Query 016535
Match_columns 388
No_of_seqs 149 out of 2046
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 15:12:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016535.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016535hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 100.0 9.7E-34 3.3E-38 270.9 29.7 327 33-388 1-363 (439)
2 3c48_A Predicted glycosyltrans 100.0 9.6E-34 3.3E-38 271.3 29.1 318 31-388 17-358 (438)
3 3okp_A GDP-mannose-dependent a 100.0 2.4E-33 8.1E-38 264.5 27.2 290 32-388 2-312 (394)
4 2r60_A Glycosyl transferase, g 100.0 2.7E-33 9.2E-38 272.8 24.7 328 34-387 7-390 (499)
5 2x6q_A Trehalose-synthase TRET 100.0 2.1E-32 7.1E-37 260.3 25.2 298 28-387 34-347 (416)
6 2jjm_A Glycosyl transferase, g 100.0 2.2E-32 7.4E-37 258.3 23.2 287 37-388 19-317 (394)
7 2iw1_A Lipopolysaccharide core 100.0 2.9E-32 9.8E-37 255.4 22.0 285 35-387 1-302 (374)
8 3s28_A Sucrose synthase 1; gly 100.0 2.5E-32 8.4E-37 274.8 22.1 332 30-388 274-697 (816)
9 2gek_A Phosphatidylinositol ma 100.0 9.2E-32 3.2E-36 254.7 24.7 290 33-387 19-315 (406)
10 2iuy_A Avigt4, glycosyltransfe 100.0 1E-31 3.4E-36 248.9 23.5 250 33-388 2-274 (342)
11 3oy2_A Glycosyltransferase B73 100.0 7.4E-32 2.5E-36 256.2 23.1 287 35-387 1-305 (413)
12 1rzu_A Glycogen synthase 1; gl 100.0 1.5E-31 5E-36 259.6 25.3 325 35-387 1-397 (485)
13 2qzs_A Glycogen synthase; glyc 100.0 8.6E-31 2.9E-35 254.2 29.2 325 35-387 1-398 (485)
14 3vue_A GBSS-I, granule-bound s 100.0 3.9E-30 1.3E-34 250.7 30.3 163 214-388 234-434 (536)
15 2x0d_A WSAF; GT4 family, trans 100.0 1.6E-29 5.6E-34 239.2 19.4 287 30-387 42-346 (413)
16 2hy7_A Glucuronosyltransferase 100.0 6.2E-28 2.1E-32 228.4 17.4 191 140-386 124-322 (406)
17 2vsy_A XCC0866; transferase, g 99.9 3.4E-25 1.2E-29 218.9 21.7 267 31-384 202-481 (568)
18 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.1E-24 3.8E-29 203.1 15.0 269 34-387 6-282 (364)
19 3beo_A UDP-N-acetylglucosamine 99.9 4.9E-22 1.7E-26 185.9 20.8 151 219-386 148-308 (375)
20 1vgv_A UDP-N-acetylglucosamine 99.9 1.7E-21 5.7E-26 182.9 17.7 212 130-387 76-309 (384)
21 3nb0_A Glycogen [starch] synth 99.9 2.6E-21 9E-26 186.9 19.3 244 139-388 180-551 (725)
22 2xci_A KDO-transferase, 3-deox 99.9 1.5E-20 5.3E-25 175.6 23.7 152 215-385 147-308 (374)
23 2bfw_A GLGA glycogen synthase; 99.9 1.2E-21 4E-26 166.9 14.0 128 249-387 2-147 (200)
24 1uqt_A Alpha, alpha-trehalose- 99.9 3.6E-21 1.2E-25 184.6 18.5 145 243-387 218-388 (482)
25 3t5t_A Putative glycosyltransf 99.9 6.6E-20 2.2E-24 174.0 24.4 218 141-387 150-406 (496)
26 3qhp_A Type 1 capsular polysac 99.8 2.9E-21 9.9E-26 159.4 10.6 104 269-386 2-106 (166)
27 2f9f_A First mannosyl transfer 99.8 5.6E-21 1.9E-25 159.5 12.2 107 267-387 21-129 (177)
28 1v4v_A UDP-N-acetylglucosamine 99.8 1.5E-19 5.1E-24 169.2 20.3 152 217-386 142-300 (376)
29 3rhz_A GTF3, nucleotide sugar 99.7 1.8E-15 6.3E-20 138.4 22.5 139 214-387 126-272 (339)
30 3dzc_A UDP-N-acetylglucosamine 99.7 2E-15 7E-20 141.8 18.8 290 31-386 22-333 (396)
31 3otg_A CALG1; calicheamicin, T 99.7 5.8E-15 2E-19 139.6 21.9 286 31-386 17-335 (412)
32 3s2u_A UDP-N-acetylglucosamine 99.7 1.1E-14 3.7E-19 135.5 21.0 269 34-385 2-278 (365)
33 3ot5_A UDP-N-acetylglucosamine 99.6 1.5E-14 5.1E-19 136.2 18.6 290 32-385 25-326 (403)
34 2iyf_A OLED, oleandomycin glyc 99.5 1.5E-12 5E-17 123.9 18.0 297 34-386 7-326 (430)
35 4fzr_A SSFS6; structural genom 99.4 1.4E-12 4.7E-17 122.8 13.6 90 268-385 227-326 (398)
36 3tsa_A SPNG, NDP-rhamnosyltran 99.4 3.7E-12 1.3E-16 119.5 13.4 94 268-385 218-312 (391)
37 3q3e_A HMW1C-like glycosyltran 99.4 8.7E-11 3E-15 113.4 22.8 105 270-386 442-548 (631)
38 3oti_A CALG3; calicheamicin, T 99.3 3.9E-12 1.3E-16 119.6 11.5 94 267-385 231-325 (398)
39 3ia7_A CALG4; glycosysltransfe 99.3 4.3E-10 1.5E-14 105.5 20.8 93 267-385 230-323 (402)
40 4hwg_A UDP-N-acetylglucosamine 99.3 2.4E-10 8.3E-15 106.5 18.1 208 129-387 83-309 (385)
41 2p6p_A Glycosyl transferase; X 99.2 9.5E-10 3.2E-14 102.7 21.6 89 269-386 211-306 (384)
42 3rsc_A CALG2; TDP, enediyne, s 99.2 5E-10 1.7E-14 105.7 16.8 93 267-385 246-339 (415)
43 4amg_A Snogd; transferase, pol 99.0 4.8E-09 1.6E-13 98.4 16.3 94 267-385 236-330 (400)
44 2yjn_A ERYCIII, glycosyltransf 99.0 1.5E-08 5.2E-13 96.4 18.7 90 269-386 268-362 (441)
45 4gyw_A UDP-N-acetylglucosamine 99.0 3.3E-08 1.1E-12 99.5 20.6 104 270-385 524-628 (723)
46 2iya_A OLEI, oleandomycin glyc 99.0 4.1E-08 1.4E-12 92.9 19.8 94 267-386 254-348 (424)
47 3h4t_A Glycosyltransferase GTF 98.9 6.2E-08 2.1E-12 91.1 16.5 89 268-385 221-310 (404)
48 2o6l_A UDP-glucuronosyltransfe 98.7 2.1E-08 7.1E-13 82.2 6.7 89 269-386 22-113 (170)
49 1iir_A Glycosyltransferase GTF 98.6 2.7E-06 9.3E-11 80.0 19.8 88 269-386 239-328 (415)
50 2c4m_A Glycogen phosphorylase; 98.5 2.6E-06 8.9E-11 84.2 17.3 173 214-386 395-647 (796)
51 1rrv_A Glycosyltransferase GTF 98.5 1.2E-05 4E-10 75.7 20.2 87 269-385 238-328 (416)
52 1l5w_A Maltodextrin phosphoryl 98.5 1.8E-06 6.3E-11 85.3 14.1 173 214-386 406-657 (796)
53 2gj4_A Glycogen phosphorylase, 98.3 1.7E-05 5.8E-10 78.8 15.7 173 214-386 430-681 (824)
54 1psw_A ADP-heptose LPS heptosy 98.0 0.00053 1.8E-08 62.6 18.4 99 269-384 181-285 (348)
55 3tov_A Glycosyl transferase fa 97.9 0.0022 7.5E-08 58.6 20.4 98 270-385 187-286 (349)
56 3hbm_A UDP-sugar hydrolase; PS 97.6 5.3E-05 1.8E-09 66.9 5.1 92 270-385 159-250 (282)
57 2acv_A Triterpene UDP-glucosyl 97.6 0.06 2E-06 51.0 26.7 99 268-385 276-376 (463)
58 2gt1_A Lipopolysaccharide hept 97.6 0.0044 1.5E-07 55.9 17.4 98 269-385 179-278 (326)
59 2c1x_A UDP-glucose flavonoid 3 97.4 0.05 1.7E-06 51.5 23.3 96 268-385 271-369 (456)
60 3hbf_A Flavonoid 3-O-glucosylt 97.4 0.074 2.5E-06 50.2 23.6 98 268-385 273-371 (454)
61 2vch_A Hydroquinone glucosyltr 96.8 0.36 1.2E-05 45.9 25.6 43 338-385 341-383 (480)
62 3l7i_A Teichoic acid biosynthe 95.5 0.42 1.4E-05 48.0 16.7 143 219-386 476-641 (729)
63 2jzc_A UDP-N-acetylglucosamine 94.9 0.087 3E-06 44.4 8.0 42 337-384 115-157 (224)
64 1ygp_A Yeast glycogen phosphor 94.4 0.53 1.8E-05 47.1 13.0 116 269-386 600-740 (879)
65 2pq6_A UDP-glucuronosyl/UDP-gl 90.3 2 7E-05 40.6 11.1 98 269-385 296-397 (482)
66 3lkv_A Uncharacterized conserv 90.1 6.4 0.00022 34.4 13.5 157 214-386 62-227 (302)
67 3en0_A Cyanophycinase; serine 81.4 7.3 0.00025 34.0 8.9 110 270-386 27-152 (291)
68 1fy2_A Aspartyl dipeptidase; s 77.5 7.9 0.00027 32.4 7.7 94 283-386 16-120 (229)
69 2l2q_A PTS system, cellobiose- 76.4 19 0.00065 26.0 8.6 76 305-385 5-82 (109)
70 4fyk_A Deoxyribonucleoside 5'- 74.5 16 0.00053 28.4 7.9 34 350-384 63-99 (152)
71 4f3y_A DHPR, dihydrodipicolina 72.7 1.6 5.6E-05 37.7 2.2 42 347-388 65-106 (272)
72 2lk9_A Bone marrow stromal ant 71.7 3.3 0.00011 22.6 2.4 28 3-31 6-33 (35)
73 1e2b_A Enzyme IIB-cellobiose; 71.0 3.9 0.00013 29.6 3.6 69 307-380 7-86 (106)
74 3u80_A 3-dehydroquinate dehydr 68.5 23 0.00079 27.2 7.5 60 322-383 35-103 (151)
75 4had_A Probable oxidoreductase 67.6 12 0.00041 33.4 7.0 68 303-385 47-116 (350)
76 1e5d_A Rubredoxin\:oxygen oxid 64.8 67 0.0023 28.9 11.6 88 283-374 235-324 (402)
77 3lzd_A DPH2; diphthamide biosy 64.5 5.3 0.00018 36.2 3.8 58 304-363 265-322 (378)
78 2ks1_B Epidermal growth factor 63.3 12 0.00041 22.1 3.9 10 23-32 32-41 (44)
79 3ijp_A DHPR, dihydrodipicolina 62.9 2.7 9.4E-05 36.6 1.6 41 347-387 80-120 (288)
80 2ixa_A Alpha-N-acetylgalactosa 62.2 20 0.0007 33.2 7.6 77 303-385 43-121 (444)
81 3rfo_A Methionyl-tRNA formyltr 61.8 38 0.0013 29.8 8.9 37 31-77 1-37 (317)
82 2l2t_A Receptor tyrosine-prote 61.1 14 0.00049 21.8 4.0 9 24-32 32-40 (44)
83 3gd5_A Otcase, ornithine carba 60.8 38 0.0013 29.9 8.6 79 268-364 156-234 (323)
84 2jwa_A Receptor tyrosine-prote 60.0 15 0.0005 21.7 3.8 11 23-33 32-42 (44)
85 2i6u_A Otcase, ornithine carba 59.7 41 0.0014 29.4 8.6 79 269-364 148-226 (307)
86 3lwz_A 3-dehydroquinate dehydr 58.8 34 0.0012 26.3 6.8 60 322-383 38-103 (153)
87 3n8k_A 3-dehydroquinate dehydr 58.7 32 0.0011 27.0 6.7 58 324-383 61-124 (172)
88 4ep1_A Otcase, ornithine carba 58.2 44 0.0015 29.7 8.6 118 222-364 126-256 (340)
89 4fb5_A Probable oxidoreductase 57.6 14 0.00047 33.4 5.5 68 303-385 55-124 (393)
90 3kip_A 3-dehydroquinase, type 57.2 34 0.0012 26.7 6.6 46 338-383 61-113 (167)
91 3q0i_A Methionyl-tRNA formyltr 56.8 76 0.0026 27.9 9.9 98 269-380 7-110 (318)
92 2f62_A Nucleoside 2-deoxyribos 55.8 32 0.0011 26.9 6.6 37 350-386 62-105 (161)
93 1fmt_A Methionyl-tRNA FMet for 54.5 1.1E+02 0.0038 26.7 10.9 98 269-380 3-106 (314)
94 3eag_A UDP-N-acetylmuramate:L- 54.4 62 0.0021 28.4 9.1 37 31-76 1-37 (326)
95 2w37_A Ornithine carbamoyltran 54.3 51 0.0018 29.5 8.3 120 222-364 123-254 (359)
96 1h05_A 3-dehydroquinate dehydr 54.1 44 0.0015 25.5 6.7 61 321-383 32-98 (146)
97 1gqo_A Dehydroquinase; dehydra 54.1 45 0.0015 25.4 6.7 62 320-383 29-96 (143)
98 3geb_A EYES absent homolog 2; 53.6 20 0.00068 30.3 5.1 54 288-357 217-270 (274)
99 3l4e_A Uncharacterized peptida 53.6 35 0.0012 27.9 6.7 81 304-386 27-120 (206)
100 4g65_A TRK system potassium up 52.8 17 0.00057 34.1 5.2 33 34-76 3-35 (461)
101 1pvv_A Otcase, ornithine carba 51.9 48 0.0017 29.1 7.7 78 269-364 155-232 (315)
102 2uyg_A 3-dehydroquinate dehydr 51.7 79 0.0027 24.2 7.9 62 320-383 28-96 (149)
103 1uqr_A 3-dehydroquinate dehydr 50.4 42 0.0014 25.8 6.1 61 321-383 31-97 (154)
104 1zq6_A Otcase, ornithine carba 50.1 30 0.001 31.0 6.2 77 272-364 195-274 (359)
105 3tqq_A Methionyl-tRNA formyltr 50.0 91 0.0031 27.3 9.3 97 270-380 3-105 (314)
106 1ydw_A AX110P-like protein; st 49.9 77 0.0026 28.1 9.1 71 303-385 29-101 (362)
107 3e9m_A Oxidoreductase, GFO/IDH 49.5 51 0.0018 28.9 7.8 69 303-386 28-98 (330)
108 1duv_G Octase-1, ornithine tra 48.8 51 0.0018 29.2 7.4 78 270-364 156-233 (333)
109 4b4o_A Epimerase family protei 48.2 21 0.00071 30.8 4.9 34 35-77 1-34 (298)
110 2d1p_A TUSD, hypothetical UPF0 47.5 33 0.0011 26.1 5.3 40 34-75 12-52 (140)
111 1vlv_A Otcase, ornithine carba 47.2 53 0.0018 29.0 7.2 80 268-364 166-245 (325)
112 4gqa_A NAD binding oxidoreduct 47.1 59 0.002 29.5 8.0 100 268-385 25-126 (412)
113 3evn_A Oxidoreductase, GFO/IDH 46.9 37 0.0012 29.9 6.4 69 303-386 28-98 (329)
114 2khz_A C-MYC-responsive protei 46.3 94 0.0032 24.2 8.0 35 350-385 72-109 (165)
115 3mz0_A Inositol 2-dehydrogenas 45.8 59 0.002 28.7 7.6 69 303-385 26-96 (344)
116 3rot_A ABC sugar transporter, 45.5 69 0.0024 27.2 7.9 32 356-387 62-94 (297)
117 3vk5_A MOEO5; TIM barrel, tran 45.2 20 0.0007 30.9 4.1 80 277-367 44-128 (286)
118 2bln_A Protein YFBG; transfera 44.7 1.4E+02 0.0047 26.0 9.6 96 271-380 2-100 (305)
119 3cs3_A Sugar-binding transcrip 44.3 45 0.0015 28.0 6.4 46 28-76 2-47 (277)
120 3g1w_A Sugar ABC transporter; 44.0 1.2E+02 0.0039 25.8 9.2 23 284-311 19-41 (305)
121 3nbm_A PTS system, lactose-spe 44.0 31 0.0011 24.9 4.4 63 320-386 21-85 (108)
122 1s2d_A Purine trans deoxyribos 43.7 85 0.0029 24.6 7.3 35 351-385 77-115 (167)
123 3hly_A Flavodoxin-like domain; 43.5 28 0.00094 27.0 4.5 37 35-75 1-37 (161)
124 3rfo_A Methionyl-tRNA formyltr 43.4 1.7E+02 0.0057 25.6 10.3 97 270-380 5-107 (317)
125 3moi_A Probable dehydrogenase; 43.1 59 0.002 29.3 7.3 68 303-386 26-95 (387)
126 2hy5_A Putative sulfurtransfer 43.0 42 0.0014 24.9 5.2 39 35-75 1-40 (130)
127 1dxh_A Ornithine carbamoyltran 42.6 50 0.0017 29.3 6.4 79 269-364 155-233 (335)
128 3ksm_A ABC-type sugar transpor 42.6 1.4E+02 0.0049 24.6 15.4 64 282-355 169-232 (276)
129 2ki0_A DS119; beta-alpha-beta, 42.2 7.9 0.00027 20.5 0.6 32 304-342 4-35 (36)
130 2pq6_A UDP-glucuronosyl/UDP-gl 41.8 20 0.00067 33.7 3.9 38 34-76 8-45 (482)
131 4gx0_A TRKA domain protein; me 41.6 80 0.0027 30.2 8.3 26 49-76 134-159 (565)
132 3uuw_A Putative oxidoreductase 41.0 70 0.0024 27.6 7.2 67 303-385 30-96 (308)
133 1ycg_A Nitric oxide reductase; 41.0 1.9E+02 0.0066 25.7 12.7 98 282-383 233-339 (398)
134 2l8s_A Integrin alpha-1; trans 40.9 23 0.00079 21.9 2.7 20 3-22 4-23 (54)
135 3ohs_X Trans-1,2-dihydrobenzen 40.2 36 0.0012 29.9 5.3 68 304-386 28-97 (334)
136 3tml_A 2-dehydro-3-deoxyphosph 39.9 1.7E+02 0.0059 25.2 9.2 99 282-386 28-138 (288)
137 1fmt_A Methionyl-tRNA FMet for 39.6 1.5E+02 0.0051 25.9 9.0 34 33-76 2-35 (314)
138 3q0i_A Methionyl-tRNA formyltr 39.5 1.6E+02 0.0055 25.7 9.2 34 33-76 6-39 (318)
139 3tqq_A Methionyl-tRNA formyltr 39.5 1.1E+02 0.0037 26.8 8.0 34 33-76 1-34 (314)
140 1vs1_A 3-deoxy-7-phosphoheptul 39.3 1.8E+02 0.0062 24.8 11.9 103 273-386 40-152 (276)
141 4h3v_A Oxidoreductase domain p 39.0 40 0.0014 30.2 5.4 83 287-385 21-105 (390)
142 3tpf_A Otcase, ornithine carba 38.8 1.2E+02 0.0043 26.3 8.2 77 269-364 146-223 (307)
143 8abp_A L-arabinose-binding pro 38.2 65 0.0022 27.4 6.6 22 286-312 19-40 (306)
144 2ohh_A Type A flavoprotein FPR 38.2 1.9E+02 0.0066 25.8 10.1 84 284-372 240-326 (404)
145 1zco_A 2-dehydro-3-deoxyphosph 38.2 1.8E+02 0.0063 24.6 10.3 100 277-386 29-137 (262)
146 1p9l_A Dihydrodipicolinate red 38.0 55 0.0019 27.5 5.7 9 376-384 66-74 (245)
147 3oqb_A Oxidoreductase; structu 37.6 65 0.0022 28.9 6.6 54 324-385 58-113 (383)
148 3u3x_A Oxidoreductase; structu 37.4 1.5E+02 0.0052 26.2 9.0 92 269-386 26-119 (361)
149 3av3_A Phosphoribosylglycinami 37.4 1.7E+02 0.0057 23.8 9.6 22 356-377 83-104 (212)
150 3q98_A Transcarbamylase; rossm 37.3 2.2E+02 0.0076 25.8 9.9 52 33-86 190-241 (399)
151 4h31_A Otcase, ornithine carba 37.1 80 0.0027 28.3 6.9 79 269-364 181-259 (358)
152 3ec7_A Putative dehydrogenase; 36.6 84 0.0029 27.9 7.1 69 303-385 47-117 (357)
153 2ho3_A Oxidoreductase, GFO/IDH 36.5 86 0.0029 27.3 7.1 69 303-386 24-93 (325)
154 3miz_A Putative transcriptiona 36.3 52 0.0018 28.0 5.6 47 27-76 6-53 (301)
155 1l0b_A BRCA1; TANDEM-BRCT, thr 36.1 1.2E+02 0.0043 24.6 7.7 68 303-387 6-76 (229)
156 4hkt_A Inositol 2-dehydrogenas 36.1 65 0.0022 28.2 6.2 67 303-386 26-94 (331)
157 3hs3_A Ribose operon repressor 36.0 41 0.0014 28.4 4.8 47 27-76 3-50 (277)
158 1rpn_A GDP-mannose 4,6-dehydra 35.9 40 0.0014 29.3 4.9 44 24-76 4-47 (335)
159 2xzm_B RPS0E; ribosome, transl 35.8 33 0.0011 28.8 3.8 92 281-384 47-142 (241)
160 1vl6_A Malate oxidoreductase; 35.7 33 0.0011 31.1 4.1 36 347-383 255-290 (388)
161 3l6u_A ABC-type sugar transpor 35.6 40 0.0014 28.6 4.7 47 28-77 2-48 (293)
162 3ezy_A Dehydrogenase; structur 35.6 60 0.0021 28.6 6.0 69 303-386 25-95 (344)
163 1vr6_A Phospho-2-dehydro-3-deo 35.5 2.4E+02 0.0081 25.1 11.1 104 272-386 107-220 (350)
164 2m1z_A LMO0427 protein; homolo 34.9 27 0.00091 25.2 2.7 62 322-387 22-85 (106)
165 3euw_A MYO-inositol dehydrogen 34.9 78 0.0027 27.9 6.6 68 303-386 27-96 (344)
166 3nvt_A 3-deoxy-D-arabino-heptu 34.5 2.6E+02 0.0089 25.2 10.6 103 272-386 144-256 (385)
167 3ip3_A Oxidoreductase, putativ 34.4 51 0.0017 29.0 5.2 73 303-385 23-97 (337)
168 3v5n_A Oxidoreductase; structu 34.1 53 0.0018 30.1 5.4 56 324-385 78-140 (417)
169 3fni_A Putative diflavin flavo 34.1 63 0.0022 24.9 5.2 28 47-76 15-42 (159)
170 2kng_A Protein LSR2; DNA-bindi 34.0 26 0.0009 21.7 2.2 33 321-356 14-46 (55)
171 4a8t_A Putrescine carbamoyltra 33.9 80 0.0027 28.0 6.3 48 31-87 172-219 (339)
172 3db2_A Putative NADPH-dependen 33.7 66 0.0023 28.5 5.9 68 303-386 28-97 (354)
173 3kke_A LACI family transcripti 33.6 56 0.0019 27.9 5.3 48 27-77 8-55 (303)
174 4amu_A Ornithine carbamoyltran 33.5 78 0.0027 28.4 6.2 119 222-364 127-260 (365)
175 3grf_A Ornithine carbamoyltran 33.5 1E+02 0.0035 27.2 6.9 77 270-363 162-242 (328)
176 2yfk_A Aspartate/ornithine car 33.3 1.5E+02 0.005 27.2 8.1 81 269-365 188-273 (418)
177 3gyb_A Transcriptional regulat 33.3 59 0.002 27.2 5.4 44 30-76 1-44 (280)
178 3f6r_A Flavodoxin; FMN binding 33.2 46 0.0016 25.0 4.2 27 47-75 12-38 (148)
179 1tvm_A PTS system, galactitol- 33.2 49 0.0017 23.9 4.1 41 321-364 38-78 (113)
180 1lss_A TRK system potassium up 33.0 54 0.0019 24.0 4.5 33 34-76 4-36 (140)
181 4a8p_A Putrescine carbamoyltra 32.7 85 0.0029 28.1 6.2 48 31-87 150-197 (355)
182 3l6u_A ABC-type sugar transpor 32.7 2.2E+02 0.0074 23.7 9.4 8 304-311 38-45 (293)
183 3rc1_A Sugar 3-ketoreductase; 32.6 75 0.0026 28.1 6.1 67 303-385 51-119 (350)
184 3egc_A Putative ribose operon 32.5 49 0.0017 28.0 4.7 46 29-77 3-48 (291)
185 3e61_A Putative transcriptiona 32.5 40 0.0014 28.3 4.1 46 29-77 3-48 (277)
186 3gv0_A Transcriptional regulat 32.4 70 0.0024 27.0 5.7 48 28-77 2-50 (288)
187 1tlt_A Putative oxidoreductase 32.3 1E+02 0.0035 26.7 6.8 67 303-385 29-95 (319)
188 3qrx_B Melittin; calcium-bindi 32.3 29 0.00098 17.3 1.7 12 20-31 14-25 (26)
189 3l4b_C TRKA K+ channel protien 32.2 76 0.0026 25.7 5.7 26 49-76 7-32 (218)
190 2ywr_A Phosphoribosylglycinami 32.0 2.1E+02 0.0071 23.3 8.2 49 325-375 43-100 (216)
191 3j20_B 30S ribosomal protein S 32.0 30 0.001 28.2 2.9 92 281-384 46-139 (202)
192 3k4h_A Putative transcriptiona 31.9 52 0.0018 27.8 4.8 45 29-76 3-52 (292)
193 2fep_A Catabolite control prot 31.8 50 0.0017 28.0 4.6 47 27-76 9-55 (289)
194 3u7q_A Nitrogenase molybdenum- 31.8 71 0.0024 30.0 5.9 100 281-386 192-298 (492)
195 2rgy_A Transcriptional regulat 31.5 50 0.0017 28.0 4.6 46 28-76 2-47 (290)
196 2bw0_A 10-FTHFDH, 10-formyltet 31.4 2.7E+02 0.0091 24.4 10.1 95 270-380 23-124 (329)
197 3vnd_A TSA, tryptophan synthas 31.4 1.1E+02 0.0036 26.2 6.5 71 281-365 109-181 (267)
198 3s40_A Diacylglycerol kinase; 31.2 96 0.0033 26.8 6.4 39 36-77 11-49 (304)
199 2d8m_A DNA-repair protein XRCC 31.1 1.5E+02 0.0052 21.7 6.7 64 303-386 24-87 (129)
200 3bbn_B Ribosomal protein S2; s 30.8 95 0.0033 25.8 5.9 29 356-385 158-186 (231)
201 3c3k_A Alanine racemase; struc 30.7 55 0.0019 27.6 4.7 45 29-76 3-47 (285)
202 2czc_A Glyceraldehyde-3-phosph 30.6 62 0.0021 28.6 5.1 38 348-386 72-110 (334)
203 3ty2_A 5'-nucleotidase SURE; s 30.6 86 0.003 26.6 5.6 43 29-78 6-48 (261)
204 3ksm_A ABC-type sugar transpor 30.5 2.2E+02 0.0074 23.4 8.6 21 286-311 17-37 (276)
205 3dty_A Oxidoreductase, GFO/IDH 30.1 56 0.0019 29.6 4.8 56 324-385 53-115 (398)
206 3end_A Light-independent proto 30.0 62 0.0021 27.9 5.0 49 25-77 31-79 (307)
207 3m9w_A D-xylose-binding peripl 29.9 2.5E+02 0.0086 23.7 9.9 24 284-312 17-40 (313)
208 3gd5_A Otcase, ornithine carba 29.0 2E+02 0.0068 25.3 7.9 48 31-87 154-201 (323)
209 3g8r_A Probable spore coat pol 28.9 2.3E+02 0.0078 25.2 8.3 65 318-386 76-142 (350)
210 3brq_A HTH-type transcriptiona 28.8 77 0.0026 26.7 5.4 47 27-76 12-60 (296)
211 3clk_A Transcription regulator 28.8 63 0.0022 27.3 4.8 43 28-73 2-44 (290)
212 1t15_A Breast cancer type 1 su 28.7 1.7E+02 0.0057 23.4 7.2 68 303-387 3-73 (214)
213 1f4p_A Flavodoxin; electron tr 28.2 60 0.002 24.3 4.1 25 48-74 12-36 (147)
214 3h75_A Periplasmic sugar-bindi 28.1 59 0.002 28.5 4.6 12 375-386 82-93 (350)
215 2yfk_A Aspartate/ornithine car 28.1 1.5E+02 0.0053 27.0 7.3 43 33-77 187-229 (418)
216 1id1_A Putative potassium chan 28.1 68 0.0023 24.2 4.4 25 50-76 11-35 (153)
217 2z1d_A Hydrogenase expression/ 28.0 1.2E+02 0.0042 27.0 6.2 83 303-387 138-228 (372)
218 1zh8_A Oxidoreductase; TM0312, 27.9 1.1E+02 0.0037 26.9 6.3 68 303-385 43-112 (340)
219 2c4w_A 3-dehydroquinate dehydr 27.9 1.5E+02 0.0053 23.2 6.1 26 358-383 82-108 (176)
220 3mt0_A Uncharacterized protein 27.8 2.7E+02 0.0092 23.3 12.5 100 282-386 18-127 (290)
