Query 016533
Match_columns 388
No_of_seqs 358 out of 2469
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 07:42:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016533.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016533hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.4E-33 3E-38 249.9 20.7 271 68-386 8-293 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 2E-32 4.2E-37 240.2 17.1 257 72-387 6-266 (276)
3 PLN02385 hydrolase; alpha/beta 100.0 7.4E-32 1.6E-36 244.0 20.8 271 65-386 58-344 (349)
4 PRK03592 haloalkane dehalogena 100.0 5.4E-32 1.2E-36 239.9 19.0 270 69-386 8-288 (295)
5 PRK00870 haloalkane dehalogena 100.0 1.2E-31 2.7E-36 238.2 21.3 269 65-387 16-301 (302)
6 PRK03204 haloalkane dehalogena 100.0 4.1E-31 8.8E-36 232.3 23.2 269 66-385 12-286 (286)
7 PLN02578 hydrolase 100.0 4E-31 8.7E-36 239.2 21.6 277 72-386 70-354 (354)
8 KOG4178 Soluble epoxide hydrol 100.0 4.7E-31 1E-35 222.3 20.1 281 68-387 22-320 (322)
9 PRK06489 hypothetical protein; 100.0 2.9E-31 6.2E-36 240.9 20.3 291 52-386 25-356 (360)
10 PLN03087 BODYGUARD 1 domain co 100.0 1.5E-30 3.3E-35 238.6 24.6 304 52-386 160-478 (481)
11 PLN02679 hydrolase, alpha/beta 100.0 2.4E-31 5.2E-36 240.9 19.1 276 72-386 65-356 (360)
12 PRK10673 acyl-CoA esterase; Pr 100.0 6.3E-31 1.4E-35 228.3 19.2 252 80-387 2-255 (255)
13 PLN02965 Probable pheophorbida 100.0 8.7E-31 1.9E-35 227.0 18.6 243 95-386 4-252 (255)
14 TIGR03343 biphenyl_bphD 2-hydr 100.0 3.4E-30 7.4E-35 227.1 21.6 259 78-386 19-282 (282)
15 PLN02298 hydrolase, alpha/beta 100.0 2.4E-30 5.2E-35 232.8 18.8 270 62-386 26-316 (330)
16 TIGR03056 bchO_mg_che_rel puta 100.0 1.5E-29 3.3E-34 222.5 23.4 265 72-385 10-278 (278)
17 PRK10349 carboxylesterase BioH 100.0 6.6E-31 1.4E-35 228.1 14.6 250 81-385 4-254 (256)
18 PLN03084 alpha/beta hydrolase 100.0 7.2E-30 1.6E-34 229.9 20.8 277 65-386 101-383 (383)
19 TIGR03611 RutD pyrimidine util 100.0 1.5E-29 3.2E-34 219.7 19.2 254 81-386 1-257 (257)
20 PRK10749 lysophospholipase L2; 100.0 2E-29 4.4E-34 226.1 20.6 273 71-388 33-330 (330)
21 PHA02857 monoglyceride lipase; 100.0 6.8E-29 1.5E-33 218.0 22.5 257 72-386 4-272 (276)
22 TIGR02427 protocat_pcaD 3-oxoa 100.0 3.6E-29 7.7E-34 216.2 17.8 248 81-385 2-251 (251)
23 PRK08775 homoserine O-acetyltr 100.0 6.7E-29 1.4E-33 224.0 18.2 267 77-386 44-338 (343)
24 PRK07581 hypothetical protein; 100.0 7.7E-29 1.7E-33 223.7 18.1 274 77-386 24-335 (339)
25 TIGR01250 pro_imino_pep_2 prol 100.0 6.4E-28 1.4E-32 212.9 21.8 267 72-385 6-288 (288)
26 TIGR01392 homoserO_Ac_trn homo 100.0 1.6E-28 3.4E-33 222.4 16.6 280 77-385 14-351 (351)
27 KOG1455 Lysophospholipase [Lip 100.0 7.8E-28 1.7E-32 199.5 18.9 272 66-387 25-312 (313)
28 PRK11126 2-succinyl-6-hydroxy- 100.0 2.8E-28 6E-33 210.0 16.8 236 94-386 2-241 (242)
29 KOG4409 Predicted hydrolase/ac 100.0 6E-28 1.3E-32 203.9 17.3 127 68-213 65-196 (365)
30 KOG1454 Predicted hydrolase/ac 100.0 5.5E-28 1.2E-32 213.0 17.7 281 69-386 26-323 (326)
31 PLN02211 methyl indole-3-aceta 100.0 3E-27 6.5E-32 205.8 21.9 259 76-385 4-268 (273)
32 COG2267 PldB Lysophospholipase 100.0 1.3E-27 2.9E-32 208.6 19.5 270 67-387 8-294 (298)
33 TIGR01249 pro_imino_pep_1 prol 100.0 1.8E-27 3.9E-32 211.5 20.3 123 69-212 5-130 (306)
34 PRK00175 metX homoserine O-ace 100.0 5E-28 1.1E-32 220.6 16.8 298 77-387 31-374 (379)
35 TIGR01738 bioH putative pimelo 100.0 5.4E-28 1.2E-32 208.1 15.6 239 94-384 4-245 (245)
36 PLN02652 hydrolase; alpha/beta 100.0 3.3E-27 7.1E-32 214.1 18.5 262 71-386 113-386 (395)
37 PLN02894 hydrolase, alpha/beta 100.0 2E-26 4.4E-31 210.8 23.3 121 72-212 83-211 (402)
38 PF12697 Abhydrolase_6: Alpha/ 99.9 1.9E-27 4.1E-32 202.1 12.9 221 97-379 1-228 (228)
39 KOG2984 Predicted hydrolase [G 99.9 2.1E-27 4.5E-32 183.7 10.2 251 67-388 20-277 (277)
40 TIGR03695 menH_SHCHC 2-succiny 99.9 3.9E-26 8.4E-31 197.0 18.2 244 94-385 1-251 (251)
41 PLN02511 hydrolase 99.9 2.4E-26 5.1E-31 209.6 16.9 273 67-385 70-363 (388)
42 PRK14875 acetoin dehydrogenase 99.9 4.9E-26 1.1E-30 208.6 17.2 252 77-386 117-370 (371)
43 PRK05855 short chain dehydroge 99.9 4.6E-25 1E-29 214.3 20.1 276 72-386 6-291 (582)
44 TIGR01607 PST-A Plasmodium sub 99.9 1.4E-24 3E-29 194.1 18.7 277 73-386 2-332 (332)
45 PLN02980 2-oxoglutarate decarb 99.9 7.4E-25 1.6E-29 229.5 19.1 257 81-387 1360-1639(1655)
46 PRK06765 homoserine O-acetyltr 99.9 1.2E-24 2.6E-29 196.5 15.9 294 77-387 39-388 (389)
47 COG1647 Esterase/lipase [Gener 99.9 5.6E-24 1.2E-28 167.9 15.5 221 94-386 15-243 (243)
48 PRK05077 frsA fermentation/res 99.9 2.1E-23 4.5E-28 191.0 21.3 239 67-386 167-411 (414)
49 KOG2382 Predicted alpha/beta h 99.9 1.8E-23 4E-28 176.7 18.5 253 93-387 51-313 (315)
50 PRK10985 putative hydrolase; P 99.9 5E-23 1.1E-27 184.1 22.0 272 69-385 32-318 (324)
51 PRK13604 luxD acyl transferase 99.9 7.7E-23 1.7E-27 175.1 19.5 126 69-213 10-142 (307)
52 KOG4391 Predicted alpha/beta h 99.9 2.6E-22 5.6E-27 157.3 16.0 223 65-386 51-281 (300)
53 PLN02872 triacylglycerol lipas 99.9 6.6E-22 1.4E-26 178.7 18.0 138 64-213 40-198 (395)
54 PF00561 Abhydrolase_1: alpha/ 99.9 1.6E-22 3.4E-27 172.6 9.6 218 138-381 1-229 (230)
55 TIGR03100 hydr1_PEP hydrolase, 99.9 1.8E-20 4E-25 163.4 20.2 116 77-212 10-134 (274)
56 TIGR01838 PHA_synth_I poly(R)- 99.9 1.6E-20 3.5E-25 174.3 19.4 284 68-372 162-459 (532)
57 KOG1552 Predicted alpha/beta h 99.9 1.3E-20 2.8E-25 153.7 16.0 211 68-385 35-250 (258)
58 PRK11071 esterase YqiA; Provis 99.9 2.4E-20 5.2E-25 152.8 16.6 186 95-385 2-189 (190)
59 TIGR01836 PHA_synth_III_C poly 99.9 3.6E-20 7.8E-25 167.7 19.3 106 93-214 61-173 (350)
60 PRK10566 esterase; Provisional 99.8 1.1E-19 2.4E-24 157.0 14.9 100 93-209 26-139 (249)
61 COG0596 MhpC Predicted hydrola 99.8 2.3E-18 5E-23 149.6 20.3 267 77-385 8-280 (282)
62 KOG4667 Predicted esterase [Li 99.8 8.5E-19 1.8E-23 137.7 15.0 220 94-385 33-256 (269)
63 PF12695 Abhydrolase_5: Alpha/ 99.8 3.3E-19 7.2E-24 140.6 13.0 142 96-368 1-145 (145)
64 PRK07868 acyl-CoA synthetase; 99.8 2E-18 4.4E-23 175.6 21.3 266 93-386 66-360 (994)
65 COG2021 MET2 Homoserine acetyl 99.8 1.6E-18 3.5E-23 148.9 16.5 290 77-386 34-367 (368)
66 KOG2564 Predicted acetyltransf 99.8 2.4E-19 5.2E-24 146.4 10.8 115 80-211 61-181 (343)
67 COG0429 Predicted hydrolase of 99.8 2.9E-18 6.2E-23 144.8 15.1 273 69-385 50-338 (345)
68 KOG1838 Alpha/beta hydrolase [ 99.8 1.4E-16 3.1E-21 139.8 21.2 276 65-385 90-386 (409)
69 PRK11460 putative hydrolase; P 99.8 3E-17 6.6E-22 139.2 16.0 173 91-385 13-210 (232)
70 TIGR03101 hydr2_PEP hydrolase, 99.8 1.4E-17 3E-22 142.4 13.9 126 72-212 4-134 (266)
71 TIGR02821 fghA_ester_D S-formy 99.7 1.7E-16 3.6E-21 138.6 19.8 122 77-212 23-173 (275)
72 KOG2931 Differentiation-relate 99.7 3.5E-16 7.6E-21 129.2 18.7 272 68-386 22-305 (326)
73 PF06342 DUF1057: Alpha/beta h 99.7 7.9E-16 1.7E-20 127.5 19.8 112 83-213 25-138 (297)
74 PLN02442 S-formylglutathione h 99.7 2.7E-16 5.8E-21 137.6 17.7 123 77-213 28-179 (283)
75 PF03096 Ndr: Ndr family; Int 99.7 7.1E-17 1.5E-21 135.6 13.1 263 71-386 2-278 (283)
76 COG1506 DAP2 Dipeptidyl aminop 99.7 2.3E-16 4.9E-21 152.3 16.5 232 67-386 364-615 (620)
77 COG3208 GrsT Predicted thioest 99.7 4.7E-16 1E-20 126.4 12.9 222 93-385 6-234 (244)
78 PF00326 Peptidase_S9: Prolyl 99.7 3.8E-16 8.1E-21 131.4 11.0 184 129-386 6-208 (213)
79 PF06500 DUF1100: Alpha/beta h 99.7 1.8E-15 3.9E-20 134.0 14.1 131 66-213 163-297 (411)
80 TIGR01839 PHA_synth_II poly(R) 99.6 1.6E-14 3.5E-19 132.9 19.8 135 68-217 189-333 (560)
81 TIGR01840 esterase_phb esteras 99.6 5.1E-15 1.1E-19 124.2 15.3 107 93-212 12-130 (212)
82 PLN00021 chlorophyllase 99.6 2.1E-14 4.5E-19 126.3 15.0 113 81-212 39-166 (313)
83 TIGR00976 /NonD putative hydro 99.6 8.2E-14 1.8E-18 133.4 17.9 124 74-213 2-133 (550)
84 PF06821 Ser_hydrolase: Serine 99.6 2.4E-14 5.1E-19 114.4 11.1 161 97-378 1-164 (171)
85 TIGR01849 PHB_depoly_PhaZ poly 99.6 3.1E-13 6.7E-18 121.1 19.0 258 94-386 102-405 (406)
86 COG2945 Predicted hydrolase of 99.6 1.7E-13 3.6E-18 106.6 14.9 177 92-385 26-205 (210)
87 PF02230 Abhydrolase_2: Phosph 99.6 2.5E-14 5.4E-19 120.3 11.3 178 89-386 9-214 (216)
88 PF01738 DLH: Dienelactone hyd 99.6 5.5E-14 1.2E-18 118.6 13.0 175 92-386 12-216 (218)
89 TIGR03230 lipo_lipase lipoprot 99.6 4E-14 8.7E-19 128.2 12.5 105 93-213 40-155 (442)
90 PRK10162 acetyl esterase; Prov 99.6 9E-13 2E-17 117.4 20.8 127 68-213 57-196 (318)
91 cd00707 Pancreat_lipase_like P 99.5 2E-14 4.4E-19 124.7 7.9 122 73-213 19-148 (275)
92 KOG2624 Triglyceride lipase-ch 99.5 1.5E-12 3.2E-17 116.5 18.3 136 65-212 45-199 (403)
93 PF05448 AXE1: Acetyl xylan es 99.5 1.2E-12 2.7E-17 115.3 16.3 237 67-386 55-319 (320)
94 COG3458 Acetyl esterase (deace 99.5 7.3E-13 1.6E-17 108.5 13.1 228 70-385 58-315 (321)
95 COG0400 Predicted esterase [Ge 99.5 7.6E-13 1.7E-17 108.1 12.7 107 89-212 13-134 (207)
96 PF12146 Hydrolase_4: Putative 99.5 1.3E-13 2.8E-18 94.6 6.3 77 78-171 1-79 (79)
97 COG0412 Dienelactone hydrolase 99.5 1.2E-11 2.7E-16 104.4 18.7 122 72-211 6-145 (236)
98 PF08538 DUF1749: Protein of u 99.4 3.6E-13 7.7E-18 114.6 8.8 103 93-214 32-150 (303)
99 PF00975 Thioesterase: Thioest 99.4 1.7E-12 3.6E-17 110.6 13.0 100 95-211 1-103 (229)
100 PF10230 DUF2305: Uncharacteri 99.4 9E-12 1.9E-16 107.5 17.4 105 94-213 2-123 (266)
101 PRK10115 protease 2; Provision 99.4 1.3E-11 2.8E-16 120.4 20.2 133 66-213 414-560 (686)
102 KOG2565 Predicted hydrolases o 99.4 3.3E-12 7.3E-17 109.0 11.8 120 77-212 132-264 (469)
103 PF05728 UPF0227: Uncharacteri 99.4 4.7E-11 1E-15 96.4 17.2 89 97-213 2-92 (187)
104 PF02273 Acyl_transf_2: Acyl t 99.4 1E-11 2.2E-16 100.3 12.0 124 71-213 5-135 (294)
105 COG3243 PhaC Poly(3-hydroxyalk 99.4 2.4E-11 5.1E-16 106.5 14.6 253 93-371 106-373 (445)
106 TIGR03502 lipase_Pla1_cef extr 99.3 4.2E-12 9.1E-17 122.2 9.9 111 72-198 421-576 (792)
107 COG4757 Predicted alpha/beta h 99.3 3.6E-11 7.9E-16 96.3 11.8 121 71-210 8-136 (281)
108 PF02129 Peptidase_S15: X-Pro 99.3 1E-11 2.2E-16 108.4 9.5 131 77-214 1-138 (272)
109 COG3571 Predicted hydrolase of 99.3 3.2E-10 6.8E-15 85.5 15.9 103 93-210 13-122 (213)
110 PF07859 Abhydrolase_3: alpha/ 99.3 3.3E-11 7.2E-16 101.2 10.9 98 97-213 1-111 (211)
111 COG3545 Predicted esterase of 99.2 6.1E-10 1.3E-14 85.9 15.2 170 95-385 3-177 (181)
112 PTZ00472 serine carboxypeptida 99.2 7.5E-10 1.6E-14 102.9 18.5 144 68-213 47-217 (462)
113 PRK05371 x-prolyl-dipeptidyl a 99.2 2.4E-10 5.2E-15 112.3 15.5 84 130-213 272-374 (767)
114 COG0657 Aes Esterase/lipase [L 99.2 1.5E-09 3.3E-14 96.8 19.0 116 77-213 60-192 (312)
115 PF10503 Esterase_phd: Esteras 99.2 7.3E-10 1.6E-14 91.7 14.2 117 82-211 2-131 (220)
116 KOG4627 Kynurenine formamidase 99.2 3.6E-10 7.7E-15 88.9 10.3 205 76-384 51-268 (270)
117 PF12740 Chlorophyllase2: Chlo 99.2 1.9E-09 4.1E-14 90.4 15.3 101 94-211 17-130 (259)
118 KOG2100 Dipeptidyl aminopeptid 99.1 3.1E-09 6.6E-14 104.3 18.6 223 71-385 501-745 (755)
119 KOG1515 Arylacetamide deacetyl 99.1 1.8E-08 3.8E-13 88.7 21.3 125 71-213 64-208 (336)
120 PF09752 DUF2048: Uncharacteri 99.1 4.8E-09 1E-13 91.0 16.9 240 92-385 90-347 (348)
121 PF06028 DUF915: Alpha/beta hy 99.1 1.1E-09 2.3E-14 92.9 12.7 104 94-213 11-144 (255)
122 PRK10252 entF enterobactin syn 99.1 8.2E-10 1.8E-14 117.5 13.7 100 94-211 1068-1170(1296)
123 KOG3043 Predicted hydrolase re 99.1 1.7E-09 3.6E-14 86.7 10.9 165 82-371 29-212 (242)
124 KOG2281 Dipeptidyl aminopeptid 99.1 1.1E-08 2.3E-13 93.8 16.7 135 69-213 614-763 (867)
125 PF03959 FSH1: Serine hydrolas 99.0 1.8E-09 3.8E-14 90.3 9.1 46 326-372 159-205 (212)
126 PF05677 DUF818: Chlamydia CHL 99.0 9.2E-08 2E-12 82.2 19.1 112 72-198 116-236 (365)
127 PF11339 DUF3141: Protein of u 99.0 5.5E-09 1.2E-13 94.0 12.3 82 130-216 94-179 (581)
128 PF08840 BAAT_C: BAAT / Acyl-C 99.0 1.6E-09 3.6E-14 90.3 8.0 50 162-212 5-56 (213)
129 PF07819 PGAP1: PGAP1-like pro 99.0 4.2E-09 9.1E-14 88.4 10.3 103 93-212 3-123 (225)
130 COG4099 Predicted peptidase [G 99.0 1.7E-08 3.6E-13 84.3 12.9 128 76-211 169-303 (387)
131 PF03403 PAF-AH_p_II: Platelet 98.9 1.6E-08 3.4E-13 91.6 11.6 100 94-211 100-261 (379)
132 PF06057 VirJ: Bacterial virul 98.9 1.1E-08 2.5E-13 80.9 8.7 97 95-212 3-107 (192)
133 COG4188 Predicted dienelactone 98.9 2.3E-08 4.9E-13 87.2 10.7 91 93-200 70-182 (365)
134 PRK04940 hypothetical protein; 98.8 6.4E-08 1.4E-12 76.6 12.1 53 158-213 38-93 (180)
135 PF07224 Chlorophyllase: Chlor 98.8 2.5E-08 5.4E-13 82.0 9.5 99 94-212 46-157 (307)
136 KOG2551 Phospholipase/carboxyh 98.8 1.5E-07 3.2E-12 75.8 13.4 56 327-384 162-217 (230)
137 KOG3975 Uncharacterized conser 98.8 5.8E-07 1.3E-11 73.3 16.5 106 92-212 27-147 (301)
138 PF03583 LIP: Secretory lipase 98.8 2.3E-07 4.9E-12 81.3 14.1 59 328-386 219-284 (290)
139 COG3319 Thioesterase domains o 98.8 4.8E-08 1.1E-12 82.6 9.1 100 95-212 1-103 (257)
140 COG3509 LpqC Poly(3-hydroxybut 98.7 3E-07 6.5E-12 77.4 13.2 127 72-212 39-179 (312)
141 PF00151 Lipase: Lipase; Inte 98.7 1.1E-08 2.4E-13 90.6 4.3 103 92-213 69-188 (331)
142 KOG2112 Lysophospholipase [Lip 98.7 1.4E-07 3E-12 75.4 9.4 102 94-211 3-127 (206)
143 PF00450 Peptidase_S10: Serine 98.7 1.9E-07 4.1E-12 87.0 11.3 145 68-213 11-182 (415)
144 PF12715 Abhydrolase_7: Abhydr 98.7 1.8E-07 3.8E-12 82.3 9.9 146 65-211 85-259 (390)
145 PF05990 DUF900: Alpha/beta hy 98.6 2E-07 4.3E-12 78.8 9.4 104 93-212 17-137 (233)
146 PF01674 Lipase_2: Lipase (cla 98.6 1E-07 2.3E-12 78.8 7.0 86 95-198 2-96 (219)
147 PLN02733 phosphatidylcholine-s 98.6 1.8E-07 3.9E-12 85.9 9.1 80 129-212 114-201 (440)
148 KOG1553 Predicted alpha/beta h 98.6 4.7E-07 1E-11 77.3 9.9 126 69-213 215-346 (517)
149 COG4814 Uncharacterized protei 98.6 3.1E-06 6.7E-11 69.5 13.8 102 95-212 46-176 (288)
150 smart00824 PKS_TE Thioesterase 98.6 7.2E-07 1.6E-11 74.6 10.8 74 137-211 25-101 (212)
151 COG2936 Predicted acyl esteras 98.5 2.1E-06 4.5E-11 79.8 14.2 135 69-213 20-160 (563)
152 COG3150 Predicted esterase [Ge 98.5 2.4E-06 5.2E-11 65.4 11.2 90 97-212 2-91 (191)
153 KOG1282 Serine carboxypeptidas 98.4 0.00015 3.3E-09 66.5 23.0 144 66-213 42-214 (454)
154 COG1075 LipA Predicted acetylt 98.4 9.6E-07 2.1E-11 79.0 7.8 100 94-211 59-163 (336)
155 PF12048 DUF3530: Protein of u 98.4 0.0002 4.3E-09 63.3 22.0 106 92-211 85-228 (310)
156 PLN02209 serine carboxypeptida 98.4 0.00014 3.1E-09 67.2 21.9 144 69-213 40-213 (437)
157 PLN03016 sinapoylglucose-malat 98.4 5.4E-05 1.2E-09 70.0 18.7 145 67-213 36-211 (433)
158 PRK10439 enterobactin/ferric e 98.3 3.7E-05 8.1E-10 70.7 16.9 51 161-211 268-322 (411)
159 KOG3847 Phospholipase A2 (plat 98.3 7.4E-06 1.6E-10 69.3 10.9 101 94-211 118-274 (399)
160 PF08386 Abhydrolase_4: TAP-li 98.3 5.8E-06 1.2E-10 60.2 9.1 60 327-386 33-93 (103)
161 PLN02606 palmitoyl-protein thi 98.3 9.5E-06 2.1E-10 69.5 11.0 98 95-212 27-132 (306)
162 KOG4840 Predicted hydrolases o 98.3 2.5E-05 5.4E-10 62.9 11.8 105 94-213 36-145 (299)
163 PF05577 Peptidase_S28: Serine 98.2 1.1E-05 2.3E-10 75.6 11.1 85 129-213 51-149 (434)
164 PF05705 DUF829: Eukaryotic pr 98.2 7.5E-05 1.6E-09 63.9 14.0 57 328-384 178-240 (240)
165 KOG3253 Predicted alpha/beta h 98.2 1.3E-05 2.7E-10 73.8 9.4 45 327-371 303-348 (784)
166 PLN02633 palmitoyl protein thi 98.1 4.7E-05 1E-09 65.4 12.2 100 95-212 26-131 (314)
167 COG1505 Serine proteases of th 98.1 5.5E-05 1.2E-09 70.0 12.9 134 65-213 391-536 (648)
168 PF04301 DUF452: Protein of un 98.1 0.00019 4.1E-09 58.9 14.3 79 94-212 11-90 (213)
169 PF05057 DUF676: Putative seri 98.1 1E-05 2.2E-10 67.9 6.9 89 93-196 3-97 (217)
170 PF00756 Esterase: Putative es 98.1 6E-06 1.3E-10 71.3 5.6 52 162-213 98-151 (251)
171 KOG3101 Esterase D [General fu 98.1 6.3E-05 1.4E-09 60.1 10.4 106 94-213 44-177 (283)
172 KOG2183 Prolylcarboxypeptidase 98.0 0.00014 3.1E-09 64.2 13.5 109 94-214 80-204 (492)
173 KOG1551 Uncharacterized conser 98.0 0.00016 3.5E-09 59.9 13.0 54 331-385 309-364 (371)
174 PF10340 DUF2424: Protein of u 98.0 0.00058 1.2E-08 60.9 16.9 110 93-214 121-237 (374)
175 KOG3724 Negative regulator of 98.0 0.00011 2.3E-09 70.0 12.5 102 93-211 88-219 (973)
176 COG4782 Uncharacterized protei 97.9 3.6E-05 7.8E-10 67.0 7.8 105 93-213 115-235 (377)
177 cd00312 Esterase_lipase Estera 97.9 0.0001 2.2E-09 70.5 10.9 108 92-213 93-214 (493)
178 COG1073 Hydrolases of the alph 97.8 1.2E-05 2.6E-10 71.1 2.6 58 329-386 233-296 (299)
179 COG0627 Predicted esterase [Ge 97.7 0.00029 6.3E-09 62.0 9.2 108 93-213 53-188 (316)
180 PF02450 LCAT: Lecithin:choles 97.6 0.00043 9.3E-09 63.5 9.8 75 129-212 71-160 (389)
181 COG2382 Fes Enterochelin ester 97.5 0.0014 3E-08 56.1 11.1 36 177-212 177-212 (299)
182 PF02089 Palm_thioest: Palmito 97.5 0.00013 2.8E-09 62.2 4.5 101 94-211 5-115 (279)
183 COG2272 PnbA Carboxylesterase 97.4 0.00097 2.1E-08 60.9 9.3 115 81-212 80-217 (491)
184 PF00135 COesterase: Carboxyle 97.4 0.00093 2E-08 64.6 9.8 103 93-212 124-245 (535)
185 KOG2182 Hydrolytic enzymes of 97.4 0.0017 3.7E-08 59.2 10.2 110 93-213 85-208 (514)
186 COG1770 PtrB Protease II [Amin 97.4 0.018 3.9E-07 54.6 17.0 130 70-213 421-563 (682)
187 PLN02213 sinapoylglucose-malat 97.4 0.0098 2.1E-07 53.1 15.0 60 328-387 233-317 (319)
188 PF10142 PhoPQ_related: PhoPQ- 97.4 0.0014 3E-08 58.8 9.3 56 327-384 261-317 (367)
189 PF11144 DUF2920: Protein of u 97.3 0.0036 7.7E-08 56.2 11.2 36 177-212 184-219 (403)
190 KOG2237 Predicted serine prote 97.3 0.0039 8.4E-08 58.5 11.5 131 68-213 441-585 (712)
191 KOG2541 Palmitoyl protein thio 97.2 0.0027 5.8E-08 53.1 8.9 98 95-211 24-127 (296)
192 PF04083 Abhydro_lipase: Parti 97.2 0.00065 1.4E-08 43.9 4.3 47 65-111 9-60 (63)
193 PF06259 Abhydrolase_8: Alpha/ 97.2 0.01 2.2E-07 47.5 11.8 122 82-211 8-143 (177)
194 COG4553 DepA Poly-beta-hydroxy 97.2 0.011 2.5E-07 50.0 12.1 114 82-213 91-210 (415)
195 KOG3967 Uncharacterized conser 96.9 0.011 2.4E-07 47.7 9.5 113 93-211 100-226 (297)
196 cd00741 Lipase Lipase. Lipase 96.8 0.0026 5.7E-08 50.1 5.6 51 161-211 9-66 (153)
197 PF01764 Lipase_3: Lipase (cla 96.6 0.0042 9.1E-08 48.1 5.1 37 161-198 49-85 (140)
198 COG2939 Carboxypeptidase C (ca 96.4 0.015 3.4E-07 53.4 8.2 121 92-213 99-237 (498)
199 COG4947 Uncharacterized protei 96.2 0.029 6.3E-07 43.7 7.6 116 78-213 14-137 (227)
200 PF11187 DUF2974: Protein of u 96.1 0.013 2.8E-07 49.2 5.7 45 165-211 74-122 (224)
201 COG3946 VirJ Type IV secretory 96.1 0.029 6.3E-07 50.0 8.0 65 130-199 280-348 (456)
202 PF11288 DUF3089: Protein of u 96.1 0.012 2.6E-07 48.1 5.1 41 158-198 76-116 (207)
203 PF01083 Cutinase: Cutinase; 96.0 0.032 7E-07 45.1 7.2 103 94-211 5-121 (179)
204 PF05576 Peptidase_S37: PS-10 96.0 0.015 3.2E-07 52.2 5.4 103 93-213 62-170 (448)
205 COG2819 Predicted hydrolase of 96.0 0.014 3.1E-07 49.3 5.1 36 177-212 137-172 (264)
206 PLN02517 phosphatidylcholine-s 95.7 0.015 3.3E-07 54.8 4.8 53 160-212 193-263 (642)
207 cd00519 Lipase_3 Lipase (class 95.5 0.019 4.2E-07 48.6 4.5 35 177-211 128-167 (229)
208 KOG1202 Animal-type fatty acid 95.5 0.39 8.4E-06 49.1 13.4 95 92-212 2121-2219(2376)
209 PF07082 DUF1350: Protein of u 95.1 0.17 3.7E-06 42.5 8.6 73 129-210 40-123 (250)
210 KOG1516 Carboxylesterase and r 94.9 0.12 2.5E-06 50.2 8.5 106 94-213 112-233 (545)
211 KOG2369 Lecithin:cholesterol a 94.9 0.033 7.1E-07 50.8 4.0 49 162-211 168-224 (473)
212 PLN02162 triacylglycerol lipas 94.8 0.068 1.5E-06 49.1 6.0 34 162-196 264-297 (475)
213 COG2830 Uncharacterized protei 94.8 0.58 1.3E-05 36.2 9.8 78 94-211 11-89 (214)
214 PLN00413 triacylglycerol lipas 94.8 0.075 1.6E-06 49.0 6.1 35 161-196 269-303 (479)
215 KOG2521 Uncharacterized conser 94.7 0.79 1.7E-05 41.0 12.1 56 331-386 228-289 (350)
216 PF06441 EHN: Epoxide hydrolas 94.7 0.038 8.1E-07 40.6 3.3 38 73-111 72-109 (112)
217 PLN02571 triacylglycerol lipas 94.6 0.048 1E-06 49.6 4.4 38 160-197 208-246 (413)
218 PLN02454 triacylglycerol lipas 94.4 0.059 1.3E-06 49.0 4.5 20 178-197 229-248 (414)
219 KOG4388 Hormone-sensitive lipa 94.0 0.19 4.2E-06 47.0 7.0 117 82-212 384-508 (880)
220 PF06850 PHB_depo_C: PHB de-po 93.9 0.093 2E-06 42.1 4.1 58 329-386 135-201 (202)
221 KOG4372 Predicted alpha/beta h 93.8 0.067 1.5E-06 47.9 3.6 87 93-195 79-168 (405)
222 PLN02310 triacylglycerol lipas 93.7 0.092 2E-06 47.7 4.4 37 161-197 190-229 (405)
223 PLN02408 phospholipase A1 93.7 0.099 2.1E-06 46.9 4.5 35 163-197 185-220 (365)
224 PF07519 Tannase: Tannase and 93.2 1.3 2.8E-05 41.9 11.4 78 135-214 57-152 (474)
225 PLN02934 triacylglycerol lipas 93.2 0.13 2.9E-06 47.8 4.6 35 161-196 306-340 (515)
226 PF05277 DUF726: Protein of un 92.9 0.28 6.1E-06 43.8 6.1 36 177-212 220-260 (345)
227 PLN03037 lipase class 3 family 92.8 0.15 3.3E-06 47.6 4.3 37 161-197 299-338 (525)
228 KOG1283 Serine carboxypeptidas 92.7 1.3 2.9E-05 38.6 9.5 137 72-212 7-166 (414)
229 PLN02324 triacylglycerol lipas 92.7 0.16 3.5E-06 46.2 4.3 36 162-197 199-235 (415)
230 PLN02802 triacylglycerol lipas 92.5 0.18 3.9E-06 46.9 4.5 36 162-197 314-350 (509)
231 PLN02753 triacylglycerol lipas 92.3 0.19 4.2E-06 47.0 4.4 36 162-197 293-332 (531)
232 COG4287 PqaA PhoPQ-activated p 92.2 0.24 5.1E-06 43.8 4.5 47 326-372 327-374 (507)
233 TIGR03712 acc_sec_asp2 accesso 92.1 10 0.00022 35.4 17.5 119 73-213 270-391 (511)
234 PLN02761 lipase class 3 family 91.9 0.23 5E-06 46.4 4.4 36 162-197 274-314 (527)
235 PLN02719 triacylglycerol lipas 91.1 0.3 6.4E-06 45.6 4.3 36 162-197 279-318 (518)
236 PF08237 PE-PPE: PE-PPE domain 89.8 1.3 2.8E-05 37.3 6.7 61 137-197 2-68 (225)
237 PLN02847 triacylglycerol lipas 89.6 0.55 1.2E-05 44.7 4.7 21 177-197 251-271 (633)
238 KOG4569 Predicted lipase [Lipi 88.6 0.61 1.3E-05 42.0 4.2 37 160-197 155-191 (336)
239 PF07519 Tannase: Tannase and 86.4 1.5 3.2E-05 41.6 5.6 61 327-387 352-427 (474)
240 KOG2029 Uncharacterized conser 84.7 1.7 3.6E-05 41.3 4.8 53 159-211 506-571 (697)
241 KOG4540 Putative lipase essent 83.6 2.5 5.3E-05 36.3 5.0 45 165-211 264-308 (425)
242 COG5153 CVT17 Putative lipase 83.6 2.5 5.3E-05 36.3 5.0 45 165-211 264-308 (425)
243 TIGR01626 ytfJ_HI0045 conserve 81.5 27 0.00058 28.3 10.6 98 71-195 38-142 (184)
244 PF09994 DUF2235: Uncharacteri 67.8 29 0.00062 30.4 7.6 40 158-197 72-112 (277)
245 PF09949 DUF2183: Uncharacteri 67.5 29 0.00062 24.9 6.2 78 129-207 16-97 (100)
246 KOG2385 Uncharacterized conser 66.7 10 0.00022 35.6 4.5 38 174-212 445-487 (633)
247 COG4822 CbiK Cobalamin biosynt 66.3 23 0.00049 29.2 5.9 66 89-182 133-199 (265)
248 KOG4389 Acetylcholinesterase/B 65.4 35 0.00077 32.1 7.7 124 81-216 121-259 (601)
249 PF10605 3HBOH: 3HB-oligomer h 56.9 8.1 0.00017 37.1 2.2 37 178-214 286-323 (690)
250 PRK12467 peptide synthase; Pro 56.6 34 0.00075 42.1 7.8 98 94-209 3692-3792(3956)
251 smart00827 PKS_AT Acyl transfe 54.7 13 0.00029 32.7 3.3 30 167-197 73-102 (298)
252 PF00698 Acyl_transf_1: Acyl t 53.8 8.7 0.00019 34.3 2.0 31 166-197 74-104 (318)
253 COG0482 TrmU Predicted tRNA(5- 53.8 36 0.00077 30.8 5.6 51 129-182 19-69 (356)
254 cd01714 ETF_beta The electron 50.5 54 0.0012 27.1 6.0 65 136-208 75-145 (202)
255 TIGR03131 malonate_mdcH malona 50.5 17 0.00036 32.1 3.2 31 166-197 66-96 (295)
256 cd07225 Pat_PNPLA6_PNPLA7 Pata 49.0 22 0.00048 31.6 3.7 33 165-198 32-64 (306)
257 PRK10279 hypothetical protein; 47.8 18 0.00039 32.0 2.9 35 165-200 22-56 (300)
258 PRK13728 conjugal transfer pro 47.7 67 0.0015 26.0 5.9 58 69-149 54-111 (181)
259 COG1448 TyrB Aspartate/tyrosin 46.4 77 0.0017 28.9 6.5 90 94-211 171-264 (396)
260 cd07198 Patatin Patatin-like p 46.1 27 0.00058 27.9 3.5 33 166-199 16-48 (172)
261 cd07207 Pat_ExoU_VipD_like Exo 45.1 28 0.0006 28.4 3.5 32 166-198 17-48 (194)
262 cd07227 Pat_Fungal_NTE1 Fungal 44.8 28 0.00062 30.2 3.6 33 165-198 27-59 (269)
263 TIGR00128 fabD malonyl CoA-acy 44.7 22 0.00048 31.1 3.1 30 168-198 74-104 (290)
264 PRK02399 hypothetical protein; 44.2 2E+02 0.0044 26.7 8.9 78 129-207 22-127 (406)
265 COG1752 RssA Predicted esteras 44.2 26 0.00057 31.1 3.4 34 165-199 28-61 (306)
266 KOG0781 Signal recognition par 43.5 41 0.00089 31.6 4.4 72 130-209 459-539 (587)
267 cd07210 Pat_hypo_W_succinogene 43.5 33 0.00072 28.8 3.8 33 166-199 18-50 (221)
268 PLN02748 tRNA dimethylallyltra 41.8 1.4E+02 0.003 28.5 7.8 76 92-184 19-119 (468)
269 KOG2872 Uroporphyrinogen decar 41.4 80 0.0017 27.5 5.5 55 130-185 266-336 (359)
270 PF00004 AAA: ATPase family as 40.4 65 0.0014 23.8 4.8 53 98-173 1-53 (132)
271 PF11713 Peptidase_C80: Peptid 40.0 30 0.00064 27.3 2.8 47 143-189 59-116 (157)
272 PF06792 UPF0261: Uncharacteri 39.5 2.5E+02 0.0054 26.1 8.7 78 129-207 20-125 (403)
273 cd07228 Pat_NTE_like_bacteria 37.7 42 0.00092 26.8 3.5 32 167-199 19-50 (175)
274 PF05576 Peptidase_S37: PS-10 36.6 35 0.00077 31.4 3.0 52 331-384 354-411 (448)
275 cd07209 Pat_hypo_Ecoli_Z1214_l 35.6 46 0.00099 27.8 3.4 33 166-199 16-48 (215)
276 PRK06731 flhF flagellar biosyn 35.3 2.7E+02 0.0059 24.2 8.2 65 137-209 154-220 (270)
277 PF10081 Abhydrolase_9: Alpha/ 34.7 59 0.0013 28.3 3.9 36 177-212 109-147 (289)
278 PRK14974 cell division protein 34.1 1.6E+02 0.0035 26.6 6.8 67 135-209 220-288 (336)
279 COG1073 Hydrolases of the alph 33.7 2.9E+02 0.0063 23.6 8.5 88 93-199 48-154 (299)
280 PF06309 Torsin: Torsin; Inte 33.6 46 0.001 25.1 2.7 20 92-111 50-69 (127)
281 PF00448 SRP54: SRP54-type pro 33.5 1.8E+02 0.004 23.8 6.6 66 136-209 82-149 (196)
282 cd07230 Pat_TGL4-5_like Triacy 33.4 23 0.00049 33.1 1.3 39 165-204 90-128 (421)
283 TIGR02816 pfaB_fam PfaB family 33.3 40 0.00087 32.6 3.0 30 168-198 256-286 (538)
284 COG0218 Predicted GTPase [Gene 33.2 40 0.00086 27.7 2.5 31 140-171 72-102 (200)
285 cd08769 DAP_dppA_2 Peptidase M 32.6 86 0.0019 27.3 4.6 49 327-381 146-197 (270)
286 cd07205 Pat_PNPLA6_PNPLA7_NTE1 32.4 66 0.0014 25.6 3.8 32 166-198 18-49 (175)
287 COG3340 PepE Peptidase E [Amin 32.4 1.3E+02 0.0029 25.0 5.3 37 94-145 32-70 (224)
288 COG0529 CysC Adenylylsulfate k 32.2 2.5E+02 0.0054 22.8 6.6 61 94-169 22-84 (197)
289 KOG3551 Syntrophins (type beta 32.1 52 0.0011 29.8 3.2 42 65-106 448-497 (506)
290 COG3673 Uncharacterized conser 31.9 1E+02 0.0022 27.4 4.9 62 136-197 63-142 (423)
291 PF14253 AbiH: Bacteriophage a 31.3 50 0.0011 28.5 3.1 23 168-190 226-248 (270)
292 PF02230 Abhydrolase_2: Phosph 31.2 77 0.0017 26.3 4.1 60 94-172 155-214 (216)
293 COG3657 Uncharacterized protei 30.6 1E+02 0.0022 21.8 3.7 39 63-107 45-83 (100)
294 PF03610 EIIA-man: PTS system 30.3 2E+02 0.0044 21.0 5.8 51 139-197 28-78 (116)
295 PF13207 AAA_17: AAA domain; P 30.3 57 0.0012 23.8 2.9 60 97-173 1-64 (121)
296 cd07229 Pat_TGL3_like Triacylg 29.7 33 0.00071 31.6 1.7 40 166-206 101-140 (391)
297 cd07232 Pat_PLPL Patain-like p 29.7 29 0.00062 32.3 1.4 40 165-205 84-123 (407)
298 COG0541 Ffh Signal recognition 28.4 2.5E+02 0.0055 26.3 7.0 50 159-209 197-248 (451)
299 PF10686 DUF2493: Protein of u 28.4 76 0.0016 21.1 2.8 37 94-148 31-70 (71)
300 PRK05282 (alpha)-aspartyl dipe 28.0 1.4E+02 0.003 25.4 5.0 83 94-193 31-128 (233)
301 cd07231 Pat_SDP1-like Sugar-De 27.9 32 0.0007 30.6 1.3 37 165-202 85-121 (323)
302 PF03283 PAE: Pectinacetyleste 26.8 2.3E+02 0.005 25.9 6.6 36 176-211 155-194 (361)
303 cd07208 Pat_hypo_Ecoli_yjju_li 26.2 85 0.0019 27.1 3.7 34 166-200 16-50 (266)
304 KOG1252 Cystathionine beta-syn 26.0 2.8E+02 0.0061 25.0 6.5 119 72-209 187-336 (362)
305 cd00006 PTS_IIA_man PTS_IIA, P 25.6 2.6E+02 0.0057 20.6 5.8 49 139-195 28-76 (122)
306 PF03054 tRNA_Me_trans: tRNA m 25.5 56 0.0012 29.7 2.4 52 129-182 16-68 (356)
307 PF12694 MoCo_carrier: Putativ 25.3 3.1E+02 0.0068 21.2 5.9 63 93-186 64-126 (145)
308 PRK08118 topology modulation p 24.5 3.6E+02 0.0077 21.3 6.8 85 98-211 4-88 (167)
309 PF11191 DUF2782: Protein of u 24.1 2.8E+02 0.0061 20.0 5.6 17 72-88 42-59 (105)
310 TIGR01425 SRP54_euk signal rec 23.8 2.6E+02 0.0056 26.3 6.4 65 136-208 181-247 (429)
311 cd07224 Pat_like Patatin-like 23.4 1E+02 0.0022 26.1 3.5 35 165-199 16-51 (233)
312 COG3933 Transcriptional antite 23.2 2.7E+02 0.0058 26.2 6.1 75 94-195 109-183 (470)
313 PF12242 Eno-Rase_NADH_b: NAD( 23.0 1.3E+02 0.0028 20.4 3.1 24 174-198 38-61 (78)
314 cd07212 Pat_PNPLA9 Patatin-lik 22.9 1.4E+02 0.003 26.7 4.4 20 180-199 35-54 (312)
315 PRK00091 miaA tRNA delta(2)-is 22.6 2.9E+02 0.0063 24.6 6.3 72 94-182 3-99 (307)
316 PRK11901 hypothetical protein; 22.6 1.7E+02 0.0037 26.1 4.6 22 331-355 284-305 (327)
317 PF08484 Methyltransf_14: C-me 22.3 2E+02 0.0044 22.7 4.7 51 161-211 52-103 (160)
318 TIGR01663 PNK-3'Pase polynucle 21.3 2.1E+02 0.0046 27.7 5.5 37 93-146 367-403 (526)
319 cd07206 Pat_TGL3-4-5_SDP1 Tria 21.2 97 0.0021 27.4 3.0 36 166-202 87-122 (298)
320 PF00326 Peptidase_S9: Prolyl 21.1 1E+02 0.0022 25.4 3.0 16 93-108 143-158 (213)
321 KOG2805 tRNA (5-methylaminomet 21.1 3.7E+02 0.0079 24.0 6.2 47 129-175 21-68 (377)
322 COG2069 CdhD CO dehydrogenase/ 20.6 2.8E+02 0.006 24.4 5.3 52 130-186 157-208 (403)
323 cd03146 GAT1_Peptidase_E Type 20.5 3.1E+02 0.0067 22.7 5.8 82 94-193 31-129 (212)
324 COG2939 Carboxypeptidase C (ca 20.2 83 0.0018 29.9 2.4 55 331-386 428-490 (498)
325 PRK15367 type III secretion sy 20.1 4E+02 0.0088 24.6 6.6 56 98-182 166-221 (395)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.4e-33 Score=249.88 Aligned_cols=271 Identities=16% Similarity=0.163 Sum_probs=173.6
Q ss_pred cccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCC
Q 016533 68 VTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAG 147 (388)
Q Consensus 68 ~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G 147 (388)
.+..++.. +|.+++|...|++ +++|||+||+++++..|. .+ +..+.++ |+|+++|+||
T Consensus 8 ~~~~~~~~-~~~~i~y~~~G~~----~~~vlllHG~~~~~~~w~---~~------------~~~L~~~--~~vi~~DlpG 65 (294)
T PLN02824 8 VETRTWRW-KGYNIRYQRAGTS----GPALVLVHGFGGNADHWR---KN------------TPVLAKS--HRVYAIDLLG 65 (294)
T ss_pred CCCceEEE-cCeEEEEEEcCCC----CCeEEEECCCCCChhHHH---HH------------HHHHHhC--CeEEEEcCCC
Confidence 34556666 8999999998853 579999999999999999 87 6777654 7999999999
Q ss_pred cCCCCCCC--------CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCC-CC
Q 016533 148 YGESDPNP--------NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWW-PG 218 (388)
Q Consensus 148 ~G~S~~~~--------~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~-~~ 218 (388)
||.|+.+. .++++++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++...... ..
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~ 144 (294)
T PLN02824 66 YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVG-DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKK 144 (294)
T ss_pred CCCCCCCccccccccccCCHHHHHHHHHHHHHHhcC-CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccc
Confidence 99998542 47999999999999999999 7999999999999999999999999999999998642110 00
Q ss_pred CCchhhH---HHHhhcCCchhHHHHHHhh--cchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHH
Q 016533 219 FPANLSK---EAYYQQLPQDQWAVRVAHY--IPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALA 293 (388)
Q Consensus 219 ~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (388)
.+ .... ..+........+....... .+......+. ..+. ..........+.+........
T Consensus 145 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~------ 209 (294)
T PLN02824 145 QP-WLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILC-QCYH-------DDSAVTDELVEAILRPGLEPG------ 209 (294)
T ss_pred cc-hhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHH-Hhcc-------ChhhccHHHHHHHHhccCCch------
Confidence 00 0000 0011100000000000000 0000000000 0000 000011111111110000000
Q ss_pred HhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-
Q 016533 294 RQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT- 372 (388)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e- 372 (388)
.......... .. ........++++++|+|+|+|++|.++|.+.++.+.+..+++++++++++||+++.|
T Consensus 210 -----~~~~~~~~~~-~~----~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 279 (294)
T PLN02824 210 -----AVDVFLDFIS-YS----GGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEA 279 (294)
T ss_pred -----HHHHHHHHhc-cc----cccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhC
Confidence 0000001100 00 000111235678889999999999999999999998888889999999999999999
Q ss_pred CCchHHHHHHhhcC
Q 016533 373 DGMSDTIVKAVLTG 386 (388)
Q Consensus 373 ~~~~~~~i~~fl~~ 386 (388)
|+.+++.|.+|+++
T Consensus 280 p~~~~~~i~~fl~~ 293 (294)
T PLN02824 280 PELVNPLIESFVAR 293 (294)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999975
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2e-32 Score=240.23 Aligned_cols=257 Identities=17% Similarity=0.220 Sum_probs=167.1
Q ss_pred eEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCC
Q 016533 72 RIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGES 151 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 151 (388)
++.+ +|.+++|...+.. +.+++|||+||++++...|. .+ +..+.+ +|+|+++|+||||.|
T Consensus 6 ~~~~-~~~~~~~~~~~~~--~~~~plvllHG~~~~~~~w~---~~------------~~~L~~--~~~vi~~Dl~G~G~S 65 (276)
T TIGR02240 6 TIDL-DGQSIRTAVRPGK--EGLTPLLIFNGIGANLELVF---PF------------IEALDP--DLEVIAFDVPGVGGS 65 (276)
T ss_pred Eecc-CCcEEEEEEecCC--CCCCcEEEEeCCCcchHHHH---HH------------HHHhcc--CceEEEECCCCCCCC
Confidence 4444 8889999876322 23579999999999999998 77 566544 599999999999999
Q ss_pred CCCC-CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccC-CCCCCchhhHHHHh
Q 016533 152 DPNP-NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYW-WPGFPANLSKEAYY 229 (388)
Q Consensus 152 ~~~~-~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~-~~~~~~~~~~~~~~ 229 (388)
+.+. .++++++++|+.++++++++ ++++|+||||||.+++.+|.++|++|+++|++++..... .+..+ ....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-----~~~~ 139 (276)
T TIGR02240 66 STPRHPYRFPGLAKLAARMLDYLDY-GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKP-----KVLM 139 (276)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHhCc-CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCch-----hHHH
Confidence 8543 47899999999999999998 799999999999999999999999999999999875321 01000 0000
Q ss_pred hcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHH-HhhcCCCchHHHHHHHhhchhhHHHHHHHh
Q 016533 230 QQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEV-LSKWSPEENNYMALARQQGEYESLHRDMMV 308 (388)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (388)
........ .. ..... .....++... .. ........ ......... . ........
T Consensus 140 ~~~~~~~~---~~---~~~~~-~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~ 193 (276)
T TIGR02240 140 MMASPRRY---IQ---PSHGI-HIAPDIYGGA------FR-RDPELAMAHASKVRSGGK-----------L-GYYWQLFA 193 (276)
T ss_pred HhcCchhh---hc---ccccc-chhhhhccce------ee-ccchhhhhhhhhcccCCC-----------c-hHHHHHHH
Confidence 00000000 00 00000 0000000000 00 00000000 000000000 0 00000000
Q ss_pred hccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhcCC
Q 016533 309 GFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLTGD 387 (388)
Q Consensus 309 ~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 387 (388)
.. .+ .....+++++||+|+|+|++|.++|++..+.+.+.+++++++++++ ||+++.| |+++++.|.+|+++.
T Consensus 194 ~~-~~-----~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 194 GL-GW-----TSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred Hc-CC-----chhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence 00 00 1112356788889999999999999999999999999999999985 9999999 999999999999753
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=7.4e-32 Score=244.00 Aligned_cols=271 Identities=16% Similarity=0.141 Sum_probs=170.9
Q ss_pred CCccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCcc-ccccccCCCCCccccccCchHHHHHHhCeEEEEe
Q 016533 65 GPAVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHD-SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSY 143 (388)
Q Consensus 65 ~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 143 (388)
+...++.++...+|.+|+|..++++.++++++|||+||++++... |. .+ ...+.+ .||+|+++
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~---~~------------~~~l~~-~g~~v~~~ 121 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFE---GI------------ARKIAS-SGYGVFAM 121 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHH---HH------------HHHHHh-CCCEEEEe
Confidence 444555567778999999999987654567899999999988764 45 45 455544 49999999
Q ss_pred CCCCcCCCCCCCC--CChhhHHHHHHHHHHHhCC-----CCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCC
Q 016533 144 DRAGYGESDPNPN--RTVKSDALDIEELADQLGV-----GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWW 216 (388)
Q Consensus 144 D~~G~G~S~~~~~--~~~~~~~~dl~~~l~~l~~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~ 216 (388)
|+||||.|+.... .+++++++|+.++++.++. +.+++|+||||||.+++.++.++|++|+++|+++|......
T Consensus 122 D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~ 201 (349)
T PLN02385 122 DYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIAD 201 (349)
T ss_pred cCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccc
Confidence 9999999986544 3889999999999988753 13799999999999999999999999999999998753211
Q ss_pred CCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchH-HHHHHHh
Q 016533 217 PGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENN-YMALARQ 295 (388)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 295 (388)
...+..... ..........+... ......+.. ..+................. ......
T Consensus 202 ~~~~~~~~~----------~~~~~~~~~~p~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~- 260 (349)
T PLN02385 202 DVVPPPLVL----------QILILLANLLPKAK--LVPQKDLAE--------LAFRDLKKRKMAEYNVIAYKDKPRLRT- 260 (349)
T ss_pred cccCchHHH----------HHHHHHHHHCCCce--ecCCCcccc--------ccccCHHHHHHhhcCcceeCCCcchHH-
Confidence 100100000 00000111111000 000000000 00000000000000000000 000000
Q ss_pred hchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC--CCceEEEeCCCCCCcccC-
Q 016533 296 QGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL--PWIHYHELSGAGHMFPFT- 372 (388)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e- 372 (388)
.. .+..... ++...+.++++|+|+|+|++|.++|++.++.+++.+ +++++++++++||+++.|
T Consensus 261 --~~-~~l~~~~-----------~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~ 326 (349)
T PLN02385 261 --AV-ELLRTTQ-----------EIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGE 326 (349)
T ss_pred --HH-HHHHHHH-----------HHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCC
Confidence 00 0000000 112235567788999999999999999999999987 568999999999999988
Q ss_pred CCc----hHHHHHHhhcC
Q 016533 373 DGM----SDTIVKAVLTG 386 (388)
Q Consensus 373 ~~~----~~~~i~~fl~~ 386 (388)
|+. +.+.|.+||++
T Consensus 327 p~~~~~~v~~~i~~wL~~ 344 (349)
T PLN02385 327 PDEMIFQVLDDIISWLDS 344 (349)
T ss_pred ChhhHHHHHHHHHHHHHH
Confidence 876 77888899875
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.4e-32 Score=239.87 Aligned_cols=270 Identities=15% Similarity=0.165 Sum_probs=167.7
Q ss_pred ccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc
Q 016533 69 TAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY 148 (388)
Q Consensus 69 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~ 148 (388)
+..+++. +|.+++|...|. +++|||+||++++...|. .+ ++.+.++ |+|+++|+|||
T Consensus 8 ~~~~~~~-~g~~i~y~~~G~-----g~~vvllHG~~~~~~~w~---~~------------~~~L~~~--~~via~D~~G~ 64 (295)
T PRK03592 8 EMRRVEV-LGSRMAYIETGE-----GDPIVFLHGNPTSSYLWR---NI------------IPHLAGL--GRCLAPDLIGM 64 (295)
T ss_pred cceEEEE-CCEEEEEEEeCC-----CCEEEEECCCCCCHHHHH---HH------------HHHHhhC--CEEEEEcCCCC
Confidence 3345555 899999999984 579999999999999999 77 6777654 59999999999
Q ss_pred CCCCCCC-CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccC-CCCCCchhhHH
Q 016533 149 GESDPNP-NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYW-WPGFPANLSKE 226 (388)
Q Consensus 149 G~S~~~~-~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~-~~~~~~~~~~~ 226 (388)
|.|+.+. .++.+++++|+.+++++++. ++++++||||||.+++.++.++|++|+++|++++..... +...... ...
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~-~~~ 142 (295)
T PRK03592 65 GASDKPDIDYTFADHARYLDAWFDALGL-DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPA-VRE 142 (295)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchh-HHH
Confidence 9998654 57999999999999999999 799999999999999999999999999999999843210 0000000 000
Q ss_pred HHhhcCCchhHHHHHHhhcchhhh--hhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHH--
Q 016533 227 AYYQQLPQDQWAVRVAHYIPWLTY--WWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESL-- 302 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 302 (388)
.+.. ..... ....... .......+. ......+++++.+.+.............. ......
T Consensus 143 ~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 206 (295)
T PRK03592 143 LFQA-LRSPG-------EGEEMVLEENVFIERVLP-----GSILRPLSDEEMAVYRRPFPTPESRRPTL---SWPRELPI 206 (295)
T ss_pred HHHH-HhCcc-------cccccccchhhHHhhccc-----CcccccCCHHHHHHHHhhcCCchhhhhhh---hhhhhcCC
Confidence 0000 00000 0000000 000000000 00001112222211111111100000000 000000
Q ss_pred ---HHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcH-HHHHHHHHhCCCceEEEeCCCCCCcccC-CCchH
Q 016533 303 ---HRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPV-ILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSD 377 (388)
Q Consensus 303 ---~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~ 377 (388)
........ .+....+.+++||+|+|+|++|.++++ +..+.+.+..+++++++++++||+++.| |++++
T Consensus 207 ~~~~~~~~~~~-------~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~ 279 (295)
T PRK03592 207 DGEPADVVALV-------EEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIG 279 (295)
T ss_pred CCcchhhHhhh-------hHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHH
Confidence 00000000 011123456788899999999999944 4455555667899999999999999999 99999
Q ss_pred HHHHHhhcC
Q 016533 378 TIVKAVLTG 386 (388)
Q Consensus 378 ~~i~~fl~~ 386 (388)
+.|.+|+++
T Consensus 280 ~~i~~fl~~ 288 (295)
T PRK03592 280 AAIAAWLRR 288 (295)
T ss_pred HHHHHHHHH
Confidence 999999975
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.2e-31 Score=238.20 Aligned_cols=269 Identities=13% Similarity=0.056 Sum_probs=169.9
Q ss_pred CCccccCeEEcCCC-----cEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeE
Q 016533 65 GPAVTAPRIKLRDG-----RHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVY 139 (388)
Q Consensus 65 ~~~~~~~~~~~~~g-----~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 139 (388)
+.++...++.+ ++ .+|+|...|+++ +++|||+||++++...|. .+ +..|.++ ||+
T Consensus 16 ~~~~~~~~~~~-~~~~~~~~~i~y~~~G~~~---~~~lvliHG~~~~~~~w~---~~------------~~~L~~~-gy~ 75 (302)
T PRK00870 16 DYPFAPHYVDV-DDGDGGPLRMHYVDEGPAD---GPPVLLLHGEPSWSYLYR---KM------------IPILAAA-GHR 75 (302)
T ss_pred CCCCCceeEee-cCCCCceEEEEEEecCCCC---CCEEEEECCCCCchhhHH---HH------------HHHHHhC-CCE
Confidence 34555667776 44 689999988642 679999999999999999 87 6666544 899
Q ss_pred EEEeCCCCcCCCCCCC---CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCC
Q 016533 140 IVSYDRAGYGESDPNP---NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWW 216 (388)
Q Consensus 140 vi~~D~~G~G~S~~~~---~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~ 216 (388)
|+++|+||||.|+.+. .++++++++|+.+++++++. ++++++||||||.+++.+|..+|++|+++|++++......
T Consensus 76 vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 154 (302)
T PRK00870 76 VIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDL-TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGD 154 (302)
T ss_pred EEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC-CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcc
Confidence 9999999999997543 47899999999999999998 7999999999999999999999999999999997532100
Q ss_pred CCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHH-HHH-
Q 016533 217 PGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMA-LAR- 294 (388)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 294 (388)
. ........+......... ..... ...... ...+.......+............ ...
T Consensus 155 ~--~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (302)
T PRK00870 155 G--PMPDAFWAWRAFSQYSPV-LPVGR--------LVNGGT----------VRDLSDAVRAAYDAPFPDESYKAGARAFP 213 (302)
T ss_pred c--cchHHHhhhhcccccCch-hhHHH--------Hhhccc----------cccCCHHHHHHhhcccCChhhhcchhhhh
Confidence 0 000000001000000000 00000 000000 000010001111000000000000 000
Q ss_pred h---hchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCce---EEEeCCCCCC
Q 016533 295 Q---QGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIH---YHELSGAGHM 368 (388)
Q Consensus 295 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~---~~~i~~~gH~ 368 (388)
. ............ .....+.++++|+++|+|++|.++|.+. +.+.+.+++++ +++++++||+
T Consensus 214 ~~~~~~~~~~~~~~~~-----------~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~ 281 (302)
T PRK00870 214 LLVPTSPDDPAVAANR-----------AAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHF 281 (302)
T ss_pred hcCCCCCCCcchHHHH-----------HHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCcc
Confidence 0 000000000000 0001245678889999999999999876 88999898876 8899999999
Q ss_pred cccC-CCchHHHHHHhhcCC
Q 016533 369 FPFT-DGMSDTIVKAVLTGD 387 (388)
Q Consensus 369 ~~~e-~~~~~~~i~~fl~~~ 387 (388)
++.| |+.+++.|.+|+++.
T Consensus 282 ~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 282 LQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred chhhChHHHHHHHHHHHhcC
Confidence 9999 999999999999764
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.1e-31 Score=232.31 Aligned_cols=269 Identities=14% Similarity=0.123 Sum_probs=168.0
Q ss_pred CccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC
Q 016533 66 PAVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR 145 (388)
Q Consensus 66 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 145 (388)
.+++..++++ +|.+++|...|. +++|||+||++.+...|. .+ +..+.+ +|+|+++|+
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~G~-----~~~iv~lHG~~~~~~~~~---~~------------~~~l~~--~~~vi~~D~ 68 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDEGT-----GPPILLCHGNPTWSFLYR---DI------------IVALRD--RFRCVAPDY 68 (286)
T ss_pred ccccceEEEc-CCcEEEEEECCC-----CCEEEEECCCCccHHHHH---HH------------HHHHhC--CcEEEEECC
Confidence 4466667777 778999998874 578999999998888888 77 555543 599999999
Q ss_pred CCcCCCCCCC--CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchh
Q 016533 146 AGYGESDPNP--NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANL 223 (388)
Q Consensus 146 ~G~G~S~~~~--~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~ 223 (388)
||||.|+.+. .++.+++++++.+++++++. ++++++||||||.+++.++..+|++|+++|++++... + +...
T Consensus 69 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~---~--~~~~ 142 (286)
T PRK03204 69 LGFGLSERPSGFGYQIDEHARVIGEFVDHLGL-DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFW---P--ADTL 142 (286)
T ss_pred CCCCCCCCCCccccCHHHHHHHHHHHHHHhCC-CCEEEEEECccHHHHHHHHHhChhheeEEEEECcccc---C--CCch
Confidence 9999998654 47889999999999999998 7999999999999999999999999999999887531 0 0010
Q ss_pred hHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHH
Q 016533 224 SKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLH 303 (388)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (388)
....+............... ... ....++.. ......+......+........................
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (286)
T PRK03204 143 AMKAFSRVMSSPPVQYAILR--RNF----FVERLIPA-----GTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAAR 211 (286)
T ss_pred hHHHHHHHhccccchhhhhh--hhH----HHHHhccc-----cccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhh
Confidence 01111100000000000000 000 00000000 00011111111222111111111000000000000000
Q ss_pred HHHHhhccCcCCCCCCCCCCCC--CCCccEEEEecCCCCCCcHH-HHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHH
Q 016533 304 RDMMVGFGTWEFDPLDLKNPFP--NNEGSVHLWHGDEDRLVPVI-LQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTI 379 (388)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~p~~--~i~~Pvlii~G~~D~~~p~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~ 379 (388)
.... ++...+. .+++|+++|+|++|.++++. ..+.+.+.+|++++++++++||+++.| |+++++.
T Consensus 212 ~~~~-----------~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~ 280 (286)
T PRK03204 212 PLLA-----------RLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAA 280 (286)
T ss_pred HHHH-----------HhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHH
Confidence 0000 1100011 12677999999999998654 578899999999999999999999999 9999999
Q ss_pred HHHhhc
Q 016533 380 VKAVLT 385 (388)
Q Consensus 380 i~~fl~ 385 (388)
|.+||.
T Consensus 281 i~~~~~ 286 (286)
T PRK03204 281 IIERFG 286 (286)
T ss_pred HHHhcC
Confidence 999984
No 7
>PLN02578 hydrolase
Probab=99.98 E-value=4e-31 Score=239.22 Aligned_cols=277 Identities=16% Similarity=0.124 Sum_probs=168.0
Q ss_pred eEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCC
Q 016533 72 RIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGES 151 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 151 (388)
++.. +|.+++|...|+ +++|||+||++++...|. .+ ++.+.+ +|+|+++|+||||.|
T Consensus 70 ~~~~-~~~~i~Y~~~g~-----g~~vvliHG~~~~~~~w~---~~------------~~~l~~--~~~v~~~D~~G~G~S 126 (354)
T PLN02578 70 FWTW-RGHKIHYVVQGE-----GLPIVLIHGFGASAFHWR---YN------------IPELAK--KYKVYALDLLGFGWS 126 (354)
T ss_pred EEEE-CCEEEEEEEcCC-----CCeEEEECCCCCCHHHHH---HH------------HHHHhc--CCEEEEECCCCCCCC
Confidence 3443 688999998874 578999999999999998 77 566654 599999999999999
Q ss_pred CCCC-CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhh----HH
Q 016533 152 DPNP-NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLS----KE 226 (388)
Q Consensus 152 ~~~~-~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~----~~ 226 (388)
+.+. .++.+++++++.++++.+.. ++++++|||+||.+++.+|.++|++|+++|++++...+.......... ..
T Consensus 127 ~~~~~~~~~~~~a~~l~~~i~~~~~-~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
T PLN02578 127 DKALIEYDAMVWRDQVADFVKEVVK-EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEET 205 (354)
T ss_pred CCcccccCHHHHHHHHHHHHHHhcc-CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccc
Confidence 8654 57899999999999999987 799999999999999999999999999999999764321111000000 00
Q ss_pred HHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhh--hccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHH
Q 016533 227 AYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVI--AHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHR 304 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (388)
.+..... .............+..+............. ........+...+......... .....+..
T Consensus 206 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 274 (354)
T PLN02578 206 VLTRFVV-KPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADP----------NAGEVYYR 274 (354)
T ss_pred hhhHHHh-HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCC----------chHHHHHH
Confidence 0000000 000000000000000000000000000000 0000000000001100000000 00000000
Q ss_pred HHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHh
Q 016533 305 DMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAV 383 (388)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~f 383 (388)
.+...... .........++++++|+++|+|++|.++|.+.++.+.+.+++++++++ ++||+++.| |+++++.|.+|
T Consensus 275 ~~~~~~~~--~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~f 351 (354)
T PLN02578 275 LMSRFLFN--QSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEW 351 (354)
T ss_pred HHHHHhcC--CCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHH
Confidence 00000000 000122234567889999999999999999999999999999999999 589999999 99999999999
Q ss_pred hcC
Q 016533 384 LTG 386 (388)
Q Consensus 384 l~~ 386 (388)
+++
T Consensus 352 l~~ 354 (354)
T PLN02578 352 LSS 354 (354)
T ss_pred HhC
Confidence 963
No 8
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.98 E-value=4.7e-31 Score=222.31 Aligned_cols=281 Identities=19% Similarity=0.229 Sum_probs=177.3
Q ss_pred cccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCC
Q 016533 68 VTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAG 147 (388)
Q Consensus 68 ~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G 147 (388)
.+..+++. +|.+++|.+.|++ .+|.|+++||++.++.+|+ .+ +..+..+ ||+|+++|+||
T Consensus 22 ~~hk~~~~-~gI~~h~~e~g~~---~gP~illlHGfPe~wyswr---~q------------~~~la~~-~~rviA~DlrG 81 (322)
T KOG4178|consen 22 ISHKFVTY-KGIRLHYVEGGPG---DGPIVLLLHGFPESWYSWR---HQ------------IPGLASR-GYRVIAPDLRG 81 (322)
T ss_pred cceeeEEE-ccEEEEEEeecCC---CCCEEEEEccCCccchhhh---hh------------hhhhhhc-ceEEEecCCCC
Confidence 44555555 7899999999874 4899999999999999999 88 5676665 89999999999
Q ss_pred cCCCCCCC---CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCc-hh
Q 016533 148 YGESDPNP---NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPA-NL 223 (388)
Q Consensus 148 ~G~S~~~~---~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~-~~ 223 (388)
+|.|+.+. .|++..++.|+..++++++. ++++++||+||+.+|+.+|..+|++|+++|+++..... |.... ..
