|.+|+++|.+++..|+++.|+++|..+++++|..+|... ...|..
T Consensus 3 ~~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~~---~~~C~~ 52 (91)
T 2qyp_A 3 VSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSL---SEECQE 52 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSST---TTTHHH
T ss_pred CCCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCCc---ccchHH
Confidence 35678999999999999999999999999999999999998642 345653
No 42
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=97.27 E-value=0.00014 Score=56.87 Aligned_cols=41 Identities=37% Similarity=0.715 Sum_probs=38.6
Q ss_pred CcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCC
Q 016523 259 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP 299 (388)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~ 299 (388)
...|.+|+++|.++++.++++.|+++|..+++++|.++|..
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 46799999999999999999999999999999999999864
No 43
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=97.23 E-value=8.9e-05 Score=60.85 Aligned_cols=37 Identities=30% Similarity=0.505 Sum_probs=35.7
Q ss_pred eecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccc
Q 016523 198 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 234 (388)
Q Consensus 198 ~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~ 234 (388)
+..+|+.+|++|.+.|+++|.++.+|+.+|+.+++|+
T Consensus 63 ~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 63 GTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp HHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 6899999999999999999999999999999999995
No 44
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=97.22 E-value=0.00021 Score=55.71 Aligned_cols=46 Identities=17% Similarity=0.408 Sum_probs=39.6
Q ss_pred HHHHHHhCCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccc
Q 016523 186 TEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 234 (388)
Q Consensus 186 ~~i~~~i~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~ 234 (388)
+.+=+.++. +..+|+.+|++|.+.|+++|.++.+|+.+|..+++|.
T Consensus 32 ~~~C~~lp~---~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 32 SQVCDKLKI---LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp HHHHHHSCS---THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred HHHHhhCch---hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 334444543 6899999999999999999999999999999999995
No 45
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.21 E-value=0.00016 Score=55.75 Aligned_cols=46 Identities=28% Similarity=0.689 Sum_probs=40.9
Q ss_pred cccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCC
Q 016523 260 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCD 308 (388)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~ 308 (388)
..|.+|+++|.+++..++++.|+++|...++++|.++|.. +...|.
T Consensus 3 ~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~ 48 (80)
T 3bqp_A 3 GFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCD 48 (80)
T ss_dssp TTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHH
T ss_pred CcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhH
Confidence 5799999999999999999999999999999999999863 344565
No 46
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=97.15 E-value=0.00021 Score=55.67 Aligned_cols=41 Identities=27% Similarity=0.507 Sum_probs=38.1
Q ss_pred CCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCC
Q 016523 258 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP 299 (388)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~ 299 (388)
|...|.+|+++|+.++..+.++ |++.|+..++++|+++|..
T Consensus 1 ~~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~ 41 (77)
T 1of9_A 1 GEILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGF 41 (77)
T ss_dssp CCSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSST
T ss_pred CCCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChH
Confidence 4678999999999999999999 9999999999999999754
No 47
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=97.10 E-value=0.00027 Score=55.22 Aligned_cols=42 Identities=24% Similarity=0.611 Sum_probs=38.4
Q ss_pred CCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCC
Q 016523 257 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 298 (388)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~ 298 (388)
++...|.+|+++|.+++..++++.|++.|...++++|..+|.
T Consensus 2 ~~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 2 DSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 367889999999999999999999999999999999999985
No 48
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=97.10 E-value=0.00021 Score=55.47 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=36.1
Q ss_pred cccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCC
Q 016523 260 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 298 (388)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~ 298 (388)
..|.+|+++|+.+++.+ ++.|++.|+..++++|.++|.