221 3sho_A Transcriptional regulat 27.7 2.1E+02 0.0073 22.1 9.0 72 306-384 41-119 (187)
222 3uug_A Multiple sugar-binding 27.6 1.6E+02 0.0056 25.1 7.4 23 285-312 19-41 (330)
223 3g85_A Transcriptional regulat 27.6 51 0.0018 27.8 4.0 47 27-76 4-51 (289)
224 3al2_A DNA topoisomerase 2-bin 27.6 1.3E+02 0.0046 24.9 6.4 68 303-387 8-75 (235)
225 3dsa_A D-ribose high-affinity 27.5 1.1E+02 0.0038 23.2 5.2 85 281-373 48-136 (142)
226 3o9z_A Lipopolysaccaride biosy 27.5 91 0.0031 27.1 5.6 47 337-385 49-102 (312)
227 2knc_A Integrin alpha-IIB; tra 27.4 60 0.002 20.1 3.0 16 7-22 11-26 (54)
228 3ew7_A LMO0794 protein; Q8Y8U8 27.4 77 0.0026 25.3 4.9 27 48-76 7-33 (221)
229 2p2s_A Putative oxidoreductase 27.3 2.1E+02 0.007 24.9 8.0 68 303-385 27-96 (336)
230 1pvv_A Otcase, ornithine carba 27.3 1.8E+02 0.006 25.5 7.3 48 30-86 151-198 (315)
231 3l3e_A DNA topoisomerase 2-bin 27.3 1.2E+02 0.0042 21.3 5.4 68 302-386 16-83 (107)
232 1f06_A MESO-diaminopimelate D- 27.2 20 0.00069 31.6 1.2 38 349-386 52-89 (320)
233 2hna_A Protein MIOC, flavodoxi 26.9 81 0.0028 23.6 4.6 34 36-73 3-36 (147)
234 1tjy_A Sugar transport protein 26.8 2.1E+02 0.0071 24.4 7.9 33 355-387 60-93 (316)
235 4ep1_A Otcase, ornithine carba 26.6 2.3E+02 0.0079 25.1 7.9 51 29-88 174-224 (340)
236 3q98_A Transcarbamylase; rossm 26.6 2.4E+02 0.0081 25.6 8.2 80 269-364 191-275 (399)
237 3sds_A Ornithine carbamoyltran 26.4 2E+02 0.007 25.6 7.6 78 268-363 187-266 (353)
238 1dih_A Dihydrodipicolinate red 26.4 20 0.00067 30.9 1.0 39 348-386 65-103 (273)
239 2wqp_A Polysialic acid capsule 26.4 2E+02 0.0067 25.6 7.4 65 318-386 89-155 (349)
240 3cea_A MYO-inositol 2-dehydrog 26.2 1.4E+02 0.0047 26.2 6.7 68 303-385 32-101 (346)
241 3c1a_A Putative oxidoreductase 26.2 70 0.0024 27.8 4.6 38 348-385 60-99 (315)
242 3h5o_A Transcriptional regulat 26.1 1E+02 0.0035 26.8 5.8 46 29-77 57-102 (339)
243 4gi5_A Quinone reductase; prot 26.0 82 0.0028 27.1 4.9 39 31-73 19-59 (280)
244 3auf_A Glycinamide ribonucleot 26.0 2.8E+02 0.0095 22.9 8.9 55 324-380 63-126 (229)
245 3m2t_A Probable dehydrogenase; 25.8 57 0.002 29.1 4.0 69 303-386 29-99 (359)
246 3auf_A Glycinamide ribonucleot 25.7 2.8E+02 0.0096 22.8 9.1 39 32-76 20-58 (229)
247 3p9x_A Phosphoribosylglycinami 25.6 2.7E+02 0.0093 22.6 10.6 55 324-380 43-106 (211)
248 3sqd_A PAX-interacting protein 25.6 54 0.0018 27.0 3.5 64 304-387 16-79 (219)
249 3hr4_A Nitric oxide synthase, 25.6 1.7E+02 0.0059 24.0 6.5 47 24-76 31-77 (219)
250 3h2s_A Putative NADH-flavin re 25.4 83 0.0028 25.2 4.7 27 48-76 7-33 (224)
251 3kjx_A Transcriptional regulat 25.4 1.1E+02 0.0038 26.6 5.9 45 30-77 64-108 (344)
252 2iks_A DNA-binding transcripti 25.3 82 0.0028 26.6 4.9 47 27-76 13-59 (293)
253 3bch_A 40S ribosomal protein S 25.2 60 0.0021 27.4 3.7 92 282-385 86-180 (253)
254 3kb6_A D-lactate dehydrogenase 25.2 75 0.0026 28.1 4.6 38 348-385 187-229 (334)
255 2cok_A Poly [ADP-ribose] polym 24.8 61 0.0021 23.6 3.2 65 303-384 12-76 (113)
256 1oth_A Protein (ornithine tran 24.7 1.2E+02 0.0042 26.6 5.8 79 268-364 154-232 (321)
257 3dbi_A Sugar-binding transcrip 24.6 1E+02 0.0035 26.7 5.5 46 28-76 55-102 (338)
258 1gtz_A 3-dehydroquinate dehydr 24.5 1.8E+02 0.0063 22.4 5.9 61 321-383 36-103 (156)
259 3o1i_D Periplasmic protein TOR 24.5 2.5E+02 0.0085 23.5 7.9 31 355-386 63-94 (304)
260 1f8y_A Nucleoside 2-deoxyribos 24.5 1.4E+02 0.0047 23.1 5.5 36 351-386 74-113 (157)
261 3q2i_A Dehydrogenase; rossmann 24.4 1.3E+02 0.0046 26.4 6.3 67 303-385 37-105 (354)
262 3nav_A Tryptophan synthase alp 24.4 3.3E+02 0.011 23.1 8.5 68 281-362 111-179 (271)
263 1jx7_A Hypothetical protein YC 24.3 1.3E+02 0.0044 21.2 5.1 39 36-76 3-43 (117)
264 3hgm_A Universal stress protei 24.3 2.1E+02 0.007 20.8 7.5 64 321-384 71-146 (147)
265 2z06_A Putative uncharacterize 24.3 92 0.0031 26.3 4.7 85 271-365 2-88 (252)
266 3kjh_A CO dehydrogenase/acetyl 24.2 55 0.0019 26.9 3.5 37 35-77 1-38 (254)
267 3idf_A USP-like protein; unive 24.2 2E+02 0.0069 20.6 7.6 63 321-384 67-136 (138)
268 3sds_A Ornithine carbamoyltran 23.9 1.5E+02 0.0052 26.4 6.3 46 33-87 187-232 (353)
269 2qu7_A Putative transcriptiona 23.9 85 0.0029 26.4 4.7 45 28-76 2-46 (288)
270 2l6w_A Beta-type platelet-deri 29.4 17 0.00057 20.7 0.0 23 7-29 13-35 (39)
271 1gq2_A Malic enzyme; oxidoredu 23.6 2.1E+02 0.0072 27.2 7.4 38 348-385 351-393 (555)
272 3l49_A ABC sugar (ribose) tran 23.5 96 0.0033 26.0 5.0 44 31-77 2-45 (291)
273 3jvd_A Transcriptional regulat 23.5 78 0.0027 27.5 4.5 46 28-76 58-103 (333)
274 2oze_A ORF delta'; para, walke 23.4 85 0.0029 26.8 4.6 44 32-77 32-75 (298)
275 3jy6_A Transcriptional regulat 23.4 93 0.0032 25.9 4.8 44 31-77 4-47 (276)
276 2ef0_A Ornithine carbamoyltran 23.4 2.8E+02 0.0095 24.0 7.7 46 30-84 150-195 (301)
277 1vli_A Spore coat polysacchari 23.2 2E+02 0.0067 26.0 6.9 63 320-386 101-165 (385)
278 2q62_A ARSH; alpha/beta, flavo 23.0 1E+02 0.0036 25.8 4.9 45 28-74 28-72 (247)
279 2q62_A ARSH; alpha/beta, flavo 23.0 2.7E+02 0.0093 23.1 7.5 26 347-372 90-117 (247)
280 3dqp_A Oxidoreductase YLBE; al 23.0 94 0.0032 24.9 4.6 27 48-76 7-33 (219)
281 1vi6_A 30S ribosomal protein S 22.9 76 0.0026 25.9 3.8 91 282-385 51-144 (208)
282 1iv0_A Hypothetical protein; r 22.9 1.6E+02 0.0056 20.5 5.2 25 282-311 34-58 (98)
283 3vzx_A Heptaprenylglyceryl pho 22.8 88 0.003 26.0 4.2 55 304-365 31-85 (228)
284 4ds3_A Phosphoribosylglycinami 22.7 3.1E+02 0.011 22.2 8.7 108 31-165 4-112 (209)
285 3nv9_A Malic enzyme; rossmann 22.6 74 0.0025 29.6 4.0 37 348-385 287-325 (487)
286 3lft_A Uncharacterized protein 22.6 3.4E+02 0.012 22.7 13.4 158 214-386 55-220 (295)
287 2glx_A 1,5-anhydro-D-fructose 22.4 1.4E+02 0.0049 25.8 6.0 67 304-385 24-92 (332)
288 2etx_A Mediator of DNA damage 22.4 64 0.0022 26.2 3.4 62 303-387 11-72 (209)
289 2ark_A Flavodoxin; FMN, struct 22.3 1E+02 0.0035 24.2 4.6 40 32-75 2-42 (188)
290 1ogd_A High affinity ribose tr 22.2 74 0.0025 23.8 3.3 82 280-373 44-125 (131)
291 4id9_A Short-chain dehydrogena 22.2 85 0.0029 27.4 4.5 37 31-76 16-52 (347)
292 4a8t_A Putrescine carbamoyltra 22.1 1.4E+02 0.0047 26.5 5.6 75 269-362 175-249 (339)
293 2k1a_A Integrin alpha-IIB; sin 22.1 90 0.0031 18.1 2.9 16 7-22 9-24 (42)
294 3fwy_A Light-independent proto 22.1 1.1E+02 0.0037 26.8 5.0 38 34-77 48-86 (314)
295 3k9c_A Transcriptional regulat 22.0 2.7E+02 0.0094 23.2 7.7 92 288-388 1-97 (289)
296 3e8x_A Putative NAD-dependent 22.0 1.1E+02 0.0037 24.9 4.8 35 33-76 20-54 (236)
297 4e5v_A Putative THUA-like prot 22.0 1.4E+02 0.0047 25.6 5.5 33 353-385 56-92 (281)
298 1hdo_A Biliverdin IX beta redu 21.9 1.2E+02 0.0041 23.7 5.0 33 35-76 4-36 (206)
299 2g1u_A Hypothetical protein TM 21.8 1.2E+02 0.0041 22.8 4.8 36 31-76 16-51 (155)
300 3aek_B Light-independent proto 21.8 1.8E+02 0.0063 27.5 6.8 79 304-385 153-234 (525)
301 2i6u_A Otcase, ornithine carba 21.8 3.6E+02 0.012 23.4 8.1 50 29-86 143-192 (307)
302 2hsg_A Glucose-resistance amyl 21.7 1.1E+02 0.0038 26.4 5.1 45 29-76 55-99 (332)
303 2hy5_B Intracellular sulfur ox 21.7 1.8E+02 0.0061 21.7 5.5 38 36-75 7-44 (136)
304 3mcu_A Dipicolinate synthase, 21.6 1E+02 0.0035 25.1 4.3 35 35-76 6-42 (207)
305 3ic5_A Putative saccharopine d 21.6 2E+02 0.007 19.8 8.4 47 338-384 52-98 (118)
306 3dfz_A SIRC, precorrin-2 dehyd 21.5 1.7E+02 0.0058 24.1 5.8 26 50-77 39-64 (223)
307 3iz6_A 40S ribosomal protein S 21.5 1.2E+02 0.0041 26.3 4.8 93 281-384 56-150 (305)
308 2o20_A Catabolite control prot 21.3 1E+02 0.0034 26.7 4.7 45 29-76 58-102 (332)
309 3o1i_D Periplasmic protein TOR 21.3 1.5E+02 0.0051 24.9 5.8 65 281-357 176-240 (304)
310 3grf_A Ornithine carbamoyltran 21.3 1.4E+02 0.0048 26.3 5.5 50 31-88 158-209 (328)
311 3loq_A Universal stress protei 21.2 3.6E+02 0.012 22.5 10.1 98 284-386 183-289 (294)
312 3doj_A AT3G25530, dehydrogenas 21.1 1E+02 0.0036 26.6 4.7 36 31-76 18-53 (310)
313 3fs2_A 2-dehydro-3-deoxyphosph 21.1 4E+02 0.014 23.0 10.3 100 281-386 51-162 (298)
314 4dzz_A Plasmid partitioning pr 21.0 1.5E+02 0.0051 23.3 5.4 27 49-77 14-40 (206)
315 3inp_A D-ribulose-phosphate 3- 20.8 1.4E+02 0.0049 25.0 5.2 46 323-368 124-169 (246)
316 1dbq_A Purine repressor; trans 20.7 98 0.0033 25.9 4.4 44 30-76 3-46 (289)
317 3oa2_A WBPB; oxidoreductase, s 20.7 1.5E+02 0.0052 25.7 5.7 32 354-385 72-103 (318)
318 1o0s_A NAD-ME, NAD-dependent m 20.7 2.1E+02 0.0071 27.5 6.7 38 348-385 389-431 (605)
319 1jay_A Coenzyme F420H2:NADP+ o 20.6 1.2E+02 0.0041 24.2 4.7 33 35-76 1-33 (212)
320 4ina_A Saccharopine dehydrogen 20.5 4.7E+02 0.016 23.5 9.6 76 303-384 24-105 (405)
321 3qy9_A DHPR, dihydrodipicolina 20.5 12 0.00039 31.7 -1.7 30 355-386 54-83 (243)
322 3gbv_A Putative LACI-family tr 20.5 3.7E+02 0.013 22.3 8.6 81 308-388 13-103 (304)
323 3fdx_A Putative filament prote 20.5 2.5E+02 0.0084 20.2 7.8 63 321-384 67-141 (143)
324 3rpe_A MDAB, modulator of drug 20.4 3.5E+02 0.012 22.0 8.4 27 346-372 74-102 (218)
325 1i1q_B Anthranilate synthase c 20.2 2.1E+02 0.0071 22.5 6.1 61 323-385 14-82 (192)
326 4ew6_A D-galactose-1-dehydroge 20.2 1.1E+02 0.0036 26.9 4.6 38 348-385 71-111 (330)
327 3e3m_A Transcriptional regulat 20.2 1E+02 0.0035 27.0 4.5 44 30-76 66-109 (355)
328 1bvy_F Protein (cytochrome P45 20.1 83 0.0028 25.2 3.5 37 34-74 21-57 (191)
329 3dtt_A NADP oxidoreductase; st 20.1 1.2E+02 0.0039 25.2 4.6 36 31-76 16-51 (245)
330 4a8p_A Putrescine carbamoyltra 20.0 1.4E+02 0.0049 26.6 5.3 75 269-362 153-227 (355)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=9.7e-34 Score=270.89 Aligned_cols=327 Identities=16% Similarity=0.056 Sum_probs=214.1
Q ss_pred ccceEEEeccccC--CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHH---hhh--h--hceecCCCCeeE
Q 016535 33 RTTSVAFFHPNTN--DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR---AVD--R--FGVELLHPPKVV 103 (388)
Q Consensus 33 ~~~~I~~~~p~~~--~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~---~~~--~--~~i~~~~~~~~~ 103 (388)
|+|||+++.+... ..||+++++.+++++|.++| |+|+++++...........+ ... . ......+++.++
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 78 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIY 78 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEE
Confidence 5799999986642 34699999999999999999 88999986642111100000 000 0 000022344555
Q ss_pred Eecccccccc-CCCC-ceeh-hhhhhhHHHHHHHHHh-----hcCCcEEEecCCcccccc--hhhhcCCeEEEEEecccc
Q 016535 104 HLYRRKWIEE-STYP-RFTM-IGQSFGSVYLSWEALC-----KFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTI 173 (388)
Q Consensus 104 ~~~~~~~~~~-~~~~-~~~~-~~~~~~~~~~~~~~l~-----~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~ 173 (388)
.++. ..... ..+. .... ............+.+. ..+||+||.+.......+ +.+..++|.++++|....
T Consensus 79 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 79 RIGG-GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp EEES-GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred Eecc-hhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 5543 22221 1221 1111 1111111111222222 458999987754332222 335679999999997542
Q ss_pred chhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCC
Q 016535 174 SLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP 252 (388)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ng 252 (388)
......... . ..+..........+++..++.+|.++++|+..++.....++. ..++.++|||
T Consensus 158 ~~~~~~~~~-------------~----~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ng 220 (439)
T 3fro_A 158 SKLPAFYFH-------------E----AGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG 220 (439)
T ss_dssp CCEEHHHHH-------------H----TTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCC
T ss_pred ccCchHHhC-------------c----cccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCC
Confidence 110000000 0 000000000001246777788999999999999885553322 5789999999
Q ss_pred CCCCCCccCCCCC---------------CCCCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCC
Q 016535 253 CDTSGLQVLPLER---------------STEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK 316 (388)
Q Consensus 253 vd~~~~~~~~~~~---------------~~~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~ 316 (388)
+|.+.+.+..... .++ ..++|+||+. +.||++.+++|++.+.++... ++++|+++|+|
T Consensus 221 vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 294 (439)
T 3fro_A 221 IDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 294 (439)
T ss_dssp CCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGG--GGEEEEEECCC---
T ss_pred CCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccC--CCeEEEEEcCC---
Confidence 9998886542110 133 8999999999 999999999999999875311 58999999987
Q ss_pred ccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 317 SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 317 ~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+.++.+.+++++++++ +.+.|.|+++++++.++|+.||++|+||..|+||++++|||+||+|||+++.+
T Consensus 295 -~~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~ 363 (439)
T 3fro_A 295 -DPELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG 363 (439)
T ss_dssp -CHHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST
T ss_pred -ChhHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC
Confidence 4555678999999988 68889999999999999999999999999999999999999999999999864
No 2
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=9.6e-34 Score=271.27 Aligned_cols=318 Identities=15% Similarity=0.121 Sum_probs=209.0
Q ss_pred cCccceEEEeccccC--------CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCee
Q 016535 31 RNRTTSVAFFHPNTN--------DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKV 102 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~--------~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 102 (388)
.++.|||+++.+... ..||+++++.+++++|.++| |+|++++..... . . . ......+++.+
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~--~-~----~--~~~~~~~~v~v 85 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRP--S-Q----G--EIVRVAENLRV 85 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECCCG--G-G----C--SEEEEETTEEE
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC--CEEEEEecCCCC--C-C----c--ccccccCCeEE
Confidence 446789999975432 34699999999999999999 888888865411 0 0 0 00112233344
Q ss_pred EEeccccccccCCCCceehhhhhhhHHH-HHHHH-Hhhc-CCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhh
Q 016535 103 VHLYRRKWIEESTYPRFTMIGQSFGSVY-LSWEA-LCKF-TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDM 177 (388)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-l~~~-~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~ 177 (388)
+.+....+.. ..... +...+..+. ...+. +.+. +||+||.+........ +++..++|.++++|.......
T Consensus 86 ~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~- 160 (438)
T 3c48_A 86 INIAAGPYEG---LSKEE-LPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN- 160 (438)
T ss_dssp EEECCSCSSS---CCGGG-GGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS-
T ss_pred EEecCCCccc---cchhH-HHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc-
Confidence 4443211100 00000 111111111 11122 3333 4999986643221111 344678999999986431100
Q ss_pred hhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCC
Q 016535 178 ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTS 256 (388)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~ 256 (388)
. ..... .. .......++++..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+
T Consensus 161 ------~--------~~~~~---~~---~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~ 220 (438)
T 3c48_A 161 ------S--------YRDDS---DT---PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVE 220 (438)
T ss_dssp ------C--------C-------CC---HHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTT
T ss_pred ------c--------ccccc---CC---cchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCcccc
Confidence 0 00000 00 0011223457778889999999999999999887765 46799999999988
Q ss_pred CCccCCCCC----------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHH
Q 016535 257 GLQVLPLER----------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLK 326 (388)
Q Consensus 257 ~~~~~~~~~----------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~ 326 (388)
.+.+.+... ..+..+++++|++.++||++.+++|++.+.++.+. .+++|+++|.... ++++.++++
T Consensus 221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~--~~~~l~i~G~~~~--~g~~~~~l~ 296 (438)
T 3c48_A 221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPD--RNLRVIICGGPSG--PNATPDTYR 296 (438)
T ss_dssp TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTT--CSEEEEEECCBC--------CHHH
T ss_pred ccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCC--cceEEEEEeCCCC--CCcHHHHHH
Confidence 776532211 13568899999999999999999999999887511 2799999997210 123344899
Q ss_pred HHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 327 ~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++++++++.++|.|+|+++++++.++|+.||++|+||..|+||++++|||+||+|||+++.+
T Consensus 297 ~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~ 358 (438)
T 3c48_A 297 HMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG 358 (438)
T ss_dssp HHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT
T ss_pred HHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999863
No 3
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=2.4e-33 Score=264.48 Aligned_cols=290 Identities=17% Similarity=0.158 Sum_probs=208.9
Q ss_pred CccceEEEeccccC-CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccc
Q 016535 32 NRTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (388)
Q Consensus 32 ~~~~~I~~~~p~~~-~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (388)
+++|||+++.+... ..||+++++.+++++| +| ++|++++.... .......... .+..++.+.....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g--~~v~v~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~ 68 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP--ESIVVFASTQN---AEEAHAYDKT------LDYEVIRWPRSVM 68 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG--GGEEEEEECSS---HHHHHHHHTT------CSSEEEEESSSSC
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cC--CeEEEEECCCC---ccchhhhccc------cceEEEEcccccc
Confidence 35789999987443 4569999999999999 58 78888887642 1111122111 1223344333111
Q ss_pred cccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCe-EEEEEeccccchhhhhhhhcCCcc
Q 016535 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCR-VICYTHYPTISLDMISRVREGSSM 187 (388)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~-~i~~~h~p~~~~~~~~~~~~~~~~ 187 (388)
++. ........+.+.+.+||+||.+...+.... +++..++| ++.+.|.....
T Consensus 69 -----~~~-------~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------------- 123 (394)
T 3okp_A 69 -----LPT-------PTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG------------- 123 (394)
T ss_dssp -----CSC-------HHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH-------------
T ss_pred -----ccc-------hhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh-------------
Confidence 111 122233445677889999987655443332 34455675 67777853210
Q ss_pred ccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC---
Q 016535 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE--- 264 (388)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~--- 264 (388)
. .......++.+..++.+|.++++|+..++.+.+.++...++.++|||+|.+.+.+....