T Consensus 82 yG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~-~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~--p~~~~~~~ 158 (322)
T KOG4178|consen 82 YGFSDAPPHISEYTIDELVGDIVALLDHLGL-KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPN--PKLKPLDS 158 (322)
T ss_pred CCCCCCCCCcceeeHHHHHHHHHHHHHHhcc-ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCC--cccchhhh
Confidence 99999765 47999999999999999998 89999999999999999999999999999999965430 00000 00
Q ss_pred hHHHHh----hcCCchhHHHH--HHh-hcchhhhhhcccccc----cchhhhhccccccChhhHHHHhhcCCCchHHHHH
Q 016533 224 SKEAYY----QQLPQDQWAVR--VAH-YIPWLTYWWNTQKWF----LPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMAL 292 (388)
Q Consensus 224 ~~~~~~----~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (388)
....+. ....+...... +.. ..+.+.......... ... .....+..++.++.+........
T Consensus 159 ~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~w~t~edi~~~~~~f~~------- 230 (322)
T KOG4178|consen 159 SKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPK-QPNENPLWLTEEDIAFYVSKFQI------- 230 (322)
T ss_pred hccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCC-CCCCccchhhHHHHHHHHhcccc-------
Confidence 000000 00000000000 000 000000000000000 000 00000112333333333322111
Q ss_pred HHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHH-HHHHHHHhCCCc-eEEEeCCCCCCcc
Q 016533 293 ARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVI-LQRYIVQRLPWI-HYHELSGAGHMFP 370 (388)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~-~~~~~~~~~~~~-~~~~i~~~gH~~~ 370 (388)
..+.............|. .....+.++++|+++|+|+.|.+.+.. ..+.+.+.+++. +.++++|+||+++
T Consensus 231 ----~g~~gplNyyrn~~r~w~----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vq 302 (322)
T KOG4178|consen 231 ----DGFTGPLNYYRNFRRNWE----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQ 302 (322)
T ss_pred ----ccccccchhhHHHhhCch----hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCccccc
Confidence 111111111111122221 122234567777999999999998876 455666667776 6888999999999
Q ss_pred cC-CCchHHHHHHhhcCC
Q 016533 371 FT-DGMSDTIVKAVLTGD 387 (388)
Q Consensus 371 ~e-~~~~~~~i~~fl~~~ 387 (388)
.| |+++++.|.+|+++.
T Consensus 303 qe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 303 QEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccCHHHHHHHHHHHHHhh
Confidence 99 999999999999763
No 9
>PRK06489 hypothetical protein; Provisional
Probab=99.98 E-value=2.9e-31 Score=240.90 Aligned_cols=291 Identities=13% Similarity=0.107 Sum_probs=168.3
Q ss_pred cCCCCCCCCCCCCCCccccCeEEcCCCcEEEEEEcCCCCCC----CCceEEEEccCCCCCccccccccCCCCCccccccC
Q 016533 52 IQPPPPKTCGSPGGPAVTAPRIKLRDGRHLAYKEHGVPKDN----AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGG 127 (388)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~y~~~g~~~~~----~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (388)
..|.|+.....-.+..++... ..+|.+++|...|++..+ .+|+|||+||++++...|. .+.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~--~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~-~~~~----------- 90 (360)
T PRK06489 25 AYPAPQEGDWVARDFTFHSGE--TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFL-SPTF----------- 90 (360)
T ss_pred CCCCCccCceeccceeccCCC--CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhc-cchh-----------
Confidence 445555544333344444432 237899999999864211 1679999999999987774 0012
Q ss_pred chHHH-------HHHhCeEEEEeCCCCcCCCCCCC--------CCChhhHHHHHHHHH-HHhCCCCcEE-EEEecccHHH
Q 016533 128 IYQEV-------IEDLGVYIVSYDRAGYGESDPNP--------NRTVKSDALDIEELA-DQLGVGSKFY-VIGYSMGGHP 190 (388)
Q Consensus 128 ~~~~l-------~~~~g~~vi~~D~~G~G~S~~~~--------~~~~~~~~~dl~~~l-~~l~~~~~~~-lvGhS~Gg~i 190 (388)
...+ ..+ +|+||++|+||||.|+.+. .++++++++++.+++ +++++ ++++ ++||||||.+
T Consensus 91 -~~~l~~~~~~l~~~-~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi-~~~~~lvG~SmGG~v 167 (360)
T PRK06489 91 -AGELFGPGQPLDAS-KYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGV-KHLRLILGTSMGGMH 167 (360)
T ss_pred -HHHhcCCCCccccc-CCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCC-CceeEEEEECHHHHH
Confidence 1222 123 6999999999999997543 368899999988854 88999 6875 8999999999
Q ss_pred HHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchh-----------hhhhc-ccccc
Q 016533 191 IWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWL-----------TYWWN-TQKWF 258 (388)
Q Consensus 191 a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~ 258 (388)
++.+|.++|++|+++|++++.... .... ...... ............ ..... ...++
T Consensus 168 Al~~A~~~P~~V~~LVLi~s~~~~----~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T PRK06489 168 AWMWGEKYPDFMDALMPMASQPTE----MSGR--NWMWRR------MLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIA 235 (360)
T ss_pred HHHHHHhCchhhheeeeeccCccc----ccHH--HHHHHH------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999875310 0000 000000 000000000000 00000 00000
Q ss_pred cchhhhhccccccChh-hHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecC
Q 016533 259 LPSAVIAHRMDIFSRQ-DVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGD 337 (388)
Q Consensus 259 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~ 337 (388)
................ ....+..... . ........+...... .. ..+....+.+|++|+|+|+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~-~~-----~~d~~~~L~~I~~PvLvI~G~ 301 (360)
T PRK06489 236 TSGGTLAYQAQAPTRAAADKLVDERLA-------A-PVTADANDFLYQWDS-SR-----DYNPSPDLEKIKAPVLAINSA 301 (360)
T ss_pred HhCCHHHHHHhcCChHHHHHHHHHHHH-------h-hhhcCHHHHHHHHHH-hh-----ccChHHHHHhCCCCEEEEecC
Confidence 0000000000000000 0000000000 0 000000011100000 00 002233466788889999999
Q ss_pred CCCCCcHHHH--HHHHHhCCCceEEEeCCC----CCCcccC-CCchHHHHHHhhcC
Q 016533 338 EDRLVPVILQ--RYIVQRLPWIHYHELSGA----GHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 338 ~D~~~p~~~~--~~~~~~~~~~~~~~i~~~----gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
+|.++|++.+ +.+++.+|++++++++++ ||+++ | |+++++.|.+||++
T Consensus 302 ~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 302 DDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred CCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHh
Confidence 9999999875 789999999999999996 99997 7 99999999999975
No 10
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.98 E-value=1.5e-30 Score=238.55 Aligned_cols=304 Identities=16% Similarity=0.184 Sum_probs=179.9
Q ss_pred cCCCCCCCCCCCCCCccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHH
Q 016533 52 IQPPPPKTCGSPGGPAVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQE 131 (388)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (388)
.+++.+..+++.........+..+ +|.+++|...|+++.+.+++|||+||++++...|. .. .+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~---~~-----------~~~~ 224 (481)
T PLN03087 160 GQQLHPAPRWSDCDCKFCTSWLSS-SNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWT---ET-----------LFPN 224 (481)
T ss_pred CCCCCCCCcccccccceeeeeEee-CCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHH---HH-----------HHHH
Confidence 445556666666666666666665 66899999999875455789999999999999887 42 0233
Q ss_pred HHH--HhCeEEEEeCCCCcCCCCCCC--CCChhhHHHHHH-HHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeE
Q 016533 132 VIE--DLGVYIVSYDRAGYGESDPNP--NRTVKSDALDIE-ELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAG 206 (388)
Q Consensus 132 l~~--~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~dl~-~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~li 206 (388)
+.+ +.+|+|+++|+||||.|+.+. .++++++++++. .+++.++. ++++++||||||.+++.+|.++|++|+++|
T Consensus 225 L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~-~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LV 303 (481)
T PLN03087 225 FSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKV-KSFHIVAHSLGCILALALAVKHPGAVKSLT 303 (481)
T ss_pred HHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHhChHhccEEE
Confidence 432 237999999999999998653 478999999995 89999999 799999999999999999999999999999
Q ss_pred eeccccccCCCCCCchhh-HHHHh-hcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCC
Q 016533 207 LLAPVVNYWWPGFPANLS-KEAYY-QQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSP 284 (388)
Q Consensus 207 l~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (388)
++++.... .+.... ..... .......|... ....... .++..................+.+.....
T Consensus 304 Li~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~~~~~~l~~ 371 (481)
T PLN03087 304 LLAPPYYP----VPKGVQATQYVMRKVAPRRVWPPI---AFGASVA-----CWYEHISRTICLVICKNHRLWEFLTRLLT 371 (481)
T ss_pred EECCCccc----cccchhHHHHHHHHhcccccCCcc---ccchhHH-----HHHHHHHhhhhcccccchHHHHHHHHHhh
Confidence 99975321 111100 00000 00000000000 0000000 00000000000000000000000000000
Q ss_pred CchHHH--HHHH-h---hchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCce
Q 016533 285 EENNYM--ALAR-Q---QGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIH 358 (388)
Q Consensus 285 ~~~~~~--~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~ 358 (388)
...... .... . ......+. ........ ..+ ..+..-.+++++|+|+|+|++|.++|++..+.+++.+|+++
T Consensus 372 ~~~~~~~l~~~~~~~~~~~~~~~l~-~~i~~~~~-~l~-~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~ 448 (481)
T PLN03087 372 RNRMRTFLIEGFFCHTHNAAWHTLH-NIICGSGS-KLD-GYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRAR 448 (481)
T ss_pred hhhhhHHHHHHHHhccchhhHHHHH-HHHhchhh-hhh-hHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCE
Confidence 000000 0000 0 00000000 00000000 000 00001112467779999999999999999999999999999
Q ss_pred EEEeCCCCCCccc-C-CCchHHHHHHhhcC
Q 016533 359 YHELSGAGHMFPF-T-DGMSDTIVKAVLTG 386 (388)
Q Consensus 359 ~~~i~~~gH~~~~-e-~~~~~~~i~~fl~~ 386 (388)
+++++++||+++. | |+.+++.|.+|...
T Consensus 449 l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 449 VKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred EEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 9999999999885 8 99999999999864
No 11
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=2.4e-31 Score=240.86 Aligned_cols=276 Identities=16% Similarity=0.154 Sum_probs=165.9
Q ss_pred eEEcCCCc-EEEEEEcCCCC-CCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcC
Q 016533 72 RIKLRDGR-HLAYKEHGVPK-DNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYG 149 (388)
Q Consensus 72 ~~~~~~g~-~l~y~~~g~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G 149 (388)
.+.. +|. +++|.+.|++. .+.+++|||+||++++...|. .+ +..+.+ +|+|+++|+||||
T Consensus 65 ~~~~-~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~---~~------------~~~L~~--~~~via~Dl~G~G 126 (360)
T PLN02679 65 KWKW-KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWR---RN------------IGVLAK--NYTVYAIDLLGFG 126 (360)
T ss_pred eEEE-CCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHH---HH------------HHHHhc--CCEEEEECCCCCC
Confidence 4554 455 99999998641 113589999999999999999 77 666543 6999999999999
Q ss_pred CCCCCC--CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH-hCCcccceeEeeccccccCCCCCCchhhHH
Q 016533 150 ESDPNP--NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLK-YIPHRLAGAGLLAPVVNYWWPGFPANLSKE 226 (388)
Q Consensus 150 ~S~~~~--~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~-~~p~~v~~lil~~~~~~~~~~~~~~~~~~~ 226 (388)
.|+.+. .++++++++++.+++++++. ++++|+||||||.+++.++. .+|++|+++|++++...............
T Consensus 127 ~S~~~~~~~~~~~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~- 204 (360)
T PLN02679 127 ASDKPPGFSYTMETWAELILDFLEEVVQ-KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRI- 204 (360)
T ss_pred CCCCCCCccccHHHHHHHHHHHHHHhcC-CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHH-
Confidence 998653 57899999999999999999 79999999999999999887 47999999999998642110000000000
Q ss_pred HHhhcCCchhHHHHHHhhcchhhhhhcc----cccccchh-hhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhH
Q 016533 227 AYYQQLPQDQWAVRVAHYIPWLTYWWNT----QKWFLPSA-VIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYES 301 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (388)
.......+........+......+. ...+.... ..........+...+........ ......
T Consensus 205 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 271 (360)
T PLN02679 205 ---KLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADD----------EGALDA 271 (360)
T ss_pred ---hhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccC----------CChHHH
Confidence 0000000000000000000000000 00000000 00000001111111111100000 000011
Q ss_pred HHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHH-----HHHHHHhCCCceEEEeCCCCCCcccC-CCc
Q 016533 302 LHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVIL-----QRYIVQRLPWIHYHELSGAGHMFPFT-DGM 375 (388)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~-----~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~ 375 (388)
+.. ....... .+....++++++|+|+|+|++|.++|++. .+.+.+.++++++++++++||+++.| |++
T Consensus 272 ~~~-~~~~~~~-----~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~ 345 (360)
T PLN02679 272 FVS-IVTGPPG-----PNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDL 345 (360)
T ss_pred HHH-HHhcCCC-----CCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHH
Confidence 111 0000000 01112345678889999999999998763 34566778999999999999999999 999
Q ss_pred hHHHHHHhhcC
Q 016533 376 SDTIVKAVLTG 386 (388)
Q Consensus 376 ~~~~i~~fl~~ 386 (388)
+++.|.+||++
T Consensus 346 ~~~~I~~FL~~ 356 (360)
T PLN02679 346 VHEKLLPWLAQ 356 (360)
T ss_pred HHHHHHHHHHh
Confidence 99999999975
No 12
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=6.3e-31 Score=228.31 Aligned_cols=252 Identities=15% Similarity=0.152 Sum_probs=164.4
Q ss_pred EEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCCh
Q 016533 80 HLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTV 159 (388)
Q Consensus 80 ~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~ 159 (388)
+++|+..+......+++|||+||++++...|. .+ ...+.+ +|+|+++|+||||.|.....+++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~---~~------------~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~ 64 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLG---VL------------ARDLVN--DHDIIQVDMRNHGLSPRDPVMNY 64 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHH---HH------------HHHHhh--CCeEEEECCCCCCCCCCCCCCCH
Confidence 45677654433345899999999999999998 77 566544 59999999999999998778899
Q ss_pred hhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHH
Q 016533 160 KSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAV 239 (388)
Q Consensus 160 ~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
+++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++...... .......+..
T Consensus 65 ~~~~~d~~~~l~~l~~-~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~----~~~~~~~~~~--------- 130 (255)
T PRK10673 65 PAMAQDLLDTLDALQI-EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH----VRRHDEIFAA--------- 130 (255)
T ss_pred HHHHHHHHHHHHHcCC-CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc----chhhHHHHHH---------
Confidence 9999999999999998 6899999999999999999999999999999985421100 0000000000
Q ss_pred HHHhhcchhhhhhcccccccchhhhhccccccCh-hhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCC
Q 016533 240 RVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSR-QDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPL 318 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (388)
...... ................+.. ............... ............ ..
T Consensus 131 -~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~-------- 185 (255)
T PRK10673 131 -INAVSE--------AGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEW-------RFNVPVLWDQYP-HI-------- 185 (255)
T ss_pred -HHHhhh--------cccccHHHHHHHHHHhcCCHHHHHHHHhcCCccee-------EeeHHHHHHhHH-HH--------
Confidence 000000 0000000000000000000 000000000000000 000000000000 00
Q ss_pred CCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhcCC
Q 016533 319 DLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLTGD 387 (388)
Q Consensus 319 ~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 387 (388)
.....++++++|+|+|+|++|..++.+..+.+.+.++++++++++++||+++.| |+++.+.|.+||.++
T Consensus 186 ~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 186 VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhcC
Confidence 001234567888999999999999999999999999999999999999999999 999999999999864
No 13
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=8.7e-31 Score=226.97 Aligned_cols=243 Identities=14% Similarity=0.058 Sum_probs=154.7
Q ss_pred ceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC--CCChhhHHHHHHHHHHH
Q 016533 95 YKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP--NRTVKSDALDIEELADQ 172 (388)
Q Consensus 95 ~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~dl~~~l~~ 172 (388)
-.|||+||++.+...|. .+ +..|.++ ||+|+++|+||||.|+... .++++++++|+.++++.
T Consensus 4 ~~vvllHG~~~~~~~w~---~~------------~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 67 (255)
T PLN02965 4 IHFVFVHGASHGAWCWY---KL------------ATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSD 67 (255)
T ss_pred eEEEEECCCCCCcCcHH---HH------------HHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHh
Confidence 35999999999999998 77 5666544 7999999999999997543 47899999999999999
Q ss_pred hCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhh
Q 016533 173 LGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWW 252 (388)
Q Consensus 173 l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (388)
++..++++++||||||.+++.++.++|++|+++|++++.... +.......+..... .......
T Consensus 68 l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~-----~~~~~~~~~~~~~~----------~~~~~~~-- 130 (255)
T PLN02965 68 LPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVK-----PGSIISPRLKNVME----------GTEKIWD-- 130 (255)
T ss_pred cCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCC-----CCCCccHHHHhhhh----------cccccee--
Confidence 986349999999999999999999999999999999985320 10000000000000 0000000
Q ss_pred cccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHH---hhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCc
Q 016533 253 NTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALAR---QQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEG 329 (388)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~ 329 (388)
..+..................... .............. .......+ ....++...+.++++
T Consensus 131 ---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~i~v 194 (255)
T PLN02965 131 ---YTFGEGPDKPPTGIMMKPEFVRHY-YYNQSPLEDYTLSSKLLRPAPVRAF------------QDLDKLPPNPEAEKV 194 (255)
T ss_pred ---eeeccCCCCCcchhhcCHHHHHHH-HhcCCCHHHHHHHHHhcCCCCCcch------------hhhhhccchhhcCCC
Confidence 000000000000000000000000 00000000000000 00000000 000112223456788
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhcC
Q 016533 330 SVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 330 Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
|+++|+|++|.++|++..+.+.+.++++++++++++||+++.| |+.+++.|.+|++.
T Consensus 195 P~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 195 PRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred CEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999 99999999999874
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=3.4e-30 Score=227.12 Aligned_cols=259 Identities=15% Similarity=0.164 Sum_probs=158.6
Q ss_pred CcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCC-
Q 016533 78 GRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPN- 156 (388)
Q Consensus 78 g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~- 156 (388)
|.+++|...|. +++|||+||++++...|. .+. ..+..+.++ ||+|+++|+||||.|+....
T Consensus 19 ~~~~~y~~~g~-----~~~ivllHG~~~~~~~~~---~~~---------~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~ 80 (282)
T TIGR03343 19 NFRIHYNEAGN-----GEAVIMLHGGGPGAGGWS---NYY---------RNIGPFVDA-GYRVILKDSPGFNKSDAVVMD 80 (282)
T ss_pred ceeEEEEecCC-----CCeEEEECCCCCchhhHH---HHH---------HHHHHHHhC-CCEEEEECCCCCCCCCCCcCc
Confidence 56789998764 578999999998887775 320 002344443 89999999999999985431
Q ss_pred -CChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCch-hhHHHHhhcCCc
Q 016533 157 -RTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPAN-LSKEAYYQQLPQ 234 (388)
Q Consensus 157 -~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 234 (388)
.....+++|+.++++.++. ++++++||||||.+++.+|.++|++|+++|++++.........+.. .....+......
T Consensus 81 ~~~~~~~~~~l~~~l~~l~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (282)
T TIGR03343 81 EQRGLVNARAVKGLMDALDI-EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAE 159 (282)
T ss_pred ccccchhHHHHHHHHHHcCC-CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcC
Confidence 2222578999999999999 7999999999999999999999999999999997532100000000 000000000000
Q ss_pred hhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHH-HhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCc
Q 016533 235 DQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEV-LSKWSPEENNYMALARQQGEYESLHRDMMVGFGTW 313 (388)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (388)
... .... .......+. .........+. ......... ....+.. .....
T Consensus 160 ~~~-~~~~--------~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~----~~~~~ 208 (282)
T TIGR03343 160 PSY-ETLK--------QMLNVFLFD--------QSLITEELLQGRWENIQRQPE----------HLKNFLI----SSQKA 208 (282)
T ss_pred CCH-HHHH--------HHHhhCccC--------cccCcHHHHHhHHHHhhcCHH----------HHHHHHH----hcccc
Confidence 000 0000 000000000 00001000000 000000000 0000000 00000
Q ss_pred CCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhcC
Q 016533 314 EFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 314 ~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
.....+....++++++|+|+++|++|.+++++.++.+++.+|++++++++++||+++.| |+.+.+.|.+||+.
T Consensus 209 ~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 209 PLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred ccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 00011222345678888999999999999999999999999999999999999999999 99999999999963
No 15
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=2.4e-30 Score=232.77 Aligned_cols=270 Identities=17% Similarity=0.116 Sum_probs=166.5
Q ss_pred CCCCCccccCeEEcCCCcEEEEEEcCCCCC-CCCceEEEEccCCCCCc-cccccccCCCCCccccccCchHHHHHHhCeE
Q 016533 62 SPGGPAVTAPRIKLRDGRHLAYKEHGVPKD-NAKYKIFFVHGFDSCRH-DSAVANFLSPFMPILWCGGIYQEVIEDLGVY 139 (388)
Q Consensus 62 ~~~~~~~~~~~~~~~~g~~l~y~~~g~~~~-~~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 139 (388)
.+.+...+..++...||.+|+|+.++++.. +.+++|||+||++.+.. .|. .+ ...+ .+.||+
T Consensus 26 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~---~~------------~~~L-~~~Gy~ 89 (330)
T PLN02298 26 ALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQ---ST------------AIFL-AQMGFA 89 (330)
T ss_pred hccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehh---HH------------HHHH-HhCCCE
Confidence 344555667788888999999998876432 34678999999986643 233 22 2334 445999
Q ss_pred EEEeCCCCcCCCCCCCC--CChhhHHHHHHHHHHHhCC-----CCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 140 IVSYDRAGYGESDPNPN--RTVKSDALDIEELADQLGV-----GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 140 vi~~D~~G~G~S~~~~~--~~~~~~~~dl~~~l~~l~~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
|+++|+||||.|+.... .+++++++|+.++++.+.. +.+++|+||||||.+++.++..+|++|+++|+++|..
T Consensus 90 V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 90 CFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred EEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 99999999999975443 4788999999999998743 1479999999999999999999999999999999875
Q ss_pred ccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhh-----cCCCch
Q 016533 213 NYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSK-----WSPEEN 287 (388)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 287 (388)
.......+.. ... ..........+...... ....+. ..........+.. +.....
T Consensus 170 ~~~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 229 (330)
T PLN02298 170 KISDKIRPPW-PIP---------QILTFVARFLPTLAIVP-TADLLE---------KSVKVPAKKIIAKRNPMRYNGKPR 229 (330)
T ss_pred cCCcccCCch-HHH---------HHHHHHHHHCCCCcccc-CCCccc---------ccccCHHHHHHHHhCccccCCCcc
Confidence 3211100000 000 00000111111100000 000000 0000000000000 000000
Q ss_pred HHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCC--CceEEEeCCC
Q 016533 288 NYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLP--WIHYHELSGA 365 (388)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~--~~~~~~i~~~ 365 (388)
. .....+..... .+...+.++++|+|+|+|++|.++|++.++.+++.++ ++++++++++
T Consensus 230 ~--------~~~~~~~~~~~-----------~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a 290 (330)
T PLN02298 230 L--------GTVVELLRVTD-----------YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGM 290 (330)
T ss_pred H--------HHHHHHHHHHH-----------HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCc
Confidence 0 00000000000 1112345667889999999999999999999988874 7899999999
Q ss_pred CCCcccC-CCc----hHHHHHHhhcC
Q 016533 366 GHMFPFT-DGM----SDTIVKAVLTG 386 (388)
Q Consensus 366 gH~~~~e-~~~----~~~~i~~fl~~ 386 (388)
||.++.+ |+. +.+.|.+||.+
T Consensus 291 ~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 291 MHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred EeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 9999987 754 56677788764
No 16
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=1.5e-29 Score=222.51 Aligned_cols=265 Identities=18% Similarity=0.194 Sum_probs=169.9
Q ss_pred eEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCC
Q 016533 72 RIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGES 151 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 151 (388)
.+++ +|.+++|...|+. .+++|||+||++++...|. .+ +..+.+ +|+|+++|+||||.|
T Consensus 10 ~~~~-~~~~~~~~~~g~~---~~~~vv~~hG~~~~~~~~~---~~------------~~~l~~--~~~vi~~D~~G~G~S 68 (278)
T TIGR03056 10 RVTV-GPFHWHVQDMGPT---AGPLLLLLHGTGASTHSWR---DL------------MPPLAR--SFRVVAPDLPGHGFT 68 (278)
T ss_pred eeeE-CCEEEEEEecCCC---CCCeEEEEcCCCCCHHHHH---HH------------HHHHhh--CcEEEeecCCCCCCC
Confidence 4444 8999999998764 3689999999999999998 77 566644 599999999999999
Q ss_pred CCCC--CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHh
Q 016533 152 DPNP--NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYY 229 (388)
Q Consensus 152 ~~~~--~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~ 229 (388)
+.+. .++++++++|+.+++++++. ++++|+||||||.+++.+|..+|++++++|++++...... ....... ....
T Consensus 69 ~~~~~~~~~~~~~~~~l~~~i~~~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-~~~~~~~-~~~~ 145 (278)
T TIGR03056 69 RAPFRFRFTLPSMAEDLSALCAAEGL-SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFE-GMAGTLF-PYMA 145 (278)
T ss_pred CCccccCCCHHHHHHHHHHHHHHcCC-CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccc-ccccccc-chhh
Confidence 8544 47999999999999999998 7999999999999999999999999999999997543100 0000000 0000
Q ss_pred hcCCchhHHHHHHhhcchhhhhhc-ccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHh
Q 016533 230 QQLPQDQWAVRVAHYIPWLTYWWN-TQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMV 308 (388)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (388)
.... ............. ....... ........................ ..... ...
T Consensus 146 ~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~----~~~ 202 (278)
T TIGR03056 146 RVLA-------CNPFTPPMMSRGAADQQRVER--LIRDTGSLLDKAGMTYYGRLIRSP----------AHVDG----ALS 202 (278)
T ss_pred Hhhh-------hcccchHHHHhhcccCcchhH--HhhccccccccchhhHHHHhhcCc----------hhhhH----HHH
Confidence 0000 0000000000000 0000000 000000000100000000000000 00000 001
Q ss_pred hccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhc
Q 016533 309 GFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLT 385 (388)
Q Consensus 309 ~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 385 (388)
....|... .....++++++|+++|+|++|.++|++..+.+.+.++++++++++++||+++.| |+++++.|.+|++
T Consensus 203 ~~~~~~~~--~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 203 MMAQWDLA--PLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred Hhhccccc--chhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 11112111 222346678899999999999999999999999999999999999999999999 9999999999984
No 17
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.97 E-value=6.6e-31 Score=228.13 Aligned_cols=250 Identities=13% Similarity=0.094 Sum_probs=153.9
Q ss_pred EEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChh
Q 016533 81 LAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVK 160 (388)
Q Consensus 81 l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 160 (388)
++|...|.+ .++|||+||+++++..|. .+ +..+.+ .|+|+++|+||||.|+....++++
T Consensus 4 ~~y~~~G~g----~~~ivllHG~~~~~~~w~---~~------------~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~ 62 (256)
T PRK10349 4 IWWQTKGQG----NVHLVLLHGWGLNAEVWR---CI------------DEELSS--HFTLHLVDLPGFGRSRGFGALSLA 62 (256)
T ss_pred cchhhcCCC----CCeEEEECCCCCChhHHH---HH------------HHHHhc--CCEEEEecCCCCCCCCCCCCCCHH
Confidence 678877742 357999999999999999 77 566644 499999999999999866566777
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHH
Q 016533 161 SDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVR 240 (388)
Q Consensus 161 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
++++++.+ +.. ++++++||||||.+++.+|.++|++|+++|++++.................... +...
T Consensus 63 ~~~~~l~~----~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~------~~~~ 131 (256)
T PRK10349 63 DMAEAVLQ----QAP-DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAG------FQQQ 131 (256)
T ss_pred HHHHHHHh----cCC-CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHH------HHHH
Confidence 77776653 456 799999999999999999999999999999999753211000000000000000 0000
Q ss_pred HHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCC
Q 016533 241 VAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDL 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (388)
.......... .++.. ........................ .....+..... ... ..++
T Consensus 132 ~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~-----~~~~ 188 (256)
T PRK10349 132 LSDDFQRTVE-----RFLAL---QTMGTETARQDARALKKTVLALPM---------PEVDVLNGGLE-ILK-----TVDL 188 (256)
T ss_pred HHhchHHHHH-----HHHHH---HHccCchHHHHHHHHHHHhhccCC---------CcHHHHHHHHH-HHH-----hCcc
Confidence 0000000000 00000 000000000000000000000000 00000000000 000 0023
Q ss_pred CCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhc
Q 016533 321 KNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLT 385 (388)
Q Consensus 321 ~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 385 (388)
...++++++|+|+|+|++|.++|.+..+.+.+.++++++++++++||++++| |+.|++.|.+|-+
T Consensus 189 ~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 189 RQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred HHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 3356678888999999999999999999999999999999999999999999 9999999999854
No 18
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=7.2e-30 Score=229.93 Aligned_cols=277 Identities=16% Similarity=0.131 Sum_probs=172.7
Q ss_pred CCccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeC
Q 016533 65 GPAVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYD 144 (388)
Q Consensus 65 ~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 144 (388)
+..+........+|.+++|...|+. .+++|||+||++++...|. .+ +..+.+ +|+|+++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~y~~~G~~---~~~~ivllHG~~~~~~~w~---~~------------~~~L~~--~~~Via~D 160 (383)
T PLN03084 101 GLKMGAQSQASSDLFRWFCVESGSN---NNPPVLLIHGFPSQAYSYR---KV------------LPVLSK--NYHAIAFD 160 (383)
T ss_pred cccccceeEEcCCceEEEEEecCCC---CCCeEEEECCCCCCHHHHH---HH------------HHHHhc--CCEEEEEC
Confidence 3444455555678999999999864 3689999999999999999 87 666643 69999999
Q ss_pred CCCcCCCCCCC-----CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCC
Q 016533 145 RAGYGESDPNP-----NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGF 219 (388)
Q Consensus 145 ~~G~G~S~~~~-----~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~ 219 (388)
+||||.|+.+. .++++++++++.++++++++ ++++|+|||+||.+++.+|..+|++|+++|++++.........
T Consensus 161 lpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~-~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~ 239 (383)
T PLN03084 161 WLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKS-DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKL 239 (383)
T ss_pred CCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCC-CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccc
Confidence 99999998653 47999999999999999999 7999999999999999999999999999999998642110000
Q ss_pred CchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchh
Q 016533 220 PANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEY 299 (388)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (388)
+.. ...+.... . .......+... ....+. ..............+......... . ... .
T Consensus 240 p~~--l~~~~~~l----~-~~~~~~~~~~~----~~~~~~-----~~~~~~~~~e~~~~~~~~~~~~~~-~-~~~----l 297 (383)
T PLN03084 240 PST--LSEFSNFL----L-GEIFSQDPLRA----SDKALT-----SCGPYAMKEDDAMVYRRPYLTSGS-S-GFA----L 297 (383)
T ss_pred hHH--HHHHHHHH----h-hhhhhcchHHH----Hhhhhc-----ccCccCCCHHHHHHHhccccCCcc-h-HHH----H
Confidence 100 00000000 0 00000000000 000000 000001111111111111111000 0 000 0
Q ss_pred hHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHH
Q 016533 300 ESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDT 378 (388)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~ 378 (388)
..+...+......+..+.... ....++++|+++|+|++|.+++.+..+.+++. +++++++++++||+++.| |+++++
T Consensus 298 ~~~~r~~~~~l~~~~~~l~~~-l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~ 375 (383)
T PLN03084 298 NAISRSMKKELKKYIEEMRSI-LTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGG 375 (383)
T ss_pred HHHHHHhhcccchhhHHHHhh-hccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHH
Confidence 000011000000000000000 00134677899999999999999998888887 588999999999999999 999999
Q ss_pred HHHHhhcC
Q 016533 379 IVKAVLTG 386 (388)
Q Consensus 379 ~i~~fl~~ 386 (388)
.|.+||+.
T Consensus 376 ~I~~Fl~~ 383 (383)
T PLN03084 376 IISGILSK 383 (383)
T ss_pred HHHHHhhC
Confidence 99999863
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=1.5e-29 Score=219.74 Aligned_cols=254 Identities=18% Similarity=0.223 Sum_probs=162.1
Q ss_pred EEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCC--CCCC
Q 016533 81 LAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPN--PNRT 158 (388)
Q Consensus 81 l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~--~~~~ 158 (388)
++|+..|++. ..+++|||+||++++...|. .+ +..+ .+ +|+|+++|+||||.|+.. ..++
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~~~~---~~------------~~~l-~~-~~~vi~~D~~G~G~S~~~~~~~~~ 62 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGSYWA---PQ------------LDVL-TQ-RFHVVTYDHRGTGRSPGELPPGYS 62 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchhHHH---HH------------HHHH-Hh-ccEEEEEcCCCCCCCCCCCcccCC
Confidence 4688888643 34789999999999999998 66 4444 33 699999999999999753 3579
Q ss_pred hhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHH
Q 016533 159 VKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWA 238 (388)
Q Consensus 159 ~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (388)
++++++++.+++++++. ++++++||||||.+++.++.++|++|+++|++++.... ... ....+... ..+.
T Consensus 63 ~~~~~~~~~~~i~~~~~-~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-----~~~-~~~~~~~~---~~~~ 132 (257)
T TIGR03611 63 IAHMADDVLQLLDALNI-ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP-----DPH-TRRCFDVR---IALL 132 (257)
T ss_pred HHHHHHHHHHHHHHhCC-CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC-----Chh-HHHHHHHH---HHHH
Confidence 99999999999999998 79999999999999999999999999999999976431 000 00000000 0000
Q ss_pred HHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCC
Q 016533 239 VRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPL 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (388)
................+.. ...................... .......... ....+
T Consensus 133 ---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~-~~~~~----- 188 (257)
T TIGR03611 133 ---QHAGPEAYVHAQALFLYPA-DWISENAARLAADEAHALAHFP--------------GKANVLRRIN-ALEAF----- 188 (257)
T ss_pred ---hccCcchhhhhhhhhhccc-cHhhccchhhhhhhhhcccccC--------------ccHHHHHHHH-HHHcC-----
Confidence 0000000000000000000 0000000000000000000000 0000000000 00000
Q ss_pred CCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhcC
Q 016533 319 DLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 319 ~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
++...+.++++|+++++|++|.++|++.++.+.+.+++++++.++++||+++++ |+++.+.|.+||+.
T Consensus 189 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 189 DVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 222345567888999999999999999999999999999999999999999999 99999999999963
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=2e-29 Score=226.06 Aligned_cols=273 Identities=15% Similarity=0.174 Sum_probs=164.7
Q ss_pred CeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCC
Q 016533 71 PRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGE 150 (388)
Q Consensus 71 ~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~ 150 (388)
.++...+|.+++|..++++ .++++||++||++++...|. .+ +..+.+ .||+|+++|+||||.
T Consensus 33 ~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y~---~~------------~~~l~~-~g~~v~~~D~~G~G~ 94 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYVKYA---EL------------AYDLFH-LGYDVLIIDHRGQGR 94 (330)
T ss_pred eEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHHHHH---HH------------HHHHHH-CCCeEEEEcCCCCCC
Confidence 3566679999999999864 34679999999999888887 66 455554 499999999999999
Q ss_pred CCCCC-------CCChhhHHHHHHHHHHHh----CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCC
Q 016533 151 SDPNP-------NRTVKSDALDIEELADQL----GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGF 219 (388)
Q Consensus 151 S~~~~-------~~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~ 219 (388)
|+... .++++++++|+.++++.+ +. .+++++||||||.+++.++.++|++|+++|+++|......+ .
T Consensus 95 S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~-~ 172 (330)
T PRK10749 95 SGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPY-RKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLP-L 172 (330)
T ss_pred CCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCC-C
Confidence 97432 147899999999999887 55 69999999999999999999999999999999986432110 0
Q ss_pred CchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhh---HHHHhhcCCCchHHHHHHHhh
Q 016533 220 PANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQD---VEVLSKWSPEENNYMALARQQ 296 (388)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 296 (388)
+.... ..+.. +......... ........+.... .....++... ......+...+... ...
T Consensus 173 ~~~~~-~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~ 235 (330)
T PRK10749 173 PSWMA-RRILN------WAEGHPRIRD--GYAIGTGRWRPLP----FAINVLTHSRERYRRNLRFYADDPELR----VGG 235 (330)
T ss_pred CcHHH-HHHHH------HHHHhcCCCC--cCCCCCCCCCCCC----cCCCCCCCCHHHHHHHHHHHHhCCCcc----cCC
Confidence 10000 00000 0000000000 0000000010000 0000000000 01111111110000 000
Q ss_pred chhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC-------CCceEEEeCCCCCCc
Q 016533 297 GEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL-------PWIHYHELSGAGHMF 369 (388)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~-------~~~~~~~i~~~gH~~ 369 (388)
.........+.. .. .+...++++++|+|+|+|++|.+++++.++.+++.+ +++++++++|+||.+
T Consensus 236 ~~~~~~~~~~~~-~~-------~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~ 307 (330)
T PRK10749 236 PTYHWVRESILA-GE-------QVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEI 307 (330)
T ss_pred CcHHHHHHHHHH-HH-------HHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchh
Confidence 000000000000 00 011124456777999999999999999998888866 356899999999999
Q ss_pred ccC-C---CchHHHHHHhhcCCC
Q 016533 370 PFT-D---GMSDTIVKAVLTGDK 388 (388)
Q Consensus 370 ~~e-~---~~~~~~i~~fl~~~~ 388 (388)
+.| + +.+.+.|.+||++.+
T Consensus 308 ~~E~~~~r~~v~~~i~~fl~~~~ 330 (330)
T PRK10749 308 LFEKDAMRSVALNAIVDFFNRHN 330 (330)
T ss_pred hhCCcHHHHHHHHHHHHHHhhcC
Confidence 998 5 457788889987653
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=6.8e-29 Score=217.96 Aligned_cols=257 Identities=16% Similarity=0.150 Sum_probs=160.2
Q ss_pred eEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCC
Q 016533 72 RIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGES 151 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 151 (388)
++..+||.+|+|+.|.+. ...++.|+++||+++++..|. .+ +..+.+ .||+|+++|+||||.|
T Consensus 4 ~~~~~~g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~~~---~~------------~~~l~~-~g~~via~D~~G~G~S 66 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI-TYPKALVFISHGAGEHSGRYE---EL------------AENISS-LGILVFSHDHIGHGRS 66 (276)
T ss_pred eeecCCCCEEEEEeccCC-CCCCEEEEEeCCCccccchHH---HH------------HHHHHh-CCCEEEEccCCCCCCC
Confidence 566779999999998654 345677888899999999998 77 566655 4899999999999999
Q ss_pred CCCCC--CChhhHHHHHHHHHHHh----CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhH
Q 016533 152 DPNPN--RTVKSDALDIEELADQL----GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSK 225 (388)
Q Consensus 152 ~~~~~--~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 225 (388)
+.... .++.++++|+.+.++.+ .. .+++|+||||||.+++.+|.++|++|+++|+++|.... .....
T Consensus 67 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~-~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~------~~~~~ 139 (276)
T PHA02857 67 NGEKMMIDDFGVYVRDVVQHVVTIKSTYPG-VPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA------EAVPR 139 (276)
T ss_pred CCccCCcCCHHHHHHHHHHHHHHHHhhCCC-CCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc------ccccH
Confidence 75431 35566677777777654 23 58999999999999999999999999999999986431 00000
Q ss_pred HHHhhcCCchhHHHHH-HhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHH
Q 016533 226 EAYYQQLPQDQWAVRV-AHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHR 304 (388)
Q Consensus 226 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (388)
.. ...... ....+.. ....+. ...+.....+. ......+.. ........+..
T Consensus 140 ~~--------~~~~~~~~~~~~~~----~~~~~~---------~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~ 192 (276)
T PHA02857 140 LN--------LLAAKLMGIFYPNK----IVGKLC---------PESVSRDMDEV-YKYQYDPLV-----NHEKIKAGFAS 192 (276)
T ss_pred HH--------HHHHHHHHHhCCCC----ccCCCC---------HhhccCCHHHH-HHHhcCCCc-----cCCCccHHHHH
Confidence 00 000000 0000000 000000 00001000000 000000000 00000000000
Q ss_pred HHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC-CCceEEEeCCCCCCcccC-CC---chHHH
Q 016533 305 DMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL-PWIHYHELSGAGHMFPFT-DG---MSDTI 379 (388)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e-~~---~~~~~ 379 (388)
....... .+...++++++|+|+++|++|.++|++.++.+.+.+ +++++++++++||.++.| ++ ++.+.
T Consensus 193 ~~~~~~~-------~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~ 265 (276)
T PHA02857 193 QVLKATN-------KVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKE 265 (276)
T ss_pred HHHHHHH-------HHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHH
Confidence 0000000 112245567788999999999999999999999887 568999999999999988 53 57788
Q ss_pred HHHhhcC
Q 016533 380 VKAVLTG 386 (388)
Q Consensus 380 i~~fl~~ 386 (388)
+.+||++
T Consensus 266 ~~~~l~~ 272 (276)
T PHA02857 266 IETWIFN 272 (276)
T ss_pred HHHHHHH
Confidence 8888875
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=3.6e-29 Score=216.23 Aligned_cols=248 Identities=17% Similarity=0.209 Sum_probs=161.1
Q ss_pred EEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC-CCCh
Q 016533 81 LAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP-NRTV 159 (388)
Q Consensus 81 l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~ 159 (388)
++|...|++ +.+|+|||+||++.+...|. .+ +..+ .+ ||+|+++|+||||.|+... .++.
T Consensus 2 ~~~~~~g~~--~~~~~li~~hg~~~~~~~~~---~~------------~~~l-~~-~~~v~~~d~~G~G~s~~~~~~~~~ 62 (251)
T TIGR02427 2 LHYRLDGAA--DGAPVLVFINSLGTDLRMWD---PV------------LPAL-TP-DFRVLRYDKRGHGLSDAPEGPYSI 62 (251)
T ss_pred ceEEeecCC--CCCCeEEEEcCcccchhhHH---HH------------HHHh-hc-ccEEEEecCCCCCCCCCCCCCCCH
Confidence 678777754 24689999999999999998 77 5554 33 7999999999999997543 5689
Q ss_pred hhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHH
Q 016533 160 KSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAV 239 (388)
Q Consensus 160 ~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
+++++|+.++++.++. ++++++||||||.+++.+|.++|++|+++|++++...... + ............ ..
T Consensus 63 ~~~~~~~~~~i~~~~~-~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~---~-~~~~~~~~~~~~-~~--- 133 (251)
T TIGR02427 63 EDLADDVLALLDHLGI-ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGT---P-ESWNARIAAVRA-EG--- 133 (251)
T ss_pred HHHHHHHHHHHHHhCC-CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCc---h-hhHHHHHhhhhh-cc---
Confidence 9999999999999998 7999999999999999999999999999999987532110 0 000000000000 00
Q ss_pred HHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCC
Q 016533 240 RVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLD 319 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (388)
...........+....+.. ......+....... ......+.... .. ....+
T Consensus 134 -~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-----------~~~~~~~~~~~-~~-----~~~~~ 184 (251)
T TIGR02427 134 -LAALADAVLERWFTPGFRE-----------AHPARLDLYRNMLV-----------RQPPDGYAGCC-AA-----IRDAD 184 (251)
T ss_pred -HHHHHHHHHHHHccccccc-----------CChHHHHHHHHHHH-----------hcCHHHHHHHH-HH-----Hhccc
Confidence 0000000000000000000 00000000000000 00000000000 00 00012
Q ss_pred CCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhc
Q 016533 320 LKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLT 385 (388)
Q Consensus 320 ~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 385 (388)
+...+.++++|+++++|++|.++|.+..+.+.+.+++.++++++++||+.+.+ |+.+.+.|.+|+.
T Consensus 185 ~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 185 FRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred HHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 22345567888999999999999999999999999999999999999999999 9999999999984
No 23
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=6.7e-29 Score=224.05 Aligned_cols=267 Identities=17% Similarity=0.104 Sum_probs=155.6
Q ss_pred CCcEEEEEEcCCCCCCCCceEEEEccCCCCCc------------cccccccCCCCCccccccCchH---HHHHHhCeEEE
Q 016533 77 DGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRH------------DSAVANFLSPFMPILWCGGIYQ---EVIEDLGVYIV 141 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~---~l~~~~g~~vi 141 (388)
+|.+++|...|+. ++++||+||+.++.. .|. .+ +. .|..+ +|+||
T Consensus 44 ~~~~l~y~~~G~~----~~p~vll~g~~~~~~~~~~~~~~~~~~~w~---~~------------v~~~~~L~~~-~~~Vi 103 (343)
T PRK08775 44 EDLRLRYELIGPA----GAPVVFVAGGISAHRHVAATATFPEKGWWE---GL------------VGSGRALDPA-RFRLL 103 (343)
T ss_pred CCceEEEEEeccC----CCCEEEEecCCCcccccccccCCCCCCcch---hc------------cCCCCccCcc-ccEEE
Confidence 7889999999853 335777776666655 465 45 43 34333 59999
Q ss_pred EeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCc
Q 016533 142 SYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPA 221 (388)
Q Consensus 142 ~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~ 221 (388)
++|+||||.|.. ..++.+++++|+.++++++++++.++|+||||||++++.+|.+||++|+++|++++.... .+.
T Consensus 104 ~~Dl~G~g~s~~-~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~----~~~ 178 (343)
T PRK08775 104 AFDFIGADGSLD-VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRA----HPY 178 (343)
T ss_pred EEeCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccC----CHH
Confidence 999999998853 457889999999999999999433589999999999999999999999999999986321 010
Q ss_pred hhhHHHHhhc---CC-c---hhHHHHHHhhcchhhhhhcccccccchhhhhcc---ccccChhhHHHHhhcCCCchHHHH
Q 016533 222 NLSKEAYYQQ---LP-Q---DQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHR---MDIFSRQDVEVLSKWSPEENNYMA 291 (388)
Q Consensus 222 ~~~~~~~~~~---~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 291 (388)
.......... .. . ............ ...+.....+.. ...... ...........+.... .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~-------~ 248 (343)
T PRK08775 179 AAAWRALQRRAVALGQLQCAEKHGLALARQLA--MLSYRTPEEFEE-RFDAPPEVINGRVRVAAEDYLDAAG-------A 248 (343)
T ss_pred HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHH--HHHcCCHHHHHH-HhCCCccccCCCccchHHHHHHHHH-------H
Confidence 0000000000 00 0 000000000000 000000000000 000000 0000000000000000 0
Q ss_pred HHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC-CCceEEEeCC-CCCCc
Q 016533 292 LARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL-PWIHYHELSG-AGHMF 369 (388)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~-~gH~~ 369 (388)
..........+..... ... . -...++++++|+|+|+|++|.++|++..+.+.+.+ ++++++++++ +||++
T Consensus 249 ~~~~~~~~~~~~~~~~-~~~---~----~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~ 320 (343)
T PRK08775 249 QYVARTPVNAYLRLSE-SID---L----HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDA 320 (343)
T ss_pred HHHHhcChhHHHHHHH-HHh---h----cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHH
Confidence 0000000000100000 000 0 01125578888999999999999999998998888 7999999985 99999
Q ss_pred ccC-CCchHHHHHHhhcC
Q 016533 370 PFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 370 ~~e-~~~~~~~i~~fl~~ 386 (388)
++| |++|++.|.+||++
T Consensus 321 ~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 321 FLKETDRIDAILTTALRS 338 (343)
T ss_pred HhcCHHHHHHHHHHHHHh
Confidence 999 99999999999975
No 24
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=7.7e-29 Score=223.75 Aligned_cols=274 Identities=14% Similarity=0.150 Sum_probs=156.2
Q ss_pred CCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCch---HHHHHHhCeEEEEeCCCCcCCCCC
Q 016533 77 DGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIY---QEVIEDLGVYIVSYDRAGYGESDP 153 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~g~~vi~~D~~G~G~S~~ 153 (388)
+|.+++|...|++.....++||++||++++...|. .+ + ..+..+ +|+||++|+||||.|+.
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~---~~------------~~~~~~l~~~-~~~vi~~D~~G~G~S~~ 87 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNE---WL------------IGPGRALDPE-KYFIIIPNMFGNGLSSS 87 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccch---hh------------ccCCCccCcC-ceEEEEecCCCCCCCCC
Confidence 67889999998642223467777788887776665 32 1 233333 69999999999999975
Q ss_pred CC----CCChhh-----HHHHHHH----HHHHhCCCCc-EEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCC
Q 016533 154 NP----NRTVKS-----DALDIEE----LADQLGVGSK-FYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGF 219 (388)
Q Consensus 154 ~~----~~~~~~-----~~~dl~~----~l~~l~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~ 219 (388)
+. .+++++ +++|+.+ +++++++ ++ ++||||||||++|+.+|.+||++|+++|++++... .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi-~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~-----~ 161 (339)
T PRK07581 88 PSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGI-ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK-----T 161 (339)
T ss_pred CCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCC-CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC-----C
Confidence 43 244443 5666665 7788999 68 58999999999999999999999999999987532 1
Q ss_pred Cchhh--HHHHhhcC-CchhHH---------HHHHhhcchhhhhhcccccccchhhhhccccccC----hhhH-HHHhhc
Q 016533 220 PANLS--KEAYYQQL-PQDQWA---------VRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFS----RQDV-EVLSKW 282 (388)
Q Consensus 220 ~~~~~--~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~ 282 (388)
..... ........ ....|. .............++...++.. ....... .... ......
T Consensus 162 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 236 (339)
T PRK07581 162 TPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQ-----ELWRAMGYASLEDFLVGFWEGN 236 (339)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHh-----hhccccChhhHHHHHHHHHHHh
Confidence 11000 00000000 000000 0000000000000000000000 0000000 0000 000000
Q ss_pred CCCchHHHHHHHhhchhhHHHHHHHhhccCcCCC--CCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEE
Q 016533 283 SPEENNYMALARQQGEYESLHRDMMVGFGTWEFD--PLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYH 360 (388)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~ 360 (388)
... ................ ...... ..++...+++++||+|+|+|++|.++|++..+.+.+.+++++++
T Consensus 237 ~~~--------~~~~~~~~~l~~~~~~-~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~ 307 (339)
T PRK07581 237 FLP--------RDPNNLLAMLWTWQRG-DISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELR 307 (339)
T ss_pred hcc--------cCcccHHHHHHHhhhc-ccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEE
Confidence 000 0000000000000000 000000 01223346678899999999999999999999999999999999
Q ss_pred EeCC-CCCCcccC-CCchHHHHHHhhcC
Q 016533 361 ELSG-AGHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 361 ~i~~-~gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
++++ +||+.+.| ++.+.+.|.+||++
T Consensus 308 ~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 308 PIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred EeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 9998 99999999 99999999999863
No 25
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=6.4e-28 Score=212.94 Aligned_cols=267 Identities=17% Similarity=0.221 Sum_probs=162.0
Q ss_pred eEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCC
Q 016533 72 RIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGES 151 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 151 (388)
.++. +|.++.|...+.+ ..+++|||+||++++...|. .. +..++.+.||+|+++|+||||.|
T Consensus 6 ~~~~-~~~~~~~~~~~~~--~~~~~vl~~hG~~g~~~~~~---~~------------~~~~l~~~g~~vi~~d~~G~G~s 67 (288)
T TIGR01250 6 IITV-DGGYHLFTKTGGE--GEKIKLLLLHGGPGMSHEYL---EN------------LRELLKEEGREVIMYDQLGCGYS 67 (288)
T ss_pred eecC-CCCeEEEEeccCC--CCCCeEEEEcCCCCccHHHH---HH------------HHHHHHhcCCEEEEEcCCCCCCC
Confidence 3444 6777888887643 23689999999877666554 33 46666666899999999999999
Q ss_pred CCCC--C--CChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhH-H
Q 016533 152 DPNP--N--RTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSK-E 226 (388)
Q Consensus 152 ~~~~--~--~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~-~ 226 (388)
+.+. . ++++++++|+.+++++++. ++++++||||||.+++.++..+|++|+++|++++... .+..... .
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-----~~~~~~~~~ 141 (288)
T TIGR01250 68 DQPDDSDELWTIDYFVDELEEVREKLGL-DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS-----APEYVKELN 141 (288)
T ss_pred CCCCcccccccHHHHHHHHHHHHHHcCC-CcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc-----chHHHHHHH
Confidence 8542 2 6899999999999999998 6899999999999999999999999999999997532 1110000 0
Q ss_pred HHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcC------CCchHHHHHHHhhchhh
Q 016533 227 AYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWS------PEENNYMALARQQGEYE 300 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 300 (388)
........ .......... ....+.. .........+. .................
T Consensus 142 ~~~~~~~~-~~~~~~~~~~--------~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (288)
T TIGR01250 142 RLRKELPP-EVRAAIKRCE--------ASGDYDN------------PEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNT 200 (288)
T ss_pred HHHhhcCh-hHHHHHHHHH--------hccCcch------------HHHHHHHHHHHHHhhcccccchHHHHHHhhccCH
Confidence 00000000 0000000000 0000000 00000000000 00000000000000000
Q ss_pred HHHHHHHhhccCc----CCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCc
Q 016533 301 SLHRDMMVGFGTW----EFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGM 375 (388)
Q Consensus 301 ~~~~~~~~~~~~~----~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~ 375 (388)
.....+. ....+ .....++...+++++||+++++|++|.+ +++..+.+.+.++++++++++++||+++.| |++
T Consensus 201 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~ 278 (288)
T TIGR01250 201 NVYNIMQ-GPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEV 278 (288)
T ss_pred HHHhccc-CCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHH
Confidence 0000000 00000 0001122234567889999999999985 567888899999999999999999999999 999
Q ss_pred hHHHHHHhhc
Q 016533 376 SDTIVKAVLT 385 (388)
Q Consensus 376 ~~~~i~~fl~ 385 (388)
+.+.|.+||+
T Consensus 279 ~~~~i~~fl~ 288 (288)
T TIGR01250 279 YFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHhC
Confidence 9999999985
No 26
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=1.6e-28 Score=222.38 Aligned_cols=280 Identities=19% Similarity=0.232 Sum_probs=160.7
Q ss_pred CCcEEEEEEcCCCCCCCCceEEEEccCCCCCcc-----------ccccccCCCCCccccccCch---HHHHHHhCeEEEE
Q 016533 77 DGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHD-----------SAVANFLSPFMPILWCGGIY---QEVIEDLGVYIVS 142 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~---~~l~~~~g~~vi~ 142 (388)
+|.+|+|..+|+++...+++|||+||++++... |. .+ + ..+..+ +|+||+
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~---~~------------~~~~~~l~~~-~~~vi~ 77 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWD---DL------------IGPGRAIDTD-RYFVVC 77 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchh---hc------------cCCCCCcCCC-ceEEEE
Confidence 688999999997543446799999999997743 44 33 2 133333 799999
Q ss_pred eCCCC--cCCCCCC-------------CCCChhhHHHHHHHHHHHhCCCCc-EEEEEecccHHHHHHHHHhCCcccceeE
Q 016533 143 YDRAG--YGESDPN-------------PNRTVKSDALDIEELADQLGVGSK-FYVIGYSMGGHPIWGCLKYIPHRLAGAG 206 (388)
Q Consensus 143 ~D~~G--~G~S~~~-------------~~~~~~~~~~dl~~~l~~l~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~li 206 (388)
+|+|| ||.|.+. ..++++++++|+.++++++++ ++ ++++||||||.+++.+|.++|++|+++|
T Consensus 78 ~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lv 156 (351)
T TIGR01392 78 SNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI-EQIAAVVGGSMGGMQALEWAIDYPERVRAIV 156 (351)
T ss_pred ecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEE
Confidence 99999 5665431 136899999999999999999 67 9999999999999999999999999999
Q ss_pred eeccccccCCCCCCchh--hH----HHHhhcCC-------c---hhHHHHHHhhcchhhh--hhcccccccchhhhhccc
Q 016533 207 LLAPVVNYWWPGFPANL--SK----EAYYQQLP-------Q---DQWAVRVAHYIPWLTY--WWNTQKWFLPSAVIAHRM 268 (388)
Q Consensus 207 l~~~~~~~~~~~~~~~~--~~----~~~~~~~~-------~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 268 (388)
++++.... .... .. ........ . ................ .......|.........+
T Consensus 157 l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 231 (351)
T TIGR01392 157 VLATSARH-----SAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESP 231 (351)
T ss_pred EEccCCcC-----CHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCccccccc
Confidence 99986421 1100 00 00000000 0 0000000000000000 000000000000000000
Q ss_pred cc--cChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCC--CCCCCCCCCCCccEEEEecCCCCCCcH
Q 016533 269 DI--FSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDP--LDLKNPFPNNEGSVHLWHGDEDRLVPV 344 (388)
Q Consensus 269 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~i~~Pvlii~G~~D~~~p~ 344 (388)
.. ......+......... .........+......+ ..++... .++...+++|++|+|+|+|++|.++|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~l----~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~ 304 (351)
T TIGR01392 232 ASGFDTRFQVESYLRYQGDK---FVDRFDANSYLYLTRAL----DTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPP 304 (351)
T ss_pred ccccCccchHHHHHHHHHHH---HHhhcCcchHHHHHHHH----HhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCH
Confidence 00 0000000000000000 00000000000000011 1111100 122335667888999999999999999
Q ss_pred HHHHHHHHhCCCceEE-----EeCCCCCCcccC-CCchHHHHHHhhc
Q 016533 345 ILQRYIVQRLPWIHYH-----ELSGAGHMFPFT-DGMSDTIVKAVLT 385 (388)
Q Consensus 345 ~~~~~~~~~~~~~~~~-----~i~~~gH~~~~e-~~~~~~~i~~fl~ 385 (388)
+.++.+++.+++++++ +++++||++++| |+++++.|.+||+
T Consensus 305 ~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 305 AESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 9999999999988765 567899999999 9999999999984
No 27
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=7.8e-28 Score=199.52 Aligned_cols=272 Identities=16% Similarity=0.130 Sum_probs=179.3
Q ss_pred CccccCeEEcCCCcEEEEEEcCCCCC-CCCceEEEEccCCCCC-ccccccccCCCCCccccccCchHHHHHHhCeEEEEe
Q 016533 66 PAVTAPRIKLRDGRHLAYKEHGVPKD-NAKYKIFFVHGFDSCR-HDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSY 143 (388)
Q Consensus 66 ~~~~~~~~~~~~g~~l~y~~~g~~~~-~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 143 (388)
......+++..+|.++.+..|-+... +++..|+++||+++.. ..|. .+ ...+...||.|+++
T Consensus 25 ~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~---~~-------------a~~l~~~g~~v~a~ 88 (313)
T KOG1455|consen 25 VTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQ---ST-------------AKRLAKSGFAVYAI 88 (313)
T ss_pred cceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHH---HH-------------HHHHHhCCCeEEEe
Confidence 34556688888999999999976432 5577899999999876 4454 45 44445559999999
Q ss_pred CCCCcCCCCCCCCC--ChhhHHHHHHHHHHHhC-----CCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCC
Q 016533 144 DRAGYGESDPNPNR--TVKSDALDIEELADQLG-----VGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWW 216 (388)
Q Consensus 144 D~~G~G~S~~~~~~--~~~~~~~dl~~~l~~l~-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~ 216 (388)
|++|||.|++...| +++..++|+..+.+... .+.+.+++||||||.+++.++.++|+..+|+|+++|+.....
T Consensus 89 D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~ 168 (313)
T KOG1455|consen 89 DYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISE 168 (313)
T ss_pred eccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCC
Confidence 99999999976665 89999999999988652 236899999999999999999999999999999999876422
Q ss_pred CCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhh
Q 016533 217 PGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQ 296 (388)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (388)
...|...... ....+....|.+. ..+. .......-.+.+.......++..+.......
T Consensus 169 ~~kp~p~v~~----------~l~~l~~liP~wk-------~vp~-----~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~ 226 (313)
T KOG1455|consen 169 DTKPHPPVIS----------ILTLLSKLIPTWK-------IVPT-----KDIIDVAFKDPEKRKILRSDPLCYTGKPRLK 226 (313)
T ss_pred ccCCCcHHHH----------HHHHHHHhCCcee-------ecCC-----ccccccccCCHHHHHHhhcCCceecCCccHH
Confidence 2111111110 1111122222211 0000 0000011122222333333333222221211
Q ss_pred chhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC--CCceEEEeCCCCCCccc-C-
Q 016533 297 GEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL--PWIHYHELSGAGHMFPF-T- 372 (388)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~-e- 372 (388)
..++-+.... ++...++++++|.+++||++|.++.++.++.+++.. .+.++.+|||.-|.++. |
T Consensus 227 T~~ElLr~~~------------~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~ 294 (313)
T KOG1455|consen 227 TAYELLRVTA------------DLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEP 294 (313)
T ss_pred HHHHHHHHHH------------HHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCC
Confidence 2222121111 444567778888999999999999999999999998 47789999999999886 5
Q ss_pred CC---chHHHHHHhhcCC
Q 016533 373 DG---MSDTIVKAVLTGD 387 (388)
Q Consensus 373 ~~---~~~~~i~~fl~~~ 387 (388)
++ .+...|.+||+++
T Consensus 295 ~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 295 DENVEIVFGDIISWLDER 312 (313)
T ss_pred chhHHHHHHHHHHHHHhc
Confidence 43 3566677787653
No 28
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=2.8e-28 Score=209.99 Aligned_cols=236 Identities=15% Similarity=0.132 Sum_probs=146.1
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL 173 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 173 (388)
+|+|||+||++++...|. .+ ++.+ + +|+|+++|+||||.|+.+...+++++++|+.++++++
T Consensus 2 ~p~vvllHG~~~~~~~w~---~~------------~~~l-~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~ 63 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQ---PV------------GEAL-P--DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSY 63 (242)
T ss_pred CCEEEEECCCCCChHHHH---HH------------HHHc-C--CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHc
Confidence 578999999999999999 77 5654 3 5999999999999998766679999999999999999
Q ss_pred CCCCcEEEEEecccHHHHHHHHHhCCcc-cceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhh-cchhhhh
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCLKYIPHR-LAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHY-IPWLTYW 251 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 251 (388)
+. ++++++||||||.+++.+|.++|+. |++++++++... ....... .........|....... ...+...
T Consensus 64 ~~-~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (242)
T PRK11126 64 NI-LPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG-----LQNAEER--QARWQNDRQWAQRFRQEPLEQVLAD 135 (242)
T ss_pred CC-CCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCC-----CCCHHHH--HHHHhhhHHHHHHhccCcHHHHHHH
Confidence 98 7999999999999999999999765 999999987532 1111100 00000001111110000 0000000
Q ss_pred hcccccccchhhhhccccccChhhHHHH-hhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCcc
Q 016533 252 WNTQKWFLPSAVIAHRMDIFSRQDVEVL-SKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGS 330 (388)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~P 330 (388)
++....+ ..+........ ........ .....+..... . ....++...+.+++||
T Consensus 136 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-----~-~~~~~~~~~l~~i~~P 190 (242)
T PRK11126 136 WYQQPVF----------ASLNAEQRQQLVAKRSNNNG---------AAVAAMLEATS-----L-AKQPDLRPALQALTFP 190 (242)
T ss_pred HHhcchh----------hccCccHHHHHHHhcccCCH---------HHHHHHHHhcC-----c-ccCCcHHHHhhccCCC
Confidence 0000000 00111111110 00000000 00000000000 0 0001222345678889
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhcC
Q 016533 331 VHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 331 vlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
+++++|++|..+. .+.+. .++++++++++||+++.| |+++++.|.+|+++
T Consensus 191 ~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 191 FYYLCGERDSKFQ-----ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred eEEEEeCCcchHH-----HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 9999999998653 22333 378999999999999999 99999999999975
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=6e-28 Score=203.93 Aligned_cols=127 Identities=17% Similarity=0.210 Sum_probs=103.9
Q ss_pred cccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCC
Q 016533 68 VTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAG 147 (388)
Q Consensus 68 ~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G 147 (388)
.....+.+.++..+........ ...+.++|++||+|++...|. .- +..+.+ .+.|+++|++|
T Consensus 65 ~~~~~v~i~~~~~iw~~~~~~~-~~~~~plVliHGyGAg~g~f~---~N------------f~~La~--~~~vyaiDllG 126 (365)
T KOG4409|consen 65 YSKKYVRIPNGIEIWTITVSNE-SANKTPLVLIHGYGAGLGLFF---RN------------FDDLAK--IRNVYAIDLLG 126 (365)
T ss_pred cceeeeecCCCceeEEEeeccc-ccCCCcEEEEeccchhHHHHH---Hh------------hhhhhh--cCceEEecccC
Confidence 3444666666666655554332 255889999999999999887 55 578877 47999999999
Q ss_pred cCCCCCCC-----CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 148 YGESDPNP-----NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 148 ~G~S~~~~-----~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
+|+|+.+. ....+.+++-++++.+..++ ++.+|+|||+||+++..||.+||++|+.|||++|...
T Consensus 127 ~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L-~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf 196 (365)
T KOG4409|consen 127 FGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL-EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGF 196 (365)
T ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHHcCC-cceeEeeccchHHHHHHHHHhChHhhceEEEeccccc
Confidence 99998654 12456789999999999999 7999999999999999999999999999999999853
No 30
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=5.5e-28 Score=213.02 Aligned_cols=281 Identities=19% Similarity=0.206 Sum_probs=166.3
Q ss_pred ccCeEEcCCCc-EEEEEEcCCC------CCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEE
Q 016533 69 TAPRIKLRDGR-HLAYKEHGVP------KDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIV 141 (388)
Q Consensus 69 ~~~~~~~~~g~-~l~y~~~g~~------~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi 141 (388)
....++...|. .+.....+.. .+..+++||++||++++...|+ .+ +..+.++.|+.|+
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~---~~------------~~~L~~~~~~~v~ 90 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWR---RV------------VPLLSKAKGLRVL 90 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHh---hh------------ccccccccceEEE
Confidence 33445555553 4555545433 1235899999999999999999 87 6777776679999
Q ss_pred EeCCCCcCCCCC-C--CCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeE---eeccccccC
Q 016533 142 SYDRAGYGESDP-N--PNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAG---LLAPVVNYW 215 (388)
Q Consensus 142 ~~D~~G~G~S~~-~--~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~li---l~~~~~~~~ 215 (388)
++|++|+|.++. + ..|+..++++.+..++...+. ++++++|||+||.+|+.+|+.+|+.|++++ ++++...
T Consensus 91 aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~-~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~-- 167 (326)
T KOG1454|consen 91 AIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFV-EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVY-- 167 (326)
T ss_pred EEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcC-cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccc--
Confidence 999999995542 2 247999999999999999988 689999999999999999999999999999 5554422
Q ss_pred CCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccc-cccChhhHHHHhhcCCCchHHHHHHH
Q 016533 216 WPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRM-DIFSRQDVEVLSKWSPEENNYMALAR 294 (388)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (388)
............... .........+..... ....+.......... ........+..........
T Consensus 168 ----~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 232 (326)
T KOG1454|consen 168 ----STPKGIKGLRRLLDK--FLSALELLIPLSLTE--PVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPV------- 232 (326)
T ss_pred ----cCCcchhHHHHhhhh--hccHhhhcCcccccc--chhheeHhhhcceeeeccccccchhhhhhheeccc-------
Confidence 111111111000000 000000000000000 000000000000000 0000000000000000000
Q ss_pred hhchhhHHHHHHHhhccCc-CCCCCCCCCCCCCCC-ccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC
Q 016533 295 QQGEYESLHRDMMVGFGTW-EFDPLDLKNPFPNNE-GSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT 372 (388)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~i~-~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 372 (388)
.....++........ .........-++++. ||+|+++|++|.++|.+.++.+.+.+|++++++++++||.+++|
T Consensus 233 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e 308 (326)
T KOG1454|consen 233 ----KEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLE 308 (326)
T ss_pred ----ccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccC
Confidence 000000000000000 000001111234455 88999999999999999999999999999999999999999999
Q ss_pred -CCchHHHHHHhhcC
Q 016533 373 -DGMSDTIVKAVLTG 386 (388)
Q Consensus 373 -~~~~~~~i~~fl~~ 386 (388)
|+.+++.|..|+..
