RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 016527
(388 letters)
>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK
{Archaeon Methanothermobacter thermautotrophicus [TaxId:
145262]}
Length = 80
Score = 67.8 bits (166), Expect = 3e-15
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 106 FVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFA 165
+L+ + G + F +E +LY+ VT+ T+GYGD +P TP F
Sbjct: 6 LLLVLAVIIYGTAGFHF-------IEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFT 58
Query: 166 CLFVLVGFGFIDILLSGVVNYV 187
+++G G + + ++ ++
Sbjct: 59 VTLIVLGIGTFAVAVERLLEFL 80
Score = 63.6 bits (155), Expect = 1e-13
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 232 LGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFS 291
L +V+ I G F+E W S Y + +++ TVGYGD + T G +F ++
Sbjct: 6 LLLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLG 65
Query: 292 TLMVARAFLYLAEA 305
A A L E
Sbjct: 66 IGTFAVAVERLLEF 79
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces
coelicolor [TaxId: 1902]}
Length = 103
Score = 60.3 bits (146), Expect = 3e-12
Identities = 20/89 (22%), Positives = 40/89 (44%)
Query: 105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVF 164
A VLL I L G + G + AL++ + T T+GYGD+ P+T +
Sbjct: 11 ATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRCV 70
Query: 165 ACLFVLVGFGFIDILLSGVVNYVLDLQEN 193
A + ++ G ++ + + + + ++
Sbjct: 71 AVVVMVAGITSFGLVTAALATWFVGREQE 99
Score = 52.6 bits (126), Expect = 2e-09
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Query: 228 VGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPG 280
G A ++V+ + G+ + E + + + + SV + TTVGYGD TL G
Sbjct: 8 AGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWG 67
Query: 281 RFFAAIWLLFSTLMVARAFLYLAEARIDKRHRR 313
R A + ++ LA + + R
Sbjct: 68 RCVAVVVMVAGITSFGLVTAALATWFVGREQER 100
>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel
Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]}
Length = 116
Score = 53.1 bits (127), Expect = 2e-09
Identities = 19/85 (22%), Positives = 31/85 (36%)
Query: 101 IIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPA 160
L + + ++Y + V A +F + T+ T+GYGD+ P T
Sbjct: 28 FFASLAALFVVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDMHPQTVY 87
Query: 161 TKVFACLFVLVGFGFIDILLSGVVN 185
A L + VG I + V
Sbjct: 88 AHAIATLEIFVGMSGIALSTGLVFA 112
Score = 41.9 bits (98), Expect = 1e-05
Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 221 RMRIRLKVGLALGVVVLCIAIGALILF-------FLEDLDWLDSFYLSVMSVTTVGYGDR 273
++ + + V+ + AL+ ++ +F+ SV ++ TVGYGD
Sbjct: 22 KVSWPVFFASLAALFVVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDM 81
Query: 274 AFKTLPGRFFAAIWLLFSTLMVA 296
+T+ A + + +A
Sbjct: 82 HPQTVYAHAIATLEIFVGMSGIA 104
>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel
kirbac3.1 {Magnetospirillum magnetotacticum [TaxId:
188]}
Length = 116
Score = 52.3 bits (125), Expect = 3e-09
Identities = 20/85 (23%), Positives = 30/85 (35%)
Query: 101 IIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPA 160
I L + + + Y D DA +F + TM TIGYG + P+ P
Sbjct: 27 FITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPL 86
Query: 161 TKVFACLFVLVGFGFIDILLSGVVN 185
L L G + + S +
Sbjct: 87 ANTLVTLEALCGMLGLAVAASLIYA 111
Score = 46.5 bits (110), Expect = 3e-07
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 221 RMRIRLKVGLALGVVVLCIAIGALILFFLEDL-------DWLDSFYLSVMSVTTVGYGDR 273
+ + + L G+ ++ A+ AL D+ + D+F+ SV ++ T+GYG
Sbjct: 21 TVSWPVFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKL 80
Query: 274 AFKTLPGRFFAAIWLLFSTLMVA 296
+ L L +A
Sbjct: 81 IPIGPLANTLVTLEALCGMLGLA 103
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 77
Score = 34.5 bits (79), Expect = 0.002
Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 324 TIDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKIT 379
+ +++L A D +++G I+ + KE+G+ ++ D N+ +I
Sbjct: 7 SREEILKAFRLFDDDNSGTITIKDLRRV-AKELGE--NLTEEELQEMIAEADRNDDNEID 63
Query: 380 LPDLLE 385
+ +
Sbjct: 64 EDEFIR 69
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac
isoform [TaxId: 9031]}
Length = 81
Score = 33.8 bits (77), Expect = 0.005
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D N +G+I E I I E DI ++ D NN G+I + LE
Sbjct: 25 DKNADGYIDLEELKIMLQATGETITEDDIEEL---MKDGDKNNDGRIDYDEFLE 75
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 87
Score = 33.8 bits (77), Expect = 0.005
Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 306 RIDKRHRRIAKWVLQREITIDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDIS 361
ID + +A+ + + EI L D +++G I+ E + ++ E +I
Sbjct: 5 HIDDDDKHMAERLSEEEI--GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIK 62
Query: 362 QICNQFNRLDPNNCGKITLPDLLE 385
+ + D + G I + +
Sbjct: 63 DLMDAA---DIDKSGTIDYGEFIA 83
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 75
Score = 33.0 bits (75), Expect = 0.007
Identities = 13/54 (24%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D N +GFI E I + D NN G+I + L+
Sbjct: 19 DKNADGFIDIEE---LGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 69
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces
coelicolor [TaxId: 1902]}
Length = 57
Score = 32.1 bits (73), Expect = 0.008
Identities = 13/48 (27%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Query: 105 AFVLLSIYLFVG-VVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGY 151
A VLL I L G + AL++ T T+GY
Sbjct: 11 ATVLLVIVLLAGSYLAVLAERGAPGAQLIT-YPRALWWACETATTVGY 57
Score = 31.4 bits (71), Expect = 0.020
Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 228 VGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGY 270
G A ++V+ + G+ + E + + + + + + TTVGY
Sbjct: 8 AGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETATTVGY 57
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus
(Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 68
Score = 32.5 bits (74), Expect = 0.010
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 326 DDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDIS--QICNQFNRLDPNNCGKIT 379
+++L A D N +G I E+ M K+GE+ ++ ++ D + G I
Sbjct: 2 EEILRAFKVFDANGDGVIDFDEFK----FIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 57
Query: 380 LPDLLE 385
+P+ ++
Sbjct: 58 IPEFMD 63
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 81
Score = 32.6 bits (74), Expect = 0.012
Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 7/65 (10%)
Query: 325 IDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITL 380
I + AA D + G IS E ++++ I +D + G I
Sbjct: 13 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAI---IEEVDEDGSGTIDF 69
Query: 381 PDLLE 385
+ L
Sbjct: 70 EEFLV 74
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium
album) [TaxId: 3559]}
Length = 81
Score = 32.2 bits (73), Expect = 0.017
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D N +G IS SE + +G ++ +D + G I+ + +
Sbjct: 16 DTNGDGKISSSELGDA----LKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTD 65
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 162
Score = 33.4 bits (75), Expect = 0.018
Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
Query: 317 WVLQREITIDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDP 372
+ + ++L D N +GFI E + E+DI + D
Sbjct: 87 KEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDL---MKDSDK 143
Query: 373 NNCGKITLPDLLE 385
NN G+I + L+
Sbjct: 144 NNDGRIDFDEFLK 156
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 67
Score = 31.1 bits (70), Expect = 0.026