T Consensus 124 --------------~---~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~ 186 (394)
T 3okp_A 124 --------------W---SMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKS 186 (394)
T ss_dssp --------------H---TTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHH
T ss_pred --------------h---hhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhH
Confidence 0 01122333466777889999999999999999988766799999999998877652111
Q ss_pred -------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc
Q 016535 265 -------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (388)
Q Consensus 265 -------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (388)
...+...++|+|++.+.||++.+++|++.+.++. ++++|+++|.++..+ .+++++ .++.++
T Consensus 187 ~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~~------~l~~~~--~~~~~~ 254 (394)
T 3okp_A 187 ATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAAR----PDAQLLIVGSGRYES------TLRRLA--TDVSQN 254 (394)
T ss_dssp HHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHS----TTCEEEEECCCTTHH------HHHHHT--GGGGGG
T ss_pred HHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhC----CCeEEEEEcCchHHH------HHHHHH--hcccCe
Confidence 1234589999999999999999999999998885 899999999775433 677776 456689
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCC-------CCCChHHHHHHHhCCceEeeCCC
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMID-------EHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~-------E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|+|+|+++++++.++|+.||++|+||.. |+||++++|||++|+|||+++.+
T Consensus 255 v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~ 312 (394)
T 3okp_A 255 VKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG 312 (394)
T ss_dssp EEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCC
Confidence 9999999999999999999999999998 99999999999999999999863
No 4
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=2.7e-33 Score=272.76 Aligned_cols=328 Identities=16% Similarity=0.067 Sum_probs=215.4
Q ss_pred cceEEEecccc------------CCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceec--CCC
Q 016535 34 TTSVAFFHPNT------------NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL--LHP 99 (388)
Q Consensus 34 ~~~I~~~~p~~------------~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~--~~~ 99 (388)
+|||+++.+.. ...||+++++.+++++|.++| |+|++++....... . ....... ..+ ..+
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~--~-~~~~~~~-~~~~~~~g 80 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRIKDEN--W-PEFSGEI-DYYQETNK 80 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT--CEEEEEEECCCBTT--B-GGGCCSE-EECTTCSS
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC--CeEEEEeCCCCccc--c-cchhhhH-HhccCCCC
Confidence 58999998642 123699999999999999999 88888886532110 0 0000000 011 233
Q ss_pred CeeEEeccccccccCCCCceehhhhhhhHHHHHHHHHhh--cCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccch
Q 016535 100 PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISL 175 (388)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~ 175 (388)
+.++.++.... ....................+.+++ .+||+||.+........ +++..++|.++++|......
T Consensus 81 v~v~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~~~ 157 (499)
T 2r60_A 81 VRIVRIPFGGD---KFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQK 157 (499)
T ss_dssp EEEEEECCSCS---SCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHHHH
T ss_pred eEEEEecCCCc---CCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCccccc
Confidence 44444432110 0000000000001111222334555 48999987654221112 34467899999999643111
Q ss_pred hhhhhhhcCCccccCCccccccchhhhhhhHH-HHHHHHHHHHHhccCCEEEECChhHHHHHHHH--hC------CCCce
Q 016535 176 DMISRVREGSSMYNNNASIAQSNWLSQCKIVY-YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL--WG------IPDRI 246 (388)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~--~~------~~~~~ 246 (388)
. ..... ...........+ +....++++..++.+|.++++|+..++.+.+. ++ ...++
T Consensus 158 ~--~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki 223 (499)
T 2r60_A 158 M--EKLNV------------NTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKF 223 (499)
T ss_dssp H--HTTCC------------CSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGE
T ss_pred c--hhhcc------------CCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCe
Confidence 0 00000 000000111111 11223457888899999999999999998876 65 35689
Q ss_pred EEEcCCCCCCCCccCCCC----------------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEE
Q 016535 247 KRVYPPCDTSGLQVLPLE----------------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFV 310 (388)
Q Consensus 247 ~vi~ngvd~~~~~~~~~~----------------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv 310 (388)
.++|||+|.+.+.+.... ...+..+++|+||+.+.||++.+++|++.+.++.+ ..++++++
T Consensus 224 ~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~---~~~~l~i~ 300 (499)
T 2r60_A 224 SVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQD---KANLVLTL 300 (499)
T ss_dssp EECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHH---HCEEEEEE
T ss_pred EEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCC---CceEEEEE
Confidence 999999998877654320 12355889999999999999999999999987641 24689999
Q ss_pred eCCCCC---------ccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC----cEEEEcCCCCCCChHHHHHHH
Q 016535 311 GSCRNK---------SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA----VVGIHSMIDEHFGISVVEYMA 377 (388)
Q Consensus 311 G~~~~~---------~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a----dv~v~ps~~E~~~~~vlEAma 377 (388)
|+.+.. ++.+|.++++++++++++.++|+|+|+++++++.++|+.| |++|+||..|+||++++|||+
T Consensus 301 G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma 380 (499)
T 2r60_A 301 RGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMA 380 (499)
T ss_dssp SSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHH
T ss_pred CCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHH
Confidence 973211 1223477999999999999999999999999999999999 999999999999999999999
Q ss_pred hCCceEeeCC
Q 016535 378 AGAIPIGKHF 387 (388)
Q Consensus 378 ~G~PVI~~~~ 387 (388)
||+|||+++.
T Consensus 381 ~G~PvI~s~~ 390 (499)
T 2r60_A 381 SGLPAVVTRN 390 (499)
T ss_dssp TTCCEEEESS
T ss_pred cCCCEEEecC
Confidence 9999999986
No 5
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=2.1e-32 Score=260.32 Aligned_cols=298 Identities=17% Similarity=0.165 Sum_probs=197.6
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecc
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR 107 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 107 (388)
-.+..++|||+++.+... +||+++++.+++++|.++| |+|++++.... ....+.... ....+. ....+.+
T Consensus 34 ~~~~~~~mkIl~v~~~~~-~GG~~~~~~~l~~~L~~~G--~~v~v~~~~~~---~~~~~~~~~-~~~~~~-~~~~~~~-- 103 (416)
T 2x6q_A 34 KAEKLKGRSFVHVNSTSF-GGGVAEILHSLVPLLRSIG--IEARWFVIEGP---TEFFNVTKT-FHNALQ-GNESLKL-- 103 (416)
T ss_dssp HHHTTTTCEEEEEESCSS-SSTHHHHHHHHHHHHHHTT--CEEEEEECCCC---HHHHHHHHH-HHHHHT-TCCSCCC--
T ss_pred hhhhhhccEEEEEeCCCC-CCCHHHHHHHHHHHHHhCC--CeEEEEEccCC---cchhhhhcc-cceeec-ccccccc--
Confidence 344567899999998864 4599999999999999999 77777765531 211111110 000010 0000000
Q ss_pred ccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCcc
Q 016535 108 RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSM 187 (388)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~ 187 (388)
+. ..............+.+.+.+||+||.+......+......++|+++++|......
T Consensus 104 ---------~~-~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------------ 161 (416)
T 2x6q_A 104 ---------TE-EMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLWRCHIDLSSP------------ 161 (416)
T ss_dssp ---------CH-HHHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSCEEEECCSCCSSC------------
T ss_pred ---------cH-HHHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCCEEEEEccccCCc------------
Confidence 00 00001111111223345667899998776543332211123388898888633100
Q ss_pred ccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEE-ECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC--
Q 016535 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAM-VNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-- 264 (388)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii-~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~-- 264 (388)
....++ ++.+ .+..+|.++ ++|+..++.+ + ..++.++|||+|...+.+.+..
T Consensus 162 ----------------~~~~~~---~~~~-~~~~~~~~i~~~s~~~~~~~----~-~~~~~vi~ngvd~~~~~~~~~~~~ 216 (416)
T 2x6q_A 162 ----------------NREFWE---FLRR-FVEKYDRYIFHLPEYVQPEL----D-RNKAVIMPPSIDPLSEKNVELKQT 216 (416)
T ss_dssp ----------------CHHHHH---HHHH-HHTTSSEEEESSGGGSCTTS----C-TTTEEECCCCBCTTSTTTSCCCHH
T ss_pred ----------------cHHHHH---HHHH-HHHhCCEEEEechHHHHhhC----C-ccceEEeCCCCChhhhcccccChh
Confidence 001111 2233 344556655 6777655422 2 3588899999997665432111
Q ss_pred ----------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCC
Q 016535 265 ----------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV 334 (388)
Q Consensus 265 ----------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l 334 (388)
...+..+++++||+.+.||++.+++|++.+.++. |+++|+++|+++.. +.++.+.++++++++++
T Consensus 217 ~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~-~~~~~~~l~~~~~~~~~ 291 (416)
T 2x6q_A 217 EILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKI----PGVQLLLVGVMAHD-DPEGWIYFEKTLRKIGE 291 (416)
T ss_dssp HHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHC----TTCEEEEEECCCTT-CHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhC----CCeEEEEEecCccc-chhHHHHHHHHHHHhCC
Confidence 1135688999999999999999999999998885 89999999998653 34556678889999999
Q ss_pred CCcEEEccCCC---HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 335 DGNVEFYKNLL---YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 335 ~~~V~~~g~v~---~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.++|+|+|+++ ++++.++|+.||++|+||..|+||++++|||+||+|||+++.
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~ 347 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV 347 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC
Confidence 89999999654 789999999999999999999999999999999999999985
No 6
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=2.2e-32 Score=258.32 Aligned_cols=287 Identities=16% Similarity=0.111 Sum_probs=198.8
Q ss_pred EEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCC
Q 016535 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (388)
Q Consensus 37 I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (388)
.....|.. ||+++++.+++++|.++| |+|++++..... .. . . ..+++.+..+.... +
T Consensus 19 ~~~~~p~~---GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~---~~-~--~------~~~~i~~~~~~~~~------~ 75 (394)
T 2jjm_A 19 GITCYPSV---GGSGVVGTELGKQLAERG--HEIHFITSGLPF---RL-N--K------VYPNIYFHEVTVNQ------Y 75 (394)
T ss_dssp EEECCC-----CHHHHHHHHHHHHHHHTT--CEEEEECSSCC----------C------CCTTEEEECCCCC--------
T ss_pred ehhcCCCC---CCHHHHHHHHHHHHHhCC--CEEEEEeCCCCC---cc-c--c------cCCceEEEeccccc------c
Confidence 33445654 799999999999999999 889999875411 00 0 0 01111111111110 0
Q ss_pred CceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhh-hc--CCeEEEEEeccccchhhhhhhhcCCccccCC
Q 016535 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR-IF--GCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (388)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~-~~--~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (388)
+.+......+.......+.+.+.+||+||.+...+..+. +++ .. ++|.+.++|..... . ..
T Consensus 76 ~~~~~~~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~----~~-------- 141 (394)
T 2jjm_A 76 SVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT--V----LG-------- 141 (394)
T ss_dssp --CCSCCHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH--T----TT--------
T ss_pred cccccccccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc--c----cC--------
Confidence 001111111222233445567789999987755433222 333 32 58999988863210 0 00
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC-------
Q 016535 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE------- 264 (388)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~------- 264 (388)
.. ..+..+++..++.+|.++++|+..++.+.+.++...++.++|||+|.+.+.+....
T Consensus 142 ----~~-----------~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~ 206 (394)
T 2jjm_A 142 ----SD-----------PSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYG 206 (394)
T ss_dssp ----TC-----------TTTHHHHHHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHHTT
T ss_pred ----CC-----------HHHHHHHHHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchHHHHHHcC
Confidence 00 01122456667889999999999999999887756789999999998877653211
Q ss_pred CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 265 ~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
...++..++++|++.+.||++.+++|++.+.++ ++++|+++|.++.. +++++.++++++.++|.|+|+.
T Consensus 207 ~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-----~~~~l~i~G~g~~~------~~l~~~~~~~~l~~~v~~~g~~ 275 (394)
T 2jjm_A 207 ISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-----VDAKLLLVGDGPEF------CTILQLVKNLHIEDRVLFLGKQ 275 (394)
T ss_dssp CC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-----SCCEEEEECCCTTH------HHHHHHHHTTTCGGGBCCCBSC
T ss_pred CCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-----CCCEEEEECCchHH------HHHHHHHHHcCCCCeEEEeCch
Confidence 013458999999999999999999999999776 47999999977543 3899999999998999999974
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++.++|+.||++|+||..|+||++++|||+||+|||+++.+
T Consensus 276 --~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~ 317 (394)
T 2jjm_A 276 --DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG 317 (394)
T ss_dssp --SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCT
T ss_pred --hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCC
Confidence 889999999999999999999999999999999999999863
No 7
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=2.9e-32 Score=255.36 Aligned_cols=285 Identities=14% Similarity=0.105 Sum_probs=195.7
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||+++.+.....||+++++.+++++|.++| |+|++++...... ..+++++..++...+
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~---------------~~~~~~v~~~~~~~~---- 59 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARG--HHVRVYTQSWEGD---------------CPKAFELIQVPVKSH---- 59 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTT--CCEEEEESEECSC---------------CCTTCEEEECCCCCS----
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCC--CeEEEEecCCCCC---------------CCCCcEEEEEccCcc----
Confidence 7899997764445699999999999999999 7788887653110 011223333322111
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-h-hhhcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~-~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
. .............+.+.+.+||+||.+...+.... + .+....+.+.+.|.
T Consensus 60 --~---~~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 112 (374)
T 2iw1_A 60 --T---NHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKG---------------------- 112 (374)
T ss_dssp --S---HHHHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCSCCHHHHHHHHCC----------------------
T ss_pred --c---chhhHHHHHHHHHHHHhccCCCEEEEecCCCCceeeeccccccceeeeeccc----------------------
Confidence 0 01111222223344567789999987654321111 1 00111111110110
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhc--cCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCC----
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGS--CADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER---- 265 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~---- 265 (388)
+.... ...++.+.++++..++ .+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.+.....
T Consensus 113 ------~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~ 185 (374)
T 2iw1_A 113 ------FLYRL-TSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREI 185 (374)
T ss_dssp ------HHHHT-SHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHH
T ss_pred ------chhhh-cHHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHH
Confidence 00000 0112233445665554 7999999999999999887765 46899999999988776543211
Q ss_pred -------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHH-hcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc
Q 016535 266 -------STEYPAIISVAQFRPEKAHPLQLEAFSVALRK-LDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (388)
Q Consensus 266 -------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~-~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (388)
..++.+++|+||+.+.||++.+++|++.+.++ . ++++|+++|.++. ++++++++++++.++
T Consensus 186 ~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~----~~~~l~i~G~g~~-------~~~~~~~~~~~~~~~ 254 (374)
T 2iw1_A 186 YRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLR----HNTLLFVVGQDKP-------RKFEALAEKLGVRSN 254 (374)
T ss_dssp HHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHH----HTEEEEEESSSCC-------HHHHHHHHHHTCGGG
T ss_pred HHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccC----CceEEEEEcCCCH-------HHHHHHHHHcCCCCc
Confidence 13558999999999999999999999998765 3 5899999998752 278888999999899
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
|+|+|+. +++.++|+.||++|+||..|+||++++|||+||+|||+++.
T Consensus 255 v~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~ 302 (374)
T 2iw1_A 255 VHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAV 302 (374)
T ss_dssp EEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETT
T ss_pred EEECCCc--ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecC
Confidence 9999985 78999999999999999999999999999999999999986
No 8
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=2.5e-32 Score=274.75 Aligned_cols=332 Identities=14% Similarity=0.138 Sum_probs=213.8
Q ss_pred ccCccceEEEecccc----------CCCCChhhHHHH--------HHHHHhhcCCCc--eEEEEecCCCCCchhHHHHhh
Q 016535 30 RRNRTTSVAFFHPNT----------NDGGGGERVLWC--------AVKAIQEESPDL--DCIVYTGDHDAFPDSLLARAV 89 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~----------~~gGG~~~~~~~--------l~~~L~~~g~~~--~v~v~~~~~~~~~~~~~~~~~ 89 (388)
|-.+.++|+++.|.. ...||...++.+ ++++|.++|+++ +|.++|.....+.+ .+..
T Consensus 274 ~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g---~~y~ 350 (816)
T 3s28_A 274 RVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVG---TTCG 350 (816)
T ss_dssp HSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTT---SSTT
T ss_pred cCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCC---CccC
Confidence 445688999987766 455688999985 666677799654 35688876421111 0111
Q ss_pred hhhceec--CCCCeeEEecccc-------ccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhh
Q 016535 90 DRFGVEL--LHPPKVVHLYRRK-------WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR 158 (388)
Q Consensus 90 ~~~~i~~--~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~ 158 (388)
... ..+ .+++.+++++.++ |+++. ..+..+..+.......+......+||+||.+........ +++
T Consensus 351 ~~~-e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~--~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar 427 (816)
T 3s28_A 351 ERL-ERVYDSEYCDILRVPFRTEKGIVRKWISRF--EVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAH 427 (816)
T ss_dssp SSE-EECTTCSSEEEEEECEEETTEEECSCCCTT--TCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHH
T ss_pred Ccc-eeecCcCCeEEEEecCCCccccccccccHH--HHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHH
Confidence 100 111 1244566654322 22211 111112111111111111122347999987643222122 455
Q ss_pred hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHH-HHHHHHHHhccCCEEEECChhHHHHHH
Q 016535 159 IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTF-FSWMYGLVGSCADLAMVNSSWTQSHIE 237 (388)
Q Consensus 159 ~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~ii~~S~~~~~~l~ 237 (388)
..++|.+.+.|......... ....+ ......|... ....++.+++.+|.++++|+..++.+.
T Consensus 428 ~~gvP~V~T~Hsl~~~k~~~----------------~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~ 490 (816)
T 3s28_A 428 KLGVTQCTIAHALEKTKYPD----------------SDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSK 490 (816)
T ss_dssp HHTCCEEEECSCCHHHHSTT----------------TTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCS
T ss_pred HcCCCEEEEEeccccccccc----------------ccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHH
Confidence 78999999998633100000 00000 0111111111 112367789999999999999888532
Q ss_pred HH---hCC-------------------CCceEEEcCCCCCCCCccCCCCC----------------------------CC
Q 016535 238 KL---WGI-------------------PDRIKRVYPPCDTSGLQVLPLER----------------------------ST 267 (388)
Q Consensus 238 ~~---~~~-------------------~~~~~vi~ngvd~~~~~~~~~~~----------------------------~~ 267 (388)
+. +.. ..++.+||||+|.+.|.+..... ..
T Consensus 491 ~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~ 570 (816)
T 3s28_A 491 ETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDK 570 (816)
T ss_dssp SSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCT
T ss_pred HHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCC
Confidence 21 110 12899999999998876543111 24
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC-----CccHHHHHHHHHHHHhcCCCCcEEEcc
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN-----KSDEERLQSLKDKSIELKVDGNVEFYK 342 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~-----~~~~~~~~~l~~~~~~~~l~~~V~~~g 342 (388)
++++|+|+||+.+.||++.+++|++.+.+.. ++++|+++|++++ .++.++.++++++++++++.++|.|+|
T Consensus 571 ~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~----~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG 646 (816)
T 3s28_A 571 KKPILFTMARLDRVKNLSGLVEWYGKNTRLR----ELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWIS 646 (816)
T ss_dssp TSCEEEEECCCCTTTTHHHHHHHHHHCHHHH----HHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEEC
T ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHHhhC----CCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEcc
Confidence 5689999999999999999999999998775 7899999999872 223457789999999999999999999
Q ss_pred CCC----HHHHHHHHH-hCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 343 NLL----YRDLVKLLG-GAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 343 ~v~----~~~l~~~~~-~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++ .+++..+|+ ++|++|+||.+|+||++++||||||+|||+|+.+
T Consensus 647 ~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~G 697 (816)
T 3s28_A 647 SQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 697 (816)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSB
T ss_pred CccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCC
Confidence 554 589999998 5799999999999999999999999999999863
No 9
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=9.2e-32 Score=254.71 Aligned_cols=290 Identities=15% Similarity=0.137 Sum_probs=201.1
Q ss_pred ccceEEEeccccC-CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccc
Q 016535 33 RTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (388)
Q Consensus 33 ~~~~I~~~~p~~~-~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 111 (388)
+.|||+++.++.. ..||+++++.+++++|.++| ++|++++...... .. .+ +.. . .. .++.++....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~--~~-~~----~~~-~-~~-~~~~~~~~~~- 85 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG--HEVSVLAPASPHV--KL-PD----YVV-S-GG-KAVPIPYNGS- 85 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT--CEEEEEESCCTTS--CC-CT----TEE-E-CC-CCC--------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC--CeEEEEecCCccc--cC-Cc----ccc-c-CC-cEEeccccCC-
Confidence 5789999998764 44699999999999999999 8888888764211 00 00 000 0 00 1111111000
Q ss_pred ccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCcccc
Q 016535 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (388)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~ 189 (388)
...+... ........+.+.+.+||+||.+........ +.+..++|.++++|......
T Consensus 86 ----~~~~~~~---~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------------- 144 (406)
T 2gek_A 86 ----VARLRFG---PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS-------------- 144 (406)
T ss_dssp ---------CC---HHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH--------------
T ss_pred ----ccccccc---HHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh--------------
Confidence 0001000 011223344567779999876655433322 33456899999999633110
Q ss_pred CCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC--CCC
Q 016535 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE--RST 267 (388)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~--~~~ 267 (388)
. .......+++ ..++.+|.++++|+..++.+.+.++. .++ ++|||+|.+.+.+.... ...
T Consensus 145 ------------~---~~~~~~~~~~-~~~~~~d~ii~~s~~~~~~~~~~~~~-~~~-vi~~~v~~~~~~~~~~~~~~~~ 206 (406)
T 2gek_A 145 ------------L---TLSVFQGILR-PYHEKIIGRIAVSDLARRWQMEALGS-DAV-EIPNGVDVASFADAPLLDGYPR 206 (406)
T ss_dssp ------------H---HHHHHHSTTH-HHHTTCSEEEESSHHHHHHHHHHHSS-CEE-ECCCCBCHHHHHTCCCCTTCSC
T ss_pred ------------h---hHHHHHHHHH-HHHhhCCEEEECCHHHHHHHHHhcCC-CcE-EecCCCChhhcCCCchhhhccC
Confidence 0 0011111122 66789999999999999999887763 578 99999997655443211 112
Q ss_pred CCcEEEEEccc-CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl-~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+...++|+|++ .+.||++.+++|++.+.++. ++++|+++|.++. +++++.++++ .++|.|+|++++
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~~~~-------~~l~~~~~~~--~~~v~~~g~~~~ 273 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAVLLAALPKLVARF----PDVEILIVGRGDE-------DELREQAGDL--AGHLRFLGQVDD 273 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTS----TTCEEEEESCSCH-------HHHHHHTGGG--GGGEEECCSCCH
T ss_pred CCeEEEEEeeeCccccCHHHHHHHHHHHHHHC----CCeEEEEEcCCcH-------HHHHHHHHhc--cCcEEEEecCCH
Confidence 45799999999 99999999999999998775 7999999998643 3788888776 579999999999
Q ss_pred HHHHHHHHhCcEEEEcCC-CCCCChHHHHHHHhCCceEeeCC
Q 016535 347 RDLVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~-~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.++|+.||++|+||. .|+||++++|||+||+|||+++.
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~ 315 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL 315 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC
Confidence 999999999999999995 99999999999999999999985
No 10
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=1e-31 Score=248.90 Aligned_cols=250 Identities=15% Similarity=0.042 Sum_probs=190.1
Q ss_pred ccceEEEeccc------------c-CCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCC
Q 016535 33 RTTSVAFFHPN------------T-NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHP 99 (388)
Q Consensus 33 ~~~~I~~~~p~------------~-~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~ 99 (388)
+.|||+++.+. . ...||+++++.+++++|.++| |+|++++........ .++.
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G--~~v~v~~~~~~~~~~---------~~~~---- 66 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG--HEVFLLGAPGSPAGR---------PGLT---- 66 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT--CEEEEESCTTSCCCS---------TTEE----
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC--CeEEEEecCCCCCCC---------Ccce----
Confidence 45899999887 1 234699999999999999999 889998876421100 0111
Q ss_pred CeeEEeccccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhh
Q 016535 100 PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMIS 179 (388)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~ 179 (388)
++.. +. .....+.+.+.+||+||.+..... ...++..++| ++++|.....
T Consensus 67 --~~~~-----------~~----------~~~l~~~l~~~~~Dvi~~~~~~~~-~~~~~~~~~p-v~~~h~~~~~----- 116 (342)
T 2iuy_A 67 --VVPA-----------GE----------PEEIERWLRTADVDVVHDHSGGVI-GPAGLPPGTA-FISSHHFTTR----- 116 (342)
T ss_dssp --ECSC-----------CS----------HHHHHHHHHHCCCSEEEECSSSSS-CSTTCCTTCE-EEEEECSSSB-----
T ss_pred --eccC-----------Cc----------HHHHHHHHHhcCCCEEEECCchhh-HHHHhhcCCC-EEEecCCCCC-----
Confidence 1110 00 012334566779999987765432 2245567899 9999964310
Q ss_pred hhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCc
Q 016535 180 RVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ 259 (388)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~ 259 (388)
. ..+|.++++|+..++.+.+ ..++.++|||+|.+.+.
T Consensus 117 -----------------~----------------------~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~~ 153 (342)
T 2iuy_A 117 -----------------P----------------------VNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARYR 153 (342)
T ss_dssp -----------------C----------------------SCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGSC
T ss_pred -----------------c----------------------ccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhcC
Confidence 0 0189999999999998876 45788999999987776
Q ss_pred cCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE
Q 016535 260 VLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339 (388)
Q Consensus 260 ~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~ 339 (388)
+..... .+...++|+||+.+.||++.+++|++.+ +++|+++|.|+..+ .+++++++++ ++|+
T Consensus 154 ~~~~~~-~~~~~i~~vG~~~~~Kg~~~li~a~~~~---------~~~l~i~G~g~~~~------~l~~~~~~~~--~~v~ 215 (342)
T 2iuy_A 154 SAADQV-AKEDFLLFMGRVSPHKGALEAAAFAHAC---------GRRLVLAGPAWEPE------YFDEITRRYG--STVE 215 (342)
T ss_dssp CSTTCC-CCCSCEEEESCCCGGGTHHHHHHHHHHH---------TCCEEEESCCCCHH------HHHHHHHHHT--TTEE
T ss_pred cccccC-CCCCEEEEEeccccccCHHHHHHHHHhc---------CcEEEEEeCcccHH------HHHHHHHHhC--CCEE
Confidence 543321 3446899999999999999999999987 78999999886433 6777777777 6999
Q ss_pred EccCCCHHHHHHHHHhCcEEEEcCC----------CCCCChHHHHHHHhCCceEeeCCC
Q 016535 340 FYKNLLYRDLVKLLGGAVVGIHSMI----------DEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 340 ~~g~v~~~~l~~~~~~adv~v~ps~----------~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|+|+++++++.++|+.||++|+||. .|+||++++|||+||+|||+++.+
T Consensus 216 ~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~ 274 (342)
T 2iuy_A 216 PIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG 274 (342)
T ss_dssp ECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT
T ss_pred EeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC
Confidence 9999999999999999999999999 899999999999999999999863
No 11
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=7.4e-32 Score=256.22 Aligned_cols=287 Identities=14% Similarity=0.034 Sum_probs=197.7
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||+++.|....+||+++++.+++++|.++ + +|++++.... +.........+.......+ .