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~ 39 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh
Confidence 36999999999999999 999999999999999999985
No 49
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=97.06 E-value=0.00015 Score=56.42 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=35.4
Q ss_pred eeecchhhhhhhhhhhHHHHHhhCCCchhhhhhcccc
Q 016523 197 VVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLC 233 (388)
Q Consensus 197 ~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c 233 (388)
.+..+|+.+|++|.+.|+++|.++.+|+.+|+.+++|
T Consensus 41 ~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 41 FIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp TTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 3689999999999999999999999999999999998
No 50
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=96.98 E-value=0.00017 Score=56.45 Aligned_cols=37 Identities=35% Similarity=0.710 Sum_probs=34.7
Q ss_pred eecchhhhhhhhhhhHHHHHhhC-CCchhhhhhccccc
Q 016523 198 VSAECKLVVSQYGDLIWDLLVSG-LLPEKVCQQIGLCA 234 (388)
Q Consensus 198 ~~~~~~~~~~~y~~~i~~~l~~~-~~p~~~c~~~~~c~ 234 (388)
++.+|+.+|++|++.|+++|.++ .+|+.+|+.+++|.
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 57899999999999999999998 59999999999995
No 51
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=96.88 E-value=0.00029 Score=55.18 Aligned_cols=37 Identities=24% Similarity=0.718 Sum_probs=33.4
Q ss_pred eeecchhhhhhhhhhhHHHHHhhCCCchhhhhhccccc
Q 016523 197 VVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 234 (388)
Q Consensus 197 ~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c~ 234 (388)
.++.+|+.+|++|++.+.++|. ..+|+++|+++++|+
T Consensus 44 ~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 44 GMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 3789999999999998888776 699999999999995
No 52
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=96.81 E-value=0.00042 Score=54.01 Aligned_cols=39 Identities=15% Similarity=0.429 Sum_probs=37.2
Q ss_pred cccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCC
Q 016523 260 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 298 (388)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~ 298 (388)
..|.+|+++|+.++..++++.|+++|+..++++|+++|.
T Consensus 2 ~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred CcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 369999999999999999999999999999999999986
No 53
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=96.79 E-value=0.00064 Score=53.16 Aligned_cols=41 Identities=24% Similarity=0.444 Sum_probs=38.4
Q ss_pred CcccchhhhhHHHHHHHhhhchhH-HHHHHHhhhhccCCCCC
Q 016523 259 SAVCSACEMAVVWVQNQLKQKQTK-EKVLSYINELCDSLPNP 299 (388)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~t~-~~i~~~~~~~c~~~p~~ 299 (388)
...|..|+++|+.++..++++.|+ ++|...++++|+++|..
T Consensus 3 ~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~~ 44 (81)
T 1n69_A 3 GDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPG 44 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCTT
T ss_pred CCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCcH
Confidence 468999999999999999999999 99999999999999853
No 54
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=96.42 E-value=0.00099 Score=51.69 Aligned_cols=34 Identities=18% Similarity=0.448 Sum_probs=31.8
Q ss_pred eecchhhhhhhhhhhHHHHHhhCCCchhhhhhcc
Q 016523 198 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIG 231 (388)
Q Consensus 198 ~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~ 231 (388)
+..+|+.+|++|++.|+++|.++.+|..+|.+++
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~ik 74 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR 74 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcC
Confidence 6789999999999999999999999999998764
No 55
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=96.36 E-value=0.00049 Score=56.38 Aligned_cols=52 Identities=15% Similarity=0.334 Sum_probs=44.2
Q ss_pred CCCcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCCCCCceeecCCCC
Q 016523 257 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRI 310 (388)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~~~~~~~v~C~~~ 310 (388)
++...|.+|+++|..++..+ ++|+++|+..++++|+.+|.....+.-.|..+
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~~ 70 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDHY 70 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHTT
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 57889999999999999999 77899999999999999986534455678754
No 56
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=95.52 E-value=0.0042 Score=49.70 Aligned_cols=51 Identities=24% Similarity=0.334 Sum_probs=41.3