T Consensus 309 ~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 309 RPEEVAALLRSFIAR 323 (326)
T ss_pred CHHHHHHHHHHHHHH
Confidence 99999999999975
No 31
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.96 E-value=3e-27 Score=205.82 Aligned_cols=259 Identities=14% Similarity=0.124 Sum_probs=157.9
Q ss_pred CCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC
Q 016533 76 RDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP 155 (388)
Q Consensus 76 ~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~ 155 (388)
.+|.+++|..-. +.+|+|||+||++++...|. .+ ...| ++.||+|+++|+||||.|....
T Consensus 4 ~~~~~~~~~~~~----~~~p~vvliHG~~~~~~~w~---~~------------~~~L-~~~g~~vi~~dl~g~G~s~~~~ 63 (273)
T PLN02211 4 ENGEEVTDMKPN----RQPPHFVLIHGISGGSWCWY---KI------------RCLM-ENSGYKVTCIDLKSAGIDQSDA 63 (273)
T ss_pred cccccccccccc----CCCCeEEEECCCCCCcCcHH---HH------------HHHH-HhCCCEEEEecccCCCCCCCCc
Confidence 478888888621 23789999999999999998 77 4444 4448999999999999886433
Q ss_pred --CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCC
Q 016533 156 --NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLP 233 (388)
Q Consensus 156 --~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (388)
.++++++++++.++++.++..++++|+||||||.+++.++..+|++|+++|++++.... .+.. ....+.....
T Consensus 64 ~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~--~g~~---~~~~~~~~~~ 138 (273)
T PLN02211 64 DSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK--LGFQ---TDEDMKDGVP 138 (273)
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC--CCCC---HHHHHhcccc
Confidence 37999999999999999853379999999999999999999999999999999875310 0000 0000000000
Q ss_pred chhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhh-HHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccC
Q 016533 234 QDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQD-VEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGT 312 (388)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (388)
.+ ......... .. .... ............. ...+... .+.. .. ....... ....
T Consensus 139 --~~-~~~~~~~~~----~~---~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~---~~-------~~~~~~~-~~~~ 193 (273)
T PLN02211 139 --DL-SEFGDVYEL----GF---GLGP--DQPPTSAIIKKEFRRKILYQM--SPQE---DS-------TLAAMLL-RPGP 193 (273)
T ss_pred --ch-hhhccceee----ee---ccCC--CCCCceeeeCHHHHHHHHhcC--CCHH---HH-------HHHHHhc-CCcC
Confidence 00 000000000 00 0000 0000000000000 0000000 0000 00 0000000 0000
Q ss_pred c-CCCCCCCCCCCCCC-CccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhc
Q 016533 313 W-EFDPLDLKNPFPNN-EGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLT 385 (388)
Q Consensus 313 ~-~~~~~~~~~p~~~i-~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 385 (388)
. .+..........++ ++|+++|.|++|..+|++.++.+.+.+++++++.++ +||.++++ |+++.+.|.++..
T Consensus 194 ~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 194 ILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred ccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 0 00000111112234 678999999999999999999999999999999996 89999999 9999999998764
No 32
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.96 E-value=1.3e-27 Score=208.62 Aligned_cols=270 Identities=18% Similarity=0.175 Sum_probs=174.7
Q ss_pred ccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC
Q 016533 67 AVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA 146 (388)
Q Consensus 67 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 146 (388)
...+..+...||..++|..+..+. +++.+||++||++.+..-|. .+ +..+... ||.|+++|+|
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~-~~~g~Vvl~HG~~Eh~~ry~---~l------------a~~l~~~-G~~V~~~D~R 70 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE-PPKGVVVLVHGLGEHSGRYE---EL------------ADDLAAR-GFDVYALDLR 70 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC-CCCcEEEEecCchHHHHHHH---HH------------HHHHHhC-CCEEEEecCC
Confidence 345567777899999999996543 33489999999999999998 77 5666555 9999999999
Q ss_pred CcCCCC-CCCC--CChhhHHHHHHHHHHHhC---CCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCC
Q 016533 147 GYGESD-PNPN--RTVKSDALDIEELADQLG---VGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFP 220 (388)
Q Consensus 147 G~G~S~-~~~~--~~~~~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~ 220 (388)
|||.|. .... .++.++.+|+.++++... .+.+++++||||||.+++.++.+++.+|+++|+.+|......
T Consensus 71 GhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~---- 146 (298)
T COG2267 71 GHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG---- 146 (298)
T ss_pred CCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh----
Confidence 999997 3333 368999999999999874 347999999999999999999999999999999999864210
Q ss_pred chhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhh----ccccccChhhHHHHhhcCCCchHHHHHHHhh
Q 016533 221 ANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIA----HRMDIFSRQDVEVLSKWSPEENNYMALARQQ 296 (388)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (388)
.... ........... ..+.+...... .........+.+....+..++..... .
T Consensus 147 -~~~~-------------~~~~~~~~~~~-----~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~----~ 203 (298)
T COG2267 147 -AILR-------------LILARLALKLL-----GRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVG----G 203 (298)
T ss_pred -hHHH-------------HHHHHHhcccc-----cccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccC----C
Confidence 0000 00000000000 00100000000 01111112233333333333321000 0
Q ss_pred chhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCc-HHHHHHHHHhC--CCceEEEeCCCCCCcccC-
Q 016533 297 GEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVP-VILQRYIVQRL--PWIHYHELSGAGHMFPFT- 372 (388)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p-~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e- 372 (388)
.....+...+... . .....+..++++|+|+++|++|.+++ .+...++.+.. +++++++++|+.|.++.|
T Consensus 204 ~~~~w~~~~~~a~-~------~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~ 276 (298)
T COG2267 204 PVSRWVDLALLAG-R------VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEP 276 (298)
T ss_pred ccHHHHHHHHHhh-c------ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCc
Confidence 0000011111000 0 01222345677889999999999999 67777777665 678899999999999999
Q ss_pred -C--CchHHHHHHhhcCC
Q 016533 373 -D--GMSDTIVKAVLTGD 387 (388)
Q Consensus 373 -~--~~~~~~i~~fl~~~ 387 (388)
. +++.+.+.+|+.+.
T Consensus 277 ~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 277 DRAREEVLKDILAWLAEA 294 (298)
T ss_pred chHHHHHHHHHHHHHHhh
Confidence 4 67888888888653
No 33
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.96 E-value=1.8e-27 Score=211.51 Aligned_cols=123 Identities=24% Similarity=0.398 Sum_probs=102.0
Q ss_pred ccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc
Q 016533 69 TAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY 148 (388)
Q Consensus 69 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~ 148 (388)
.+.++...+|.+++|...|++. +++|||+||++++...+. + .......+|+|+++|+|||
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~---~~~lvllHG~~~~~~~~~----~-------------~~~~~~~~~~vi~~D~~G~ 64 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPD---GKPVVFLHGGPGSGTDPG----C-------------RRFFDPETYRIVLFDQRGC 64 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCC---CCEEEEECCCCCCCCCHH----H-------------HhccCccCCEEEEECCCCC
Confidence 3458888899999999988642 578999999887765543 1 2222233799999999999
Q ss_pred CCCCCCC---CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 149 GESDPNP---NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 149 G~S~~~~---~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
|.|+... .++.+++++|+..+++++++ ++++++||||||.+++.++.++|++|+++|++++..
T Consensus 65 G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~-~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 65 GKSTPHACLEENTTWDLVADIEKLREKLGI-KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 9998543 35788999999999999998 799999999999999999999999999999999764
No 34
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=5e-28 Score=220.61 Aligned_cols=298 Identities=19% Similarity=0.158 Sum_probs=161.9
Q ss_pred CCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCC-CCccccccCchH---HHHHHhCeEEEEeCCCCc-CCC
Q 016533 77 DGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSP-FMPILWCGGIYQ---EVIEDLGVYIVSYDRAGY-GES 151 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~l~~~~g~~vi~~D~~G~-G~S 151 (388)
+|.+++|..+|+++...+|+|||+||++++...|. .+.. ...+.||...+. .+..+ +|+||++|++|+ |.|
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~---~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAG---PHSPDDPKPGWWDNMVGPGKPIDTD-RYFVICSNVLGGCKGS 106 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcc---cccccCCCCcchhhccCCCCccCcc-ceEEEeccCCCCCCCC
Confidence 56788999999753334689999999999998643 1100 001111111121 23233 799999999983 444
Q ss_pred CC-C--------------CCCChhhHHHHHHHHHHHhCCCCc-EEEEEecccHHHHHHHHHhCCcccceeEeeccccccC
Q 016533 152 DP-N--------------PNRTVKSDALDIEELADQLGVGSK-FYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYW 215 (388)
Q Consensus 152 ~~-~--------------~~~~~~~~~~dl~~~l~~l~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~ 215 (388)
.. . +.++++++++++.++++++++ ++ ++++||||||.+++.+|.++|++|+++|++++.....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 185 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI-TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLS 185 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC-CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccC
Confidence 32 1 147899999999999999999 67 5999999999999999999999999999999764210
Q ss_pred CCCCCc-hhhHHHHhhcCC----------chh-HHHHHHhhcchhh--hhhcccccccchhhhhcc-ccccC-hhhHHHH
Q 016533 216 WPGFPA-NLSKEAYYQQLP----------QDQ-WAVRVAHYIPWLT--YWWNTQKWFLPSAVIAHR-MDIFS-RQDVEVL 279 (388)
Q Consensus 216 ~~~~~~-~~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~ 279 (388)
...... ............ ... ......+...... ........+......... ..... ......+
T Consensus 186 ~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l 265 (379)
T PRK00175 186 AQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYL 265 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHH
Confidence 000000 000000000000 000 0000000000000 000000000000000000 00000 0000000
Q ss_pred hhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCC---CCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCC
Q 016533 280 SKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDP---LDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPW 356 (388)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~ 356 (388)
..... . .........+....... ..++... .++...+.+|++|+|+|+|++|.++|++..+.+++.+++
T Consensus 266 ~~~~~-~---~~~~~d~~~~~~~~~~~----~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~ 337 (379)
T PRK00175 266 RYQGD-K---FVERFDANSYLYLTRAL----DYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLA 337 (379)
T ss_pred HHHHH-H---HhhccCchHHHHHHHHH----HhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHh
Confidence 00000 0 00000000000000000 0000000 122334567888899999999999999999999999988
Q ss_pred c----eEEEeC-CCCCCcccC-CCchHHHHHHhhcCC
Q 016533 357 I----HYHELS-GAGHMFPFT-DGMSDTIVKAVLTGD 387 (388)
Q Consensus 357 ~----~~~~i~-~~gH~~~~e-~~~~~~~i~~fl~~~ 387 (388)
+ ++++++ ++||++++| |+++++.|.+||++.
T Consensus 338 a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 338 AGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred cCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence 7 777775 899999999 999999999999753
No 35
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=5.4e-28 Score=208.13 Aligned_cols=239 Identities=17% Similarity=0.155 Sum_probs=147.2
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL 173 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 173 (388)
+++|||+||++++...|. .+ +..+.+ +|+|+++|+||||.|+....++++++++++.+.+
T Consensus 4 ~~~iv~~HG~~~~~~~~~---~~------------~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~--- 63 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFR---CL------------DEELSA--HFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA--- 63 (245)
T ss_pred CceEEEEcCCCCchhhHH---HH------------HHhhcc--CeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC---
Confidence 478999999999999998 77 555543 6999999999999998766677887777766543
Q ss_pred CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCC-CCchhhHHHHhhcCCchhHHHHHHhhcchhhhhh
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPG-FPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWW 252 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (388)
. ++++++||||||.+++.++.++|++++++|++++...+.... .+............. ............+
T Consensus 64 -~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---- 135 (245)
T TIGR01738 64 -P-DPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQ--QLSDDYQRTIERF---- 135 (245)
T ss_pred -C-CCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHH--HhhhhHHHHHHHH----
Confidence 2 689999999999999999999999999999998764321100 000000000000000 0000000000000
Q ss_pred cccccccchhhhhccccccChhhHHHHhh-cCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccE
Q 016533 253 NTQKWFLPSAVIAHRMDIFSRQDVEVLSK-WSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSV 331 (388)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pv 331 (388)
.....+ .............. +.... ......+...... . ...+....+.++++|+
T Consensus 136 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~-----~~~~~~~~l~~i~~Pv 191 (245)
T TIGR01738 136 LALQTL---------GTPTARQDARALKQTLLARP---------TPNVQVLQAGLEI-L-----ATVDLRQPLQNISVPF 191 (245)
T ss_pred HHHHHh---------cCCccchHHHHHHHHhhccC---------CCCHHHHHHHHHH-h-----hcccHHHHHhcCCCCE
Confidence 000000 00000000000000 00000 0000000000000 0 0002223455678889
Q ss_pred EEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhh
Q 016533 332 HLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVL 384 (388)
Q Consensus 332 lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl 384 (388)
++++|++|.++|++..+.+.+.++++++++++++||++++| |+++++.|.+|+
T Consensus 192 lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 192 LRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred EEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999 999999999986
No 36
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=3.3e-27 Score=214.14 Aligned_cols=262 Identities=17% Similarity=0.187 Sum_probs=163.0
Q ss_pred CeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCC
Q 016533 71 PRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGE 150 (388)
Q Consensus 71 ~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~ 150 (388)
..+...++..++|..|.+...+.+++||++||++++...|. .+ ...+.+ .||+|+++|+||||.
T Consensus 113 ~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~---~~------------a~~L~~-~Gy~V~~~D~rGhG~ 176 (395)
T PLN02652 113 SLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYL---HF------------AKQLTS-CGFGVYAMDWIGHGG 176 (395)
T ss_pred EEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHH---HH------------HHHHHH-CCCEEEEeCCCCCCC
Confidence 34455577788888887654456789999999999988888 77 566654 499999999999999
Q ss_pred CCCCCC--CChhhHHHHHHHHHHHhCC---CCcEEEEEecccHHHHHHHHHhCCc---ccceeEeeccccccCCCCCCch
Q 016533 151 SDPNPN--RTVKSDALDIEELADQLGV---GSKFYVIGYSMGGHPIWGCLKYIPH---RLAGAGLLAPVVNYWWPGFPAN 222 (388)
Q Consensus 151 S~~~~~--~~~~~~~~dl~~~l~~l~~---~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~ 222 (388)
|+.... .+++.+++|+.++++.+.. +.+++++||||||.+++.++. +|+ +|+++|+.+|..... +..
T Consensus 177 S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~----~~~ 251 (395)
T PLN02652 177 SDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVK----PAH 251 (395)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccc----cch
Confidence 986543 4788889999999998753 247999999999999998765 564 899999999874311 000
Q ss_pred hhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHH
Q 016533 223 LSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESL 302 (388)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (388)
.....+ ........+.+. +..... ...............+ .++......... .....+
T Consensus 252 ~~~~~~---------~~l~~~~~p~~~--------~~~~~~---~~~~~s~~~~~~~~~~-~dp~~~~g~i~~-~~~~~~ 309 (395)
T PLN02652 252 PIVGAV---------APIFSLVAPRFQ--------FKGANK---RGIPVSRDPAALLAKY-SDPLVYTGPIRV-RTGHEI 309 (395)
T ss_pred HHHHHH---------HHHHHHhCCCCc--------ccCccc---ccCCcCCCHHHHHHHh-cCCCcccCCchH-HHHHHH
Confidence 000000 000011111110 000000 0000010000111111 011000000000 000000
Q ss_pred HHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCC--CceEEEeCCCCCCcccC--CCchHH
Q 016533 303 HRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLP--WIHYHELSGAGHMFPFT--DGMSDT 378 (388)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e--~~~~~~ 378 (388)
.... . .+...++++++|+|+++|++|.++|++.++.+++.++ +.+++++++++|.++.| ++++.+
T Consensus 310 ~~~~----~-------~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~ 378 (395)
T PLN02652 310 LRIS----S-------YLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGR 378 (395)
T ss_pred HHHH----H-------HHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHH
Confidence 0000 0 1122355677889999999999999999999988864 47899999999999887 788999
Q ss_pred HHHHhhcC
Q 016533 379 IVKAVLTG 386 (388)
Q Consensus 379 ~i~~fl~~ 386 (388)
.|.+||.+
T Consensus 379 ~I~~FL~~ 386 (395)
T PLN02652 379 DIIDWMEK 386 (395)
T ss_pred HHHHHHHH
Confidence 99999974
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=2e-26 Score=210.79 Aligned_cols=121 Identities=15% Similarity=0.166 Sum_probs=94.7
Q ss_pred eEEcCCCc--EEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcC
Q 016533 72 RIKLRDGR--HLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYG 149 (388)
Q Consensus 72 ~~~~~~g~--~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G 149 (388)
.+...+|. ++++..+... ..+++|||+||++++...|. .. +..+.+ +|+|+++|+||||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~--~~~p~vvllHG~~~~~~~~~---~~------------~~~L~~--~~~vi~~D~rG~G 143 (402)
T PLN02894 83 WFRSASNEPRFINTVTFDSK--EDAPTLVMVHGYGASQGFFF---RN------------FDALAS--RFRVIAIDQLGWG 143 (402)
T ss_pred ceecccCcCCeEEEEEecCC--CCCCEEEEECCCCcchhHHH---HH------------HHHHHh--CCEEEEECCCCCC
Confidence 44444554 6776665432 34789999999999988887 66 566654 5999999999999
Q ss_pred CCCCCCC-C-C----hhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 150 ESDPNPN-R-T----VKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 150 ~S~~~~~-~-~----~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
.|+.+.. + + .+.+++++.++++.+++ ++++|+||||||.+++.+|.++|++|+++|+++|..
T Consensus 144 ~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~-~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 144 GSSRPDFTCKSTEETEAWFIDSFEEWRKAKNL-SNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred CCCCCCcccccHHHHHHHHHHHHHHHHHHcCC-CCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 9975432 1 1 12356778888888898 699999999999999999999999999999999864
No 38
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.95 E-value=1.9e-27 Score=202.12 Aligned_cols=221 Identities=23% Similarity=0.366 Sum_probs=143.2
Q ss_pred EEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC---CCChhhHHHHHHHHHHHh
Q 016533 97 IFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP---NRTVKSDALDIEELADQL 173 (388)
Q Consensus 97 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~dl~~~l~~l 173 (388)
|||+||++++...|. .+ +..+ + .||+|+++|+||||.|+... .++++++++|+.++++++
T Consensus 1 vv~~hG~~~~~~~~~---~~------------~~~l-~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~ 63 (228)
T PF12697_consen 1 VVFLHGFGGSSESWD---PL------------AEAL-A-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL 63 (228)
T ss_dssp EEEE-STTTTGGGGH---HH------------HHHH-H-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT
T ss_pred eEEECCCCCCHHHHH---HH------------HHHH-h-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc
Confidence 799999999999999 77 6666 4 48999999999999998654 468999999999999999
Q ss_pred CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhc
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWN 253 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (388)
+. ++++++|||+||.+++.++.++|++|+++|++++.... .......... ..................
T Consensus 64 ~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~-----~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 131 (228)
T PF12697_consen 64 GI-KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPL-----PDSPSRSFGP------SFIRRLLAWRSRSLRRLA 131 (228)
T ss_dssp TT-SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSH-----HHHHCHHHHH------HHHHHHHHHHHHHHHHHH
T ss_pred cc-ccccccccccccccccccccccccccccceeecccccc-----cccccccccc------hhhhhhhhcccccccccc
Confidence 99 79999999999999999999999999999999987431 0000000000 000000000000000000
Q ss_pred ccccccchhhhhccccccChhh-HHHHhhcCCCchHHHHHHHhhchhh--HHHHHHHhhccCcCCCCCCCCCCCCCCCcc
Q 016533 254 TQKWFLPSAVIAHRMDIFSRQD-VEVLSKWSPEENNYMALARQQGEYE--SLHRDMMVGFGTWEFDPLDLKNPFPNNEGS 330 (388)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~i~~P 330 (388)
...+ ........ .+.... . ......... ....+ +...++++++|
T Consensus 132 ~~~~----------~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~--------------~~~~~~~~~~p 178 (228)
T PF12697_consen 132 SRFF----------YRWFDGDEPEDLIRS----S-----RRALAEYLRSNLWQAD--------------LSEALPRIKVP 178 (228)
T ss_dssp HHHH----------HHHHTHHHHHHHHHH----H-----HHHHHHHHHHHHHHHH--------------HHHHHHGSSSE
T ss_pred cccc----------ccccccccccccccc----c-----cccccccccccccccc--------------ccccccccCCC
Confidence 0000 00000000 000000 0 000000000 00111 11123345667
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHH
Q 016533 331 VHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTI 379 (388)
Q Consensus 331 vlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~ 379 (388)
+++++|++|.+++.+..+.+.+.++++++++++++||++++| |+++++.
T Consensus 179 vl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 179 VLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred eEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 999999999999999999999999999999999999999999 9888763
No 39
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.95 E-value=2.1e-27 Score=183.69 Aligned_cols=251 Identities=18% Similarity=0.220 Sum_probs=169.3
Q ss_pred ccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCC-CccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC
Q 016533 67 AVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSC-RHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR 145 (388)
Q Consensus 67 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 145 (388)
..++..+.+ +|.+|+|..+|.+ ...||+++|.-++ ...|. +. +..+.+..-+.++++|.
T Consensus 20 ~~te~kv~v-ng~ql~y~~~G~G----~~~iLlipGalGs~~tDf~---pq------------l~~l~k~l~~TivawDP 79 (277)
T KOG2984|consen 20 DYTESKVHV-NGTQLGYCKYGHG----PNYILLIPGALGSYKTDFP---PQ------------LLSLFKPLQVTIVAWDP 79 (277)
T ss_pred hhhhheeee-cCceeeeeecCCC----CceeEecccccccccccCC---HH------------HHhcCCCCceEEEEECC
Confidence 345556665 8999999999975 4578888886654 45666 44 45555554589999999
Q ss_pred CCcCCCCCCCC-C---ChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCc
Q 016533 146 AGYGESDPNPN-R---TVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPA 221 (388)
Q Consensus 146 ~G~G~S~~~~~-~---~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~ 221 (388)
||+|.|.++.. + .+...+++...+++.|+. +++.++|+|-||..++..|+++++.|.++|+.++.... .
T Consensus 80 pGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~-~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayv------n 152 (277)
T KOG2984|consen 80 PGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKL-EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYV------N 152 (277)
T ss_pred CCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCC-CCeeEeeecCCCeEEEEeeccChhhhhhheeeccccee------c
Confidence 99999986553 2 345567778888999999 89999999999999999999999999999999976421 1
Q ss_pred hhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhH
Q 016533 222 NLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYES 301 (388)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (388)
......+........|..+... .. ......+.+...-.++.
T Consensus 153 ~~~~ma~kgiRdv~kWs~r~R~------------P~-----e~~Yg~e~f~~~wa~wv---------------------- 193 (277)
T KOG2984|consen 153 HLGAMAFKGIRDVNKWSARGRQ------------PY-----EDHYGPETFRTQWAAWV---------------------- 193 (277)
T ss_pred chhHHHHhchHHHhhhhhhhcc------------hH-----HHhcCHHHHHHHHHHHH----------------------
Confidence 1111111111111111110000 00 00000000000000000
Q ss_pred HHHHHHhhccCcCCCCCCC-CCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHH
Q 016533 302 LHRDMMVGFGTWEFDPLDL-KNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTI 379 (388)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~-~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~ 379 (388)
+...++. .+...++ +.-+++++||+||+||++|++++....-.+....+.+++.+.+.++|.+++. +++|++.
T Consensus 194 ---D~v~qf~--~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnkl 268 (277)
T KOG2984|consen 194 ---DVVDQFH--SFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKL 268 (277)
T ss_pred ---HHHHHHh--hcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHH
Confidence 0001111 1111122 2357889999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHhhcCCC
Q 016533 380 VKAVLTGDK 388 (388)
Q Consensus 380 i~~fl~~~~ 388 (388)
+.+||++.+
T Consensus 269 v~dFl~~~~ 277 (277)
T KOG2984|consen 269 VLDFLKSTE 277 (277)
T ss_pred HHHHHhccC
Confidence 999998764
No 40
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.94 E-value=3.9e-26 Score=197.02 Aligned_cols=244 Identities=21% Similarity=0.237 Sum_probs=150.8
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC---CCChhhHHHH-HHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP---NRTVKSDALD-IEEL 169 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~d-l~~~ 169 (388)
+++|||+||++++...|. .+ +..+. + ||+|+++|+||||.|+.+. .+++++.+++ +..+
T Consensus 1 ~~~vv~~hG~~~~~~~~~---~~------------~~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 63 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQ---AL------------IELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATL 63 (251)
T ss_pred CCEEEEEcCCCCchhhHH---HH------------HHHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHH
Confidence 368999999999999999 77 66665 3 8999999999999997543 3578888988 7888
Q ss_pred HHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhh-cchh
Q 016533 170 ADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHY-IPWL 248 (388)
Q Consensus 170 l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 248 (388)
++.++. ++++++|||+||.+++.+|.++|++|++++++++.... ........ .......+....... ...+
T Consensus 64 ~~~~~~-~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 135 (251)
T TIGR03695 64 LDQLGI-EPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGL-----ATEEERAA--RRQNDEQLAQRFEQEGLEAF 135 (251)
T ss_pred HHHcCC-CeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCc-----CchHhhhh--hhhcchhhhhHHHhcCccHH
Confidence 888887 79999999999999999999999999999999986431 11110000 000000011000000 0001
Q ss_pred hhhhcccccccchhhhhccccccChhhHH-HHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCC
Q 016533 249 TYWWNTQKWFLPSAVIAHRMDIFSRQDVE-VLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNN 327 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i 327 (388)
...+.....+.. .......... .......... ..+......... .....+...+.++
T Consensus 136 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~---~~~~~~~~~~~~~ 193 (251)
T TIGR03695 136 LDDWYQQPLFAS-------QKNLPPEQRQALRAKRLANNP------------EGLAKMLRATGL---GKQPSLWPKLQAL 193 (251)
T ss_pred HHHHhcCceeee-------cccCChHHhHHHHHhcccccc------------hHHHHHHHHhhh---hcccchHHHhhCC
Confidence 110111111100 0001111111 1110000000 000000000000 0000111234567
Q ss_pred CccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhc
Q 016533 328 EGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLT 385 (388)
Q Consensus 328 ~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 385 (388)
++|+++++|++|..++ +..+.+.+..+++++++++++||++++| |+++.+.|.+|++
T Consensus 194 ~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 194 TIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 8889999999998774 5677788888999999999999999999 9999999999984
No 41
>PLN02511 hydrolase
Probab=99.94 E-value=2.4e-26 Score=209.56 Aligned_cols=273 Identities=13% Similarity=0.127 Sum_probs=157.9
Q ss_pred ccccCeEEcCCCcEEEEEEcCC---CCCCCCceEEEEccCCCCCcc-ccccccCCCCCccccccCchHHHHHHhCeEEEE
Q 016533 67 AVTAPRIKLRDGRHLAYKEHGV---PKDNAKYKIFFVHGFDSCRHD-SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVS 142 (388)
Q Consensus 67 ~~~~~~~~~~~g~~l~y~~~g~---~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~ 142 (388)
.+++..+.+.||..+.+..... .....+|+||++||+++++.. |. ..+ +..+. +.||+|++
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~--~~~------------~~~~~-~~g~~vv~ 134 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYV--RHM------------LLRAR-SKGWRVVV 134 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHH--HHH------------HHHHH-HCCCEEEE
Confidence 4455678888999888754421 112347899999999887654 42 023 33444 44999999
Q ss_pred eCCCCcCCCCCCC-CCChhhHHHHHHHHHHHhCC---CCcEEEEEecccHHHHHHHHHhCCcc--cceeEeeccccccCC
Q 016533 143 YDRAGYGESDPNP-NRTVKSDALDIEELADQLGV---GSKFYVIGYSMGGHPIWGCLKYIPHR--LAGAGLLAPVVNYWW 216 (388)
Q Consensus 143 ~D~~G~G~S~~~~-~~~~~~~~~dl~~~l~~l~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lil~~~~~~~~~ 216 (388)
+|+||||.|.... ......+++|+.+++++++. +.+++++||||||.+++.++.++|++ |.+++++++..+.
T Consensus 135 ~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l-- 212 (388)
T PLN02511 135 FNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL-- 212 (388)
T ss_pred EecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH--
Confidence 9999999997432 23446778899888888754 24899999999999999999999987 8888888765321
Q ss_pred CCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHH--
Q 016533 217 PGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALAR-- 294 (388)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (388)
......+..... ..........+...... ....+.. ....+. ...+...............
T Consensus 213 -----~~~~~~~~~~~~-~~y~~~~~~~l~~~~~~--~~~~~~~------~~~~~~---~~~~~~~~~~~~fd~~~t~~~ 275 (388)
T PLN02511 213 -----VIADEDFHKGFN-NVYDKALAKALRKIFAK--HALLFEG------LGGEYN---IPLVANAKTVRDFDDGLTRVS 275 (388)
T ss_pred -----HHHHHHHhccHH-HHHHHHHHHHHHHHHHH--HHHHHhh------CCCccC---HHHHHhCCCHHHHHHhhhhhc
Confidence 001111111000 00000000000000000 0000000 000000 0000000000000000000
Q ss_pred -hhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHH-HHHHHhCCCceEEEeCCCCCCcccC
Q 016533 295 -QQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQ-RYIVQRLPWIHYHELSGAGHMFPFT 372 (388)
Q Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e 372 (388)
.......+.. ..+....+++|++|+|+|+|++|+++|.+.. ..+.+..+++++++++++||+.++|
T Consensus 276 ~gf~~~~~yy~------------~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E 343 (388)
T PLN02511 276 FGFKSVDAYYS------------NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVA 343 (388)
T ss_pred CCCCCHHHHHH------------HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceecccc
Confidence 0000011110 0122335677889999999999999998764 4566778999999999999999999
Q ss_pred -CCc------hHHHHHHhhc
Q 016533 373 -DGM------SDTIVKAVLT 385 (388)
Q Consensus 373 -~~~------~~~~i~~fl~ 385 (388)
|+. +.+.+.+||+
T Consensus 344 ~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 344 GPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred CCCCCCCCccHHHHHHHHHH
Confidence 765 5899999985
No 42
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.94 E-value=4.9e-26 Score=208.65 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=158.2
Q ss_pred CCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCC-C
Q 016533 77 DGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPN-P 155 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~ 155 (388)
++.+++|..+|++ .+++|||+||++++...|. .+ ...+.. +|+|+++|+||||.|... .
T Consensus 117 ~~~~i~~~~~g~~---~~~~vl~~HG~~~~~~~~~---~~------------~~~l~~--~~~v~~~d~~g~G~s~~~~~ 176 (371)
T PRK14875 117 GGRTVRYLRLGEG---DGTPVVLIHGFGGDLNNWL---FN------------HAALAA--GRPVIALDLPGHGASSKAVG 176 (371)
T ss_pred cCcEEEEecccCC---CCCeEEEECCCCCccchHH---HH------------HHHHhc--CCEEEEEcCCCCCCCCCCCC
Confidence 6778999888763 3689999999999999998 77 555544 599999999999999643 4
Q ss_pred CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCch
Q 016533 156 NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQD 235 (388)
Q Consensus 156 ~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (388)
..+++++++++.++++.++. ++++++|||+||.+++.+|..+|++++++|++++..... ..... ....+.......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~--~~~~~-~~~~~~~~~~~~ 252 (371)
T PRK14875 177 AGSLDELAAAVLAFLDALGI-ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGP--EINGD-YIDGFVAAESRR 252 (371)
T ss_pred CCCHHHHHHHHHHHHHhcCC-ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCc--ccchh-HHHHhhcccchh
Confidence 56899999999999999998 699999999999999999999999999999999763210 00000 000000000000
Q ss_pred hHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCC
Q 016533 236 QWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEF 315 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (388)
........ .+. ....+................. ......+..... .. ..
T Consensus 253 ~~~~~~~~-------------~~~-------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~-~~ 301 (371)
T PRK14875 253 ELKPVLEL-------------LFA-------DPALVTRQMVEDLLKYKRLDGV-------DDALRALADALF---AG-GR 301 (371)
T ss_pred HHHHHHHH-------------Hhc-------ChhhCCHHHHHHHHHHhccccH-------HHHHHHHHHHhc---cC-cc
Confidence 00000000 000 0000000000000000000000 000000000000 00 00
Q ss_pred CCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhcC
Q 016533 316 DPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 316 ~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
...+....+.+++||+++++|++|.++|++..+.+ .+++++.+++++||+++++ |+++.+.|.+||++
T Consensus 302 ~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 302 QRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred cchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 00111223456778899999999999998876544 3468999999999999999 99999999999975
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.93 E-value=4.6e-25 Score=214.27 Aligned_cols=276 Identities=15% Similarity=0.119 Sum_probs=159.2
Q ss_pred eEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCC
Q 016533 72 RIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGES 151 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 151 (388)
++...+|.+|+|+.+|++ .+++|||+||++++...|. .+ +..+ .+ +|+|+++|+||||.|
T Consensus 6 ~~~~~~g~~l~~~~~g~~---~~~~ivllHG~~~~~~~w~---~~------------~~~L-~~-~~~Vi~~D~~G~G~S 65 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDP---DRPTVVLVHGYPDNHEVWD---GV------------APLL-AD-RFRVVAYDVRGAGRS 65 (582)
T ss_pred EEEeeCCEEEEEEEcCCC---CCCeEEEEcCCCchHHHHH---HH------------HHHh-hc-ceEEEEecCCCCCCC
Confidence 444568999999999864 3789999999999999999 77 5666 43 799999999999999
Q ss_pred CCCC---CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh--CCcccceeEeeccccccCCCCCCchhhHH
Q 016533 152 DPNP---NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKY--IPHRLAGAGLLAPVVNYWWPGFPANLSKE 226 (388)
Q Consensus 152 ~~~~---~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lil~~~~~~~~~~~~~~~~~~~ 226 (388)
+... .++++++++|+.+++++++.+++++|+||||||.+++.++.. +++++..++.+++... .. ...
T Consensus 66 ~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~-------~~-~~~ 137 (582)
T PRK05855 66 SAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSL-------DH-VGF 137 (582)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCch-------HH-HHH
Confidence 8533 478999999999999999874459999999999999988876 2345555544443210 00 000
Q ss_pred HHhhcC---CchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHh-hchhhHH
Q 016533 227 AYYQQL---PQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQ-QGEYESL 302 (388)
Q Consensus 227 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 302 (388)
...... .........................+........ ......................... .......
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (582)
T PRK05855 138 WLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLG----LGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGV 213 (582)
T ss_pred HHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccc----hhhHHHHhhhhccCCCcchhhhhhhhccccchH
Confidence 000000 0000000000000000000000000000000000 0000000000000000000000000 0000000
Q ss_pred HHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHH
Q 016533 303 HRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVK 381 (388)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~ 381 (388)
. ..... ............+++|+++|+|++|.++|++..+.+.+.+++.++++++ +||+++.| |+.+.+.|.
T Consensus 214 ~-~~~~~-----~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~ 286 (582)
T PRK05855 214 K-LYRAN-----MIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVA 286 (582)
T ss_pred H-HHHhh-----hhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHH
Confidence 0 00000 0000111224457888999999999999999999999888988888886 69999999 999999999
Q ss_pred HhhcC
Q 016533 382 AVLTG 386 (388)
Q Consensus 382 ~fl~~ 386 (388)
+|+..
T Consensus 287 ~fl~~ 291 (582)
T PRK05855 287 EFVDA 291 (582)
T ss_pred HHHHh
Confidence 99974
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.93 E-value=1.4e-24 Score=194.08 Aligned_cols=277 Identities=15% Similarity=0.121 Sum_probs=155.6
Q ss_pred EEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCcc-cccccc-----------CCCCCccccccCchHHHHHHhCeEE
Q 016533 73 IKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHD-SAVANF-----------LSPFMPILWCGGIYQEVIEDLGVYI 140 (388)
Q Consensus 73 ~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~g~~v 140 (388)
+...||.+|+++.|.+. +++.+||++||+++.... +. ... +.+.-++.+... +...+.+.||+|
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~-~~~~~~~~~~~~~~~~~~ry~~y~~~-~~~~l~~~G~~V 77 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFL-KINAKIVNNDRAVLIDTDNYYIYKDS-WIENFNKNGYSV 77 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhh-hcCcccCCCCeeEEEcCCcceEeeHH-HHHHHHHCCCcE
Confidence 34568999999988653 457899999999988852 10 000 000000000000 234444559999
Q ss_pred EEeCCCCcCCCCCC---CC--CChhhHHHHHHHHHHHhC----------------------C-CCcEEEEEecccHHHHH
Q 016533 141 VSYDRAGYGESDPN---PN--RTVKSDALDIEELADQLG----------------------V-GSKFYVIGYSMGGHPIW 192 (388)
Q Consensus 141 i~~D~~G~G~S~~~---~~--~~~~~~~~dl~~~l~~l~----------------------~-~~~~~lvGhS~Gg~ia~ 192 (388)
+++|+||||.|+.. .. .+++++++|+..+++.+. . +.+++|+||||||.+++
T Consensus 78 ~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~ 157 (332)
T TIGR01607 78 YGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIAL 157 (332)
T ss_pred EEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHH
Confidence 99999999999853 22 378999999999988642 1 35899999999999999
Q ss_pred HHHHhCCc--------ccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhh
Q 016533 193 GCLKYIPH--------RLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVI 264 (388)
Q Consensus 193 ~~a~~~p~--------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (388)
.++..+++ .++++|+++|+........+.......+.. .....+....+.+.. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~-----~l~~~~~~~~p~~~~--------~~---- 220 (332)
T TIGR01607 158 RLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYL-----PVMNFMSRVFPTFRI--------SK---- 220 (332)
T ss_pred HHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHH-----HHHHHHHHHCCcccc--------cC----
Confidence 99976543 589999999875321100000000000000 000001111111110 00
Q ss_pred hccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCC--CccEEEEecCCCCCC
Q 016533 265 AHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNN--EGSVHLWHGDEDRLV 342 (388)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i--~~Pvlii~G~~D~~~ 342 (388)
...++. +......+..++...... ........+...... +.....++ ++|+|+++|++|.++
T Consensus 221 ---~~~~~~-~~~~~~~~~~Dp~~~~~~-~s~~~~~~l~~~~~~-----------~~~~~~~i~~~~P~Lii~G~~D~vv 284 (332)
T TIGR01607 221 ---KIRYEK-SPYVNDIIKFDKFRYDGG-ITFNLASELIKATDT-----------LDCDIDYIPKDIPILFIHSKGDCVC 284 (332)
T ss_pred ---cccccc-ChhhhhHHhcCccccCCc-ccHHHHHHHHHHHHH-----------HHhhHhhCCCCCCEEEEEeCCCCcc
Confidence 000000 001111111111100000 000111111111100 00011222 567999999999999
Q ss_pred cHHHHHHHHHhC--CCceEEEeCCCCCCcccC--CCchHHHHHHhhcC
Q 016533 343 PVILQRYIVQRL--PWIHYHELSGAGHMFPFT--DGMSDTIVKAVLTG 386 (388)
Q Consensus 343 p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~~ 386 (388)
+++.++.+++.. ++.+++++++++|.++.| .+++.+.|.+||.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 285 SYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred CHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 999999988776 578999999999999998 57899999999863
No 45
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.93 E-value=7.4e-25 Score=229.49 Aligned_cols=257 Identities=15% Similarity=0.160 Sum_probs=156.7
Q ss_pred EEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC-----
Q 016533 81 LAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP----- 155 (388)
Q Consensus 81 l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~----- 155 (388)
++|+..|.. +.+++|||+||++++...|. .+ +..+.+ +|+|+++|+||||.|+...
T Consensus 1360 i~~~~~G~~--~~~~~vVllHG~~~s~~~w~---~~------------~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~~~ 1420 (1655)
T PLN02980 1360 IKVHEVGQN--AEGSVVLFLHGFLGTGEDWI---PI------------MKAISG--SARCISIDLPGHGGSKIQNHAKET 1420 (1655)
T ss_pred EEEEecCCC--CCCCeEEEECCCCCCHHHHH---HH------------HHHHhC--CCEEEEEcCCCCCCCCCccccccc
Confidence 445555542 34689999999999999998 77 566644 5999999999999997432
Q ss_pred ----CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhc
Q 016533 156 ----NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQ 231 (388)
Q Consensus 156 ----~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 231 (388)
.++++++++++.+++++++. ++++|+||||||.+++.++.++|++|+++|++++... ....... .....
T Consensus 1421 ~~~~~~si~~~a~~l~~ll~~l~~-~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~-----~~~~~~~-~~~~~ 1493 (1655)
T PLN02980 1421 QTEPTLSVELVADLLYKLIEHITP-GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPG-----LKDEVAR-KIRSA 1493 (1655)
T ss_pred cccccCCHHHHHHHHHHHHHHhCC-CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCc-----cCchHHH-HHHhh
Confidence 46889999999999999998 7999999999999999999999999999999987532 1111100 00000
Q ss_pred CCchhHHHHHHh-hcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhc
Q 016533 232 LPQDQWAVRVAH-YIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGF 310 (388)
Q Consensus 232 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
. .......... ....+.. .++........ . ......+........... ............
T Consensus 1494 ~-~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~-- 1554 (1655)
T PLN02980 1494 K-DDSRARMLIDHGLEIFLE-----NWYSGELWKSL--R-NHPHFNKIVASRLLHKDV--------PSLAKLLSDLSI-- 1554 (1655)
T ss_pred h-hhHHHHHHHhhhHHHHHH-----HhccHHHhhhh--c-cCHHHHHHHHHHHhcCCH--------HHHHHHHHHhhh--
Confidence 0 0000000000 0000000 11110000000 0 000000000000000000 000000000000
Q ss_pred cCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCC------------ceEEEeCCCCCCcccC-CCchH
Q 016533 311 GTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPW------------IHYHELSGAGHMFPFT-DGMSD 377 (388)
Q Consensus 311 ~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~------------~~~~~i~~~gH~~~~e-~~~~~ 377 (388)
....++...++++++|+|+|+|++|..++ +.++++.+.+++ +++++++++||++++| |+.++
T Consensus 1555 ----~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~ 1629 (1655)
T PLN02980 1555 ----GRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVI 1629 (1655)
T ss_pred ----cccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHH
Confidence 00002223466778889999999999875 666777777765 4899999999999999 99999
Q ss_pred HHHHHhhcCC
Q 016533 378 TIVKAVLTGD 387 (388)
Q Consensus 378 ~~i~~fl~~~ 387 (388)
+.|.+||++.
T Consensus 1630 ~~I~~FL~~~ 1639 (1655)
T PLN02980 1630 RALRKFLTRL 1639 (1655)
T ss_pred HHHHHHHHhc
Confidence 9999999753
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=1.2e-24 Score=196.53 Aligned_cols=294 Identities=15% Similarity=0.145 Sum_probs=165.5
Q ss_pred CCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCC-CCccccccCchH--HHHHHhCeEEEEeCCCCcCCCCC
Q 016533 77 DGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSP-FMPILWCGGIYQ--EVIEDLGVYIVSYDRAGYGESDP 153 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~l~~~~g~~vi~~D~~G~G~S~~ 153 (388)
...+|+|+.+|.......++||++|++.++++.-. ...+ .....||..++. ..++...|.||++|..|-|.|..
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~---~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~ 115 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAG---KYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKD 115 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcc---cccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCC
Confidence 45689999999876556789999999999765421 1100 112234222222 22233359999999998765211
Q ss_pred ----------------------CCCCChhhHHHHHHHHHHHhCCCCcEE-EEEecccHHHHHHHHHhCCcccceeEeecc
Q 016533 154 ----------------------NPNRTVKSDALDIEELADQLGVGSKFY-VIGYSMGGHPIWGCLKYIPHRLAGAGLLAP 210 (388)
Q Consensus 154 ----------------------~~~~~~~~~~~dl~~~l~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 210 (388)
-+.++++++++++..+++++++ +++. ++||||||++++++|.+||++|+++|++++
T Consensus 116 p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi-~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 116 PNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGI-ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred CCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 1125899999999999999999 6886 999999999999999999999999999987
Q ss_pred ccccCCCCCCchh---hHHHHhhcC-CchhH-----------HHHHHhhcchhhhhhcccccccchhhhh----ccc--c
Q 016533 211 VVNYWWPGFPANL---SKEAYYQQL-PQDQW-----------AVRVAHYIPWLTYWWNTQKWFLPSAVIA----HRM--D 269 (388)
Q Consensus 211 ~~~~~~~~~~~~~---~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~ 269 (388)
... ..... ..+.....+ ....| ...................++....... ... .
T Consensus 195 ~~~-----~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~ 269 (389)
T PRK06765 195 NPQ-----NDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEK 269 (389)
T ss_pred CCC-----CChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCcccccccccc
Confidence 632 11110 011011100 00000 0000000000000000111110000000 000 0
Q ss_pred ccChhhH-HHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCC--CCCCCCCCCCCCCccEEEEecCCCCCCcHHH
Q 016533 270 IFSRQDV-EVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEF--DPLDLKNPFPNNEGSVHLWHGDEDRLVPVIL 346 (388)
Q Consensus 270 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~ 346 (388)
....... ..+...... .........+..+...+. .++. ...++...+.++++|+|+|+|++|.++|++.
T Consensus 270 ~~~~~~~e~yl~~~~~~----~~~~~Dan~~l~l~~a~~----~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~ 341 (389)
T PRK06765 270 VSTLTSFEKEINKATYR----RAELVDANHWLYLAKAVQ----LFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRY 341 (389)
T ss_pred ccchhhHHHHHHHHHHH----hhhccChhhHHHHHHHHH----hcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHH
Confidence 0000000 000000000 000000001111111110 1110 0012334566788899999999999999999
Q ss_pred HHHHHHhCC----CceEEEeCC-CCCCcccC-CCchHHHHHHhhcCC
Q 016533 347 QRYIVQRLP----WIHYHELSG-AGHMFPFT-DGMSDTIVKAVLTGD 387 (388)
Q Consensus 347 ~~~~~~~~~----~~~~~~i~~-~gH~~~~e-~~~~~~~i~~fl~~~ 387 (388)
.+.+.+.++ +++++++++ +||+.++| |+++++.|.+||+++
T Consensus 342 ~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 342 NYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNRK 388 (389)
T ss_pred HHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHccc
Confidence 999999886 689999985 89999999 999999999999865
No 47
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=5.6e-24 Score=167.94 Aligned_cols=221 Identities=17% Similarity=0.194 Sum_probs=150.4
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCC-CCCCChhhHHHHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDP-NPNRTVKSDALDIEELADQ 172 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~-~~~~~~~~~~~dl~~~l~~ 172 (388)
+..|||+||+.|+..... .+ .+.+++.||.|.++.+||||.... --..+.++|.+|+.+..++
T Consensus 15 ~~AVLllHGFTGt~~Dvr---~L-------------gr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~ 78 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVR---ML-------------GRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRD 78 (243)
T ss_pred CEEEEEEeccCCCcHHHH---HH-------------HHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHH
Confidence 468999999999999998 77 666677799999999999998752 2256899999999888777
Q ss_pred h---CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhh
Q 016533 173 L---GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLT 249 (388)
Q Consensus 173 l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (388)
| +. +.|.++|.||||.+++.+|..+| ++++|.+++..... ......+.+ ..+...
T Consensus 79 L~~~gy-~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k----~~~~iie~~-------------l~y~~~-- 136 (243)
T COG1647 79 LKEAGY-DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVK----SWRIIIEGL-------------LEYFRN-- 136 (243)
T ss_pred HHHcCC-CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccc----cchhhhHHH-------------HHHHHH--
Confidence 6 45 79999999999999999999998 89999999875410 000000000 000000
Q ss_pred hhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCc
Q 016533 250 YWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEG 329 (388)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~ 329 (388)
.......-.+...+.+..+...+.. ....+..+.. .+...+..|..
T Consensus 137 --------------~kk~e~k~~e~~~~e~~~~~~~~~~------~~~~~~~~i~--------------~~~~~~~~I~~ 182 (243)
T COG1647 137 --------------AKKYEGKDQEQIDKEMKSYKDTPMT------TTAQLKKLIK--------------DARRSLDKIYS 182 (243)
T ss_pred --------------hhhccCCCHHHHHHHHHHhhcchHH------HHHHHHHHHH--------------HHHhhhhhccc
Confidence 0000000111111122222111110 0001111111 12223455666
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHhC--CCceEEEeCCCCCCcccC--CCchHHHHHHhhcC
Q 016533 330 SVHLWHGDEDRLVPVILQRYIVQRL--PWIHYHELSGAGHMFPFT--DGMSDTIVKAVLTG 386 (388)
Q Consensus 330 Pvlii~G~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~~ 386 (388)
|++++.|++|+++|.+.+..+++.. .+.++.+++++||.+..+ .+++.+.|..||++
T Consensus 183 pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 183 PTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred chhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 7999999999999999999999987 356899999999999988 88899999999974
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.92 E-value=2.1e-23 Score=190.95 Aligned_cols=239 Identities=12% Similarity=0.063 Sum_probs=148.4
Q ss_pred ccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCC-ccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC
Q 016533 67 AVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCR-HDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR 145 (388)
Q Consensus 67 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 145 (388)
+++...+...+|..|..+.+.+..+++.|+||++||+.+.. ..|. .+ ...+ .+.||.|+++|+
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~---~~------------~~~L-a~~Gy~vl~~D~ 230 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYR---LF------------RDYL-APRGIAMLTIDM 230 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHH---HH------------HHHH-HhCCCEEEEECC
Confidence 45666777778867877666443334467777777777654 4455 44 3444 455999999999
Q ss_pred CCcCCCCCCC-CCChhhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCc
Q 016533 146 AGYGESDPNP-NRTVKSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPA 221 (388)
Q Consensus 146 ~G~G~S~~~~-~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~ 221 (388)
||+|.|.... ..+.....+++.+++... +. +++.++||||||.+++.+|..+|++|+++|++++..... +..
T Consensus 231 pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~-~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~---~~~ 306 (414)
T PRK05077 231 PSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDH-TRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTL---LTD 306 (414)
T ss_pred CCCCCCCCCCccccHHHHHHHHHHHHHhCcccCc-ccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchh---hcc
Confidence 9999996532 223444445555555544 44 699999999999999999999999999999999874310 000
Q ss_pred hhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhH
Q 016533 222 NLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYES 301 (388)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (388)
...+. ..+......+... + .......+.+..
T Consensus 307 ---~~~~~--------------~~p~~~~~~la~~-l-----------g~~~~~~~~l~~-------------------- 337 (414)
T PRK05077 307 ---PKRQQ--------------QVPEMYLDVLASR-L-----------GMHDASDEALRV-------------------- 337 (414)
T ss_pred ---hhhhh--------------hchHHHHHHHHHH-h-----------CCCCCChHHHHH--------------------
Confidence 00000 0000000000000 0 000000000000
Q ss_pred HHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHH
Q 016533 302 LHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIV 380 (388)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i 380 (388)
.+ ..+......+. ..++++|+|+|+|++|+++|++.++.+.+..++.++++++++ ++.+ ++++.+.+
T Consensus 338 ---~l----~~~sl~~~~~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i 405 (414)
T PRK05077 338 ---EL----NRYSLKVQGLL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEI 405 (414)
T ss_pred ---Hh----hhccchhhhhh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHH
Confidence 00 00000000000 135778899999999999999999999999999999999986 4556 89999999
Q ss_pred HHhhcC
Q 016533 381 KAVLTG 386 (388)
Q Consensus 381 ~~fl~~ 386 (388)
.+||++
T Consensus 406 ~~wL~~ 411 (414)
T PRK05077 406 SDWLED 411 (414)
T ss_pred HHHHHH
Confidence 999975
No 49
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.92 E-value=1.8e-23 Score=176.72 Aligned_cols=253 Identities=16% Similarity=0.105 Sum_probs=162.6
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQ 172 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~ 172 (388)
..|+++++||+.++...|. .+ ...+..+.+..|+++|.|.||.|.....++.+++++|+..+++.
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~---sv------------~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~ 115 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWR---SV------------AKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDG 115 (315)
T ss_pred CCCceEEecccccCCCCHH---HH------------HHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHH
Confidence 4789999999999999999 88 78888888899999999999999988888999999999999998
Q ss_pred hC---CCCcEEEEEecccH-HHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhH---HHHHHhhc
Q 016533 173 LG---VGSKFYVIGYSMGG-HPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQW---AVRVAHYI 245 (388)
Q Consensus 173 l~---~~~~~~lvGhS~Gg-~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 245 (388)
.+ ...+++++|||||| .+++..+..+|+.+..+|+++-... ..+.......+.+......+.. ........
T Consensus 116 v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~--~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~ 193 (315)
T KOG2382|consen 116 VGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPG--GVGRSYGEYRELIKAMIQLDLSIGVSRGRKEAL 193 (315)
T ss_pred cccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCc--cCCcccchHHHHHHHHHhccccccccccHHHHH
Confidence 84 12699999999999 7888888899999999999986532 1111222222222222211111 00000000
Q ss_pred chhhhhhcccccccchhhhhccccccChhhHHHHhhcCC-CchH-HHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCC
Q 016533 246 PWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSP-EENN-YMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNP 323 (388)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 323 (388)
+.+.. ...+......+..... .... .............+...+. ....| .+..+
T Consensus 194 ~~l~~------------------~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~-~~s~~-~~l~~---- 249 (315)
T KOG2382|consen 194 KSLIE------------------VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE-ILSYW-ADLED---- 249 (315)
T ss_pred HHHHH------------------HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH-hhccc-ccccc----
Confidence 10000 0000000000000000 0000 0000000000111111111 11111 11111
Q ss_pred CCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhcCC
Q 016533 324 FPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLTGD 387 (388)
Q Consensus 324 ~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 387 (388)
.....||+++.|.++..++.+.-..+.+.+|++++++++++||+++.| |+.+.+.|.+|+...
T Consensus 250 -~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 250 -GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred -cccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 234566999999999999999999999999999999999999999999 999999999999754
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.92 E-value=5e-23 Score=184.11 Aligned_cols=272 Identities=12% Similarity=0.072 Sum_probs=146.4
Q ss_pred ccCeEEcCCCcEEEEEEcCCC-CCCCCceEEEEccCCCCCcc-ccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC
Q 016533 69 TAPRIKLRDGRHLAYKEHGVP-KDNAKYKIFFVHGFDSCRHD-SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA 146 (388)
Q Consensus 69 ~~~~~~~~~g~~l~y~~~g~~-~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 146 (388)
....+++.||..+.+.....+ ....+|+||++||++++... |. ..+ +..+ .+.||+|+++|+|
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~--~~~------------~~~l-~~~G~~v~~~d~r 96 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYA--HGL------------LEAA-QKRGWLGVVMHFR 96 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHH--HHH------------HHHH-HHCCCEEEEEeCC
Confidence 344688889987766543222 22347899999999987554 22 034 3444 4559999999999
Q ss_pred CcCCCCCC-CCCChhhHHHHHHHHHH----HhCCCCcEEEEEecccHHHHHHHHHhCCcc--cceeEeeccccccCCCCC
Q 016533 147 GYGESDPN-PNRTVKSDALDIEELAD----QLGVGSKFYVIGYSMGGHPIWGCLKYIPHR--LAGAGLLAPVVNYWWPGF 219 (388)
Q Consensus 147 G~G~S~~~-~~~~~~~~~~dl~~~l~----~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lil~~~~~~~~~~~~ 219 (388)
|||.+... .........+|+..+++ .++. .+++++||||||.+++.++..+++. ++++|++++..+.
T Consensus 97 G~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~----- 170 (324)
T PRK10985 97 GCSGEPNRLHRIYHSGETEDARFFLRWLQREFGH-VPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML----- 170 (324)
T ss_pred CCCCCccCCcceECCCchHHHHHHHHHHHHhCCC-CCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH-----
Confidence 99977532 11111123455554443 3455 6899999999999988888877654 8999999976421
Q ss_pred CchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchh
Q 016533 220 PANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEY 299 (388)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (388)
......+..... ......+........... ...+. ... ..+.+.+...................+
T Consensus 171 --~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~-~~~~~----------~~~-~~~~~~~~~~~~~~~fd~~~~~~~~g~ 235 (324)
T PRK10985 171 --EACSYRMEQGFS-RVYQRYLLNLLKANAARK-LAAYP----------GTL-PINLAQLKSVRRLREFDDLITARIHGF 235 (324)
T ss_pred --HHHHHHHhhhHH-HHHHHHHHHHHHHHHHHH-HHhcc----------ccc-cCCHHHHhcCCcHHHHhhhheeccCCC
Confidence 000000100000 000000000000000000 00000 000 001111111000000000000000001
Q ss_pred hHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-C-----
Q 016533 300 ESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-D----- 373 (388)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~----- 373 (388)
......+.. .+....++++++|+++|+|++|++++++..+.+.+..+++++++++++||+.+.| .
T Consensus 236 ~~~~~~y~~---------~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~ 306 (324)
T PRK10985 236 ADAIDYYRQ---------CSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQ 306 (324)
T ss_pred CCHHHHHHH---------CChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCC
Confidence 111111100 0122335677888999999999999998888887778899999999999999987 3
Q ss_pred CchHHHHHHhhc
Q 016533 374 GMSDTIVKAVLT 385 (388)
Q Consensus 374 ~~~~~~i~~fl~ 385 (388)
....+.+.+|++
T Consensus 307 ~w~~~~~~~~~~ 318 (324)
T PRK10985 307 MWLEQRIPDWLT 318 (324)
T ss_pred ccHHHHHHHHHH
Confidence 357778888875
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=99.91 E-value=7.7e-23 Score=175.15 Aligned_cols=126 Identities=21% Similarity=0.202 Sum_probs=95.8
Q ss_pred ccCeEEcCCCcEEEEEEcCCCC--CCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC
Q 016533 69 TAPRIKLRDGRHLAYKEHGVPK--DNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA 146 (388)
Q Consensus 69 ~~~~~~~~~g~~l~y~~~g~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 146 (388)
..+.+.+.||.+|+.+...+.+ ..+.++||++||++++...+. .+ +..+.++||.|+.+|+|
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~---~~-------------A~~La~~G~~vLrfD~r 73 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFA---GL-------------AEYLSSNGFHVIRYDSL 73 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHH---HH-------------HHHHHHCCCEEEEecCC
Confidence 4557888899999988886542 234688999999999876666 55 55555669999999999
Q ss_pred Cc-CCCCCCC-CCChhhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 147 GY-GESDPNP-NRTVKSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 147 G~-G~S~~~~-~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
|+ |.|++.- ..+.....+|+..+++++ +. +++.|+||||||.+++..|... +++++|+.+|+.+
T Consensus 74 g~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~-~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~ 142 (307)
T PRK13604 74 HHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGI-NNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN 142 (307)
T ss_pred CCCCCCCCccccCcccccHHHHHHHHHHHHhcCC-CceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc
Confidence 88 9997543 234444567776666655 44 6899999999999997777643 4999999999854
No 52
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.90 E-value=2.6e-22 Score=157.35 Aligned_cols=223 Identities=16% Similarity=0.165 Sum_probs=159.5
Q ss_pred CCccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeC
Q 016533 65 GPAVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYD 144 (388)
Q Consensus 65 ~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 144 (388)
+.+.+...+.+.|.++++.+..-+ +++.|+++++||..++..... ++ +..+....+.+|+.++
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~--E~S~pTlLyfh~NAGNmGhr~---~i------------~~~fy~~l~mnv~ivs 113 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLS--ESSRPTLLYFHANAGNMGHRL---PI------------ARVFYVNLKMNVLIVS 113 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeecc--cCCCceEEEEccCCCcccchh---hH------------HHHHHHHcCceEEEEE
Confidence 667778888888999998665542 357999999999999999887 77 6777788899999999
Q ss_pred CCCcCCCCCCCCCChhhHHHHHHHHHHHh------CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCC
Q 016533 145 RAGYGESDPNPNRTVKSDALDIEELADQL------GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPG 218 (388)
Q Consensus 145 ~~G~G~S~~~~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~ 218 (388)
+||+|.|++.+ +-+...-|-+.+++++ .. .++++.|.|+||.+|+.+|++..+++.++|+-+++..+
T Consensus 114 YRGYG~S~Gsp--sE~GL~lDs~avldyl~t~~~~dk-tkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI---- 186 (300)
T KOG4391|consen 114 YRGYGKSEGSP--SEEGLKLDSEAVLDYLMTRPDLDK-TKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI---- 186 (300)
T ss_pred eeccccCCCCc--cccceeccHHHHHHHHhcCccCCc-ceEEEEecccCCeeEEEeeccchhheeeeeeechhccc----
Confidence 99999998765 3333444445555554 23 69999999999999999999999999999999987542
Q ss_pred CCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhch
Q 016533 219 FPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGE 298 (388)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (388)
|.... + -.++ .....+..+ .
T Consensus 187 -p~~~i---------------------~---------~v~p--------------~~~k~i~~l---------------c 206 (300)
T KOG4391|consen 187 -PHMAI---------------------P---------LVFP--------------FPMKYIPLL---------------C 206 (300)
T ss_pred -hhhhh---------------------h---------eecc--------------chhhHHHHH---------------H
Confidence 10000 0 0000 000000000 0
Q ss_pred hhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCC--CceEEEeCCCCCCcccCCCch
Q 016533 299 YESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLP--WIHYHELSGAGHMFPFTDGMS 376 (388)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~~~~ 376 (388)
+...+. +..++ ..-+.|.|+|.|.+|.++||-..+.+++.+| +.++.++|++.|.-..-.+-.
T Consensus 207 ~kn~~~-----------S~~ki----~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGY 271 (300)
T KOG4391|consen 207 YKNKWL-----------SYRKI----GQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGY 271 (300)
T ss_pred HHhhhc-----------chhhh----ccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccH
Confidence 000000 00011 1234559999999999999999999999996 457999999999877666778
Q ss_pred HHHHHHhhcC
Q 016533 377 DTIVKAVLTG 386 (388)
Q Consensus 377 ~~~i~~fl~~ 386 (388)
.++|++||.+
T Consensus 272 fq~i~dFlaE 281 (300)
T KOG4391|consen 272 FQAIEDFLAE 281 (300)
T ss_pred HHHHHHHHHH
Confidence 8999999965
No 53
>PLN02872 triacylglycerol lipase
Probab=99.89 E-value=6.6e-22 Score=178.74 Aligned_cols=138 Identities=21% Similarity=0.234 Sum_probs=103.4
Q ss_pred CCCccccCeEEcCCCcEEEEEEcCCCC----CCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeE
Q 016533 64 GGPAVTAPRIKLRDGRHLAYKEHGVPK----DNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVY 139 (388)
Q Consensus 64 ~~~~~~~~~~~~~~g~~l~y~~~g~~~----~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 139 (388)
.+.+.++.++++.||..|.......+. ...+++||++||+++++..|. ...|- ......+.+.||+
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~---~~~~~-------~sla~~La~~Gyd 109 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWF---LNSPE-------QSLGFILADHGFD 109 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccccee---ecCcc-------cchHHHHHhCCCC
Confidence 367788889999999999988864321 123689999999999999986 22110 0024445566999
Q ss_pred EEEeCCCCcCCCCC-------CC---CCChhhHH-HHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCCc---cc
Q 016533 140 IVSYDRAGYGESDP-------NP---NRTVKSDA-LDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIPH---RL 202 (388)
Q Consensus 140 vi~~D~~G~G~S~~-------~~---~~~~~~~~-~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v 202 (388)
|+++|+||++.|.. .. .+++++++ .|+.++++++ .. ++++++||||||.+++.++ .+|+ +|
T Consensus 110 V~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v 187 (395)
T PLN02872 110 VWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMV 187 (395)
T ss_pred cccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHH
Confidence 99999999886532 11 35788888 7999999987 33 6999999999999998555 5676 68
Q ss_pred ceeEeeccccc
Q 016533 203 AGAGLLAPVVN 213 (388)
Q Consensus 203 ~~lil~~~~~~ 213 (388)
+.+++++|...
T Consensus 188 ~~~~~l~P~~~ 198 (395)
T PLN02872 188 EAAALLCPISY 198 (395)
T ss_pred HHHHHhcchhh
Confidence 89999998754
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=1.6e-22 Score=172.58 Aligned_cols=218 Identities=22% Similarity=0.369 Sum_probs=126.8
Q ss_pred eEEEEeCCCCcCCCCC-----CCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 138 VYIVSYDRAGYGESDP-----NPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 138 ~~vi~~D~~G~G~S~~-----~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
|+|+++|+||+|.|++ ...++.+++++++..+++.++. ++++++||||||.+++.+|..+|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI-KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT-SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC-CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999995 2356899999999999999999 689999999999999999999999999999999851
Q ss_pred ccCCCCCCchhhHHHHhh-cCCch---hHHHHHHhhcchhhhhhcccccccchhhhhc-cccccChhhHHHHhhcCCCch
Q 016533 213 NYWWPGFPANLSKEAYYQ-QLPQD---QWAVRVAHYIPWLTYWWNTQKWFLPSAVIAH-RMDIFSRQDVEVLSKWSPEEN 287 (388)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 287 (388)
. .........+.. ..... .................... .. ..... ................. .
T Consensus 80 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~---~ 147 (230)
T PF00561_consen 80 D-----LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQ-FF---AYDREFVEDFLKQFQSQQYARFA---E 147 (230)
T ss_dssp H-----HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHTHHHHHHHHHHHHTC---H
T ss_pred c-----chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhh-ee---eccCccccchhhccchhhhhHHH---H
Confidence 0 000000000000 00000 00000000000000000000 00 00000 00000000000000000 0
Q ss_pred HHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCC
Q 016533 288 NYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGH 367 (388)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH 367 (388)
.................+ +....+.++++|+++++|++|.++|++....+.+.+|+.++++++++||
T Consensus 148 --------~~~~~~~~~~~~~~~~~~-----~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH 214 (230)
T PF00561_consen 148 --------TDAFDNMFWNALGYFSVW-----DPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGH 214 (230)
T ss_dssp --------HHHHHHHHHHHHHHHHHH-----HHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCS
T ss_pred --------HHHHhhhccccccccccc-----cccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCCh
Confidence 000000000000000000 1112344578889999999999999999999999999999999999999
Q ss_pred CcccC-CCchHHHHH
Q 016533 368 MFPFT-DGMSDTIVK 381 (388)
Q Consensus 368 ~~~~e-~~~~~~~i~ 381 (388)
+.+.+ ++++++.|.
T Consensus 215 ~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 215 FAFLEGPDEFNEIII 229 (230)
T ss_dssp THHHHSHHHHHHHHH
T ss_pred HHHhcCHHhhhhhhc
Confidence 99999 999988875
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.87 E-value=1.8e-20 Score=163.41 Aligned_cols=116 Identities=20% Similarity=0.234 Sum_probs=84.6
Q ss_pred CCcEEEEEEcCCCCCCCCceEEEEccCCCCC----ccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCC
Q 016533 77 DGRHLAYKEHGVPKDNAKYKIFFVHGFDSCR----HDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESD 152 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~ 152 (388)
+|.++.-..+-+.. ..++.||++||++... ..|. .+ ...+.+.||+|+++|+||||.|.
T Consensus 10 ~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~~~~---~l-------------a~~l~~~G~~v~~~Dl~G~G~S~ 72 (274)
T TIGR03100 10 EGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHRQFV---LL-------------ARRLAEAGFPVLRFDYRGMGDSE 72 (274)
T ss_pred CCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchhHHH---HH-------------HHHHHHCCCEEEEeCCCCCCCCC
Confidence 56666655553332 2356788888765322 2233 33 34444559999999999999997
Q ss_pred CCCCCChhhHHHHHHHHHHHh-----CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 153 PNPNRTVKSDALDIEELADQL-----GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 153 ~~~~~~~~~~~~dl~~~l~~l-----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
... .+++++.+|+.++++.+ +. ++++++|||+||.+++.+|.. +++|+++|+++|..