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~--~V~v~~~~~~--------------g~~~~~~~~~~~~~~~~~~--~ 61 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-H--EVIVFGIHAF--------------GRSVHANIEEFDAQTAEHV--R 61 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-S--EEEEEEESCC--------------SCCSCSSSEEEEHHHHHHH--T
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-C--CeEEEeecCC--------------CcccccccccCCccccccc--c
Confidence 799999988877789999999999999998 4 5555554321 0000000000000000000 0
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-hhhhcC----CeEEEEEeccccchhhhhhhhcCCcccc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFG----CRVICYTHYPTISLDMISRVREGSSMYN 189 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~~~~~~----~~~i~~~h~p~~~~~~~~~~~~~~~~~~ 189 (388)
.+....+ ......+.+.+.+||+||.+........ +....+ .+.+.+.|.....
T Consensus 62 ~~~~~~~------~~~~l~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 120 (413)
T 3oy2_A 62 GLNEQGF------YYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKN--------------- 120 (413)
T ss_dssp TCCSTTC------CHHHHHHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBS---------------
T ss_pred ccccccc------hHHHHHHHHHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchh---------------
Confidence 0000000 0112233456779999977633221112 223333 3344555532100
Q ss_pred CCccccccchhhhhhhHHHHHHHHHHHHHhccCC--EEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCC--CCC
Q 016535 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP--LER 265 (388)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~--~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~--~~~ 265 (388)
. .. . .++.++.+| .++++|+..++.+.+. +.+.++.++|||+|.+.+.... ...
T Consensus 121 -------~--~~----~--------~~~~~~~~~~~~ii~~S~~~~~~~~~~-~~~~~~~vi~ngvd~~~~~~~~~~~~~ 178 (413)
T 3oy2_A 121 -------I--RE----N--------LWWIFSHPKVVGVMAMSKCWISDICNY-GCKVPINIVSHFVDTKTIYDARKLVGL 178 (413)
T ss_dssp -------C--CG----G--------GGGGGGCTTEEEEEESSTHHHHHHHHT-TCCSCEEECCCCCCCCCCTTHHHHTTC
T ss_pred -------h--HH----H--------HHHHHhccCCceEEEcCHHHHHHHHHc-CCCCceEEeCCCCCHHHHHHHHHhcCC
Confidence 0 00 0 244567778 9999999999999884 4467999999999987763211 111
Q ss_pred CC--CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc------
Q 016535 266 ST--EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN------ 337 (388)
Q Consensus 266 ~~--~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~------ 337 (388)
.. +.++++++||+.+.||++.+++|++.+.++. ++++|+++|++++....+..+.+++++++++++++
T Consensus 179 ~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~----~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~ 254 (413)
T 3oy2_A 179 SEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKY----PDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK 254 (413)
T ss_dssp GGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHC----TTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTT
T ss_pred CcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhC----CCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccc
Confidence 12 5689999999999999999999999998885 89999999998765433345689999999999887
Q ss_pred -EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 338 -VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 338 -V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+.+.|+++++++.++|+.||++|+||..|+||++++|||+||+|||+++.
T Consensus 255 vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~ 305 (413)
T 3oy2_A 255 IMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAV 305 (413)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECC
T ss_pred eeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCC
Confidence 88889999999999999999999999999999999999999999999986
No 12
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=1.5e-31 Score=259.55 Aligned_cols=325 Identities=12% Similarity=-0.004 Sum_probs=202.8
Q ss_pred ceEEEeccccC---CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhh-----h--------hce--ec
Q 016535 35 TSVAFFHPNTN---DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-----R--------FGV--EL 96 (388)
Q Consensus 35 ~~I~~~~p~~~---~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~-----~--------~~i--~~ 96 (388)
|||+++.+... ..||+++++.+++++|.++| |+|+|++... ......... . ..+ ..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG--VRTRTLIPGY----PAVKAAVTDPVKCFEFTDLLGEKADLLEVQ 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECC----HHHHHHCCSCEEEEEESCSSSCCEEEEEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC--CeEEEEeccc----ccccccccccceeEEEEEecCCeEEEEEEE
Confidence 78999877542 24699999999999999999 8888888653 211111000 0 000 00
Q ss_pred CCCCeeEEeccccccccC--CCCc-----e-ehhhhhhhHHHHHHHHH----hhcCCcEEEecCCcccccc-h-hhh--c
Q 016535 97 LHPPKVVHLYRRKWIEES--TYPR-----F-TMIGQSFGSVYLSWEAL----CKFTPLYYFDTSGYAFTYP-L-ARI--F 160 (388)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~--~~~~-----~-~~~~~~~~~~~~~~~~l----~~~~~Div~~~~~~~~~~~-~-~~~--~ 160 (388)
..++.++.++...+..+. .+.. + ..............+++ ++.+||+||.+.......+ + .+. .
T Consensus 75 ~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~ 154 (485)
T 1rzu_A 75 HERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETP 154 (485)
T ss_dssp ETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSC
T ss_pred ecCceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcccC
Confidence 133444444322111110 1100 0 00000000111112222 3668999987653222222 2 233 7
Q ss_pred CCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHH-
Q 016535 161 GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL- 239 (388)
Q Consensus 161 ~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~- 239 (388)
++|+++++|............... ..+.. ..+.. ... ..+. ..++++..++.+|.++++|+..++.+.+.
T Consensus 155 ~~p~v~t~H~~~~~~~~~~~~~~~-~~~~~-~~~~~----~~~-~~~~--~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~ 225 (485)
T 1rzu_A 155 EIPSLLTIHNIAFQGQFGANIFSK-LALPA-HAFGM----EGI-EYYN--DVSFLKGGLQTATALSTVSPSYAEEILTAE 225 (485)
T ss_dssp CCCEEEEESCTTCCCEECGGGGGG-SCCCG-GGSST----TTT-EETT--EEEHHHHHHHHCSEEEESCHHHHHHTTSHH
T ss_pred CCCEEEEecCccccCCCCHHHHhh-cCCCh-hhccc----ccc-cccc--cccHHHHHHhhcCEEEecCHhHHHHHhccc
Confidence 899999999743210000000000 00000 00000 000 0000 01135666788999999999999998764
Q ss_pred hC---------CCCceEEEcCCCCCCCCccCCCC--------------------------CCC-CCcEEEEEcccCCCCC
Q 016535 240 WG---------IPDRIKRVYPPCDTSGLQVLPLE--------------------------RST-EYPAIISVAQFRPEKA 283 (388)
Q Consensus 240 ~~---------~~~~~~vi~ngvd~~~~~~~~~~--------------------------~~~-~~~~il~vgrl~~~Kg 283 (388)
++ ...++.++|||+|.+.+.+.... ... +..+++|+||+.++||
T Consensus 226 ~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg 305 (485)
T 1rzu_A 226 FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKG 305 (485)
T ss_dssp HHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTT
T ss_pred cCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccC
Confidence 32 24689999999998877653211 011 2468999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE-EccCCCHHHHHHHHHhCcEEEEc
Q 016535 284 HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRDLVKLLGGAVVGIHS 362 (388)
Q Consensus 284 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~-~~g~v~~~~l~~~~~~adv~v~p 362 (388)
++.+++|++.+.+. +++|+++|+| +.++.+.+++++++++ ++|. |.|. +++++.++|+.||++|+|
T Consensus 306 ~~~li~a~~~l~~~------~~~l~ivG~g----~~~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~p 372 (485)
T 1rzu_A 306 IDLMAEAVDEIVSL------GGRLVVLGAG----DVALEGALLAAASRHH--GRVGVAIGY-NEPLSHLMQAGCDAIIIP 372 (485)
T ss_dssp HHHHHTTHHHHHHT------TCEEEEEECB----CHHHHHHHHHHHHHTT--TTEEEEESC-CHHHHHHHHHHCSEEEEC
T ss_pred HHHHHHHHHHHHhc------CceEEEEeCC----chHHHHHHHHHHHhCC--CcEEEecCC-CHHHHHHHHhcCCEEEEC
Confidence 99999999999653 8999999987 4445678899998875 6897 6787 788889999999999999
Q ss_pred CCCCCCChHHHHHHHhCCceEeeCC
Q 016535 363 MIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 363 s~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
|.+|+||++++|||+||+|||+++.
T Consensus 373 S~~E~~~~~~lEAma~G~PvI~s~~ 397 (485)
T 1rzu_A 373 SRFEPCGLTQLYALRYGCIPVVART 397 (485)
T ss_dssp CSCCSSCSHHHHHHHHTCEEEEESS
T ss_pred cccCCCCHHHHHHHHCCCCEEEeCC
Confidence 9999999999999999999999985
No 13
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=8.6e-31 Score=254.16 Aligned_cols=325 Identities=15% Similarity=0.061 Sum_probs=203.9
Q ss_pred ceEEEeccccC---CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhh--------hc--eec----C
Q 016535 35 TSVAFFHPNTN---DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDR--------FG--VEL----L 97 (388)
Q Consensus 35 ~~I~~~~p~~~---~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~--------~~--i~~----~ 97 (388)
|||+++.+... ..||+++++.+++++|.++| |+|++++... .......... ++ ..+ .
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG--VDARVLLPAF----PDIRRGVTDAQVVSRRDTFAGHITLLFGHY 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT--CEEEEEEECC----HHHHHHCTTCEEEEEECCTTCCEEEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC--CEEEEEecCc----cccccccccceeEEEecccCCcEEEEEEEE
Confidence 78999877542 24699999999999999999 8888888753 2111111000 00 001 1
Q ss_pred CCCeeEEeccccccccC--CCCc-----e-ehhhhhhhHHHHHHHHHh----hcCCcEEEecCCcccccc--hh-hhcCC
Q 016535 98 HPPKVVHLYRRKWIEES--TYPR-----F-TMIGQSFGSVYLSWEALC----KFTPLYYFDTSGYAFTYP--LA-RIFGC 162 (388)
Q Consensus 98 ~~~~~~~~~~~~~~~~~--~~~~-----~-~~~~~~~~~~~~~~~~l~----~~~~Div~~~~~~~~~~~--~~-~~~~~ 162 (388)
+++.++++....+..+. .+.. + ..............++++ +.+||+||.+.......+ ++ +..++
T Consensus 75 ~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~~ 154 (485)
T 2qzs_A 75 NGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPA 154 (485)
T ss_dssp TTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCSS
T ss_pred CCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCCC
Confidence 34444444321111111 0100 0 000000001111223333 268999987764332223 23 45689
Q ss_pred eEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHH-hC
Q 016535 163 RVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-WG 241 (388)
Q Consensus 163 ~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~-~~ 241 (388)
|+++++|............... ..... ..+.. ... ..+. ..++++..++.+|.++++|+..++.+.+. ++
T Consensus 155 p~v~t~H~~~~~~~~~~~~~~~-~~~~~-~~~~~----~~~-~~~~--~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~ 225 (485)
T 2qzs_A 155 KSVFTVHNLAYQGMFYAHHMND-IQLPW-SFFNI----HGL-EFNG--QISFLKAGLYYADHITAVSPTYAREITEPQFA 225 (485)
T ss_dssp EEEEEESCTTCCCEEEGGGGGT-TTCCG-GGCST----TTT-EETT--EEEHHHHHHHHCSEEEESSHHHHHHTTSHHHH
T ss_pred CEEEEecCccccCCCCHHHHHh-cCCCc-hhccc----ccc-cccc--cccHHHHHHHhcCeEEecCHHHHHHHhccccC
Confidence 9999999743211000000000 00000 00000 000 0000 01235666778999999999999998764 33
Q ss_pred C---------C--CceEEEcCCCCCCCCccCCCC----------------------------CCCCCcEEEEEcccCCCC
Q 016535 242 I---------P--DRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAIISVAQFRPEK 282 (388)
Q Consensus 242 ~---------~--~~~~vi~ngvd~~~~~~~~~~----------------------------~~~~~~~il~vgrl~~~K 282 (388)
. . .++.++|||+|.+.+.+.... ...+..+++++||+.++|
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~K 305 (485)
T 2qzs_A 226 YGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQK 305 (485)
T ss_dssp TTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGG
T ss_pred cchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCcccc
Confidence 1 1 689999999998877653211 001558999999999999
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE-EccCCCHHHHHHHHHhCcEEEE
Q 016535 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRDLVKLLGGAVVGIH 361 (388)
Q Consensus 283 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~-~~g~v~~~~l~~~~~~adv~v~ 361 (388)
|++.+++|++.+.+. +++|+++|.| +.++.+.+++++++++ ++|. |.|. +++++.++|+.||++|+
T Consensus 306 g~~~li~a~~~l~~~------~~~l~ivG~g----~~~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~ 372 (485)
T 2qzs_A 306 GLDLVLEALPGLLEQ------GGQLALLGAG----DPVLQEGFLAAAAEYP--GQVGVQIGY-HEAFSHRIMGGADVILV 372 (485)
T ss_dssp CHHHHHHHHHHHHHT------TCEEEEEEEE----CHHHHHHHHHHHHHST--TTEEEEESC-CHHHHHHHHHHCSEEEE
T ss_pred CHHHHHHHHHHHhhC------CcEEEEEeCC----chHHHHHHHHHHHhCC--CcEEEeCCC-CHHHHHHHHHhCCEEEE
Confidence 999999999999653 8999999986 3356678999999886 6886 7887 78888999999999999
Q ss_pred cCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 362 SMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 362 ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
||.+|+||++++|||+||+|||+++.
T Consensus 373 pS~~E~~g~~~lEAma~G~PvI~s~~ 398 (485)
T 2qzs_A 373 PSRFEPCGLTQLYGLKYGTLPLVRRT 398 (485)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESS
T ss_pred CCccCCCcHHHHHHHHCCCCEEECCC
Confidence 99999999999999999999999985
No 14
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.98 E-value=3.9e-30 Score=250.72 Aligned_cols=163 Identities=13% Similarity=0.033 Sum_probs=136.9
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCC---------CCceEEEcCCCCCCCCccCCCC--------------------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGI---------PDRIKRVYPPCDTSGLQVLPLE-------------------- 264 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~---------~~~~~vi~ngvd~~~~~~~~~~-------------------- 264 (388)
+.+..+..||.|+++|++.++++.+.++. ..++.+|+||+|.+.+.+....
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~ 313 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKE 313 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHH
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHH
Confidence 46777788999999999999998765432 3579999999999887653210
Q ss_pred ---------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC
Q 016535 265 ---------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD 335 (388)
Q Consensus 265 ---------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~ 335 (388)
..++.+.|+++||+.++||++.+++|++++.++ +.+++++|.| +.++...+++...+++
T Consensus 314 ~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~------~~~l~l~G~G----~~~~~~~~~~~~~~~~-- 381 (536)
T 3vue_A 314 ALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE------DVQIVLLGTG----KKKFEKLLKSMEEKYP-- 381 (536)
T ss_dssp HHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS------SCEEEEECCB----CHHHHHHHHHHHHHST--
T ss_pred HHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh------CCeEEEEecc----CchHHHHHHHHHhhcC--
Confidence 113457999999999999999999999999654 7899999988 5555667777766654
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++.+.+..+.+++..+|+.||++|+||.+|+||++++|||+||+|||+++.+
T Consensus 382 ~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g 434 (536)
T 3vue_A 382 GKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTG 434 (536)
T ss_dssp TTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCT
T ss_pred CceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCC
Confidence 67999999999999999999999999999999999999999999999999874
No 15
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.97 E-value=1.6e-29 Score=239.25 Aligned_cols=287 Identities=14% Similarity=0.097 Sum_probs=184.0
Q ss_pred ccCccceEEEeccccCCC--CChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecc
Q 016535 30 RRNRTTSVAFFHPNTNDG--GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR 107 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~~~g--GG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 107 (388)
..+++|||+++.|....+ .|+++.+.+++++|.++| |+|++++..... +. +.. .. +. ......+..
T Consensus 42 ~~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G--heV~Vvt~~~~~--~~--~~~-~~----~~-~~~~~~~~~ 109 (413)
T 2x0d_A 42 SSIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK--FKKRIILTDATP--NP--KDL-QS----FK-SFKYVMPEE 109 (413)
T ss_dssp CCCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT--CEEEEEESSCCC--CH--HHH-GG----GT-TSEECCTTC
T ss_pred CCCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC--CceEEEEecCCC--Ch--HHH-Hh----hh-ccceeeccC
Confidence 356889999999887654 266677899999999999 889999876421 11 111 10 10 000000000
Q ss_pred ccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhh----------cCCeEEEEEeccccchhh
Q 016535 108 RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARI----------FGCRVICYTHYPTISLDM 177 (388)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~----------~~~~~i~~~h~p~~~~~~ 177 (388)
.... ..+...+...+. ..+...++|++|.+.... ....... .+.+.+.++|.... ..
T Consensus 110 ~~~~----~~~i~~~~~~~~------~~~~~~~~Dvv~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~ 176 (413)
T 2x0d_A 110 DKDF----ALQIVPFNDRYN------RTIPVAKHDIFIATAWWT-AYAAQRIVSWQSDTYGIPPNKILYIIQDFEP--GF 176 (413)
T ss_dssp CCCC----SEEEEECSCCTT------CCEEECTTEEEEECSHHH-HHHHHHHHHHHHHHHTCCCCCEEEEECSCGG--GG
T ss_pred Cccc----cceeeecccccc------ccccCCCCCEEEEehHHH-HHHHHHhhhhhhhhcccccCcEEEEEeechh--hc
Confidence 0000 000000000000 001123699998775321 1111112 24566666654210 00
Q ss_pred hhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCC--EEEECChhHHHHHHHHhCCCCceEEEcCCCCC
Q 016535 178 ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDT 255 (388)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~--~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~ 255 (388)
.... . ...+.+..++.++ .++++|+++++.+.+..-...++.+++||+|.
T Consensus 177 ----------------------~~~~--~----~~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~ 228 (413)
T 2x0d_A 177 ----------------------YQWS--S----QYVLAESTYKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINT 228 (413)
T ss_dssp ----------------------SCSS--H----HHHHHHHTTSCCSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCH
T ss_pred ----------------------CccC--h----HHHHHHHHhccCCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCc
Confidence 0000 0 0123455566555 58999999999998762212568899999986
Q ss_pred CCCccCCCCCCCCCcEEEEEccc-CCCCChHHHHHHHHHHHHHhcCCCCC---cEEEEEeCCCCCccHHHHHHHHHHHHh
Q 016535 256 SGLQVLPLERSTEYPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPR---PRLQFVGSCRNKSDEERLQSLKDKSIE 331 (388)
Q Consensus 256 ~~~~~~~~~~~~~~~~il~vgrl-~~~Kg~~~ll~a~~~l~~~~~~~~~~---~~l~ivG~~~~~~~~~~~~~l~~~~~~ 331 (388)
+.+.+... ...++..++++||+ .+.||++.+++|++.+.++. |+ ++|+++|+++.. ++
T Consensus 229 ~~~~~~~~-~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~----~~~~~~~l~ivG~~~~~-------------~~ 290 (413)
T 2x0d_A 229 TLKNYIND-KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKY----DRSNEWKIISVGEKHKD-------------IA 290 (413)
T ss_dssp HHHTTTTS-CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHC----TTGGGCEEEEEESCCCC-------------EE
T ss_pred hhhccccc-ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhC----CCCCceEEEEEcCCchh-------------hh
Confidence 64433211 12344678899997 58899999999999998775 54 899999987543 24
Q ss_pred cCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 332 ~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.++|+|+|.++.+|+.++|+.||++|+||..|+||++++||||||+|||+++.
T Consensus 291 l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~~ 346 (413)
T 2x0d_A 291 LGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNKY 346 (413)
T ss_dssp EETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEECB
T ss_pred cCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeCC
Confidence 56668999999999999999999999999999999999999999999999999653
No 16
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.95 E-value=6.2e-28 Score=228.42 Aligned_cols=191 Identities=14% Similarity=0.084 Sum_probs=145.3
Q ss_pred CCcEEEecCCccccc-chhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHH
Q 016535 140 TPLYYFDTSGYAFTY-PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLV 218 (388)
Q Consensus 140 ~~Div~~~~~~~~~~-~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (388)
++|+||...+....+ .+++..++|.+++.|..+..... . ......++++..
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-----------------------~-----~~~~~~~~~~~~ 175 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTI-----------------------N-----VASYIEREFDRV 175 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHHCTTSEEEEEESSCHHHH-----------------------T-----CCHHHHHHHHHH
T ss_pred CCCEEEECCchHHHHHHHHHHhCCCEEEEEeccchhhcc-----------------------c-----ccHHHHHHHHHH
Confidence 689888444422211 24556789999988864320000 0 011223457788
Q ss_pred hccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHh
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKL 298 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~ 298 (388)
++.+|.++++|+..++.+.+.+ ++.++|||+|.+.|.+.......+...++|+||+.++||+ ++.+.++.
T Consensus 176 ~~~ad~vi~~S~~~~~~~~~~~----~i~vipngvd~~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~ 245 (406)
T 2hy7_A 176 APTLDVIALVSPAMAAEVVSRD----NVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEF------FVVASKAF 245 (406)
T ss_dssp GGGCSEEEESCGGGGGGCSCST----TEEECCCCBCTTHHHHHCSCSCCSSEEEEEECCTTBCHHH------HHHHHHHC
T ss_pred HHhCCEEEEcCHHHHHHHHhcC----CEEEEcCCcChHhcCcccccccCCCcEEEEEeccccccCH------HHHHHHhC
Confidence 8999999999999998876542 8999999999887754332222233789999999999999 34444443
Q ss_pred cCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHH--
Q 016535 299 DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYM-- 376 (388)
Q Consensus 299 ~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAm-- 376 (388)
++++|+++|+|+ ++++++.++|+|+|+++++++.++|++||++|+||..|+||++++|||
T Consensus 246 ----~~~~l~ivG~g~--------------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~K 307 (406)
T 2hy7_A 246 ----PQVTFHVIGSGM--------------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMK 307 (406)
T ss_dssp ----TTEEEEEESCSS--------------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHH
T ss_pred ----CCeEEEEEeCch--------------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHH
Confidence 799999999763 556678889999999999999999999999999999999999999999
Q ss_pred -----HhCCceEeeC
Q 016535 377 -----AAGAIPIGKH 386 (388)
Q Consensus 377 -----a~G~PVI~~~ 386 (388)
|||+|||+||
T Consensus 308 l~eYla~G~PVIas~ 322 (406)
T 2hy7_A 308 LLQYDFFGLPAVCPN 322 (406)
T ss_dssp HHHHHHHTCCEEEEG
T ss_pred HHHHhhCCCcEEEeh
Confidence 9999999997
No 17
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.93 E-value=3.4e-25 Score=218.93 Aligned_cols=267 Identities=11% Similarity=0.044 Sum_probs=181.2
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHH--HhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccc
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKA--IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~--L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 108 (388)
++++|||+++.+....+ |+++++.++++. +.+.| ++|++++.... ..+....+.... . .+..+.
T Consensus 202 ~~~~~rI~~~~~~~~~~-g~~~~~~~l~~~L~~~~~~--~~v~~~~~~~~-~~~~~~~~~~~~-~-------~~~~~~-- 267 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAH-PTGLLTVALFEALQRRQPD--LQMHLFATSGD-DGSTLRTRLAQA-S-------TLHDVT-- 267 (568)
T ss_dssp SSSCEEEEEEESCSSSS-HHHHHHHHHHHHHHHHCTT--EEEEEEESSCC-CSCHHHHHHHHT-S-------EEEECT--
T ss_pred CCCCeEEEEECcccccC-hHHHHHHHHHhhccCCccc--EEEEEEECCCC-CccHHHHHHHhc-C-------eEEECC--
Confidence 46889999999988766 899999999999 78888 89999986531 112222222211 1 111110
Q ss_pred cccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccc--cchhhhcCCeEEEEEeccccchhhhhhhhcCCc
Q 016535 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFT--YPLARIFGCRVICYTHYPTISLDMISRVREGSS 186 (388)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~--~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~ 186 (388)
. +. .....+.+++.+||+||...++... ......+..|+++..|.......
T Consensus 268 ------~---~~--------~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 320 (568)
T 2vsy_A 268 ------A---LG--------HLATAKHIRHHGIDLLFDLRGWGGGGRPEVFALRPAPVQVNWLAYPGTSG---------- 320 (568)
T ss_dssp ------T---CC--------HHHHHHHHHHTTCSEEEECSSCTTCSSCHHHHTCCSSEEEEESSSSSCCC----------
T ss_pred ------C---CC--------HHHHHHHHHhCCCCEEEECCCCCCcchHHHHhcCCCceeEeeecCCcccC----------
Confidence 0 00 1123345677899999876553322 12222344566665553110000
Q ss_pred cccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCcc----CC
Q 016535 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV----LP 262 (388)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~----~~ 262 (388)
... ..+..+|.++++|+..++ +. +++.++||..+.....+ .+
T Consensus 321 -------------~~~--------------~~~~~~d~~i~~s~~~~~-----~~--~~i~~ipn~~~~~~~~~~~~~~~ 366 (568)
T 2vsy_A 321 -------------APW--------------MDYVLGDAFALPPALEPF-----YS--EHVLRLQGAFQPSDTSRVVAEPP 366 (568)
T ss_dssp -------------CTT--------------CCEEEECTTTSCTTTGGG-----CS--SEEEECSSCSCCCCTTCCCCCCC
T ss_pred -------------CCC--------------ceEEEECCCcCCcccccC-----Cc--ceeEcCCCcCCCCCCCCCCCCCC
Confidence 000 001236777888876543 33 58889999654332110 01
Q ss_pred CCC---CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEe-CCCCCccHHHHHHHHHHHHhcCCC-Cc
Q 016535 263 LER---STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG-SCRNKSDEERLQSLKDKSIELKVD-GN 337 (388)
Q Consensus 263 ~~~---~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-~~~~~~~~~~~~~l~~~~~~~~l~-~~ 337 (388)
... .++...++++||+.+ ||++.+++|+..+.++. |+++|+++| +|+ ..+++++.++++++. ++
T Consensus 367 ~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~----~~~~l~i~G~~g~------~~~~l~~~~~~~~l~~~~ 435 (568)
T 2vsy_A 367 SRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREV----PDSVLWLLSGPGE------ADARLRAFAHAQGVDAQR 435 (568)
T ss_dssp CTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHC----TTCEEEEECCSTT------HHHHHHHHHHHTTCCGGG
T ss_pred CccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhC----CCcEEEEecCCHH------HHHHHHHHHHHcCCChhH
Confidence 100 022345779999999 99999999999998875 899999999 443 345899999999998 99
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
|+|+|+++++++.++|+.||++|+||.+ +||++++|||+||+|||+
T Consensus 436 v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~ 481 (568)
T 2vsy_A 436 LVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLT 481 (568)
T ss_dssp EEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEB
T ss_pred EEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEe
Confidence 9999999999999999999999999999 999999999999999999
No 18
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.92 E-value=1.1e-24 Score=203.10 Aligned_cols=269 Identities=11% Similarity=0.013 Sum_probs=174.8
Q ss_pred cceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccccc
Q 016535 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (388)
.|||+++.... ||.++.+.+++++|.++| |+|++++..... . .... ...++ .+..+....+...