Q ss_pred HHHHHHHHHh-CCcceeecchhhhhhhhhhhHHHHHhhCCCchhhhhhcccc
Q 016523 183 PVVTEINHAI-GGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLC 233 (388)
Q Consensus 183 ~~~~~i~~~i-~~~~~~~~~~~~~~~~y~~~i~~~l~~~~~p~~~c~~~~~c 233 (388)
..+++.-+.+ ++.+..+++|+.++++|.+.|+..|.++.+|+.+|+.+..|
T Consensus 36 ~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 36 KEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 3444444444 44445689999999999999999999999999999998877
No 57
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=91.21 E-value=0.59 Score=39.55 Aligned_cols=26 Identities=12% Similarity=-0.004 Sum_probs=23.2
Q ss_pred ceEEcHhhhcceEEEEeCCCCeEEEE
Q 016523 360 LWILGDVFMGVYHTVFDSGKLRIGFA 385 (388)
Q Consensus 360 ~~ILG~~Flr~~y~VfD~~~~rIGfA 385 (388)
..|||..||+++-...|+.++++-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 35999999999999999999998763
No 58
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=66.98 E-value=3.7 Score=35.27 Aligned_cols=26 Identities=15% Similarity=0.029 Sum_probs=23.0
Q ss_pred ceEEcHhhhcceEEEEeCCCCeEEEE
Q 016523 360 LWILGDVFMGVYHTVFDSGKLRIGFA 385 (388)
Q Consensus 360 ~~ILG~~Flr~~y~VfD~~~~rIGfA 385 (388)
..|||..||+.+-.+.|+.++++-|.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 46999999999999999999988653
No 59
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=45.15 E-value=3.3 Score=32.84 Aligned_cols=38 Identities=21% Similarity=0.354 Sum_probs=32.0
Q ss_pred CcccchhhhhHHHHHHHhhhchhHHHHHHHhhhhccCCCC
Q 016523 259 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 298 (388)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~~~~c~~~p~ 298 (388)
...|..|+++|+.++..+.+..+ .++..++..|.++..
T Consensus 10 ~l~C~~C~~~Vk~~e~~i~~~~~--eie~~~d~~Ckk~~~ 47 (87)
T 3s64_A 10 VIVCEICKMAVKLIVPEADKDLD--QLEKEFIQGCMTLIG 47 (87)
T ss_dssp TTHHHHHHHHHHHHTTCSSCSST--THHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHhccCCHH--HHHHHHHHHHHHhcc
Confidence 46799999999999999886333 699999999998843
No 60
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=44.55 E-value=23 Score=33.30 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=30.7
Q ss_pred cceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCHH
Q 016523 133 GKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 183 (388)
Q Consensus 133 g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~~ 183 (388)
|.+...|+.....|.++ |.||.+++ .+++|||++.+.+|..
T Consensus 4 g~v~~~~~~~~~~Y~~~---i~iG~Q~~-------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 4 GVATNTPTANDEEYITP---VTIGGTTL-------NLNFDTGSADLWVFST 44 (323)
T ss_dssp EEEEEEECGGGSCEEEE---EEETTEEE-------EEEEETTCCCEEECBT
T ss_pred CceeeeecCCCCEEEEE---EEECCEEE-------EEEEeCCCcceEEecC
Confidence 55666777666677665 67885554 4899999999999864
No 61
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=42.04 E-value=24 Score=33.23 Aligned_cols=41 Identities=15% Similarity=0.170 Sum_probs=30.3
Q ss_pred cceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCHH
Q 016523 133 GKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 183 (388)
Q Consensus 133 g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~~ 183 (388)
|.+...|+.....|.++ |.||.+++ .+++|||++.+.+|..
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q~~-------~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKSTL-------HLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTEEE-------EEEEETTCCCEEEECT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCEEE-------EEEEeCCCccceEeeC
Confidence 45566677666677665 67885554 4899999999999864
No 62
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=41.63 E-value=28 Score=32.84 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=30.2
Q ss_pred cceeEeeecccceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCHH
Q 016523 133 GKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 183 (388)
Q Consensus 133 g~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~~ 183 (388)
|.+...|+.....|.++ |.||.+++ .+++|||++.+.+|..
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q~~-------~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDDTL-------GLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTEEE-------EEEEETTCCCEEECBT
T ss_pred CceeeeEcCCCCEEEEE---EEECCEEE-------EEEEcCCCcceEEecC
Confidence 55566676666667665 67885554 4899999999999864
No 63
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=28.51 E-value=55 Score=31.08 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=29.1
Q ss_pred cceeEeeecc--cceeEEEEccEEEc--CeeeceecCCceEEEcCCCcCcccCHH
Q 016523 133 GKHTYVPVTK--KGYWQFELGDILIG--NQSTGVCEGGCAAIVDSGTSLLAGPTP 183 (388)
Q Consensus 133 g~l~~~pv~~--~~~w~v~l~~i~vg--g~~~~~~~~~~~aivDSGTs~i~lP~~ 183 (388)
|.....|+.. ..+|.++ |.|| .+.+ .+++|||++.+.+|..