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D N +G +S E+ L ++DI + F +D + G++ +
Sbjct: 11 DKNKDGKLSLDEFREVALAFSPYFTQEDIVKF---FEEIDVDGNGELNADEFTS 61
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 109
Score = 32.2 bits (73), Expect = 0.026
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQ-FNRLDPNNCGKITLPD 382
D + +GFI + E LK G D + GKI + +
Sbjct: 51 DADASGFIEEEELKFV-LKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 101
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId:
10117]}
Length = 109
Score = 32.3 bits (73), Expect = 0.027
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQ-FNRLDPNNCGKITLPDLLE 385
D + +GFI + E LK ++ D + GKI + +
Sbjct: 51 DKDKSGFIEEDELGSI-LKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 107
Score = 31.8 bits (72), Expect = 0.033
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 324 TIDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQ-FNRLDPNNCGKI 378
++DD+ A D + +GFI + E +F L+ D + G I
Sbjct: 38 SLDDVKKAFYVIDQDKSGFIEEDELKLF-LQNFSPSARALTDAETKAFLADGDKDGDGMI 96
Query: 379 TLPDLLE 385
+ +
Sbjct: 97 GVDEFAA 103
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding
protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 33.4 bits (75), Expect = 0.038
Identities = 8/55 (14%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 332 DMNHNGFISKSE-YVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D + +G +SK E + + + + K F+ +D ++ ++ + +
Sbjct: 263 DFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQ---FSVVDVDDSKSLSYQEFVM 314
Score = 26.9 bits (58), Expect = 5.1
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 355 IGEKDISQICNQFNRLDPNNCGKITLPDL 383
+ E+D + + F + GK + DL
Sbjct: 116 LSEEDTNILRQLFLSSAVSGSGKFSFQDL 144
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis
semifasciata) [TaxId: 30493]}
Length = 109
Score = 31.5 bits (71), Expect = 0.043
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 324 TIDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEK-DISQICNQFNRLDPNNCGKI 378
T + D + +GFI + E LK G + ++ D ++ GKI
Sbjct: 39 TDAQVKEVFEILDKDQSGFIEEEELKGV-LKGFSAHGRDLNDTETKALLAAGDSDHDGKI 97
Query: 379 TLPDLLE 385
+ +
Sbjct: 98 GADEFAK 104
>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 108
Score = 31.5 bits (71), Expect = 0.043
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 324 TIDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKIT 379
+ + D + +G++ E F K E S+ + + D + GKI
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIG 98
Query: 380 LPDLLE 385
+ E
Sbjct: 99 ADEFQE 104
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 77
Score = 30.4 bits (68), Expect = 0.055
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Query: 325 IDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITL 380
I + A D ++NG IS SE E +++ + N +D + +I
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDL---MNEIDVDGNHQIEF 65
Query: 381 PDLLE 385
+ L
Sbjct: 66 SEFLA 70
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 190
Score = 32.1 bits (72), Expect = 0.073
Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 13/92 (14%)
Query: 307 IDKRHRRIAKWVLQREITIDDLLAA----DMNHNGFISKSE---YVIFKLKEMGKIGEKD 359
I R + L A D+NH+G+I+ E V K MG + +
Sbjct: 80 IHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLN 139
Query: 360 ISQ------ICNQFNRLDPNNCGKITLPDLLE 385
+ + F +D N G ITL + E
Sbjct: 140 EDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171
Score = 28.2 bits (62), Expect = 1.2
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D ++NGFI E++ E+ +S F D N+ G IT ++L
Sbjct: 71 VFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWA---FELYDLNHDGYITFDEMLT 123
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 156
Score = 31.1 bits (69), Expect = 0.12