T Consensus 6 ~mkIl~~~~~~---gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~--~--~~~~-~~~g~------~~~~~~~~~~~~~ 69 (364)
T 1f0k_A 6 GKRLMVMAGGT---GGHVFPGLAVAHHLMAQG--WQVRWLGTADRM--E--ADLV-PKHGI------EIDFIRISGLRGK 69 (364)
T ss_dssp -CEEEEECCSS---HHHHHHHHHHHHHHHTTT--CEEEEEECTTST--H--HHHG-GGGTC------EEEECCCCCCTTC
T ss_pred CcEEEEEeCCC---ccchhHHHHHHHHHHHcC--CEEEEEecCCcc--h--hhhc-cccCC------ceEEecCCccCcC
Confidence 48999997433 589999999999999999 888888876411 1 1111 11122 2222221110000
Q ss_pred CCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCccccc--chhhhcCCeEEEEEeccccchhhhhhhhcCCccccCC
Q 016535 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY--PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (388)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~--~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (388)
..+..+......+.......+.+.+.+||+||.+..+.... ..++..++|.+++.|....
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~------------------ 131 (364)
T 1f0k_A 70 GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIA------------------ 131 (364)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSC------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCC------------------
Confidence 00000011111222233344567778999998876542221 1445778999887774210
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC----CCCC
Q 016535 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----ERST 267 (388)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~----~~~~ 267 (388)
. +..++..+.+|.+++.|+.. ++ ++.+++||+|.+.+.+... ....
T Consensus 132 ---------~-----------~~~~~~~~~~d~v~~~~~~~-------~~---~~~~i~n~v~~~~~~~~~~~~~~~~~~ 181 (364)
T 1f0k_A 132 ---------G-----------LTNKWLAKIATKVMQAFPGA-------FP---NAEVVGNPVRTDVLALPLPQQRLAGRE 181 (364)
T ss_dssp ---------C-----------HHHHHHTTTCSEEEESSTTS-------SS---SCEECCCCCCHHHHTSCCHHHHHTTCC
T ss_pred ---------c-----------HHHHHHHHhCCEEEecChhh-------cC---CceEeCCccchhhcccchhhhhcccCC
Confidence 0 01344567799999988764 22 5778999998655432110 0112
Q ss_pred CCc-EEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcE-EEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 268 EYP-AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR-LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 268 ~~~-~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~-l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
+.. .+++.|++.+.||.+.+++|++.+.+ +++ ++++|.++ .+++++.+++++++ +|+|+|++
T Consensus 182 ~~~~il~~~g~~~~~k~~~~li~a~~~l~~-------~~~~l~i~G~~~-------~~~l~~~~~~~~~~-~v~~~g~~- 245 (364)
T 1f0k_A 182 GPVRVLVVGGSQGARILNQTMPQVAAKLGD-------SVTIWHQSGKGS-------QQSVEQAYAEAGQP-QHKVTEFI- 245 (364)
T ss_dssp SSEEEEEECTTTCCHHHHHHHHHHHHHHGG-------GEEEEEECCTTC-------HHHHHHHHHHTTCT-TSEEESCC-
T ss_pred CCcEEEEEcCchHhHHHHHHHHHHHHHhcC-------CcEEEEEcCCch-------HHHHHHHHhhcCCC-ceEEecch-
Confidence 333 55666799999999999999998832 467 56778663 14788888888874 89999999
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.++|+.||++|+||- |++++|||+||+|||+++.
T Consensus 246 -~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~ 282 (364)
T 1f0k_A 246 -DDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPF 282 (364)
T ss_dssp -SCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCC
T ss_pred -hhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeC
Confidence 889999999999999983 8999999999999999985
No 19
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.89 E-value=4.9e-22 Score=185.87 Aligned_cols=151 Identities=12% Similarity=0.035 Sum_probs=113.2
Q ss_pred hccCCEEEECChhHHHHHHHHhCC-CCceEEEcCC-CCCCCCccCCCC-------CCCCCcEEEEEcccCCC-CChHHHH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP-CDTSGLQVLPLE-------RSTEYPAIISVAQFRPE-KAHPLQL 288 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ng-vd~~~~~~~~~~-------~~~~~~~il~vgrl~~~-Kg~~~ll 288 (388)
.+.+|.+++.|+..++.+.+. +. +.++.+++|| +|...+.+.... ...++..++++||+.+. ||++.++
T Consensus 148 ~~~~d~ii~~s~~~~~~~~~~-g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li 226 (375)
T 3beo_A 148 GVMADLHFSPTAKSATNLQKE-NKDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGEPMRNMF 226 (375)
T ss_dssp HHHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTHHHHHHH
T ss_pred hhhhheeeCCCHHHHHHHHHc-CCCcccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchhHHHHHH
Confidence 345999999999999999775 43 4679999999 675433221100 01234567899999875 9999999
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCC
Q 016535 289 EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHF 368 (388)
Q Consensus 289 ~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~ 368 (388)
+|++.+.++. |++++++ |.++ +.++.+.++++. +..++|+|+|.++..++.++|+.||++|+||
T Consensus 227 ~a~~~l~~~~----~~~~~i~-~~g~---~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s----- 290 (375)
T 3beo_A 227 RAIKRLVDKH----EDVQVVY-PVHM---NPVVRETANDIL---GDYGRIHLIEPLDVIDFHNVAARSYLMLTDS----- 290 (375)
T ss_dssp HHHHHHHHHC----TTEEEEE-ECCS---CHHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----
T ss_pred HHHHHHHhhC----CCeEEEE-eCCC---CHHHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----
Confidence 9999998875 7888655 5553 222333444432 2236899999999999999999999999999
Q ss_pred ChHHHHHHHhCCceEeeC
Q 016535 369 GISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 369 ~~~vlEAma~G~PVI~~~ 386 (388)
|.+++|||+||+|||+++
T Consensus 291 g~~~lEA~a~G~Pvi~~~ 308 (375)
T 3beo_A 291 GGVQEEAPSLGVPVLVLR 308 (375)
T ss_dssp HHHHHHHHHHTCCEEECS
T ss_pred CChHHHHHhcCCCEEEec
Confidence 677999999999999985
No 20
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.87 E-value=1.7e-21 Score=182.94 Aligned_cols=212 Identities=11% Similarity=-0.073 Sum_probs=141.3
Q ss_pred HHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhH
Q 016535 130 YLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (388)
Q Consensus 130 ~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (388)
....+.+++.+||+||.+......++ .++..++|++.+.|.... .. . + . . +
T Consensus 76 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~----~~-~------~--------~---~----~ 129 (384)
T 1vgv_A 76 EGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT----GD-L------Y--------S---P----W 129 (384)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC----SC-T------T--------S---S----T
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc----cc-c------c--------C---C----C
Confidence 33445677889999987643112222 345678898766553210 00 0 0 0 0 0
Q ss_pred HHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCC-CCCCCccC--------------CCC-C-CCC
Q 016535 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL--------------PLE-R-STE 268 (388)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngv-d~~~~~~~--------------~~~-~-~~~ 268 (388)
.... ...+..+.+|.+++.|+..++.+.+. +. +.++.+++||+ |...+.+. ... . ..+
T Consensus 130 ~~~~---~~~~~~~~~d~ii~~s~~~~~~l~~~-g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (384)
T 1vgv_A 130 PEEA---NRTLTGHLAMYHFSPTETSRQNLLRE-NVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDK 205 (384)
T ss_dssp THHH---HHHHHHTTCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTS
T ss_pred chHh---hHHHHHhhccEEEcCcHHHHHHHHHc-CCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCC
Confidence 0011 11223456999999999999999764 43 46789999995 42211110 000 1 123
Q ss_pred CcEEEEEcccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 269 YPAIISVAQFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 269 ~~~il~vgrl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+..++++||+.+. ||++.+++|++.+.++. |+++++++++. +.++.+.+++.++. .++|.|+|.++.+
T Consensus 206 ~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~----~~~~l~i~~g~----~~~~~~~l~~~~~~---~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 206 KMILVTGHRRESFGRGFEEICHALADIATTH----QDIQIVYPVHL----NPNVREPVNRILGH---VKNVILIDPQEYL 274 (384)
T ss_dssp EEEEEECCCBSSCCHHHHHHHHHHHHHHHHC----TTEEEEEECCB----CHHHHHHHHHHHTT---CTTEEEECCCCHH
T ss_pred CEEEEEeCCccccchHHHHHHHHHHHHHhhC----CCeEEEEEcCC----CHHHHHHHHHHhhc---CCCEEEeCCCCHH
Confidence 3578899999876 99999999999998875 78999886432 22344556655432 3689999999989
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
++.++|+.||++|+|| |.+++|||+||+|||+++.
T Consensus 275 ~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~ 309 (384)
T 1vgv_A 275 PFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRD 309 (384)
T ss_dssp HHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESS
T ss_pred HHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccC
Confidence 9999999999999999 4458999999999999974
No 21
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.87 E-value=2.6e-21 Score=186.86 Aligned_cols=244 Identities=14% Similarity=0.074 Sum_probs=155.1
Q ss_pred cCCcEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHH
Q 016535 139 FTPLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMY 215 (388)
Q Consensus 139 ~~~Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (388)
.+||++|++.+.....+ +.+ ..+++.++++|.......+.. ......|.....+ ..+. ...+.-++ ....++
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lag--qg~~~~y~~L~~~-~~d~-ea~~~~i~-~~~~~E 254 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCA--SGSFDFYNCLESV-DVDH-EAGRFGIY-HRYCIE 254 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTS--SSCSCHHHHGGGC-CHHH-HHHHTTCH-HHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhh--cCCCchhhhhhhc-CCCh-hhhhhchh-HHHHHH
Confidence 45899988876554444 333 457999999997542111100 0000000000000 0000 00000011 123468
Q ss_pred HHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC------------------------CCC-CCCc
Q 016535 216 GLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------------------------ERS-TEYP 270 (388)
Q Consensus 216 ~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~------------------------~~~-~~~~ 270 (388)
+.....||.++|+|+..+++++..++.+... +|+||+|.+.+.+... ... .+..
T Consensus 255 Kaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~-iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~l 333 (725)
T 3nb0_A 255 RAAAHSADVFTTVSQITAFEAEHLLKRKPDG-ILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTL 333 (725)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHHHTSSCCSE-ECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEE
T ss_pred HHHHHhCCEEEECCHHHHHHHHHHhcCCCCE-EEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCcee
Confidence 8888999999999999999999887665444 4999999988865300 111 2335
Q ss_pred EEEEEcccC-CCCChHHHHHHHHHHHHHhc---CCCCCcEEEEEeCCCCCcc----------------------------
Q 016535 271 AIISVAQFR-PEKAHPLQLEAFSVALRKLD---ADLPRPRLQFVGSCRNKSD---------------------------- 318 (388)
Q Consensus 271 ~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~---~~~~~~~l~ivG~~~~~~~---------------------------- 318 (388)
++..+||+. ..||+|.+++|+.++....+ .+..-+.|+++..+....+
T Consensus 334 iifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 413 (725)
T 3nb0_A 334 YFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRI 413 (725)
T ss_dssp EEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHH
Confidence 666689999 68999999999999976532 1123377777776632211
Q ss_pred -------------------H------------------------------------HHHHHHHHHHHhcCCCCc------
Q 016535 319 -------------------E------------------------------------ERLQSLKDKSIELKVDGN------ 337 (388)
Q Consensus 319 -------------------~------------------------------------~~~~~l~~~~~~~~l~~~------ 337 (388)
. +..+.+...++++++.++
T Consensus 414 ~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVK 493 (725)
T 3nb0_A 414 FDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVK 493 (725)
T ss_dssp HHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEE
T ss_pred HHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCcee
Confidence 0 011223334455565544
Q ss_pred EEEc-cCCCHH------HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 338 VEFY-KNLLYR------DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 338 V~~~-g~v~~~------~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|.|. ++++.+ ++.++|+.||++|+||.+|+||++++||||||+|||++|.+
T Consensus 494 VIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 494 MIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp EEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred EEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 4555 777765 58999999999999999999999999999999999999863
No 22
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.87 E-value=1.5e-20 Score=175.57 Aligned_cols=152 Identities=13% Similarity=0.050 Sum_probs=118.0
Q ss_pred HHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHH
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~ 293 (388)
.++.++.+|.+++.|+..++.+.+. +.+ ++.+++|+. +.... + ....+..++++.|+ ..||++.+++|++.
T Consensus 147 ~~~~~~~~d~ii~~S~~~~~~l~~~-g~~-ki~vi~n~~f~~~~~-~---~~~l~~~vi~~~~~--~~k~~~~ll~A~~~ 218 (374)
T 2xci_A 147 EKILSKKFDLIIMRTQEDVEKFKTF-GAK-RVFSCGNLKFICQKG-K---GIKLKGEFIVAGSI--HTGEVEIILKAFKE 218 (374)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHTT-TCC-SEEECCCGGGCCCCC-S---CCCCSSCEEEEEEE--CGGGHHHHHHHHHH
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCC-eEEEcCCCccCCCcC-h---hhhhcCCEEEEEeC--CCchHHHHHHHHHH
Confidence 5566788999999999999999875 545 899999973 21111 1 11111245666665 46899999999999
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC--------CcEEEccCCCHHHHHHHHHhCcEEEEcCC-
Q 016535 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD--------GNVEFYKNLLYRDLVKLLGGAVVGIHSMI- 364 (388)
Q Consensus 294 l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~--------~~V~~~g~v~~~~l~~~~~~adv~v~ps~- 364 (388)
+.++. |+++|+++|+++++ .++++++++++++. ++|.+.|.. +|+.++|+.||++++||.
T Consensus 219 l~~~~----p~~~lvivG~g~~~-----~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~ 287 (374)
T 2xci_A 219 IKKTY----SSLKLILVPRHIEN-----AKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTF 287 (374)
T ss_dssp HHTTC----TTCEEEEEESSGGG-----HHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSS
T ss_pred HHhhC----CCcEEEEECCCHHH-----HHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcc
Confidence 98775 89999999986543 23788888888886 578888876 899999999999888765
Q ss_pred CCCCChHHHHHHHhCCceEee
Q 016535 365 DEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 365 ~E~~~~~vlEAma~G~PVI~~ 385 (388)
.|++|++++||||||+|||++
T Consensus 288 ~e~gg~~~lEAmA~G~PVI~~ 308 (374)
T 2xci_A 288 VNIGGHNLLEPTCWGIPVIYG 308 (374)
T ss_dssp SSSCCCCCHHHHTTTCCEEEC
T ss_pred cCCCCcCHHHHHHhCCCEEEC
Confidence 477899999999999999974
No 23
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.87 E-value=1.2e-21 Score=166.91 Aligned_cols=128 Identities=22% Similarity=0.211 Sum_probs=107.8
Q ss_pred EcCCCCCCCCc--cCCC-----CC-------CCCCcEEEEEcccC-CCCChHHHHHHHHHHH--HHhcCCCCCcEEEEEe
Q 016535 249 VYPPCDTSGLQ--VLPL-----ER-------STEYPAIISVAQFR-PEKAHPLQLEAFSVAL--RKLDADLPRPRLQFVG 311 (388)
Q Consensus 249 i~ngvd~~~~~--~~~~-----~~-------~~~~~~il~vgrl~-~~Kg~~~ll~a~~~l~--~~~~~~~~~~~l~ivG 311 (388)
||||+|.+.|. +... .. ..+..+++|+|++. +.||++.+++|++.+. ++. ++++|+++|
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~----~~~~l~i~G 77 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF----QEMRFIIIG 77 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG----GGEEEEEEC
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccC----CCeEEEEEC
Confidence 79999999887 5431 00 02446899999999 9999999999999996 554 799999999
Q ss_pred CCCCCccHHHHHHHHHHHHhcCCCCcEEE-ccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 312 SCRNKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~l~~~V~~-~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.+ +.++.+.+++.+++++ +|+| +|+++++++.++|+.||++|+||..|++|++++|||+||+|||+++.
T Consensus 78 ~~----~~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 147 (200)
T 2bfw_A 78 KG----DPELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV 147 (200)
T ss_dssp CB----CHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC
T ss_pred CC----ChHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCC
Confidence 86 3335668888888886 8999 99999999999999999999999999999999999999999999985
No 24
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.87 E-value=3.6e-21 Score=184.56 Aligned_cols=145 Identities=14% Similarity=0.148 Sum_probs=108.6
Q ss_pred CCceEEEcCCCCCCCCccCCCC--C---------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 016535 243 PDRIKRVYPPCDTSGLQVLPLE--R---------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG 311 (388)
Q Consensus 243 ~~~~~vi~ngvd~~~~~~~~~~--~---------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG 311 (388)
..++.++|||+|++.|.+.... . -.++.+|+++||+++.||++.+++|++.+.++++....+++|+++|
T Consensus 218 ~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG 297 (482)
T 1uqt_A 218 AFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIA 297 (482)
T ss_dssp EEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEEC
T ss_pred EEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEE
Confidence 3578899999998766432100 0 0245889999999999999999999999988863222358899999
Q ss_pred CCCCCccH---HHHHHHHHHHHhcC----CC--CcEE-EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCC-
Q 016535 312 SCRNKSDE---ERLQSLKDKSIELK----VD--GNVE-FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA- 380 (388)
Q Consensus 312 ~~~~~~~~---~~~~~l~~~~~~~~----l~--~~V~-~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~- 380 (388)
.+...+.. ++.+++++++++++ .. ..|. +.|.++++++.++|+.||++|+||..||||++++||||||+
T Consensus 298 ~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~ 377 (482)
T 1uqt_A 298 PTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP 377 (482)
T ss_dssp CBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC
Confidence 74322111 23455555555432 11 1366 57999999999999999999999999999999999999997
Q ss_pred ----ceEeeCC
Q 016535 381 ----IPIGKHF 387 (388)
Q Consensus 381 ----PVI~~~~ 387 (388)
|+|+|+.
T Consensus 378 ~~~gpvV~S~~ 388 (482)
T 1uqt_A 378 ANPGVLVLSQF 388 (482)
T ss_dssp TSCCEEEEETT
T ss_pred CCCCCEEEECC
Confidence 8999874
No 25
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.86 E-value=6.6e-20 Score=174.00 Aligned_cols=218 Identities=13% Similarity=-0.010 Sum_probs=150.2
Q ss_pred CcEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHH
Q 016535 141 PLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL 217 (388)
Q Consensus 141 ~Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (388)
.|+|+.+.-+...+| +.+ ....++.+++|.|....+.+..+.. ..++ -...
T Consensus 150 ~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~----------------------~~r~----ell~ 203 (496)
T 3t5t_A 150 DPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK----------------------EIRT----GILH 203 (496)
T ss_dssp SCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCH----------------------HHHH----HHHH
T ss_pred CCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcH----------------------hHHH----HHHH
Confidence 467755544444445 433 3578999999998866655432110 0001 1223
Q ss_pred HhccCCEEEECChhHHHHHHH----Hh-CC--------------CCceEEEcCCCCCCCCccCCCC--CC-----CCCcE
Q 016535 218 VGSCADLAMVNSSWTQSHIEK----LW-GI--------------PDRIKRVYPPCDTSGLQVLPLE--RS-----TEYPA 271 (388)
Q Consensus 218 ~~~~a~~ii~~S~~~~~~l~~----~~-~~--------------~~~~~vi~ngvd~~~~~~~~~~--~~-----~~~~~ 271 (388)
.+-.+|.|...++.-.+.|.+ .. +. ..++.++|+|+|++.|.+.... .. .++.+
T Consensus 204 gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~~~~l 283 (496)
T 3t5t_A 204 GMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHRL 283 (496)
T ss_dssp HHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHTTSEE
T ss_pred HHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhCCceE
Confidence 346789999999888777543 22 21 2367889999999888654321 11 35688
Q ss_pred EEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCcc---HHHHHHHHHHHHhc----CCCCcEEEccCC
Q 016535 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD---EERLQSLKDKSIEL----KVDGNVEFYKNL 344 (388)
Q Consensus 272 il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~---~~~~~~l~~~~~~~----~l~~~V~~~g~v 344 (388)
|+++||+++.||++.+|+|+ ++.++++... ++.|+++|.....+. .++.+++++++.+. +.. .|.|+|.+
T Consensus 284 Il~VgRLd~~KGi~~lL~Af-~ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~v 360 (496)
T 3t5t_A 284 VVHSGRTDPIKNAERAVRAF-VLAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDNDN 360 (496)
T ss_dssp EEEEEESSGGGCHHHHHHHH-HHHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEECC
T ss_pred EEEcccCccccCHHHHHHHH-HHHHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCCC
Confidence 99999999999999999999 8888874322 567888885322111 23345555555543 222 69999999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhC---CceEeeCC
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG---AIPIGKHF 387 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G---~PVI~~~~ 387 (388)
+.+++.++|+.||++|+||.+||||++++|||||| .|+|.|+.
T Consensus 361 ~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~ 406 (496)
T 3t5t_A 361 DVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSET 406 (496)
T ss_dssp CHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETT
T ss_pred CHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCC
Confidence 99999999999999999999999999999999996 88888864
No 26
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.85 E-value=2.9e-21 Score=159.38 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=94.3
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
++.++|+||+.+.||++.+++|++.+++. ++++|+++|.++.. +.++++++++++ ++.| |++++++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-----~~~~l~i~G~g~~~------~~~~~~~~~~~~--~v~~-g~~~~~~ 67 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYK-----QDIVLLLKGKGPDE------KKIKLLAQKLGV--KAEF-GFVNSNE 67 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTG-----GGEEEEEECCSTTH------HHHHHHHHHHTC--EEEC-CCCCHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccC-----CCeEEEEEeCCccH------HHHHHHHHHcCC--eEEE-eecCHHH
Confidence 47899999999999999999999998543 69999999987543 388888998887 7999 9999999
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHHHhCC-ceEeeC
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA-IPIGKH 386 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~-PVI~~~ 386 (388)
+.++|+.||++|+||..|+||++++|||+||+ |||+++
T Consensus 68 ~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~ 106 (166)
T 3qhp_A 68 LLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANS 106 (166)
T ss_dssp HHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeC
Confidence 99999999999999999999999999999998 999953
No 27
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.85 E-value=5.6e-21 Score=159.53 Aligned_cols=107 Identities=25% Similarity=0.261 Sum_probs=98.8
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHH--hcCCCCcEEEccCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI--ELKVDGNVEFYKNL 344 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~--~~~l~~~V~~~g~v 344 (388)
.++.+++|+|++.+.||++.+++|++.+ ++++|+++|.++..+ ++++.++ +++++++|+|+|++
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--------~~~~l~i~G~~~~~~------~l~~~~~~~~~~l~~~v~~~g~~ 86 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--------QDEKLYIVGWFSKGD------HAERYARKIMKIAPDNVKFLGSV 86 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--------TTSCEEEEBCCCTTS------THHHHHHHHHHHSCTTEEEEESC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--------CCcEEEEEecCccHH------HHHHHHHhhhcccCCcEEEeCCC
Confidence 4557899999999999999999999987 689999999987665 6788888 77888999999999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++++.++|+.||++|+||..|++|++++|||+||+|||+++.
T Consensus 87 ~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~ 129 (177)
T 2f9f_A 87 SEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE 129 (177)
T ss_dssp CHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS
T ss_pred CHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC
Confidence 9999999999999999999999999999999999999999985
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.84 E-value=1.5e-19 Score=169.15 Aligned_cols=152 Identities=13% Similarity=0.051 Sum_probs=112.2
Q ss_pred HHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCC-CCCCCccC--CC--CCCCCCcEEEEEcccCCCCChHHHHHH
Q 016535 217 LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL--PL--ERSTEYPAIISVAQFRPEKAHPLQLEA 290 (388)
Q Consensus 217 ~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngv-d~~~~~~~--~~--~~~~~~~~il~vgrl~~~Kg~~~ll~a 290 (388)
+..+.+|.+++.|+..++.+.+. +. +.++.+++|+. |...+... .. ....++..++++||+...||++.+++|
T Consensus 142 ~~~~~~~~~~~~s~~~~~~l~~~-g~~~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~k~~~~ll~a 220 (376)
T 1v4v_A 142 LTDVLTDLDFAPTPLAKANLLKE-GKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQA 220 (376)
T ss_dssp HHHHHCSEEEESSHHHHHHHHTT-TCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHH
T ss_pred HHHHHhceeeCCCHHHHHHHHHc-CCCcceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccchHHHHHHHHH
Confidence 34456899999999999999775 43 46788999975 42111100 00 001234667789999888899999999
Q ss_pred HHHHHHHhcCCCCCcEEEEE-eCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCC
Q 016535 291 FSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFG 369 (388)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~ 369 (388)
++.+.++. |+++++++ |.+ .+..+.++++++. .++|.|+|.++..++.++|+.||++|.|| | |
T Consensus 221 ~~~l~~~~----~~~~lv~~~g~~-----~~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~~v~~S--~--g 284 (376)
T 1v4v_A 221 LKRVAEAF----PHLTFVYPVHLN-----PVVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLLLVTDS--G--G 284 (376)
T ss_dssp HHHHHHHC----TTSEEEEECCSC-----HHHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEEEEESC--H--H
T ss_pred HHHHHhhC----CCeEEEEECCCC-----HHHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcEEEECC--c--C
Confidence 99998775 78998886 642 2334566666542 36899999998889999999999999999 3 3
Q ss_pred hHHHHHHHhCCceEeeC
Q 016535 370 ISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 370 ~~vlEAma~G~PVI~~~ 386 (388)
+ ++|||+||+|||+++
T Consensus 285 ~-~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 285 L-QEEGAALGVPVVVLR 300 (376)
T ss_dssp H-HHHHHHTTCCEEECS
T ss_pred H-HHHHHHcCCCEEecc
Confidence 3 889999999999864
No 29
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.71 E-value=1.8e-15 Score=138.36 Aligned_cols=139 Identities=12% Similarity=-0.068 Sum_probs=100.8
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCCC-CceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHH
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~-~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~ 292 (388)
.|++.++.||.+++.|+.+++.+.+. +.+ .++.++++. |... +.+.....+++.++|+|+++....+.. +
T Consensus 126 ~E~~~y~~aD~Ii~~S~~~~~~l~~~-G~~~~ki~~~~~~-~~~~--~~~~~~~~~~~~i~yaG~l~k~~~L~~----l- 196 (339)
T 3rhz_A 126 RTIAYYNKADVVVAPSQKMIDKLRDF-GMNVSKTVVQGMW-DHPT--QAPMFPAGLKREIHFPGNPERFSFVKE----W- 196 (339)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHHT-TCCCSEEEECCSC-CCCC--CCCCCCCEEEEEEEECSCTTTCGGGGG----C-
T ss_pred HHHHHHHHCCEEEECCHHHHHHHHHc-CCCcCceeecCCC-CccC--cccccccCCCcEEEEeCCcchhhHHHh----C-
Confidence 58999999999999999999999876 443 555444332 2211 111112233478999999995322221 1
Q ss_pred HHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC-------C
Q 016535 293 VALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI-------D 365 (388)
Q Consensus 293 ~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~-------~ 365 (388)
.++++|+++|+|++. .++ ||+|+|++|.++++++|+.+|+.+.+.. .