T Consensus 5 g~~~~~~l~~~~~~~Y~~~---i~iGtP~q~~-------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDFDLEEYAIP---VSIGTPGQDF-------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEETTTTEEEEE---EEETTTTEEE-------EEEEETTCCCCEEEBT
T ss_pred CccceEEeecCCCCEEEEE---EEECCCCcEE-------EEEEcCCCCCeEECCC
Confidence 5556677754 4566665 6787 4544 4899999999999854
No 64
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=28.25 E-value=56 Score=30.72 Aligned_cols=40 Identities=20% Similarity=0.077 Sum_probs=27.5
Q ss_pred ceeEe-eecccceeEEEEccEEEc--CeeeceecCCceEEEcCCCcCcccCHH
Q 016523 134 KHTYV-PVTKKGYWQFELGDILIG--NQSTGVCEGGCAAIVDSGTSLLAGPTP 183 (388)
Q Consensus 134 ~l~~~-pv~~~~~w~v~l~~i~vg--g~~~~~~~~~~~aivDSGTs~i~lP~~ 183 (388)
.+... |......|.++ |.|| .+.+ .+++|||++.+.+|..
T Consensus 4 ~v~~~~~~~~~~~Y~~~---i~iGTP~Q~~-------~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 4 SATTTPIDSLDDAYITP---VQIGTPAQTL-------NLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEESSTTCCCEEEE---EEETTTTEEE-------EEEEETTCCCEEECBT
T ss_pred eeEeeecCCCCCEEEEE---EEECCCCeEE-------EEEECCCCCCeEEecC
Confidence 34444 55555666655 6788 4544 4899999999999854
No 65
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=26.96 E-value=61 Score=30.46 Aligned_cols=41 Identities=20% Similarity=0.119 Sum_probs=27.7
Q ss_pred cceeEe-eecccceeEEEEccEEEc--CeeeceecCCceEEEcCCCcCcccCHH
Q 016523 133 GKHTYV-PVTKKGYWQFELGDILIG--NQSTGVCEGGCAAIVDSGTSLLAGPTP 183 (388)
Q Consensus 133 g~l~~~-pv~~~~~w~v~l~~i~vg--g~~~~~~~~~~~aivDSGTs~i~lP~~ 183 (388)
|.+... |......|.++ |.|| .+.+ .+++|||++.+.+|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~~---i~iGTP~Q~~-------~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYITS---VSIGTPAQVL-------PLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEEE---EEETTTTEEE-------EEEEETTCCCEEECBT
T ss_pred cceeeecCCCCCCEEEEE---EEECCCCeEE-------EEEEcCCCCCeEEecC
Confidence 344444 44455566654 6788 4544 4899999999999864
No 66
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=25.90 E-value=28 Score=28.09 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=25.6
Q ss_pred eEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCHHHHH
Q 016523 146 WQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVT 186 (388)
Q Consensus 146 w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~~~~~ 186 (388)
|+=++-.+.++|+... +++|||...+.+......
T Consensus 6 ~~RP~v~v~I~Gq~~e-------~LLDTGAD~TVl~~~~w~ 39 (104)
T 1fmb_A 6 EKRPTTIVLINDTPLN-------VLLDTGADTSVLTTAHYN 39 (104)
T ss_dssp SSCCEEEEEETTEEEE-------EEECTTCSSCEEEHHHHH
T ss_pred cCCCEEEEEECCEEEE-------EEeccCCCcEEEccccCc
Confidence 3334445788998764 999999999999976553
No 67
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=25.69 E-value=71 Score=29.92 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=26.8
Q ss_pred ceeEeeecccceeEEEEccEEEc--CeeeceecCCceEEEcCCCcCcccCHH
Q 016523 134 KHTYVPVTKKGYWQFELGDILIG--NQSTGVCEGGCAAIVDSGTSLLAGPTP 183 (388)
Q Consensus 134 ~l~~~pv~~~~~w~v~l~~i~vg--g~~~~~~~~~~~aivDSGTs~i~lP~~ 183 (388)
.+.-.+......|.++ |.|| .+.+ .+++|||++.+.+|..