T Consensus 73 ~~~-~~~~~~~~d~~~~~~~l~~~~~g~-~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 73 GEN-LGFEGIDADIAAAIDAFREAAPHL-RRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred CCC-CCHHHHHHHHHHHHHHHHhhCCCC-CcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 542 47778888888888877 44 679999999999999999875 57899999999864
No 56
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.86 E-value=1.6e-20 Score=174.30 Aligned_cols=284 Identities=12% Similarity=0.082 Sum_probs=150.5
Q ss_pred cccCeEEcCCCcEEEEEEcCCCCC-CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC
Q 016533 68 VTAPRIKLRDGRHLAYKEHGVPKD-NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA 146 (388)
Q Consensus 68 ~~~~~~~~~~g~~l~y~~~g~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 146 (388)
.+...+...++ .+....+.+..+ ..+++||++||+......|++ +|.-+. +..+.+ .||+|+++|++
T Consensus 162 ~Tpg~VV~~~~-~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL----~p~~Sl------v~~L~~-qGf~V~~iDwr 229 (532)
T TIGR01838 162 TTPGAVVFENE-LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDL----RPQNSL------VRWLVE-QGHTVFVISWR 229 (532)
T ss_pred CCCCeEEEECC-cEEEEEeCCCCCcCCCCcEEEECcccccceeeec----ccchHH------HHHHHH-CCcEEEEEECC
Confidence 34445554343 244444443322 247899999999988888862 111111 455555 49999999999
Q ss_pred CcCCCCCCC---CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHH----HHHHhC-CcccceeEeeccccccCCCC
Q 016533 147 GYGESDPNP---NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIW----GCLKYI-PHRLAGAGLLAPVVNYWWPG 218 (388)
Q Consensus 147 G~G~S~~~~---~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~----~~a~~~-p~~v~~lil~~~~~~~~~~~ 218 (388)
|+|.+.... +|..+.+.+.+..+++.++. ++++++||||||.++. .+++.+ +++|++++++++..++..++
T Consensus 230 gpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~-~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G 308 (532)
T TIGR01838 230 NPDASQADKTFDDYIRDGVIAALEVVEAITGE-KQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPG 308 (532)
T ss_pred CCCcccccCChhhhHHHHHHHHHHHHHHhcCC-CCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcc
Confidence 999886432 23344455567777777788 7999999999999852 345555 78999999999987754322
Q ss_pred CCchhhHHHHhhcCCchhHHHHHHhhcchh-hhh----hcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHH
Q 016533 219 FPANLSKEAYYQQLPQDQWAVRVAHYIPWL-TYW----WNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALA 293 (388)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (388)
.-............. .... ...+++.. +.. .....++-.. ........-.....+ +..+..+... ....
T Consensus 309 ~l~~f~~~~~~~~~e--~~~~-~~G~lpg~~m~~~F~~lrp~~l~w~~-~v~~yl~g~~~~~fd-ll~Wn~D~t~-lP~~ 382 (532)
T TIGR01838 309 ELGVFVDEEIVAGIE--RQNG-GGGYLDGRQMAVTFSLLRENDLIWNY-YVDNYLKGKSPVPFD-LLFWNSDSTN-LPGK 382 (532)
T ss_pred hhhhhcCchhHHHHH--HHHH-hcCCCCHHHHHHHHHhcChhhHHHHH-HHHHHhcCCCccchh-HHHHhccCcc-chHH
Confidence 111100000000000 0000 00001100 000 0000000000 000000000000000 1111111100 0011
Q ss_pred HhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC
Q 016533 294 RQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT 372 (388)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 372 (388)
......+.+..+...... .+........+.+|++|+++|+|++|.++|++.++.+.+.+++.+.++++++||..+++
T Consensus 383 ~~~~~lr~ly~~N~L~~G--~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 383 MHNFYLRNLYLQNALTTG--GLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVV 459 (532)
T ss_pred HHHHHHHHHHhcCCCcCC--eeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhh
Confidence 111111111111111111 12222344567889999999999999999999999999999999999999999999988
No 57
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.86 E-value=1.3e-20 Score=153.69 Aligned_cols=211 Identities=22% Similarity=0.248 Sum_probs=146.4
Q ss_pred cccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCC
Q 016533 68 VTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAG 147 (388)
Q Consensus 68 ~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G 147 (388)
.+-..+.+..|..+.-..+.++. ...++|+++||...+-.+.. .+ +..+....+++|+.+|++|
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~-~~~~~lly~hGNa~Dlgq~~---~~------------~~~l~~~ln~nv~~~DYSG 98 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPE-AAHPTLLYSHGNAADLGQMV---EL------------FKELSIFLNCNVVSYDYSG 98 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCcc-ccceEEEEcCCcccchHHHH---HH------------HHHHhhcccceEEEEeccc
Confidence 34445555666655544443332 34689999999976666554 44 4666666689999999999
Q ss_pred cCCCCCCCCCChhhHHHHHHHHHHHh----CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchh
Q 016533 148 YGESDPNPNRTVKSDALDIEELADQL----GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANL 223 (388)
Q Consensus 148 ~G~S~~~~~~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~ 223 (388)
+|.|.+.+. -....+|+.++.+.+ |..++++|+|+|+|+..++.+|.+.| ++++||.+|..+...
T Consensus 99 yG~S~G~ps--E~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r------- 167 (258)
T KOG1552|consen 99 YGRSSGKPS--ERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR------- 167 (258)
T ss_pred ccccCCCcc--cccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhh-------
Confidence 999987653 224455555544444 33379999999999999999999988 999999999753100
Q ss_pred hHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHH
Q 016533 224 SKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLH 303 (388)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (388)
..++. ...
T Consensus 168 --------------------------------v~~~~------------------~~~---------------------- 175 (258)
T KOG1552|consen 168 --------------------------------VAFPD------------------TKT---------------------- 175 (258)
T ss_pred --------------------------------hhccC------------------cce----------------------
Confidence 00000 000
Q ss_pred HHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCc-eEEEeCCCCCCcccCCCchHHHHHH
Q 016533 304 RDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWI-HYHELSGAGHMFPFTDGMSDTIVKA 382 (388)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~~~~~~~i~~ 382 (388)
.+.++.......++.|+||||++||++|++++....+++++.+++. +-.++.|+||.-..-..++.+.+..
T Consensus 176 --------~~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~ 247 (258)
T KOG1552|consen 176 --------TYCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRR 247 (258)
T ss_pred --------EEeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHH
Confidence 0000000112346678889999999999999999999999999875 7788899999876556667788888
Q ss_pred hhc
Q 016533 383 VLT 385 (388)
Q Consensus 383 fl~ 385 (388)
|+.
T Consensus 248 f~~ 250 (258)
T KOG1552|consen 248 FIS 250 (258)
T ss_pred HHH
Confidence 875
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.86 E-value=2.4e-20 Score=152.80 Aligned_cols=186 Identities=15% Similarity=0.126 Sum_probs=122.9
Q ss_pred ceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHH--hCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHH
Q 016533 95 YKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIED--LGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQ 172 (388)
Q Consensus 95 ~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~ 172 (388)
|+||++||++++...|. .. .+..++.+ .+|+|+++|+|||| ++.++++.+++++
T Consensus 2 p~illlHGf~ss~~~~~---~~-----------~~~~~l~~~~~~~~v~~~dl~g~~----------~~~~~~l~~l~~~ 57 (190)
T PRK11071 2 STLLYLHGFNSSPRSAK---AT-----------LLKNWLAQHHPDIEMIVPQLPPYP----------ADAAELLESLVLE 57 (190)
T ss_pred CeEEEECCCCCCcchHH---HH-----------HHHHHHHHhCCCCeEEeCCCCCCH----------HHHHHHHHHHHHH
Confidence 57999999999999987 32 02344433 26999999999985 4688899999999
Q ss_pred hCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhh
Q 016533 173 LGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWW 252 (388)
Q Consensus 173 l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (388)
++. ++++++||||||.+++.+|.++|. .+|+++|... +.. ....+ .. ..
T Consensus 58 ~~~-~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~------~~~-~~~~~---~~-------------~~---- 106 (190)
T PRK11071 58 HGG-DPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR------PFE-LLTDY---LG-------------EN---- 106 (190)
T ss_pred cCC-CCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC------HHH-HHHHh---cC-------------Cc----
Confidence 988 799999999999999999999983 4688888632 000 00000 00 00
Q ss_pred cccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEE
Q 016533 253 NTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVH 332 (388)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvl 332 (388)
...... ....++.. ...+... ++...++ ..+|++
T Consensus 107 -~~~~~~-------~~~~~~~~---------------------------~~~d~~~------~~~~~i~-----~~~~v~ 140 (190)
T PRK11071 107 -ENPYTG-------QQYVLESR---------------------------HIYDLKV------MQIDPLE-----SPDLIW 140 (190)
T ss_pred -ccccCC-------CcEEEcHH---------------------------HHHHHHh------cCCccCC-----ChhhEE
Confidence 000000 00001100 1111100 0111221 445599
Q ss_pred EEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccCCCchHHHHHHhhc
Q 016533 333 LWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFTDGMSDTIVKAVLT 385 (388)
Q Consensus 333 ii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~~~~~~~i~~fl~ 385 (388)
+++|++|+++|.+.+.++++. +++++++|++|.... .+++.+.+.+|+.
T Consensus 141 iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f~~-~~~~~~~i~~fl~ 189 (190)
T PRK11071 141 LLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAFVG-FERYFNQIVDFLG 189 (190)
T ss_pred EEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcchhh-HHHhHHHHHHHhc
Confidence 999999999999999999884 467788999998732 5778888888875
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.86 E-value=3.6e-20 Score=167.65 Aligned_cols=106 Identities=12% Similarity=0.125 Sum_probs=79.0
Q ss_pred CCceEEEEccCCCCCcccccc--ccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHH-HHH-
Q 016533 93 AKYKIFFVHGFDSCRHDSAVA--NFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALD-IEE- 168 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~d-l~~- 168 (388)
.+++||++||+..+...+++. ..+ +..+ .+.||+|+++|++|+|.|+. ..++++++++ +.+
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~------------~~~L-~~~G~~V~~~D~~g~g~s~~--~~~~~d~~~~~~~~~ 125 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSL------------VRGL-LERGQDVYLIDWGYPDRADR--YLTLDDYINGYIDKC 125 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchH------------HHHH-HHCCCeEEEEeCCCCCHHHh--cCCHHHHHHHHHHHH
Confidence 356799999987665554310 022 4444 45599999999999998763 3466666543 444
Q ss_pred ---HHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeecccccc
Q 016533 169 ---LADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNY 214 (388)
Q Consensus 169 ---~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~ 214 (388)
+++..+. ++++++||||||.+++.++..+|++|+++|++++..++
T Consensus 126 v~~l~~~~~~-~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 126 VDYICRTSKL-DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHhCC-CcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 4444566 79999999999999999999999999999999988764
No 60
>PRK10566 esterase; Provisional
Probab=99.83 E-value=1.1e-19 Score=157.01 Aligned_cols=100 Identities=21% Similarity=0.283 Sum_probs=70.5
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC-CCCh-------hhHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP-NRTV-------KSDAL 164 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~-------~~~~~ 164 (388)
+.|+||++||++++...|. .+ ...+. +.||.|+++|+||||.+.... .... .+..+
T Consensus 26 ~~p~vv~~HG~~~~~~~~~---~~------------~~~l~-~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYS---YF------------AVALA-QAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQ 89 (249)
T ss_pred CCCEEEEeCCCCcccchHH---HH------------HHHHH-hCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHH
Confidence 4689999999999988887 66 45554 459999999999999763211 1111 12234
Q ss_pred HHHHHHHHh------CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeec
Q 016533 165 DIEELADQL------GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLA 209 (388)
Q Consensus 165 dl~~~l~~l------~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~ 209 (388)
|+.++++.+ +. ++++++|||+||.+++.++.++|+....+++++
T Consensus 90 ~~~~~~~~l~~~~~~~~-~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 90 EFPTLRAAIREEGWLLD-DRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHHHHHHhcCCcCc-cceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 454444443 23 689999999999999999999886544444444
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=2.3e-18 Score=149.58 Aligned_cols=267 Identities=20% Similarity=0.219 Sum_probs=151.5
Q ss_pred CCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHh-CeEEEEeCCCCcCCCCCCC
Q 016533 77 DGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDL-GVYIVSYDRAGYGESDPNP 155 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~ 155 (388)
.+..+.|...+.. +++|+++||++++...|. .. ...+.... .|+|+.+|+||||.|. ..
T Consensus 8 ~~~~~~~~~~~~~----~~~i~~~hg~~~~~~~~~---~~------------~~~~~~~~~~~~~~~~d~~g~g~s~-~~ 67 (282)
T COG0596 8 DGVRLAYREAGGG----GPPLVLLHGFPGSSSVWR---PV------------FKVLPALAARYRVIAPDLRGHGRSD-PA 67 (282)
T ss_pred CCeEEEEeecCCC----CCeEEEeCCCCCchhhhH---HH------------HHHhhccccceEEEEecccCCCCCC-cc
Confidence 5566777777654 559999999999999998 42 12333321 1899999999999997 11
Q ss_pred CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCch
Q 016533 156 NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQD 235 (388)
Q Consensus 156 ~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (388)
.+.....++++..++++++. .+++++|||+||.+++.++.++|+++++++++++..... ........ .......
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~---~~~~~~~~--~~~~~~~ 141 (282)
T COG0596 68 GYSLSAYADDLAALLDALGL-EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPG---LLEAALRQ--PAGAAPL 141 (282)
T ss_pred cccHHHHHHHHHHHHHHhCC-CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcc---cccCcccc--Cccccch
Confidence 33555569999999999998 679999999999999999999999999999999764200 00000000 0000000
Q ss_pred hHHHHHHhhc-chhhhhhcccc-cccchhhhhccccccChhh-HHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccC
Q 016533 236 QWAVRVAHYI-PWLTYWWNTQK-WFLPSAVIAHRMDIFSRQD-VEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGT 312 (388)
Q Consensus 236 ~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (388)
.......... ........... +... ..... .................................
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 207 (282)
T COG0596 142 AALADLLLGLDAAAFAALLAALGLLAA----------LAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLA---- 207 (282)
T ss_pred hhhhhhhhccchhhhhhhhhccccccc----------ccccchhccccccccccchhHhhhhhhhcccccchhhhc----
Confidence 0000000000 00000000000 0000 00000 000000000000000000000000000000000
Q ss_pred cCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCC-ceEEEeCCCCCCcccC-CCchHHHHHHhhc
Q 016533 313 WEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPW-IHYHELSGAGHMFPFT-DGMSDTIVKAVLT 385 (388)
Q Consensus 313 ~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 385 (388)
.... .......++++|+++++|++|.+.|......+.+..++ .++++++++||+++.+ |+.+.+.+.+|++
T Consensus 208 -~~~~-~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 208 -LLDR-DLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred -cccc-ccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 0000 22335566788899999999977777667777778885 8999999999999999 9999999888554
No 62
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.81 E-value=8.5e-19 Score=137.68 Aligned_cols=220 Identities=15% Similarity=0.144 Sum_probs=140.1
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCC-ChhhHHHHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNR-TVKSDALDIEELADQ 172 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~dl~~~l~~ 172 (388)
...+|++||+-++...-.+ .. ++..+++.|+.++.+|++|.|+|+....| .....++|+..++++
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~--~~------------vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~ 98 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIM--KN------------VAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQY 98 (269)
T ss_pred ceEEEEeeccccccchHHH--HH------------HHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHH
Confidence 6799999999988765331 22 45566667999999999999999876654 456677999999999
Q ss_pred hCC-C-CcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHH-Hhhcchhh
Q 016533 173 LGV-G-SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRV-AHYIPWLT 249 (388)
Q Consensus 173 l~~-~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 249 (388)
+.- + .--+++|||-||.+++.+|.++++ +.-+|-+++-.+. ...+ .+..+..+
T Consensus 99 ~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl-----------------------~~~I~eRlg~~~l 154 (269)
T KOG4667|consen 99 FSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL-----------------------KNGINERLGEDYL 154 (269)
T ss_pred hccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccch-----------------------hcchhhhhcccHH
Confidence 843 1 234789999999999999999987 6777777664320 0001 01111112
Q ss_pred hhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCc
Q 016533 250 YWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEG 329 (388)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~ 329 (388)
.+...+.++.-..........++++... +.+..++... .++.+ .+|
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlm----------------------drLntd~h~a---------clkId---~~C 200 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLM----------------------DRLNTDIHEA---------CLKID---KQC 200 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHH----------------------HHHhchhhhh---------hcCcC---ccC
Confidence 1111222222111111111112211100 0111111000 11111 457
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccCCCchHHHHHHhhc
Q 016533 330 SVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFTDGMSDTIVKAVLT 385 (388)
Q Consensus 330 Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~~~~~~~i~~fl~ 385 (388)
|||-+||..|.++|.+.++++++.+++-++.++||+.|......++.......|..
T Consensus 201 ~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 201 RVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQLVSLGLEFIK 256 (269)
T ss_pred ceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchhhhHhhhcceeEE
Confidence 79999999999999999999999999999999999999887665566666555543
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.81 E-value=3.3e-19 Score=140.61 Aligned_cols=142 Identities=27% Similarity=0.375 Sum_probs=107.1
Q ss_pred eEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHH-H-Hh
Q 016533 96 KIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELA-D-QL 173 (388)
Q Consensus 96 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l-~-~l 173 (388)
+||++||++++...|. .+ ...+.++ ||.|+.+|+||+|.+... +.++++.+.+ + ..
T Consensus 1 ~vv~~HG~~~~~~~~~---~~------------~~~l~~~-G~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 58 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQ---PL------------AEALAEQ-GYAVVAFDYPGHGDSDGA------DAVERVLADIRAGYP 58 (145)
T ss_dssp EEEEECTTTTTTHHHH---HH------------HHHHHHT-TEEEEEESCTTSTTSHHS------HHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCHHHHH---HH------------HHHHHHC-CCEEEEEecCCCCccchh------HHHHHHHHHHHhhcC
Confidence 5899999999999888 77 5666555 999999999999988321 1222222222 1 23
Q ss_pred CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhc
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWN 253 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (388)
+. ++++++|||+||.+++.++.++ .+++++|++++...
T Consensus 59 ~~-~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~---------------------------------------- 96 (145)
T PF12695_consen 59 DP-DRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD---------------------------------------- 96 (145)
T ss_dssp TC-CEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG----------------------------------------
T ss_pred CC-CcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc----------------------------------------
Confidence 55 7999999999999999999997 89999999997310
Q ss_pred ccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEE
Q 016533 254 TQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHL 333 (388)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvli 333 (388)
. + .+.+.++|+++
T Consensus 97 ------------------~----~---------------------------------------------~~~~~~~pv~~ 109 (145)
T PF12695_consen 97 ------------------S----E---------------------------------------------DLAKIRIPVLF 109 (145)
T ss_dssp ------------------C----H---------------------------------------------HHTTTTSEEEE
T ss_pred ------------------h----h---------------------------------------------hhhccCCcEEE
Confidence 0 0 01112235999
Q ss_pred EecCCCCCCcHHHHHHHHHhCC-CceEEEeCCCCCC
Q 016533 334 WHGDEDRLVPVILQRYIVQRLP-WIHYHELSGAGHM 368 (388)
Q Consensus 334 i~G~~D~~~p~~~~~~~~~~~~-~~~~~~i~~~gH~ 368 (388)
++|++|.+++.+..+.+.+.++ +.++++++|++|+
T Consensus 110 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 110 IHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred EEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 9999999999999999988886 5799999999996
No 64
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.81 E-value=2e-18 Score=175.62 Aligned_cols=266 Identities=15% Similarity=0.143 Sum_probs=142.8
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCc-hHHHHHHhCeEEEEeCCCCcCCCCCCCC---CChhhHHHHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGI-YQEVIEDLGVYIVSYDRAGYGESDPNPN---RTVKSDALDIEE 168 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~dl~~ 168 (388)
.+++|||+||++.+...|+ ... ..+ +..|. +.||+|+++|+ |.++.... .++.+++..+.+
T Consensus 66 ~~~plllvhg~~~~~~~~d---~~~--------~~s~v~~L~-~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~ 130 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWD---VTR--------DDGAVGILH-RAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSE 130 (994)
T ss_pred CCCcEEEECCCCCCcccee---cCC--------cccHHHHHH-HCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHH
Confidence 5789999999999999998 430 000 24444 44999999995 66654332 466666666666
Q ss_pred HHHH---hCCCCcEEEEEecccHHHHHHHHHhC-CcccceeEeeccccccCCCC---CCchhhHH-------HHhhcCCc
Q 016533 169 LADQ---LGVGSKFYVIGYSMGGHPIWGCLKYI-PHRLAGAGLLAPVVNYWWPG---FPANLSKE-------AYYQQLPQ 234 (388)
Q Consensus 169 ~l~~---l~~~~~~~lvGhS~Gg~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~---~~~~~~~~-------~~~~~~~~ 234 (388)
.++. +.. ++++++||||||.+++.+++.+ +++|+++|++++..++.... .+...... .......-
T Consensus 131 ~l~~v~~~~~-~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (994)
T PRK07868 131 AIDTVKDVTG-RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDI 209 (994)
T ss_pred HHHHHHHhhC-CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCC
Confidence 6554 344 6899999999999999998755 56899999999886542211 11000000 00000000
Q ss_pred hhHHHHHHh-hcchhhhhhcccccccchhhhhccccccChhh-HHHHhh--cCCCchHHHHHHHhhchhhHHHHHHHhhc
Q 016533 235 DQWAVRVAH-YIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQD-VEVLSK--WSPEENNYMALARQQGEYESLHRDMMVGF 310 (388)
Q Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
..|...... .+...........++. ..........++. .+.+.. +.... ......+........
T Consensus 210 p~~~~~~~~~~l~p~~~~~~~~~~~~---~l~~~~~~~~~e~~~~~~~~~~w~~~~---------g~~~~~~~~~~~~~n 277 (994)
T PRK07868 210 PGWMARTGFQMLDPVKTAKARVDFLR---QLHDREALLPREQQRRFLESEGWIAWS---------GPAISELLKQFIAHN 277 (994)
T ss_pred CHHHHHHHHHhcChhHHHHHHHHHHH---hcCchhhhccchhhHhHHHHhhccccc---------hHHHHHHHHHHHHhC
Confidence 011000000 0000000000000000 0000000000000 000000 00000 001111222221110
Q ss_pred cCcC--CCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceE-EEeCCCCCCcccC----CCchHHHHHHh
Q 016533 311 GTWE--FDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHY-HELSGAGHMFPFT----DGMSDTIVKAV 383 (388)
Q Consensus 311 ~~~~--~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~-~~i~~~gH~~~~e----~~~~~~~i~~f 383 (388)
.... +....-...+.++++|+|+|+|++|.++|++..+.+.+.++++++ .+++++||+.++- ++.+...|.+|
T Consensus 278 ~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~w 357 (994)
T PRK07868 278 RMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADW 357 (994)
T ss_pred cccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHH
Confidence 0000 000011124678888999999999999999999999999999987 6789999998764 77788889999
Q ss_pred hcC
Q 016533 384 LTG 386 (388)
Q Consensus 384 l~~ 386 (388)
|..
T Consensus 358 l~~ 360 (994)
T PRK07868 358 VKW 360 (994)
T ss_pred HHH
Confidence 874
No 65
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.6e-18 Score=148.89 Aligned_cols=290 Identities=19% Similarity=0.217 Sum_probs=167.4
Q ss_pred CCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHH------HhCeEEEEeCCCCcC-
Q 016533 77 DGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIE------DLGVYIVSYDRAGYG- 149 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~g~~vi~~D~~G~G- 149 (388)
++.+|.|+.+|.......+.||++||+.++..... ..... ..+| +..+.- ...|.||+.|..|.+
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~---~~~~~-~~GW----W~~liGpG~~iDt~r~fvIc~NvlG~c~ 105 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAG---TADDG-EKGW----WDDLIGPGKPIDTERFFVICTNVLGGCK 105 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccc---cCCCC-CCcc----HHHhcCCCCCCCccceEEEEecCCCCCC
Confidence 46689999999987666789999999999887765 33222 2266 344432 224999999999976
Q ss_pred CCCCC--------------CCCChhhHHHHHHHHHHHhCCCCcEE-EEEecccHHHHHHHHHhCCcccceeEeecccccc
Q 016533 150 ESDPN--------------PNRTVKSDALDIEELADQLGVGSKFY-VIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNY 214 (388)
Q Consensus 150 ~S~~~--------------~~~~~~~~~~dl~~~l~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~ 214 (388)
.|+.+ +..+++|+++.-..++++||+ +++. +||-||||+.+++++..|||+|+++|.+++....
T Consensus 106 GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI-~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~ 184 (368)
T COG2021 106 GSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGI-KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARL 184 (368)
T ss_pred CCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCc-ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccC
Confidence 33322 124788999888899999999 5665 9999999999999999999999999999986431
Q ss_pred CCCCCCchhhHHHHhh--cCCchhH-------------HHHHHhhcchhhhhhc--ccccccchhhhhccccccC--hhh
Q 016533 215 WWPGFPANLSKEAYYQ--QLPQDQW-------------AVRVAHYIPWLTYWWN--TQKWFLPSAVIAHRMDIFS--RQD 275 (388)
Q Consensus 215 ~~~~~~~~~~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~ 275 (388)
.+....-....+ ......| ...+.+.+..+.+..- ...-|..... ..+.... ...
T Consensus 185 ----s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~--~~~~~~~~~~f~ 258 (368)
T COG2021 185 ----SAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQ--ADPLRGGGVRFA 258 (368)
T ss_pred ----CHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhccccc--ccccCCCchhHH
Confidence 111111110000 0000011 1111111111100000 0000000000 0000000 011
Q ss_pred HHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCC
Q 016533 276 VEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLP 355 (388)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~ 355 (388)
.+.+.....+. .........+..+.+.+.. -+......++..-+.++++|++++.-+.|.+.|++..+++.+.++
T Consensus 259 vESYL~~qg~k---f~~rfDaNsYL~lt~ald~--~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~ 333 (368)
T COG2021 259 VESYLDYQGDK---FVARFDANSYLYLTRALDY--HDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALP 333 (368)
T ss_pred HHHHHHHHHHH---HHhccCcchHHHHHHHHHh--cCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhcc
Confidence 11111110000 0011111111122211111 011111123444477899999999999999999999999999998
Q ss_pred Cce-EEEeC-CCCCCcccC-CCchHHHHHHhhcC
Q 016533 356 WIH-YHELS-GAGHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 356 ~~~-~~~i~-~~gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
.+. +++++ ..||..++. .+.+...|..||+.
T Consensus 334 ~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 334 AAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred ccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 776 76664 579999987 88899999999975
No 66
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.80 E-value=2.4e-19 Score=146.45 Aligned_cols=115 Identities=18% Similarity=0.220 Sum_probs=94.5
Q ss_pred EEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC--CC
Q 016533 80 HLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP--NR 157 (388)
Q Consensus 80 ~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~ 157 (388)
++..+..+++ .+.+|.+++.||.+.+...|. .+ ..++......+|+++|+||||+|.-.+ +.
T Consensus 61 t~n~Y~t~~~-~t~gpil~l~HG~G~S~LSfA---~~------------a~el~s~~~~r~~a~DlRgHGeTk~~~e~dl 124 (343)
T KOG2564|consen 61 TFNVYLTLPS-ATEGPILLLLHGGGSSALSFA---IF------------ASELKSKIRCRCLALDLRGHGETKVENEDDL 124 (343)
T ss_pred eEEEEEecCC-CCCccEEEEeecCcccchhHH---HH------------HHHHHhhcceeEEEeeccccCccccCChhhc
Confidence 4555555554 356899999999999999999 77 788888777899999999999997433 57
Q ss_pred ChhhHHHHHHHHHHHhC--CCCcEEEEEecccHHHHHHHHHh--CCcccceeEeeccc
Q 016533 158 TVKSDALDIEELADQLG--VGSKFYVIGYSMGGHPIWGCLKY--IPHRLAGAGLLAPV 211 (388)
Q Consensus 158 ~~~~~~~dl~~~l~~l~--~~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lil~~~~ 211 (388)
+.+.+++|+..+++.+- ...+++||||||||.+|.+.|.. -|. +.|+++++-+
T Consensus 125 S~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 125 SLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred CHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 99999999999999872 23689999999999999888764 355 8999999854
No 67
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.79 E-value=2.9e-18 Score=144.83 Aligned_cols=273 Identities=14% Similarity=0.134 Sum_probs=144.9
Q ss_pred ccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc
Q 016533 69 TAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY 148 (388)
Q Consensus 69 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~ 148 (388)
+...+.++||.-+-.....++.+..+|.||++||+.|++..-. +..+ .+-+.+.||.|+++|+|||
T Consensus 50 ~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y-~r~L-------------~~~~~~rg~~~Vv~~~Rgc 115 (345)
T COG0429 50 TRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPY-ARGL-------------MRALSRRGWLVVVFHFRGC 115 (345)
T ss_pred ceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHH-HHHH-------------HHHHHhcCCeEEEEecccc
Confidence 3447888888777666666665566789999999998776543 1122 3333445999999999999
Q ss_pred CCCCCC-CCCChhhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCCc--ccceeEeeccccccCCCCCCch
Q 016533 149 GESDPN-PNRTVKSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIPH--RLAGAGLLAPVVNYWWPGFPAN 222 (388)
Q Consensus 149 G~S~~~-~~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~~~~ 222 (388)
+.+... +...-.-+.+|+..+++.+ ....++..+|.|+||.+...+..+..+ .+.+.+.++...+.
T Consensus 116 s~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl-------- 187 (345)
T COG0429 116 SGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL-------- 187 (345)
T ss_pred cCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH--------
Confidence 988642 2222223336777666655 344799999999999555444444322 34555555543221
Q ss_pred hhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcC---CCchHHHHHHHhhchh
Q 016533 223 LSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWS---PEENNYMALARQQGEY 299 (388)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 299 (388)
.... .......+..-..+++-..+......++- . ..........+.++... ................
T Consensus 188 --~~~~-~~l~~~~s~~ly~r~l~~~L~~~~~~kl~------~-l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da 257 (345)
T COG0429 188 --EACA-YRLDSGFSLRLYSRYLLRNLKRNAARKLK------E-LEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADA 257 (345)
T ss_pred --HHHH-HHhcCchhhhhhHHHHHHHHHHHHHHHHH------h-cCcccCcHHHHHHHhhchHHhccceeeecccCCCcH
Confidence 0000 00000001000111111100000000000 0 00000100011111111 0000000000011111
Q ss_pred hHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHH-hCCCceEEEeCCCCCCcccC-CC---
Q 016533 300 ESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQ-RLPWIHYHELSGAGHMFPFT-DG--- 374 (388)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e-~~--- 374 (388)
.++++.. +-..-+++|.+|+|||++.+|++++++....... ..|++.+..-+.+||..++. ..
T Consensus 258 ~dYYr~a------------Ss~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~ 325 (345)
T COG0429 258 EDYYRQA------------SSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHP 325 (345)
T ss_pred HHHHHhc------------cccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccc
Confidence 1111111 2223578899999999999999999988766666 66889999999999988876 22
Q ss_pred --chHHHHHHhhc
Q 016533 375 --MSDTIVKAVLT 385 (388)
Q Consensus 375 --~~~~~i~~fl~ 385 (388)
...+.+.+||+
T Consensus 326 ~~W~~~ri~~~l~ 338 (345)
T COG0429 326 QMWLEQRILDWLD 338 (345)
T ss_pred hhhHHHHHHHHHH
Confidence 45667777775
No 68
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.76 E-value=1.4e-16 Score=139.75 Aligned_cols=276 Identities=16% Similarity=0.172 Sum_probs=151.7
Q ss_pred CCccccCeEEcCCCcEEEEEEcCCCCC------CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCe
Q 016533 65 GPAVTAPRIKLRDGRHLAYKEHGVPKD------NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGV 138 (388)
Q Consensus 65 ~~~~~~~~~~~~~g~~l~y~~~g~~~~------~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 138 (388)
...+++..++.+||..+.+....++.. ...|.||++||+.+++..-.+ .. +...+.+.||
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YV-r~-------------lv~~a~~~G~ 155 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYV-RH-------------LVHEAQRKGY 155 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHH-HH-------------HHHHHHhCCc
Confidence 345667788899999998876644432 346999999999987776331 02 2344455699
Q ss_pred EEEEeCCCCcCCCCCCCC-CChhhHHHHHHHHHHHhC---CCCcEEEEEecccHHHHHHHHHhCCc---ccceeEeeccc
Q 016533 139 YIVSYDRAGYGESDPNPN-RTVKSDALDIEELADQLG---VGSKFYVIGYSMGGHPIWGCLKYIPH---RLAGAGLLAPV 211 (388)
Q Consensus 139 ~vi~~D~~G~G~S~~~~~-~~~~~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lil~~~~ 211 (388)
+|++++.||+|.|.-... .--..+.+|+.++++++. ...++..+|.||||.+.+.|..+..+ .+.++++.+|+
T Consensus 156 r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 156 RVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred EEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 999999999999974332 233455667777766652 33689999999999999999987543 45666666665
Q ss_pred cccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccc-cccchhhhhccccccChhhHHHHhhcCCCchHHH
Q 016533 212 VNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQK-WFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYM 290 (388)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (388)
-. + .....+............+...+...... .+. ++. ...+.+...+...-...+.
T Consensus 236 d~-----~---~~~~~~~~~~~~~~y~~~l~~~l~~~~~~--~r~~~~~------------~~vd~d~~~~~~SvreFD~ 293 (409)
T KOG1838|consen 236 DL-----L---AASRSIETPLYRRFYNRALTLNLKRIVLR--HRHTLFE------------DPVDFDVILKSRSVREFDE 293 (409)
T ss_pred hh-----h---hhhhHHhcccchHHHHHHHHHhHHHHHhh--hhhhhhh------------ccchhhhhhhcCcHHHHHh
Confidence 21 0 00001111111000000011111100000 000 000 0000000000000000000
Q ss_pred HHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHH-HHHHHHhCCCceEEEeCCCCCCc
Q 016533 291 ALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVIL-QRYIVQRLPWIHYHELSGAGHMF 369 (388)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~-~~~~~~~~~~~~~~~i~~~gH~~ 369 (388)
........+.+.... +........+++|++|+|+|++.+|+++|++. -.......|++-+++-..+||..
T Consensus 294 ~~t~~~~gf~~~deY---------Y~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlg 364 (409)
T KOG1838|consen 294 ALTRPMFGFKSVDEY---------YKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLG 364 (409)
T ss_pred hhhhhhcCCCcHHHH---------HhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceee
Confidence 011111111111111 11123445678899999999999999999854 45555666888888888899999
Q ss_pred ccC---CC--c-hHHHHHHhhc
Q 016533 370 PFT---DG--M-SDTIVKAVLT 385 (388)
Q Consensus 370 ~~e---~~--~-~~~~i~~fl~ 385 (388)
++| |. . +.+.+.+|+.
T Consensus 365 fleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 365 FLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred eeccCCCccchhHHHHHHHHHH
Confidence 987 22 2 3333666664
No 69
>PRK11460 putative hydrolase; Provisional
Probab=99.76 E-value=3e-17 Score=139.15 Aligned_cols=173 Identities=16% Similarity=0.116 Sum_probs=115.3
Q ss_pred CCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC------------CC-
Q 016533 91 DNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP------------NR- 157 (388)
Q Consensus 91 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~------------~~- 157 (388)
.+.++.||++||++++...|. .+ ...+... ++.+..++.+|...+.... ..
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~---~l------------~~~l~~~-~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~ 76 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMG---EI------------GSWFAPA-FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNR 76 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHH---HH------------HHHHHHH-CCCCEEECCCCCCCcCCCCCcccccCCCCCccch
Confidence 345789999999999999998 77 5666544 4455555556543221100 01
Q ss_pred --ChhhHHHHHHHHHH----HhCCC-CcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhh
Q 016533 158 --TVKSDALDIEELAD----QLGVG-SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQ 230 (388)
Q Consensus 158 --~~~~~~~dl~~~l~----~l~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 230 (388)
.+.+..+.+.++++ ..+++ ++++++|||+||.+++.++..+|+.+.+++.+++...
T Consensus 77 ~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~----------------- 139 (232)
T PRK11460 77 QARVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA----------------- 139 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc-----------------
Confidence 11222223333333 33432 5899999999999999999999988888887765310
Q ss_pred cCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhc
Q 016533 231 QLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGF 310 (388)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
. ...
T Consensus 140 --------------------------------------~-~~~------------------------------------- 143 (232)
T PRK11460 140 --------------------------------------S-LPE------------------------------------- 143 (232)
T ss_pred --------------------------------------c-ccc-------------------------------------
Confidence 0 000
Q ss_pred cCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCC----CceEEEeCCCCCCcccC-CCchHHHHHHhhc
Q 016533 311 GTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLP----WIHYHELSGAGHMFPFT-DGMSDTIVKAVLT 385 (388)
Q Consensus 311 ~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 385 (388)
....+.|++++||++|+++|.+.++.+.+.+. ++++++++++||.+..+ -+.+.+.+.++|.
T Consensus 144 -------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 144 -------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred -------------cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 00012349999999999999999888887763 46788899999998876 6666666666663
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.76 E-value=1.4e-17 Score=142.35 Aligned_cols=126 Identities=14% Similarity=0.120 Sum_probs=91.7
Q ss_pred eEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCcccc-ccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCC
Q 016533 72 RIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSA-VANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGE 150 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~ 150 (388)
+++...|.... ..+.+....++++||++||+++....+. +...+ ...+. +.||.|+.+|+||||.
T Consensus 4 ~l~~~~g~~~~-~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~l------------a~~La-~~Gy~Vl~~Dl~G~G~ 69 (266)
T TIGR03101 4 FLDAPHGFRFC-LYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQ------------ARAFA-AGGFGVLQIDLYGCGD 69 (266)
T ss_pred EecCCCCcEEE-EEecCCCCCCceEEEEECCCcccccchhHHHHHH------------HHHHH-HCCCEEEEECCCCCCC
Confidence 45555665444 3343333234678999999987544333 00033 34443 4599999999999999
Q ss_pred CCCCC-CCChhhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 151 SDPNP-NRTVKSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 151 S~~~~-~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
|+... ..+++++++|+..+++.+ +. ++++++||||||.+++.++.++|++++++|+++|..
T Consensus 70 S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~-~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 70 SAGDFAAARWDVWKEDVAAAYRWLIEQGH-PPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred CCCccccCCHHHHHHHHHHHHHHHHhcCC-CCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 97543 457788888887765544 55 699999999999999999999999999999999874
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.75 E-value=1.7e-16 Score=138.61 Aligned_cols=122 Identities=19% Similarity=0.273 Sum_probs=89.2
Q ss_pred CCcEEEEEEcCCCC--CCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC--CCcCCCC
Q 016533 77 DGRHLAYKEHGVPK--DNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR--AGYGESD 152 (388)
Q Consensus 77 ~g~~l~y~~~g~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~--~G~G~S~ 152 (388)
-+..+.|..+.++. ..+.|+|+++||++++...|. .... +..++.+.||.|+++|. +|+|.+.
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~---~~~~----------~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFM---IKAG----------AQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHH---hhhH----------HHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 46677787776542 234689999999999998885 3200 35676777999999998 5555332
Q ss_pred CC---------------------CCCChhh-HHHHHHHHHHH---hCCCCcEEEEEecccHHHHHHHHHhCCcccceeEe
Q 016533 153 PN---------------------PNRTVKS-DALDIEELADQ---LGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGL 207 (388)
Q Consensus 153 ~~---------------------~~~~~~~-~~~dl~~~l~~---l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil 207 (388)
.. ..+...+ .++++..+++. ++. ++++++||||||.+++.++.++|+.++++++
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~ 168 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDG-ERQGITGHSMGGHGALVIALKNPDRFKSVSA 168 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCC-CceEEEEEChhHHHHHHHHHhCcccceEEEE
Confidence 10 0112233 35777777776 344 6899999999999999999999999999999
Q ss_pred ecccc
Q 016533 208 LAPVV 212 (388)
Q Consensus 208 ~~~~~ 212 (388)
+++..
T Consensus 169 ~~~~~ 173 (275)
T TIGR02821 169 FAPIV 173 (275)
T ss_pred ECCcc
Confidence 99874
No 72
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.74 E-value=3.5e-16 Score=129.21 Aligned_cols=272 Identities=14% Similarity=0.103 Sum_probs=163.3
Q ss_pred cccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCcc-ccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC
Q 016533 68 VTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHD-SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA 146 (388)
Q Consensus 68 ~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 146 (388)
..+..+.+..| .+++..+|++++ .+|++|-.|..+.+... |. .+-.+.+ +..+..+ |-|+-+|.|
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~-~kpaiiTyhDlglN~~scFq---~ff~~p~-------m~ei~~~--fcv~HV~~P 87 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKG-NKPAIITYHDLGLNHKSCFQ---GFFNFPD-------MAEILEH--FCVYHVDAP 87 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCC-CCceEEEecccccchHhHhH---HhhcCHh-------HHHHHhh--eEEEecCCC
Confidence 45667777666 499999999875 68889999999988776 44 2200000 3555554 899999999
Q ss_pred CcCCCC--CCCC---CChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCc
Q 016533 147 GYGESD--PNPN---RTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPA 221 (388)
Q Consensus 147 G~G~S~--~~~~---~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~ 221 (388)
||-.-. -+.+ .++++++++|..+++++++ +.++-+|.-.|++|..++|..||++|.|+||+++... ..
T Consensus 88 Gqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~l-k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~------a~ 160 (326)
T KOG2931|consen 88 GQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGL-KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC------AK 160 (326)
T ss_pred ccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCc-ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC------Cc
Confidence 995433 2333 3899999999999999999 7999999999999999999999999999999998642 11
Q ss_pred hhhHHHHhhcCCchhHHHHHHhhcchhh-hhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhh
Q 016533 222 NLSKEAYYQQLPQDQWAVRVAHYIPWLT-YWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYE 300 (388)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (388)
....-.+.+...............+..+ ...+.+... ....+.++.+... ........
T Consensus 161 gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~--------------~~~~diVq~Yr~~-------l~~~~N~~ 219 (326)
T KOG2931|consen 161 GWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEEL--------------GNNSDIVQEYRQH-------LGERLNPK 219 (326)
T ss_pred hHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccc--------------cccHHHHHHHHHH-------HHhcCChh
Confidence 1111111110000000000111111111 111111110 0111222211100 00000001
Q ss_pred HHHHHHH--hhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC--CCceEEEeCCCCCCcccC-CCc
Q 016533 301 SLHRDMM--VGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL--PWIHYHELSGAGHMFPFT-DGM 375 (388)
Q Consensus 301 ~~~~~~~--~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-~~~ 375 (388)
++..-+. ....+... ....+...++||+|++.|+..+.+. ....+..++ .+..+..+.++|-.+..+ |..
T Consensus 220 Nl~~fl~ayn~R~DL~~---~r~~~~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~k 294 (326)
T KOG2931|consen 220 NLALFLNAYNGRRDLSI---ERPKLGTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGK 294 (326)
T ss_pred HHHHHHHHhcCCCCccc---cCCCcCccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchH
Confidence 1111111 11111111 1111222577999999999987653 444555555 357899999999999998 999
Q ss_pred hHHHHHHhhcC
Q 016533 376 SDTIVKAVLTG 386 (388)
Q Consensus 376 ~~~~i~~fl~~ 386 (388)
+.+.++-|+++
T Consensus 295 l~ea~~~FlqG 305 (326)
T KOG2931|consen 295 LAEAFKYFLQG 305 (326)
T ss_pred HHHHHHHHHcc
Confidence 99999999976
No 73
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.73 E-value=7.9e-16 Score=127.52 Aligned_cols=112 Identities=21% Similarity=0.339 Sum_probs=95.6
Q ss_pred EEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC--CCChh
Q 016533 83 YKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP--NRTVK 160 (388)
Q Consensus 83 y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~ 160 (388)
|.... +.+++..+||-+||.+|+..+|. .+ ...+.+.|.|+|.+++||+|.++..+ .++-+
T Consensus 25 y~D~~-~~gs~~gTVv~~hGsPGSH~DFk---Yi-------------~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~ 87 (297)
T PF06342_consen 25 YEDSL-PSGSPLGTVVAFHGSPGSHNDFK---YI-------------RPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNE 87 (297)
T ss_pred EEecC-CCCCCceeEEEecCCCCCccchh---hh-------------hhHHHHcCeEEEEeCCCCCCCCCCCcccccChH
Confidence 44443 33344568999999999999999 77 66666779999999999999998655 47888
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 161 SDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 161 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
+-..-+.++++.++++++++++|||.|+-.|++++..+| ..|+++++|...
T Consensus 88 er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 88 ERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred HHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 999999999999999889999999999999999999985 679999998753
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.73 E-value=2.7e-16 Score=137.56 Aligned_cols=123 Identities=21% Similarity=0.260 Sum_probs=84.7
Q ss_pred CCcEEEEEEcCCCC--CCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCC----
Q 016533 77 DGRHLAYKEHGVPK--DNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGE---- 150 (388)
Q Consensus 77 ~g~~l~y~~~g~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~---- 150 (388)
-|..+.|..+-++. ....|+|+++||++++...|. .... +..++...|+.|+.+|..++|.
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~---~~~~----------~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFI---QKSG----------AQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHH---Hhhh----------HHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 46677887775442 134689999999999887775 3200 2456666799999999987761
Q ss_pred -CCC------CC----------------CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEe
Q 016533 151 -SDP------NP----------------NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGL 207 (388)
Q Consensus 151 -S~~------~~----------------~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil 207 (388)
+.. .. .+-.++..+.+....+.++. ++++++||||||..++.++.++|+++++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~-~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~ 173 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDT-SRASIFGHSMGGHGALTIYLKNPDKYKSVSA 173 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCC-CceEEEEEChhHHHHHHHHHhCchhEEEEEE
Confidence 110 00 00122233334444444566 6899999999999999999999999999999
Q ss_pred eccccc
Q 016533 208 LAPVVN 213 (388)
Q Consensus 208 ~~~~~~ 213 (388)
+++..+
T Consensus 174 ~~~~~~ 179 (283)
T PLN02442 174 FAPIAN 179 (283)
T ss_pred ECCccC
Confidence 998743
No 75
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.72 E-value=7.1e-17 Score=135.62 Aligned_cols=263 Identities=17% Similarity=0.159 Sum_probs=142.6
Q ss_pred CeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCcc-ccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcC
Q 016533 71 PRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHD-SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYG 149 (388)
Q Consensus 71 ~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G 149 (388)
+.+++.-| .+++...|+++ ..+|++|-.|-.|.+... |. .+-.+ +. +..+.+ .|.++-+|.|||.
T Consensus 2 h~v~t~~G-~v~V~v~G~~~-~~kp~ilT~HDvGlNh~scF~---~ff~~-~~------m~~i~~--~f~i~Hi~aPGqe 67 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPK-GNKPAILTYHDVGLNHKSCFQ---GFFNF-ED------MQEILQ--NFCIYHIDAPGQE 67 (283)
T ss_dssp EEEEETTE-EEEEEEESS---TTS-EEEEE--TT--HHHHCH---HHHCS-HH------HHHHHT--TSEEEEEE-TTTS
T ss_pred ceeccCce-EEEEEEEecCC-CCCceEEEeccccccchHHHH---HHhcc-hh------HHHHhh--ceEEEEEeCCCCC
Confidence 35666555 68999999875 368999999999988776 55 33000 11 244444 4899999999996
Q ss_pred CCC--CCCC---CChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhh
Q 016533 150 ESD--PNPN---RTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLS 224 (388)
Q Consensus 150 ~S~--~~~~---~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~ 224 (388)
.-. -+.+ .+++++++++.++++++++ +.++-+|--.||.|..++|..||++|.|+||+++... ..
T Consensus 68 ~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~l-k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~------~~--- 137 (283)
T PF03096_consen 68 EGAATLPEGYQYPSMDQLAEMLPEVLDHFGL-KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCT------AA--- 137 (283)
T ss_dssp TT-----TT-----HHHHHCTHHHHHHHHT----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----------
T ss_pred CCcccccccccccCHHHHHHHHHHHHHhCCc-cEEEEEeeccchhhhhhccccCccceeEEEEEecCCC------Cc---
Confidence 543 3333 3899999999999999999 7999999999999999999999999999999998743 11
Q ss_pred HHHHhhcCCchhHHHHHHhhcch-hhhhhcccccccchhhhhccccccChh----hHHHHhhcCCCchHHHHHHHhhchh
Q 016533 225 KEAYYQQLPQDQWAVRVAHYIPW-LTYWWNTQKWFLPSAVIAHRMDIFSRQ----DVEVLSKWSPEENNYMALARQQGEY 299 (388)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (388)
.|..+....+-. .+. ...+ ............+... ..+.++.+.. ........
T Consensus 138 -----------gw~Ew~~~K~~~~~L~---~~gm-t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~-------~l~~~~Np 195 (283)
T PF03096_consen 138 -----------GWMEWFYQKLSSWLLY---SYGM-TSSVKDYLLWHYFGKEEEENNSDLVQTYRQ-------HLDERINP 195 (283)
T ss_dssp ------------HHHHHHHHHH----------CT-TS-HHHHHHHHHS-HHHHHCT-HHHHHHHH-------HHHT-TTH
T ss_pred -----------cHHHHHHHHHhccccc---cccc-ccchHHhhhhcccccccccccHHHHHHHHH-------HHhcCCCH
Confidence 122111111100 000 0000 0000000000111111 1111111100 00000000
Q ss_pred hHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC--CCceEEEeCCCCCCcccC-CCch
Q 016533 300 ESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL--PWIHYHELSGAGHMFPFT-DGMS 376 (388)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-~~~~ 376 (388)
.++..-+... ..+.++....+...||+|++.|+..+.. +.+..+..++ .+.++..++++|=++..| |+.+
T Consensus 196 ~Nl~~f~~sy-----~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~kl 268 (283)
T PF03096_consen 196 KNLALFLNSY-----NSRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKL 268 (283)
T ss_dssp HHHHHHHHHH-----HT-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHH
T ss_pred HHHHHHHHHH-----hccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHH
Confidence 1111111110 1122555555666799999999998775 3455666666 356899999999999999 9999
Q ss_pred HHHHHHhhcC
Q 016533 377 DTIVKAVLTG 386 (388)
Q Consensus 377 ~~~i~~fl~~ 386 (388)
.+.++-||++
T Consensus 269 aea~~lFlQG 278 (283)
T PF03096_consen 269 AEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHcc
Confidence 9999999975
No 76
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.71 E-value=2.3e-16 Score=152.31 Aligned_cols=232 Identities=16% Similarity=0.083 Sum_probs=141.1
Q ss_pred ccccCeEEcCCCcEEEEEEcCCCCCCC---CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEe
Q 016533 67 AVTAPRIKLRDGRHLAYKEHGVPKDNA---KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSY 143 (388)
Q Consensus 67 ~~~~~~~~~~~g~~l~y~~~g~~~~~~---~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 143 (388)
..+...+...||.+++++...++..++ -|+||++||.+.....|.+. .. ...+...||.|+.+
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~-~~-------------~q~~~~~G~~V~~~ 429 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFN-PE-------------IQVLASAGYAVLAP 429 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccc-hh-------------hHHHhcCCeEEEEe
Confidence 345557777799999998887654332 27999999998666554310 22 34444559999999
Q ss_pred CCCCcCC---C--C----CCCCCChhhHHHHHHHHHHHhCC--CCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 144 DRAGYGE---S--D----PNPNRTVKSDALDIEELADQLGV--GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 144 D~~G~G~---S--~----~~~~~~~~~~~~dl~~~l~~l~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
++||-+. . + .......+|+.+.+. +++..+. .+++.++|||+||.+++..+.+.| .+++.+...+..
T Consensus 430 n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~ 507 (620)
T COG1506 430 NYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGV 507 (620)
T ss_pred CCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcc
Confidence 9997543 2 1 111235555555555 4444433 259999999999999999999988 677776666654
Q ss_pred ccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHH
Q 016533 213 NYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMAL 292 (388)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (388)
+. ......... .+....... ...... +.+.+...
T Consensus 508 ~~-----------------------~~~~~~~~~---------~~~~~~~~~--~~~~~~--~~~~~~~~---------- 541 (620)
T COG1506 508 DW-----------------------LLYFGESTE---------GLRFDPEEN--GGGPPE--DREKYEDR---------- 541 (620)
T ss_pred hh-----------------------hhhccccch---------hhcCCHHHh--CCCccc--ChHHHHhc----------
Confidence 31 000000000 000000000 000000 01111100
Q ss_pred HHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC----CCceEEEeCCCCCC
Q 016533 293 ARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL----PWIHYHELSGAGHM 368 (388)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~----~~~~~~~i~~~gH~ 368 (388)
.--.-..++++|+|+|||++|..+|.+.+..+.+.+ .+++++++|+.+|.
T Consensus 542 --------------------------sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 542 --------------------------SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred --------------------------ChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 001123457777999999999999999988888776 35789999999998
Q ss_pred cccC--CCchHHHHHHhhcC
Q 016533 369 FPFT--DGMSDTIVKAVLTG 386 (388)
Q Consensus 369 ~~~e--~~~~~~~i~~fl~~ 386 (388)
+... ...+.+.+.+|+++
T Consensus 596 ~~~~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 596 FSRPENRVKVLKEILDWFKR 615 (620)
T ss_pred CCCchhHHHHHHHHHHHHHH
Confidence 8763 44466666667653
No 77
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=4.7e-16 Score=126.42 Aligned_cols=222 Identities=11% Similarity=0.056 Sum_probs=138.3
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCC-CCCCCChhhHHHHHHHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESD-PNPNRTVKSDALDIEELAD 171 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~-~~~~~~~~~~~~dl~~~l~ 171 (388)
.+..++++|-.|+++..|. .+ ...+.. .+.++++++||+|.-- .+.-.+++++++.+...+.
T Consensus 6 ~~~~L~cfP~AGGsa~~fr---~W------------~~~lp~--~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~ 68 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFR---SW------------SRRLPA--DIELLAVQLPGRGDRFGEPLLTDIESLADELANELL 68 (244)
T ss_pred CCceEEEecCCCCCHHHHH---HH------------HhhCCc--hhheeeecCCCcccccCCcccccHHHHHHHHHHHhc
Confidence 4678999999999999988 66 444444 3799999999999764 4445789999999888887
Q ss_pred HhCCCCcEEEEEecccHHHHHHHHHhCCc---ccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchh
Q 016533 172 QLGVGSKFYVIGYSMGGHPIWGCLKYIPH---RLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWL 248 (388)
Q Consensus 172 ~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (388)
..-.+.++.++||||||++|.++|.+... ...++.+.+..... .... ..+ ....
T Consensus 69 ~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~----~~~~---~~i-~~~~--------------- 125 (244)
T COG3208 69 PPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPH----YDRG---KQI-HHLD--------------- 125 (244)
T ss_pred cccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCC----Cccc---CCc-cCCC---------------
Confidence 42233799999999999999999987421 25666666654210 0000 000 0000
Q ss_pred hhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHH-HHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCC
Q 016533 249 TYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMA-LARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNN 327 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i 327 (388)
...-.+.+..+.-.+..... ..........+..+.... ..| ... +-..+
T Consensus 126 -----------------------D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~-e~Y-----~~~-~~~pl 175 (244)
T COG3208 126 -----------------------DADFLADLVDLGGTPPELLEDPELMALFLPILRADFRAL-ESY-----RYP-PPAPL 175 (244)
T ss_pred -----------------------HHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHh-ccc-----ccC-CCCCc
Confidence 00001111111111100000 001111111222222211 111 111 22458
Q ss_pred CccEEEEecCCCCCCcHHHHHHHHHhCC-CceEEEeCCCCCCcccC-CCchHHHHHHhhc
Q 016533 328 EGSVHLWHGDEDRLVPVILQRYIVQRLP-WIHYHELSGAGHMFPFT-DGMSDTIVKAVLT 385 (388)
Q Consensus 328 ~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 385 (388)
+||+.++.|++|..+..+....+.+... ..++++++| ||+...+ .+++.+.|.+.+.
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 8889999999999999999998888886 678999986 9999999 8888888887774
No 78
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.67 E-value=3.8e-16 Score=131.45 Aligned_cols=184 Identities=16% Similarity=0.144 Sum_probs=111.0
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCCC-----CCCCChhhHHHHHHHHHHHh------CCCCcEEEEEecccHHHHHHHHHh
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESDP-----NPNRTVKSDALDIEELADQL------GVGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~~-----~~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
...++.+.||.|+.+|+||.+.... .........++|+.+.++.+ +. +++.++|||+||.+++.++..
T Consensus 6 ~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~-~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 6 NAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDP-DRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEE-EEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccc-eeEEEEcccccccccchhhcc
Confidence 3566666699999999999875321 11223334566666666655 23 799999999999999999999
Q ss_pred CCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHH
Q 016533 198 IPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVE 277 (388)
Q Consensus 198 ~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (388)
+|+++++++..++..+.... .... ..+....... ... .....+
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~--~~~~--------------------------------~~~~~~~~~~-~~~--~~~~~~ 127 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSY--YGTT--------------------------------DIYTKAEYLE-YGD--PWDNPE 127 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCS--BHHT--------------------------------CCHHHGHHHH-HSS--TTTSHH
T ss_pred cceeeeeeeccceecchhcc--cccc--------------------------------cccccccccc-cCc--cchhhh
Confidence 99999999999987642100 0000 0000000000 000 000000
Q ss_pred HHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCC--CCccEEEEecCCCCCCcHHHHHHHHHhC-
Q 016533 278 VLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPN--NEGSVHLWHGDEDRLVPVILQRYIVQRL- 354 (388)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--i~~Pvlii~G~~D~~~p~~~~~~~~~~~- 354 (388)
.+.. .... .++.+ +++|+|++||++|..||++.+..+.+.+
T Consensus 128 ~~~~------------------------~s~~------------~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~ 171 (213)
T PF00326_consen 128 FYRE------------------------LSPI------------SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALR 171 (213)
T ss_dssp HHHH------------------------HHHG------------GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHH
T ss_pred hhhh------------------------hccc------------cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHH
Confidence 0000 0000 01112 5567999999999999999888877766
Q ss_pred ---CCceEEEeCCCCCCcccC--CCchHHHHHHhhcC
Q 016533 355 ---PWIHYHELSGAGHMFPFT--DGMSDTIVKAVLTG 386 (388)
Q Consensus 355 ---~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~~ 386 (388)
.+++++++|++||..... ...+.+.+.+||++
T Consensus 172 ~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 172 KAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDK 208 (213)
T ss_dssp HTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHH
Confidence 347899999999966543 55677778888763
No 79
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.66 E-value=1.8e-15 Score=133.97 Aligned_cols=131 Identities=17% Similarity=0.196 Sum_probs=85.1
Q ss_pred CccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC
Q 016533 66 PAVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR 145 (388)
Q Consensus 66 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 145 (388)
.++++..|...+ .+|..+.+-+..+.+.|+||++.|+.+-...+. .+ +...+..+|+.++++|.
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~---~l------------~~~~l~~rGiA~LtvDm 226 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLY---RL------------FRDYLAPRGIAMLTVDM 226 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESSSSS-EEEEEEE--TTS-GGGGH---HH------------HHCCCHHCT-EEEEE--
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHH---HH------------HHHHHHhCCCEEEEEcc
Confidence 445666777755 566654444444455678888888888777665 33 34444556999999999
Q ss_pred CCcCCCCCCC-CCChhhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 146 AGYGESDPNP-NRTVKSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 146 ~G~G~S~~~~-~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
||.|.|...+ ..+.+.+.+.|.+.+... +. .+|.++|.|+||++|.++|..+++||+++|..++.+.
T Consensus 227 PG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~-~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 227 PGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDH-TRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEE-EEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred CCCcccccCCCCcCHHHHHHHHHHHHhcCCccCh-hheEEEEeccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 9999986432 223345566666666554 33 6999999999999999999998999999999999754
No 80
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.65 E-value=1.6e-14 Score=132.95 Aligned_cols=135 Identities=11% Similarity=0.049 Sum_probs=96.0
Q ss_pred cccCeEEcCCCcEEEEEEcCCCC-CCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC
Q 016533 68 VTAPRIKLRDGRHLAYKEHGVPK-DNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA 146 (388)
Q Consensus 68 ~~~~~~~~~~g~~l~y~~~g~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 146 (388)
.+...+...++. +..+.+.+.. ..-+.+||+++.+....+.++ +.|.-+. +..+.+ .||+|+++||+
T Consensus 189 ~TPg~VV~~n~l-~eLiqY~P~te~v~~~PLLIVPp~INK~YIlD----L~P~~Sl------Vr~lv~-qG~~VflIsW~ 256 (560)
T TIGR01839 189 TTEGAVVFRNEV-LELIQYKPITEQQHARPLLVVPPQINKFYIFD----LSPEKSF------VQYCLK-NQLQVFIISWR 256 (560)
T ss_pred CCCCceeEECCc-eEEEEeCCCCCCcCCCcEEEechhhhhhheee----cCCcchH------HHHHHH-cCCeEEEEeCC
Confidence 344455544442 3444443322 234789999999997777775 2232222 455555 59999999999
Q ss_pred CcCCCCCCCCCChhhHHHHHHHHHHHh----CCCCcEEEEEecccHHHHHH----HHHhCCc-ccceeEeeccccccCCC
Q 016533 147 GYGESDPNPNRTVKSDALDIEELADQL----GVGSKFYVIGYSMGGHPIWG----CLKYIPH-RLAGAGLLAPVVNYWWP 217 (388)
Q Consensus 147 G~G~S~~~~~~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~----~a~~~p~-~v~~lil~~~~~~~~~~ 217 (388)
+-+..+ ...+++++++.+.+.++.+ +. +++.++|||+||.+++. +++++++ +|++++++.+..++..+
T Consensus 257 nP~~~~--r~~~ldDYv~~i~~Ald~V~~~tG~-~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~ 333 (560)
T TIGR01839 257 NPDKAH--REWGLSTYVDALKEAVDAVRAITGS-RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTME 333 (560)
T ss_pred CCChhh--cCCCHHHHHHHHHHHHHHHHHhcCC-CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCC
Confidence 876654 3468899998888777765 45 79999999999999997 7888886 89999999998886443
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.65 E-value=5.1e-15 Score=124.20 Aligned_cols=107 Identities=17% Similarity=0.236 Sum_probs=75.9
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCC-------CChhhHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPN-------RTVKSDALD 165 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~d 165 (388)
..|.||++||.+++...+. .... +..++++.||.|+++|++|++.+..... ........+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~---~~~~----------~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYV---IDWG----------WKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred CCCEEEEeCCCCCCHHHHh---hhcC----------hHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 4789999999998877664 2100 3566777799999999999875432100 011123444
Q ss_pred HHHHHHHh----CCC-CcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 166 IEELADQL----GVG-SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 166 l~~~l~~l----~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
+..+++.+ +++ ++++|+|||+||.+++.++..+|+.+.+++.+++..
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 44444433 332 589999999999999999999999999999988753
No 82
>PLN00021 chlorophyllase
Probab=99.60 E-value=2.1e-14 Score=126.31 Aligned_cols=113 Identities=16% Similarity=0.111 Sum_probs=77.3
Q ss_pred EEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChh
Q 016533 81 LAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVK 160 (388)
Q Consensus 81 l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 160 (388)
+.+..+-+......|+|||+||++.+...|. .+ ...+.+ +||.|+++|++|++.+.. ...++
T Consensus 39 ~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~---~l------------~~~Las-~G~~VvapD~~g~~~~~~--~~~i~ 100 (313)
T PLN00021 39 KPLLVATPSEAGTYPVLLFLHGYLLYNSFYS---QL------------LQHIAS-HGFIVVAPQLYTLAGPDG--TDEIK 100 (313)
T ss_pred ceEEEEeCCCCCCCCEEEEECCCCCCcccHH---HH------------HHHHHh-CCCEEEEecCCCcCCCCc--hhhHH
Confidence 4444443333344689999999999988887 66 566554 599999999998754321 11222
Q ss_pred ---hHHHHHHHHHHH-------hCCCCcEEEEEecccHHHHHHHHHhCCc-----ccceeEeecccc
Q 016533 161 ---SDALDIEELADQ-------LGVGSKFYVIGYSMGGHPIWGCLKYIPH-----RLAGAGLLAPVV 212 (388)
Q Consensus 161 ---~~~~dl~~~l~~-------l~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lil~~~~~ 212 (388)
+..+.+.+.++. .+. ++++++|||+||.+++.+|..+++ +++++|+++|..
T Consensus 101 d~~~~~~~l~~~l~~~l~~~~~~d~-~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 101 DAAAVINWLSSGLAAVLPEGVRPDL-SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred HHHHHHHHHHhhhhhhcccccccCh-hheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 222223322222 233 689999999999999999998874 689999999863
No 83
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.58 E-value=8.2e-14 Score=133.37 Aligned_cols=124 Identities=17% Similarity=0.078 Sum_probs=95.6
Q ss_pred EcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCc---cccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCC
Q 016533 74 KLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRH---DSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGE 150 (388)
Q Consensus 74 ~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~ 150 (388)
+..||.+|++..+.+...++.|+||++||++.+.. .+. .. ....+.+.||.|+++|+||+|.
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~---~~------------~~~~l~~~Gy~vv~~D~RG~g~ 66 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLD---KT------------EPAWFVAQGYAVVIQDTRGRGA 66 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccc---cc------------cHHHHHhCCcEEEEEecccccc
Confidence 45689999988776543345789999999997653 222 11 2344445599999999999999
Q ss_pred CCCCCC-CChhhHHHHHHHHHHHhCC----CCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 151 SDPNPN-RTVKSDALDIEELADQLGV----GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 151 S~~~~~-~~~~~~~~dl~~~l~~l~~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
|+.... .+ ...++|+.++++.+.. +.++.++|||+||.+++.+|..+|+++++++..++..+
T Consensus 67 S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 67 SEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred CCCceEecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 986432 23 6788888888887732 25899999999999999999999999999999988754
No 84
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.57 E-value=2.4e-14 Score=114.35 Aligned_cols=161 Identities=19% Similarity=0.184 Sum_probs=104.2
Q ss_pred EEEEccCCCCC-ccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCC
Q 016533 97 IFFVHGFDSCR-HDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGV 175 (388)
Q Consensus 97 vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~ 175 (388)
|+++||++++. ..|. .. ...-+... ++|-..|+ ...+.+++.+.+.+.++.++
T Consensus 1 v~IvhG~~~s~~~HW~---~w------------l~~~l~~~-~~V~~~~~---------~~P~~~~W~~~l~~~i~~~~- 54 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQ---PW------------LERQLENS-VRVEQPDW---------DNPDLDEWVQALDQAIDAID- 54 (171)
T ss_dssp EEEE--TTSSTTTSTH---HH------------HHHHHTTS-EEEEEC-----------TS--HHHHHHHHHHCCHC-T-
T ss_pred CEEeCCCCCCCccHHH---HH------------HHHhCCCC-eEEecccc---------CCCCHHHHHHHHHHHHhhcC-
Confidence 68999999775 4565 44 45555543 67777666 22377888888888888664
Q ss_pred CCcEEEEEecccHHHHHHHH-HhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcc
Q 016533 176 GSKFYVIGYSMGGHPIWGCL-KYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNT 254 (388)
Q Consensus 176 ~~~~~lvGhS~Gg~ia~~~a-~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (388)
++++|||||+|+..++.++ .....+|++++|++|+.. .. . .
T Consensus 55 -~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~-------~~--~----------------~------------ 96 (171)
T PF06821_consen 55 -EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDP-------DD--P----------------E------------ 96 (171)
T ss_dssp -TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SC-------GC--H----------------H------------
T ss_pred -CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCc-------cc--c----------------c------------
Confidence 5799999999999999999 777889999999999621 00 0 0
Q ss_pred cccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEE
Q 016533 255 QKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLW 334 (388)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii 334 (388)
... ..+. . -...|.....+|.++|
T Consensus 97 -~~~----------~~~~--------~-------------------------------------f~~~p~~~l~~~~~vi 120 (171)
T PF06821_consen 97 -PFP----------PELD--------G-------------------------------------FTPLPRDPLPFPSIVI 120 (171)
T ss_dssp -CCT----------CGGC--------C-------------------------------------CTTSHCCHHHCCEEEE
T ss_pred -chh----------hhcc--------c-------------------------------------cccCcccccCCCeEEE
Confidence 000 0000 0 0011222233448999
Q ss_pred ecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHH
Q 016533 335 HGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDT 378 (388)
Q Consensus 335 ~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~ 378 (388)
.+++|+++|.+.++.+++.+ +++++.++++||+...+ -..+.+
T Consensus 121 aS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~G~~~~p~ 164 (171)
T PF06821_consen 121 ASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAASGFGPWPE 164 (171)
T ss_dssp EETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGGTHSS-HH
T ss_pred EcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCcccccCCCchHH
Confidence 99999999999999999998 79999999999998776 444433
No 85
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.57 E-value=3.1e-13 Score=121.11 Aligned_cols=258 Identities=10% Similarity=0.070 Sum_probs=146.9
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCC-CCCCCChhhHHHHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESD-PNPNRTVKSDALDIEELADQ 172 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~-~~~~~~~~~~~~dl~~~l~~ 172 (388)
.++||++..+.+...... ..+ +..++. |++|+..||.--+..+ ....++++++++-+.+++++
T Consensus 102 ~~pvLiV~Pl~g~~~~L~--RS~------------V~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~ 165 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLL--RST------------VEALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRF 165 (406)
T ss_pred CCcEEEEcCCchHHHHHH--HHH------------HHHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHH
Confidence 379999998886555443 234 566766 8999999998666553 23356999999999999999
Q ss_pred hCCCCcEEEEEecccHHHHHHHHHhC-----CcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHH-h---
Q 016533 173 LGVGSKFYVIGYSMGGHPIWGCLKYI-----PHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVA-H--- 243 (388)
Q Consensus 173 l~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 243 (388)
+|. + ++++|+|+||..++.+++.+ |+++++++++++.+++... |. ....+... ....|..... .