T Consensus 197 ---------~~~~~f~ivG~G~~~----------------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~ 250 (339)
T 3rhz_A 197 ---------KYDIPLKVYTWQNVE----------------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQS 250 (339)
T ss_dssp ---------CCSSCEEEEESCCCC----------------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHT
T ss_pred ---------CCCCeEEEEeCCccc----------------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHH
Confidence 168999999998643 144 8999999999999999998888777511 1
Q ss_pred CCCChHHHHHHHhCCceEeeCC
Q 016535 366 EHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 366 E~~~~~vlEAma~G~PVI~~~~ 387 (388)
...|..++||||||+|||+++.
T Consensus 251 ~~~P~Kl~eymA~G~PVI~~~~ 272 (339)
T 3rhz_A 251 LYCSYKLGSFLAAGIPVIVQEG 272 (339)
T ss_dssp TCCCHHHHHHHHHTCCEEEETT
T ss_pred hcChHHHHHHHHcCCCEEEccC
Confidence 2568999999999999999875
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.67 E-value=2e-15 Score=141.83 Aligned_cols=290 Identities=12% Similarity=0.029 Sum_probs=164.9
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEE-ecCCCCCchhHHHHhhhhhceecCCCCeeEEecccc
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVY-TGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 109 (388)
+++.|||+++.-.- -|.... ..++++|++.+ ++++.++ |+.+ .....+..+.+++... +.+....
T Consensus 22 ~~~m~ki~~v~Gtr---~~~~~~-a~li~~l~~~~-~~~~~~~~tG~h----~~~~~~~~~~~~i~~~-----~~l~~~~ 87 (396)
T 3dzc_A 22 SNAMKKVLIVFGTR---PEAIKM-APLVQQLCQDN-RFVAKVCVTGQH----REMLDQVLELFSITPD-----FDLNIME 87 (396)
T ss_dssp --CCEEEEEEECSH---HHHHHH-HHHHHHHHHCT-TEEEEEEECCSS----SHHHHHHHHHTTCCCS-----EECCCCC
T ss_pred hCCCCeEEEEEecc---HhHHHH-HHHHHHHHhCC-CCcEEEEEeccc----HHHHHHHHHhcCCCCc-----eeeecCC
Confidence 36668898875332 133333 56889998862 2777544 4433 1122222233444211 1111100
Q ss_pred ccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCc
Q 016535 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSS 186 (388)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~ 186 (388)
..-+......+......+.+.+.+||+|+........++ .++..++|++. ++.+...
T Consensus 88 -------~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs------------ 147 (396)
T 3dzc_A 88 -------PGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRT------------ 147 (396)
T ss_dssp -------TTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCC------------
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccc------------
Confidence 001111122233344455678889999877655443333 44577899653 3321100
Q ss_pred cccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccC----
Q 016535 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVL---- 261 (388)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~---- 261 (388)
+. +...+ .... ......+.+|.+++.|+..++.+.+.+-.+.++.+++|+. |...+...
T Consensus 148 -~~---------~~~~~---~~~~---~r~~~~~~a~~~~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~ 211 (396)
T 3dzc_A 148 -GN---------IYSPW---PEEG---NRKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHT 211 (396)
T ss_dssp -SC---------TTSST---THHH---HHHHHHHTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHH
T ss_pred -cc---------cccCC---cHHH---HHHHHHHhcCEEECCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhccc
Confidence 00 00000 0011 1112245689999999999999987533246788999864 42111110
Q ss_pred ----------CCC--CCCCCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHH
Q 016535 262 ----------PLE--RSTEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDK 328 (388)
Q Consensus 262 ----------~~~--~~~~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~ 328 (388)
... ...++..+++.+|.. ..|+++.+++|++.+.+++ |++++++.++. +....+.+++.
T Consensus 212 ~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~----~~~~~v~~~g~----~~~~~~~l~~~ 283 (396)
T 3dzc_A 212 DMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQH----PECQILYPVHL----NPNVREPVNKL 283 (396)
T ss_dssp CHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHC----TTEEEEEECCB----CHHHHHHHHHH
T ss_pred chhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhC----CCceEEEEeCC----ChHHHHHHHHH
Confidence 011 112234455666654 4588999999999998875 78999886321 22233344443
Q ss_pred HHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 329 SIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 329 ~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
. +..++|.+.++++..++..+|+.||++|.+| | |+. +|||++|+|+|+++
T Consensus 284 ~---~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~PvV~~~ 333 (396)
T 3dzc_A 284 L---KGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGKPVLVMR 333 (396)
T ss_dssp T---TTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTCCEEECC
T ss_pred H---cCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCCCEEEcc
Confidence 2 3446899999999889999999999999998 3 443 89999999999873
No 31
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.67 E-value=5.8e-15 Score=139.60 Aligned_cols=286 Identities=14% Similarity=0.015 Sum_probs=157.8
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecc---
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR--- 107 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--- 107 (388)
+.++|||+|+.+.. +|....+..++++|.++| |+|+++++.. . .+.....++++ ..+..
T Consensus 17 ~~~~MrIl~~~~~~---~Gh~~~~~~la~~L~~~G--heV~v~~~~~------~-~~~~~~~g~~~------~~~~~~~~ 78 (412)
T 3otg_A 17 EGRHMRVLFASLGT---HGHTYPLLPLATAARAAG--HEVTFATGEG------F-AGTLRKLGFEP------VATGMPVF 78 (412)
T ss_dssp -CCSCEEEEECCSS---HHHHGGGHHHHHHHHHTT--CEEEEEECGG------G-HHHHHHTTCEE------EECCCCHH
T ss_pred ccceeEEEEEcCCC---cccHHHHHHHHHHHHHCC--CEEEEEccHH------H-HHHHHhcCCce------eecCcccc
Confidence 55789999997443 577777889999999999 8899988652 1 11111122222 22211
Q ss_pred -------ccccccCCCC------ceehhhhhhhH------HHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEE
Q 016535 108 -------RKWIEESTYP------RFTMIGQSFGS------VYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYT 168 (388)
Q Consensus 108 -------~~~~~~~~~~------~~~~~~~~~~~------~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~ 168 (388)
.........+ .+......+.. .....+.+.+.+||+|+..........+++..++|.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~ 158 (412)
T 3otg_A 79 DGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHG 158 (412)
T ss_dssp HHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEEC
T ss_pred cchhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEec
Confidence 0000000000 00001111111 1233445777899998766442222225568899998877
Q ss_pred eccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHH--------hccCCEEEECChhHHHHHHHHh
Q 016535 169 HYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLV--------GSCADLAMVNSSWTQSHIEKLW 240 (388)
Q Consensus 169 h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~a~~ii~~S~~~~~~l~~~~ 240 (388)
|.+...... ..........++.+.. ...+|.+++.++...+...+..
T Consensus 159 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 213 (412)
T 3otg_A 159 VGRDTPDDL-------------------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRA 213 (412)
T ss_dssp CSCCCCSHH-------------------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHT
T ss_pred ccccCchhh-------------------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccC
Confidence 753321110 0001111111122221 2356778888777666554432
Q ss_pred CCCCceEEEcCCCCCCC-CccC-CCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC-Cc
Q 016535 241 GIPDRIKRVYPPCDTSG-LQVL-PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN-KS 317 (388)
Q Consensus 241 ~~~~~~~vi~ngvd~~~-~~~~-~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~-~~ 317 (388)
.. ....+.+.+.+... .... ......++.++++.|++. .++.+.+.++++.+.+. +.++++++++.. .+
T Consensus 214 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~------~~~~~~~~g~~~~~~ 285 (412)
T 3otg_A 214 RP-RRHELRPVPFAEQGDLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL------DADVLVASGPSLDVS 285 (412)
T ss_dssp CT-TEEECCCCCCCCCCCCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS------SSEEEEECCSSCCCT
T ss_pred CC-CcceeeccCCCCCCCCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC------CCEEEEEECCCCChh
Confidence 21 11111222222111 1100 011223456778889986 77888888888777543 677777776543 22
Q ss_pred cHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 318 DEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 318 ~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.++ +++++|.+.|++ ++.++|+.||++|.++ .+.+++|||++|+|+|+..
T Consensus 286 ------~l~------~~~~~v~~~~~~---~~~~~l~~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p 335 (412)
T 3otg_A 286 ------GLG------EVPANVRLESWV---PQAALLPHVDLVVHHG----GSGTTLGALGAGVPQLSFP 335 (412)
T ss_dssp ------TCC------CCCTTEEEESCC---CHHHHGGGCSEEEESC----CHHHHHHHHHHTCCEEECC
T ss_pred ------hhc------cCCCcEEEeCCC---CHHHHHhcCcEEEECC----chHHHHHHHHhCCCEEecC
Confidence 222 245799999998 3788999999999775 3378999999999999853
No 32
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.65 E-value=1.1e-14 Score=135.46 Aligned_cols=269 Identities=13% Similarity=0.089 Sum_probs=154.4
Q ss_pred cceEEEeccccCCCCCh-hhH--HHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccc
Q 016535 34 TTSVAFFHPNTNDGGGG-ERV--LWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~-~~~--~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (388)
+++|++. +||. +.+ +..++++|.++| ++|+.+++... ...+.....+.+ +..++..++
T Consensus 2 ~~~i~i~------~GGTgGHi~palala~~L~~~g--~~V~~vg~~~g-----~e~~~v~~~g~~------~~~i~~~~~ 62 (365)
T 3s2u_A 2 KGNVLIM------AGGTGGHVFPALACAREFQARG--YAVHWLGTPRG-----IENDLVPKAGLP------LHLIQVSGL 62 (365)
T ss_dssp -CEEEEE------CCSSHHHHHHHHHHHHHHHHTT--CEEEEEECSSS-----THHHHTGGGTCC------EEECC----
T ss_pred CCcEEEE------cCCCHHHHHHHHHHHHHHHhCC--CEEEEEECCch-----HhhchhhhcCCc------EEEEECCCc
Confidence 4567764 2332 343 467899999999 88888876531 111222222222 122221111
Q ss_pred cccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccc
Q 016535 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (388)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~ 188 (388)
-....+..+......++......+++++.+||+|+.+.++..... .++..++|+++ |.+....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vi--he~n~~~------------- 127 (365)
T 3s2u_A 63 RGKGLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVI--HEQNAVA------------- 127 (365)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEE--EECSSSC-------------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEE--Eecchhh-------------
Confidence 111122223334444555566677889999999998877553222 45688999885 4322100
Q ss_pred cCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCC---
Q 016535 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER--- 265 (388)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~--- 265 (388)
+. ..++..+.++.+....+.. ++...+..+..|++..+.+.......
T Consensus 128 ------------G~-----------~nr~l~~~a~~v~~~~~~~-------~~~~~k~~~~g~pvr~~~~~~~~~~~~~~ 177 (365)
T 3s2u_A 128 ------------GT-----------ANRSLAPIARRVCEAFPDT-------FPASDKRLTTGNPVRGELFLDAHARAPLT 177 (365)
T ss_dssp ------------CH-----------HHHHHGGGCSEEEESSTTS-------SCC---CEECCCCCCGGGCCCTTSSCCCT
T ss_pred ------------hh-----------HHHhhccccceeeeccccc-------ccCcCcEEEECCCCchhhccchhhhcccC
Confidence 00 1233446688887765432 23345677788888755443322111
Q ss_pred CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 266 ~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
......+++.|+.+..+..+.+.++++.+... .++.++++++.. + .+.+.+..++.+. ++.+.+++
T Consensus 178 ~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~-----~~~~vi~~~G~~---~---~~~~~~~~~~~~~--~~~v~~f~- 243 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE-----IRPAIRHQAGRQ---H---AEITAERYRTVAV--EADVAPFI- 243 (365)
T ss_dssp TSCCEEEECCTTTTCSHHHHHHHHHHHTSCTT-----TCCEEEEECCTT---T---HHHHHHHHHHTTC--CCEEESCC-
T ss_pred CCCcEEEEECCcCCccccchhhHHHHHhcccc-----cceEEEEecCcc---c---cccccceeccccc--ccccccch-
Confidence 12334556668888888888888888877444 355555444321 1 1255566666554 58888998
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+|+.++|+.||++|.-+ -+.++.|+|++|+|+|..
T Consensus 244 -~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ili 278 (365)
T 3s2u_A 244 -SDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLV 278 (365)
T ss_dssp -SCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEEC
T ss_pred -hhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEe
Confidence 78999999999999643 368899999999998854
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.62 E-value=1.5e-14 Score=136.15 Aligned_cols=290 Identities=11% Similarity=0.001 Sum_probs=163.0
Q ss_pred CccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccc
Q 016535 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (388)
Q Consensus 32 ~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 111 (388)
.++|||+++.-.- -+.... ..++++|.+.+.++++.++.+.... ....+..+.+++... +.+....
T Consensus 25 m~~~kI~~v~Gtr---~~~~~~-a~li~~l~~~~~~~~~~~~~tG~h~---~m~~~~~~~~~i~~~-----~~l~v~~-- 90 (403)
T 3ot5_A 25 MAKIKVMSIFGTR---PEAIKM-APLVLALEKEPETFESTVVITAQHR---EMLDQVLEIFDIKPD-----IDLDIMK-- 90 (403)
T ss_dssp -CCEEEEEEECSH---HHHHHH-HHHHHHHHTCTTTEEEEEEECC--------CHHHHHHTTCCCS-----EECCCCC--
T ss_pred cccceEEEEEecC---hhHHHH-HHHHHHHHhCCCCCcEEEEEecCcH---HHHHHHHHhcCCCCC-----cccccCC--
Confidence 3457899884322 133333 5688999887312676544433211 111222233444111 1111100
Q ss_pred ccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccc
Q 016535 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (388)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~ 188 (388)
..-+......+.+....+.+.+.+||+|+.......+++ .++..++|++ +++.+... +
T Consensus 91 -----~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs-------------~ 151 (403)
T 3ot5_A 91 -----KGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRT-------------W 151 (403)
T ss_dssp ------CCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCC-------------S
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEE-EEECCccc-------------c
Confidence 000111122233344455678889999876654333333 4457789964 33321100 0
Q ss_pred cCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccCCC--CC
Q 016535 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPL--ER 265 (388)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~~~--~~ 265 (388)
. +...+. ... ..++..+.+|.+++.|+..++.+.+.+-.++++.++.|+. |...+..... ..
T Consensus 152 ~---------~~~~~p---~~~---~r~~~~~~a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~ 216 (403)
T 3ot5_A 152 N---------KYSPFP---EEM---NRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHP 216 (403)
T ss_dssp C---------TTSSTT---HHH---HHHHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCH
T ss_pred c---------cccCCc---HHH---HHHHHHHhcCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcchH
Confidence 0 000000 001 1222334589999999999999987643356798898853 4221111100 00
Q ss_pred -----CCCCcEEEEEcccCC-CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE
Q 016535 266 -----STEYPAIISVAQFRP-EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339 (388)
Q Consensus 266 -----~~~~~~il~vgrl~~-~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~ 339 (388)
..++..+++.||... .|+++.+++|+..+.+++ |++++++.+.. +....+.+++. ++..++|.
T Consensus 217 ~~~~l~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~----~~~~~v~~~~~----~~~~~~~l~~~---~~~~~~v~ 285 (403)
T 3ot5_A 217 ILENLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESR----EDTELVYPMHL----NPAVREKAMAI---LGGHERIH 285 (403)
T ss_dssp HHHSCTTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHC----TTEEEEEECCS----CHHHHHHHHHH---HTTCTTEE
T ss_pred HHHhccCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhC----CCceEEEecCC----CHHHHHHHHHH---hCCCCCEE
Confidence 123355666777543 478999999999998875 78999987432 22222333332 23346899
Q ss_pred EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 340 ~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+.|+++..++..+|+.||++|.+| |-..+|||++|+|+|+.
T Consensus 286 l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~ 326 (403)
T 3ot5_A 286 LIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVL 326 (403)
T ss_dssp EECCCCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEEC
T ss_pred EeCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEe
Confidence 999999899999999999999887 33448999999999987
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.47 E-value=1.5e-12 Score=123.86 Aligned_cols=297 Identities=12% Similarity=0.023 Sum_probs=146.3
Q ss_pred cceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccccc
Q 016535 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (388)
.|+|+++. . .++|..+.+..++++|.++| |+|+++++... . +... ..++ .++.++.. .+.
T Consensus 7 m~kIl~~~-~--~~~Gh~~p~~~la~~L~~~G--~~V~~~~~~~~---~---~~~~-~~g~------~~~~~~~~--~~~ 66 (430)
T 2iyf_A 7 PAHIAMFS-I--AAHGHVNPSLEVIRELVARG--HRVTYAIPPVF---A---DKVA-ATGP------RPVLYHST--LPG 66 (430)
T ss_dssp -CEEEEEC-C--SCHHHHGGGHHHHHHHHHTT--CEEEEEECGGG---H---HHHH-TTSC------EEEECCCC--SCC
T ss_pred cceEEEEe-C--CCCccccchHHHHHHHHHCC--CeEEEEeCHHH---H---HHHH-hCCC------EEEEcCCc--Ccc
Confidence 36899873 2 22466677899999999999 89999887631 1 1111 1122 22222210 000
Q ss_pred CC------CCce-ehh---hh-hhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhh
Q 016535 114 ST------YPRF-TMI---GQ-SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVR 182 (388)
Q Consensus 114 ~~------~~~~-~~~---~~-~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~ 182 (388)
.. ...+ ..+ .. .........+.+++.+||+||..........+++..++|.+.+.+.+...........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 146 (430)
T 2iyf_A 67 PDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA 146 (430)
T ss_dssp TTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc
Confidence 00 0000 000 00 0111222334566789998876543221222666789999887764321100000000
Q ss_pred cCCccccCCccccccchhhhhhhHHHHHHHHHHHH--------HhccCCEEEECChhHHHHHHHHhCCCCc-eEEEcCCC
Q 016535 183 EGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL--------VGSCADLAMVNSSWTQSHIEKLWGIPDR-IKRVYPPC 253 (388)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~a~~ii~~S~~~~~~l~~~~~~~~~-~~vi~ngv 253 (388)
. ..+ ...... .............+.+. ....++.+++++....+...+.+ +.+ +..+.+++
T Consensus 147 ~--~~~---~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~v~~vG~~~ 216 (430)
T 2iyf_A 147 E--PMW---REPRQT---ERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV--DEDVYTFVGACQ 216 (430)
T ss_dssp H--HHH---HHHHHS---HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGS--CTTTEEECCCCC
T ss_pred c--chh---hhhccc---hHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccC--CCccEEEeCCcC
Confidence 0 000 000000 00000011111111111 12246788888765443322222 234 65666555
Q ss_pred CCCCCccCCCC--CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEE-EEEeCCCCCccHHHHHHHHHHHH
Q 016535 254 DTSGLQVLPLE--RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRL-QFVGSCRNKSDEERLQSLKDKSI 330 (388)
Q Consensus 254 d~~~~~~~~~~--~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l-~ivG~~~~~~~~~~~~~l~~~~~ 330 (388)
+..... ..+. ...+..+++++|++. .++.+.+.++++.+.+. +++++ +++|.+.+.+ .++
T Consensus 217 ~~~~~~-~~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-----~~~~~~~~~G~~~~~~------~l~---- 279 (430)
T 2iyf_A 217 GDRAEE-GGWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-----PGWHLVLQIGRKVTPA------ELG---- 279 (430)
T ss_dssp -----C-CCCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-----TTEEEEEECC---CGG------GGC----
T ss_pred CCCCCC-CCCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-----CCeEEEEEeCCCCChH------Hhc----
Confidence 422100 0111 123446788999998 55655555555555221 46777 5678654332 221
Q ss_pred hcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 331 ELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 331 ~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.++++|.+.|++++. ++|+.||++|..+ .+.+++|||++|+|+|+..
T Consensus 280 --~~~~~v~~~~~~~~~---~~l~~ad~~v~~~----G~~t~~Ea~~~G~P~i~~p 326 (430)
T 2iyf_A 280 --ELPDNVEVHDWVPQL---AILRQADLFVTHA----GAGGSQEGLATATPMIAVP 326 (430)
T ss_dssp --SCCTTEEEESSCCHH---HHHTTCSEEEECC----CHHHHHHHHHTTCCEEECC
T ss_pred --cCCCCeEEEecCCHH---HHhhccCEEEECC----CccHHHHHHHhCCCEEECC
Confidence 245799999999754 6899999999864 2378999999999999875
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.42 E-value=1.4e-12 Score=122.78 Aligned_cols=90 Identities=9% Similarity=0.001 Sum_probs=56.5
Q ss_pred CCcEEEEEcccCCCC----------ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc
Q 016535 268 EYPAIISVAQFRPEK----------AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (388)
Q Consensus 268 ~~~~il~vgrl~~~K----------g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (388)
.+.+++++|++...| .++.++++++.+ +++++++|++.+.+ .+. .+++|
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---------~~~~v~~~~~~~~~------~l~------~~~~~ 285 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---------GFEVVVAVSDKLAQ------TLQ------PLPEG 285 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---------TCEEEECCCC--------------------CCTT
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---------CCEEEEEeCCcchh------hhc------cCCCc
Confidence 457778889997655 344455544433 68899988764322 332 24689
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
|.+.|+++ ..+++..||++|.. +.+.+++|||++|+|+|+.
T Consensus 286 v~~~~~~~---~~~ll~~ad~~v~~----gG~~t~~Ea~~~G~P~v~~ 326 (398)
T 4fzr_A 286 VLAAGQFP---LSAIMPACDVVVHH----GGHGTTLTCLSEGVPQVSV 326 (398)
T ss_dssp EEEESCCC---HHHHGGGCSEEEEC----CCHHHHHHHHHTTCCEEEC
T ss_pred EEEeCcCC---HHHHHhhCCEEEec----CCHHHHHHHHHhCCCEEec
Confidence 99999985 56789999999953 4468899999999999984
No 36
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.38 E-value=3.7e-12 Score=119.45 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=69.2
Q ss_pred CCcEEEEEcccCCCCCh-HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQFRPEKAH-PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~-~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
++.++++.|+....|+. ..+++++... .+. |+++++++|+++..+ .+. +++++|++.|+++.
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~----p~~~~v~~~~~~~~~------~l~------~~~~~v~~~~~~~~ 280 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TEL----PGVEAVIAVPPEHRA------LLT------DLPDNARIAESVPL 280 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS----TTEEEEEECCGGGGG------GCT------TCCTTEEECCSCCG
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccC----CCeEEEEEECCcchh------hcc------cCCCCEEEeccCCH
Confidence 34667778998765544 7777777776 553 689999998764322 221 34679999999976
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.+ ++..||++|.. +.+.+++|||++|+|+|+.
T Consensus 281 ~~---ll~~ad~~v~~----~G~~t~~Ea~~~G~P~v~~ 312 (391)
T 3tsa_A 281 NL---FLRTCELVICA----GGSGTAFTATRLGIPQLVL 312 (391)
T ss_dssp GG---TGGGCSEEEEC----CCHHHHHHHHHTTCCEEEC
T ss_pred HH---HHhhCCEEEeC----CCHHHHHHHHHhCCCEEec
Confidence 54 56999999964 4457899999999999984
No 37
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.37 E-value=8.7e-11 Score=113.41 Aligned_cols=105 Identities=11% Similarity=0.126 Sum_probs=82.4
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEE--EEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ--FVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~--ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+++++.++ ..|..+.++++++++.++. |+-.+. ++|.+... . +.+.+.+.+.|+.+++.|.|.++.+
T Consensus 442 v~Fg~fn~--~~Ki~p~~l~~WarIL~~v----P~s~L~l~~~g~~~g~-~----~~~~~~~~~~GI~~Rv~F~g~~p~~ 510 (631)
T 3q3e_A 442 VNIGIAST--TMKLNPYFLEALKAIRDRA----KVKVHFHFALGQSNGI-T----HPYVERFIKSYLGDSATAHPHSPYH 510 (631)
T ss_dssp EEEEEEEC--STTCCHHHHHHHHHHHHHC----SSEEEEEEEESSCCGG-G----HHHHHHHHHHHHGGGEEEECCCCHH
T ss_pred EEEEECCc--cccCCHHHHHHHHHHHHhC----CCcEEEEEecCCCchh-h----HHHHHHHHHcCCCccEEEcCCCCHH
Confidence 45555565 5799999999999999986 666554 35642111 1 1334445667888899999999999
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+..+.|+.+|++|.|+.+++ |++.+|||+||+|||+..
T Consensus 511 e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~ 548 (631)
T 3q3e_A 511 QYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKT 548 (631)
T ss_dssp HHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEecc
Confidence 99999999999999997755 999999999999999964
No 38
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.34 E-value=3.9e-12 Score=119.63 Aligned_cols=94 Identities=15% Similarity=0.019 Sum_probs=69.0
Q ss_pred CCCcEEEEEcccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
.++.+++++|++... ++.+.+.++++.+.+. +++++++|++++.+ .+. ++++||.+.|+++
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~------~~~~v~~~g~~~~~------~l~------~~~~~v~~~~~~~ 292 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV------DADFVLALGDLDIS------PLG------TLPRNVRAVGWTP 292 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS------SSEEEEECTTSCCG------GGC------SCCTTEEEESSCC
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC------CCEEEEEECCcChh------hhc------cCCCcEEEEccCC
Confidence 345778888998655 4666666666666432 78999998875433 222 3568999999985
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+.+++..||++|.. +.+.+++|||++|+|+|+.
T Consensus 293 ---~~~ll~~ad~~v~~----~G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 293 ---LHTLLRTCTAVVHH----GGGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp ---HHHHHTTCSEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred ---HHHHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEc
Confidence 45678899999964 4457899999999999983
No 39
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.27 E-value=4.3e-10 Score=105.53 Aligned_cols=93 Identities=15% Similarity=0.080 Sum_probs=60.6
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEE-EeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQF-VGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
.++.++++.|+....+. +.+.++++.+. + .++++++ +|.+.+.+ .+. .++++|.+.|+++
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~-~-----~~~~~~~~~g~~~~~~------~~~------~~~~~v~~~~~~~ 290 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFA-D-----TPWHVVMAIGGFLDPA------VLG------PLPPNVEAHQWIP 290 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHT-T-----SSCEEEEECCTTSCGG------GGC------SCCTTEEEESCCC
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHh-c-----CCcEEEEEeCCcCChh------hhC------CCCCcEEEecCCC
Confidence 34577888899876652 33333333332 2 2466666 45432222 221 2457999999997
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+. ++++.||++|..+- ..+++|||++|+|+|+.