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D N +G+I E I I E DI ++ D NN G+I + LE
Sbjct: 101 DKNADGYIDLEELKIMLQATGETITEDDIEEL---MKDGDKNNDGRIDYDEFLE 151
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId:
9913]}
Length = 61
Score = 28.5 bits (63), Expect = 0.19
Identities = 10/64 (15%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 326 DDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLP 381
+D + A D G +S + + L +G+ + +++ ++ ++ G+I
Sbjct: 1 EDFVKAFQVFDKESTGKVSV-GDLRYMLTGLGE--KLTDAEVDELLKGVEVDSNGEIDYK 57
Query: 382 DLLE 385
+E
Sbjct: 58 KFIE 61
>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 99
Score = 29.6 bits (66), Expect = 0.19
Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 13/67 (19%)
Query: 332 DMNHNGFISKSE------------YVIFKLKEMGKIGEKDISQICNQ-FNRLDPNNCGKI 378
D+N +G + + E Y ++ + E++ ++ +D N +
Sbjct: 26 DINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLV 85
Query: 379 TLPDLLE 385
TL + L
Sbjct: 86 TLEEFLA 92
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia)
[TaxId: 5888]}
Length = 146
Score = 30.2 bits (67), Expect = 0.21
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D + NG IS +E K+ + ++ ++ D + G I + +
Sbjct: 92 DRDGNGLISAAELRHVMTNLGEKLTDDEVDEM---IREADIDGDGHINYEEFVR 142
Score = 27.9 bits (61), Expect = 1.4
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPD 382
D + +G I+ E E ++ + N+ D + G I P+
Sbjct: 19 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV---DADGNGTIDFPE 66
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 146
Score = 29.0 bits (64), Expect = 0.54
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D N +G IS +E + IGEK + R + G+I +
Sbjct: 93 DKNGDGLISAAELKHV----LTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAA 142
Score = 25.6 bits (55), Expect = 8.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 357 EKDISQICNQFNRLDPNNCGKITLPDL 383
E+ I++ F D +N G I+ +L
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSEL 32
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 165
Score = 28.9 bits (63), Expect = 0.66
Identities = 6/31 (19%), Positives = 17/31 (54%)
Query: 357 EKDISQICNQFNRLDPNNCGKITLPDLLENH 387
+I ++ +F +LD +N G +++ + +
Sbjct: 12 ADEIKRLGKRFKKLDLDNSGSLSVEEFMSLP 42
>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens),
psoriasin s100a7 [TaxId: 9606]}
Length = 100
Score = 27.6 bits (61), Expect = 0.76
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Query: 319 LQREI-TIDDLLAADMNHNGFISKSEYVIFKLKEMG----KIGEKDISQICNQFNRLDPN 373
+R I + D+ + I K + + +K + + + F + D N
Sbjct: 5 AERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKN 64
Query: 374 NCGKITLPDLLE 385
KI + L
Sbjct: 65 EDKKIDFSEFLS 76
>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 139
Score = 28.4 bits (62), Expect = 0.85
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 311 HRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNR 369
+ E ++ D NG + +E L+ + +GEK +
Sbjct: 66 AVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAE-----LRHVLTTLGEKMTEEEVETVLA 120
Query: 370 LDPNNCGKITLPDLLE 385
++ G I L+
Sbjct: 121 GHEDSNGCINYEAFLK 136
Score = 25.3 bits (54), Expect = 8.9
Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 306 RIDKRHRRIAKWVLQREIT---IDDLLAADMNHNGFISKSEYV 345
++ R L ++T ++ +LA + NG I+ ++
Sbjct: 93 KVMGAELRHVLTTLGEKMTEEEVETVLAGHEDSNGCINYEAFL 135
Score = 25.3 bits (54), Expect = 9.7
Identities = 6/56 (10%), Positives = 14/56 (25%), Gaps = 1/56 (1%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLENH 387
D +G I S+ ++ ++ D ++ L
Sbjct: 10 DRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKS-DELKSRRVDFETFLPML 64
>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId:
9913]}
Length = 76
Score = 27.2 bits (60), Expect = 0.89