T Consensus 166 ~G~-~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~--p~--~v~~~a~~-~~i~~~~~~~i~~vp 238 (406)
T TIGR01849 166 LGP-D-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARAS--PT--VVNELARE-KPIEWFQHNVIMRVP 238 (406)
T ss_pred hCC-C-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCC--Cc--hHHHHhhc-ccHHHHHHHhhhccC
Confidence 986 4 99999999999977766654 6679999999998875421 11 11111110 0111111110 0
Q ss_pred ---------hcchhhhhhcccccccchhhhhccccccChhhHHHHhhcC-----------------CCchHHHHHHHhhc
Q 016533 244 ---------YIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWS-----------------PEENNYMALARQQG 297 (388)
Q Consensus 244 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~ 297 (388)
..|...... . +...++........+.+..+. ........... ..
T Consensus 239 ~~~~g~gr~v~PG~~~~~----~-----F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y-~~ 308 (406)
T TIGR01849 239 FPYPGAGRLVYPGFLQLA----G-----FISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFY-LQ 308 (406)
T ss_pred ccccCCCCcccCHHHHHH----H-----HHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHH-HH
Confidence 111111100 0 000000000011111111111 00000000000 11
Q ss_pred hhhHHHHHHHhhccCcCCCCCCCCCCCCCCC-ccEEEEecCCCCCCcHHHHHHHHHhC---C--CceEEEeCCCCCCccc
Q 016533 298 EYESLHRDMMVGFGTWEFDPLDLKNPFPNNE-GSVHLWHGDEDRLVPVILQRYIVQRL---P--WIHYHELSGAGHMFPF 371 (388)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~-~Pvlii~G~~D~~~p~~~~~~~~~~~---~--~~~~~~i~~~gH~~~~ 371 (388)
....++.+.......+.. ..-...+.+|+ +|+|.+.|++|.++|++.++.+.+.+ + +.+.++.+++||+..+
T Consensus 309 ~v~~vf~~n~L~~G~l~v--~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf 386 (406)
T TIGR01849 309 TIDVVFQQFLLPQGKFIV--EGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVF 386 (406)
T ss_pred HHHHHHHhCCccCCcEEE--CCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEe
Confidence 111111111111122211 12234566788 89999999999999999999998874 4 3457777789999887
Q ss_pred C----CCchHHHHHHhhcC
Q 016533 372 T----DGMSDTIVKAVLTG 386 (388)
Q Consensus 372 e----~~~~~~~i~~fl~~ 386 (388)
. ++++...|.+||..
T Consensus 387 ~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 387 SGSRFREEIYPLVREFIRR 405 (406)
T ss_pred eChhhhhhhchHHHHHHHh
Confidence 5 66778889999875
No 86
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.57 E-value=1.7e-13 Score=106.59 Aligned_cols=177 Identities=16% Similarity=0.112 Sum_probs=118.4
Q ss_pred CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhh--HHHHHHHH
Q 016533 92 NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKS--DALDIEEL 169 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~--~~~dl~~~ 169 (388)
+..|..|++|.-+....... +.+ ++. +.+.+.++||.++.+|+||.|.|...-+..+-+ .+..+.++
T Consensus 26 ~~~~iAli~HPHPl~gGtm~--nkv---v~~------la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW 94 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMN--NKV---VQT------LARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDW 94 (210)
T ss_pred CCCceEEecCCCccccCccC--CHH---HHH------HHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHH
Confidence 55788889986553222222 011 000 355566679999999999999998766543332 23334444
Q ss_pred HHHhCCCCcE-EEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchh
Q 016533 170 ADQLGVGSKF-YVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWL 248 (388)
Q Consensus 170 l~~l~~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (388)
++....+.+. .+.|+|+|++|++.+|.+.|+ +...+.+.|..+.
T Consensus 95 ~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~---------------------------------- 139 (210)
T COG2945 95 LQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA---------------------------------- 139 (210)
T ss_pred HHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc----------------------------------
Confidence 5544443333 689999999999999999875 4455555553210
Q ss_pred hhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCC
Q 016533 249 TYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNE 328 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~ 328 (388)
..+. . ...+|
T Consensus 140 --------------------~dfs-------------------------------------------~--l~P~P----- 149 (210)
T COG2945 140 --------------------YDFS-------------------------------------------F--LAPCP----- 149 (210)
T ss_pred --------------------hhhh-------------------------------------------h--ccCCC-----
Confidence 0000 0 11123
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccCCCchHHHHHHhhc
Q 016533 329 GSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFTDGMSDTIVKAVLT 385 (388)
Q Consensus 329 ~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~~~~~~~i~~fl~ 385 (388)
+|+++|+|+.|.+++....-++++. ...+++++++++||.+..-..+.+.|.+|+.
T Consensus 150 ~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 150 SPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred CCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 3499999999999998888887777 4578899999999998887778899999884
No 87
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.56 E-value=2.5e-14 Score=120.35 Aligned_cols=178 Identities=24% Similarity=0.325 Sum_probs=101.7
Q ss_pred CCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHH-HHHhCeEEEEeCCCC------cCC---CCC-----
Q 016533 89 PKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEV-IEDLGVYIVSYDRAG------YGE---SDP----- 153 (388)
Q Consensus 89 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~vi~~D~~G------~G~---S~~----- 153 (388)
+.++..+.||++||+|++...+. .+ ..+ .......+++++-+- .|. +--
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~---~~-------------~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~ 72 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFA---LL-------------AELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDF 72 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHH---HH-------------HHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCS
T ss_pred CCCCCceEEEEECCCCCCcchhH---HH-------------HhhcccCCceEEEeccCCCCCcccccccCCCceeeccCC
Confidence 33355889999999999996655 33 221 112246777766542 222 110
Q ss_pred CCC-----CChhhHHHHHHHHHHHh---CC-CCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhh
Q 016533 154 NPN-----RTVKSDALDIEELADQL---GV-GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLS 224 (388)
Q Consensus 154 ~~~-----~~~~~~~~dl~~~l~~l---~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~ 224 (388)
... ..+++.++.+.++++.. ++ .++++|+|+|+||.+++.++.++|+.+.++|.+++.... .
T Consensus 73 ~~~~~~~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~-------~-- 143 (216)
T PF02230_consen 73 DPEGPEDEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP-------E-- 143 (216)
T ss_dssp SSSSEB-HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT-------G--
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc-------c--
Confidence 010 12233344455555532 22 268999999999999999999999999999999986310 0
Q ss_pred HHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHH
Q 016533 225 KEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHR 304 (388)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (388)
....
T Consensus 144 --------------------------------------------~~~~-------------------------------- 147 (216)
T PF02230_consen 144 --------------------------------------------SELE-------------------------------- 147 (216)
T ss_dssp --------------------------------------------CCCH--------------------------------
T ss_pred --------------------------------------------cccc--------------------------------
Confidence 0000
Q ss_pred HHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC----CCceEEEeCCCCCCcccCCCchHHHH
Q 016533 305 DMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL----PWIHYHELSGAGHMFPFTDGMSDTIV 380 (388)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~~~~~~~i 380 (388)
....... +.|++++||++|+++|.+.++...+.+ .+++++.+++.||.+..+ ..+.+
T Consensus 148 ----------~~~~~~~------~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~---~~~~~ 208 (216)
T PF02230_consen 148 ----------DRPEALA------KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISPE---ELRDL 208 (216)
T ss_dssp ----------CCHCCCC------TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--HH---HHHHH
T ss_pred ----------ccccccC------CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCHH---HHHHH
Confidence 0000111 345999999999999998877766665 357899999999977654 45556
Q ss_pred HHhhcC
Q 016533 381 KAVLTG 386 (388)
Q Consensus 381 ~~fl~~ 386 (388)
.+||++
T Consensus 209 ~~~l~~ 214 (216)
T PF02230_consen 209 REFLEK 214 (216)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 666653
No 88
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.56 E-value=5.5e-14 Score=118.63 Aligned_cols=175 Identities=18% Similarity=0.171 Sum_probs=108.4
Q ss_pred CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC-CC-----------Ch
Q 016533 92 NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP-NR-----------TV 159 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~-----------~~ 159 (388)
.+.|.||++|++.|-..... .+ ...+. +.||.|+++|+-+-....... .. ..
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~---~~------------ad~lA-~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIR---DL------------ADRLA-EEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRP 75 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHH---HH------------HHHHH-HTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSH
T ss_pred CCCCEEEEEcCCCCCchHHH---HH------------HHHHH-hcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhH
Confidence 35789999999888765544 44 45554 459999999986543311111 00 13
Q ss_pred hhHHHHHHHHHHHhCC-----CCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCc
Q 016533 160 KSDALDIEELADQLGV-----GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQ 234 (388)
Q Consensus 160 ~~~~~dl~~~l~~l~~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (388)
+...+++.+.++.+.- .+++.++|+|+||.+++.++... +.+++++..-|...
T Consensus 76 ~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~--------------------- 133 (218)
T PF01738_consen 76 EQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP--------------------- 133 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS---------------------
T ss_pred HHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC---------------------
Confidence 4556777777777622 25999999999999999999886 68888888776210
Q ss_pred hhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcC
Q 016533 235 DQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWE 314 (388)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (388)
.....+
T Consensus 134 -------------------------------------~~~~~~------------------------------------- 139 (218)
T PF01738_consen 134 -------------------------------------PPPPLE------------------------------------- 139 (218)
T ss_dssp -------------------------------------GGGHHH-------------------------------------
T ss_pred -------------------------------------CCcchh-------------------------------------
Confidence 000000
Q ss_pred CCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhC----CCceEEEeCCCCCCcccC-CC--------chHHHHH
Q 016533 315 FDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRL----PWIHYHELSGAGHMFPFT-DG--------MSDTIVK 381 (388)
Q Consensus 315 ~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e-~~--------~~~~~i~ 381 (388)
...++++|+++++|++|+.++.+..+.+.+.+ ...++++++|++|.+... .+ ...+.+.
T Consensus 140 --------~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~ 211 (218)
T PF01738_consen 140 --------DAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTL 211 (218)
T ss_dssp --------HGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHH
T ss_pred --------hhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHH
Confidence 01123445999999999999998766666555 567999999999988876 33 2344566
Q ss_pred HhhcC
Q 016533 382 AVLTG 386 (388)
Q Consensus 382 ~fl~~ 386 (388)
+||++
T Consensus 212 ~ff~~ 216 (218)
T PF01738_consen 212 AFFKR 216 (218)
T ss_dssp HHHCC
T ss_pred HHHHh
Confidence 67654
No 89
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.56 E-value=4e-14 Score=128.17 Aligned_cols=105 Identities=14% Similarity=0.164 Sum_probs=80.8
Q ss_pred CCceEEEEccCCCCC--cccccccc-CCCCCccccccCchHHHHHHh-CeEEEEeCCCCcCCCCCCC-CCChhhHHHHHH
Q 016533 93 AKYKIFFVHGFDSCR--HDSAVANF-LSPFMPILWCGGIYQEVIEDL-GVYIVSYDRAGYGESDPNP-NRTVKSDALDIE 167 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~-~~~~~~~~~dl~ 167 (388)
.+|++|++||++++. ..|. . + ...+.... +|+||++|++|+|.|..+. .......++++.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~---~~l------------~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la 104 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWV---PKL------------VAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVA 104 (442)
T ss_pred CCCeEEEECCCCcCCcchhhH---HHH------------HHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHH
Confidence 378999999999754 3344 2 2 23443222 5999999999999886443 234466777788
Q ss_pred HHHHHh------CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 168 ELADQL------GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 168 ~~l~~l------~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
++++.+ ++ ++++||||||||++|..++..+|++|.++++++|...
T Consensus 105 ~lI~~L~~~~gl~l-~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 105 KFVNWMQEEFNYPW-DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHhhCCCC-CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 877765 35 7999999999999999999999999999999999753
No 90
>PRK10162 acetyl esterase; Provisional
Probab=99.55 E-value=9e-13 Score=117.39 Aligned_cols=127 Identities=13% Similarity=0.137 Sum_probs=84.7
Q ss_pred cccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCC---CCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeC
Q 016533 68 VTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFD---SCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYD 144 (388)
Q Consensus 68 ~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 144 (388)
.+...+...+| .+..+.+.+. ....|+||++||.+ ++...|. .+ ...+..+.|+.|+++|
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~-~~~~p~vv~~HGGg~~~g~~~~~~---~~------------~~~la~~~g~~Vv~vd 119 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQ-PDSQATLFYLHGGGFILGNLDTHD---RI------------MRLLASYSGCTVIGID 119 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCC-CCCCCEEEEEeCCcccCCCchhhh---HH------------HHHHHHHcCCEEEEec
Confidence 34445665555 4666666543 23468999999987 5555666 55 6777776799999999
Q ss_pred CCCcCCCCCCCCCChhhH---HHHHHHHHHHhCCC-CcEEEEEecccHHHHHHHHHhC------CcccceeEeeccccc
Q 016533 145 RAGYGESDPNPNRTVKSD---ALDIEELADQLGVG-SKFYVIGYSMGGHPIWGCLKYI------PHRLAGAGLLAPVVN 213 (388)
Q Consensus 145 ~~G~G~S~~~~~~~~~~~---~~dl~~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lil~~~~~~ 213 (388)
+|...+...+ ...++. .+.+.+..+.++++ ++++|+|+|+||.+++.++... +.++++++++.|..+
T Consensus 120 Yrlape~~~p--~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 120 YTLSPEARFP--QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred CCCCCCCCCC--CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 9965543211 123332 22333333445542 6899999999999999998753 357899999998754
No 91
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.53 E-value=2e-14 Score=124.68 Aligned_cols=122 Identities=15% Similarity=0.145 Sum_probs=86.9
Q ss_pred EEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCC-ccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCC
Q 016533 73 IKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCR-HDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGES 151 (388)
Q Consensus 73 ~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 151 (388)
+...++..+.+..+.+ .+|++|++||+.++. ..|. .. +...++...+|+|+++|++|++.+
T Consensus 19 ~~~~~~~~~~~~~f~~----~~p~vilIHG~~~~~~~~~~---~~-----------l~~~ll~~~~~nVi~vD~~~~~~~ 80 (275)
T cd00707 19 LFADDPSSLKNSNFNP----SRPTRFIIHGWTSSGEESWI---SD-----------LRKAYLSRGDYNVIVVDWGRGANP 80 (275)
T ss_pred ecCCChhhhhhcCCCC----CCCcEEEEcCCCCCCCCcHH---HH-----------HHHHHHhcCCCEEEEEECcccccc
Confidence 3333455566665643 378999999999887 5554 22 023455545799999999998433
Q ss_pred CCCC-CCChhhHHHHHHHHHHHh------CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 152 DPNP-NRTVKSDALDIEELADQL------GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 152 ~~~~-~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
.... ..+.+.+.+++..+++.+ +. +++++|||||||.++..++..+|++|+++++++|...
T Consensus 81 ~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~-~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 81 NYPQAVNNTRVVGAELAKFLDFLVDNTGLSL-ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred ChHHHHHhHHHHHHHHHHHHHHHHHhcCCCh-HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 2111 124555566666666654 34 6899999999999999999999999999999998753
No 92
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.51 E-value=1.5e-12 Score=116.50 Aligned_cols=136 Identities=18% Similarity=0.212 Sum_probs=106.1
Q ss_pred CCccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeC
Q 016533 65 GPAVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYD 144 (388)
Q Consensus 65 ~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 144 (388)
+.+.++..+++.||.-+.......+. .++|+|++.||+.+++..|. ...| +.+.+-++.+.||+|..-+
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~~-~~rp~Vll~HGLl~sS~~Wv---~n~p-------~~sLaf~LadaGYDVWLgN 113 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRGK-KKRPVVLLQHGLLASSSSWV---LNGP-------EQSLAFLLADAGYDVWLGN 113 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCCC-CCCCcEEEeeccccccccce---ecCc-------cccHHHHHHHcCCceeeec
Confidence 67889999999999977777664443 56899999999999999998 4422 2235778888899999999
Q ss_pred CCCcCCCCCCC-----------CCChhhHHH-HHHHHHHH----hCCCCcEEEEEecccHHHHHHHHHhCCc---cccee
Q 016533 145 RAGYGESDPNP-----------NRTVKSDAL-DIEELADQ----LGVGSKFYVIGYSMGGHPIWGCLKYIPH---RLAGA 205 (388)
Q Consensus 145 ~~G~G~S~~~~-----------~~~~~~~~~-dl~~~l~~----l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~l 205 (388)
.||--.|.... .+++++++. ||-+.|++ -+. ++++.+|||.|+.....++...|+ +|+.+
T Consensus 114 ~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~-~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~ 192 (403)
T KOG2624|consen 114 NRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ-EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSF 192 (403)
T ss_pred CcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccc-cceEEEEEEccchhheehhcccchhhhhhhee
Confidence 99977775211 135555544 55555554 466 799999999999999999888765 79999
Q ss_pred Eeecccc
Q 016533 206 GLLAPVV 212 (388)
Q Consensus 206 il~~~~~ 212 (388)
++++|..
T Consensus 193 ~aLAP~~ 199 (403)
T KOG2624|consen 193 IALAPAA 199 (403)
T ss_pred eeecchh
Confidence 9999986
No 93
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.49 E-value=1.2e-12 Score=115.29 Aligned_cols=237 Identities=17% Similarity=0.094 Sum_probs=125.2
Q ss_pred ccccCeEEcCCCcEEEEEEcCCC-CCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC
Q 016533 67 AVTAPRIKLRDGRHLAYKEHGVP-KDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR 145 (388)
Q Consensus 67 ~~~~~~~~~~~g~~l~y~~~g~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 145 (388)
......+...+|.+|+-+..-+. .+.+-|.||.+||.++....+. .. ..+ ...||.|+.+|.
T Consensus 55 ~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~---~~-------------~~~-a~~G~~vl~~d~ 117 (320)
T PF05448_consen 55 EVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPF---DL-------------LPW-AAAGYAVLAMDV 117 (320)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHH---HH-------------HHH-HHTT-EEEEE--
T ss_pred EEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcc---cc-------------ccc-ccCCeEEEEecC
Confidence 34455666668888887766544 3345688999999999977665 33 233 345999999999
Q ss_pred CCcCC-CCCC--------CCC---C---------hhhHHHHHHHHHHHhC----C-CCcEEEEEecccHHHHHHHHHhCC
Q 016533 146 AGYGE-SDPN--------PNR---T---------VKSDALDIEELADQLG----V-GSKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 146 ~G~G~-S~~~--------~~~---~---------~~~~~~dl~~~l~~l~----~-~~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
||+|. +... .++ . +..+..|....++.+. + ++++.+.|.|+||.+++.+|+..
T Consensus 118 rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd- 196 (320)
T PF05448_consen 118 RGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD- 196 (320)
T ss_dssp TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-
T ss_pred CCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC-
Confidence 99993 3210 011 1 2223456555555541 1 26999999999999999999986
Q ss_pred cccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHH
Q 016533 200 HRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVL 279 (388)
Q Consensus 200 ~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (388)
++|++++...|+..- - ...+..... ...+..................+.+
T Consensus 197 ~rv~~~~~~vP~l~d-------~--~~~~~~~~~---------------------~~~y~~~~~~~~~~d~~~~~~~~v~ 246 (320)
T PF05448_consen 197 PRVKAAAADVPFLCD-------F--RRALELRAD---------------------EGPYPEIRRYFRWRDPHHEREPEVF 246 (320)
T ss_dssp ST-SEEEEESESSSS-------H--HHHHHHT-----------------------STTTHHHHHHHHHHSCTHCHHHHHH
T ss_pred ccccEEEecCCCccc-------h--hhhhhcCCc---------------------cccHHHHHHHHhccCCCcccHHHHH
Confidence 579999999987430 0 000000000 0000000000000000001111111
Q ss_pred hhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCC-Cce
Q 016533 280 SKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLP-WIH 358 (388)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~ 358 (388)
..+ ..+ +...--++|+||+++-.|-.|.++|++..-..++.++ ..+
T Consensus 247 ~~L--------------~Y~-------------------D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~ 293 (320)
T PF05448_consen 247 ETL--------------SYF-------------------DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKE 293 (320)
T ss_dssp HHH--------------HTT--------------------HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEE
T ss_pred HHH--------------hhh-------------------hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCee
Confidence 110 000 1111123467779999999999999999999999996 568
Q ss_pred EEEeCCCCCCcccCCCchHHHHHHhhcC
Q 016533 359 YHELSGAGHMFPFTDGMSDTIVKAVLTG 386 (388)
Q Consensus 359 ~~~i~~~gH~~~~e~~~~~~~i~~fl~~ 386 (388)
+.+++..||....+ .-.+...+||.+
T Consensus 294 l~vyp~~~He~~~~--~~~~~~~~~l~~ 319 (320)
T PF05448_consen 294 LVVYPEYGHEYGPE--FQEDKQLNFLKE 319 (320)
T ss_dssp EEEETT--SSTTHH--HHHHHHHHHHHH
T ss_pred EEeccCcCCCchhh--HHHHHHHHHHhc
Confidence 99999999965443 115556666653
No 94
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.49 E-value=7.3e-13 Score=108.48 Aligned_cols=228 Identities=16% Similarity=0.076 Sum_probs=137.5
Q ss_pred cCeEEcCCCcEEEEEEcCCCCC-CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc
Q 016533 70 APRIKLRDGRHLAYKEHGVPKD-NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY 148 (388)
Q Consensus 70 ~~~~~~~~g~~l~y~~~g~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~ 148 (388)
+.+++..+|.+|..+..-+... ...|.||-.||++++...|. .+ -.+.. .||.|+.+|.||.
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~---~~-------------l~wa~-~Gyavf~MdvRGQ 120 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWH---DM-------------LHWAV-AGYAVFVMDVRGQ 120 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcc---cc-------------ccccc-cceeEEEEecccC
Confidence 3445566888998776655443 34689999999999998886 55 22333 3899999999999
Q ss_pred CCCCC----CC-C-----------------CChhhHHHHHHHHHHHh------CCCCcEEEEEecccHHHHHHHHHhCCc
Q 016533 149 GESDP----NP-N-----------------RTVKSDALDIEELADQL------GVGSKFYVIGYSMGGHPIWGCLKYIPH 200 (388)
Q Consensus 149 G~S~~----~~-~-----------------~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 200 (388)
|.|.. ++ + +-+.....|+..+++.+ +. +++.+.|.|.||.+++..++.. .
T Consensus 121 g~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde-~Ri~v~G~SqGGglalaaaal~-~ 198 (321)
T COG3458 121 GSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDE-ERIGVTGGSQGGGLALAAAALD-P 198 (321)
T ss_pred CCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccch-hheEEeccccCchhhhhhhhcC-h
Confidence 98732 11 1 11223344544444443 33 7999999999999999988874 5
Q ss_pred ccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHh
Q 016533 201 RLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLS 280 (388)
Q Consensus 201 ~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (388)
+|++++.+-|+..- ++..... .. ...+. ..........+.+.+.++
T Consensus 199 rik~~~~~~Pfl~d----f~r~i~~-------~~--------------------~~~yd---ei~~y~k~h~~~e~~v~~ 244 (321)
T COG3458 199 RIKAVVADYPFLSD----FPRAIEL-------AT--------------------EGPYD---EIQTYFKRHDPKEAEVFE 244 (321)
T ss_pred hhhccccccccccc----chhheee-------cc--------------------cCcHH---HHHHHHHhcCchHHHHHH
Confidence 89999999987531 0000000 00 00000 000000000000111111
Q ss_pred hcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCC-ceE
Q 016533 281 KWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPW-IHY 359 (388)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~-~~~ 359 (388)
.+. +. ++.+--.++++|+|+..|-.|+++||...-..++.++. .++
T Consensus 245 TL~------------------yf---------------D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i 291 (321)
T COG3458 245 TLS------------------YF---------------DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTI 291 (321)
T ss_pred HHh------------------hh---------------hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceE
Confidence 110 00 33333456788899999999999999999999999964 457
Q ss_pred EEeCCCCCCcccCCCchHHHHHHhhc
Q 016533 360 HELSGAGHMFPFTDGMSDTIVKAVLT 385 (388)
Q Consensus 360 ~~i~~~gH~~~~e~~~~~~~i~~fl~ 385 (388)
.+++.-+|... |....+.+..|++
T Consensus 292 ~iy~~~aHe~~--p~~~~~~~~~~l~ 315 (321)
T COG3458 292 EIYPYFAHEGG--PGFQSRQQVHFLK 315 (321)
T ss_pred EEeeccccccC--cchhHHHHHHHHH
Confidence 77776566433 4444444555554
No 95
>COG0400 Predicted esterase [General function prediction only]
Probab=99.48 E-value=7.6e-13 Score=108.07 Aligned_cols=107 Identities=26% Similarity=0.307 Sum_probs=67.1
Q ss_pred CCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc--CC----CC-CCCCCChhh
Q 016533 89 PKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY--GE----SD-PNPNRTVKS 161 (388)
Q Consensus 89 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--G~----S~-~~~~~~~~~ 161 (388)
+.++..|.||++||+|++..++. +. ...... ++.++.+.-+-- |. +. ....++.++
T Consensus 13 ~~~p~~~~iilLHG~Ggde~~~~---~~-------------~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~ed 75 (207)
T COG0400 13 PGDPAAPLLILLHGLGGDELDLV---PL-------------PELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQED 75 (207)
T ss_pred CCCCCCcEEEEEecCCCChhhhh---hh-------------hhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhh
Confidence 33345778999999998888876 44 222222 245544322100 00 00 001123333
Q ss_pred H-------HHHHHHHHHHhCC-CCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 162 D-------ALDIEELADQLGV-GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 162 ~-------~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
. ++-+.+..+..++ .++++++|+|.||.+++.+..++|+.++++|++++..
T Consensus 76 l~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 76 LDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 3 3334444444454 2699999999999999999999999999999999874
No 96
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.46 E-value=1.3e-13 Score=94.59 Aligned_cols=77 Identities=22% Similarity=0.365 Sum_probs=64.5
Q ss_pred CcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCC-
Q 016533 78 GRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPN- 156 (388)
Q Consensus 78 g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~- 156 (388)
|.+|+|+.|.+++. .+.+|+++||++..+..|. .+ +..|. +.||.|+++|+||||+|+....
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry~---~~------------a~~L~-~~G~~V~~~D~rGhG~S~g~rg~ 63 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGRYA---HL------------AEFLA-EQGYAVFAYDHRGHGRSEGKRGH 63 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHHHH---HH------------HHHHH-hCCCEEEEECCCcCCCCCCcccc
Confidence 67899999976543 6889999999999999888 77 55555 4599999999999999996554
Q ss_pred -CChhhHHHHHHHHHH
Q 016533 157 -RTVKSDALDIEELAD 171 (388)
Q Consensus 157 -~~~~~~~~dl~~~l~ 171 (388)
.+++++++|+..+++
T Consensus 64 ~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 64 IDSFDDYVDDLHQFIQ 79 (79)
T ss_pred cCCHHHHHHHHHHHhC
Confidence 389999999998874
No 97
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.45 E-value=1.2e-11 Score=104.43 Aligned_cols=122 Identities=16% Similarity=0.111 Sum_probs=86.2
Q ss_pred eEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc-CC
Q 016533 72 RIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY-GE 150 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~ 150 (388)
.+...+ ..+.-+...+....+.|.||++|++.+-..... .+ ..+++. .||.|+++|+-+. |.
T Consensus 6 ~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~---~~------------a~rlA~-~Gy~v~~Pdl~~~~~~ 68 (236)
T COG0412 6 TIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIR---DV------------ARRLAK-AGYVVLAPDLYGRQGD 68 (236)
T ss_pred EeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchHHH---HH------------HHHHHh-CCcEEEechhhccCCC
Confidence 455545 556655554433333489999999998888776 66 455555 4999999999873 33
Q ss_pred CCCCC-------C-----CChhhHHHHHHHHHHHhC-----CCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 151 SDPNP-------N-----RTVKSDALDIEELADQLG-----VGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 151 S~~~~-------~-----~~~~~~~~dl~~~l~~l~-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
+.... . .+..+...|+.+.++.|. ..++|.++|+||||.+++.++...| .+++.+..-+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~ 145 (236)
T COG0412 69 PTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGG 145 (236)
T ss_pred CCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCC
Confidence 32111 0 123567778888888772 1268999999999999999999977 78888877764
No 98
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.44 E-value=3.6e-13 Score=114.60 Aligned_cols=103 Identities=25% Similarity=0.384 Sum_probs=64.7
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC----CcCCCCCCCCCChhhHHHHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA----GYGESDPNPNRTVKSDALDIEE 168 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~dl~~ 168 (388)
.+..||||.|++.+-.... .+ +. +...+...||.|+-+-++ |+|.+ +++..++||.+
T Consensus 32 ~~~~llfIGGLtDGl~tvp---Y~----~~------La~aL~~~~wsl~q~~LsSSy~G~G~~------SL~~D~~eI~~ 92 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVP---YL----PD------LAEALEETGWSLFQVQLSSSYSGWGTS------SLDRDVEEIAQ 92 (303)
T ss_dssp SSSEEEEE--TT--TT-ST---CH----HH------HHHHHT-TT-EEEEE--GGGBTTS-S--------HHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCc---hH----HH------HHHHhccCCeEEEEEEecCccCCcCcc------hhhhHHHHHHH
Confidence 4678999999998776544 22 00 234445558999988775 44433 88889999998
Q ss_pred HHHHhC-------CCCcEEEEEecccHHHHHHHHHhCC-----cccceeEeecccccc
Q 016533 169 LADQLG-------VGSKFYVIGYSMGGHPIWGCLKYIP-----HRLAGAGLLAPVVNY 214 (388)
Q Consensus 169 ~l~~l~-------~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lil~~~~~~~ 214 (388)
+++++. -.++|+|+|||-|+.-+++|+.... ..|+++||-+|+.+.
T Consensus 93 ~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 93 LVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp HHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred HHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 888761 1269999999999999999998753 579999999998764
No 99
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.44 E-value=1.7e-12 Score=110.65 Aligned_cols=100 Identities=14% Similarity=0.184 Sum_probs=80.4
Q ss_pred ceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhC
Q 016533 95 YKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLG 174 (388)
Q Consensus 95 ~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~ 174 (388)
++|+++|+.+++...|. .+ ...+..+ .+.|+.++.+|.+ .+.+...++++++++..+.|....
T Consensus 1 ~~lf~~p~~gG~~~~y~---~l------------a~~l~~~-~~~v~~i~~~~~~-~~~~~~~si~~la~~y~~~I~~~~ 63 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYR---PL------------ARALPDD-VIGVYGIEYPGRG-DDEPPPDSIEELASRYAEAIRARQ 63 (229)
T ss_dssp -EEEEESSTTCSGGGGH---HH------------HHHHTTT-EEEEEEECSTTSC-TTSHEESSHHHHHHHHHHHHHHHT
T ss_pred CeEEEEcCCccCHHHHH---HH------------HHhCCCC-eEEEEEEecCCCC-CCCCCCCCHHHHHHHHHHHhhhhC
Confidence 37999999999999998 77 4444443 4899999999998 333344699999999888888877
Q ss_pred CCCcEEEEEecccHHHHHHHHHhC---CcccceeEeeccc
Q 016533 175 VGSKFYVIGYSMGGHPIWGCLKYI---PHRLAGAGLLAPV 211 (388)
Q Consensus 175 ~~~~~~lvGhS~Gg~ia~~~a~~~---p~~v~~lil~~~~ 211 (388)
.+.++.|+|||+||.+|+++|.+- ...+..++++++.
T Consensus 64 ~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 64 PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 635999999999999999999763 4568999999965
No 100
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.44 E-value=9e-12 Score=107.47 Aligned_cols=105 Identities=21% Similarity=0.219 Sum_probs=88.9
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHH--hCeEEEEeCCCCcCCCCCC-------CCCChhhHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIED--LGVYIVSYDRAGYGESDPN-------PNRTVKSDAL 164 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~ 164 (388)
+..+|+++|++|-...|. .+ +..+.+. ..|.|++..+.||-.++.. ..++++++++
T Consensus 2 ~~li~~IPGNPGlv~fY~---~F------------l~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~ 66 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYE---EF------------LSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIE 66 (266)
T ss_pred cEEEEEECCCCChHHHHH---HH------------HHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHH
Confidence 568999999999999998 77 6777665 2699999999999877654 3479999999
Q ss_pred HHHHHHHHhC-----CCCcEEEEEecccHHHHHHHHHhCC---cccceeEeeccccc
Q 016533 165 DIEELADQLG-----VGSKFYVIGYSMGGHPIWGCLKYIP---HRLAGAGLLAPVVN 213 (388)
Q Consensus 165 dl~~~l~~l~-----~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lil~~~~~~ 213 (388)
...++++.+- .+.+++|+|||.|++++++++.+.+ .+|.+++++-|+..
T Consensus 67 hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 67 HKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred HHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 8888887652 3478999999999999999999999 78999999999865
No 101
>PRK10115 protease 2; Provisional
Probab=99.43 E-value=1.3e-11 Score=120.36 Aligned_cols=133 Identities=17% Similarity=0.139 Sum_probs=93.7
Q ss_pred CccccCeEEcCCCcEEEEE-EcCCC--CCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEE
Q 016533 66 PAVTAPRIKLRDGRHLAYK-EHGVP--KDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVS 142 (388)
Q Consensus 66 ~~~~~~~~~~~~g~~l~y~-~~g~~--~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~ 142 (388)
...+...++..||.+|.+. .+.+. .+.+.|.||++||..+......+. .. ...++. +||.|+.
T Consensus 414 ~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~-~~------------~~~l~~-rG~~v~~ 479 (686)
T PRK10115 414 YRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFS-FS------------RLSLLD-RGFVYAI 479 (686)
T ss_pred cEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCcc-HH------------HHHHHH-CCcEEEE
Confidence 3455666778899999873 33222 123469999999988766543210 22 344554 5999999
Q ss_pred eCCCCcCCCCC---------CCCCChhhHHHHHHHHHHHh--CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 143 YDRAGYGESDP---------NPNRTVKSDALDIEELADQL--GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 143 ~D~~G~G~S~~---------~~~~~~~~~~~dl~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
++.||-|.=.. ....+++|+++.++.+++.= .. +++.+.|.|.||.++..++.++|++++++|...|+
T Consensus 480 ~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~-~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 480 VHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSP-SLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred EEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCh-HHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 99998654321 11235666666666665541 23 79999999999999999999999999999999998
Q ss_pred cc
Q 016533 212 VN 213 (388)
Q Consensus 212 ~~ 213 (388)
.+
T Consensus 559 ~D 560 (686)
T PRK10115 559 VD 560 (686)
T ss_pred hh
Confidence 65
No 102
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.40 E-value=3.3e-12 Score=109.05 Aligned_cols=120 Identities=18% Similarity=0.257 Sum_probs=98.9
Q ss_pred CCcEEEEEEcCCCCCCC---CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHH--------hCeEEEEeCC
Q 016533 77 DGRHLAYKEHGVPKDNA---KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIED--------LGVYIVSYDR 145 (388)
Q Consensus 77 ~g~~l~y~~~g~~~~~~---~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~g~~vi~~D~ 145 (388)
.|.+||+.+..+++.+. -.+||++|||+|+...|. .+ ++-|.+. .-|.||++.+
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFy---kf------------IPlLT~p~~hg~~~d~~FEVI~PSl 196 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFY---KF------------IPLLTDPKRHGNESDYAFEVIAPSL 196 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHH---hh------------hhhhcCccccCCccceeEEEeccCC
Confidence 69999998887764322 348999999999999888 76 4444432 1389999999
Q ss_pred CCcCCCCCCC--CCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 146 AGYGESDPNP--NRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 146 ~G~G~S~~~~--~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
||+|.|+.+. +.+..+.+.-+..++=.+|. .++.+-|-.||+.|+..+|..||++|.|+-+-.+..
T Consensus 197 PGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~-nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 197 PGYGWSDAPSKTGFNAAATARVMRKLMLRLGY-NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred CCcccCcCCccCCccHHHHHHHHHHHHHHhCc-ceeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 9999999654 56778888899999999999 799999999999999999999999999987755543
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.39 E-value=4.7e-11 Score=96.41 Aligned_cols=89 Identities=21% Similarity=0.309 Sum_probs=66.6
Q ss_pred EEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhC--eEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhC
Q 016533 97 IFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLG--VYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLG 174 (388)
Q Consensus 97 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~ 174 (388)
|+++||+.++..... .. .....+++.+ ..++++|++ ...++..+.+.++++...
T Consensus 2 ilYlHGF~Ssp~S~K---a~-----------~l~~~~~~~~~~~~~~~p~l~----------~~p~~a~~~l~~~i~~~~ 57 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFK---AQ-----------ALKQYFAEHGPDIQYPCPDLP----------PFPEEAIAQLEQLIEELK 57 (187)
T ss_pred eEEecCCCCCCCCHH---HH-----------HHHHHHHHhCCCceEECCCCC----------cCHHHHHHHHHHHHHhCC
Confidence 799999999998876 21 0244444433 455666653 466777888999999887
Q ss_pred CCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 175 VGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 175 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
. +.+.|+|.||||..|..+|.+++ +.+ |+++|.+.
T Consensus 58 ~-~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 58 P-ENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred C-CCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 6 56999999999999999999986 334 99999853
No 104
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.36 E-value=1e-11 Score=100.32 Aligned_cols=124 Identities=22% Similarity=0.235 Sum_probs=78.0
Q ss_pred CeEEcCCCcEEEEEEcCCCCCCC--CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc
Q 016533 71 PRIKLRDGRHLAYKEHGVPKDNA--KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY 148 (388)
Q Consensus 71 ~~~~~~~g~~l~y~~~g~~~~~~--~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~ 148 (388)
+.+...+|.+|+.++..|..+.+ .++||+..|++.....|. .+ ++.+...||+|+-+|.-.|
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~a---gL-------------A~YL~~NGFhViRyDsl~H 68 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFA---GL-------------AEYLSANGFHVIRYDSLNH 68 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGH---HH-------------HHHHHTTT--EEEE---B-
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHH---HH-------------HHHHhhCCeEEEecccccc
Confidence 46778899999999886654332 589999999999999998 77 5555556999999999988
Q ss_pred -CCCCCCC-CCChhhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 149 -GESDPNP-NRTVKSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 149 -G~S~~~~-~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
|.|++.. .+++..-.+++..+++++ |. .++.|+.-|+.|.+|+..|.+ . .+.-+|...++.+
T Consensus 69 vGlSsG~I~eftms~g~~sL~~V~dwl~~~g~-~~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVGVVn 135 (294)
T PF02273_consen 69 VGLSSGDINEFTMSIGKASLLTVIDWLATRGI-RRIGLIAASLSARIAYEVAAD-I-NLSFLITAVGVVN 135 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-
T ss_pred ccCCCCChhhcchHHhHHHHHHHHHHHHhcCC-CcchhhhhhhhHHHHHHHhhc-c-CcceEEEEeeeee
Confidence 8888654 578888888888888776 66 689999999999999999996 3 4777888777654
No 105
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.36 E-value=2.4e-11 Score=106.46 Aligned_cols=253 Identities=14% Similarity=0.100 Sum_probs=137.4
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHH-----HHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDA-----LDIE 167 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~-----~dl~ 167 (388)
-+.++|++|-+-.....+++ . |-- ++-..+.+.|+.|+.+|+++=..+.. ..++++++ +.+.
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl---~-~~~-------s~V~~l~~~g~~vfvIsw~nPd~~~~--~~~~edYi~e~l~~aid 172 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDL---S-PEK-------SLVRWLLEQGLDVFVISWRNPDASLA--AKNLEDYILEGLSEAID 172 (445)
T ss_pred CCCceEeeccccCceeEEeC---C-CCc-------cHHHHHHHcCCceEEEeccCchHhhh--hccHHHHHHHHHHHHHH
Confidence 47899999999988888872 1 111 12344445599999999987666654 33555555 4455
Q ss_pred HHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcc-cceeEeeccccccCCCCCCchhh----HHHHhhcCCchhHHHHHH
Q 016533 168 ELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHR-LAGAGLLAPVVNYWWPGFPANLS----KEAYYQQLPQDQWAVRVA 242 (388)
Q Consensus 168 ~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 242 (388)
.+.+..+. +++.++|||.||.++..+++.++.+ |++++++.+..++..++.-.... .+.+...... .
T Consensus 173 ~v~~itg~-~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~-------~ 244 (445)
T COG3243 173 TVKDITGQ-KDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQ-------K 244 (445)
T ss_pred HHHHHhCc-cccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhh-------c
Confidence 55556677 7999999999999999999998888 99999999888764433221111 1111110000 0
Q ss_pred hhcchh-----hhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCC
Q 016533 243 HYIPWL-----TYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDP 317 (388)
Q Consensus 243 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (388)
..++.. +.......+.- ..+.......-.+...+.+........ ..........+.+..+.......+...
T Consensus 245 g~lpg~~ma~~F~mLrpndliw-~~fV~nyl~ge~pl~fdllyWn~dst~--~~~~~~~~~Lrn~y~~N~l~~g~~~v~- 320 (445)
T COG3243 245 GILPGWYMAIVFFLLRPNDLIW-NYFVNNYLDGEQPLPFDLLYWNADSTR--LPGAAHSEYLRNFYLENRLIRGGLEVS- 320 (445)
T ss_pred cCCChHHHHHHHHhcCccccch-HHHHHHhcCCCCCCchhHHHhhCCCcc--CchHHHHHHHHHHHHhChhhccceEEC-
Confidence 011100 00000000000 001111111011111111111111100 111111222222222222222322222
Q ss_pred CCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCccc
Q 016533 318 LDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPF 371 (388)
Q Consensus 318 ~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 371 (388)
.....+.+|+||++.+.|++|.++|.+......+.+++-...++-++||....
T Consensus 321 -G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~v 373 (445)
T COG3243 321 -GTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGV 373 (445)
T ss_pred -CEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEE
Confidence 33346678889999999999999999999999999988333344468997654
No 106
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.34 E-value=4.2e-12 Score=122.21 Aligned_cols=111 Identities=19% Similarity=0.278 Sum_probs=85.6
Q ss_pred eEEcCCCcEEEEEEcCCCC------CCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC
Q 016533 72 RIKLRDGRHLAYKEHGVPK------DNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR 145 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~------~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 145 (388)
.+...++.++.|...|... ....|+||++||++++...|. .+ ...+.+ .||+|+++|+
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~---~l------------A~~La~-~Gy~VIaiDl 484 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENAL---AF------------AGTLAA-AGVATIAIDH 484 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHH---HH------------HHHHHh-CCcEEEEeCC
Confidence 5556688888888765431 122468999999999999998 77 555554 4899999999
Q ss_pred CCcCCCCCC----------C---C-----------CChhhHHHHHHHHHHHhC--------------C-CCcEEEEEecc
Q 016533 146 AGYGESDPN----------P---N-----------RTVKSDALDIEELADQLG--------------V-GSKFYVIGYSM 186 (388)
Q Consensus 146 ~G~G~S~~~----------~---~-----------~~~~~~~~dl~~~l~~l~--------------~-~~~~~lvGhS~ 186 (388)
||||.|... . . .++++.+.|+..++..++ . ..+++++||||
T Consensus 485 pGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSL 564 (792)
T TIGR03502 485 PLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSL 564 (792)
T ss_pred CCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCH
Confidence 999999432 1 1 267888999998888776 1 25899999999
Q ss_pred cHHHHHHHHHhC
Q 016533 187 GGHPIWGCLKYI 198 (388)
Q Consensus 187 Gg~ia~~~a~~~ 198 (388)
||.++..++...
T Consensus 565 Ggiig~~~~~~a 576 (792)
T TIGR03502 565 GGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHhc
Confidence 999999999863
No 107
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.31 E-value=3.6e-11 Score=96.32 Aligned_cols=121 Identities=17% Similarity=0.221 Sum_probs=79.8
Q ss_pred CeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCC
Q 016533 71 PRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGE 150 (388)
Q Consensus 71 ~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~ 150 (388)
..+...||..+....+.... +....|++-.+.+.....|. .+ ..++.+.||.|+++|+||.|.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-~~~g~~~va~a~Gv~~~fYR---rf-------------A~~a~~~Gf~Vlt~dyRG~g~ 70 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-KASGRLVVAGATGVGQYFYR---RF-------------AAAAAKAGFEVLTFDYRGIGQ 70 (281)
T ss_pred cccccCCCccCccccccCCC-CCCCcEEecccCCcchhHhH---HH-------------HHHhhccCceEEEEecccccC
Confidence 35667799998888775432 22234555555555555555 45 677777799999999999999
Q ss_pred CCCCC----CCChhhHHH-HHHHHHHHhC---CCCcEEEEEecccHHHHHHHHHhCCcccceeEeecc
Q 016533 151 SDPNP----NRTVKSDAL-DIEELADQLG---VGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAP 210 (388)
Q Consensus 151 S~~~~----~~~~~~~~~-dl~~~l~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 210 (388)
|++.. .+.+.|++. |+...++.++ .+.+...||||+||.+.-.+.. ++ +..+....+.
T Consensus 71 S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~ 136 (281)
T COG4757 71 SRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGS 136 (281)
T ss_pred CCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEecc
Confidence 98543 246666654 5666555542 2379999999999997654444 45 4555544443
No 108
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.30 E-value=1e-11 Score=108.37 Aligned_cols=131 Identities=19% Similarity=0.159 Sum_probs=86.9
Q ss_pred CCcEEEEEEcCC--CCCCCCceEEEEccCCCCCcc-ccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCC
Q 016533 77 DGRHLAYKEHGV--PKDNAKYKIFFVHGFDSCRHD-SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDP 153 (388)
Q Consensus 77 ~g~~l~y~~~g~--~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~ 153 (388)
||++|+...+-+ ....+-|+||..|+++.+... .... ...+.... ....+.++||.|+..|.||.|.|+.
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~-~~~~~~~~------~~~~~~~~GY~vV~~D~RG~g~S~G 73 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLA-GANPGPPS------ARRPFAERGYAVVVQDVRGTGGSEG 73 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHH-TTCHHSHG------GGHHHHHTT-EEEEEE-TTSTTS-S
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchh-hhhcccch------hHHHHHhCCCEEEEECCcccccCCC
Confidence 688998888866 444557899999999965411 1100 11000000 0112445599999999999999997
Q ss_pred CCCCChhhHHHHHHHHHHHhC---C-CCcEEEEEecccHHHHHHHHHhCCcccceeEeecccccc
Q 016533 154 NPNRTVKSDALDIEELADQLG---V-GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNY 214 (388)
Q Consensus 154 ~~~~~~~~~~~dl~~~l~~l~---~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~ 214 (388)
.........++|..++|+.+. . +.+|.++|.|++|...+.+|...|..+++++...+..+.
T Consensus 74 ~~~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 74 EFDPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp -B-TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred ccccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 665446667778777777762 2 259999999999999999999889999999999887664
No 109
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.30 E-value=3.2e-10 Score=85.48 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=73.2
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCC-----CCCC--CCChhhHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGES-----DPNP--NRTVKSDALD 165 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S-----~~~~--~~~~~~~~~d 165 (388)
...+||+.||.+.+.+.-.+ +. +...+...|+.|.-|+++-.-.- .+++ ..-..++...
T Consensus 13 ~~~tilLaHGAGasmdSt~m-~~-------------~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~ 78 (213)
T COG3571 13 APVTILLAHGAGASMDSTSM-TA-------------VAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVA 78 (213)
T ss_pred CCEEEEEecCCCCCCCCHHH-HH-------------HHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHH
Confidence 35689999999987765431 02 24444556999999999754321 1222 1234566777
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeecc
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAP 210 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 210 (388)
+.++...+.- .+.++-|+||||.++.+++..-.-.|+++++++=
T Consensus 79 ~aql~~~l~~-gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgY 122 (213)
T COG3571 79 IAQLRAGLAE-GPLIIGGKSMGGRVASMVADELQAPIDGLVCLGY 122 (213)
T ss_pred HHHHHhcccC-CceeeccccccchHHHHHHHhhcCCcceEEEecC
Confidence 7778777765 5999999999999999998775556999999983
No 110
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.28 E-value=3.3e-11 Score=101.23 Aligned_cols=98 Identities=18% Similarity=0.213 Sum_probs=65.9
Q ss_pred EEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh---
Q 016533 97 IFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL--- 173 (388)
Q Consensus 97 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l--- 173 (388)
||++||.+-....-.....+ ...++.+.|+.|+.+|+|=. +...+.+..+|+.+.++.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~------------~~~la~~~g~~v~~~~Yrl~------p~~~~p~~~~D~~~a~~~l~~~ 62 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPF------------AARLAAERGFVVVSIDYRLA------PEAPFPAALEDVKAAYRWLLKN 62 (211)
T ss_dssp EEEE--STTTSCGTTTHHHH------------HHHHHHHHTSEEEEEE---T------TTSSTTHHHHHHHHHHHHHHHT
T ss_pred CEEECCcccccCChHHHHHH------------HHHHHhhccEEEEEeecccc------ccccccccccccccceeeeccc
Confidence 79999988443332200033 56777767999999999832 3345666777766655543
Q ss_pred ------CCCCcEEEEEecccHHHHHHHHHhCCc----ccceeEeeccccc
Q 016533 174 ------GVGSKFYVIGYSMGGHPIWGCLKYIPH----RLAGAGLLAPVVN 213 (388)
Q Consensus 174 ------~~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lil~~~~~~ 213 (388)
+. ++++|+|+|.||.+++.++....+ .++++++++|..+
T Consensus 63 ~~~~~~d~-~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 63 ADKLGIDP-ERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp HHHHTEEE-EEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred cccccccc-cceEEeecccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 23 699999999999999999976443 4899999999754
No 111
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.24 E-value=6.1e-10 Score=85.95 Aligned_cols=170 Identities=14% Similarity=0.105 Sum_probs=111.4
Q ss_pred ceEEEEccCCCCCc-cccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh
Q 016533 95 YKIFFVHGFDSCRH-DSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL 173 (388)
Q Consensus 95 ~~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 173 (388)
+.+|++||+.++.. .|. .....+. -.+-.+++. .+.....+++++.+.+.+...
T Consensus 3 ~~~lIVpG~~~Sg~~HWq------------------~~we~~l-~~a~rveq~------~w~~P~~~dWi~~l~~~v~a~ 57 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQ------------------SRWESAL-PNARRVEQD------DWEAPVLDDWIARLEKEVNAA 57 (181)
T ss_pred ceEEEecCCCCCChhHHH------------------HHHHhhC-ccchhcccC------CCCCCCHHHHHHHHHHHHhcc
Confidence 57899999987764 444 3333332 112222221 112347888888888888877
Q ss_pred CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhc
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWN 253 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (388)
. ++++||+||+|+.+++.++......|.|+++++|+--- .+
T Consensus 58 ~--~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~----~~--------------------------------- 98 (181)
T COG3545 58 E--GPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVS----RP--------------------------------- 98 (181)
T ss_pred C--CCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcc----cc---------------------------------
Confidence 3 57999999999999999999887799999999986210 00
Q ss_pred ccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccEEE
Q 016533 254 TQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSVHL 333 (388)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pvli 333 (388)
......... ++. .|..+..-|.++
T Consensus 99 -------------------~~~~~~~~t---------------------------------f~~----~p~~~lpfps~v 122 (181)
T COG3545 99 -------------------EIRPKHLMT---------------------------------FDP----IPREPLPFPSVV 122 (181)
T ss_pred -------------------ccchhhccc---------------------------------cCC----CccccCCCceeE
Confidence 000000000 000 011222334999
Q ss_pred EecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC----CCchHHHHHHhhc
Q 016533 334 WHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT----DGMSDTIVKAVLT 385 (388)
Q Consensus 334 i~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e----~~~~~~~i~~fl~ 385 (388)
+.+++|++++++.++.+++... +.++.+.++||+.-.+ -.+....+.+|+.
T Consensus 123 vaSrnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 123 VASRNDPYVSYEHAEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred EEecCCCCCCHHHHHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhh
Confidence 9999999999999999999884 7788888899976654 2334555666654
No 112
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.24 E-value=7.5e-10 Score=102.95 Aligned_cols=144 Identities=17% Similarity=0.212 Sum_probs=92.9
Q ss_pred cccCeEEcCC---CcEEEEEEcCCCCC-CCCceEEEEccCCCCCccccccccCCCCCccccccCc--hHHHHHHhCeEEE
Q 016533 68 VTAPRIKLRD---GRHLAYKEHGVPKD-NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGI--YQEVIEDLGVYIV 141 (388)
Q Consensus 68 ~~~~~~~~~~---g~~l~y~~~g~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~g~~vi 141 (388)
....++.+.+ +..++|+.+....+ ...|.||+++|.+|.+..+.+.....|+.-.-=.... -+.-..+ -..++
T Consensus 47 ~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l 125 (462)
T PTZ00472 47 QWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVI 125 (462)
T ss_pred ceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeE
Confidence 3456777743 67898888764322 3479999999999988766422233332100000000 0000111 25899
Q ss_pred EeCCC-CcCCCCCCC---CCChhhHHHHHHHHHHHh-------CCCCcEEEEEecccHHHHHHHHHhC----------Cc
Q 016533 142 SYDRA-GYGESDPNP---NRTVKSDALDIEELADQL-------GVGSKFYVIGYSMGGHPIWGCLKYI----------PH 200 (388)
Q Consensus 142 ~~D~~-G~G~S~~~~---~~~~~~~~~dl~~~l~~l-------~~~~~~~lvGhS~Gg~ia~~~a~~~----------p~ 200 (388)
.+|.| |+|.|.... ..+.++.++|+.++++.. +. .+++|+|||+||.++..+|..- .-
T Consensus 126 ~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~-~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 126 YVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRA-NDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccC-CCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 99975 888886432 235678899999888754 33 6999999999999998877652 12
Q ss_pred ccceeEeeccccc
Q 016533 201 RLAGAGLLAPVVN 213 (388)
Q Consensus 201 ~v~~lil~~~~~~ 213 (388)
.++|+++-++..+
T Consensus 205 nLkGi~IGNg~~d 217 (462)
T PTZ00472 205 NLAGLAVGNGLTD 217 (462)
T ss_pred eeEEEEEeccccC
Confidence 4789999998765
No 113
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.23 E-value=2.4e-10 Score=112.28 Aligned_cols=84 Identities=17% Similarity=0.049 Sum_probs=68.0
Q ss_pred HHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCC-------------------CCcEEEEEecccHHH
Q 016533 130 QEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGV-------------------GSKFYVIGYSMGGHP 190 (388)
Q Consensus 130 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~-------------------~~~~~lvGhS~Gg~i 190 (388)
...+..+||.|+..|.||+|.|++.......+..+|..++|+.+.- +.+|.++|.|+||.+
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 4555556999999999999999875433335667777777777741 369999999999999
Q ss_pred HHHHHHhCCcccceeEeeccccc
Q 016533 191 IWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 191 a~~~a~~~p~~v~~lil~~~~~~ 213 (388)
++.+|...|+.++++|..++..+
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCCc
Confidence 99999998999999999887653
No 114
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.22 E-value=1.5e-09 Score=96.82 Aligned_cols=116 Identities=19% Similarity=0.197 Sum_probs=76.7
Q ss_pred CCcEEEEEEcCC--CCCCCCceEEEEccCC---CCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCC
Q 016533 77 DGRHLAYKEHGV--PKDNAKYKIFFVHGFD---SCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGES 151 (388)
Q Consensus 77 ~g~~l~y~~~g~--~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 151 (388)
++..+.++.+.+ ......|+||++||.+ ++..... .+ +..++...|+.|+++|+|-..+
T Consensus 60 ~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~---~~------------~~~~~~~~g~~vv~vdYrlaPe- 123 (312)
T COG0657 60 SGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHD---AL------------VARLAAAAGAVVVSVDYRLAPE- 123 (312)
T ss_pred CCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhH---HH------------HHHHHHHcCCEEEecCCCCCCC-
Confidence 333344555554 3223479999999988 3444443 33 5777788899999999984332
Q ss_pred CCCCCCChhhHHHHHHHHHH----H---hCC-CCcEEEEEecccHHHHHHHHHhCCc----ccceeEeeccccc
Q 016533 152 DPNPNRTVKSDALDIEELAD----Q---LGV-GSKFYVIGYSMGGHPIWGCLKYIPH----RLAGAGLLAPVVN 213 (388)
Q Consensus 152 ~~~~~~~~~~~~~dl~~~l~----~---l~~-~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lil~~~~~~ 213 (388)
+.+....+|+.+.++ + ++. .+++.++|+|.||.+++.++..-.+ ...+.+++.|..+
T Consensus 124 -----~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 124 -----HPFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred -----CCCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 233334444333332 2 222 2789999999999999999876443 5788999998865
No 115
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.19 E-value=7.3e-10 Score=91.70 Aligned_cols=117 Identities=19% Similarity=0.217 Sum_probs=77.4
Q ss_pred EEEEcCCCCC--CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCC------C
Q 016533 82 AYKEHGVPKD--NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESD------P 153 (388)
Q Consensus 82 ~y~~~g~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~------~ 153 (388)
.|+.+-++.. .+.|.||++||.+.+...+. ...- +..+.++.||-|+.++........ .
T Consensus 2 ~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~---~~s~----------~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~ 68 (220)
T PF10503_consen 2 SYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFA---AGSG----------WNALADREGFIVVYPEQSRRANPQGCWNWFS 68 (220)
T ss_pred cEEEecCCCCCCCCCCEEEEeCCCCCCHHHHH---hhcC----------HHHHhhcCCeEEEcccccccCCCCCcccccc
Confidence 4555544321 23589999999999988776 3210 478888889999999864221110 0
Q ss_pred CCC----CChhhHHHHHHHHHHHhCCC-CcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 154 NPN----RTVKSDALDIEELADQLGVG-SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 154 ~~~----~~~~~~~~dl~~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
... .+...+.+.+..++++.+++ .+|++.|+|.||+++..++..|||.+.++...++.
T Consensus 69 ~~~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 69 DDQQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred cccccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 000 11222223333344444432 69999999999999999999999999999988875
No 116
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.16 E-value=3.6e-10 Score=88.90 Aligned_cols=205 Identities=13% Similarity=0.048 Sum_probs=122.9
Q ss_pred CCCcEEEEEEcCCCCCCCCceEEEEccCCC---CCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCC
Q 016533 76 RDGRHLAYKEHGVPKDNAKYKIFFVHGFDS---CRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESD 152 (388)
Q Consensus 76 ~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~ 152 (388)
..|.+-....||+. ...+..||+||.-- +..... .+ ...+.++||+|.++++ +.+.
T Consensus 51 g~~g~q~VDIwg~~--~~~klfIfIHGGYW~~g~rk~cl---si-------------v~~a~~~gY~vasvgY---~l~~ 109 (270)
T KOG4627|consen 51 GEGGRQLVDIWGST--NQAKLFIFIHGGYWQEGDRKMCL---SI-------------VGPAVRRGYRVASVGY---NLCP 109 (270)
T ss_pred CCCCceEEEEecCC--CCccEEEEEecchhhcCchhccc---ch-------------hhhhhhcCeEEEEecc---CcCc
Confidence 33445567788863 45789999999753 332222 22 3444556999998865 4443
Q ss_pred CCCCCChh----hHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-CCcccceeEeeccccccCCCCCCchhhHHH
Q 016533 153 PNPNRTVK----SDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKY-IPHRLAGAGLLAPVVNYWWPGFPANLSKEA 227 (388)
Q Consensus 153 ~~~~~~~~----~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 227 (388)
...+++ +...-+.-+++.....+++.+-|||.|++++++...+ +..+|.++++.++..+..
T Consensus 110 --q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~------------ 175 (270)
T KOG4627|consen 110 --QVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLR------------ 175 (270)
T ss_pred --ccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHH------------
Confidence 233444 4444455555655443678888999999999987765 567899999999874310
Q ss_pred HhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHH
Q 016533 228 YYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMM 307 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (388)
.+.. ......-.++.+..+... .
T Consensus 176 ----------------------------EL~~---te~g~dlgLt~~~ae~~S-----------------------c--- 198 (270)
T KOG4627|consen 176 ----------------------------ELSN---TESGNDLGLTERNAESVS-----------------------C--- 198 (270)
T ss_pred ----------------------------HHhC---CccccccCcccchhhhcC-----------------------c---
Confidence 0000 000000001111111000 0
Q ss_pred hhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-----CCchHHHHHH
Q 016533 308 VGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-----DGMSDTIVKA 382 (388)
Q Consensus 308 ~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-----~~~~~~~i~~ 382 (388)
++ ..+..+++|+|++.+++|.-.-.+..+.+.+....+++..+++.+|+-..+ .......++.
T Consensus 199 -----------dl-~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~ 266 (270)
T KOG4627|consen 199 -----------DL-WEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEETAIDDSDVSRFLRN 266 (270)
T ss_pred -----------cH-HHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHHhccccchHHHHHHH
Confidence 00 012345566999999999766667788888888889999999999987765 2234445555
Q ss_pred hh
Q 016533 383 VL 384 (388)
Q Consensus 383 fl 384 (388)
|+
T Consensus 267 ~~ 268 (270)
T KOG4627|consen 267 IE 268 (270)
T ss_pred Hh
Confidence 54
No 117
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.16 E-value=1.9e-09 Score=90.36 Aligned_cols=101 Identities=23% Similarity=0.212 Sum_probs=68.3
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCC-CCChhhHHHHHHHHHH-
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNP-NRTVKSDALDIEELAD- 171 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~dl~~~l~- 171 (388)
=|+|||+||+......|. .+ +.+++. +||-|+.+|+...+...... .....+.++.+.+=++
T Consensus 17 yPVv~f~~G~~~~~s~Ys---~l------------l~hvAS-hGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~ 80 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYS---QL------------LEHVAS-HGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLES 80 (259)
T ss_pred cCEEEEeCCcCCCHHHHH---HH------------HHHHHh-CceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchh
Confidence 579999999996666666 66 566655 49999999976543311110 1122222222222111
Q ss_pred Hh------CCCCcEEEEEecccHHHHHHHHHhC-----CcccceeEeeccc
Q 016533 172 QL------GVGSKFYVIGYSMGGHPIWGCLKYI-----PHRLAGAGLLAPV 211 (388)
Q Consensus 172 ~l------~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~~~ 211 (388)
.+ +. .++.|.|||-||-++..++..+ +.+++++++++|+
T Consensus 81 ~l~~~v~~D~-s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 81 KLPLGVKPDF-SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred hccccccccc-cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 11 34 6899999999999999999887 5689999999997
No 118
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=3.1e-09 Score=104.28 Aligned_cols=223 Identities=16% Similarity=0.148 Sum_probs=137.5
Q ss_pred CeEEcCCCcEEEEEEcCCCCC---CCCceEEEEccCCCCCcccc-ccccCCCCCccccccCchHHHHHHhCeEEEEeCCC
Q 016533 71 PRIKLRDGRHLAYKEHGVPKD---NAKYKIFFVHGFDSCRHDSA-VANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA 146 (388)
Q Consensus 71 ~~~~~~~g~~l~y~~~g~~~~---~~~~~vv~~HG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 146 (388)
..+.. +|...++...-|+.- +.=|.||.+||.+++..... +...+ ...+....|+.|+.+|.|
T Consensus 501 ~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~------------~~~~~s~~g~~v~~vd~R 567 (755)
T KOG2100|consen 501 GKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDW------------NEVVVSSRGFAVLQVDGR 567 (755)
T ss_pred EEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecH------------HHHhhccCCeEEEEEcCC
Confidence 34555 888888887765421 22367788889887443322 00011 345566679999999999
Q ss_pred CcCCCCCCC---------CCChhhHHHHHHHHHHHhCCC-CcEEEEEecccHHHHHHHHHhCCcc-cceeEeeccccccC
Q 016533 147 GYGESDPNP---------NRTVKSDALDIEELADQLGVG-SKFYVIGYSMGGHPIWGCLKYIPHR-LAGAGLLAPVVNYW 215 (388)
Q Consensus 147 G~G~S~~~~---------~~~~~~~~~dl~~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~ 215 (388)
|-|.....- ....+|+...+..+++..-++ +++.++|+|+||.+++.++...|+. ++..+.++|+.++.
T Consensus 568 Gs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 568 GSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL 647 (755)
T ss_pred CcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee
Confidence 987654221 235666666666666654332 7999999999999999999998855 55559999987631
Q ss_pred CCCCCchhhHHHHhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHh
Q 016533 216 WPGFPANLSKEAYYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQ 295 (388)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (388)
. ......+.+. .........+.+.
T Consensus 648 ~---yds~~terym----------------------------------------g~p~~~~~~y~e~------------- 671 (755)
T KOG2100|consen 648 Y---YDSTYTERYM----------------------------------------GLPSENDKGYEES------------- 671 (755)
T ss_pred e---ecccccHhhc----------------------------------------CCCccccchhhhc-------------
Confidence 0 0000000000 0000000000000
Q ss_pred hchhhHHHHHHHhhccCcCCCCCCCCCCCCCCCccE-EEEecCCCCCCcHHHHHHHHHhCC----CceEEEeCCCCCCcc
Q 016533 296 QGEYESLHRDMMVGFGTWEFDPLDLKNPFPNNEGSV-HLWHGDEDRLVPVILQRYIVQRLP----WIHYHELSGAGHMFP 370 (388)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~Pv-lii~G~~D~~~p~~~~~~~~~~~~----~~~~~~i~~~gH~~~ 370 (388)
....++..++.|. |++||+.|..++.+.+..+.+.+. ..++.++|+.+|.+.
T Consensus 672 -----------------------~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is 728 (755)
T KOG2100|consen 672 -----------------------SVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGIS 728 (755)
T ss_pred -----------------------cccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccc
Confidence 1222233333334 999999999999998887776662 268999999999887
Q ss_pred cC--CCchHHHHHHhhc
Q 016533 371 FT--DGMSDTIVKAVLT 385 (388)
Q Consensus 371 ~e--~~~~~~~i~~fl~ 385 (388)
.- -..+...+..|+.
T Consensus 729 ~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 729 YVEVISHLYEKLDRFLR 745 (755)
T ss_pred cccchHHHHHHHHHHHH
Confidence 64 3456666666664
No 119
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.14 E-value=1.8e-08 Score=88.70 Aligned_cols=125 Identities=13% Similarity=0.103 Sum_probs=86.2
Q ss_pred CeEEcCCCcEEEEEEcCCCCC---CCCceEEEEccCCC-----CCccccccccCCCCCccccccCchHHHHHHhCeEEEE
Q 016533 71 PRIKLRDGRHLAYKEHGVPKD---NAKYKIFFVHGFDS-----CRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVS 142 (388)
Q Consensus 71 ~~~~~~~g~~l~y~~~g~~~~---~~~~~vv~~HG~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~ 142 (388)
..+.......+..+.+.+... ...|.||++||.|. +...|+ .+ ...++.+.+..|++
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~---~~------------~~~~a~~~~~vvvS 128 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYD---SF------------CTRLAAELNCVVVS 128 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhH---HH------------HHHHHHHcCeEEEe
Confidence 344454555566666654322 34689999999883 244555 55 67777888999999
Q ss_pred eCCCCcCCCCCCCCCChhhHHHHHHHHHHH------hCCCCcEEEEEecccHHHHHHHHHhC------CcccceeEeecc
Q 016533 143 YDRAGYGESDPNPNRTVKSDALDIEELADQ------LGVGSKFYVIGYSMGGHPIWGCLKYI------PHRLAGAGLLAP 210 (388)
Q Consensus 143 ~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~------l~~~~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lil~~~ 210 (388)
+|+|=--+..-+ ..++|-.+.+.-+.++ .+. ++++|+|-|.||.+|..+|.+. +.++++.|++.|
T Consensus 129 VdYRLAPEh~~P--a~y~D~~~Al~w~~~~~~~~~~~D~-~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P 205 (336)
T KOG1515|consen 129 VDYRLAPEHPFP--AAYDDGWAALKWVLKNSWLKLGADP-SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYP 205 (336)
T ss_pred cCcccCCCCCCC--ccchHHHHHHHHHHHhHHHHhCCCc-ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEec
Confidence 999944333322 2455655555555553 255 6899999999999999888652 457999999999
Q ss_pred ccc
Q 016533 211 VVN 213 (388)
Q Consensus 211 ~~~ 213 (388)
...