T Consensus 291 ~~---~ll~~ad~~v~~~G----~~t~~Ea~~~G~P~v~~ 323 (402)
T 3ia7_A 291 FH---SVLAHARACLTHGT----TGAVLEAFAAGVPLVLV 323 (402)
T ss_dssp HH---HHHTTEEEEEECCC----HHHHHHHHHTTCCEEEC
T ss_pred HH---HHHhhCCEEEECCC----HHHHHHHHHhCCCEEEe
Confidence 64 89999999997742 36789999999999964
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.26 E-value=2.4e-10 Score=106.51 Aligned_cols=208 Identities=10% Similarity=0.003 Sum_probs=130.2
Q ss_pred HHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhH
Q 016535 129 VYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (388)
Q Consensus 129 ~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (388)
.....+.+.+.+||+|+.......+++ .++..++|++ +++.... .+.. ......
T Consensus 83 ~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~-h~eaglr-------------s~~~----------~~pee~ 138 (385)
T 4hwg_A 83 IEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIF-HMEAGNR-------------CFDQ----------RVPEEI 138 (385)
T ss_dssp HHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEE-EESCCCC-------------CSCT----------TSTHHH
T ss_pred HHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEE-EEeCCCc-------------cccc----------cCcHHH
Confidence 334445678889998876554333333 4457889954 3432110 0000 000001
Q ss_pred HHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCc----c-C----CCCCCCCCcEEEEEc
Q 016535 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQ----V-L----PLERSTEYPAIISVA 276 (388)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~----~-~----~~~~~~~~~~il~vg 276 (388)
. .+...+.+|.+++.++..++.+.+.+-.++++.++.|+. |...+. . . ...-..++..+++.+
T Consensus 139 n-------R~~~~~~a~~~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~~~iLvt~h 211 (385)
T 4hwg_A 139 N-------RKIIDHISDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSH 211 (385)
T ss_dssp H-------HHHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTTSEEEEEEC
T ss_pred H-------HHHHHhhhceeecCCHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcCCEEEEEeC
Confidence 1 122234589999999999999987643356788888864 421111 0 0 001112345666677
Q ss_pred ccC---CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhc-C-C--CCcEEEccCCCHHHH
Q 016535 277 QFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL-K-V--DGNVEFYKNLLYRDL 349 (388)
Q Consensus 277 rl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~-~-l--~~~V~~~g~v~~~~l 349 (388)
|.+ ..|+++.+++|+..+.+++ ++.+++.. .. .+++.+++. + + .++|.+.+.++..++
T Consensus 212 r~e~~~~~~~l~~ll~al~~l~~~~-----~~~vv~p~------~p----~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~ 276 (385)
T 4hwg_A 212 REENVDVKNNLKELLNSLQMLIKEY-----NFLIIFST------HP----RTKKRLEDLEGFKELGDKIRFLPAFSFTDY 276 (385)
T ss_dssp CC-----CHHHHHHHHHHHHHHHHH-----CCEEEEEE------CH----HHHHHHHTSGGGGGTGGGEEECCCCCHHHH
T ss_pred CchhcCcHHHHHHHHHHHHHHHhcC-----CeEEEEEC------Ch----HHHHHHHHHHHHhcCCCCEEEEcCCCHHHH
Confidence 643 4478899999999997764 67777755 22 344445444 3 2 368999999998999
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
..+|+.||+++..| |.+..||+++|+|+|+.+.
T Consensus 277 ~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~ 309 (385)
T 4hwg_A 277 VKLQMNAFCILSDS-----GTITEEASILNLPALNIRE 309 (385)
T ss_dssp HHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSS
T ss_pred HHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCC
Confidence 99999999999776 4567999999999998653
No 41
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.24 E-value=9.5e-10 Score=102.72 Aligned_cols=89 Identities=8% Similarity=-0.063 Sum_probs=64.3
Q ss_pred CcEEEEEcccCCC-------CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc
Q 016535 269 YPAIISVAQFRPE-------KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (388)
Q Consensus 269 ~~~il~vgrl~~~-------Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~ 341 (388)
..+++++|++... +.++.++++++.+ ++++++++++ . ..+++.. ++++|.+
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---------~~~~~~~~g~-----~-~~~~l~~------~~~~v~~- 268 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---------DVELIVAAPD-----T-VAEALRA------EVPQARV- 268 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---------TCEEEEECCH-----H-HHHHHHH------HCTTSEE-
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---------CcEEEEEeCC-----C-CHHhhCC------CCCceEE-
Confidence 4678899999875 5566666666533 6788887642 1 1223322 3478999
Q ss_pred cCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 342 KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 342 g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
|+++. .++|..||++|.. +.+.+++|||++|+|+|+..
T Consensus 269 ~~~~~---~~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~v~~p 306 (384)
T 2p6p_A 269 GWTPL---DVVAPTCDLLVHH----AGGVSTLTGLSAGVPQLLIP 306 (384)
T ss_dssp ECCCH---HHHGGGCSEEEEC----SCTTHHHHHHHTTCCEEECC
T ss_pred cCCCH---HHHHhhCCEEEeC----CcHHHHHHHHHhCCCEEEcc
Confidence 99965 4578999999986 34578999999999999874
No 42
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.19 E-value=5e-10 Score=105.70 Aligned_cols=93 Identities=13% Similarity=0.011 Sum_probs=60.3
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEE-EeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQF-VGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
..+.++++.|+.....+ +.+-++++.+ .+ .++++++ +|.+.+.+ .+. .+++||.+.|+++
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al-~~-----~~~~~v~~~g~~~~~~------~l~------~~~~~v~~~~~~~ 306 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAF-DG-----QPWHVVMTLGGQVDPA------ALG------DLPPNVEAHRWVP 306 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHH-TT-----SSCEEEEECTTTSCGG------GGC------CCCTTEEEESCCC
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHH-hc-----CCcEEEEEeCCCCChH------Hhc------CCCCcEEEEecCC
Confidence 34577888898865432 2222333323 22 1477777 45433222 221 2467999999997
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+. +++..||++|..+ -..+++|||++|+|+|+.
T Consensus 307 ~~---~ll~~ad~~v~~~----G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 307 HV---KVLEQATVCVTHG----GMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp HH---HHHHHEEEEEESC----CHHHHHHHHHTTCCEEEC
T ss_pred HH---HHHhhCCEEEECC----cHHHHHHHHHhCCCEEEe
Confidence 54 7899999999764 236889999999999983
No 43
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.04 E-value=4.8e-09 Score=98.36 Aligned_cols=94 Identities=12% Similarity=-0.009 Sum_probs=61.7
Q ss_pred CCCcEEEEEcccCCCCC-hHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKA-HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg-~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
....++++.|+....++ .+.+.++++.+.+ .+.++++.+.+.+.+ . ...+++|+.+.+++|
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~------~~~~~v~~~~~~~~~------~------~~~~~~~v~~~~~~p 297 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD------VDAEFVLTLGGGDLA------L------LGELPANVRVVEWIP 297 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG------SSSEEEEECCTTCCC------C------CCCCCTTEEEECCCC
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc------cCceEEEEecCcccc------c------cccCCCCEEEEeecC
Confidence 34466677788775444 3444444444432 367777776554332 1 124578999999997
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.. ++|..+|++|.- +...++.|||++|+|+|+.
T Consensus 298 ~~---~lL~~~~~~v~h----~G~~s~~Eal~~GvP~v~~ 330 (400)
T 4amg_A 298 LG---ALLETCDAIIHH----GGSGTLLTALAAGVPQCVI 330 (400)
T ss_dssp HH---HHHTTCSEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred HH---HHhhhhhheecc----CCccHHHHHHHhCCCEEEe
Confidence 65 467899998863 4456899999999999974
No 44
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.01 E-value=1.5e-08 Score=96.38 Aligned_cols=90 Identities=10% Similarity=-0.043 Sum_probs=64.2
Q ss_pred CcEEEEEcccCC-----CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 269 YPAIISVAQFRP-----EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 269 ~~~il~vgrl~~-----~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
..++++.|+... .|.+..++++++.+ ++++++++++...+ .+. ++++||.+.|+
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~~------~l~------~~~~~v~~~~~ 326 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV---------DAEIIATFDAQQLE------GVA------NIPDNVRTVGF 326 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS---------SSEEEECCCTTTTS------SCS------SCCSSEEECCS
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC---------CCEEEEEECCcchh------hhc------cCCCCEEEecC
Confidence 467888999875 48888888888644 68888877654322 121 34679999999
Q ss_pred CCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+++. ++|..||++|+. +.+.++.|||++|+|+|+..
T Consensus 327 ~~~~---~ll~~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p 362 (441)
T 2yjn_A 327 VPMH---ALLPTCAATVHH----GGPGSWHTAAIHGVPQVILP 362 (441)
T ss_dssp CCHH---HHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECC
T ss_pred CCHH---HHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEeC
Confidence 9764 568999999974 44579999999999999874
No 45
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.98 E-value=3.3e-08 Score=99.50 Aligned_cols=104 Identities=13% Similarity=0.069 Sum_probs=85.9
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC-CcEEEccCCCHHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEFYKNLLYRD 348 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-~~V~~~g~v~~~~ 348 (388)
+++++..+ ..|=-+..++++.++.++. |+-+|++..... ...+.+++.+++.|++ ++|.|.+..+.++
T Consensus 524 v~f~~fN~--~~Ki~p~~~~~W~~IL~~v----P~S~L~Ll~~~~-----~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~ 592 (723)
T 4gyw_A 524 IVYCNFNQ--LYKIDPSTLQMWANILKRV----PNSVLWLLRFPA-----VGEPNIQQYAQNMGLPQNRIIFSPVAPKEE 592 (723)
T ss_dssp EEEECCSC--GGGCCHHHHHHHHHHHHHC----SSEEEEEEETTG-----GGHHHHHHHHHHTTCCGGGEEEEECCCHHH
T ss_pred EEEEeCCc--cccCCHHHHHHHHHHHHhC----CCCeEEEEeCcH-----HHHHHHHHHHHhcCCCcCeEEECCCCCHHH
Confidence 44444444 4677799999999999996 899999987632 2235788889999984 7799999999999
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
-.+.|+.+|++|-|-.+ +-+.+..||+.+|+|||+-
T Consensus 593 ~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~ 628 (723)
T 4gyw_A 593 HVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTM 628 (723)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBC
T ss_pred HHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEc
Confidence 99999999999998777 4589999999999999985
No 46
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=98.97 E-value=4.1e-08 Score=92.87 Aligned_cols=94 Identities=15% Similarity=-0.019 Sum_probs=62.8
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEE-EEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ-FVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~-ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
.+..++++.|+.. .+..+.+.++++.+.+ .+++++ ++|.+.+.+ ++ + .++++|.+.++++
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~------~~~~~~~~~g~~~~~~------~~----~--~~~~~v~~~~~~~ 314 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG------LDWHVVLSVGRFVDPA------DL----G--EVPPNVEVHQWVP 314 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT------CSSEEEEECCTTSCGG------GG----C--SCCTTEEEESSCC
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc------CCcEEEEEECCcCChH------Hh----c--cCCCCeEEecCCC
Confidence 3456778889887 4444444444444422 367774 457543222 22 1 2467999999997
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+. ++|..||++|.. +-..+++|||++|+|+|+..
T Consensus 315 ~~---~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p 348 (424)
T 2iya_A 315 QL---DILTKASAFITH----AGMGSTMEALSNAVPMVAVP 348 (424)
T ss_dssp HH---HHHTTCSEEEEC----CCHHHHHHHHHTTCCEEECC
T ss_pred HH---HHHhhCCEEEEC----CchhHHHHHHHcCCCEEEec
Confidence 64 689999998874 23478999999999999864
No 47
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.86 E-value=6.2e-08 Score=91.06 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=64.3
Q ss_pred CCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
++.++++.|+.. +.+..+.++++++.+ ++++++.++....+ ..+.++||.+.+++|.
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---------~~~vv~~~g~~~~~-------------~~~~~~~v~~~~~~~~ 278 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ---------GRRVVLSSGWAGLG-------------RIDEGDDCLVVGEVNH 278 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT---------TCCEEEECTTTTCC-------------CSSCCTTEEEESSCCH
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC---------CCEEEEEeCCcccc-------------cccCCCCEEEecCCCH
Confidence 456788889988 666667777776654 57777776543222 1134679999999976
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+ +++..||++|..+ -..++.||+++|+|+|+.
T Consensus 279 ~---~ll~~~d~~v~~g----G~~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 279 Q---VLFGRVAAVVHHG----GAGTTTAVTRAGAPQVVV 310 (404)
T ss_dssp H---HHGGGSSEEEECC----CHHHHHHHHHHTCCEEEC
T ss_pred H---HHHhhCcEEEECC----cHHHHHHHHHcCCCEEEc
Confidence 4 4678999999764 226899999999999974
No 48
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.70 E-value=2.1e-08 Score=82.24 Aligned_cols=89 Identities=13% Similarity=0.073 Sum_probs=66.6
Q ss_pred CcEEEEEcccC---CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 269 YPAIISVAQFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 269 ~~~il~vgrl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
..++++.|++. +.|.+..++++++.+ +.++++++++...+ .++++|++.|+++
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~~~~~g~~~~~---------------~~~~~v~~~~~~~ 77 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---------PQKVLWRFDGNKPD---------------TLGLNTRLYKWIP 77 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---------SSEEEEECCSSCCT---------------TCCTTEEEESSCC
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---------CCeEEEEECCcCcc---------------cCCCcEEEecCCC
Confidence 47788899986 556677777776533 57888887654321 2457999999998
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
++++..+ ..||++|+. +.+.+++|||++|+|+|+..
T Consensus 78 ~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p 113 (170)
T 2o6l_A 78 QNDLLGH-PKTRAFITH----GGANGIYEAIYHGIPMVGIP 113 (170)
T ss_dssp HHHHHTS-TTEEEEEEC----CCHHHHHHHHHHTCCEEECC
T ss_pred HHHHhcC-CCcCEEEEc----CCccHHHHHHHcCCCEEecc
Confidence 7655432 999999974 44589999999999999875
No 49
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.63 E-value=2.7e-06 Score=80.04 Aligned_cols=88 Identities=17% Similarity=0.100 Sum_probs=61.4
Q ss_pred CcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEE-eCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 269 YPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 269 ~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
..++++.|+.. +.+..+.++++++.+ +.+++++ |.+... . ..+++++.+.+++|+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~~--------~------~~~~~~v~~~~~~~~ 295 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---------GRRVILSRGWADLV--------L------PDDGADCFAIGEVNH 295 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---------TCCEEECTTCTTCC--------C------SSCGGGEEECSSCCH
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---------CCeEEEEeCCCccc--------c------cCCCCCEEEeCcCCh
Confidence 57788889984 777777777777655 4555555 643211 0 134578999999987
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+ ++.+||++|.. +-..+++|||++|+|+|+..
T Consensus 296 ~~---~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p 328 (415)
T 1iir_A 296 QV---LFGRVAAVIHH----GGAGTTHVAARAGAPQILLP 328 (415)
T ss_dssp HH---HGGGSSEEEEC----CCHHHHHHHHHHTCCEEECC
T ss_pred HH---HHhhCCEEEeC----CChhHHHHHHHcCCCEEECC
Confidence 54 57999999975 23369999999999999863
No 50
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.54 E-value=2.6e-06 Score=84.25 Aligned_cols=173 Identities=14% Similarity=0.106 Sum_probs=126.0
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHH-hCC-----CCceEEEcCCCCCCCCc----cC---------C------------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKL-WGI-----PDRIKRVYPPCDTSGLQ----VL---------P------------ 262 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~-~~~-----~~~~~vi~ngvd~~~~~----~~---------~------------ 262 (388)
+.+.++..++.+.++|+.-.+.+++. ++. +.++.-+-||+|+.... |. .
T Consensus 395 Ma~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~ 474 (796)
T 2c4m_A 395 MAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELK 474 (796)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGG
T ss_pred HHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHH
Confidence 35677789999999999999988741 111 56888999999876651 10 0
Q ss_pred -----CCC------------------------------CCCCcEEEEEcccCCCCChHH-HHHHHHHHHH--HhcC-CCC
Q 016535 263 -----LER------------------------------STEYPAIISVAQFRPEKAHPL-QLEAFSVALR--KLDA-DLP 303 (388)
Q Consensus 263 -----~~~------------------------------~~~~~~il~vgrl~~~Kg~~~-ll~a~~~l~~--~~~~-~~~ 303 (388)
.+. .++...++++.|+..+||+++ ++..+..+.+ +++. ...
T Consensus 475 ~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~ 554 (796)
T 2c4m_A 475 KLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIP 554 (796)
T ss_dssp GGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSC
T ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCC
Confidence 000 035678899999999999999 8888887764 2110 113
Q ss_pred CcEEEEEeCCCCCccHH--HHHHHHHHHH----hcCCCC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHH
Q 016535 304 RPRLQFVGSCRNKSDEE--RLQSLKDKSI----ELKVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVV 373 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~--~~~~l~~~~~----~~~l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vl 373 (388)
++++++.|.+.+..... ..+.+.+.++ +-.+++ +|.|+...+.+--..++.+||++++||. .|+.|++-+
T Consensus 555 p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~M 634 (796)
T 2c4m_A 555 ARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNM 634 (796)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHH
T ss_pred CeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHH
Confidence 69999999986553211 1112333333 224567 7999988888888889999999999998 999999999
Q ss_pred HHHHhCCceEeeC
Q 016535 374 EYMAAGAIPIGKH 386 (388)
Q Consensus 374 EAma~G~PVI~~~ 386 (388)
=+|..|++.|++-
T Consensus 635 Kam~NGaL~iGtL 647 (796)
T 2c4m_A 635 KFMMNGALTLGTM 647 (796)
T ss_dssp HHHHTTCEEEEES
T ss_pred HHHHcCCeEEecc
Confidence 9999999999873
No 51
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.50 E-value=1.2e-05 Score=75.70 Aligned_cols=87 Identities=15% Similarity=0.063 Sum_probs=60.8
Q ss_pred CcEEEEEcccC---CCCChHHHHHHHHHHHHHhcCCCCCcEEEEE-eCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 269 YPAIISVAQFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 269 ~~~il~vgrl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
..++++.|+.. ..+..+.++++++.+ +.+++++ |.+.. + . ..+++++.+.+++
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~-~-------~------~~~~~~v~~~~~~ 294 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---------GRRVILSRGWTEL-V-------L------PDDRDDCFAIDEV 294 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---------TCCEEEECTTTTC-C-------C------SCCCTTEEEESSC
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---------CCeEEEEeCCccc-c-------c------cCCCCCEEEeccC
Confidence 46777889875 345556666666544 4566665 64321 1 0 1356799999999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
|.+ ++|.+||++|.- +-..++.||+++|+|+|+.
T Consensus 295 ~~~---~ll~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~ 328 (416)
T 1rrv_A 295 NFQ---ALFRRVAAVIHH----GSAGTEHVATRAGVPQLVI 328 (416)
T ss_dssp CHH---HHGGGSSEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred ChH---HHhccCCEEEec----CChhHHHHHHHcCCCEEEc
Confidence 754 468999999983 3356999999999999985
No 52
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.47 E-value=1.8e-06 Score=85.31 Aligned_cols=173 Identities=13% Similarity=0.059 Sum_probs=124.0
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHH-----hC-CCCceEEEcCCCCCCCC----cc-----------------------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKL-----WG-IPDRIKRVYPPCDTSGL----QV----------------------- 260 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~-----~~-~~~~~~vi~ngvd~~~~----~~----------------------- 260 (388)
+.+.++..++.+.++|+.-.+.+++. +. .+.++.-+-||+|.... .|
T Consensus 406 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~ 485 (796)
T 1l5w_A 406 MANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLIN 485 (796)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGG
T ss_pred HHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHH
Confidence 45677789999999999999998641 11 15688899999975322 00
Q ss_pred ----CC-------C---------------------CCCCCCcEEEEEcccCCCCChHH-HHHHHHHHHHHhcC---CCCC
Q 016535 261 ----LP-------L---------------------ERSTEYPAIISVAQFRPEKAHPL-QLEAFSVALRKLDA---DLPR 304 (388)
Q Consensus 261 ----~~-------~---------------------~~~~~~~~il~vgrl~~~Kg~~~-ll~a~~~l~~~~~~---~~~~ 304 (388)
.+ . ...++...++++.|+..+||+++ ++.++..+.+-..+ ...+
T Consensus 486 l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p 565 (796)
T 1l5w_A 486 LEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP 565 (796)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCC
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCC
Confidence 00 0 00045678999999999999999 88888877552111 1136
Q ss_pred cEEEEEeCCCCCccHH--HHHHHHHHHH----hcCCCC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHH
Q 016535 305 PRLQFVGSCRNKSDEE--RLQSLKDKSI----ELKVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVE 374 (388)
Q Consensus 305 ~~l~ivG~~~~~~~~~--~~~~l~~~~~----~~~l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlE 374 (388)
+++++.|.+.+..... ..+.+.+.++ +-.+++ +|.|+...+.+--..++.+||+.++||. .|+.|++-+=
T Consensus 566 ~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MK 645 (796)
T 1l5w_A 566 RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMK 645 (796)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHH
T ss_pred eEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHH
Confidence 9999999986553211 1112333333 224556 7999988888888889999999999998 9999999999
Q ss_pred HHHhCCceEeeC
Q 016535 375 YMAAGAIPIGKH 386 (388)
Q Consensus 375 Ama~G~PVI~~~ 386 (388)
||..|++.|++-
T Consensus 646 am~NGaL~iGtL 657 (796)
T 1l5w_A 646 LALNGALTVGTL 657 (796)
T ss_dssp HHHTTCEEEECS
T ss_pred HHHcCCeeecCc
Confidence 999999999873
No 53
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=98.27 E-value=1.7e-05 Score=78.83 Aligned_cols=173 Identities=14% Similarity=0.069 Sum_probs=123.9
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHH-hCC-----CCceEEEcCCCCCCCC----ccC-------C--------------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKL-WGI-----PDRIKRVYPPCDTSGL----QVL-------P-------------- 262 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~-~~~-----~~~~~vi~ngvd~~~~----~~~-------~-------------- 262 (388)
+.+.++..++.+.++|+.-.+.+++. ++. +.++.-+-||+|+... .|. .
T Consensus 430 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~ 509 (824)
T 2gj4_A 430 MAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRK 509 (824)
T ss_dssp HHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGG
T ss_pred HHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHH
Confidence 35677889999999999998888631 111 5688899999987654 110 0
Q ss_pred ---CCC-------------------------------CCCCcEEEEEcccCCCCChHHH-HHHHHHHHH--HhcC-CCCC
Q 016535 263 ---LER-------------------------------STEYPAIISVAQFRPEKAHPLQ-LEAFSVALR--KLDA-DLPR 304 (388)
Q Consensus 263 ---~~~-------------------------------~~~~~~il~vgrl~~~Kg~~~l-l~a~~~l~~--~~~~-~~~~ 304 (388)
... .++...++++.|+..+||+++. +..+..+.+ ..+. ...+
T Consensus 510 L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p 589 (824)
T 2gj4_A 510 LLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVP 589 (824)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCC
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCC
Confidence 000 0355789999999999999997 788777742 2211 0126
Q ss_pred cEEEEEeCCCCCccHH--HHHHHHHHHHhc----CCCC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHH
Q 016535 305 PRLQFVGSCRNKSDEE--RLQSLKDKSIEL----KVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVE 374 (388)
Q Consensus 305 ~~l~ivG~~~~~~~~~--~~~~l~~~~~~~----~l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlE 374 (388)
+++++.|.+.+..... ..+.+.+.++.. .+++ +|.|+...+.+--..++.+||+.++||. .|+.|++-+=
T Consensus 590 ~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MK 669 (824)
T 2gj4_A 590 RTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMK 669 (824)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHH
T ss_pred EEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHH
Confidence 7999999986553211 112244444322 2356 7999988888888889999999999998 9999999999
Q ss_pred HHHhCCceEeeC
Q 016535 375 YMAAGAIPIGKH 386 (388)
Q Consensus 375 Ama~G~PVI~~~ 386 (388)
||..|++.|++-
T Consensus 670 amlNGaLtigtl 681 (824)
T 2gj4_A 670 FMLNGALTIGTM 681 (824)
T ss_dssp HHHTTCEEEECS
T ss_pred HHHcCceEEEEe
Confidence 999999999874
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.97 E-value=0.00053 Score=62.55 Aligned_cols=99 Identities=14% Similarity=0.074 Sum_probs=66.0
Q ss_pred CcEEEEEcc-cCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcC--C-CCcEEEcc
Q 016535 269 YPAIISVAQ-FRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK--V-DGNVEFYK 342 (388)
Q Consensus 269 ~~~il~vgr-l~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~--l-~~~V~~~g 342 (388)
+.+++..|. ..+.|... .+.++++.|.++ +++++++|+.. +.+ ..++..+..+ . ...+.+.|
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~------~~~vvl~g~~~---e~~---~~~~i~~~~~~~~~~~~~~l~g 248 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE------GYQVVLFGSAK---DHE---AGNEILAALNTEQQAWCRNLAG 248 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT------TCEEEECCCGG---GHH---HHHHHHTTSCHHHHTTEEECTT
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC------CCeEEEEeChh---hHH---HHHHHHHhhhhccccceEeccC
Confidence 355666666 55667665 788888877654 67888888643 222 2233332221 0 12346779
Q ss_pred CCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 343 ~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
..+-.|+.++++.||++|... .|. +-.|.++|+|+|+
T Consensus 249 ~~sl~e~~ali~~a~l~I~~D----sg~-~HlAaa~g~P~v~ 285 (348)
T 1psw_A 249 ETQLDQAVILIAACKAIVTND----SGL-MHVAAALNRPLVA 285 (348)
T ss_dssp TSCHHHHHHHHHTSSEEEEES----SHH-HHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCEEEecC----CHH-HHHHHHcCCCEEE
Confidence 899999999999999999864 233 3349999999997
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.86 E-value=0.0022 Score=58.57 Aligned_cols=98 Identities=13% Similarity=0.031 Sum_probs=66.9
Q ss_pred cEEEEEcccCCCCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 270 PAIISVAQFRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
.+.+..|.-.+.|.. +...+.++.+.++ +.+++++|+.. +.+ ..++..+..+. ..+.+.|..+-.