T Consensus 5 ~v~~~~~~~~~~Y~~~---i~iGTP~q~~-------~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 5 TVPMTDYGNDIEYYGQ---VTIGTPGKKF-------NLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEEETTTTEEEEE---EEETTTTEEE-------EEEEETTCCCCEEEBT
T ss_pred ceeeeecCCCCEEEEE---EEECCCCeEE-------EEEEcCCCCCEEEccC
Confidence 3333444455566655 6787 5554 4899999999998854
No 68
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=23.13 E-value=57 Score=25.45 Aligned_cols=21 Identities=10% Similarity=-0.054 Sum_probs=19.3
Q ss_pred eEEeeeeEEEEEEEeeeEEee
Q 016523 23 RIRCVLVLIVHFLNWCPFTWQ 43 (388)
Q Consensus 23 ~~~~~~~~~~g~~~~d~~~~~ 43 (388)
+|+|+.+.+.|.++.|+|+++
T Consensus 75 ~i~Yg~Gs~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 75 DIHYGSGSLSGYLSQDTVSVP 95 (97)
T ss_dssp EEECSSCEEEEEEEEEEEEES
T ss_pred EEEECCcEEEEEEEEEEEEEC
Confidence 788998889999999999997
No 69
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=22.31 E-value=42 Score=27.71 Aligned_cols=30 Identities=13% Similarity=0.143 Sum_probs=24.8
Q ss_pred eeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 145 YWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 145 ~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
-|+=++- +.++|+.+. +++|||...+.+..
T Consensus 11 l~~rP~v-ikI~Gq~~e-------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK-------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE-------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE-------EEecCCCCcEEEcc
Confidence 4666666 899999875 89999999999885
No 70
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=21.58 E-value=38 Score=27.19 Aligned_cols=30 Identities=30% Similarity=0.392 Sum_probs=23.2
Q ss_pred eEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCH
Q 016523 146 WQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPT 182 (388)
Q Consensus 146 w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~ 182 (388)
|+=++-.+.++|+... +++|||...+.+..
T Consensus 6 ~~rP~vtvkI~Gq~~e-------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------EEeccCCCcEEEec
Confidence 3334455788999775 99999999999884
No 71
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=20.79 E-value=39 Score=27.18 Aligned_cols=29 Identities=17% Similarity=0.281 Sum_probs=23.1
Q ss_pred eEEEEccEEEcCeeeceecCCceEEEcCCCcCcccC
Q 016523 146 WQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGP 181 (388)
Q Consensus 146 w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP 181 (388)
|+=++-.+.++|+.+. +++|||...+.+.
T Consensus 6 ~~RP~vti~I~Gq~~e-------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 6 WKRPVVTAYIEGQPVE-------VLLDTGADDSIVA 34 (99)
T ss_dssp SSCCEEEEEETTEEEE-------EEECTTCSSCEES
T ss_pred ccCCeEEEEECCEEEE-------EEEecCCCceEEc
Confidence 4445556888999875 8999999999885
No 72
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=20.30 E-value=94 Score=28.97 Aligned_cols=40 Identities=23% Similarity=0.341 Sum_probs=25.2
Q ss_pred eEeeecc--cceeEEEEccEEEcCeeeceecCCceEEEcCCCcCcccCHH
Q 016523 136 TYVPVTK--KGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 183 (388)
Q Consensus 136 ~~~pv~~--~~~w~v~l~~i~vgg~~~~~~~~~~~aivDSGTs~i~lP~~ 183 (388)
.-.|+.. +..|.++ |.||.-+ ....+++|||++.+.+|..
T Consensus 4 ~~~~l~n~~~~~Y~~~---i~iGtP~-----q~~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 4 ASVPLTNYLDSQYFGK---IYLGTPP-----QEFTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEEEEEETTTEEEEE---EEETTTT-----EEEEEEEETTCCCEEEEBT
T ss_pred ceeeeEeccCCEEEEE---EEECCCC-----eEEEEEEeCCccceEEcCC
Confidence 3445543 3455554 6777421 2234899999999999854
Done!