T Consensus 206 ~~~ 208 (336)
T KOG1515|consen 206 FFQ 208 (336)
T ss_pred ccC
Confidence 864
No 120
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.13 E-value=4.8e-09 Score=91.02 Aligned_cols=240 Identities=14% Similarity=0.195 Sum_probs=128.0
Q ss_pred CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCC-----CChhh-----
Q 016533 92 NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPN-----RTVKS----- 161 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~----- 161 (388)
+.+|.+|.++|.|....... . .+ +...++++ |+..+.+..|-||.-.+... .+..|
T Consensus 90 ~~rp~~IhLagTGDh~f~rR-~-~l-----------~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRR-R-RL-----------MARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred CCCceEEEecCCCccchhhh-h-hh-----------hhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHH
Confidence 34788888999887554443 0 11 03556666 99999999999997654331 11212
Q ss_pred --HHHHHH---HHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHH-HhhcCCch
Q 016533 162 --DALDIE---ELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEA-YYQQLPQD 235 (388)
Q Consensus 162 --~~~dl~---~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 235 (388)
.+.+.. .+++.-|. .++.+.|.||||.+|...|..+|..|..+-++++... ...-.+. +....
T Consensus 156 ~~~i~E~~~Ll~Wl~~~G~-~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sA-------s~vFt~Gvls~~i--- 224 (348)
T PF09752_consen 156 RATILESRALLHWLEREGY-GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSA-------SVVFTEGVLSNSI--- 224 (348)
T ss_pred hHHHHHHHHHHHHHHhcCC-CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCC-------CcchhhhhhhcCC---
Confidence 122333 33444477 6999999999999999999999998887777776432 0000011 11111
Q ss_pred hHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHHhhccCcCC
Q 016533 236 QWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMMVGFGTWEF 315 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (388)
.|......+. ...+..... ................ ... .... .......+....+.
T Consensus 225 ~W~~L~~q~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~-------~~Ea-~~~m~~~md~~T~l-- 280 (348)
T PF09752_consen 225 NWDALEKQFE---------DTVYEEEIS--DIPAQNKSLPLDSMEE---RRR-------DREA-LRFMRGVMDSFTHL-- 280 (348)
T ss_pred CHHHHHHHhc---------ccchhhhhc--ccccCcccccchhhcc---ccc-------hHHH-HHHHHHHHHhhccc--
Confidence 1111111000 000000000 0000000000000000 000 0000 00011111111111
Q ss_pred CCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC--CCchHHHHHHhhc
Q 016533 316 DPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT--DGMSDTIVKAVLT 385 (388)
Q Consensus 316 ~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~ 385 (388)
... +.+.-.-.++++.+++|..+|......+.+..|++++..+++ ||.--+= .+.|.+.|.+-++
T Consensus 281 --~nf--~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 281 --TNF--PVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred --ccc--CCCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 111 122223338999999999999998889999999999999987 9965443 7788888887664
No 121
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.13 E-value=1.1e-09 Score=92.92 Aligned_cols=104 Identities=24% Similarity=0.338 Sum_probs=68.2
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCe--E--EEEeCCCCc----CCCC---CCC-------
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGV--Y--IVSYDRAGY----GESD---PNP------- 155 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~--~--vi~~D~~G~----G~S~---~~~------- 155 (388)
..+.||+||++++...+. .+ +..+..+.|. . ++.++--|+ |.=. ..+
T Consensus 11 ~tPTifihG~~gt~~s~~---~m------------i~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~ 75 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFN---HM------------INRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFE 75 (255)
T ss_dssp -EEEEEE--TTGGCCCCH---HH------------HHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEES
T ss_pred CCcEEEECCCCCChhHHH---HH------------HHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEec
Confidence 568999999999999999 77 6777623232 2 334444442 2211 111
Q ss_pred -C--CChhhHHHHHHHHHHHh----CCCCcEEEEEecccHHHHHHHHHhCCc-----ccceeEeeccccc
Q 016533 156 -N--RTVKSDALDIEELADQL----GVGSKFYVIGYSMGGHPIWGCLKYIPH-----RLAGAGLLAPVVN 213 (388)
Q Consensus 156 -~--~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lil~~~~~~ 213 (388)
. .+...+++.+..++..| ++ +++.+|||||||..++.++..+.. ++..+|.+++..+
T Consensus 76 ~n~~~~~~~qa~wl~~vl~~L~~~Y~~-~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 76 DNRNANYKKQAKWLKKVLKYLKKKYHF-KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp STT-CHHHHHHHHHHHHHHHHHHCC---SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhcCC-CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 1 25677888888888877 67 799999999999999999988642 5899999998654
No 122
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.10 E-value=8.2e-10 Score=117.49 Aligned_cols=100 Identities=14% Similarity=0.068 Sum_probs=84.5
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL 173 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 173 (388)
+++++++||++++...|. .+ ...+.. ++.|+.+|.+|+|.+. ...++++++++++.+.++.+
T Consensus 1068 ~~~l~~lh~~~g~~~~~~---~l------------~~~l~~--~~~v~~~~~~g~~~~~-~~~~~l~~la~~~~~~i~~~ 1129 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFS---VL------------SRYLDP--QWSIYGIQSPRPDGPM-QTATSLDEVCEAHLATLLEQ 1129 (1296)
T ss_pred CCCeEEecCCCCchHHHH---HH------------HHhcCC--CCcEEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHhh
Confidence 568999999999999988 77 444433 5899999999998763 34579999999999999987
Q ss_pred CCCCcEEEEEecccHHHHHHHHHh---CCcccceeEeeccc
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCLKY---IPHRLAGAGLLAPV 211 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lil~~~~ 211 (388)
....+++++||||||.++.++|.+ .++++..++++++.
T Consensus 1130 ~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1130 QPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 654589999999999999999985 57889999999874
No 123
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.07 E-value=1.7e-09 Score=86.69 Aligned_cols=165 Identities=16% Similarity=0.113 Sum_probs=107.1
Q ss_pred EEEEcCCCCCCCCceEEEEccCCCCCcc-ccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC-CcCCCCCCC----
Q 016533 82 AYKEHGVPKDNAKYKIFFVHGFDSCRHD-SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA-GYGESDPNP---- 155 (388)
Q Consensus 82 ~y~~~g~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~-G~G~S~~~~---- 155 (388)
.-+..|... ++..||++--+-+.... -. .. +...+..||.|+.+|+. |--.|...+
T Consensus 29 daYv~gs~~--~~~~li~i~DvfG~~~~n~r---~~-------------Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~ 90 (242)
T KOG3043|consen 29 DAYVVGSTS--SKKVLIVIQDVFGFQFPNTR---EG-------------ADKVALNGYTVLVPDFFRGDPWSPSLQKSER 90 (242)
T ss_pred eEEEecCCC--CCeEEEEEEeeeccccHHHH---HH-------------HHHHhcCCcEEEcchhhcCCCCCCCCChhhh
Confidence 334445442 34567776655544433 22 22 33334449999999985 312222111
Q ss_pred -----CCChhhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccccCCCCCCchhhHHH
Q 016533 156 -----NRTVKSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNYWWPGFPANLSKEA 227 (388)
Q Consensus 156 -----~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 227 (388)
..+.+-..+++..+++.+ +..++|.++|.+|||.++..+....| .+.+++..-|...
T Consensus 91 ~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~-------------- 155 (242)
T KOG3043|consen 91 PEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV-------------- 155 (242)
T ss_pred HHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC--------------
Confidence 135555566676666665 53479999999999999988888876 6777777766420
Q ss_pred HhhcCCchhHHHHHHhhcchhhhhhcccccccchhhhhccccccChhhHHHHhhcCCCchHHHHHHHhhchhhHHHHHHH
Q 016533 228 YYQQLPQDQWAVRVAHYIPWLTYWWNTQKWFLPSAVIAHRMDIFSRQDVEVLSKWSPEENNYMALARQQGEYESLHRDMM 307 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (388)
+.
T Consensus 156 --------------------------------------------d~---------------------------------- 157 (242)
T KOG3043|consen 156 --------------------------------------------DS---------------------------------- 157 (242)
T ss_pred --------------------------------------------Ch----------------------------------
Confidence 00
Q ss_pred hhccCcCCCCCCCCCCCCCCCccEEEEecCCCCCCcHHHHHHHHHhCC-----CceEEEeCCCCCCccc
Q 016533 308 VGFGTWEFDPLDLKNPFPNNEGSVHLWHGDEDRLVPVILQRYIVQRLP-----WIHYHELSGAGHMFPF 371 (388)
Q Consensus 308 ~~~~~~~~~~~~~~~p~~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~ 371 (388)
....++++||+++.|+.|.++|++....+.+.+. +.++.+++|.+|-.+.
T Consensus 158 --------------~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~ 212 (242)
T KOG3043|consen 158 --------------ADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVA 212 (242)
T ss_pred --------------hHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhh
Confidence 0122345669999999999999999888877773 2469999999997763
No 124
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=1.1e-08 Score=93.80 Aligned_cols=135 Identities=19% Similarity=0.117 Sum_probs=93.5
Q ss_pred ccCeEEcCCCcEEEEEEcCCCCC---CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC
Q 016533 69 TAPRIKLRDGRHLAYKEHGVPKD---NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR 145 (388)
Q Consensus 69 ~~~~~~~~~g~~l~y~~~g~~~~---~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 145 (388)
+...+....|..++...+.+..- ++-|+++++-|.++-....+-+..+ .++ --..++.+||-|+.+|-
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi-~yl--------R~~~LaslGy~Vv~IDn 684 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGI-QYL--------RFCRLASLGYVVVFIDN 684 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccce-ehh--------hhhhhhhcceEEEEEcC
Confidence 33445666777777676654321 2357999999999655444400011 011 12333446999999999
Q ss_pred CCcCCCCCCC---------CCChhhHHHHHHHHHHHhC---CCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 146 AGYGESDPNP---------NRTVKSDALDIEELADQLG---VGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 146 ~G~G~S~~~~---------~~~~~~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
||.-.-.... ...++|+++-+.-+.++.| . +++.+-|||+||+++++...+||+-++..|.=+|+.+
T Consensus 685 RGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidm-drV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~ 763 (867)
T KOG2281|consen 685 RGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDM-DRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTD 763 (867)
T ss_pred CCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccc-hheeEeccccccHHHHHHhhcCcceeeEEeccCccee
Confidence 9975543211 1378899999999988874 5 6999999999999999999999998888887777654
No 125
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.01 E-value=1.8e-09 Score=90.30 Aligned_cols=46 Identities=20% Similarity=0.179 Sum_probs=32.5
Q ss_pred CCCccEEEEecCCCCCCcHHHHHHHHHhCCC-ceEEEeCCCCCCcccC
Q 016533 326 NNEGSVHLWHGDEDRLVPVILQRYIVQRLPW-IHYHELSGAGHMFPFT 372 (388)
Q Consensus 326 ~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e 372 (388)
+|++|+|.|+|++|.+++++.++.+.+.+.+ .+++..++ ||.+...
T Consensus 159 ~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~g-GH~vP~~ 205 (212)
T PF03959_consen 159 KISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDG-GHHVPRK 205 (212)
T ss_dssp T---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESS-SSS----
T ss_pred cCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECC-CCcCcCC
Confidence 3567799999999999999999999999877 77888875 8988765
No 126
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.00 E-value=9.2e-08 Score=82.16 Aligned_cols=112 Identities=21% Similarity=0.302 Sum_probs=83.1
Q ss_pred eEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccc---cccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc
Q 016533 72 RIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAV---ANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY 148 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~ 148 (388)
.+.. |+..|--....-++..+...||++-|.++..+...+ .... +..+++..|.+|+.+++||.
T Consensus 116 ~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~------------~~~~ak~~~aNvl~fNYpGV 182 (365)
T PF05677_consen 116 PIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDW------------IQRFAKELGANVLVFNYPGV 182 (365)
T ss_pred EEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHH------------HHHHHHHcCCcEEEECCCcc
Confidence 3444 777776555544444567899999999987776210 0012 47788888999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHhC-----C-CCcEEEEEecccHHHHHHHHHhC
Q 016533 149 GESDPNPNRTVKSDALDIEELADQLG-----V-GSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 149 G~S~~~~~~~~~~~~~dl~~~l~~l~-----~-~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
|.|.+.. +.++++.|-.+.+++|. + .+.+++.|||+||.++...+.++
T Consensus 183 g~S~G~~--s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 183 GSSTGPP--SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ccCCCCC--CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 9998766 46899988888887772 1 26899999999999998876664
No 127
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.00 E-value=5.5e-09 Score=94.00 Aligned_cols=82 Identities=16% Similarity=0.218 Sum_probs=66.0
Q ss_pred HHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh---CCC-CcEEEEEecccHHHHHHHHHhCCccccee
Q 016533 130 QEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL---GVG-SKFYVIGYSMGGHPIWGCLKYIPHRLAGA 205 (388)
Q Consensus 130 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l---~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 205 (388)
...++. |+.|+.+.+. .++.++.++++.......+++.+ ..+ .|.+|+|.|.||..++.+|+.+|+.+.-+
T Consensus 94 G~AL~~-GHPvYFV~F~----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gpl 168 (581)
T PF11339_consen 94 GVALRA-GHPVYFVGFF----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPL 168 (581)
T ss_pred HHHHHc-CCCeEEEEec----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCce
Confidence 444444 8888888774 45566779999888877777765 221 38999999999999999999999999999
Q ss_pred EeeccccccCC
Q 016533 206 GLLAPVVNYWW 216 (388)
Q Consensus 206 il~~~~~~~~~ 216 (388)
|+-+...++|.
T Consensus 169 vlaGaPlsywa 179 (581)
T PF11339_consen 169 VLAGAPLSYWA 179 (581)
T ss_pred eecCCCccccc
Confidence 99999888875
No 128
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.98 E-value=1.6e-09 Score=90.34 Aligned_cols=50 Identities=16% Similarity=0.141 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHh-CC-CCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 162 DALDIEELADQL-GV-GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 162 ~~~dl~~~l~~l-~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
+.++..++++.. .+ .++|.|+|.|.||-+|+.+|..+| .|+++|.++|..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 334444444443 22 269999999999999999999998 899999999874
No 129
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.98 E-value=4.2e-09 Score=88.41 Aligned_cols=103 Identities=16% Similarity=0.107 Sum_probs=69.1
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHH-------hCeEEEEeCCCCcCCCCCCCCCChhhHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIED-------LGVYIVSYDRAGYGESDPNPNRTVKSDALD 165 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~g~~vi~~D~~G~G~S~~~~~~~~~~~~~d 165 (388)
.+.+||||||..++..++. .+ .....++ ..++++++|+......- .+..+.+..+.
T Consensus 3 ~g~pVlFIhG~~Gs~~q~r---sl------------~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~--~g~~l~~q~~~ 65 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVR---SL------------ASELQRKALLNDNSSHFDFFTVDFNEELSAF--HGRTLQRQAEF 65 (225)
T ss_pred CCCEEEEECcCCCCHhHHH---HH------------HHHHhhhhhhccCccceeEEEeccCcccccc--ccccHHHHHHH
Confidence 3779999999999998887 66 3333221 14789999987543211 12234444443
Q ss_pred HH----HHHHHh----CCCCcEEEEEecccHHHHHHHHHhCC---cccceeEeecccc
Q 016533 166 IE----ELADQL----GVGSKFYVIGYSMGGHPIWGCLKYIP---HRLAGAGLLAPVV 212 (388)
Q Consensus 166 l~----~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lil~~~~~ 212 (388)
+. .+++.. ...++++||||||||.++..++...+ +.|+.+|.++++.
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 33 333333 22379999999999999988887643 5799999999763
No 130
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.96 E-value=1.7e-08 Score=84.30 Aligned_cols=128 Identities=20% Similarity=0.231 Sum_probs=75.6
Q ss_pred CCCcEEEEEEcCCCCC---CC-CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC-CcCC
Q 016533 76 RDGRHLAYKEHGVPKD---NA-KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA-GYGE 150 (388)
Q Consensus 76 ~~g~~l~y~~~g~~~~---~~-~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~-G~G~ 150 (388)
+.|.+|-|+.+-+.+- +. -|.|||+||.+.....-. .... . ..+.+.....+.+|-|+++.+- =+-.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~---~~l~--s---g~gaiawa~pedqcfVlAPQy~~if~d 240 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND---KVLS--S---GIGAIAWAGPEDQCFVLAPQYNPIFAD 240 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh---hhhh--c---CccceeeecccCceEEEcccccccccc
Confidence 4688899998865221 12 388999999997766543 1100 0 0000111112223556665531 1122
Q ss_pred CCCCCCCChhhHHHHHHH-HHHHhCCC-CcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 151 SDPNPNRTVKSDALDIEE-LADQLGVG-SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 151 S~~~~~~~~~~~~~dl~~-~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
++.....-+....+-+.+ +.++.+++ .+|+++|.|+||+-++.++.++|+.+.+.+++++.
T Consensus 241 ~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 241 SEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred cccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 222222223333444442 33444553 68999999999999999999999999999999975
No 131
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.89 E-value=1.6e-08 Score=91.62 Aligned_cols=100 Identities=20% Similarity=0.311 Sum_probs=58.9
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc-CCC-----CC-----C-------C
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY-GES-----DP-----N-------P 155 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S-----~~-----~-------~ 155 (388)
-|+|||-||++++...|. .+ ..+|+.+ ||-|+++|+|.. +-. +. . .
T Consensus 100 ~PvvIFSHGlgg~R~~yS---~~------------~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~ 163 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYS---AI------------CGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLE 163 (379)
T ss_dssp EEEEEEE--TT--TTTTH---HH------------HHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT--------
T ss_pred CCEEEEeCCCCcchhhHH---HH------------HHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccc
Confidence 689999999999999998 77 6777766 999999999953 110 00 0 0
Q ss_pred -------CC-C----------hhhHHHHHHHHHHHh--------------------------CCCCcEEEEEecccHHHH
Q 016533 156 -------NR-T----------VKSDALDIEELADQL--------------------------GVGSKFYVIGYSMGGHPI 191 (388)
Q Consensus 156 -------~~-~----------~~~~~~dl~~~l~~l--------------------------~~~~~~~lvGhS~Gg~ia 191 (388)
.. . ++.-++++..+++.+ +. +++.++|||+||..+
T Consensus 164 ~~~~~~~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~-~~i~~~GHSFGGATa 242 (379)
T PF03403_consen 164 EEWIPLRDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDL-SRIGLAGHSFGGATA 242 (379)
T ss_dssp -EEEE-----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEE-EEEEEEEETHHHHHH
T ss_pred cceeccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcch-hheeeeecCchHHHH
Confidence 00 0 011133444444332 12 579999999999999
Q ss_pred HHHHHhCCcccceeEeeccc
Q 016533 192 WGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 192 ~~~a~~~p~~v~~lil~~~~ 211 (388)
+..+... .++++.|++++.
T Consensus 243 ~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 243 LQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp HHHHHH--TT--EEEEES--
T ss_pred HHHHhhc-cCcceEEEeCCc
Confidence 9988874 789999999986
No 132
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.88 E-value=1.1e-08 Score=80.94 Aligned_cols=97 Identities=27% Similarity=0.344 Sum_probs=72.2
Q ss_pred ceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh-
Q 016533 95 YKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL- 173 (388)
Q Consensus 95 ~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l- 173 (388)
..+||+-|=++-.. ++ .. +...+++.|+.|+.+|-+-|=.+. .++++.+.|+..++++.
T Consensus 3 t~~v~~SGDgGw~~-~d---~~------------~a~~l~~~G~~VvGvdsl~Yfw~~----rtP~~~a~Dl~~~i~~y~ 62 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LD---KQ------------IAEALAKQGVPVVGVDSLRYFWSE----RTPEQTAADLARIIRHYR 62 (192)
T ss_pred EEEEEEeCCCCchh-hh---HH------------HHHHHHHCCCeEEEechHHHHhhh----CCHHHHHHHHHHHHHHHH
Confidence 45778887766553 33 22 355555569999999987654443 47788888888888765
Q ss_pred ---CCCCcEEEEEecccHHHHHHHHHhCC----cccceeEeecccc
Q 016533 174 ---GVGSKFYVIGYSMGGHPIWGCLKYIP----HRLAGAGLLAPVV 212 (388)
Q Consensus 174 ---~~~~~~~lvGhS~Gg~ia~~~a~~~p----~~v~~lil~~~~~ 212 (388)
+. ++++|+|+|+|+-+.-....+-| ++|..++|+++..
T Consensus 63 ~~w~~-~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 63 ARWGR-KRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHhCC-ceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 55 79999999999988877777666 4799999999863
No 133
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.86 E-value=2.3e-08 Score=87.15 Aligned_cols=91 Identities=23% Similarity=0.237 Sum_probs=63.5
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc--CCCCCCC----CC---ChhhHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY--GESDPNP----NR---TVKSDA 163 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--G~S~~~~----~~---~~~~~~ 163 (388)
..|.||+-||.+++...|. .+ ...+...||-|..+|.+|- |...... .+ .+.+..
T Consensus 70 ~~PlvvlshG~Gs~~~~f~---~~-------------A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp 133 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFA---WL-------------AEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERP 133 (365)
T ss_pred cCCeEEecCCCCCCccchh---hh-------------HHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhccc
Confidence 3688999999999998888 66 5555556999999999984 4433111 11 223344
Q ss_pred HHHHHHHHHh-------------CCCCcEEEEEecccHHHHHHHHHhCCc
Q 016533 164 LDIEELADQL-------------GVGSKFYVIGYSMGGHPIWGCLKYIPH 200 (388)
Q Consensus 164 ~dl~~~l~~l-------------~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 200 (388)
.|+..+|+.| +. .+|.++|||+||+.++.++..+.+
T Consensus 134 ~dis~lLd~L~~~~~sP~l~~~ld~-~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 134 LDISALLDALLQLTASPALAGRLDP-QRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ccHHHHHHHHHHhhcCcccccccCc-cceEEEecccccHHHHHhcccccc
Confidence 4555444433 23 689999999999999999876543
No 134
>PRK04940 hypothetical protein; Provisional
Probab=98.85 E-value=6.4e-08 Score=76.58 Aligned_cols=53 Identities=13% Similarity=0.058 Sum_probs=38.1
Q ss_pred ChhhHHHHHHHHHHHh-C--CCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 158 TVKSDALDIEELADQL-G--VGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 158 ~~~~~~~dl~~~l~~l-~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
.+.+..+.+.+.+..+ . ..+++.|||.|+||+.|..++.++. -..|++||.+.
T Consensus 38 ~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g---~~aVLiNPAv~ 93 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG---IRQVIFNPNLF 93 (180)
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC---CCEEEECCCCC
Confidence 4445555556655532 1 1147999999999999999999986 25889999853
No 135
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.83 E-value=2.5e-08 Score=81.98 Aligned_cols=99 Identities=19% Similarity=0.200 Sum_probs=69.1
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCC----ChhhHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNR----TVKSDALDIEEL 169 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~----~~~~~~~dl~~~ 169 (388)
=|.|+|+||+......|. .+ +.++... ||-|+++++-..- .+... +....++++..-
T Consensus 46 yPVilF~HG~~l~ns~Ys---~l------------L~HIASH-GfIVVAPQl~~~~---~p~~~~Ei~~aa~V~~WL~~g 106 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYS---QL------------LAHIASH-GFIVVAPQLYTLF---PPDGQDEIKSAASVINWLPEG 106 (307)
T ss_pred ccEEEEeechhhhhHHHH---HH------------HHHHhhc-CeEEEechhhccc---CCCchHHHHHHHHHHHHHHhh
Confidence 578999999998888777 66 6666654 9999999996421 11111 122223333333
Q ss_pred HHHh-------CCCCcEEEEEecccHHHHHHHHHhCC--cccceeEeecccc
Q 016533 170 ADQL-------GVGSKFYVIGYSMGGHPIWGCLKYIP--HRLAGAGLLAPVV 212 (388)
Q Consensus 170 l~~l-------~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lil~~~~~ 212 (388)
++++ ++ .++.++|||.||-.|..+|..|. -.+.++|-++|+.
T Consensus 107 L~~~Lp~~V~~nl-~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 107 LQHVLPENVEANL-SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred hhhhCCCCccccc-ceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 3332 34 79999999999999999998874 3588999999874
No 136
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.82 E-value=1.5e-07 Score=75.77 Aligned_cols=56 Identities=14% Similarity=0.176 Sum_probs=44.5
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccCCCchHHHHHHhh
Q 016533 327 NEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFTDGMSDTIVKAVL 384 (388)
Q Consensus 327 i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~~~~~~~i~~fl 384 (388)
+++|.|-|.|+.|.++|.+.++.+++.+++..+..-+ +||++.... .+.+.|.+|+
T Consensus 162 i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~-~~~~~i~~fi 217 (230)
T KOG2551|consen 162 LSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKA-KYKEKIADFI 217 (230)
T ss_pred CCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCch-HHHHHHHHHH
Confidence 5666999999999999999999999999999776666 599988762 3444455554
No 137
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.81 E-value=5.8e-07 Score=73.34 Aligned_cols=106 Identities=17% Similarity=0.138 Sum_probs=80.0
Q ss_pred CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhC--eEEEEeCCCCcCCCC---C-------CCCCCh
Q 016533 92 NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLG--VYIVSYDRAGYGESD---P-------NPNRTV 159 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~---~-------~~~~~~ 159 (388)
..++.++++.|.+|....|. .+ ..++....+ +.++.+...||-.-. . ..-+++
T Consensus 27 ~~~~li~~IpGNPG~~gFY~---~F------------~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL 91 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYT---EF------------ARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSL 91 (301)
T ss_pred CCceEEEEecCCCCchhHHH---HH------------HHHHHHhcccccceeEEeccccccCCcccccccccccccccch
Confidence 34788999999999999988 77 666666554 568888888886432 1 123589
Q ss_pred hhHHHHHHHHHHHh-CCCCcEEEEEecccHHHHHHHHHhCC--cccceeEeecccc
Q 016533 160 KSDALDIEELADQL-GVGSKFYVIGYSMGGHPIWGCLKYIP--HRLAGAGLLAPVV 212 (388)
Q Consensus 160 ~~~~~dl~~~l~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lil~~~~~ 212 (388)
+++++.-.++++.. .-+.+++++|||.|+++.+++..... -.|.+++++=|..
T Consensus 92 ~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 92 QDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred hhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 99999888888654 44579999999999999999987432 2577788877764
No 138
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.77 E-value=2.3e-07 Score=81.27 Aligned_cols=59 Identities=19% Similarity=0.276 Sum_probs=44.1
Q ss_pred CccEEEEecCCCCCCcHHHHHHHHHhC-----CCceEEEeCCCCCCcccC--CCchHHHHHHhhcC
Q 016533 328 EGSVHLWHGDEDRLVPVILQRYIVQRL-----PWIHYHELSGAGHMFPFT--DGMSDTIVKAVLTG 386 (388)
Q Consensus 328 ~~Pvlii~G~~D~~~p~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~~ 386 (388)
++|++|.+|..|.++|+...+.+.+.+ .+++++.+++.+|....- .....+.|.+-|.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHCC
Confidence 567999999999999998877766554 357888889999986543 44455666666554
No 139
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.75 E-value=4.8e-08 Score=82.59 Aligned_cols=100 Identities=18% Similarity=0.215 Sum_probs=82.6
Q ss_pred ceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhC
Q 016533 95 YKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLG 174 (388)
Q Consensus 95 ~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~ 174 (388)
++|.++|+.+|....|. ++ ...+... ..|+.++.+|+|.- .....+++++++...+.|....
T Consensus 1 ~pLF~fhp~~G~~~~~~---~L------------~~~l~~~--~~v~~l~a~g~~~~-~~~~~~l~~~a~~yv~~Ir~~Q 62 (257)
T COG3319 1 PPLFCFHPAGGSVLAYA---PL------------AAALGPL--LPVYGLQAPGYGAG-EQPFASLDDMAAAYVAAIRRVQ 62 (257)
T ss_pred CCEEEEcCCCCcHHHHH---HH------------HHHhccC--ceeeccccCccccc-ccccCCHHHHHHHHHHHHHHhC
Confidence 47999999999999998 77 4444433 78999999999862 2334589999999988888887
Q ss_pred CCCcEEEEEecccHHHHHHHHHh---CCcccceeEeecccc
Q 016533 175 VGSKFYVIGYSMGGHPIWGCLKY---IPHRLAGAGLLAPVV 212 (388)
Q Consensus 175 ~~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lil~~~~~ 212 (388)
...+++|+|||+||.+|..+|.+ ..+.|..++++++..
T Consensus 63 P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~ 103 (257)
T COG3319 63 PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVP 103 (257)
T ss_pred CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCC
Confidence 76799999999999999999976 346799999999874
No 140
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.74 E-value=3e-07 Score=77.37 Aligned_cols=127 Identities=17% Similarity=0.191 Sum_probs=87.5
Q ss_pred eEEcCCCcEEEEEEcCCCCCC-CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCC---
Q 016533 72 RIKLRDGRHLAYKEHGVPKDN-AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAG--- 147 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~~-~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G--- 147 (388)
.+.. +|.+..|+.+-++..+ +.|.||.+||..++...+. ..+ . +..++++.||-|+.+|-..
T Consensus 39 s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~---~~s-----g-----~d~lAd~~gFlV~yPdg~~~~w 104 (312)
T COG3509 39 SFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQL---HGT-----G-----WDALADREGFLVAYPDGYDRAW 104 (312)
T ss_pred cccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhh---ccc-----c-----hhhhhcccCcEEECcCcccccc
Confidence 4544 6777888877655433 3578999999999998887 441 1 3888888899999995321
Q ss_pred ----cCCCCCCCC-CChhhHHHHHHH----HHHHhCCC-CcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 148 ----YGESDPNPN-RTVKSDALDIEE----LADQLGVG-SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 148 ----~G~S~~~~~-~~~~~~~~dl~~----~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
+|.+..+.. ..--+.+..|.+ ++.+.+++ .+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 105 n~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 105 NANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 222211111 112233334444 44444552 599999999999999999999999999999998764
No 141
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.71 E-value=1.1e-08 Score=90.60 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=65.2
Q ss_pred CCCceEEEEccCCCCC--ccccccccCCCCCccccccCchHHHHHH--hCeEEEEeCCCCcCCCCCCCCC-----ChhhH
Q 016533 92 NAKYKIFFVHGFDSCR--HDSAVANFLSPFMPILWCGGIYQEVIED--LGVYIVSYDRAGYGESDPNPNR-----TVKSD 162 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~vi~~D~~G~G~S~~~~~~-----~~~~~ 162 (388)
..+|++|++|||.++. ..|. ..+ ...++.. .++.||++||...-.. .| .....
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~--~~~------------~~all~~~~~d~NVI~VDWs~~a~~----~Y~~a~~n~~~v 130 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWI--QDM------------IKALLQKDTGDYNVIVVDWSRGASN----NYPQAVANTRLV 130 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHH--HHH------------HHHHHCC--S-EEEEEEE-HHHHSS-----HHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHH--HHH------------HHHHHhhccCCceEEEEcchhhccc----cccchhhhHHHH
Confidence 3589999999999888 3444 023 3455555 5799999999532211 12 23334
Q ss_pred HHHHHHHHHHh------CCCCcEEEEEecccHHHHHHHHHhCCc--ccceeEeeccccc
Q 016533 163 ALDIEELADQL------GVGSKFYVIGYSMGGHPIWGCLKYIPH--RLAGAGLLAPVVN 213 (388)
Q Consensus 163 ~~dl~~~l~~l------~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~ 213 (388)
.+.|..+|+.| .. ++++|||||+||++|-.++..... +|.+++.++|+..
T Consensus 131 g~~la~~l~~L~~~~g~~~-~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 131 GRQLAKFLSFLINNFGVPP-ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHHHHH---G-GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHHHHHHHHhhcCCCh-hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 44444444443 34 799999999999999999988777 8999999999864
No 142
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.69 E-value=1.4e-07 Score=75.41 Aligned_cols=102 Identities=19% Similarity=0.239 Sum_probs=67.1
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCC-------------------CC
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESD-------------------PN 154 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~-------------------~~ 154 (388)
..+||++||.+.+...|. .+ +..+-.+ +...|++.-|-.-.+. ..
T Consensus 3 ~atIi~LHglGDsg~~~~---~~------------~~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~ 66 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWA---QF------------LKQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE 66 (206)
T ss_pred eEEEEEEecCCCCCccHH---HH------------HHcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccch
Confidence 458999999999999886 44 3332222 3455555443221111 11
Q ss_pred CCCChhhHHHHHHHHHHHh---CC-CCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 155 PNRTVKSDALDIEELADQL---GV-GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 155 ~~~~~~~~~~dl~~~l~~l---~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
...++...++.+..++++. ++ ..++.+-|.|+||.+++..+..+|..+.+++-..+.
T Consensus 67 d~~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 67 DEEGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred hhhHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 1123444555666666653 32 157899999999999999999999888888888775
No 143
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.67 E-value=1.9e-07 Score=87.03 Aligned_cols=145 Identities=19% Similarity=0.161 Sum_probs=88.1
Q ss_pred cccCeEEcC--CCcEEEEEEcCCCCC-CCCceEEEEccCCCCCccccccccCCCCCccccc-cCc--hHHHHHHhCeEEE
Q 016533 68 VTAPRIKLR--DGRHLAYKEHGVPKD-NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWC-GGI--YQEVIEDLGVYIV 141 (388)
Q Consensus 68 ~~~~~~~~~--~g~~l~y~~~g~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~l~~~~g~~vi 141 (388)
....++.+. .+..++|+.+....+ ..+|.||.+.|.+|++..+.+.....|+.-.--. ..+ -+.-..+ -.+|+
T Consensus 11 ~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l 89 (415)
T PF00450_consen 11 QYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLL 89 (415)
T ss_dssp EEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEE
T ss_pred EEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceE
Confidence 345577776 678899988764432 3479999999999999887643344442110000 000 0001111 36899
Q ss_pred EeCCC-CcCCCCCCCC----CChhhHHHHHHHHHHHh-----C-CCCcEEEEEecccHHHHHHHHHh----C------Cc
Q 016533 142 SYDRA-GYGESDPNPN----RTVKSDALDIEELADQL-----G-VGSKFYVIGYSMGGHPIWGCLKY----I------PH 200 (388)
Q Consensus 142 ~~D~~-G~G~S~~~~~----~~~~~~~~dl~~~l~~l-----~-~~~~~~lvGhS~Gg~ia~~~a~~----~------p~ 200 (388)
.+|.| |.|.|..... .+.++.++|+.++|+.. . ...+++|.|.|+||..+-.+|.. . +-
T Consensus 90 ~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~i 169 (415)
T PF00450_consen 90 FIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKI 169 (415)
T ss_dssp EE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTS
T ss_pred EEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccc
Confidence 99965 9999964332 37788888888888765 1 12599999999999987666643 2 23
Q ss_pred ccceeEeeccccc
Q 016533 201 RLAGAGLLAPVVN 213 (388)
Q Consensus 201 ~v~~lil~~~~~~ 213 (388)
.++|+++.++.++
T Consensus 170 nLkGi~IGng~~d 182 (415)
T PF00450_consen 170 NLKGIAIGNGWID 182 (415)
T ss_dssp EEEEEEEESE-SB
T ss_pred ccccceecCcccc
Confidence 5889999999865
No 144
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.66 E-value=1.8e-07 Score=82.30 Aligned_cols=146 Identities=17% Similarity=0.178 Sum_probs=72.7
Q ss_pred CCccccCeEEcCCCcEEEEEEcCCCC-CCCCceEEEEccCCCCCccccccccCCCCCccccc--cCchHHHHHHhCeEEE
Q 016533 65 GPAVTAPRIKLRDGRHLAYKEHGVPK-DNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWC--GGIYQEVIEDLGVYIV 141 (388)
Q Consensus 65 ~~~~~~~~~~~~~g~~l~y~~~g~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~g~~vi 141 (388)
+...+...|.+.++.++..+..-+.. +.+-|.||++||-++......=...+.+-...-|. ...+..-+.++||-|+
T Consensus 85 GY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvl 164 (390)
T PF12715_consen 85 GYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVL 164 (390)
T ss_dssp TEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEE
T ss_pred CeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEE
Confidence 33444555666677666655443322 34568999999988665332100000000000000 0112344455699999
Q ss_pred EeCCCCcCCCCCCC------CCChhhH---------------HHHHHHHHHHhCC-----CCcEEEEEecccHHHHHHHH
Q 016533 142 SYDRAGYGESDPNP------NRTVKSD---------------ALDIEELADQLGV-----GSKFYVIGYSMGGHPIWGCL 195 (388)
Q Consensus 142 ~~D~~G~G~S~~~~------~~~~~~~---------------~~dl~~~l~~l~~-----~~~~~lvGhS~Gg~ia~~~a 195 (388)
++|.+|+|+..... .++.+.+ +-|....++.|.- .++|.++|+||||..++.++
T Consensus 165 a~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~La 244 (390)
T PF12715_consen 165 APDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLA 244 (390)
T ss_dssp EE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHH
T ss_pred EEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHH
Confidence 99999999875322 1121221 1223335555521 27999999999999999999
Q ss_pred HhCCcccceeEeeccc
Q 016533 196 KYIPHRLAGAGLLAPV 211 (388)
Q Consensus 196 ~~~p~~v~~lil~~~~ 211 (388)
+. .++|++.|..+-.
T Consensus 245 AL-DdRIka~v~~~~l 259 (390)
T PF12715_consen 245 AL-DDRIKATVANGYL 259 (390)
T ss_dssp HH--TT--EEEEES-B
T ss_pred Hc-chhhHhHhhhhhh
Confidence 98 6799888877754
No 145
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.64 E-value=2e-07 Score=78.82 Aligned_cols=104 Identities=19% Similarity=0.324 Sum_probs=71.5
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCe--EEEEeCCCCcCCCCCC--CCCChhhHHHHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGV--YIVSYDRAGYGESDPN--PNRTVKSDALDIEE 168 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~--~vi~~D~~G~G~S~~~--~~~~~~~~~~dl~~ 168 (388)
.+..+||+||+..+...-. .- ...+....+| .++.+.||+.|.-..- ...+...-..++.+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~---~r------------~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~ 81 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDAL---RR------------AAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALAR 81 (233)
T ss_pred CCeEEEEEeCCCCCHHHHH---HH------------HHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHH
Confidence 4789999999998866533 22 4556666555 6999999988763210 11133344455666
Q ss_pred HHHHh----CCCCcEEEEEecccHHHHHHHHHh----CC-----cccceeEeecccc
Q 016533 169 LADQL----GVGSKFYVIGYSMGGHPIWGCLKY----IP-----HRLAGAGLLAPVV 212 (388)
Q Consensus 169 ~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~----~p-----~~v~~lil~~~~~ 212 (388)
+|+.+ +. ++|+|++||||+.+.+..... .+ .++..+++++|-.
T Consensus 82 ~L~~L~~~~~~-~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 82 FLRDLARAPGI-KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred HHHHHHhccCC-ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 66655 44 799999999999999887644 21 3688999999864
No 146
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.61 E-value=1e-07 Score=78.83 Aligned_cols=86 Identities=17% Similarity=0.145 Sum_probs=47.5
Q ss_pred ceEEEEccCCC-CCccccccccCCCCCccccccCchHHHHHHhCeE---EEEeCCCCcCCCCCCC-CCChhhHHHHHHHH
Q 016533 95 YKIFFVHGFDS-CRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVY---IVSYDRAGYGESDPNP-NRTVKSDALDIEEL 169 (388)
Q Consensus 95 ~~vv~~HG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~---vi~~D~~G~G~S~~~~-~~~~~~~~~dl~~~ 169 (388)
.||||+||.++ ....|. .+ .+.|. +.||. |+++++-....+.... .....+.+++|.++
T Consensus 2 ~PVVlVHG~~~~~~~~w~---~~------------~~~l~-~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~f 65 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWS---TL------------APYLK-AAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAF 65 (219)
T ss_dssp --EEEE--TTTTTCGGCC---HH------------HHHHH-HTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHH---HH------------HHHHH-HcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHH
Confidence 47999999998 667787 66 45554 55998 8999994333221100 01112233444444
Q ss_pred H----HHhCCCCcEEEEEecccHHHHHHHHHhC
Q 016533 170 A----DQLGVGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 170 l----~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
+ ++-+- ++.||||||||.++-.+....
T Consensus 66 I~~Vl~~TGa--kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 66 IDAVLAYTGA--KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHT----EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHHhhCC--EEEEEEcCCcCHHHHHHHHHc
Confidence 4 44464 999999999999998887653
No 147
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.61 E-value=1.8e-07 Score=85.88 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=59.0
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHH----HHHHhCCCCcEEEEEecccHHHHHHHHHhCCcc---
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEE----LADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHR--- 201 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~----~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~--- 201 (388)
+..|.+ .||.+ ..|++|+|.+.+.. ...++..+++.+ +.+..+. ++++|+||||||.+++.++..+|+.
T Consensus 114 i~~L~~-~GY~~-~~dL~g~gYDwR~~-~~~~~~~~~Lk~lIe~~~~~~g~-~kV~LVGHSMGGlva~~fl~~~p~~~~k 189 (440)
T PLN02733 114 IEQLIK-WGYKE-GKTLFGFGYDFRQS-NRLPETMDGLKKKLETVYKASGG-KKVNIISHSMGGLLVKCFMSLHSDVFEK 189 (440)
T ss_pred HHHHHH-cCCcc-CCCcccCCCCcccc-ccHHHHHHHHHHHHHHHHHHcCC-CCEEEEEECHhHHHHHHHHHHCCHhHHh
Confidence 566554 58755 88999999987653 223444444444 4444555 7999999999999999999988864
Q ss_pred -cceeEeecccc
Q 016533 202 -LAGAGLLAPVV 212 (388)
Q Consensus 202 -v~~lil~~~~~ 212 (388)
|+++|.+++..
T Consensus 190 ~I~~~I~la~P~ 201 (440)
T PLN02733 190 YVNSWIAIAAPF 201 (440)
T ss_pred HhccEEEECCCC
Confidence 78899998764
No 148
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.58 E-value=4.7e-07 Score=77.31 Aligned_cols=126 Identities=17% Similarity=0.267 Sum_probs=81.2
Q ss_pred ccCeEEcCCCcEEEEE---EcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC
Q 016533 69 TAPRIKLRDGRHLAYK---EHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR 145 (388)
Q Consensus 69 ~~~~~~~~~g~~l~y~---~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 145 (388)
.+..+...||..|--. ..++...+.+..|+++-|..+-.+.= + +..- .+.||.|+.+++
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEvG-----~------------m~tP-~~lgYsvLGwNh 276 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEVG-----V------------MNTP-AQLGYSVLGWNH 276 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEee-----e------------ecCh-HHhCceeeccCC
Confidence 3445566666655432 22222222345677777766554432 2 2222 244899999999
Q ss_pred CCcCCCCCCCCC--ChhhHHHHHHHHHHHhCC-CCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 146 AGYGESDPNPNR--TVKSDALDIEELADQLGV-GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 146 ~G~G~S~~~~~~--~~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
||++.|.+.+.. +....-.-+...|+.|+. .+.|++.|||.||..+..+|..||+ |+++|+.+++-+
T Consensus 277 PGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 277 PGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred CCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhh
Confidence 999999865532 222222223345666764 2689999999999999999999996 899999887643
No 149
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.56 E-value=3.1e-06 Score=69.47 Aligned_cols=102 Identities=20% Similarity=0.232 Sum_probs=72.6
Q ss_pred ceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhC----eEEEEeCCCCc----CCCCC---CC--------
Q 016533 95 YKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLG----VYIVSYDRAGY----GESDP---NP-------- 155 (388)
Q Consensus 95 ~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g----~~vi~~D~~G~----G~S~~---~~-------- 155 (388)
-+.||+||.+++..... .+ +.++..+.. --++.+|--|- |.=+. .+
T Consensus 46 iPTIfIhGsgG~asS~~---~M------------v~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~ 110 (288)
T COG4814 46 IPTIFIHGSGGTASSLN---GM------------VNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFED 110 (288)
T ss_pred cceEEEecCCCChhHHH---HH------------HHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEec
Confidence 46899999999999988 76 777776521 13556666652 11111 11
Q ss_pred -CCChhhHHHHHHHHHHHh----CCCCcEEEEEecccHHHHHHHHHhCCc-----ccceeEeecccc
Q 016533 156 -NRTVKSDALDIEELADQL----GVGSKFYVIGYSMGGHPIWGCLKYIPH-----RLAGAGLLAPVV 212 (388)
Q Consensus 156 -~~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lil~~~~~ 212 (388)
..+..++...+..++..| ++ +++.+|||||||.-...|+..|.+ .++.+|.+++..
T Consensus 111 n~~s~~~~s~wlk~~msyL~~~Y~i-~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 111 NTASGLDQSKWLKKAMSYLQKHYNI-PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred CcCchhhHHHHHHHHHHHHHHhcCC-ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 125667777777777666 67 799999999999999999988643 488899888764
No 150
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.56 E-value=7.2e-07 Score=74.62 Aligned_cols=74 Identities=18% Similarity=0.148 Sum_probs=56.3
Q ss_pred CeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh---CCcccceeEeeccc
Q 016533 137 GVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKY---IPHRLAGAGLLAPV 211 (388)
Q Consensus 137 g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lil~~~~ 211 (388)
++.|+.+|.+|++.+... ..+.+++++.+...+.......+++++|||+||.++..++.. .++.+.+++++++.
T Consensus 25 ~~~v~~~~~~g~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 25 RRDVSALPLPGFGPGEPL-PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred CccEEEecCCCCCCCCCC-CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 479999999999876543 346777777665555443323689999999999999998876 45679999988865
No 151
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.55 E-value=2.1e-06 Score=79.76 Aligned_cols=135 Identities=16% Similarity=0.127 Sum_probs=91.9
Q ss_pred ccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHH--HHHHhCeEEEEeCCC
Q 016533 69 TAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQE--VIEDLGVYIVSYDRA 146 (388)
Q Consensus 69 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~g~~vi~~D~~ 146 (388)
....++..||++|+...+-+....+.|+++..+-++-....+.+.... ...+. .....||.|+..|.|
T Consensus 20 ~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~----------~~~p~~~~~aa~GYavV~qDvR 89 (563)
T COG2936 20 RDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQL----------SALPQPAWFAAQGYAVVNQDVR 89 (563)
T ss_pred eeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchh----------hcccccceeecCceEEEEeccc
Confidence 345788899999999999876556678888888333222211100011 00121 233449999999999
Q ss_pred CcCCCCCCCC--CC-hhhHHHHHHHHHHHhCC-CCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 147 GYGESDPNPN--RT-VKSDALDIEELADQLGV-GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 147 G~G~S~~~~~--~~-~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
|.|.|++.-. .+ -.+..-|+.+.+..... +.++..+|.|++|...+.+|+..|.-+++++...+..+
T Consensus 90 G~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 90 GRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 9999996543 23 22223345555544422 36999999999999999999999999999999888765
No 152
>COG3150 Predicted esterase [General function prediction only]
Probab=98.51 E-value=2.4e-06 Score=65.40 Aligned_cols=90 Identities=20% Similarity=0.280 Sum_probs=70.2
Q ss_pred EEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCC
Q 016533 97 IFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVG 176 (388)
Q Consensus 97 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~ 176 (388)
||++||+.++..... +.+..+ .+..|.|-.+.|.+....++...++.++.++..++-
T Consensus 2 ilYlHGFnSSP~shk------------------a~l~~q----~~~~~~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~- 58 (191)
T COG3150 2 ILYLHGFNSSPGSHK------------------AVLLLQ----FIDEDVRDIEYSTPHLPHDPQQALKELEKAVQELGD- 58 (191)
T ss_pred eEEEecCCCCcccHH------------------HHHHHH----HHhccccceeeecCCCCCCHHHHHHHHHHHHHHcCC-
Confidence 899999999888776 333332 244556666677777778999999999999999987
Q ss_pred CcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 177 SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 177 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
+...|+|-|+||+.|.+++.++. ++ .|++||.+
T Consensus 59 ~~p~ivGssLGGY~At~l~~~~G--ir-av~~NPav 91 (191)
T COG3150 59 ESPLIVGSSLGGYYATWLGFLCG--IR-AVVFNPAV 91 (191)
T ss_pred CCceEEeecchHHHHHHHHHHhC--Ch-hhhcCCCc
Confidence 57999999999999999999874 33 45667764
No 153
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.43 E-value=0.00015 Score=66.54 Aligned_cols=144 Identities=18% Similarity=0.217 Sum_probs=91.1
Q ss_pred CccccCeEEcC--CCcEEEEEEcCCCCC-CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHH-----hC
Q 016533 66 PAVTAPRIKLR--DGRHLAYKEHGVPKD-NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIED-----LG 137 (388)
Q Consensus 66 ~~~~~~~~~~~--~g~~l~y~~~g~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~g 137 (388)
......++.+. .+..++|+......+ ..+|.||.+.|.+|.+..-.++..+.||.-. ..+ ..|... .-
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~--~~G--~tL~~N~ySWnk~ 117 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVK--YNG--KTLYLNPYSWNKE 117 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEc--CCC--CcceeCCcccccc
Confidence 34456688876 589999988865443 2378999999999888654533355554321 000 001100 01
Q ss_pred eEEEEeCCC-CcCCCCCCCC----CChhhHHHHHHHHHHHh-C-----CCCcEEEEEecccHHHHHHHHHh----C----
Q 016533 138 VYIVSYDRA-GYGESDPNPN----RTVKSDALDIEELADQL-G-----VGSKFYVIGYSMGGHPIWGCLKY----I---- 198 (388)
Q Consensus 138 ~~vi~~D~~-G~G~S~~~~~----~~~~~~~~dl~~~l~~l-~-----~~~~~~lvGhS~Gg~ia~~~a~~----~---- 198 (388)
..++-+|.| |.|.|-.... .+-+..++|+..++... . .+.+++|.|-|++|...-.+|.. .
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~ 197 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCC 197 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccccc
Confidence 478999998 8888753221 24455667766666432 1 13699999999999877666643 2
Q ss_pred --CcccceeEeeccccc
Q 016533 199 --PHRLAGAGLLAPVVN 213 (388)
Q Consensus 199 --p~~v~~lil~~~~~~ 213 (388)
+-.++|+++=+|..+
T Consensus 198 ~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 198 KPNINLKGYAIGNGLTD 214 (454)
T ss_pred CCcccceEEEecCcccC
Confidence 125789999888875
No 154
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.39 E-value=9.6e-07 Score=79.02 Aligned_cols=100 Identities=22% Similarity=0.225 Sum_probs=77.7
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeE---EEEeCCCCcCCCCCCCCCChhhHHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVY---IVSYDRAGYGESDPNPNRTVKSDALDIEELA 170 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l 170 (388)
.-++|++||++.+...|. .+ .......|+. ++.+++++. ....+.....+.+.+-|.+++
T Consensus 59 ~~pivlVhG~~~~~~~~~---~~-------------~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ql~~~V~~~l 121 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFL---PL-------------DYRLAILGWLTNGVYAFELSGG-DGTYSLAVRGEQLFAYVDEVL 121 (336)
T ss_pred CceEEEEccCcCCcchhh---hh-------------hhhhcchHHHhccccccccccc-CCCccccccHHHHHHHHHHHH
Confidence 458999999998888888 66 4445555665 888888765 222222335566666777777
Q ss_pred HHhCCCCcEEEEEecccHHHHHHHHHhCC--cccceeEeeccc
Q 016533 171 DQLGVGSKFYVIGYSMGGHPIWGCLKYIP--HRLAGAGLLAPV 211 (388)
Q Consensus 171 ~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lil~~~~ 211 (388)
...+- +++.++||||||.++..++..++ .+|+.++.++++
T Consensus 122 ~~~ga-~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 122 AKTGA-KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred hhcCC-CceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 77787 89999999999999999999988 899999999976
No 155
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.38 E-value=0.0002 Score=63.34 Aligned_cols=106 Identities=13% Similarity=0.036 Sum_probs=67.8
Q ss_pred CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCC--cCCCCC----------C--CC-
Q 016533 92 NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAG--YGESDP----------N--PN- 156 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G--~G~S~~----------~--~~- 156 (388)
+....||++||.+.+...-.+..++ ..-+.+.||.++++.+|. ...... . ..
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~L-------------R~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~ 151 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPL-------------RRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQL 151 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHH-------------HHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCc
Confidence 4467999999999887643311133 555566799999999987 111100 0 00
Q ss_pred --C-------------Chh----hHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCCc-ccceeEeeccc
Q 016533 157 --R-------------TVK----SDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIPH-RLAGAGLLAPV 211 (388)
Q Consensus 157 --~-------------~~~----~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lil~~~~ 211 (388)
. ..+ .+.+-|.+.+..+ +. .+++|+||+.|+..++.+....+. .++++|++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~-~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 152 SQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG-KNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred CCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 0 011 1222233333333 43 569999999999999999988764 58999999985
No 156
>PLN02209 serine carboxypeptidase
Probab=98.38 E-value=0.00014 Score=67.20 Aligned_cols=144 Identities=19% Similarity=0.217 Sum_probs=85.1
Q ss_pred ccCeEEcCC--CcEEEEEEcCCCCC-CCCceEEEEccCCCCCccccccccCCCCCccccc-cCchHHH------HHHhCe
Q 016533 69 TAPRIKLRD--GRHLAYKEHGVPKD-NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWC-GGIYQEV------IEDLGV 138 (388)
Q Consensus 69 ~~~~~~~~~--g~~l~y~~~g~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l------~~~~g~ 138 (388)
...++.+.+ +..++|+......+ ...|.|+++.|.+|++..+.+...+.|+.-.--. .+....+ -.+ -.
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~a 118 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTK-TA 118 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhh-cC
Confidence 345666643 56788877754432 2379999999999988776532244442200000 0000011 011 25
Q ss_pred EEEEeCC-CCcCCCCCCC--C-CChhhHHHHHHHHHHHh-----C-CCCcEEEEEecccHHHHHHHHHh----C------
Q 016533 139 YIVSYDR-AGYGESDPNP--N-RTVKSDALDIEELADQL-----G-VGSKFYVIGYSMGGHPIWGCLKY----I------ 198 (388)
Q Consensus 139 ~vi~~D~-~G~G~S~~~~--~-~~~~~~~~dl~~~l~~l-----~-~~~~~~lvGhS~Gg~ia~~~a~~----~------ 198 (388)
+++.+|. .|.|.|-... . .+-++.++|+.++++.. . ...+++|.|.|+||..+-.+|.. .
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 8999995 5889885322 1 23334556776666553 1 12589999999999877666643 1
Q ss_pred CcccceeEeeccccc
Q 016533 199 PHRLAGAGLLAPVVN 213 (388)
Q Consensus 199 p~~v~~lil~~~~~~ 213 (388)
+-.++|+++.++..+
T Consensus 199 ~inl~Gi~igng~td 213 (437)
T PLN02209 199 PINLQGYVLGNPITH 213 (437)
T ss_pred ceeeeeEEecCcccC
Confidence 125789999998764
No 157
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.37 E-value=5.4e-05 Score=69.95 Aligned_cols=145 Identities=17% Similarity=0.188 Sum_probs=84.6
Q ss_pred ccccCeEEcCC--CcEEEEEEcCCCCC-CCCceEEEEccCCCCCccccccccCCCCCccc--cccCchHHH------HHH
Q 016533 67 AVTAPRIKLRD--GRHLAYKEHGVPKD-NAKYKIFFVHGFDSCRHDSAVANFLSPFMPIL--WCGGIYQEV------IED 135 (388)
Q Consensus 67 ~~~~~~~~~~~--g~~l~y~~~g~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l------~~~ 135 (388)
.....++.+.+ +..++|+......+ ...|.|+.+.|.+|++..+.+...+.|+.-.. .. .....+ -.+
T Consensus 36 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~-~~~~~l~~n~~sW~~ 114 (433)
T PLN03016 36 ELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFN-GSAPSLFSTTYSWTK 114 (433)
T ss_pred eEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccC-CCCCceeeCCCchhh
Confidence 34466777754 56788887654322 34799999999998887443222554532100 00 000011 011
Q ss_pred hCeEEEEeC-CCCcCCCCCCC--CCC-hhhHHHHHHHHHHHh-----C-CCCcEEEEEecccHHHHHHHHHh----C---
Q 016533 136 LGVYIVSYD-RAGYGESDPNP--NRT-VKSDALDIEELADQL-----G-VGSKFYVIGYSMGGHPIWGCLKY----I--- 198 (388)
Q Consensus 136 ~g~~vi~~D-~~G~G~S~~~~--~~~-~~~~~~dl~~~l~~l-----~-~~~~~~lvGhS~Gg~ia~~~a~~----~--- 198 (388)
-.+++.+| ..|.|.|-... ..+ -++.++++.+++... . .+.+++|.|.|+||..+-.+|.. .
T Consensus 115 -~anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~ 193 (433)
T PLN03016 115 -MANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 193 (433)
T ss_pred -cCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccc
Confidence 26899999 55999986322 221 123345655555442 1 12689999999999977666543 1
Q ss_pred ---CcccceeEeeccccc
Q 016533 199 ---PHRLAGAGLLAPVVN 213 (388)
Q Consensus 199 ---p~~v~~lil~~~~~~ 213 (388)
+-.++|+++-+|..+
T Consensus 194 ~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 194 CEPPINLQGYMLGNPVTY 211 (433)
T ss_pred cCCcccceeeEecCCCcC
Confidence 125789999998653
No 158
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.33 E-value=3.7e-05 Score=70.69 Aligned_cols=51 Identities=14% Similarity=0.064 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHh-CC---CCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 161 SDALDIEELADQL-GV---GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 161 ~~~~dl~~~l~~l-~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
.++++|.-++++. .. .++.+|+|+||||..++.++.++|+.+.+++.+++.
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 3456666666654 11 257899999999999999999999999999999986
No 159
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.33 E-value=7.4e-06 Score=69.32 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=65.1
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCC------CC-CC-----C----
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESD------PN-PN-----R---- 157 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~------~~-~~-----~---- 157 (388)
-|.|||-||++++...|. .+ ...++.. ||-|.+++.|-+-.+. .+ .+ +
T Consensus 118 ~PvvvFSHGLggsRt~YS---a~------------c~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir 181 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYS---AY------------CTSLASH-GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIR 181 (399)
T ss_pred ccEEEEecccccchhhHH---HH------------hhhHhhC-ceEEEEeecccCcceeEEEecccccCCcccccceEee
Confidence 488999999999999998 66 5666554 9999999998654331 10 00 0
Q ss_pred Ch-----------h---hHHHH---HHHHHHHhC----------------------C-CCcEEEEEecccHHHHHHHHHh
Q 016533 158 TV-----------K---SDALD---IEELADQLG----------------------V-GSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 158 ~~-----------~---~~~~d---l~~~l~~l~----------------------~-~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
.+ + .-+++ ...+++.++ + ..++.++|||+||..++.....
T Consensus 182 ~v~~~ekef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~ 261 (399)
T KOG3847|consen 182 LVEANEKEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSS 261 (399)
T ss_pred eeccCceeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcc
Confidence 00 0 11122 222333321 0 1578999999999999877776
Q ss_pred CCcccceeEeeccc
Q 016533 198 IPHRLAGAGLLAPV 211 (388)
Q Consensus 198 ~p~~v~~lil~~~~ 211 (388)
+ ..++..|+++..
T Consensus 262 ~-t~FrcaI~lD~W 274 (399)
T KOG3847|consen 262 H-TDFRCAIALDAW 274 (399)
T ss_pred c-cceeeeeeeeee
Confidence 4 457777777754
No 160
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.32 E-value=5.8e-06 Score=60.18 Aligned_cols=60 Identities=23% Similarity=0.258 Sum_probs=54.9
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC-CCchHHHHHHhhcC
Q 016533 327 NEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 327 i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
...|+|++.++.|+.+|.+.++.+++.+++++++++++.||..+.. ..-+.+++.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 3588999999999999999999999999999999999999999866 77789999999974
No 161
>PLN02606 palmitoyl-protein thioesterase
Probab=98.29 E-value=9.5e-06 Score=69.53 Aligned_cols=98 Identities=14% Similarity=0.182 Sum_probs=64.0
Q ss_pred ceEEEEccCC--CCCccccccccCCCCCccccccCchHHHHHHh-CeEEEEeCCCCcCCCCCCCC--CChhhHHHHHHHH
Q 016533 95 YKIFFVHGFD--SCRHDSAVANFLSPFMPILWCGGIYQEVIEDL-GVYIVSYDRAGYGESDPNPN--RTVKSDALDIEEL 169 (388)
Q Consensus 95 ~~vv~~HG~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~~--~~~~~~~~dl~~~ 169 (388)
.+||+.||++ .+...+. .+ ..+..+. |+.+..+. .|-+ .... ..+.++++.+.+.
T Consensus 27 ~PvViwHGlgD~~~~~~~~---~~-------------~~~i~~~~~~pg~~v~-ig~~---~~~s~~~~~~~Qv~~vce~ 86 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVS---NL-------------TQFLINHSGYPGTCVE-IGNG---VQDSLFMPLRQQASIACEK 86 (306)
T ss_pred CCEEEECCCCcccCCchHH---HH-------------HHHHHhCCCCCeEEEE-ECCC---cccccccCHHHHHHHHHHH
Confidence 4799999999 4444454 44 5555522 55444444 2222 1112 2455666666655
Q ss_pred HHHh-CCCCcEEEEEecccHHHHHHHHHhCCc--ccceeEeecccc
Q 016533 170 ADQL-GVGSKFYVIGYSMGGHPIWGCLKYIPH--RLAGAGLLAPVV 212 (388)
Q Consensus 170 l~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~~ 212 (388)
++.. .+.+-++++|+|.||.++-.++++.|+ .|+.+|.+++.-
T Consensus 87 l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 87 IKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred HhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 5442 122469999999999999999999987 599999999753
No 162
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.25 E-value=2.5e-05 Score=62.85 Aligned_cols=105 Identities=17% Similarity=0.216 Sum_probs=76.0
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL 173 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 173 (388)
+..|||+-|++..-.... ++.+ ....+.+.+|.++-+-.+.+-. .....++++.++|+..+++++
T Consensus 36 ~~~vvfiGGLgdgLl~~~---y~~~----------L~~~lde~~wslVq~q~~Ssy~--G~Gt~slk~D~edl~~l~~Hi 100 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICL---YTTM----------LNRYLDENSWSLVQPQLRSSYN--GYGTFSLKDDVEDLKCLLEHI 100 (299)
T ss_pred EEEEEEEcccCCCccccc---cHHH----------HHHHHhhccceeeeeecccccc--ccccccccccHHHHHHHHHHh
Confidence 467999999987765544 3211 3455566689998887763210 011248899999999999988
Q ss_pred CC---CCcEEEEEecccHHHHHHHHHh--CCcccceeEeeccccc
Q 016533 174 GV---GSKFYVIGYSMGGHPIWGCLKY--IPHRLAGAGLLAPVVN 213 (388)
Q Consensus 174 ~~---~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lil~~~~~~ 213 (388)
+. ..+++|+|||-|+.-.+.|..+ .+..|.+.|+.+|+.+
T Consensus 101 ~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 101 QLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred hccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 54 2489999999999988888843 4667888999998865
No 163
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.22 E-value=1.1e-05 Score=75.55 Aligned_cols=85 Identities=24% Similarity=0.282 Sum_probs=64.9
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCCCCCC--------CChhhHHHHHHHHHHHhC------CCCcEEEEEecccHHHHHHH
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESDPNPN--------RTVKSDALDIEELADQLG------VGSKFYVIGYSMGGHPIWGC 194 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~~~~~--------~~~~~~~~dl~~~l~~l~------~~~~~~lvGhS~Gg~ia~~~ 194 (388)
+..++++.|--|+++++|-+|.|.+..+ .+.++..+|+..+++++. .+.|++++|-|+||++|..+
T Consensus 51 ~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~ 130 (434)
T PF05577_consen 51 MWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWF 130 (434)
T ss_dssp HHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHH
Confidence 6788888899999999999999986432 278888999999888763 22589999999999999999
Q ss_pred HHhCCcccceeEeeccccc
Q 016533 195 LKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 195 a~~~p~~v~~lil~~~~~~ 213 (388)
-.+||+.|.+.+..++++.
T Consensus 131 r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 131 RLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHH-TTT-SEEEEET--CC
T ss_pred HhhCCCeeEEEEeccceee
Confidence 9999999999999987764
No 164
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.15 E-value=7.5e-05 Score=63.91 Aligned_cols=57 Identities=9% Similarity=-0.026 Sum_probs=47.8
Q ss_pred CccEEEEecCCCCCCcHHHHHHHHHhCC----CceEEEeCCCCCCcccC--CCchHHHHHHhh
Q 016533 328 EGSVHLWHGDEDRLVPVILQRYIVQRLP----WIHYHELSGAGHMFPFT--DGMSDTIVKAVL 384 (388)
Q Consensus 328 ~~Pvlii~G~~D~~~p~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl 384 (388)
.+|-|+++++.|.+++.+..++..+... +++...++++.|..++. |+++.+.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4569999999999999988777766542 36788889999999986 999999999885
No 165
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.15 E-value=1.3e-05 Score=73.79 Aligned_cols=45 Identities=16% Similarity=0.260 Sum_probs=38.2
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhCC-CceEEEeCCCCCCccc
Q 016533 327 NEGSVHLWHGDEDRLVPVILQRYIVQRLP-WIHYHELSGAGHMFPF 371 (388)
Q Consensus 327 i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~~~~i~~~gH~~~~ 371 (388)
++.||||+.|..|..++++..+.+.++.. ..+++++.+++|.+-.
T Consensus 303 mk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 303 MKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred cCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 33449999999999999999999999984 5689999999997543
No 166
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.14 E-value=4.7e-05 Score=65.42 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=66.7
Q ss_pred ceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHh-CeEEEEeCCCCcCCCCCCCCC--ChhhHHHHHHHHHH
Q 016533 95 YKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDL-GVYIVSYDRAGYGESDPNPNR--TVKSDALDIEELAD 171 (388)
Q Consensus 95 ~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~~~--~~~~~~~dl~~~l~ 171 (388)
.++|+.||+|.+...-.+ ..+ ..+++.. |..+.++.. |.+ ....+ .+.++++.+.+-++
T Consensus 26 ~P~ViwHG~GD~c~~~g~-~~~-------------~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~ 87 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATN-ANF-------------TQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVK 87 (314)
T ss_pred CCeEEecCCCcccCCchH-HHH-------------HHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHh
Confidence 479999999976654220 022 5555443 566666654 333 12222 56667776666665
Q ss_pred Hh-CCCCcEEEEEecccHHHHHHHHHhCCc--ccceeEeecccc
Q 016533 172 QL-GVGSKFYVIGYSMGGHPIWGCLKYIPH--RLAGAGLLAPVV 212 (388)
Q Consensus 172 ~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~~ 212 (388)
.. .+.+-++++|+|.||.++-.++++.|+ .|+.+|.+++.-
T Consensus 88 ~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 88 QMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred hchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 42 122469999999999999999999987 599999999753
No 167
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.12 E-value=5.5e-05 Score=69.96 Aligned_cols=134 Identities=19% Similarity=0.174 Sum_probs=87.3
Q ss_pred CCccccCeEEcCCCcEEEEEEcCCC-CCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEe
Q 016533 65 GPAVTAPRIKLRDGRHLAYKEHGVP-KDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSY 143 (388)
Q Consensus 65 ~~~~~~~~~~~~~g~~l~y~~~g~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 143 (388)
+...++.+.+..||++|.|...+.. +.++.|++|+--|...-+..-.+. .. ....+++ |..-+..
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs-~~------------~~~WLer-Gg~~v~A 456 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFS-GS------------RKLWLER-GGVFVLA 456 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccc-hh------------hHHHHhc-CCeEEEE
Confidence 4455666777789999999877521 123678887666544333321100 22 3333444 7777888
Q ss_pred CCCCcCCCCC---------CCCCChhhHHHHHHHHHHHhCC--CCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 144 DRAGYGESDP---------NPNRTVKSDALDIEELADQLGV--GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 144 D~~G~G~S~~---------~~~~~~~~~~~dl~~~l~~l~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
+.||=|+=.+ .....++|+.+-.+++++. ++ .+++.+-|-|-||.+.-....++||.+.++|+--|..
T Consensus 457 NIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 457 NIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred ecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 9999876432 1122445555555555443 22 2689999999999998888889999999999988875
Q ss_pred c
Q 016533 213 N 213 (388)
Q Consensus 213 ~ 213 (388)
+
T Consensus 536 D 536 (648)
T COG1505 536 D 536 (648)
T ss_pred h
Confidence 4
No 168
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.09 E-value=0.00019 Score=58.92 Aligned_cols=79 Identities=22% Similarity=0.256 Sum_probs=53.3
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeE-EEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVY-IVSYDRAGYGESDPNPNRTVKSDALDIEELADQ 172 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~ 172 (388)
+..|||..|+|.+...+. .+ . +.. +|. ++++|+|-.- ++. | .