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
++ AA ISK E + ++ +G K +S + +D N G+++ + L
Sbjct: 12 EVFAAKEGDPNQISKEELKLV-MQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLV 69
>d2olua1 d.2.1.10 (A:68-292) Penicillin-binding protein 2, PBP2
{Staphylococcus aureus [TaxId: 1280]}
Length = 225
Score = 28.6 bits (63), Expect = 1.1
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 13/91 (14%)
Query: 254 WLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRR 313
+L+ Y S F A + L + + R+
Sbjct: 124 YLNKIYYSDGVTGIKAAAKYYFNKDLKDLNLAEEAYLAGLPQVPNNYNIYDHPKAAEDRK 183
Query: 314 IAKWVLQREITIDDLLAADMNHNGFISKSEY 344
VL M+++ I+ ++
Sbjct: 184 --NTVLYL-----------MHYHKRITDKQW 201
>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium
thermocellum [TaxId: 1515]}
Length = 59
Score = 26.2 bits (58), Expect = 1.2
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 322 EITIDDLLAADMNHNGFISKSEYVIFKLKEMGKI 355
+T D AD++ NG I+ ++ ++ + I
Sbjct: 26 TLTDDAKARADVDKNGSINAADVLLLSRYLLRVI 59
>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 181
Score = 28.1 bits (61), Expect = 1.2
Identities = 8/50 (16%), Positives = 19/50 (38%), Gaps = 9/50 (18%)
Query: 331 ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITL 380
D G I+ +++ + + ++ + F R D + G I +
Sbjct: 131 FDRQGRGQIAFDDFIQGCIV---------LQRLTDIFRRYDTDQDGWIQV 171
>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 185
Score = 28.4 bits (62), Expect = 1.2
Identities = 7/54 (12%), Positives = 17/54 (31%), Gaps = 5/54 (9%)
Query: 332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
D++ +G + E+ + K + + +N + L E
Sbjct: 115 DVSGDGIVDLEEFQNY-CKNFQL----QCADVPAVYNVITDGGKVTFDLNRYKE 163
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Length = 65
Score = 26.5 bits (58), Expect = 1.3
Identities = 10/64 (15%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 326 DDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLP 381
+++ A D + NG+IS +E K+ ++++ ++ + D + G++
Sbjct: 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA---DIDGDGQVNYE 59
Query: 382 DLLE 385
+ ++
Sbjct: 60 EFVQ 63
>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium
thermocellum [TaxId: 1515]}
Length = 71
Score = 26.2 bits (58), Expect = 1.4
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 321 REITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGE 357
R + AD+N +G ++ ++ I K + +I
Sbjct: 29 RSGISINTDNADLNEDGRVNSTDLGILKRYILKEIDT 65
>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 182
Score = 28.1 bits (61), Expect = 1.4
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 354 KIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
++ E++I + F +D +N G IT +L +
Sbjct: 3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKD 34
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId:
10116]}
Length = 73
Score = 26.5 bits (58), Expect = 1.6
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 7/65 (10%)
Query: 325 IDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITL 380
I + A D + +G I+ E E ++ + N +D + G I
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM---INEVDADGNGTIDF 63
Query: 381 PDLLE 385
P+ L
Sbjct: 64 PEFLT 68
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 187
Score = 27.9 bits (61), Expect = 1.6
Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Query: 332 DMNHNGFISKSE---------YVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPD 382
D++++G+I+++E ++ E+ + ++ F +D N GK+TL +
Sbjct: 106 DLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQE 165
Query: 383 LLE 385
E
Sbjct: 166 FQE 168
>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 178
Score = 27.5 bits (60), Expect = 1.8