T Consensus 11 ~~LilfF~GWg~d~~~f~---hL------------~--~~~--~~D~l~~yDYr~l~---------~d~---~------~ 53 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFS---HL------------I--LPE--NYDVLICYDYRDLD---------FDF---D------L 53 (213)
T ss_pred CeEEEEEecCCCChHHhh---hc------------c--CCC--CccEEEEecCcccc---------ccc---c------c
Confidence 568999999999998876 44 1 111 344 5778887221 110 1 1
Q ss_pred hCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 173 LGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 173 l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
.+. +.+.||++|||=.+|..+.... .++..|.+++..
T Consensus 54 ~~y-~~i~lvAWSmGVw~A~~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 54 SGY-REIYLVAWSMGVWAANRVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred ccC-ceEEEEEEeHHHHHHHHHhccC--CcceeEEEECCC
Confidence 134 7999999999999998887654 366777777654
No 169
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.08 E-value=1e-05 Score=67.89 Aligned_cols=89 Identities=20% Similarity=0.164 Sum_probs=48.6
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHH-hCeEEEEeCCCCcCCCCCCCCCChhhH----HHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIED-LGVYIVSYDRAGYGESDPNPNRTVKSD----ALDIE 167 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~----~~dl~ 167 (388)
+...|||+||+.++...|. .+ ...+... ..+.-..+...++.........+++.. +++|.
T Consensus 3 ~~hLvV~vHGL~G~~~d~~---~~------------~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~ 67 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMR---YL------------KNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEIL 67 (217)
T ss_pred CCEEEEEeCCCCCCHHHHH---HH------------HHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHH
Confidence 3568999999999999988 55 2333320 011111112222211111112234444 44444
Q ss_pred HHHHHhCCC-CcEEEEEecccHHHHHHHHH
Q 016533 168 ELADQLGVG-SKFYVIGYSMGGHPIWGCLK 196 (388)
Q Consensus 168 ~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~ 196 (388)
+.++..... .++++|||||||.++-.+..
T Consensus 68 ~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 68 EHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HhccccccccccceEEEecccHHHHHHHHH
Confidence 444444331 48999999999999866554
No 170
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.07 E-value=6e-06 Score=71.26 Aligned_cols=52 Identities=12% Similarity=0.059 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHh-CCC-CcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 162 DALDIEELADQL-GVG-SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 162 ~~~dl~~~l~~l-~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
+.++|...|+.. ... ++..|+|+||||..|+.++.+||+.+.+++.++|...
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 455667676653 332 2389999999999999999999999999999998753
No 171
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.06 E-value=6.3e-05 Score=60.11 Aligned_cols=106 Identities=20% Similarity=0.311 Sum_probs=73.7
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC--CCc---CCCCCCC-------------
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR--AGY---GESDPNP------------- 155 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~--~G~---G~S~~~~------------- 155 (388)
-|+|.++.|+..+...+. .+.- +...+.++|+.|+.+|- ||. |+++...
T Consensus 44 ~P~lf~LSGLTCT~~Nfi-~Ksg------------~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~ 110 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFI-EKSG------------FQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQ 110 (283)
T ss_pred CceEEEecCCcccchhhH-hhhh------------HHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEeccc
Confidence 478999999999888775 1222 46777778999999996 443 2222100
Q ss_pred -----CCC-hhhHHHHHHHHHHH----hCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 156 -----NRT-VKSDALDIEELADQ----LGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 156 -----~~~-~~~~~~dl~~~l~~----l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
.|. .+-.++++.++++. ++. .++.|.||||||+=|+..+.+.|.+.+++-..+|..+
T Consensus 111 epw~~~yrMYdYv~kELp~~l~~~~~pld~-~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 111 EPWAKHYRMYDYVVKELPQLLNSANVPLDP-LKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred chHhhhhhHHHHHHHHHHHHhccccccccc-hhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 011 22234455555552 234 5799999999999999999999999998888888754
No 172
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.05 E-value=0.00014 Score=64.16 Aligned_cols=109 Identities=27% Similarity=0.206 Sum_probs=82.2
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCC----------C-ChhhH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPN----------R-TVKSD 162 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----------~-~~~~~ 162 (388)
+.+|+|.-|.-++-+.|. .-.=| +-.++.+.+.-+|..++|-+|+|.+-.. | +.++-
T Consensus 80 ~gPIffYtGNEGdie~Fa---~ntGF---------m~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQA 147 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFA---NNTGF---------MWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQA 147 (492)
T ss_pred CCceEEEeCCcccHHHHH---hccch---------HHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHH
Confidence 468999999998887766 32101 4566777788899999999999974221 1 55666
Q ss_pred HHHHHHHHHHhCC-----CCcEEEEEecccHHHHHHHHHhCCcccceeEeecccccc
Q 016533 163 ALDIEELADQLGV-----GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVNY 214 (388)
Q Consensus 163 ~~dl~~~l~~l~~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~ 214 (388)
.+|..+++.++.- ..+++.+|-|+||+++..+=.+||+.+.|.+..+.++-+
T Consensus 148 LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl~ 204 (492)
T KOG2183|consen 148 LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVLY 204 (492)
T ss_pred HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceEe
Confidence 6777777777632 268999999999999999999999999888777765543
No 173
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.05 E-value=0.00016 Score=59.87 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=46.6
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC--CCchHHHHHHhhc
Q 016533 331 VHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT--DGMSDTIVKAVLT 385 (388)
Q Consensus 331 vlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~ 385 (388)
++++.+++|..+|......+.+..|++++..++ +||.--+- .+.|.+.|.+-|+
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~ 364 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLD 364 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHH
Confidence 788899999999998899999999999999998 59965543 8888888888775
No 174
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.02 E-value=0.00058 Score=60.93 Aligned_cols=110 Identities=18% Similarity=0.231 Sum_probs=67.0
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCC--CCCCCCCChhhHHHHHHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGE--SDPNPNRTVKSDALDIEELA 170 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~--S~~~~~~~~~~~~~dl~~~l 170 (388)
+.|+||++||+|-.-.... ..--++.- +..++. ...++++|+--... -+..-...+.+.++-...++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p---~qi~~L~~------i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv 189 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTP---SQIEFLLN------IYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLV 189 (374)
T ss_pred CCcEEEEEcCCeeEecCCH---HHHHHHHH------HHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHH
Confidence 4699999999984443332 11000000 122333 34788888864320 01111234555566666666
Q ss_pred HHhCCCCcEEEEEecccHHHHHHHHHhC--C---cccceeEeecccccc
Q 016533 171 DQLGVGSKFYVIGYSMGGHPIWGCLKYI--P---HRLAGAGLLAPVVNY 214 (388)
Q Consensus 171 ~~l~~~~~~~lvGhS~Gg~ia~~~a~~~--p---~~v~~lil~~~~~~~ 214 (388)
+..|. ++++|+|-|.||.+++.+...- + ..-+++|+++|.+..
T Consensus 190 ~~~G~-~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 190 ESEGN-KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred hccCC-CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 66677 7999999999999998877542 1 124799999998764
No 175
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.00 E-value=0.00011 Score=70.00 Aligned_cols=102 Identities=12% Similarity=0.145 Sum_probs=64.8
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHH--------H-------hCeEEEEeCCCCcCCCCCCCCC
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIE--------D-------LGVYIVSYDRAGYGESDPNPNR 157 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~-------~g~~vi~~D~~G~G~S~~~~~~ 157 (388)
++-+|+|++|..|+..+.+ .+ ...... + ..|+.+++|+-+ +-..-.+.
T Consensus 88 sGIPVLFIPGNAGSyKQvR---Si------------AS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE--e~tAm~G~ 150 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVR---SI------------ASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE--EFTAMHGH 150 (973)
T ss_pred CCceEEEecCCCCchHHHH---HH------------HHHHhhhhcCCchhhhhcccCccccceEEEcccc--hhhhhccH
Confidence 4779999999999988877 55 222221 0 135666666631 00111234
Q ss_pred ChhhHHHHHHHHHHHh-----C-------CCCcEEEEEecccHHHHHHHHHh---CCcccceeEeeccc
Q 016533 158 TVKSDALDIEELADQL-----G-------VGSKFYVIGYSMGGHPIWGCLKY---IPHRLAGAGLLAPV 211 (388)
Q Consensus 158 ~~~~~~~dl~~~l~~l-----~-------~~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lil~~~~ 211 (388)
++.++++-+.+.|+.+ + ..+.++++||||||.+|...+.. .++.|.-++..+++
T Consensus 151 ~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 151 ILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 7788888777777654 2 12459999999999999877754 23456666666644
No 176
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.94 E-value=3.6e-05 Score=67.00 Aligned_cols=105 Identities=24% Similarity=0.391 Sum_probs=67.4
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCe--EEEEeCCCCcCCCCCCC--CCChhhHHHHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGV--YIVSYDRAGYGESDPNP--NRTVKSDALDIEE 168 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~--~vi~~D~~G~G~S~~~~--~~~~~~~~~dl~~ 168 (388)
.+..+||+||+..+-..-- .- ......+.|+ ..+.+.||..|.--.-. ..+.+.-..+++.
T Consensus 115 ~k~vlvFvHGfNntf~dav---~R------------~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~ 179 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAV---YR------------TAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALER 179 (377)
T ss_pred CCeEEEEEcccCCchhHHH---HH------------HHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHH
Confidence 4779999999986655422 11 3455555454 56889999776532110 1122333444555
Q ss_pred HHHHh----CCCCcEEEEEecccHHHHHHHHHh--------CCcccceeEeeccccc
Q 016533 169 LADQL----GVGSKFYVIGYSMGGHPIWGCLKY--------IPHRLAGAGLLAPVVN 213 (388)
Q Consensus 169 ~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~--------~p~~v~~lil~~~~~~ 213 (388)
+|..| .. ++++|++||||.++.++...+ -+.+|+-+|+.+|-.+
T Consensus 180 ~lr~La~~~~~-~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 180 LLRYLATDKPV-KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred HHHHHHhCCCC-ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 55544 45 799999999999999887654 2346889999998643
No 177
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.90 E-value=0.0001 Score=70.45 Aligned_cols=108 Identities=16% Similarity=0.116 Sum_probs=67.0
Q ss_pred CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhC-eEEEEeCCC-C---cCCCCC---CCCCChhhHH
Q 016533 92 NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLG-VYIVSYDRA-G---YGESDP---NPNRTVKSDA 163 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~~vi~~D~~-G---~G~S~~---~~~~~~~~~~ 163 (388)
+..|+||++||.+-....-.. .. ...+..+.+ +.|+++++| | +..+.. +.+..+.|+.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~--~~------------~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~ 158 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSL--YP------------GDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQR 158 (493)
T ss_pred CCCCEEEEEcCCccccCCCCC--CC------------hHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHH
Confidence 347899999997632222110 01 245555544 999999999 3 332221 1123344443
Q ss_pred H---HHHHHHHHhCC-CCcEEEEEecccHHHHHHHHHh--CCcccceeEeeccccc
Q 016533 164 L---DIEELADQLGV-GSKFYVIGYSMGGHPIWGCLKY--IPHRLAGAGLLAPVVN 213 (388)
Q Consensus 164 ~---dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lil~~~~~~ 213 (388)
. .|.+-++..+. .++|+|+|+|.||..+..++.. .+..++++|++++...
T Consensus 159 ~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 159 LALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 3 33344444443 2699999999999999888776 2456899999987654
No 178
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.79 E-value=1.2e-05 Score=71.05 Aligned_cols=58 Identities=19% Similarity=0.212 Sum_probs=47.2
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHhCCC--ceEEEeCCCCCCcccC-CC---chHHHHHHhhcC
Q 016533 329 GSVHLWHGDEDRLVPVILQRYIVQRLPW--IHYHELSGAGHMFPFT-DG---MSDTIVKAVLTG 386 (388)
Q Consensus 329 ~Pvlii~G~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e-~~---~~~~~i~~fl~~ 386 (388)
+|+|+++|.+|.++|...+..+++.... .+...+++++|..... .. +..+.+.+|+.+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 5699999999999999999998888765 5777888999998875 33 567777777754
No 179
>COG0627 Predicted esterase [General function prediction only]
Probab=97.67 E-value=0.00029 Score=61.97 Aligned_cols=108 Identities=15% Similarity=0.168 Sum_probs=71.8
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC--------------CcCCCC---CCC
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA--------------GYGESD---PNP 155 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~--------------G~G~S~---~~~ 155 (388)
.-|+++++||..++...+..... ++......|+.++++|-. |-+.|- ...
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g-------------~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~ 119 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDG-------------LRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQ 119 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccc-------------hhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceeccccc
Confidence 35778888998888655541112 366677778888876332 333321 100
Q ss_pred -----C-CChhhH-HHHHHHHHH-HhCCCC---cEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 156 -----N-RTVKSD-ALDIEELAD-QLGVGS---KFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 156 -----~-~~~~~~-~~dl~~~l~-~l~~~~---~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
. +.++++ .+++-..++ +..... +..++||||||.=|+.+|.++|++++.+..+++..+
T Consensus 120 ~~~~~~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 120 PPWASGPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred CccccCccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 1 344443 445664444 444222 789999999999999999999999999999998865
No 180
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.60 E-value=0.00043 Score=63.53 Aligned_cols=75 Identities=21% Similarity=0.276 Sum_probs=51.6
Q ss_pred hHHHHHHhCeEE------EEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhCC
Q 016533 129 YQEVIEDLGVYI------VSYDRAGYGESDPNPNRTVKSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 129 ~~~l~~~~g~~v------i~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
+..|. +.||.. .-+|+|= | + ...+++...+...|+.. . ++|++||||||||.++..+....+
T Consensus 71 i~~L~-~~GY~~~~~l~~~pYDWR~---~---~-~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 71 IENLE-KLGYDRGKDLFAAPYDWRL---S---P-AERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHH-hcCcccCCEEEEEeechhh---c---h-hhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhcc
Confidence 56665 447642 2378871 1 1 13445556666666543 3 489999999999999999998874
Q ss_pred c------ccceeEeecccc
Q 016533 200 H------RLAGAGLLAPVV 212 (388)
Q Consensus 200 ~------~v~~lil~~~~~ 212 (388)
+ .|+++|.++++.
T Consensus 142 ~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 142 QEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred chhhHHhhhhEEEEeCCCC
Confidence 3 599999999864
No 181
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.54 E-value=0.0014 Score=56.09 Aligned_cols=36 Identities=17% Similarity=0.024 Sum_probs=33.5
Q ss_pred CcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 177 SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 177 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
..-+|.|.|+||.+++..+..||+++..++..+|..
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 567999999999999999999999999999999874
No 182
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.50 E-value=0.00013 Score=62.25 Aligned_cols=101 Identities=20% Similarity=0.272 Sum_probs=56.2
Q ss_pred CceEEEEccCCCCCc---cccccccCCCCCccccccCchHHHHHHh--CeEEEEeCCCCcCCC-CCCCC--CChhhHHHH
Q 016533 94 KYKIFFVHGFDSCRH---DSAVANFLSPFMPILWCGGIYQEVIEDL--GVYIVSYDRAGYGES-DPNPN--RTVKSDALD 165 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~vi~~D~~G~G~S-~~~~~--~~~~~~~~d 165 (388)
..+||+.||+|.+.. .+. .+ ..+.++. |..|.+++. |-+.+ +.... ....++++.
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~---~i-------------~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~ 67 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMG---SI-------------KELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQ 67 (279)
T ss_dssp S--EEEE--TT--S--TTTHH---HH-------------HHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHH
T ss_pred CCcEEEEEcCccccCChhHHH---HH-------------HHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHH
Confidence 568999999997542 344 33 4554443 677888877 22211 11111 245666666
Q ss_pred HHHHHHHh-CCCCcEEEEEecccHHHHHHHHHhCCc-ccceeEeeccc
Q 016533 166 IEELADQL-GVGSKFYVIGYSMGGHPIWGCLKYIPH-RLAGAGLLAPV 211 (388)
Q Consensus 166 l~~~l~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lil~~~~ 211 (388)
+.+.++.. .+.+-++++|+|.||.++-.++.++|+ .|+.+|.+++.
T Consensus 68 vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 68 VCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp HHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred HHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 77666653 122579999999999999999999875 69999999975
No 183
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.42 E-value=0.00097 Score=60.89 Aligned_cols=115 Identities=16% Similarity=0.108 Sum_probs=72.2
Q ss_pred EEEEEcCCC-CCCCCceEEEEccCC---CCCcc--ccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC-C-cCCCC
Q 016533 81 LAYKEHGVP-KDNAKYKIFFVHGFD---SCRHD--SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA-G-YGESD 152 (388)
Q Consensus 81 l~y~~~g~~-~~~~~~~vv~~HG~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~-G-~G~S~ 152 (388)
|+.-.|-+. ..++.|++|+|||.+ ++... |+ -..|.++.++-|+++++| | .|.-+
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd-----------------gs~La~~g~vVvVSvNYRLG~lGfL~ 142 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD-----------------GSALAARGDVVVVSVNYRLGALGFLD 142 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC-----------------hHHHHhcCCEEEEEeCcccccceeee
Confidence 444444433 334579999999977 33332 33 256766644999999998 2 23221
Q ss_pred ---CC--C----CCChhhHH---HHHHHHHHHhCC-CCcEEEEEecccHHHHHHHHHh--CCcccceeEeecccc
Q 016533 153 ---PN--P----NRTVKSDA---LDIEELADQLGV-GSKFYVIGYSMGGHPIWGCLKY--IPHRLAGAGLLAPVV 212 (388)
Q Consensus 153 ---~~--~----~~~~~~~~---~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lil~~~~~ 212 (388)
-. . +..+.|++ +.+.+-|+++|- .++|.|+|+|.||+.++.+.+. ....+.++|+.++..
T Consensus 143 ~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 143 LSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred hhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 11 1 12344443 355666667753 2689999999999988877765 223678888888765
No 184
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.40 E-value=0.00093 Score=64.58 Aligned_cols=103 Identities=14% Similarity=0.080 Sum_probs=60.6
Q ss_pred CCceEEEEccCCC---CC--ccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC----CcCCCC---CC-CCCCh
Q 016533 93 AKYKIFFVHGFDS---CR--HDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA----GYGESD---PN-PNRTV 159 (388)
Q Consensus 93 ~~~~vv~~HG~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~G~S~---~~-~~~~~ 159 (388)
..|++|+|||.+- +. ..+. ...++...++-||++++| |+-.+. .+ .++.+
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~-----------------~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYD-----------------GASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGH-----------------THHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH
T ss_pred ccceEEEeecccccCCCccccccc-----------------ccccccCCCEEEEEecccccccccccccccccCchhhhh
Confidence 3599999999773 22 2222 255666668999999998 333222 22 34455
Q ss_pred hhHHHH---HHHHHHHhCC-CCcEEEEEecccHHHHHHHHHhC--CcccceeEeecccc
Q 016533 160 KSDALD---IEELADQLGV-GSKFYVIGYSMGGHPIWGCLKYI--PHRLAGAGLLAPVV 212 (388)
Q Consensus 160 ~~~~~d---l~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lil~~~~~ 212 (388)
.|+... |.+-|...|- .++|.|+|||.||..+...+..- ...+.++|+.++..
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 555443 3344444442 26999999999999887766551 25799999999854
No 185
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.37 E-value=0.0017 Score=59.18 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=85.2
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCC--------CChhhHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPN--------RTVKSDAL 164 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--------~~~~~~~~ 164 (388)
.+|.-|+|-|=+.-...|...+.. .+..++++.|-.|+.+++|-+|.|.+... .+.++...
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~-----------~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALa 153 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENL-----------TWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALA 153 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcc-----------hHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHH
Confidence 477788888877666566411111 15778888899999999999998865432 26778888
Q ss_pred HHHHHHHHhCC----C--CcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 165 DIEELADQLGV----G--SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 165 dl~~~l~~l~~----~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
|+.++|++++. . .|.+.+|-|+-|.++..+=..||+.|.|-|..++++.
T Consensus 154 Dla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 154 DLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 99999988743 1 3899999999999999999999999999888887653
No 186
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.37 E-value=0.018 Score=54.63 Aligned_cols=130 Identities=18% Similarity=0.154 Sum_probs=84.5
Q ss_pred cCeEEcCCCcEEEEEEc---CCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC
Q 016533 70 APRIKLRDGRHLAYKEH---GVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA 146 (388)
Q Consensus 70 ~~~~~~~~g~~l~y~~~---g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 146 (388)
...++..||+++-.... ....+.+.|.+|..-|.-+.+..-.| .. ..-.|+ ++||--.....|
T Consensus 421 riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~F--s~-----------~~lSLl-DRGfiyAIAHVR 486 (682)
T COG1770 421 RIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSF--SI-----------ARLSLL-DRGFVYAIAHVR 486 (682)
T ss_pred EEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCc--cc-----------ceeeee-cCceEEEEEEee
Confidence 33445568877654322 12223446777776665444332221 11 012334 448766666778
Q ss_pred CcCCCCC---------CCCCChhhHHHHHHHHHHHh-CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 147 GYGESDP---------NPNRTVKSDALDIEELADQL-GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 147 G~G~S~~---------~~~~~~~~~~~dl~~~l~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
|=|+-.. ....++.|+++....+++.= .-.+.++++|-|.||+++-..+...|+.++++|+-.|+++
T Consensus 487 GGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 487 GGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred cccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 8765431 12358888888888888653 2226899999999999999999999999999999999876
No 187
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.37 E-value=0.0098 Score=53.13 Aligned_cols=60 Identities=15% Similarity=0.318 Sum_probs=47.2
Q ss_pred CccEEEEecCCCCCCcHHHHHHHHHhCC------------------------C-ceEEEeCCCCCCcccCCCchHHHHHH
Q 016533 328 EGSVHLWHGDEDRLVPVILQRYIVQRLP------------------------W-IHYHELSGAGHMFPFTDGMSDTIVKA 382 (388)
Q Consensus 328 ~~Pvlii~G~~D~~~p~~~~~~~~~~~~------------------------~-~~~~~i~~~gH~~~~e~~~~~~~i~~ 382 (388)
.++||+..|+.|.+++.-..+.+.+.+. + .++.++.++||+.+..|+...+.+..
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 3679999999999999876666655541 2 45667779999996339999999999
Q ss_pred hhcCC
Q 016533 383 VLTGD 387 (388)
Q Consensus 383 fl~~~ 387 (388)
|+.+.
T Consensus 313 fi~~~ 317 (319)
T PLN02213 313 WISGQ 317 (319)
T ss_pred HHcCC
Confidence 99864
No 188
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.35 E-value=0.0014 Score=58.78 Aligned_cols=56 Identities=13% Similarity=0.045 Sum_probs=45.1
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhCCC-ceEEEeCCCCCCcccCCCchHHHHHHhh
Q 016533 327 NEGSVHLWHGDEDRLVPVILQRYIVQRLPW-IHYHELSGAGHMFPFTDGMSDTIVKAVL 384 (388)
Q Consensus 327 i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~~~~~~~i~~fl 384 (388)
++.|.++|.|..|++..+.....+.+.+|+ ..+..+|+++|.... ..+.+.+..|+
T Consensus 261 L~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~ 317 (367)
T PF10142_consen 261 LTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFY 317 (367)
T ss_pred cCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHH
Confidence 455599999999999999999999999986 458899999998776 34455555554
No 189
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.30 E-value=0.0036 Score=56.19 Aligned_cols=36 Identities=25% Similarity=0.173 Sum_probs=32.1
Q ss_pred CcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 177 SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 177 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
-+++++|+|.||++|...|.-.|..+++++=-++..
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 389999999999999999999999999988777654
No 190
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.28 E-value=0.0039 Score=58.53 Aligned_cols=131 Identities=17% Similarity=0.190 Sum_probs=83.9
Q ss_pred cccCeEEcCCCcEEEEEEc---CCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeC
Q 016533 68 VTAPRIKLRDGRHLAYKEH---GVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYD 144 (388)
Q Consensus 68 ~~~~~~~~~~g~~l~y~~~---g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 144 (388)
.+..++...||..+-.... ....+.++|.+|..+|.-+-+-.-. +++ .-..+++ +|+-....|
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~----f~~---------srl~lld-~G~Vla~a~ 506 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPS----FRA---------SRLSLLD-RGWVLAYAN 506 (712)
T ss_pred EEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccc----ccc---------ceeEEEe-cceEEEEEe
Confidence 3455667778876543222 1122234676666665443222211 100 0122333 588888889
Q ss_pred CCCcCCCC---CC------CCCChhhHHHHHHHHHHHh--CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 145 RAGYGESD---PN------PNRTVKSDALDIEELADQL--GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 145 ~~G~G~S~---~~------~~~~~~~~~~dl~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
.||=|+=. .. ...+++|+....+.+++.= .. ++..+.|.|.||.++..++..+|+.+.++|+-.|+.+
T Consensus 507 VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~-~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 507 VRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP-SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred eccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc-cceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 99977543 11 1247777777777777642 33 7999999999999999999999999999999888765
No 191
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.22 E-value=0.0027 Score=53.14 Aligned_cols=98 Identities=18% Similarity=0.189 Sum_probs=66.2
Q ss_pred ceEEEEccCCCCCcc--ccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcC--CCCCCCCCChhhHHHHHHHHH
Q 016533 95 YKIFFVHGFDSCRHD--SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYG--ESDPNPNRTVKSDALDIEELA 170 (388)
Q Consensus 95 ~~vv~~HG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G--~S~~~~~~~~~~~~~dl~~~l 170 (388)
.++|++||++.+... +. .+ .+.+.+.-|..|++.|. |-| .|. -..+.++++.+.+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~---~~------------~q~l~~~~g~~v~~lei-g~g~~~s~---l~pl~~Qv~~~ce~v 84 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMA---NL------------TQLLEELPGSPVYCLEI-GDGIKDSS---LMPLWEQVDVACEKV 84 (296)
T ss_pred CCEEEEeccCcccccchHH---HH------------HHHHHhCCCCeeEEEEe-cCCcchhh---hccHHHHHHHHHHHH
Confidence 478999999988776 33 33 23333333788999987 344 111 124556666666655
Q ss_pred HHh-CCCCcEEEEEecccHHHHHHHHHhCCc-ccceeEeeccc
Q 016533 171 DQL-GVGSKFYVIGYSMGGHPIWGCLKYIPH-RLAGAGLLAPV 211 (388)
Q Consensus 171 ~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lil~~~~ 211 (388)
+.. .+.+-+.++|.|.||.++-.++...++ .|+.+|.+++.
T Consensus 85 ~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 85 KQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred hcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 533 123579999999999999999987654 58888888864
No 192
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.22 E-value=0.00065 Score=43.95 Aligned_cols=47 Identities=19% Similarity=0.246 Sum_probs=28.9
Q ss_pred CCccccCeEEcCCCcEEEEEEcCCCC-----CCCCceEEEEccCCCCCcccc
Q 016533 65 GPAVTAPRIKLRDGRHLAYKEHGVPK-----DNAKYKIFFVHGFDSCRHDSA 111 (388)
Q Consensus 65 ~~~~~~~~~~~~~g~~l~y~~~g~~~-----~~~~~~vv~~HG~~~~~~~~~ 111 (388)
+.+.++..+++.||.-|.......+. ...+++|++.||+.+++..|-
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 56778889999999999877664433 235889999999999999986
No 193
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.19 E-value=0.01 Score=47.53 Aligned_cols=122 Identities=16% Similarity=0.106 Sum_probs=71.5
Q ss_pred EEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHH---Hh--CeEEEEeCCCCcCCC-----
Q 016533 82 AYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIE---DL--GVYIVSYDRAGYGES----- 151 (388)
Q Consensus 82 ~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~--g~~vi~~D~~G~G~S----- 151 (388)
.....|+++ ..+.+.++++|.+.+..... .- .... ...+...+.. .. +=.|-++.|.||-.-
T Consensus 8 aava~GD~d-~A~~Vav~VPG~~t~~~~~~---~~--~~~~--~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~ 79 (177)
T PF06259_consen 8 AAVAVGDPD-TADHVAVLVPGTGTTLDSFL---GG--MDDE--ARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLP 79 (177)
T ss_pred EEEEECCcC-CcCeeEEEcCCCCCCccccc---ch--hHHH--HHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccc
Confidence 455667765 45778999999997776543 10 0000 0000011111 11 224545555554322
Q ss_pred CCCCCCChhhHHHHHHHHHHHhC----CCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 152 DPNPNRTVKSDALDIEELADQLG----VGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 152 ~~~~~~~~~~~~~dl~~~l~~l~----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
+......-++-+.+|..+++.|. .+.++.++|||+|+.++-..+...+..++.+++++++
T Consensus 80 ~a~~~~~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 80 DAASPGYARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred cccCchHHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 11111123455667777777663 2358999999999999998888867889999999864
No 194
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.17 E-value=0.011 Score=50.03 Aligned_cols=114 Identities=8% Similarity=-0.061 Sum_probs=75.8
Q ss_pred EEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCC-CCCCCChh
Q 016533 82 AYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESD-PNPNRTVK 160 (388)
Q Consensus 82 ~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~-~~~~~~~~ 160 (388)
++....+....+.|.||++-.+.+...... . .. +..++.. ..|+..||----.-. ....++++
T Consensus 91 ~F~r~~~~~r~pdPkvLivapmsGH~aTLL-R-~T------------V~alLp~--~~vyitDW~dAr~Vp~~~G~Fdld 154 (415)
T COG4553 91 HFERDMPDARKPDPKVLIVAPMSGHYATLL-R-GT------------VEALLPY--HDVYITDWVDARMVPLEAGHFDLD 154 (415)
T ss_pred hhhhccccccCCCCeEEEEecccccHHHHH-H-HH------------HHHhccc--cceeEeeccccceeecccCCccHH
Confidence 344444444445678888877776655433 0 22 4666654 478888986332222 12246899
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEecccHH-----HHHHHHHhCCcccceeEeeccccc
Q 016533 161 SDALDIEELADQLGVGSKFYVIGYSMGGH-----PIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 161 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~-----ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
++++-+.++++.+|. .+++++.+.=+. ++++-+...|..-..++++++.++
T Consensus 155 DYIdyvie~~~~~Gp--~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 155 DYIDYVIEMINFLGP--DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred HHHHHHHHHHHHhCC--CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 999999999999997 488888887754 444444556777889999998765
No 195
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.92 E-value=0.011 Score=47.65 Aligned_cols=113 Identities=13% Similarity=0.210 Sum_probs=62.3
Q ss_pred CCceEEEEccCCC-CCcccc---c-cccCCCCCccccccCchHHHHHHhCeEEEEeCCCC---cCCCCCCCCCChhhHHH
Q 016533 93 AKYKIFFVHGFDS-CRHDSA---V-ANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAG---YGESDPNPNRTVKSDAL 164 (388)
Q Consensus 93 ~~~~vv~~HG~~~-~~~~~~---~-~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G---~G~S~~~~~~~~~~~~~ 164 (388)
++..+|+|||.|- ...+|. + .+.+....+.=+ +.+.. ..||.|+..+.-- +-++...+......-++
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPy----i~rAv-~~Gygviv~N~N~~~kfye~k~np~kyirt~ve 174 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPY----IKRAV-AEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVE 174 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChH----HHHHH-HcCCcEEEeCCchhhhhhhcccCcchhccchHH
Confidence 3568999999883 333443 0 011100000000 23333 3499999887531 11121222111222233
Q ss_pred HHHHHHH----HhCCCCcEEEEEecccHHHHHHHHHhCCc--ccceeEeeccc
Q 016533 165 DIEELAD----QLGVGSKFYVIGYSMGGHPIWGCLKYIPH--RLAGAGLLAPV 211 (388)
Q Consensus 165 dl~~~l~----~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~ 211 (388)
....+-+ -... +.+.++.||+||...+.+..++|+ +|.++.+.+.+
T Consensus 175 h~~yvw~~~v~pa~~-~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 175 HAKYVWKNIVLPAKA-ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHHHHHhcccCc-ceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 3333222 2344 789999999999999999999874 67777777765
No 196
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.83 E-value=0.0026 Score=50.13 Aligned_cols=51 Identities=24% Similarity=0.038 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHhC---CCCcEEEEEecccHHHHHHHHHhCCc----ccceeEeeccc
Q 016533 161 SDALDIEELADQLG---VGSKFYVIGYSMGGHPIWGCLKYIPH----RLAGAGLLAPV 211 (388)
Q Consensus 161 ~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lil~~~~ 211 (388)
...+.+...++... ...+++++|||+||.+|..++..... .+..++..+++
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 34444555554431 23799999999999999999887654 56667777765
No 197
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.59 E-value=0.0042 Score=48.09 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhC
Q 016533 161 SDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 161 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
+..+.+.++++.... .++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPD-YSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHhh
Confidence 445556665555554 6999999999999999888763
No 198
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.42 E-value=0.015 Score=53.41 Aligned_cols=121 Identities=21% Similarity=0.183 Sum_probs=71.2
Q ss_pred CCCceEEEEccCCCCCccccccccCCCCCccccccCch---HHHHHHhCeEEEEeC-CCCcCCCCC-CC--CCChhhHHH
Q 016533 92 NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIY---QEVIEDLGVYIVSYD-RAGYGESDP-NP--NRTVKSDAL 164 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~g~~vi~~D-~~G~G~S~~-~~--~~~~~~~~~ 164 (388)
.++|.++.+.|.+|++..+.+.-.+.|..-.--...+. +.-..+ .-.++-+| .-|.|.|.. .. ..+.+...+
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCcccccccccccchhccch
Confidence 35899999999999999887321222210000000000 111111 13799999 559999874 11 235555566
Q ss_pred HHHHHHHHh--------CCCCcEEEEEecccHHHHHHHHHhCCc---ccceeEeeccccc
Q 016533 165 DIEELADQL--------GVGSKFYVIGYSMGGHPIWGCLKYIPH---RLAGAGLLAPVVN 213 (388)
Q Consensus 165 dl~~~l~~l--------~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lil~~~~~~ 213 (388)
|+..+.+.+ ++..+.+|+|-|+||.-+-.+|..--+ ..++++.+.+...
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 655555433 222589999999999998888865333 3566666665543
No 199
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.25 E-value=0.029 Score=43.67 Aligned_cols=116 Identities=15% Similarity=0.120 Sum_probs=68.0
Q ss_pred CcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHh--C-eEEEEeCCCCcCC-CCC
Q 016533 78 GRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDL--G-VYIVSYDRAGYGE-SDP 153 (388)
Q Consensus 78 g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g-~~vi~~D~~G~G~-S~~ 153 (388)
++.+.+..+|-. +.+||+++-.++....|. .+ +++..++... | ...+++| |... |--
T Consensus 14 ~RdMel~ryGHa----G~pVvvFpts~Grf~eye---d~----------G~v~ala~fie~G~vQlft~~--gldsESf~ 74 (227)
T COG4947 14 NRDMELNRYGHA----GIPVVVFPTSGGRFNEYE---DF----------GMVDALASFIEEGLVQLFTLS--GLDSESFL 74 (227)
T ss_pred cchhhhhhccCC----CCcEEEEecCCCcchhhh---hc----------ccHHHHHHHHhcCcEEEEEec--ccchHhHh
Confidence 556777777753 556666676666666665 43 1134443321 4 3344443 3221 111
Q ss_pred CCCCChhhHHH----HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 154 NPNRTVKSDAL----DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 154 ~~~~~~~~~~~----dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
.......+.++ --.-+++..-+ ...++-|.||||..|..+.-++|+...++|.+++..+
T Consensus 75 a~h~~~adr~~rH~AyerYv~eEalp-gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 75 ATHKNAADRAERHRAYERYVIEEALP-GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred hhcCCHHHHHHHHHHHHHHHHHhhcC-CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 11112222222 22234444434 4678899999999999999999999999999998753
No 200
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.14 E-value=0.013 Score=49.20 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=33.7
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhC----CcccceeEeeccc
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYI----PHRLAGAGLLAPV 211 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lil~~~~ 211 (388)
-+..+++..+ .++.+.|||.||.+|...+... .++|.++...+++
T Consensus 74 yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 74 YLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 3444444443 4699999999999999999874 3578888888864
No 201
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.14 E-value=0.029 Score=50.00 Aligned_cols=65 Identities=29% Similarity=0.409 Sum_probs=49.3
Q ss_pred HHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh----CCCCcEEEEEecccHHHHHHHHHhCC
Q 016533 130 QEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL----GVGSKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 130 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
...+++.|+.|+-+|-.-|=.|+ .+.++.++|+..++++. +. +++.|+|+|+|+-+.-..-.+-|
T Consensus 280 ~~~l~~~gvpVvGvdsLRYfW~~----rtPe~~a~Dl~r~i~~y~~~w~~-~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 280 AEALQKQGVPVVGVDSLRYFWSE----RTPEQIAADLSRLIRFYARRWGA-KRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHCCCceeeeehhhhhhcc----CCHHHHHHHHHHHHHHHHHhhCc-ceEEEEeecccchhhHHHHHhCC
Confidence 45556669999999976554443 47889999999998876 44 79999999999988765555544
No 202
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.06 E-value=0.012 Score=48.12 Aligned_cols=41 Identities=17% Similarity=0.150 Sum_probs=33.8
Q ss_pred ChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhC
Q 016533 158 TVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 158 ~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
...|..+....+|++.+.+++++|+|||.|+.+..++...+
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 45566666777888887778999999999999999998874
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.96 E-value=0.032 Score=45.11 Aligned_cols=103 Identities=16% Similarity=0.208 Sum_probs=55.4
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhC---eEEEEeCCCCcCCCCCCCCC--ChhhHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLG---VYIVSYDRAGYGESDPNPNR--TVKSDALDIEE 168 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g---~~vi~~D~~G~G~S~~~~~~--~~~~~~~dl~~ 168 (388)
.-.||+..|.+.......+.+.+ ...+.+..| ..+..+++|-..... .| +..+=++++..
T Consensus 5 ~v~vi~aRGT~E~~g~~~~g~~~------------~~~l~~~~g~~~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~ 69 (179)
T PF01083_consen 5 DVHVIFARGTGEPPGVGRVGPPF------------ADALQAQPGGTSVAVQGVEYPASLGPN---SYGDSVAAGVANLVR 69 (179)
T ss_dssp SEEEEEE--TTSSTTTCCCHHHH------------HHHHHHHCTTCEEEEEE--S---SCGG---SCHHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCCCCCccccHHH------------HHHHHhhcCCCeeEEEecCCCCCCCcc---cccccHHHHHHHHHH
Confidence 34577777777654432211122 233333334 455556665322111 12 33333445555
Q ss_pred HHHHh---CCCCcEEEEEecccHHHHHHHHHh------CCcccceeEeeccc
Q 016533 169 LADQL---GVGSKFYVIGYSMGGHPIWGCLKY------IPHRLAGAGLLAPV 211 (388)
Q Consensus 169 ~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~------~p~~v~~lil~~~~ 211 (388)
.++.. ..+.+++|+|+|.|+.++..++.. ..++|.++++++-+
T Consensus 70 ~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 70 LIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred HHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 55432 445799999999999999999877 23679999999854
No 204
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.96 E-value=0.015 Score=52.16 Aligned_cols=103 Identities=16% Similarity=0.250 Sum_probs=78.9
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCC----CChhhHHHHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPN----RTVKSDALDIEE 168 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~dl~~ 168 (388)
.+|+|+..-|.+.+..... .- ...+++ -+-+.+++|-+|.|.+.+. .++++-+.|.+.
T Consensus 62 drPtV~~T~GY~~~~~p~r---~E------------pt~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hr 123 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRR---SE------------PTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHR 123 (448)
T ss_pred CCCeEEEecCcccccCccc---cc------------hhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHH
Confidence 3789999999887654333 11 144444 4789999999999986552 388899999998
Q ss_pred HHHHhCC--CCcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 169 LADQLGV--GSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 169 ~l~~l~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
+++.+.. ..+.+--|-|-||+.++.+=..||+.|++.|.-....+
T Consensus 124 i~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 124 IVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred HHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 8877732 36899999999999999998999999999887665543
No 205
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.95 E-value=0.014 Score=49.31 Aligned_cols=36 Identities=28% Similarity=0.441 Sum_probs=33.9
Q ss_pred CcEEEEEecccHHHHHHHHHhCCcccceeEeecccc
Q 016533 177 SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 177 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 212 (388)
++..++|||+||.+++.....+|+.+...++++|..
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 579999999999999999999999999999999974
No 206
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.73 E-value=0.015 Score=54.82 Aligned_cols=53 Identities=13% Similarity=0.154 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHHhC---------------CcccceeEeecccc
Q 016533 160 KSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLKYI---------------PHRLAGAGLLAPVV 212 (388)
Q Consensus 160 ~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~---------------p~~v~~lil~~~~~ 212 (388)
+++-..+..+|+.. +-++|++|+||||||.+++.+...- .+.|++.|.+++..
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 44545555555543 3237999999999999999987632 13589999999764
No 207
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.53 E-value=0.019 Score=48.64 Aligned_cols=35 Identities=20% Similarity=0.072 Sum_probs=25.4
Q ss_pred CcEEEEEecccHHHHHHHHHhC-----CcccceeEeeccc
Q 016533 177 SKFYVIGYSMGGHPIWGCLKYI-----PHRLAGAGLLAPV 211 (388)
Q Consensus 177 ~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~~~ 211 (388)
.++++.|||+||.+|..++... +..+..+.+-+|.
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 6899999999999999888753 2345555544443
No 208
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.47 E-value=0.39 Score=49.12 Aligned_cols=95 Identities=18% Similarity=0.234 Sum_probs=68.2
Q ss_pred CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCC--CCCCCCCChhhHHHHHHHH
Q 016533 92 NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGE--SDPNPNRTVKSDALDIEEL 169 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~--S~~~~~~~~~~~~~dl~~~ 169 (388)
...|++.|+|.+-+....+. .++.+. ..|-||. ++..+..++++.++-...-
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~-------------------~la~rl-------e~PaYglQ~T~~vP~dSies~A~~yirq 2174 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALE-------------------SLASRL-------EIPAYGLQCTEAVPLDSIESLAAYYIRQ 2174 (2376)
T ss_pred ccCCceEEEeccccchHHHH-------------------HHHhhc-------CCcchhhhccccCCcchHHHHHHHHHHH
Confidence 34789999999888776544 445442 2333442 3344456888888887777
Q ss_pred HHHhCCCCcEEEEEecccHHHHHHHHHhC--CcccceeEeecccc
Q 016533 170 ADQLGVGSKFYVIGYSMGGHPIWGCLKYI--PHRLAGAGLLAPVV 212 (388)
Q Consensus 170 l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lil~~~~~ 212 (388)
++++....+..++|+|+|+.++..+|..- .+....+|++++..
T Consensus 2175 irkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2175 IRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred HHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 88887767999999999999999998653 23456699998764
No 209
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.12 E-value=0.17 Score=42.51 Aligned_cols=73 Identities=16% Similarity=0.133 Sum_probs=45.8
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHH----HHHHHHh----CC---CCcEEEEEecccHHHHHHHHHh
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDI----EELADQL----GV---GSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl----~~~l~~l----~~---~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
...+.++ ||.|++.-+. ...+-...++++ +..++.+ +. .-+++-+|||+|+-+-+.+...
T Consensus 40 Le~La~~-Gy~ViAtPy~--------~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~ 110 (250)
T PF07082_consen 40 LERLADR-GYAVIATPYV--------VTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSL 110 (250)
T ss_pred HHHHHhC-CcEEEEEecC--------CCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhh
Confidence 5666655 9999998773 122222222222 2222222 22 1367899999999999988888
Q ss_pred CCcccceeEeecc
Q 016533 198 IPHRLAGAGLLAP 210 (388)
Q Consensus 198 ~p~~v~~lil~~~ 210 (388)
++..-++-++++-
T Consensus 111 ~~~~r~gniliSF 123 (250)
T PF07082_consen 111 FDVERAGNILISF 123 (250)
T ss_pred ccCcccceEEEec
Confidence 7766677788773
No 210
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.93 E-value=0.12 Score=50.22 Aligned_cols=106 Identities=15% Similarity=0.082 Sum_probs=63.9
Q ss_pred CceEEEEccCCCCCcc---ccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC----Cc---CCCCCCCCCChhhHH
Q 016533 94 KYKIFFVHGFDSCRHD---SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA----GY---GESDPNPNRTVKSDA 163 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~---G~S~~~~~~~~~~~~ 163 (388)
-|++|++||.+-.... +. ... ...++...+.-|+.+.+| |+ |.+..+.++.+.|+.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~---~~~-----------~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~ 177 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFE---IIS-----------PAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQL 177 (545)
T ss_pred CCEEEEEeCCceeeccccchh---hcC-----------chhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHH
Confidence 5899999998732222 21 110 234444435677888877 32 323333455666665
Q ss_pred HHHH---HHHHHhC-CCCcEEEEEecccHHHHHHHHHh--CCcccceeEeeccccc
Q 016533 164 LDIE---ELADQLG-VGSKFYVIGYSMGGHPIWGCLKY--IPHRLAGAGLLAPVVN 213 (388)
Q Consensus 164 ~dl~---~~l~~l~-~~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lil~~~~~~ 213 (388)
..+. +-|...| -.++|.|+|||.||..+..+... ....+.++|.+++...
T Consensus 178 ~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 178 LALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 5444 4444443 23799999999999998776654 1245777777776643
No 211
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.87 E-value=0.033 Score=50.84 Aligned_cols=49 Identities=22% Similarity=0.187 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCc--------ccceeEeeccc
Q 016533 162 DALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPH--------RLAGAGLLAPV 211 (388)
Q Consensus 162 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lil~~~~ 211 (388)
+..-|+...+.-|- +|++|++||||+.+.+.+...+++ .|++++-+++.
T Consensus 168 LK~~iE~~~~~~G~-kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 168 LKKKIETMYKLNGG-KKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHHHHHHHHcCC-CceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 33333333344454 799999999999999999998876 37777777754
No 212
>PLN02162 triacylglycerol lipase
Probab=94.84 E-value=0.068 Score=49.13 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH
Q 016533 162 DALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLK 196 (388)
Q Consensus 162 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~ 196 (388)
..+.+.+++++... .++++.|||+||.+|..+|.
T Consensus 264 I~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNKN-LKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHH
Confidence 34445555555443 68999999999999988764
No 213
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.77 E-value=0.58 Score=36.24 Aligned_cols=78 Identities=18% Similarity=0.193 Sum_probs=51.5
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeE-EEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVY-IVSYDRAGYGESDPNPNRTVKSDALDIEELADQ 172 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~ 172 (388)
...||+.-|++..+..+. .+ ....++. ++++|++.... +.++.
T Consensus 11 d~LIvyFaGwgtpps~v~---HL----------------ilpeN~dl~lcYDY~dl~l-----dfDfs------------ 54 (214)
T COG2830 11 DHLIVYFAGWGTPPSAVN---HL----------------ILPENHDLLLCYDYQDLNL-----DFDFS------------ 54 (214)
T ss_pred CEEEEEEecCCCCHHHHh---hc----------------cCCCCCcEEEEeehhhcCc-----ccchh------------
Confidence 347888899998887665 33 2222454 57888863321 11111
Q ss_pred hCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 173 LGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 173 l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
.. +.+.+|.+|||-.+|-++.... ++++.+.+++.
T Consensus 55 -Ay-~hirlvAwSMGVwvAeR~lqg~--~lksatAiNGT 89 (214)
T COG2830 55 -AY-RHIRLVAWSMGVWVAERVLQGI--RLKSATAINGT 89 (214)
T ss_pred -hh-hhhhhhhhhHHHHHHHHHHhhc--cccceeeecCC
Confidence 12 5788999999999999888875 46777777765
No 214
>PLN00413 triacylglycerol lipase
Probab=94.75 E-value=0.075 Score=48.97 Aligned_cols=35 Identities=29% Similarity=0.262 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH
Q 016533 161 SDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLK 196 (388)
Q Consensus 161 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~ 196 (388)
+..+.+.++++.... .++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~-~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPT-SKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCC-CeEEEEecCHHHHHHHHHHH
Confidence 455667777766554 68999999999999998874
No 215
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.70 E-value=0.79 Score=41.01 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=45.5
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhC----CCceEEEeCCCCCCcccC--CCchHHHHHHhhcC
Q 016533 331 VHLWHGDEDRLVPVILQRYIVQRL----PWIHYHELSGAGHMFPFT--DGMSDTIVKAVLTG 386 (388)
Q Consensus 331 vlii~G~~D~~~p~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~~ 386 (388)
.+.+++..|.++|....+++.+.. -+++-+.+.++-|..++. |..+.+...+|+++
T Consensus 228 ~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 228 QLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred ceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHh
Confidence 788999999999999887775443 245566677889999887 99999999999975
No 216
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=94.67 E-value=0.038 Score=40.60 Aligned_cols=38 Identities=11% Similarity=0.161 Sum_probs=23.3
Q ss_pred EEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCcccc
Q 016533 73 IKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSA 111 (388)
Q Consensus 73 ~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~ 111 (388)
.+..+|..||+....+. .....+|||+||++++...|.
T Consensus 72 ~t~I~g~~iHFih~rs~-~~~aiPLll~HGWPgSf~Ef~ 109 (112)
T PF06441_consen 72 KTEIDGLDIHFIHVRSK-RPNAIPLLLLHGWPGSFLEFL 109 (112)
T ss_dssp EEEETTEEEEEEEE--S--TT-EEEEEE--SS--GGGGH
T ss_pred eEEEeeEEEEEEEeeCC-CCCCeEEEEECCCCccHHhHH
Confidence 33348999999877643 345779999999999988765
No 217
>PLN02571 triacylglycerol lipase
Probab=94.59 E-value=0.048 Score=49.63 Aligned_cols=38 Identities=11% Similarity=-0.005 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHHhCC-CCcEEEEEecccHHHHHHHHHh
Q 016533 160 KSDALDIEELADQLGV-GSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 160 ~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
+++.++|..+++.... +-++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4455667777766543 1268999999999999988865
No 218
>PLN02454 triacylglycerol lipase
Probab=94.41 E-value=0.059 Score=49.01 Aligned_cols=20 Identities=15% Similarity=-0.002 Sum_probs=17.9
Q ss_pred cEEEEEecccHHHHHHHHHh
Q 016533 178 KFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 178 ~~~lvGhS~Gg~ia~~~a~~ 197 (388)
++++.|||+||.+|+..|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 49999999999999998854
No 219
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.03 E-value=0.19 Score=47.04 Aligned_cols=117 Identities=21% Similarity=0.187 Sum_probs=64.1
Q ss_pred EEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhh
Q 016533 82 AYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKS 161 (388)
Q Consensus 82 ~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 161 (388)
.|+.|-.|...++-.|+-+||.|--...-. ...++ .....+..|+-|+.+|+-=--+..- ..-.++
T Consensus 384 ~~~~wh~P~p~S~sli~HcHGGGfVAqsSk---SHE~Y---------Lr~Wa~aL~cPiiSVdYSLAPEaPF--PRaleE 449 (880)
T KOG4388|consen 384 SLELWHRPAPRSRSLIVHCHGGGFVAQSSK---SHEPY---------LRSWAQALGCPIISVDYSLAPEAPF--PRALEE 449 (880)
T ss_pred ccccCCCCCCCCceEEEEecCCceeeeccc---cccHH---------HHHHHHHhCCCeEEeeeccCCCCCC--CcHHHH
Confidence 355554443345667889999985444333 22111 3677777899999999832221111 112222
Q ss_pred HHHHHHHHH---HHhCC-CCcEEEEEecccHHHHHHHHHh---CCcc-cceeEeecccc
Q 016533 162 DALDIEELA---DQLGV-GSKFYVIGYSMGGHPIWGCLKY---IPHR-LAGAGLLAPVV 212 (388)
Q Consensus 162 ~~~dl~~~l---~~l~~-~~~~~lvGhS~Gg~ia~~~a~~---~p~~-v~~lil~~~~~ 212 (388)
.--...=+| ..+|. +++|+++|-|.||.+.+..+.+ +.-| -+|+++.-+..
T Consensus 450 v~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 450 VFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred HHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 211111111 22343 3899999999999876655543 1222 36777766543
No 220
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=93.85 E-value=0.093 Score=42.14 Aligned_cols=58 Identities=14% Similarity=0.086 Sum_probs=44.6
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHhC---CC--ceEEEeCCCCCCcccC----CCchHHHHHHhhcC
Q 016533 329 GSVHLWHGDEDRLVPVILQRYIVQRL---PW--IHYHELSGAGHMFPFT----DGMSDTIVKAVLTG 386 (388)
Q Consensus 329 ~Pvlii~G~~D~~~p~~~~~~~~~~~---~~--~~~~~i~~~gH~~~~e----~~~~~~~i~~fl~~ 386 (388)
+++|-|-|+.|.++.+...+...+.+ |. ...++.+|+||+..+. .+++.-.|.+|+.+
T Consensus 135 taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 135 TALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 34778999999999987766655554 42 3467889999998886 56788889999865
No 221
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.80 E-value=0.067 Score=47.93 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=47.6
Q ss_pred CCceEEEEccCCC-CCccccccccCCCCCccccccCchHHHHHHh-CeEEEEeCCCCc-CCCCCCCCCChhhHHHHHHHH
Q 016533 93 AKYKIFFVHGFDS-CRHDSAVANFLSPFMPILWCGGIYQEVIEDL-GVYIVSYDRAGY-GESDPNPNRTVKSDALDIEEL 169 (388)
Q Consensus 93 ~~~~vv~~HG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~-G~S~~~~~~~~~~~~~dl~~~ 169 (388)
++-.||+.||+-+ +...|. .. +....... +..++.-+..|. ..+......--+..++++.+.
T Consensus 79 ~~HLvVlthGi~~~~~~~~~---~~------------~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~ 143 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWK---EK------------IEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKET 143 (405)
T ss_pred CceEEEeccccccccHHHHH---HH------------HHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhh
Confidence 3568999999988 444444 22 22222221 232333333221 111111122234556666666
Q ss_pred HHHhCCCCcEEEEEecccHHHHHHHH
Q 016533 170 ADQLGVGSKFYVIGYSMGGHPIWGCL 195 (388)
Q Consensus 170 l~~l~~~~~~~lvGhS~Gg~ia~~~a 195 (388)
+....+ +++.++|||+||.++-.+.
T Consensus 144 ~~~~si-~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 144 LYDYSI-EKISFVGHSLGGLVARYAI 168 (405)
T ss_pred hhcccc-ceeeeeeeecCCeeeeEEE
Confidence 666667 7999999999998875433
No 222
>PLN02310 triacylglycerol lipase
Probab=93.73 E-value=0.092 Score=47.69 Aligned_cols=37 Identities=16% Similarity=0.094 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHhC---CCCcEEEEEecccHHHHHHHHHh
Q 016533 161 SDALDIEELADQLG---VGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 161 ~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
+..+.|..+++... .+.++++.|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34456666666542 22479999999999999888754
No 223
>PLN02408 phospholipase A1
Probab=93.69 E-value=0.099 Score=46.90 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhCC-CCcEEEEEecccHHHHHHHHHh
Q 016533 163 ALDIEELADQLGV-GSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 163 ~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
.++|..+++.... ..++++.|||+||.+|...|..
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 4455666655443 1369999999999999988865
No 224
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.23 E-value=1.3 Score=41.94 Aligned_cols=78 Identities=21% Similarity=0.216 Sum_probs=54.9
Q ss_pred HhCeEEEEeCCCCcCCCCC----CCCCCh-----------hhHHHHHHHHHHHh---CCCCcEEEEEecccHHHHHHHHH
Q 016533 135 DLGVYIVSYDRAGYGESDP----NPNRTV-----------KSDALDIEELADQL---GVGSKFYVIGYSMGGHPIWGCLK 196 (388)
Q Consensus 135 ~~g~~vi~~D~~G~G~S~~----~~~~~~-----------~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~ 196 (388)
..||.++.-|- ||..+.. ....+. .+.+.--.++++.. .. +.-+..|.|-||.-++..|+
T Consensus 57 ~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p-~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 57 ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAP-KYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCC-CceEEEEeCCCcchHHHHHH
Confidence 34999999987 7765532 111122 22222233344443 33 68899999999999999999
Q ss_pred hCCcccceeEeecccccc
Q 016533 197 YIPHRLAGAGLLAPVVNY 214 (388)
Q Consensus 197 ~~p~~v~~lil~~~~~~~ 214 (388)
+||+..+||+.-+|..++
T Consensus 135 ryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 135 RYPEDFDGILAGAPAINW 152 (474)
T ss_pred hChhhcCeEEeCCchHHH
Confidence 999999999999998763
No 225
>PLN02934 triacylglycerol lipase
Probab=93.20 E-value=0.13 Score=47.75 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH
Q 016533 161 SDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLK 196 (388)
Q Consensus 161 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~ 196 (388)
+..+.+.++++.... .++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p~-~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKN-AKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCC-CeEEEeccccHHHHHHHHHH
Confidence 345556666665544 69999999999999998874
No 226
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=92.91 E-value=0.28 Score=43.85 Aligned_cols=36 Identities=22% Similarity=0.389 Sum_probs=29.2
Q ss_pred CcEEEEEecccHHHHHHHHHhCCc-----ccceeEeecccc
Q 016533 177 SKFYVIGYSMGGHPIWGCLKYIPH-----RLAGAGLLAPVV 212 (388)
Q Consensus 177 ~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lil~~~~~ 212 (388)
+++.|||||+|+.+.......-.+ .|+.+++++.+.
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 689999999999998877665433 389999999764
No 227
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.76 E-value=0.15 Score=47.58 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHhC---CCCcEEEEEecccHHHHHHHHHh
Q 016533 161 SDALDIEELADQLG---VGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 161 ~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
+..++|..+++... .+.++++.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34456777776553 22479999999999999888754
No 228
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=92.73 E-value=1.3 Score=38.58 Aligned_cols=137 Identities=17% Similarity=0.115 Sum_probs=82.1
Q ss_pred eEEcCCCcEEEEEEcCCCCC--CCCceEEEEccCCCCCcc-ccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC-C
Q 016533 72 RIKLRDGRHLAYKEHGVPKD--NAKYKIFFVHGFDSCRHD-SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA-G 147 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~~~--~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~-G 147 (388)
++...++..+.|+.+-.... ..+|..+.+.|.++.+.. |.=++.+.|.--.+=++ -...++. ..++.+|-| |
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r--~~TWlk~--adllfvDnPVG 82 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPR--DWTWLKD--ADLLFVDNPVG 82 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcC--Cchhhhh--ccEEEecCCCc
Confidence 55666777777665532211 236778888888765432 22001333310000000 0122333 467888877 7
Q ss_pred cCCCC--CCCCC--ChhhHHHHHHHHHHHh---CC---CCcEEEEEecccHHHHHHHHHhCCc---------ccceeEee
Q 016533 148 YGESD--PNPNR--TVKSDALDIEELADQL---GV---GSKFYVIGYSMGGHPIWGCLKYIPH---------RLAGAGLL 208 (388)
Q Consensus 148 ~G~S~--~~~~~--~~~~~~~dl~~~l~~l---~~---~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lil~ 208 (388)
.|.|- ....| +.++.+.|+.++++.+ +. ..+++|+..|+||-++..++....+ .+.+++|=
T Consensus 83 aGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLG 162 (414)
T KOG1283|consen 83 AGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALG 162 (414)
T ss_pred CceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEcc
Confidence 78774 32223 6788999999999876 11 2689999999999999888765322 35567776
Q ss_pred cccc
Q 016533 209 APVV 212 (388)
Q Consensus 209 ~~~~ 212 (388)
++.+
T Consensus 163 DSWI 166 (414)
T KOG1283|consen 163 DSWI 166 (414)
T ss_pred Cccc
Confidence 6654
No 229
>PLN02324 triacylglycerol lipase
Probab=92.66 E-value=0.16 Score=46.22 Aligned_cols=36 Identities=11% Similarity=-0.041 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCC-CCcEEEEEecccHHHHHHHHHh
Q 016533 162 DALDIEELADQLGV-GSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 162 ~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
+.++|..+++...- +.+|++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34456666665432 1369999999999999988854
No 230
>PLN02802 triacylglycerol lipase
Probab=92.52 E-value=0.18 Score=46.94 Aligned_cols=36 Identities=14% Similarity=0.055 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCC-CCcEEEEEecccHHHHHHHHHh
Q 016533 162 DALDIEELADQLGV-GSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 162 ~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
..++|..+++...- +.+|++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34455555554432 1379999999999999987765
No 231
>PLN02753 triacylglycerol lipase
Probab=92.29 E-value=0.19 Score=46.96 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCC----CCcEEEEEecccHHHHHHHHHh
Q 016533 162 DALDIEELADQLGV----GSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 162 ~~~dl~~~l~~l~~----~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
..+.|..+++.... +-+|++.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455566655421 2589999999999999988853
No 232
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=92.15 E-value=0.24 Score=43.83 Aligned_cols=47 Identities=9% Similarity=-0.055 Sum_probs=39.3
Q ss_pred CCCccEEEEecCCCCCCcHHHHHHHHHhCCCce-EEEeCCCCCCcccC
Q 016533 326 NNEGSVHLWHGDEDRLVPVILQRYIVQRLPWIH-YHELSGAGHMFPFT 372 (388)
Q Consensus 326 ~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~-~~~i~~~gH~~~~e 372 (388)
++..|-.++.+..|.+.++..+..+++.+|+.+ +..+|+..|.....
T Consensus 327 RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~ 374 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ 374 (507)
T ss_pred hccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH
Confidence 345558999999999999999999999999765 88899999976653
No 233
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.12 E-value=10 Score=35.44 Aligned_cols=119 Identities=16% Similarity=0.071 Sum_probs=72.3
Q ss_pred EEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeE-EEEeCCCCcCCC
Q 016533 73 IKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVY-IVSYDRAGYGES 151 (388)
Q Consensus 73 ~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~G~G~S 151 (388)
+..+.+..+.|+... + +-..|..|...|+-. .+-|. .-.+.++.|.- .+.-|.|=-|.+
T Consensus 270 ~~D~~reEi~yYFnP-G-D~KPPL~VYFSGyR~-aEGFE-----------------gy~MMk~Lg~PfLL~~DpRleGGa 329 (511)
T TIGR03712 270 LVDSKRQEFIYYFNP-G-DFKPPLNVYFSGYRP-AEGFE-----------------GYFMMKRLGAPFLLIGDPRLEGGA 329 (511)
T ss_pred EecCCCCeeEEecCC-c-CCCCCeEEeeccCcc-cCcch-----------------hHHHHHhcCCCeEEeeccccccce
Confidence 333445566665442 2 123566788888776 55554 23444555654 444566655554
Q ss_pred CCCCCCC-hhhHHHHHHHHHHHhCCC-CcEEEEEecccHHHHHHHHHhCCcccceeEeeccccc
Q 016533 152 DPNPNRT-VKSDALDIEELADQLGVG-SKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPVVN 213 (388)
Q Consensus 152 ~~~~~~~-~~~~~~dl~~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~ 213 (388)
--..... -+.+.+-|.+.++.||.+ +.++|-|-|||..-|+.+++... -.++|+--|.++
T Consensus 330 FYlGs~eyE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 330 FYLGSDEYEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred eeeCcHHHHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 3111112 334555677788888873 57999999999999999998753 345666556543
No 234
>PLN02761 lipase class 3 family protein
Probab=91.89 E-value=0.23 Score=46.41 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhC-----CCCcEEEEEecccHHHHHHHHHh
Q 016533 162 DALDIEELADQLG-----VGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 162 ~~~dl~~~l~~l~-----~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
+.+.|..+++... .+-++++.|||+||.+|...|..
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 4455566665541 22479999999999999988753
No 235
>PLN02719 triacylglycerol lipase
Probab=91.15 E-value=0.3 Score=45.62 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhC----CCCcEEEEEecccHHHHHHHHHh
Q 016533 162 DALDIEELADQLG----VGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 162 ~~~dl~~~l~~l~----~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
..+.|..+++... ...++++.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3344555555432 12479999999999999988754
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.82 E-value=1.3 Score=37.31 Aligned_cols=61 Identities=21% Similarity=0.367 Sum_probs=38.2
Q ss_pred CeEEEEeCCCCc-----CCCCCCCCCChhhHHHHHHHHHHH-hCCCCcEEEEEecccHHHHHHHHHh
Q 016533 137 GVYIVSYDRAGY-----GESDPNPNRTVKSDALDIEELADQ-LGVGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 137 g~~vi~~D~~G~-----G~S~~~~~~~~~~~~~dl~~~l~~-l~~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
|+.+..+++|.. |.....-+.+..+=++.+.+.++. ...+++++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 566777777751 111111223555555566666654 2244799999999999999887765
No 237
>PLN02847 triacylglycerol lipase
Probab=89.57 E-value=0.55 Score=44.71 Aligned_cols=21 Identities=24% Similarity=0.199 Sum_probs=18.5
Q ss_pred CcEEEEEecccHHHHHHHHHh
Q 016533 177 SKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 177 ~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 589999999999999887764
No 238
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=88.59 E-value=0.61 Score=41.96 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh
Q 016533 160 KSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 160 ~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
..+.+++..+++...- -++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~-~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN-YSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEecCChHHHHHHHHHHH
Confidence 4556667777776664 799999999999999887764
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=86.45 E-value=1.5 Score=41.57 Aligned_cols=61 Identities=20% Similarity=0.165 Sum_probs=47.0
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhC----C--------CceEEEeCCCCCCcccC---CCchHHHHHHhhcCC
Q 016533 327 NEGSVHLWHGDEDRLVPVILQRYIVQRL----P--------WIHYHELSGAGHMFPFT---DGMSDTIVKAVLTGD 387 (388)
Q Consensus 327 i~~Pvlii~G~~D~~~p~~~~~~~~~~~----~--------~~~~~~i~~~gH~~~~e---~~~~~~~i~~fl~~~ 387 (388)
-..++++.||..|.++|+..+..+++++ . -.++..+||.+|+.--. +-.....|.+|+++.
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 3456999999999999998877666654 2 13688999999998765 445778888898764
No 240
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.71 E-value=1.7 Score=41.32 Aligned_cols=53 Identities=25% Similarity=0.223 Sum_probs=33.5
Q ss_pred hhhHHHHHHHHHHHhCC--CCcEEEEEecccHHHHHHHHHh-----CCc------ccceeEeeccc
Q 016533 159 VKSDALDIEELADQLGV--GSKFYVIGYSMGGHPIWGCLKY-----IPH------RLAGAGLLAPV 211 (388)
Q Consensus 159 ~~~~~~dl~~~l~~l~~--~~~~~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lil~~~~ 211 (388)
+..-.+.+.+.+.+.++ +.+++.+||||||.++=.+... .|+ ...|+|+++.+
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 33344445555555444 4799999999999887665543 232 46677777753
No 241
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=83.64 E-value=2.5 Score=36.27 Aligned_cols=45 Identities=18% Similarity=0.142 Sum_probs=30.9
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
||...+..+-.+.++.+-|||+||.+|..+..++. +-.+.+-+|.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 34444444545579999999999999998888874 3345555543
No 242
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=83.64 E-value=2.5 Score=36.27 Aligned_cols=45 Identities=18% Similarity=0.142 Sum_probs=30.9
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
||...+..+-.+.++.+-|||+||.+|..+..++. +-.+.+-+|.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 34444444545579999999999999998888874 3345555543
No 243
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=81.48 E-value=27 Score=28.33 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=55.4
Q ss_pred CeEEcCCCcEEEEEEcCCCCCCCCceE-EEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEE------EEe
Q 016533 71 PRIKLRDGRHLAYKEHGVPKDNAKYKI-FFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYI------VSY 143 (388)
Q Consensus 71 ~~~~~~~g~~l~y~~~g~~~~~~~~~v-v~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~v------i~~ 143 (388)
.++.. +|..+.|..+...+-.++..| -++-|++.....-. ++ +..+.++ |+.+ +.+
T Consensus 38 ge~~~-~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~---P~------------l~~l~~~-~~~~~~y~~t~~I 100 (184)
T TIGR01626 38 GEIVL-SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNA---SL------------IDAIKAA-KFPPVKYQTTTII 100 (184)
T ss_pred ceEEE-cCCcccceeccHHHcCCCEEEEEEEecCCChhhccc---hH------------HHHHHHc-CCCcccccceEEE
Confidence 36666 556799999965543334333 35557777777666 66 5666444 7776 666
Q ss_pred CCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHH
Q 016533 144 DRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCL 195 (388)
Q Consensus 144 D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a 195 (388)
+.- .........+..+++..+.+-++..+..+-.|.++..+.
T Consensus 101 N~d----------d~~~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~g 142 (184)
T TIGR01626 101 NAD----------DAIVGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAWQ 142 (184)
T ss_pred ECc----------cchhhHHHHHHHHHHHhcccCCcceEEECCcchHHHhcC
Confidence 531 123334445667777766533444444444555554443
No 244
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=67.84 E-value=29 Score=30.36 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=27.7
Q ss_pred ChhhHHHHHH-HHHHHhCCCCcEEEEEecccHHHHHHHHHh
Q 016533 158 TVKSDALDIE-ELADQLGVGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 158 ~~~~~~~dl~-~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
.+++.+.+.. .+++....++++.++|.|-|+.+|-.++..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 3444444333 333555666799999999999999888865
No 245
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=67.49 E-value=29 Score=24.94 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=51.7
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCCCCC-CCCh-hhHHHHHHHHHHHhCCCCcEEEEEecccHH--HHHHHHHhCCcccce
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESDPNP-NRTV-KSDALDIEELADQLGVGSKFYVIGYSMGGH--PIWGCLKYIPHRLAG 204 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~-~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~--ia~~~a~~~p~~v~~ 204 (388)
+..++...||-.=.+.++.+|.+...- .... +.=...|..+++..-. .++++||-|--.= +-..+|.+||++|.+
T Consensus 16 l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~-~kfiLIGDsgq~DpeiY~~ia~~~P~~i~a 94 (100)
T PF09949_consen 16 LRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPE-RKFILIGDSGQHDPEIYAEIARRFPGRILA 94 (100)
T ss_pred HHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCC-CcEEEEeeCCCcCHHHHHHHHHHCCCCEEE
Confidence 467777767766666777665543211 1111 3445567778877766 7999999886553 445578889999998
Q ss_pred eEe
Q 016533 205 AGL 207 (388)
Q Consensus 205 lil 207 (388)
+.+
T Consensus 95 i~I 97 (100)
T PF09949_consen 95 IYI 97 (100)
T ss_pred EEE
Confidence 865
No 246
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=66.74 E-value=10 Score=35.65 Aligned_cols=38 Identities=24% Similarity=0.450 Sum_probs=29.7
Q ss_pred CCCCcEEEEEecccHHHHHHHHHhC-----CcccceeEeecccc
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCLKYI-----PHRLAGAGLLAPVV 212 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~~~~ 212 (388)
|. +|+.|||+|+|+.+.......- -..|..+++++++.
T Consensus 445 G~-RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 445 GN-RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred CC-CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 55 7999999999999988665421 24588999999764
No 247
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=66.31 E-value=23 Score=29.22 Aligned_cols=66 Identities=17% Similarity=0.284 Sum_probs=42.5
Q ss_pred CCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCe-EEEEeCCCCcCCCCCCCCCChhhHHHHHH
Q 016533 89 PKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGV-YIVSYDRAGYGESDPNPNRTVKSDALDIE 167 (388)
Q Consensus 89 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~dl~ 167 (388)
|.......|++.||....+.... .. +..++.+.|| .|+....-|+. .++++.
T Consensus 133 pl~k~e~~vlmgHGt~h~s~~~Y---ac------------Ld~~~~~~~f~~v~v~~ve~yP------------~~d~vi 185 (265)
T COG4822 133 PLNKDEILVLMGHGTDHHSNAAY---AC------------LDHVLDEYGFDNVFVAAVEGYP------------LVDTVI 185 (265)
T ss_pred CcCcCeEEEEEecCCCccHHHHH---HH------------HHHHHHhcCCCceEEEEecCCC------------cHHHHH
Confidence 33344668889999887776655 44 5788888788 56655554332 345666
Q ss_pred HHHHHhCCCCcEEEE
Q 016533 168 ELADQLGVGSKFYVI 182 (388)
Q Consensus 168 ~~l~~l~~~~~~~lv 182 (388)
+.++.-+. +++.|+
T Consensus 186 ~~l~~~~~-~~v~L~ 199 (265)
T COG4822 186 EYLRKNGI-KEVHLI 199 (265)
T ss_pred HHHHHcCC-ceEEEe
Confidence 66666677 566665
No 248
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=65.36 E-value=35 Score=32.12 Aligned_cols=124 Identities=15% Similarity=0.108 Sum_probs=63.0
Q ss_pred EEEEEcCC-CCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC----C---c-CCC
Q 016533 81 LAYKEHGV-PKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA----G---Y-GES 151 (388)
Q Consensus 81 l~y~~~g~-~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G---~-G~S 151 (388)
|+.-.|-+ ++..+..++|.|-|.|--+..-.+ .+ | . -..++...+.-|+.+++| | . |..
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SL--dv-------Y-d--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~ 188 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSL--DV-------Y-D--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHP 188 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcce--ee-------e-c--cceeeeeccEEEEEeeeeeccceEEecCCCC
Confidence 44445544 232345578888887732221110 11 0 0 133333333556666665 2 2 333
Q ss_pred CCCCCCChhhHH---HHHHHHHHHhCC-CCcEEEEEecccHHHH-HHHHHh-CCcccceeEeeccccccCC
Q 016533 152 DPNPNRTVKSDA---LDIEELADQLGV-GSKFYVIGYSMGGHPI-WGCLKY-IPHRLAGAGLLAPVVNYWW 216 (388)
Q Consensus 152 ~~~~~~~~~~~~---~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia-~~~a~~-~p~~v~~lil~~~~~~~~~ 216 (388)
+.+.+..+-|+. +.|.+-+...|- .+++.|+|.|.|+.-. +++.+- --..++..|+-++..+-.|
T Consensus 189 eaPGNmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~pW 259 (601)
T KOG4389|consen 189 EAPGNMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNNPW 259 (601)
T ss_pred CCCCccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCCCc
Confidence 333344444443 345555666643 2799999999998743 333221 1134777777776665433
No 249
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=56.85 E-value=8.1 Score=37.11 Aligned_cols=37 Identities=19% Similarity=0.141 Sum_probs=29.4
Q ss_pred cEEEEEecccHHHHHHHHHhC-CcccceeEeecccccc
Q 016533 178 KFYVIGYSMGGHPIWGCLKYI-PHRLAGAGLLAPVVNY 214 (388)
Q Consensus 178 ~~~lvGhS~Gg~ia~~~a~~~-p~~v~~lil~~~~~~~ 214 (388)
.++--+.|-||..++..|++. ...|++++...|.+..
T Consensus 286 ~VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNL 323 (690)
T ss_pred EEEEEeecCccHHHHhHhhcccCCceeeEEecCCccCC
Confidence 455668999999999999874 3469999999887764
No 250
>PRK12467 peptide synthase; Provisional
Probab=56.62 E-value=34 Score=42.13 Aligned_cols=98 Identities=14% Similarity=0.092 Sum_probs=65.3
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL 173 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 173 (388)
.+.|++.|...++...+. .+ ...+.. +..++.+..++.-. +.....++++.+....+.+...
T Consensus 3692 ~~~l~~~h~~~r~~~~~~---~l-------------~~~l~~-~~~~~~l~~~~~~~-d~~~~~~~~~~~~~y~~~~~~~ 3753 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYE---PL-------------AVILEG-DRHVLGLTCRHLLD-DGWQDTSLQAMAVQYADYILWQ 3753 (3956)
T ss_pred ccceeeechhhcchhhhH---HH-------------HHHhCC-CCcEEEEecccccc-ccCCccchHHHHHHHHHHHHHh
Confidence 356999999888877666 55 333332 45778777665422 2223346777777777777666
Q ss_pred CCCCcEEEEEecccHHHHHHHHHh---CCcccceeEeec
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCLKY---IPHRLAGAGLLA 209 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lil~~ 209 (388)
....+..+.|+|+||.++..++.. ..+.+.-+.++.
T Consensus 3754 ~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3754 QAKGPYGLLGWSLGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred ccCCCeeeeeeecchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 544689999999999999888764 345566555554
No 251
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=54.66 E-value=13 Score=32.66 Aligned_cols=30 Identities=23% Similarity=0.119 Sum_probs=23.8
Q ss_pred HHHHHHhCCCCcEEEEEecccHHHHHHHHHh
Q 016533 167 EELADQLGVGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 167 ~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
.++++..|+ ++-.++|||+|-..|+.++..
T Consensus 73 ~~~l~~~Gi-~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 73 ARLWRSWGV-RPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHcCC-cccEEEecCHHHHHHHHHhCC
Confidence 345567788 789999999999998877654
No 252
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=53.83 E-value=8.7 Score=34.33 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHh
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
+.++++..|+ ++-.++|||+|=..|+.++..
T Consensus 74 l~~~l~~~Gi-~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGI-KPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTH-CESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhccccc-ccceeeccchhhHHHHHHCCc
Confidence 3456677788 789999999999988876654
No 253
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=53.76 E-value=36 Score=30.78 Aligned_cols=51 Identities=25% Similarity=0.413 Sum_probs=36.1
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEE
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVI 182 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lv 182 (388)
.+.++++.||.|+.+-+.-+.. +.......++..+|...+.+++|+ +..++
T Consensus 19 aA~lLk~QGyeViGl~m~~~~~-~~~~~C~s~~d~~da~~va~~LGI--p~~~v 69 (356)
T COG0482 19 AAYLLKEQGYEVIGLFMKNWDE-DGGGGCCSEEDLRDAERVADQLGI--PLYVV 69 (356)
T ss_pred HHHHHHHcCCeEEEEEEEeecc-CCCCcCCchhHHHHHHHHHHHhCC--ceEEE
Confidence 5777888899999998887765 222233556777888888888887 44444
No 254
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=50.52 E-value=54 Score=27.07 Aligned_cols=65 Identities=9% Similarity=0.129 Sum_probs=46.9
Q ss_pred hCe-EEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecc----cHHHHHHHHHhCC-cccceeEee
Q 016533 136 LGV-YIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSM----GGHPIWGCLKYIP-HRLAGAGLL 208 (388)
Q Consensus 136 ~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~----Gg~ia~~~a~~~p-~~v~~lil~ 208 (388)
.|. +|+..|.++. ..++.+.+++.+.++++..+. .++|+|+|. |..++-.+|.+.. ..+..++-+
T Consensus 75 ~G~d~V~~~~~~~~------~~~~~e~~a~al~~~i~~~~p--~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 75 MGADRAILVSDRAF------AGADTLATAKALAAAIKKIGV--DLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred cCCCEEEEEecccc------cCCChHHHHHHHHHHHHHhCC--CEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 365 6777776533 245788999999999988774 799999998 8889999888742 234444433
No 255
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=50.46 E-value=17 Score=32.08 Aligned_cols=31 Identities=19% Similarity=-0.058 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHh
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
+.++++..++ ++..++|||+|=..|+.++..
T Consensus 66 l~~~l~~~g~-~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLP-RPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCC-CCcEEeecCHHHHHHHHHhCC
Confidence 3345566688 799999999999988877654
No 256
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=48.99 E-value=22 Score=31.60 Aligned_cols=33 Identities=15% Similarity=0.011 Sum_probs=26.9
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhC
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
-+.+.++..++ ..-.++|.|+|+.++..++..+
T Consensus 32 GvL~aLee~gi-~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGI-PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCC
Confidence 45566666688 5778999999999999999874
No 257
>PRK10279 hypothetical protein; Provisional
Probab=47.79 E-value=18 Score=32.03 Aligned_cols=35 Identities=14% Similarity=0.024 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCc
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPH 200 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 200 (388)
-+.+.++..++ ..-.+.|.|+|+.++..||..+.+
T Consensus 22 GVL~aL~E~gi-~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 22 GVINALKKVGI-EIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHHHcCC-CcCEEEEEcHHHHHHHHHHcCChH
Confidence 35556666788 688999999999999999976543
No 258
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=47.70 E-value=67 Score=26.00 Aligned_cols=58 Identities=17% Similarity=0.406 Sum_probs=38.9
Q ss_pred ccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCc
Q 016533 69 TAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGY 148 (388)
Q Consensus 69 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~ 148 (388)
....+...+|..+....+. .|+|...++....... +. +..+.++.|+.|+.+..-+.
T Consensus 54 ~~~~f~l~dG~~v~lsd~~--------lV~FwaswCp~C~~e~---P~------------L~~l~~~~g~~Vi~Vs~D~~ 110 (181)
T PRK13728 54 APRWFRLSNGRQVNLADWK--------VVLFMQGHCPYCHQFD---PV------------LKQLAQQYGFSVFPYTLDGQ 110 (181)
T ss_pred CCCccCCCCCCEeehhHce--------EEEEECCCCHhHHHHH---HH------------HHHHHHHcCCEEEEEEeCCC
Confidence 4445666688766555442 6677777766666555 55 67888888999998887544
Q ss_pred C
Q 016533 149 G 149 (388)
Q Consensus 149 G 149 (388)
+
T Consensus 111 ~ 111 (181)
T PRK13728 111 G 111 (181)
T ss_pred C
Confidence 3
No 259
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=46.41 E-value=77 Score=28.89 Aligned_cols=90 Identities=18% Similarity=0.181 Sum_probs=58.8
Q ss_pred CceEEEEccCCCCCccccccc----cCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVAN----FLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEEL 169 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~ 169 (388)
...||++||=+.|..-.++-. .+ ..+.++.| .+-.+|.--+|.-+ .+++.+.-+..+
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l-------------~~~~~~r~-lip~~D~AYQGF~~-----GleeDa~~lR~~ 231 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQEL-------------ADLIKERG-LIPFFDIAYQGFAD-----GLEEDAYALRLF 231 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHH-------------HHHHHHcC-Ceeeeehhhhhhcc-----chHHHHHHHHHH
Confidence 467999998887665433100 44 45555556 45567776555432 356666666666
Q ss_pred HHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 170 ADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 170 l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
++.. +-.+|..|+.=..++ |.+||.++.+++.-
T Consensus 232 a~~~----~~~lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 232 AEVG----PELLVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred HHhC----CcEEEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 6652 338888888776664 78999999999863
No 260
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=46.06 E-value=27 Score=27.87 Aligned_cols=33 Identities=12% Similarity=-0.102 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCC
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
+.+.++..++ ..-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi-~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGP-LIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCC
Confidence 4455555577 57799999999999999998754
No 261
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=45.07 E-value=28 Score=28.35 Aligned_cols=32 Identities=19% Similarity=-0.002 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHhC
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
+.+.++..++ ..-.++|-|.||.++..++..+
T Consensus 17 vl~~L~e~~~-~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGI-LKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCC-CcceEEEECHHHHHHHHHHcCC
Confidence 4444455566 5679999999999999999754
No 262
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=44.79 E-value=28 Score=30.22 Aligned_cols=33 Identities=15% Similarity=0.031 Sum_probs=26.5
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhC
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
-+.+.+++.++ ..-.+.|.|+|+.++..+|..+
T Consensus 27 GVL~aLeE~gi-~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGI-PIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCC-CccEEEEECHHHHHHHHHHcCC
Confidence 35556677788 5778999999999999999864
No 263
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=44.69 E-value=22 Score=31.13 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=23.0
Q ss_pred HHHHHhC-CCCcEEEEEecccHHHHHHHHHhC
Q 016533 168 ELADQLG-VGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 168 ~~l~~l~-~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
+.++..+ + .+-.++|||+|=..|+.++...
T Consensus 74 ~~l~~~g~i-~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGL-KPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCC-CCCEEeecCHHHHHHHHHhCCC
Confidence 3445556 8 6899999999999888877543
No 264
>PRK02399 hypothetical protein; Provisional
Probab=44.20 E-value=2e+02 Score=26.66 Aligned_cols=78 Identities=21% Similarity=0.268 Sum_probs=48.6
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCCCCCCC-----------C-------------hhhHHHHHHHHHHHh----CCCCcEE
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESDPNPNR-----------T-------------VKSDALDIEELADQL----GVGSKFY 180 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-----------~-------------~~~~~~dl~~~l~~l----~~~~~~~ 180 (388)
+.....+.|..|+.+|.-..|......+. + ++.+.+-...+++.| .+ +-++
T Consensus 22 l~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~L~~~g~i-~gvi 100 (406)
T PRK02399 22 VKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAAFVRELYERGDV-AGVI 100 (406)
T ss_pred HHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHHHHHHHHhcCCc-cEEE
Confidence 46667777999999998444422211111 1 123333444455443 35 5789
Q ss_pred EEEecccHHHHHHHHHhCCcccceeEe
Q 016533 181 VIGYSMGGHPIWGCLKYIPHRLAGAGL 207 (388)
Q Consensus 181 lvGhS~Gg~ia~~~a~~~p~~v~~lil 207 (388)
-+|-|.|..++.......|--+-++++
T Consensus 101 glGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 101 GLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred EecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 999999999999988887755544443
No 265
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=44.18 E-value=26 Score=31.11 Aligned_cols=34 Identities=12% Similarity=0.035 Sum_probs=28.3
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCC
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
-+.+.++..++ +.-.+.|-|+|+.++..+|..+.
T Consensus 28 GVl~aL~e~gi-~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEAGI-PIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHcCC-CccEEEecCHHHHHHHHHHcCCC
Confidence 46667777788 78899999999999999998654
No 266
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.50 E-value=41 Score=31.64 Aligned_cols=72 Identities=18% Similarity=0.158 Sum_probs=49.9
Q ss_pred HHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhC---------Cc
Q 016533 130 QEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYI---------PH 200 (388)
Q Consensus 130 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~---------p~ 200 (388)
-..+++.||+|+.+|-.|.-.. -+.+...+..+++.-.+ +.|+.||.-+=|.=++.-+..+ |.
T Consensus 459 I~~a~~~gfDVvLiDTAGR~~~-------~~~lm~~l~k~~~~~~p-d~i~~vgealvg~dsv~q~~~fn~al~~~~~~r 530 (587)
T KOG0781|consen 459 IQEARNQGFDVVLIDTAGRMHN-------NAPLMTSLAKLIKVNKP-DLILFVGEALVGNDSVDQLKKFNRALADHSTPR 530 (587)
T ss_pred HHHHHhcCCCEEEEeccccccC-------ChhHHHHHHHHHhcCCC-ceEEEehhhhhCcHHHHHHHHHHHHHhcCCCcc
Confidence 4455666999999999765332 23456667777777777 7999999888877666544332 44
Q ss_pred ccceeEeec
Q 016533 201 RLAGAGLLA 209 (388)
Q Consensus 201 ~v~~lil~~ 209 (388)
.|+++++.-
T Consensus 531 ~id~~~ltk 539 (587)
T KOG0781|consen 531 LIDGILLTK 539 (587)
T ss_pred ccceEEEEe
Confidence 588887754
No 267
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=43.47 E-value=33 Score=28.77 Aligned_cols=33 Identities=15% Similarity=-0.040 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCC
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
+.+.++..++ +.-.++|-|.|+.++..+|..++
T Consensus 18 vL~aL~e~gi-~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 18 FLAALLEMGL-EPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHcCC-CceEEEEeCHHHHHHHHHHcCCC
Confidence 3444455577 56789999999999999997643
No 268
>PLN02748 tRNA dimethylallyltransferase
Probab=41.77 E-value=1.4e+02 Score=28.50 Aligned_cols=76 Identities=17% Similarity=0.156 Sum_probs=48.5
Q ss_pred CCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC----CCc--CCCC-------------
Q 016533 92 NAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR----AGY--GESD------------- 152 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~----~G~--G~S~------------- 152 (388)
..++.||+|-|-.++...-. ...++...+..+|..|- +|. |...
T Consensus 19 ~~~~~~i~i~GptgsGKs~l-----------------a~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHL 81 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGKSKL-----------------AVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHL 81 (468)
T ss_pred CCCCCEEEEECCCCCCHHHH-----------------HHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCee
Confidence 34566788888777666533 56777777788998883 332 1111
Q ss_pred -----CCCCCChhhHHHHHHHHHHHhC-CCCcEEEEEe
Q 016533 153 -----PNPNRTVKSDALDIEELADQLG-VGSKFYVIGY 184 (388)
Q Consensus 153 -----~~~~~~~~~~~~dl~~~l~~l~-~~~~~~lvGh 184 (388)
+...|+..++.++....|+.+. -++..+|||-
T Consensus 82 id~v~p~e~ysv~~F~~~A~~~I~~I~~rgk~PIlVGG 119 (468)
T PLN02748 82 LGVISPSVEFTAKDFRDHAVPLIEEILSRNGLPVIVGG 119 (468)
T ss_pred EeecCCCCcCcHHHHHHHHHHHHHHHHhcCCCeEEEcC
Confidence 1124688889999888888762 2245677764
No 269
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=41.38 E-value=80 Score=27.52 Aligned_cols=55 Identities=16% Similarity=0.246 Sum_probs=35.8
Q ss_pred HHHHHHhCeEEEEeCCCC--------cCC-------CCCCCCC-ChhhHHHHHHHHHHHhCCCCcEEEEEec
Q 016533 130 QEVIEDLGVYIVSYDRAG--------YGE-------SDPNPNR-TVKSDALDIEELADQLGVGSKFYVIGYS 185 (388)
Q Consensus 130 ~~l~~~~g~~vi~~D~~G--------~G~-------S~~~~~~-~~~~~~~dl~~~l~~l~~~~~~~lvGhS 185 (388)
.+++.. ||+|+..||-= .|. -++..-| +.+.+.+.+.+.++..|...-|.=+||.
T Consensus 266 e~l~~t-G~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 266 EELAQT-GYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFGKSRYIANLGHG 336 (359)
T ss_pred HHHHhc-CCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhCccceEEecCCC
Confidence 566554 99999999941 111 1111112 6778888999999999975455556774
No 270
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=40.41 E-value=65 Score=23.79 Aligned_cols=53 Identities=13% Similarity=0.188 Sum_probs=37.2
Q ss_pred EEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh
Q 016533 98 FFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL 173 (388)
Q Consensus 98 v~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 173 (388)
|++||-.|+..... +..+++..|+.++.+|..-...+ ...+..+.+..++++.
T Consensus 1 ill~G~~G~GKT~l-----------------~~~la~~l~~~~~~i~~~~~~~~------~~~~~~~~i~~~~~~~ 53 (132)
T PF00004_consen 1 ILLHGPPGTGKTTL-----------------ARALAQYLGFPFIEIDGSELISS------YAGDSEQKIRDFFKKA 53 (132)
T ss_dssp EEEESSTTSSHHHH-----------------HHHHHHHTTSEEEEEETTHHHTS------STTHHHHHHHHHHHHH
T ss_pred CEEECcCCCCeeHH-----------------HHHHHhhcccccccccccccccc------cccccccccccccccc
Confidence 68899998888765 68888888899999988644421 3345555666666554
No 271
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=39.97 E-value=30 Score=27.27 Aligned_cols=47 Identities=19% Similarity=0.392 Sum_probs=27.8
Q ss_pred eCCCCcCCCCCC----CCCChhhHHHHH----HHHHHHhCC---CCcEEEEEecccHH
Q 016533 143 YDRAGYGESDPN----PNRTVKSDALDI----EELADQLGV---GSKFYVIGYSMGGH 189 (388)
Q Consensus 143 ~D~~G~G~S~~~----~~~~~~~~~~dl----~~~l~~l~~---~~~~~lvGhS~Gg~ 189 (388)
+-+-|||..... .+++.+++++-+ ..+.+..+. .++|.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 444589987322 245788888888 444444422 16999999999987
No 272
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=39.50 E-value=2.5e+02 Score=26.10 Aligned_cols=78 Identities=19% Similarity=0.240 Sum_probs=49.8
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCCCCCCC-----------C-------------hhhHHHHHHHHHHHh----CCCCcEE
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESDPNPNR-----------T-------------VKSDALDIEELADQL----GVGSKFY 180 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-----------~-------------~~~~~~dl~~~l~~l----~~~~~~~ 180 (388)
+.....+.|..|+.+|.-=.|.+....+. + ++.+++-+..++..+ .+ +-++
T Consensus 20 l~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~g~i-~Gvi 98 (403)
T PF06792_consen 20 LRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYDEGKI-DGVI 98 (403)
T ss_pred HHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhcCCc-cEEE
Confidence 46666777999999998544444322221 1 222333344455444 24 5788
Q ss_pred EEEecccHHHHHHHHHhCCcccceeEe
Q 016533 181 VIGYSMGGHPIWGCLKYIPHRLAGAGL 207 (388)
Q Consensus 181 lvGhS~Gg~ia~~~a~~~p~~v~~lil 207 (388)
-+|-|.|..++.......|--+-++++
T Consensus 99 ~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 99 GIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred EecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 999999999999988887755555543
No 273
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=37.73 E-value=42 Score=26.82 Aligned_cols=32 Identities=13% Similarity=-0.087 Sum_probs=24.6
Q ss_pred HHHHHHhCCCCcEEEEEecccHHHHHHHHHhCC
Q 016533 167 EELADQLGVGSKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 167 ~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
.+.++..++ ..-.+.|-|.|+.++..++..++
T Consensus 19 l~~L~e~g~-~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 19 LRALEEEGI-EIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHCCC-CeeEEEEeCHHHHHHHHHHcCCC
Confidence 344455566 57789999999999999998754
No 274
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=36.57 E-value=35 Score=31.40 Aligned_cols=52 Identities=8% Similarity=-0.028 Sum_probs=33.6
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCCCCCCcccC--CC----chHHHHHHhh
Q 016533 331 VHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSGAGHMFPFT--DG----MSDTIVKAVL 384 (388)
Q Consensus 331 vlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e--~~----~~~~~i~~fl 384 (388)
+|+|+|+.|+..-... .+-+.-.++.+.+.||++|..... ++ +....|.+|-
T Consensus 354 mlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 354 MLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred EEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 9999999999864221 111122467788899999987665 33 3444555553
No 275
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.61 E-value=46 Score=27.76 Aligned_cols=33 Identities=15% Similarity=0.023 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCC
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
+.+.+...++ ..-.+.|.|.|+.++..++...+
T Consensus 16 vl~aL~e~g~-~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGI-EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCc
Confidence 4445555677 56799999999999999999865
No 276
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=35.33 E-value=2.7e+02 Score=24.24 Aligned_cols=65 Identities=14% Similarity=0.121 Sum_probs=42.4
Q ss_pred CeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEE-EEecccHHHHHHHHHhC-CcccceeEeec
Q 016533 137 GVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYV-IGYSMGGHPIWGCLKYI-PHRLAGAGLLA 209 (388)
Q Consensus 137 g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~l-vGhS~Gg~ia~~~a~~~-p~~v~~lil~~ 209 (388)
+++++.+|-+|....+ .+..+.+.++++.... ..++| +.-++++.-+...+..+ +-.++++|+.=
T Consensus 154 ~~D~ViIDt~Gr~~~~-------~~~l~el~~~~~~~~~-~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~TK 220 (270)
T PRK06731 154 RVDYILIDTAGKNYRA-------SETVEEMIETMGQVEP-DYICLTLSASMKSKDMIEIITNFKDIHIDGIVFTK 220 (270)
T ss_pred CCCEEEEECCCCCcCC-------HHHHHHHHHHHhhhCC-CeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEEe
Confidence 6899999998775322 3455566666666655 34554 44567887787777765 34577777743
No 277
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=34.69 E-value=59 Score=28.33 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=27.2
Q ss_pred CcEEEEEecccHHHHHHHH---HhCCcccceeEeecccc
Q 016533 177 SKFYVIGYSMGGHPIWGCL---KYIPHRLAGAGLLAPVV 212 (388)
Q Consensus 177 ~~~~lvGhS~Gg~ia~~~a---~~~p~~v~~lil~~~~~ 212 (388)
.|++|.|.|+|+.-+...- ...-+++++.++.+|..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 5899999999988665432 22346799999999863
No 278
>PRK14974 cell division protein FtsY; Provisional
Probab=34.07 E-value=1.6e+02 Score=26.62 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=46.7
Q ss_pred HhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCC--cccceeEeec
Q 016533 135 DLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIP--HRLAGAGLLA 209 (388)
Q Consensus 135 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lil~~ 209 (388)
..|++++.+|-.|.... -.++.+.+..+.+.++. ..+++|.-+.-|.-+..-+..+. -.+.++|+.-
T Consensus 220 ~~~~DvVLIDTaGr~~~-------~~~lm~eL~~i~~~~~p-d~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlTK 288 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHT-------DANLMDELKKIVRVTKP-DLVIFVGDALAGNDAVEQAREFNEAVGIDGVILTK 288 (336)
T ss_pred hCCCCEEEEECCCccCC-------cHHHHHHHHHHHHhhCC-ceEEEeeccccchhHHHHHHHHHhcCCCCEEEEee
Confidence 34789999999876542 23566777777777777 57778887777777776666543 3577887754
No 279
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=33.73 E-value=2.9e+02 Score=23.58 Aligned_cols=88 Identities=22% Similarity=0.304 Sum_probs=50.2
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCC----------C-CCC---
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPN----------P-NRT--- 158 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~----------~-~~~--- 158 (388)
.-|.+++.||+++...... .. ...+...++.++..+...+|.+... . ...
T Consensus 48 ~~p~v~~~h~~~~~~~~~~---~~-------------~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 111 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSL---GY-------------AVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAV 111 (299)
T ss_pred cCceEEeccCccccccCcc---hH-------------HHHhhhceeEEeeeccccccccccccccccCccccccccchhh
Confidence 3678999999999988765 33 3333344788777775333333211 0 000
Q ss_pred -----hhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCC
Q 016533 159 -----VKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 159 -----~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
......+....... . .+....|+++|+..+..++...+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~--~-~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 112 LLLLSEGVLDKDYRLLGAS--L-GPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred eeeeccccccHHHHHHhhh--c-CcceEEEEEeeccchHHHhhcch
Confidence 01111111111111 1 57889999999998888888766
No 280
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=33.63 E-value=46 Score=25.07 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=17.2
Q ss_pred CCCceEEEEccCCCCCcccc
Q 016533 92 NAKYKIFFVHGFDSCRHDSA 111 (388)
Q Consensus 92 ~~~~~vv~~HG~~~~~~~~~ 111 (388)
+.+|.|+-+||+.|....|-
T Consensus 50 p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCEEEEeecCCCCcHHHH
Confidence 45889999999999998875
No 281
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=33.47 E-value=1.8e+02 Score=23.80 Aligned_cols=66 Identities=15% Similarity=0.073 Sum_probs=44.2
Q ss_pred hCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCc--ccceeEeec
Q 016533 136 LGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPH--RLAGAGLLA 209 (388)
Q Consensus 136 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~ 209 (388)
.+++++.+|-+|... .-.+..+++..+++.... ..++++=-+..+.-.+..+..+-+ .++++|+.-
T Consensus 82 ~~~D~vlIDT~Gr~~-------~d~~~~~el~~~~~~~~~-~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlTK 149 (196)
T PF00448_consen 82 KGYDLVLIDTAGRSP-------RDEELLEELKKLLEALNP-DEVHLVLSATMGQEDLEQALAFYEAFGIDGLILTK 149 (196)
T ss_dssp TTSSEEEEEE-SSSS-------THHHHHHHHHHHHHHHSS-SEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEES
T ss_pred cCCCEEEEecCCcch-------hhHHHHHHHHHHhhhcCC-ccceEEEecccChHHHHHHHHHhhcccCceEEEEe
Confidence 368999999987753 335677888888888876 566666666666666555544322 478888754
No 282
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=33.39 E-value=23 Score=33.14 Aligned_cols=39 Identities=8% Similarity=-0.090 Sum_probs=28.1
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccce
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAG 204 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 204 (388)
-+.+.+...++ .+-++.|-|.|+.+|..++...++.+..
T Consensus 90 GVLkaL~E~gl-~p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 90 GVLKALFEANL-LPRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred HHHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 34444444566 4668999999999999999876655433
No 283
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=33.31 E-value=40 Score=32.59 Aligned_cols=30 Identities=27% Similarity=0.638 Sum_probs=24.6
Q ss_pred HHH-HHhCCCCcEEEEEecccHHHHHHHHHhC
Q 016533 168 ELA-DQLGVGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 168 ~~l-~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
+++ +..|+ ++-.++|||+|=..|+..|.-.
T Consensus 256 ~ll~~~~GI-~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 256 QLLCDEFAI-KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHhcCC-CCCEEeecCHHHHHHHHHhCCC
Confidence 444 46788 7899999999999999888765
No 284
>COG0218 Predicted GTPase [General function prediction only]
Probab=33.24 E-value=40 Score=27.66 Aligned_cols=31 Identities=23% Similarity=0.196 Sum_probs=18.7
Q ss_pred EEEeCCCCcCCCCCCCCCChhhHHHHHHHHHH
Q 016533 140 IVSYDRAGYGESDPNPNRTVKSDALDIEELAD 171 (388)
Q Consensus 140 vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~ 171 (388)
...+|+||||....+. .--+.|.+.+.+.++
T Consensus 72 ~~lVDlPGYGyAkv~k-~~~e~w~~~i~~YL~ 102 (200)
T COG0218 72 LRLVDLPGYGYAKVPK-EVKEKWKKLIEEYLE 102 (200)
T ss_pred EEEEeCCCcccccCCH-HHHHHHHHHHHHHHh
Confidence 6789999999986543 223334444444443
No 285
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=32.64 E-value=86 Score=27.26 Aligned_cols=49 Identities=14% Similarity=0.155 Sum_probs=30.2
Q ss_pred CCccEEEEecCCCCCCcHHHHHHHHHhCCCceEEEeCC-CCCCcccC--CCchHHHHH
Q 016533 327 NEGSVHLWHGDEDRLVPVILQRYIVQRLPWIHYHELSG-AGHMFPFT--DGMSDTIVK 381 (388)
Q Consensus 327 i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e--~~~~~~~i~ 381 (388)
..+||+++.|++ ...++..+.+|+++.+.++. .|++.-.. |++..+.|+
T Consensus 146 ~gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~ 197 (270)
T cd08769 146 FGVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELR 197 (270)
T ss_pred cCCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHH
Confidence 345599999875 34455666679999888874 35443332 444444443
No 286
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=32.39 E-value=66 Score=25.61 Aligned_cols=32 Identities=16% Similarity=-0.032 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHhC
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
+.+.++..++ ..-.+.|-|.|+.++..++...
T Consensus 18 vl~~L~~~~~-~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAGI-PIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcCC-CeeEEEEECHHHHHHHHHHcCC
Confidence 3444455566 5668999999999999998754
No 287
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=32.37 E-value=1.3e+02 Score=24.99 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=26.6
Q ss_pred CceEEEEccCCCCCcc--ccccccCCCCCccccccCchHHHHHHhCeEEEEeCC
Q 016533 94 KYKIFFVHGFDSCRHD--SAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR 145 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 145 (388)
++.|.||+=.+.+... |. .- ....++++|+.+..+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv---~k------------~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYV---EK------------VRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHH---HH------------HHHHHHHcCCeeeeeec
Confidence 5689999987777665 32 22 46777778988887776
No 288
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=32.16 E-value=2.5e+02 Score=22.83 Aligned_cols=61 Identities=16% Similarity=0.205 Sum_probs=36.0
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCC--cCCCCCCCCCChhhHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAG--YGESDPNPNRTVKSDALDIEEL 169 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G--~G~S~~~~~~~~~~~~~dl~~~ 169 (388)
++.+|++-|+.++...-- +..+ ...+.+.|++++.+|-=. ||.+. .-+++.++-.+.+..+
T Consensus 22 ~~~viW~TGLSGsGKSTi-A~al-------------e~~L~~~G~~~y~LDGDnvR~gL~~-dLgFs~edR~eniRRv 84 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTI-ANAL-------------EEKLFAKGYHVYLLDGDNVRHGLNR-DLGFSREDRIENIRRV 84 (197)
T ss_pred CCeEEEeecCCCCCHHHH-HHHH-------------HHHHHHcCCeEEEecChhHhhcccC-CCCCChHHHHHHHHHH
Confidence 678999999998776543 1122 344445599999998522 34332 1234555555554443
No 289
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=32.07 E-value=52 Score=29.78 Aligned_cols=42 Identities=24% Similarity=0.419 Sum_probs=31.5
Q ss_pred CCccccCeEEcCCCcEEEEEEcCCCCC--------CCCceEEEEccCCCC
Q 016533 65 GPAVTAPRIKLRDGRHLAYKEHGVPKD--------NAKYKIFFVHGFDSC 106 (388)
Q Consensus 65 ~~~~~~~~~~~~~g~~l~y~~~g~~~~--------~~~~~vv~~HG~~~~ 106 (388)
..+++.......||.++-|..+|.+++ .++|.|.++|-+...
T Consensus 448 q~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 448 QHPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred hChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 456666677778999999999996653 257888888977644
No 290
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=31.95 E-value=1e+02 Score=27.45 Aligned_cols=62 Identities=19% Similarity=0.219 Sum_probs=40.0
Q ss_pred hCeEEEEeCCCCcCCCCCCC-----------------CCChhhHHH-HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh
Q 016533 136 LGVYIVSYDRAGYGESDPNP-----------------NRTVKSDAL-DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 136 ~g~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~-dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
.+-+++++=.+|.|.-.-.. ..++...+. .-..++++..+++.|+++|+|-|+.++-.+|..
T Consensus 63 d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 63 DGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred CCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 36777777778888652111 012222222 233455666777899999999999999888865
No 291
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=31.31 E-value=50 Score=28.52 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=15.6
Q ss_pred HHHHHhCCCCcEEEEEecccHHH
Q 016533 168 ELADQLGVGSKFYVIGYSMGGHP 190 (388)
Q Consensus 168 ~~l~~l~~~~~~~lvGhS~Gg~i 190 (388)
.+.+.+.--..|+++|||+|..=
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEVD 248 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchhh
Confidence 34444432279999999999753
No 292
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=31.15 E-value=77 Score=26.29 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=33.0
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHH
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQ 172 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~ 172 (388)
+.+|+++||-....-.+..... ....+++.|.+|-.-.++|.|.+ ...+..+++.+++++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~-------------~~~~L~~~~~~v~~~~~~g~gH~------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEK-------------TAEFLKAAGANVEFHEYPGGGHE------ISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHH-------------HHHHHHCTT-GEEEEEETT-SSS--------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHH-------------HHHHHHhcCCCEEEEEcCCCCCC------CCHHHHHHHHHHHhh
Confidence 5689999998877655441112 24455555766666666655544 234666777777654
No 293
>COG3657 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.57 E-value=1e+02 Score=21.76 Aligned_cols=39 Identities=26% Similarity=0.452 Sum_probs=27.7
Q ss_pred CCCCccccCeEEcCCCcEEEEEEcCCCCCCCCceEEEEccCCCCC
Q 016533 63 PGGPAVTAPRIKLRDGRHLAYKEHGVPKDNAKYKIFFVHGFDSCR 107 (388)
Q Consensus 63 ~~~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vv~~HG~~~~~ 107 (388)
|.+..+.+.++....|.+++|...|. ..||++-|+--+.
T Consensus 45 pvgeGV~ELRId~GpGyRvY~~~~g~------v~i~lLCgGdks~ 83 (100)
T COG3657 45 PVGEGVSELRIDHGPGYRVYFQQRGL------VLILLLCGGDKST 83 (100)
T ss_pred ccccchhhheeccCCceEEEEEecCc------EEEEEeccCchhh
Confidence 45566778899999999999998874 3555555544333
No 294
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=30.33 E-value=2e+02 Score=20.97 Aligned_cols=51 Identities=20% Similarity=0.309 Sum_probs=36.0
Q ss_pred EEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh
Q 016533 139 YIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKY 197 (388)
Q Consensus 139 ~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 197 (388)
.+.++++. ++.+.+++.+.+.+.++.++.++.+.++--=+||...-..+..
T Consensus 28 ~i~~~~~~--------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggsp~n~a~~~ 78 (116)
T PF03610_consen 28 NIEAVDLY--------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGGSPFNEAARL 78 (116)
T ss_dssp SEEEEEET--------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTSHHHHHHHHH
T ss_pred cEEEEECc--------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCCccchHHHHH
Confidence 45666653 3458899999999999998754677777777777665554443
No 295
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=30.27 E-value=57 Score=23.85 Aligned_cols=60 Identities=18% Similarity=0.325 Sum_probs=36.5
Q ss_pred EEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCC--CCcCCCCCCCCC--ChhhHHHHHHHHHHH
Q 016533 97 IFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDR--AGYGESDPNPNR--TVKSDALDIEELADQ 172 (388)
Q Consensus 97 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~--~G~G~S~~~~~~--~~~~~~~dl~~~l~~ 172 (388)
||++.|.+++..+.. ...+.++.|+.++..|- +-.+........ ......+.+...++.
T Consensus 1 vI~I~G~~gsGKST~-----------------a~~La~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 63 (121)
T PF13207_consen 1 VIIISGPPGSGKSTL-----------------AKELAERLGFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQ 63 (121)
T ss_dssp EEEEEESTTSSHHHH-----------------HHHHHHHHTCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHH-----------------HHHHHHHHCCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHh
Confidence 578889888887754 57777777999999988 444433221111 122333445555555
Q ss_pred h
Q 016533 173 L 173 (388)
Q Consensus 173 l 173 (388)
+
T Consensus 64 ~ 64 (121)
T PF13207_consen 64 L 64 (121)
T ss_dssp H
T ss_pred h
Confidence 5
No 296
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=29.72 E-value=33 Score=31.59 Aligned_cols=40 Identities=10% Similarity=-0.159 Sum_probs=29.3
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcccceeE
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAG 206 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~li 206 (388)
+.+.+...++ .+-++.|-|.|+.+|..+|..-++.+..++
T Consensus 101 v~kaL~e~gl-~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGL-LPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCC-CCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 4445555577 567899999999999999996555554443
No 297
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=29.67 E-value=29 Score=32.29 Aligned_cols=40 Identities=10% Similarity=-0.112 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCccccee
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGA 205 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 205 (388)
-+.+.+...++ .+-++.|-|.|+.+|..++...++.+..+
T Consensus 84 GVlkaL~e~gl-lp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 84 GVVKALLDADL-LPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHHhCCC-CCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 34444445567 56689999999999999998766666444
No 298
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.44 E-value=2.5e+02 Score=26.32 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=40.7
Q ss_pred hhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCcc--cceeEeec
Q 016533 159 VKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHR--LAGAGLLA 209 (388)
Q Consensus 159 ~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lil~~ 209 (388)
-+++.+.+.++-+.+++ +.+.+|--++=|.-|...|..+.+. |.|+|+.=
T Consensus 197 de~Lm~El~~Ik~~~~P-~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlTK 248 (451)
T COG0541 197 DEELMDELKEIKEVINP-DETLLVVDAMIGQDAVNTAKAFNEALGITGVILTK 248 (451)
T ss_pred cHHHHHHHHHHHhhcCC-CeEEEEEecccchHHHHHHHHHhhhcCCceEEEEc
Confidence 34667778888888888 7899999999999999999887764 67888754
No 299
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=28.40 E-value=76 Score=21.07 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=23.7
Q ss_pred CceEEEEccCC-CCCccccccccCCCCCccccccCchHHHHHHhCeEEEEe--CCCCc
Q 016533 94 KYKIFFVHGFD-SCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSY--DRAGY 148 (388)
Q Consensus 94 ~~~vv~~HG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~--D~~G~ 148 (388)
.|.++++||.. ...+. + +...++++|+.++.+ |+.-|
T Consensus 31 ~~~~~lvhGga~~GaD~------i------------A~~wA~~~gv~~~~~~adW~~h 70 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGADR------I------------AARWARERGVPVIRFPADWQRH 70 (71)
T ss_pred CCCEEEEECCCCCCHHH------H------------HHHHHHHCCCeeEEeCcChhhC
Confidence 46788999977 44443 3 577777778766543 44433
No 300
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=27.96 E-value=1.4e+02 Score=25.37 Aligned_cols=83 Identities=13% Similarity=0.135 Sum_probs=44.5
Q ss_pred CceEEEEccCCCC--CccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcC-----CCCC---CCCC--Chhh
Q 016533 94 KYKIFFVHGFDSC--RHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYG-----ESDP---NPNR--TVKS 161 (388)
Q Consensus 94 ~~~vv~~HG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G-----~S~~---~~~~--~~~~ 161 (388)
++.|+||+=.... ...|. .. +...+++.|+.|..++...-- ..+. ..+. .+-.
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~---~~------------~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~ 95 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYT---AK------------VAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLK 95 (233)
T ss_pred CCeEEEECCCCCCCCHHHHH---HH------------HHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHH
Confidence 5679999876633 33443 32 456667779999888775210 0000 0011 1111
Q ss_pred HHH--HHHHHHH-HhCCCCcEEEEEecccHHHHHH
Q 016533 162 DAL--DIEELAD-QLGVGSKFYVIGYSMGGHPIWG 193 (388)
Q Consensus 162 ~~~--dl~~~l~-~l~~~~~~~lvGhS~Gg~ia~~ 193 (388)
..+ .+.+.|+ .+. +-..++|.|.|+.++..
T Consensus 96 ~l~~~gl~~~l~~~~~--~G~~~~G~SAGAii~~~ 128 (233)
T PRK05282 96 QLYERGLLAPIREAVK--NGTPYIGWSAGANVAGP 128 (233)
T ss_pred HHHHCCcHHHHHHHHH--CCCEEEEECHHHHhhhc
Confidence 111 2333343 333 34789999999988654
No 301
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=27.88 E-value=32 Score=30.57 Aligned_cols=37 Identities=11% Similarity=-0.051 Sum_probs=26.2
Q ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCccc
Q 016533 165 DIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRL 202 (388)
Q Consensus 165 dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 202 (388)
-+.+.+...++ .+-++.|-|.|+.+|..++...++.+
T Consensus 85 GVlkaL~e~gl-~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 85 GVVRTLVEHQL-LPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 34444445577 56679999999999999987644433
No 302
>PF03283 PAE: Pectinacetylesterase
Probab=26.75 E-value=2.3e+02 Score=25.94 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=24.7
Q ss_pred CCcEEEEEecccHHHHHHHH----HhCCcccceeEeeccc
Q 016533 176 GSKFYVIGYSMGGHPIWGCL----KYIPHRLAGAGLLAPV 211 (388)
Q Consensus 176 ~~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lil~~~~ 211 (388)
.++++|.|.|.||.-++..+ ...|..++-..+.+..
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 37999999999999887654 3456554444444443
No 303
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.22 E-value=85 Score=27.11 Aligned_cols=34 Identities=21% Similarity=0.079 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCC-cEEEEEecccHHHHHHHHHhCCc
Q 016533 166 IEELADQLGVGS-KFYVIGYSMGGHPIWGCLKYIPH 200 (388)
Q Consensus 166 l~~~l~~l~~~~-~~~lvGhS~Gg~ia~~~a~~~p~ 200 (388)
+.+.+...++ . .=.++|.|.|+.++..++...+.
T Consensus 16 vl~al~e~~~-~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 16 VLDAFLEAGI-RPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHcCC-CCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3444444455 3 44899999999999999987554
No 304
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=26.02 E-value=2.8e+02 Score=25.04 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=62.9
Q ss_pred eEEcCCCcEEEEEEcCCC--CCCCCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHh--CeEEEEeCCCC
Q 016533 72 RIKLRDGRHLAYKEHGVP--KDNAKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDL--GVYIVSYDRAG 147 (388)
Q Consensus 72 ~~~~~~g~~l~y~~~g~~--~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~vi~~D~~G 147 (388)
+|..+.+-..||...|+. .+..+++=+|+||.|.....-. +.+++++. +..|+..|..+
T Consensus 187 Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGTitg-----------------vGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGTITG-----------------VGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred HhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCceeec-----------------hhHHHHHhCCCCEEEEeCCCc
Confidence 344445556777766642 1123556688898887666544 45666554 47888888764
Q ss_pred cCCCC----CC--C-----CC------ChhhHHHHH--------HHHHHHhCCCCcEEEEEecccHHHH--HHHHHhCCc
Q 016533 148 YGESD----PN--P-----NR------TVKSDALDI--------EELADQLGVGSKFYVIGYSMGGHPI--WGCLKYIPH 200 (388)
Q Consensus 148 ~G~S~----~~--~-----~~------~~~~~~~dl--------~~~l~~l~~~~~~~lvGhS~Gg~ia--~~~a~~~p~ 200 (388)
.-.-+ .+ . +| .....+++. -.....+.. +.=.++|-|-|+.++ ++.|.+ |+
T Consensus 250 S~~~~~~~~g~~~~~I~GIGyg~~p~~ld~~~vd~~~~~~~d~A~~~Ar~La~-eeGll~G~SSGan~~aAl~~a~~-~e 327 (362)
T KOG1252|consen 250 SIVLSGGKPGPTFHKIQGIGYGFIPTTLDTKLVDEVLKVSSDEAIEMARRLAL-EEGLLVGISSGANVAAALKLAKR-PE 327 (362)
T ss_pred ceeccCCCCCCCccceeccccCcCccccchHHHHHHHHhCCHHHHHHHHHHHH-hhCeeecccchHHHHHHHHHHhc-cc
Confidence 31111 11 0 01 111112211 122233333 456899999999865 444444 66
Q ss_pred ccceeEeec
Q 016533 201 RLAGAGLLA 209 (388)
Q Consensus 201 ~v~~lil~~ 209 (388)
.-..++.+-
T Consensus 328 n~~kliV~~ 336 (362)
T KOG1252|consen 328 NAGKLIVVT 336 (362)
T ss_pred cCCcEEEEE
Confidence 555555544
No 305
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=25.62 E-value=2.6e+02 Score=20.65 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=34.6
Q ss_pred EEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHH
Q 016533 139 YIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCL 195 (388)
Q Consensus 139 ~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a 195 (388)
.+.++++. .+.+.+++.+.+.++++..+.++.+.++--=+||.......
T Consensus 28 ~i~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGSp~n~~~ 76 (122)
T cd00006 28 NVEAIDFP--------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGSPNNAAA 76 (122)
T ss_pred CeEEEEeC--------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCCHHHHHH
Confidence 56666653 34578899999999999886545677777666888755433
No 306
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.; GO: 0016740 transferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 2DET_A 2DER_A 2DEU_A 2HMA_A.
Probab=25.51 E-value=56 Score=29.74 Aligned_cols=52 Identities=19% Similarity=0.401 Sum_probs=32.2
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCCCCC-CCChhhHHHHHHHHHHHhCCCCcEEEE
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESDPNP-NRTVKSDALDIEELADQLGVGSKFYVI 182 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~dl~~~l~~l~~~~~~~lv 182 (388)
.+.++++.||+|+.+-++-+...+... .-..++..+|+..+.++|++ +.+++
T Consensus 16 aA~LLk~~G~~V~Gv~m~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI--p~~v~ 68 (356)
T PF03054_consen 16 AAALLKEQGYDVIGVTMRNWDEEDESGKSCCSEEDIEDARRVAEKLGI--PHYVV 68 (356)
T ss_dssp HHHHHHHCT-EEEEEEEE-SS-SSSHH-HHHHHHHHHHHHHHHHHHT----EEEE
T ss_pred HHHHHHhhcccceEEEEEEeccccccCCCCCchhhHHHHHHHHHhcCC--CEEEE
Confidence 678888889999988887665433211 11335667888899999987 44444
No 307
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices. The structure is similar to that of a molybdenum cofactor carrier protein.; PDB: 3IMK_A.
Probab=25.27 E-value=3.1e+02 Score=21.21 Aligned_cols=63 Identities=14% Similarity=0.129 Sum_probs=36.3
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHH
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQ 172 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~ 172 (388)
+..++||.+|......... ..++.+++--++.+|. +....+..+.+++..
T Consensus 64 sDgTlI~~~g~l~GGt~lT------------------~~~a~~~~KP~l~i~~------------~~~~~~~~v~~wl~~ 113 (145)
T PF12694_consen 64 SDGTLIFTRGELTGGTALT------------------VEFARKHGKPCLHIDL------------SIPEAAAAVAEWLRE 113 (145)
T ss_dssp SSEEEEEESSS--HHHHHH------------------HHHHHHTT--EEEETS-------------HHHHHHHHHHHHHH
T ss_pred cCeEEEEecCCCCcHHHHH------------------HHHHHHhCCCEEEEec------------CcccHHHHHHHHHHH
Confidence 4678899888765554333 4556666656666654 455668888888888
Q ss_pred hCCCCcEEEEEecc
Q 016533 173 LGVGSKFYVIGYSM 186 (388)
Q Consensus 173 l~~~~~~~lvGhS~ 186 (388)
.++ .-+.+.|-.-
T Consensus 114 ~~i-~vLNVAGPRe 126 (145)
T PF12694_consen 114 HNI-RVLNVAGPRE 126 (145)
T ss_dssp TT---EEEEE---T
T ss_pred CCc-eEEEeccCcc
Confidence 887 5777777543
No 308
>PRK08118 topology modulation protein; Reviewed
Probab=24.49 E-value=3.6e+02 Score=21.32 Aligned_cols=85 Identities=11% Similarity=0.055 Sum_probs=46.5
Q ss_pred EEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCC
Q 016533 98 FFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGS 177 (388)
Q Consensus 98 v~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~ 177 (388)
|++.|.+|+..... ...+.+..|+.++.+|..-+... ....+-+ ++.++++.+-..+
T Consensus 4 I~I~G~~GsGKSTl-----------------ak~L~~~l~~~~~~lD~l~~~~~--w~~~~~~----~~~~~~~~~~~~~ 60 (167)
T PRK08118 4 IILIGSGGSGKSTL-----------------ARQLGEKLNIPVHHLDALFWKPN--WEGVPKE----EQITVQNELVKED 60 (167)
T ss_pred EEEECCCCCCHHHH-----------------HHHHHHHhCCCceecchhhcccC--CcCCCHH----HHHHHHHHHhcCC
Confidence 67778777776644 57788888888888885432211 0111222 3333333321114
Q ss_pred cEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 178 KFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 178 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
..++=|+ +++.+-..+ . ..+.+|.++..
T Consensus 61 ~wVidG~-~~~~~~~~l--~---~~d~vi~Ld~p 88 (167)
T PRK08118 61 EWIIDGN-YGGTMDIRL--N---AADTIIFLDIP 88 (167)
T ss_pred CEEEeCC-cchHHHHHH--H---hCCEEEEEeCC
Confidence 6777775 555443222 2 36667888754
No 309
>PF11191 DUF2782: Protein of unknown function (DUF2782); InterPro: IPR021357 This is a bacterial family of proteins whose function is unknown.
Probab=24.14 E-value=2.8e+02 Score=19.99 Aligned_cols=17 Identities=24% Similarity=0.442 Sum_probs=7.3
Q ss_pred eEEcCCCcEEE-EEEcCC
Q 016533 72 RIKLRDGRHLA-YKEHGV 88 (388)
Q Consensus 72 ~~~~~~g~~l~-y~~~g~ 88 (388)
.+.-.+|.++. |+..|.
T Consensus 42 ti~~~~~~~ieEyRv~G~ 59 (105)
T PF11191_consen 42 TIIEDGGSTIEEYRVNGQ 59 (105)
T ss_pred EEEecCCcEEEEEEECCe
Confidence 33333444443 555553
No 310
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=23.82 E-value=2.6e+02 Score=26.32 Aligned_cols=65 Identities=11% Similarity=0.033 Sum_probs=44.6
Q ss_pred hCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCc--ccceeEee
Q 016533 136 LGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPH--RLAGAGLL 208 (388)
Q Consensus 136 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~ 208 (388)
.+|+++.+|-+|.-. .-+.+.+.+..+.+.... ..+++|--++-|.-+...+..+.+ .+.++|+.
T Consensus 181 ~~~DvViIDTaGr~~-------~d~~lm~El~~i~~~~~p-~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 181 ENFDIIIVDTSGRHK-------QEDSLFEEMLQVAEAIQP-DNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCCEEEEECCCCCc-------chHHHHHHHHHHhhhcCC-cEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 379999999997532 223466667777666666 577888878777777766666543 46777763
No 311
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=23.40 E-value=1e+02 Score=26.08 Aligned_cols=35 Identities=17% Similarity=0.047 Sum_probs=24.9
Q ss_pred HHHHHHHHhCCC-CcEEEEEecccHHHHHHHHHhCC
Q 016533 165 DIEELADQLGVG-SKFYVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 165 dl~~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~p 199 (388)
-+.+.+...++. +.-.+.|-|.|+.++..++...+
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 344455555652 13489999999999999998754
No 312
>COG3933 Transcriptional antiterminator [Transcription]
Probab=23.22 E-value=2.7e+02 Score=26.19 Aligned_cols=75 Identities=11% Similarity=0.177 Sum_probs=55.2
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHh
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQL 173 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 173 (388)
-.+||..||...-+..- .+ +.+++.. =-+.++|.| -+.++.+..+.+.+.+++.
T Consensus 109 v~vIiiAHG~sTASSma----ev------------anrLL~~--~~~~aiDMP--------Ldvsp~~vle~l~e~~k~~ 162 (470)
T COG3933 109 VKVIIIAHGYSTASSMA----EV------------ANRLLGE--EIFIAIDMP--------LDVSPSDVLEKLKEYLKER 162 (470)
T ss_pred eeEEEEecCcchHHHHH----HH------------HHHHhhc--cceeeecCC--------CcCCHHHHHHHHHHHHHhc
Confidence 35789999987655543 33 5677765 267899986 4568899999999999998
Q ss_pred CCCCcEEEEEecccHHHHHHHH
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCL 195 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a 195 (388)
+. .+=.++=..||......=.
T Consensus 163 ~~-~~GlllLVDMGSL~~f~~~ 183 (470)
T COG3933 163 DY-RSGLLLLVDMGSLTSFGSI 183 (470)
T ss_pred Cc-cCceEEEEecchHHHHHHH
Confidence 87 4546666799998776543
No 313
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=22.97 E-value=1.3e+02 Score=20.36 Aligned_cols=24 Identities=29% Similarity=0.162 Sum_probs=18.7
Q ss_pred CCCCcEEEEEecccHHHHHHHHHhC
Q 016533 174 GVGSKFYVIGYSMGGHPIWGCLKYI 198 (388)
Q Consensus 174 ~~~~~~~lvGhS~Gg~ia~~~a~~~ 198 (388)
+. +++.++|-|-|=.+|...+..+
T Consensus 38 Gp-K~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GP-KKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S--SEEEEES-SSHHHHHHHHHHHH
T ss_pred CC-ceEEEEecCCcccHHHHHHHHh
Confidence 44 7999999999999998877765
No 314
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=22.92 E-value=1.4e+02 Score=26.66 Aligned_cols=20 Identities=25% Similarity=0.298 Sum_probs=17.1
Q ss_pred EEEEecccHHHHHHHHHhCC
Q 016533 180 YVIGYSMGGHPIWGCLKYIP 199 (388)
Q Consensus 180 ~lvGhS~Gg~ia~~~a~~~p 199 (388)
.+.|.|.||.+|..++..++
T Consensus 35 ~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 35 WIAGTSTGGILALALLHGKS 54 (312)
T ss_pred EEEeeChHHHHHHHHHcCCC
Confidence 67899999999999997543
No 315
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=22.65 E-value=2.9e+02 Score=24.64 Aligned_cols=72 Identities=18% Similarity=0.187 Sum_probs=42.3
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCC------cCCCCC--------------
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAG------YGESDP-------------- 153 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G------~G~S~~-------------- 153 (388)
.+.|+++-|-.++...-. ...++++.+..++..|-.= +|...+
T Consensus 3 ~~~~i~i~GptgsGKt~l-----------------a~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid 65 (307)
T PRK00091 3 KPKVIVIVGPTASGKTAL-----------------AIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLID 65 (307)
T ss_pred CceEEEEECCCCcCHHHH-----------------HHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeec
Confidence 345777777777666533 5677777677888777631 111111
Q ss_pred ----CCCCChhhHHHHHHHHHHHh-CCCCcEEEE
Q 016533 154 ----NPNRTVKSDALDIEELADQL-GVGSKFYVI 182 (388)
Q Consensus 154 ----~~~~~~~~~~~dl~~~l~~l-~~~~~~~lv 182 (388)
...++..++.++....++.+ ..+...+|+
T Consensus 66 ~~~~~~~~s~~~f~~~a~~~i~~i~~~gk~pIlv 99 (307)
T PRK00091 66 ILDPTESYSVADFQRDALAAIADILARGKLPILV 99 (307)
T ss_pred ccChhhcccHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 11256777888888877765 222344555
No 316
>PRK11901 hypothetical protein; Reviewed
Probab=22.56 E-value=1.7e+02 Score=26.09 Aligned_cols=22 Identities=18% Similarity=0.203 Sum_probs=13.2
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhCC
Q 016533 331 VHLWHGDEDRLVPVILQRYIVQRLP 355 (388)
Q Consensus 331 vlii~G~~D~~~p~~~~~~~~~~~~ 355 (388)
..+++|..+. .+.++...+.+|
T Consensus 284 YVVvyG~Y~S---r~eAk~Ai~sLP 305 (327)
T PRK11901 284 YVLVSGNYAS---SAEAKRAIATLP 305 (327)
T ss_pred EEEEecCcCC---HHHHHHHHHhCC
Confidence 6677777653 455555555555
No 317
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=22.32 E-value=2e+02 Score=22.67 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHh-CCCCcEEEEEecccHHHHHHHHHhCCcccceeEeeccc
Q 016533 161 SDALDIEELADQL-GVGSKFYVIGYSMGGHPIWGCLKYIPHRLAGAGLLAPV 211 (388)
Q Consensus 161 ~~~~dl~~~l~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 211 (388)
+..+++.++++.+ ..++++.+.|-|..|.+.+.++...++.|+.++=.+|.
T Consensus 52 ~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~ 103 (160)
T PF08484_consen 52 QSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPL 103 (160)
T ss_dssp HHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-GG
T ss_pred HHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChh
Confidence 3344455555444 22368999999999999999988767778877776653
No 318
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=21.28 E-value=2.1e+02 Score=27.72 Aligned_cols=37 Identities=16% Similarity=0.230 Sum_probs=28.5
Q ss_pred CCceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCC
Q 016533 93 AKYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRA 146 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 146 (388)
..+.||++.|.+++..... +..++...||.++..|..
T Consensus 367 ~~p~LVil~G~pGSGKST~-----------------A~~l~~~~g~~~vn~D~l 403 (526)
T TIGR01663 367 APCEMVIAVGFPGAGKSHF-----------------CKKFFQPAGYKHVNADTL 403 (526)
T ss_pred CCceEEEEECCCCCCHHHH-----------------HHHHHHHcCCeEECcHHH
Confidence 4678999999998887654 567777778888877764
No 319
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=21.25 E-value=97 Score=27.40 Aligned_cols=36 Identities=11% Similarity=-0.116 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCCcEEEEEecccHHHHHHHHHhCCccc
Q 016533 166 IEELADQLGVGSKFYVIGYSMGGHPIWGCLKYIPHRL 202 (388)
Q Consensus 166 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 202 (388)
+.+.+...++ .+-++.|.|.|+.+|..++....+.+
T Consensus 87 vl~aL~e~~l-~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 87 VVKALWEQDL-LPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHHHcCC-CCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3334444466 46689999999999999998754444
No 320
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=21.13 E-value=1e+02 Score=25.37 Aligned_cols=16 Identities=25% Similarity=0.395 Sum_probs=12.2
Q ss_pred CCceEEEEccCCCCCc
Q 016533 93 AKYKIFFVHGFDSCRH 108 (388)
Q Consensus 93 ~~~~vv~~HG~~~~~~ 108 (388)
.+++++++||.....-
T Consensus 143 ~~~P~li~hG~~D~~V 158 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRV 158 (213)
T ss_dssp GGSEEEEEEETTBSSS
T ss_pred CCCCEEEEccCCCCcc
Confidence 3689999999876544
No 321
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=21.08 E-value=3.7e+02 Score=24.02 Aligned_cols=47 Identities=13% Similarity=0.155 Sum_probs=32.2
Q ss_pred hHHHHHHhCeEEEEeCCCCcCCCC-CCCCCChhhHHHHHHHHHHHhCC
Q 016533 129 YQEVIEDLGVYIVSYDRAGYGESD-PNPNRTVKSDALDIEELADQLGV 175 (388)
Q Consensus 129 ~~~l~~~~g~~vi~~D~~G~G~S~-~~~~~~~~~~~~dl~~~l~~l~~ 175 (388)
.+.|++..||.|..+=++..-.-+ ....-..+...+|+..++++|++
T Consensus 21 aa~Ll~~~g~~v~gv~M~nWd~~de~~s~cp~e~D~~da~~Vc~~LnI 68 (377)
T KOG2805|consen 21 AARLLAARGYNVTGVFMKNWDSLDEFGSQCPAERDWKDAKRVCKQLNI 68 (377)
T ss_pred HHHHHHhcCCCeeEEeeeccccccccccCCCchhhHHHHHHHHHHhCC
Confidence 577888889998877777662222 22234667777888888888875
No 322
>COG2069 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=20.55 E-value=2.8e+02 Score=24.45 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=36.6
Q ss_pred HHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCCcEEEEEecc
Q 016533 130 QEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGSKFYVIGYSM 186 (388)
Q Consensus 130 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~ 186 (388)
....++.|.+.+.+.+-+.+ ..-.+...++-++.++++++..+. + +++|-|-
T Consensus 157 rk~Vk~fgadmvTiHlIsTd--Pki~D~p~~EAak~lEdvLqAVdv--P-iiiGGSG 208 (403)
T COG2069 157 RKCVKKFGADMVTIHLISTD--PKIKDTPAKEAAKTLEDVLQAVDV--P-IIIGGSG 208 (403)
T ss_pred HHHHHHhCCceEEEEeecCC--ccccCCCHHHHHHHHHHHHHhcCc--C-EEecCCC
Confidence 45556678889998886432 222355788999999999999876 3 5666653
No 323
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=20.55 E-value=3.1e+02 Score=22.72 Aligned_cols=82 Identities=17% Similarity=0.198 Sum_probs=47.0
Q ss_pred CceEEEEccCCCCCccccccccCCCCCccccccCchHHHHHHh-CeEEEEeCCCCcCCCCCC-----------CCCChhh
Q 016533 94 KYKIFFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDL-GVYIVSYDRAGYGESDPN-----------PNRTVKS 161 (388)
Q Consensus 94 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~-----------~~~~~~~ 161 (388)
.+.|++++=.......|. .. +...+.+. |+.+..++... ..+.. ++-+...
T Consensus 31 ~~~i~~IptAs~~~~~~~---~~------------~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~ 93 (212)
T cd03146 31 RPKVLFVPTASGDRDEYT---AR------------FYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFN 93 (212)
T ss_pred CCeEEEECCCCCCHHHHH---HH------------HHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHH
Confidence 567888887776554444 33 46666778 88888887644 11100 0011111
Q ss_pred HHH-----HHHHHHHHhCCCCcEEEEEecccHHHHHH
Q 016533 162 DAL-----DIEELADQLGVGSKFYVIGYSMGGHPIWG 193 (388)
Q Consensus 162 ~~~-----dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~ 193 (388)
+.+ .+.++++..-. +...++|.|.|+.+...
T Consensus 94 ~~~~l~~~~l~~~l~~~~~-~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 94 LLAQWREHGLDAILKAALE-RGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHHcCHHHHHHHHHH-CCCEEEEECHhHHhhCC
Confidence 111 23344443322 45789999999998765
No 324
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=20.24 E-value=83 Score=29.87 Aligned_cols=55 Identities=22% Similarity=0.266 Sum_probs=35.1
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhC------CCc-eEEEeCCCCCCcccC-CCchHHHHHHhhcC
Q 016533 331 VHLWHGDEDRLVPVILQRYIVQRL------PWI-HYHELSGAGHMFPFT-DGMSDTIVKAVLTG 386 (388)
Q Consensus 331 vlii~G~~D~~~p~~~~~~~~~~~------~~~-~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 386 (388)
++..+|-.|..+|+-..+.-.+.+ ++. .+.++ .+||++.++ |+...+.+..|+..
T Consensus 428 w~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 428 WLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIY-EAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred EeeecchhhhcCCCcccccchhhcccccccCCceEEEEe-cCcceeecCChHHHHHHHHHHHhh
Confidence 666666666666654332222222 233 34455 479999999 99999999888754
No 325
>PRK15367 type III secretion system protein SsaD; Provisional
Probab=20.10 E-value=4e+02 Score=24.63 Aligned_cols=56 Identities=13% Similarity=0.129 Sum_probs=39.7
Q ss_pred EEEccCCCCCccccccccCCCCCccccccCchHHHHHHhCeEEEEeCCCCcCCCCCCCCCChhhHHHHHHHHHHHhCCCC
Q 016533 98 FFVHGFDSCRHDSAVANFLSPFMPILWCGGIYQEVIEDLGVYIVSYDRAGYGESDPNPNRTVKSDALDIEELADQLGVGS 177 (388)
Q Consensus 98 v~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~ 177 (388)
|.+-|.+.++.... .+ ..+++..|+. +.-+. .+.++..+.+.+++.++|. +
T Consensus 166 l~LsGyC~~s~~~~---~L-------------q~~L~~~gi~-yr~~l-----------vc~D~L~~~V~~IL~~~GY-~ 216 (395)
T PRK15367 166 LQLSGYCSSSEQMQ---KV-------------RATLESWGVM-YRDGV-----------ICDDLLIREVQDVLIKMGY-P 216 (395)
T ss_pred EEEEEEECChHHHH---HH-------------HHHHHhcCce-eeecc-----------eeHHHHHHHHHHHHHHcCc-C
Confidence 58899999998877 66 6666665532 22222 3788999999999999987 4
Q ss_pred cEEEE
Q 016533 178 KFYVI 182 (388)
Q Consensus 178 ~~~lv 182 (388)
.+.+-
T Consensus 217 ~i~V~ 221 (395)
T PRK15367 217 HAEVS 221 (395)
T ss_pred ceEEe
Confidence 55554
Done!