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 332 DMNHNGFISKSE--------YVIFKLKEMGKIGEKDISQICNQ-FNRLDPNNCGKITLPD 382
D+N +G+I+K E Y + + E Q + F ++D N G +TL +
Sbjct: 97 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDE 156
Query: 383 LLE 385
LE
Sbjct: 157 FLE 159
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima
[TaxId: 2336]}
Length = 429
Score = 27.5 bits (60), Expect = 2.8
Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Query: 275 FKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRH-----RRIAKWVLQREITIDDLL 329
K R I L + R L L E + ++ +R A E + L
Sbjct: 333 MKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYL 392
Query: 330 AADMNHNGFISKSE 343
D ++K E
Sbjct: 393 LEDEEVKKLVTKEE 406
>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal
domain (domain IV) {Rat (Rattus norvegicus), M-type
[TaxId: 10116]}
Length = 186
Score = 27.0 bits (59), Expect = 3.0
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 13/61 (21%)
Query: 322 EITIDDLLAADMNHNGFISKSEYV--IFKLKEMGKIGEKDISQICNQFNRLDPNNCGKIT 379
++A + I +V + +L+ + KI F +LDP N G I
Sbjct: 126 CQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKI-----------FKQLDPENTGTIQ 174
Query: 380 L 380
L
Sbjct: 175 L 175
>d1dw0a_ a.3.1.1 (A:) SHP, an oxygen binding cytochrome c
{Rhodobacter sphaeroides [TaxId: 1063]}
Length = 112
Score = 26.4 bits (58), Expect = 3.1
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 304 EARIDKRHRRIAKWVLQREIT 324
AR++K R V+ R+ T
Sbjct: 78 SARVEKWLGRNCNSVIGRDCT 98
>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Sandworm (Nereis diversicolor) [TaxId: 126592]}
Length = 174
Score = 26.9 bits (58), Expect = 3.3
Identities = 6/64 (9%), Positives = 16/64 (25%), Gaps = 8/64 (12%)
Query: 332 DMNHNGFISKSEYV--------IFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL 383
D + +G I++ ++ ++K D I
Sbjct: 16 DFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTF 75
Query: 384 LENH 387
+ +
Sbjct: 76 INSM 79
Score = 26.6 bits (57), Expect = 4.6
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 357 EKDISQICNQFNRLDPNNCGKITLPDLLE 385
+ + ++ FNR+D + G IT D
Sbjct: 2 DLWVQKMKTYFNRIDFDKDGAITRMDFES 30
>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa
(Obelia longissima), obelin [TaxId: 32570]}
Length = 189
Score = 26.9 bits (58), Expect = 3.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 357 EKDISQICNQFNRLDPNNCGKITLPDLLE 385
+ I + + F+ LD N GKITL +++
Sbjct: 10 PRWIKRHKHMFDFLDINGNGKITLDEIVS 38
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens),
s100a4 [TaxId: 9606]}
Length = 93
Score = 25.6 bits (56), Expect = 3.6
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 10/52 (19%)
Query: 322 EITIDDLLA-ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDP 372
E L++ D N + + EY +F + I+ +CN+F P
Sbjct: 51 EAAFQKLMSNLDSNRDNEVDFQEYCVF----LSC-----IAMMCNEFFEGFP 93
>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal
domain (domain IV) {Rat (Rattus norvegicus), mu-type
[TaxId: 10116]}
Length = 188
Score = 27.0 bits (59), Expect = 3.6
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 13/58 (22%)
Query: 325 IDDLLAADMNHNGFISKSEYVIF--KLKEMGKIGEKDISQICNQFNRLDPNNCGKITL 380
++A + I +V +L+ + KI F +LDP N G I L
Sbjct: 131 HQVIVARFADDELIIDFDNFVRCLVRLEILFKI-----------FKQLDPENTGTIQL 177
>d1gu2a_ a.3.1.1 (A:) Cytochrome c'' {Methylophilus methylotrophus,
strain w3a1 [TaxId: 17]}
Length = 124
Score = 26.0 bits (57), Expect = 3.9
Identities = 1/21 (4%), Positives = 8/21 (38%)
Query: 304 EARIDKRHRRIAKWVLQREIT 324
+++ + +L + +
Sbjct: 85 IDKVEDEFTKHCNDILGADCS 105
>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB
{Human (Homo sapiens) [TaxId: 9606]}
Length = 180
Score = 26.7 bits (58), Expect = 4.3
Identities = 8/60 (13%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 332 DMNHNGFISKSEYV-----IFKLKEMGKIGEKDISQICNQ-FNRLDPNNCGKITLPDLLE 385
D + +G +++ + + E ++ ++ Q+ + D + G I L +
Sbjct: 105 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 164
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica)
[TaxId: 5759]}
Length = 134
Score = 26.2 bits (56), Expect = 4.7
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 307 IDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKL 349
+ K E + ++ AD N +G+I+ E++ F L
Sbjct: 92 LTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFSL 134
>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 183
Score = 26.4 bits (57), Expect = 4.9
Identities = 16/70 (22%), Positives = 20/70 (28%), Gaps = 15/70 (21%)
Query: 332 DMNHNGFISKSE-----YVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITL------ 380
D+ GFI + E M I F D + GKI
Sbjct: 101 DLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSL 160
Query: 381 ----PDLLEN 386
P LL+N
Sbjct: 161 VLRHPSLLKN 170
>d1b4aa1 a.4.5.3 (A:4-78) Arginine repressor (ArgR), N-terminal
DNA-binding domain {Bacillus stearothermophilus [TaxId:
1422]}
Length = 75
Score = 24.8 bits (54), Expect = 5.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 309 KRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMG 353
+RH +I + ++ +I D L + GF V +KEM
Sbjct: 2 QRHIKIREIIMSNDIETQDELVDRLREAGFNVTQATVSRDIKEMQ 46
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein
{Jellyfish (Aequorea aequorea), aequorin [TaxId:
168712]}
Length = 187
Score = 26.1 bits (56), Expect = 5.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 357 EKDISQICNQFNRLDPNNCGKITLPDLLE 385
+ I + + FN LD N+ GKI+L +++
Sbjct: 8 PRWIGRHKHMFNFLDVNHNGKISLDEMVY 36
>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein
{Leishmania major [TaxId: 5664]}
Length = 182
Score = 26.2 bits (56), Expect = 6.5
Identities = 9/71 (12%), Positives = 22/71 (30%), Gaps = 9/71 (12%)
Query: 310 RHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNR 369
+ + + + + D G + +YV + + ++ N F
Sbjct: 108 AALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF---------VCRVRNVFAF 158
Query: 370 LDPNNCGKITL 380
D G++T
Sbjct: 159 YDRERTGQVTF 169
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia
pestis [TaxId: 632]}
Length = 353
Score = 26.3 bits (56), Expect = 6.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 363 ICNQFNRLDPNNCGKITLPDLLEN 386
+ Q + L+ NN G +LP+L +
Sbjct: 36 LDRQAHELELNNLGLSSLPELPPH 59
>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 170
Score = 25.8 bits (56), Expect = 7.3
Identities = 9/63 (14%), Positives = 14/63 (22%), Gaps = 9/63 (14%)
Query: 329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQ----FNRLDPNNCGKITLPDLL 384
L +N G I +M K + + + D N P
Sbjct: 14 LKMQLNSEGKIPVKN-----FFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYK 68
Query: 385 ENH 387
Sbjct: 69 SFL 71
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 141
Score = 25.7 bits (55), Expect = 7.8
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 357 EKDISQICNQFNRLDPNNCGKITLPDLLENH 387
E+ +I F+ D + G I + +L
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAM 32
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.140 0.418
Gapped
Lambda K H
0.267 0.0576 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,460,135
Number of extensions: 68886
Number of successful extensions: 366
Number of sequences better than 10.0: 1
Number of HSP's gapped: 348
Number of HSP's successfully gapped: 77
Length of query: 388
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 301
Effective length of database: 1,213,086
Effective search space: 365138886
Effective search space used: 365138886
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (24.9 bits)