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~------g~~vvl~g~~~---e~~---~~~~i~~~~~~-~~~~l~g~~sl~ 253 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRL------GYKTVFFGGPM---DLE---MVQPVVEQMET-KPIVATGKFQLG 253 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHH------TCEEEECCCTT---THH---HHHHHHHTCSS-CCEECTTCCCHH
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhC------CCeEEEEeCcc---hHH---HHHHHHHhccc-ccEEeeCCCCHH
Confidence 555666654556655 4677888888765 56778888643 222 33444444432 346677999999
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
|+.++++.||++|.. ..|..-+ |.++|+|+|+-
T Consensus 254 e~~ali~~a~~~i~~----DsG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 254 PLAAAMNRCNLLITN----DSGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp HHHHHHHTCSEEEEE----SSHHHHH-HHTTTCCEEEE
T ss_pred HHHHHHHhCCEEEEC----CCCHHHH-HHhcCCCEEEE
Confidence 999999999999986 3344545 88999999973
No 56
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=97.61 E-value=5.3e-05 Score=66.92 Aligned_cols=92 Identities=13% Similarity=0.021 Sum_probs=62.7
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l 349 (388)
.++++.|..++..-...+++++. +. .+ ..++.|.+.. ..+++++.+++. .++++.+++ +++
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~---~~-----~~-i~vv~G~~~~-----~~~~l~~~~~~~---~~v~v~~~~--~~m 219 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELP---KT-----KI-ISIATSSSNP-----NLKKLQKFAKLH---NNIRLFIDH--ENI 219 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSC---TT-----SC-EEEEECTTCT-----THHHHHHHHHTC---SSEEEEESC--SCH
T ss_pred eEEEEECCCchhhHHHHHHHHhh---cC-----CC-EEEEECCCch-----HHHHHHHHHhhC---CCEEEEeCH--HHH
Confidence 55667887655443333444433 21 23 4456676532 234677766653 489999998 899
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++|++||+.|.+ + |.++.|++++|+|.|.-
T Consensus 220 ~~~m~~aDlvI~~----g-G~T~~E~~~~g~P~i~i 250 (282)
T 3hbm_A 220 AKLMNESNKLIIS----A-SSLVNEALLLKANFKAI 250 (282)
T ss_dssp HHHHHTEEEEEEE----S-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHCCEEEEC----C-cHHHHHHHHcCCCEEEE
Confidence 9999999999984 2 57999999999998863
No 57
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=97.55 E-value=0.06 Score=51.02 Aligned_cols=99 Identities=10% Similarity=-0.101 Sum_probs=56.6
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+..++++.|.....-+.+.+.+++..+.+. +.+++++-+.... ...+.+.+.... ++++.+.+++|+.
T Consensus 276 ~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~------~~~~l~~~~~~~~---~l~~~~~~~~~~---~~~~~v~~w~pq~ 343 (463)
T 2acv_A 276 KSVVFLCFGSMGVSFGPSQIREIALGLKHS------GVRFLWSNSAEKK---VFPEGFLEWMEL---EGKGMICGWAPQV 343 (463)
T ss_dssp TCEEEEECCSSCCCCCHHHHHHHHHHHHHH------TCEEEEECCCCGG---GSCTTHHHHHHH---HCSEEEESSCCHH
T ss_pred CceEEEEeccccccCCHHHHHHHHHHHHhC------CCcEEEEECCCcc---cCChhHHHhhcc---CCCEEEEccCCHH
Confidence 346666778776322334444555555433 5666655433100 000123222210 2578889999765
Q ss_pred HHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 348 DLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++|. ++|+||.- +-..+++||+++|+|.|+-
T Consensus 344 ---~vL~h~~~~~fvth----~G~~s~~Eal~~GvP~i~~ 376 (463)
T 2acv_A 344 ---EVLAHKAIGGFVSH----CGWNSILESMWFGVPILTW 376 (463)
T ss_dssp ---HHHHSTTEEEEEEC----CCHHHHHHHHHTTCCEEEC
T ss_pred ---HHhCCCccCeEEec----CCchhHHHHHHcCCCeeec
Confidence 3576 57777764 3356899999999999974
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.55 E-value=0.0044 Score=55.86 Aligned_cols=98 Identities=17% Similarity=0.137 Sum_probs=63.2
Q ss_pred CcEEEEEcccCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 269 YPAIISVAQFRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+.+++..|.-.+.|... ...+.++.+.+ .+.++++.+++ .+..+..++..+.. +++.+.|..+-
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~------~~~~vvl~~g~-----~~e~~~~~~i~~~~---~~~~l~g~~sl 244 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLAD------SGIRIKLPWGA-----PHEEERAKRLAEGF---AYVEVLPKMSL 244 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTT------TCCEEEECCSS-----HHHHHHHHHHHTTC---TTEEECCCCCH
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHH------CCCcEEEecCC-----HHHHHHHHHHHhhC---CcccccCCCCH
Confidence 35566666655667666 55555555532 36788887332 22222333433332 25678899999
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.|+.++++.||++|.. ..|..=+ |.|.|+|+|+-
T Consensus 245 ~el~ali~~a~l~I~~----DSG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 245 EGVARVLAGAKFVVSV----DTGLSHL-TAALDRPNITV 278 (326)
T ss_dssp HHHHHHHHTCSEEEEE----SSHHHHH-HHHTTCCEEEE
T ss_pred HHHHHHHHhCCEEEec----CCcHHHH-HHHcCCCEEEE
Confidence 9999999999999987 2344545 67799999873
No 59
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=97.41 E-value=0.05 Score=51.47 Aligned_cols=96 Identities=11% Similarity=-0.027 Sum_probs=55.8
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEE-EeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQF-VGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+..+++..|..... ..+.+.+.+..+.+. +.++++ +|... .+ ...+.+.+. .++++.+.+++|+
T Consensus 271 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~------~~~~lw~~~~~~-~~--~l~~~~~~~-----~~~~~~v~~w~pq 335 (456)
T 2c1x_A 271 TSVVYISFGTVTTP-PPAEVVALSEALEAS------RVPFIWSLRDKA-RV--HLPEGFLEK-----TRGYGMVVPWAPQ 335 (456)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHH------TCCEEEECCGGG-GG--GSCTTHHHH-----HTTTEEEESCCCH
T ss_pred cceEEEecCccccC-CHHHHHHHHHHHHhc------CCeEEEEECCcc-hh--hCCHHHHhh-----cCCceEEecCCCH
Confidence 34666777877643 334444555545433 444444 44321 00 000112221 1368999999986
Q ss_pred HHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
. ++|. ++|++|.- +-..+++||+++|+|.|+-
T Consensus 336 ~---~vL~h~~~~~fvth----~G~~S~~Eal~~GvP~i~~ 369 (456)
T 2c1x_A 336 A---EVLAHEAVGAFVTH----CGWNSLWESVAGGVPLICR 369 (456)
T ss_dssp H---HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred H---HHhcCCcCCEEEec----CCcchHHHHHHhCceEEec
Confidence 4 5688 66777753 3356899999999999974
No 60
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=97.36 E-value=0.074 Score=50.15 Aligned_cols=98 Identities=11% Similarity=-0.042 Sum_probs=56.6
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHH-HHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEE-RLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~-~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+.++++..|..... ..+.+.+.+..+.+. +.+++++-+.. ..+ ..+.+.+ + .++|+.+.+++|+
T Consensus 273 ~~vVyvsfGS~~~~-~~~~~~el~~~l~~~------~~~flw~~~~~---~~~~lp~~~~~---~--~~~~~~vv~w~Pq 337 (454)
T 3hbf_A 273 SSVVYISFGSVVTP-PPHELTALAESLEEC------GFPFIWSFRGD---PKEKLPKGFLE---R--TKTKGKIVAWAPQ 337 (454)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHH------CCCEEEECCSC---HHHHSCTTHHH---H--TTTTEEEESSCCH
T ss_pred CceEEEecCCCCcC-CHHHHHHHHHHHHhC------CCeEEEEeCCc---chhcCCHhHHh---h--cCCceEEEeeCCH
Confidence 34566677877643 344455555555443 45555543321 110 0011221 1 2468999999986
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
. +++..+++.++-+. +--.+++||+++|+|.|+-
T Consensus 338 ~---~vL~h~~v~~fvtH--~G~~S~~Eal~~GvP~i~~ 371 (454)
T 3hbf_A 338 V---EILKHSSVGVFLTH--SGWNSVLECIVGGVPMISR 371 (454)
T ss_dssp H---HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEEC
T ss_pred H---HHHhhcCcCeEEec--CCcchHHHHHHcCCCEecC
Confidence 3 67889994443333 2245899999999999974
No 61
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=96.82 E-value=0.36 Score=45.88 Aligned_cols=43 Identities=14% Similarity=-0.127 Sum_probs=30.6
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+...+++|+. ++|+.+++-++-+. +--.+++||+++|+|+|+-
T Consensus 341 ~~v~~w~Pq~---~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~ 383 (480)
T 2vch_A 341 FVIPFWAPQA---QVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAW 383 (480)
T ss_dssp EEEESCCCHH---HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEEC
T ss_pred EEEeCccCHH---HHhCCCCcCeEEec--ccchhHHHHHHcCCCEEec
Confidence 5566799764 68888885333322 2345899999999999973
No 62
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=95.54 E-value=0.42 Score=47.98 Aligned_cols=143 Identities=10% Similarity=0.011 Sum_probs=82.9
Q ss_pred hccCCEEEECChhHHHHHHHHhCCC-CceEEEcCCCCC--CCCccCC-----------CCCCCCCcEEEEEcccCCCC--
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDT--SGLQVLP-----------LERSTEYPAIISVAQFRPEK-- 282 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~-~~~~vi~ngvd~--~~~~~~~-----------~~~~~~~~~il~vgrl~~~K-- 282 (388)
.+..|.+++.|+...+.+.+.++.+ .++ +.-|..- ..+.... .....++.+|+|+-.+....
T Consensus 476 ~~~~D~~~~~s~~~~~~~~~~f~~~~~~i--~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~ 553 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFRSAFWMDEERI--LEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFV 553 (729)
T ss_dssp HTTCSEEEESSHHHHHHHHHHTCCCGGGE--EESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCC
T ss_pred hccCCEEEeCCHHHHHHHHHHhCCCcceE--EEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccc
Confidence 4667999999999999999888864 344 4445421 1111100 01124568899997665431
Q ss_pred -------ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh
Q 016535 283 -------AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG 355 (388)
Q Consensus 283 -------g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ 355 (388)
....-++.+.+ .. .++..+++-. ... +.......+.++.+.-.... .++.++|..
T Consensus 554 ~~~~~~~~~~~~~~~l~~---~l---~~~~~li~r~------Hp~----~~~~~~~~~~~~~~~~~~~~--~di~~ll~~ 615 (729)
T 3l7i_A 554 SKGKYLFELKIDLDNLYK---EL---GDDYVILLRM------HYL----ISNALDLSGYENFAIDVSNY--NDVSELFLI 615 (729)
T ss_dssp GGGSSCCCCTTCHHHHHH---HH---TTTEEEEECC------CHH----HHTTCCCTTCTTTEEECTTC--SCHHHHHHT
T ss_pred cccccccchhhHHHHHHH---Hc---CCCeEEEEec------Ccc----hhccccccccCCcEEeCCCC--cCHHHHHHH
Confidence 11112233332 22 1367776654 221 11111111233444444332 588999999
Q ss_pred CcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 356 AVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 356 adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
||++|- .++-+++|++..++|||-..
T Consensus 616 aD~lIT-----DySSv~fD~~~l~kPiif~~ 641 (729)
T 3l7i_A 616 SDCLIT-----DYSSVMFDYGILKRPQFFFA 641 (729)
T ss_dssp CSEEEE-----SSCTHHHHHGGGCCCEEEEC
T ss_pred hCEEEe-----echHHHHhHHhhCCCEEEec
Confidence 998775 45568999999999999763
No 63
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=94.94 E-value=0.087 Score=44.41 Aligned_cols=42 Identities=10% Similarity=-0.058 Sum_probs=35.6
Q ss_pred cEEEccCCCHHHHHHHHH-hCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 337 NVEFYKNLLYRDLVKLLG-GAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 337 ~V~~~g~v~~~~l~~~~~-~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
++...+++ +++.++|. .||++|.- +-..++.|++++|+|.|.
T Consensus 115 ~v~v~~f~--~~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~Iv 157 (224)
T 2jzc_A 115 KVIGFDFS--TKMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIV 157 (224)
T ss_dssp EEEECCSS--SSHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCE
T ss_pred eEEEeecc--chHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEE
Confidence 56777887 78999999 99998875 445689999999999986
No 64
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=94.38 E-value=0.53 Score=47.07 Aligned_cols=116 Identities=14% Similarity=0.103 Sum_probs=83.9
Q ss_pred CcEEEEEcccCCCCChHH-HHHHHHHH---HHH------hcCC---CCCcEEEEEeCCCCCccHHHHHHHHHHHHhc---
Q 016535 269 YPAIISVAQFRPEKAHPL-QLEAFSVA---LRK------LDAD---LPRPRLQFVGSCRNKSDEERLQSLKDKSIEL--- 332 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~-ll~a~~~l---~~~------~~~~---~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~--- 332 (388)
....+++-|+..+|.+.+ ++..+..+ ++. .... ..++++++.|...+... ..+.+.+++.+.
T Consensus 600 sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~ 677 (879)
T 1ygp_A 600 TLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYY--MAKLIIKLINCVADI 677 (879)
T ss_dssp CEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCH--HHHHHHHHHHHHHHH
T ss_pred eeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHH
Confidence 577889999999999999 56654444 333 1000 13688888887654432 223333333332
Q ss_pred -----CCCC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHHHHHhCCceEeeC
Q 016535 333 -----KVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 333 -----~l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+.+ +|.|+...+-+--..++.+||+-...|. .|..|.+-+-+|..|.+.|++-
T Consensus 678 iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtl 740 (879)
T 1ygp_A 678 VNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTV 740 (879)
T ss_dssp HTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEES
T ss_pred hccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecc
Confidence 2445 7999999988888889999999998875 6999999999999999999884
No 65
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=90.28 E-value=2 Score=40.57 Aligned_cols=98 Identities=8% Similarity=-0.116 Sum_probs=56.5
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC--CccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN--KSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~--~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
.+++++.|.... ...+.+.+.+..+.+. +.+++++-+... .++....+.+.+. .++|+.+.+++|+
T Consensus 296 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~------~~~~l~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~v~~~~pq 363 (482)
T 2pq6_A 296 SVVYVNFGSTTV-MTPEQLLEFAWGLANC------KKSFLWIIRPDLVIGGSVIFSSEFTNE-----IADRGLIASWCPQ 363 (482)
T ss_dssp CEEEEECCSSSC-CCHHHHHHHHHHHHHT------TCEEEEECCGGGSTTTGGGSCHHHHHH-----HTTTEEEESCCCH
T ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhc------CCcEEEEEcCCccccccccCcHhHHHh-----cCCCEEEEeecCH
Confidence 456667777653 2344455555555332 566666543211 0000011233222 2368999999986
Q ss_pred HHHHHHHHhCcE--EEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVV--GIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv--~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
. ++|+.+++ +|.- +-..++.||+++|+|+|+-
T Consensus 364 ~---~~L~h~~~~~~vth----~G~~s~~Eal~~GvP~i~~ 397 (482)
T 2pq6_A 364 D---KVLNHPSIGGFLTH----CGWNSTTESICAGVPMLCW 397 (482)
T ss_dssp H---HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred H---HHhcCCCCCEEEec----CCcchHHHHHHcCCCEEec
Confidence 5 47877665 5542 3356899999999999974
No 66
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=90.08 E-value=6.4 Score=34.42 Aligned_cols=157 Identities=11% Similarity=0.028 Sum_probs=85.7
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCc-cCCCCCCCCCcEEEEEcccCCCCChHHHHHHHH
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ-VLPLERSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~-~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~ 292 (388)
.+++.....|.|+++.....+.+.+... ++-++..+++...-. -........ ..+..+... -.+...++.+.
T Consensus 62 ~~~l~~~~~DlIiai~t~aa~a~~~~~~---~iPVVf~~v~dp~~~~l~~~~~~~g-~nvtGv~~~---~~~~~~l~l~~ 134 (302)
T 3lkv_A 62 ARQFVGENPDVLVGIATPTAQALVSATK---TIPIVFTAVTDPVGAKLVKQLEQPG-KNVTGLSDL---SPVEQHVELIK 134 (302)
T ss_dssp HHHHHTTCCSEEEEESHHHHHHHHHHCS---SSCEEEEEESCTTTTTSCSCSSSCC-SSEEEEECC---CCHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEcCCHHHHHHHhhcC---CCCeEEEecCCcchhhhcccccCCC-CcEEEEECC---cCHHHHHHHHH
Confidence 4566678899999988777777665432 222344444211110 001111112 334444332 23556666666
Q ss_pred HHHHHhcCCCCCc-EEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHH----HHhCcEEEEcCCC--
Q 016535 293 VALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKL----LGGAVVGIHSMID-- 365 (388)
Q Consensus 293 ~l~~~~~~~~~~~-~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~----~~~adv~v~ps~~-- 365 (388)
++. |+. ++.++++..+.......+.+++.++++|+. +......+.+++.+. ....|++..+...
T Consensus 135 ~l~-------P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~l~~~~d~i~~~~d~~~ 205 (302)
T 3lkv_A 135 EIL-------PNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIK--LVEATALKSADVQSATQAIAEKSDVIYALIDNTV 205 (302)
T ss_dssp HHS-------TTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCE--EEEEECSSGGGHHHHHHHHHTTCSEEEECSCHHH
T ss_pred HhC-------CCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCE--EEEEecCChHHHHHHHHhccCCeeEEEEeCCcch
Confidence 662 443 455666543332334567788888888874 555554454555554 4567877776532
Q ss_pred -CCCChHHHHHHHhCCceEeeC
Q 016535 366 -EHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 366 -E~~~~~vlEAma~G~PVI~~~ 386 (388)
........-+..+++||++.+
T Consensus 206 ~~~~~~i~~~~~~~~iPv~~~~ 227 (302)
T 3lkv_A 206 ASAIEGMIVAANQAKTPVFGAA 227 (302)
T ss_dssp HHTHHHHHHHHHHTTCCEEESS
T ss_pred hhHHHHHHHHHhhcCCceeecc
Confidence 122233455678899999865
No 67
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=81.37 E-value=7.3 Score=33.97 Aligned_cols=110 Identities=8% Similarity=-0.019 Sum_probs=70.6
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC-----C
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN-----L 344 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~-----v 344 (388)
-.++-+|.-...++-..+++.+-.+... ++-++.++...... ..++.+.+++..+++|.. +|..+.- .
T Consensus 27 g~l~iiGGgedk~~~~~i~~~~v~lagg-----~~~~I~~IptAs~~-~~~~~~~~~~~f~~lG~~-~v~~L~i~~r~~a 99 (291)
T 3en0_A 27 PAILIIGGAEDKVHGREILQTFWSRSGG-----NDAIIGIIPSASRE-PLLIGERYQTIFSDMGVK-ELKVLDIRDRAQG 99 (291)
T ss_dssp CCEEEECSSCCSSSCCHHHHHHHHHTTG-----GGCEEEEECTTCSS-HHHHHHHHHHHHHHHCCS-EEEECCCCSGGGG
T ss_pred ceEEEEECCCCccChHHHHHHHHHHcCC-----CCCeEEEEeCCCCC-hHHHHHHHHHHHHHcCCC-eeEEEEecCcccc
Confidence 4466666544433445566666555443 45788888765432 346777888888889874 5665532 3
Q ss_pred CHHHHHHHHHhCcEEEEcC--------CCCCCCh--HHHHHHHhC-CceEeeC
Q 016535 345 LYRDLVKLLGGAVVGIHSM--------IDEHFGI--SVVEYMAAG-AIPIGKH 386 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps--------~~E~~~~--~vlEAma~G-~PVI~~~ 386 (388)
+++++.+.+.+||+++++- .+...++ .+-|+...| +|++++.
T Consensus 100 ~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtS 152 (291)
T 3en0_A 100 DDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTS 152 (291)
T ss_dssp GCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEET
T ss_pred CCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeC
Confidence 3567888999999888762 2233333 367888889 8888765
No 68
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=77.46 E-value=7.9 Score=32.40 Aligned_cols=94 Identities=17% Similarity=0.114 Sum_probs=61.3
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCC-CCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEE
Q 016535 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCR-NKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361 (388)
Q Consensus 283 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~-~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ 361 (388)
-++.+.+++..+.+. +-++.++..+. ..+..++...+.+..+++|.+ +...-.. ++..+.+.+||.+++
T Consensus 16 ~l~~~~~~l~~~~~~------~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~--~~~v~~~--~d~~~~l~~ad~I~l 85 (229)
T 1fy2_A 16 WLEHALPLIANQLNG------RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVN--VTGIHRV--ADPLAAIEKAEIIIV 85 (229)
T ss_dssp TTTTTHHHHHHHHTT------CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCE--EEETTSS--SCHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHHhcC------CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCE--EEEEecc--ccHHHHHhcCCEEEE
Confidence 355556667666542 56778887653 222446788888888998863 5544322 345577889999999
Q ss_pred cC--------CCCCCC--hHHHHHHHhCCceEeeC
Q 016535 362 SM--------IDEHFG--ISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 362 ps--------~~E~~~--~~vlEAma~G~PVI~~~ 386 (388)
|- .....| -.+-|+...|+|++++-
T Consensus 86 pGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~s 120 (229)
T 1fy2_A 86 GGGNTFQLLKESRERGLLAPMADRVKRGALYIGWS 120 (229)
T ss_dssp CCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEET
T ss_pred CCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEEC
Confidence 83 112223 34677888999999864
No 69
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=76.41 E-value=19 Score=25.96 Aligned_cols=76 Identities=9% Similarity=0.014 Sum_probs=45.2
Q ss_pred cEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHH--hCCce
Q 016535 305 PRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMA--AGAIP 382 (388)
Q Consensus 305 ~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma--~G~PV 382 (388)
.+.+++.++...-+ -..+++++.+++.+++-.|...+. .++.+.+..+|+++.+...... ..=++..+ .++||
T Consensus 5 mkIlvvC~~G~~TS-ll~~kl~~~~~~~gi~~~i~~~~~---~~~~~~~~~~D~Ii~t~~l~~~-~~~~~~~~~~~~~pv 79 (109)
T 2l2q_A 5 MNILLVCGAGMSTS-MLVQRIEKYAKSKNINATIEAIAE---TRLSEVVDRFDVVLLAPQSRFN-KKRLEEITKPKGIPI 79 (109)
T ss_dssp EEEEEESSSSCSSC-HHHHHHHHHHHHHTCSEEEEEECS---TTHHHHTTTCSEEEECSCCSSH-HHHHHHHHHHHTCCE
T ss_pred eEEEEECCChHhHH-HHHHHHHHHHHHCCCCeEEEEecH---HHHHhhcCCCCEEEECCccHHH-HHHHHHHhcccCCCE
Confidence 44444444323324 556789999999888645555554 5666668899988887644321 23333332 57777
Q ss_pred Eee
Q 016535 383 IGK 385 (388)
Q Consensus 383 I~~ 385 (388)
+.-
T Consensus 80 ~~I 82 (109)
T 2l2q_A 80 EII 82 (109)
T ss_dssp EEC
T ss_pred EEE
Confidence 643
No 70
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=74.50 E-value=16 Score=28.39 Aligned_cols=34 Identities=18% Similarity=-0.032 Sum_probs=23.2
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHH---HHHhCCceEe
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVE---YMAAGAIPIG 384 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlE---Ama~G~PVI~ 384 (388)
.+.+..||++|.--. +.-+-+..| |.+.|+||++
T Consensus 63 ~~~i~~aD~vvA~l~-~~d~Gt~~EiG~A~algkPV~~ 99 (152)
T 4fyk_A 63 LNWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILC 99 (152)
T ss_dssp HHHHHHCSEEEEECS-SCCHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHCCEEEEeCC-CCCCCHHHHHHHHHHcCCeEEE
Confidence 457899998887533 332233444 6789999998
No 71
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=72.66 E-value=1.6 Score=37.74 Aligned_cols=42 Identities=10% Similarity=-0.066 Sum_probs=31.0
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++.+++..+|+++..+..+..--.+..++..|+|+|...++
T Consensus 65 ~dl~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 65 DDIERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp CCHHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCC
T ss_pred CCHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 566777889999998776554333466788999999986553
No 72
>2lk9_A Bone marrow stromal antigen 2; membrane, micelle, antiviral protein-immune system complex; NMR {Homo sapiens}
Probab=71.75 E-value=3.3 Score=22.57 Aligned_cols=28 Identities=18% Similarity=0.171 Sum_probs=11.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhccc
Q 016535 3 PYGILIWAVITAVLASILILASHVHNARR 31 (388)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (388)
|.|+++..++.+|+ +...+...+.|+.|
T Consensus 6 ~lg~Gvl~LLviV~-LgV~LI~f~~kAns 33 (35)
T 2lk9_A 6 LLGIGILVLLIIVI-LGVPLIIFTIKKKK 33 (35)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHC-----
T ss_pred eecccHHHHHHHHH-hcchheEEeeeccc
Confidence 55777774444443 33333334444444
No 73
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=71.03 E-value=3.9 Score=29.63 Aligned_cols=69 Identities=10% Similarity=0.027 Sum_probs=43.3
Q ss_pred EEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCC-----------CCChHHHHH
Q 016535 307 LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE-----------HFGISVVEY 375 (388)
Q Consensus 307 l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E-----------~~~~~vlEA 375 (388)
++++|+|-. ..-..+++++.+++.|++-.|.-.+. .++.+....+|+++..+... ..|..++..
T Consensus 7 ll~Cg~G~s--TS~l~~k~~~~~~~~gi~~~i~a~~~---~~~~~~~~~~Dvil~~pqv~~~~~~~~~~~~~~~v~vI~~ 81 (106)
T 1e2b_A 7 YLFSSAGMS--TSLLVSKMRAQAEKYEVPVIIEAFPE---TLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDS 81 (106)
T ss_dssp EEECSSSTT--THHHHHHHHHHHHHSCCSEEEEEECS---SSTTHHHHHCSEEEECTTSGGGHHHHHHHSSSSCCCBCCH
T ss_pred EEECCCchh--HHHHHHHHHHHHHHCCCCeEEEEecH---HHHHhhccCCCEEEEccchhhhHHHHHHHhcCCCceEECH
Confidence 455555532 23566789999999999855555444 45555678899888765321 345555555
Q ss_pred HHhCC
Q 016535 376 MAAGA 380 (388)
Q Consensus 376 ma~G~ 380 (388)
+.+|.
T Consensus 82 ~~yg~ 86 (106)
T 1e2b_A 82 LLYGK 86 (106)
T ss_dssp HHHTT
T ss_pred HHccC
Confidence 55553
No 74
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=68.50 E-value=23 Score=27.22 Aligned_cols=60 Identities=10% Similarity=0.099 Sum_probs=41.4
Q ss_pred HHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh----Cc-EEEEcCCCCCCChHHHHHHH----hCCceE
Q 016535 322 LQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG----AV-VGIHSMIDEHFGISVVEYMA----AGAIPI 383 (388)
Q Consensus 322 ~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~----ad-v~v~ps~~E~~~~~vlEAma----~G~PVI 383 (388)
.+.+++.++++|+. +.|.-.=...++.+.+++ +| +.+.|--+-..+.++..|++ .+.|+|
T Consensus 35 ~~~l~~~a~~~g~~--v~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~l~~~~~P~V 103 (151)
T 3u80_A 35 RKLCAEWGKDLGLE--VEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLM 103 (151)
T ss_dssp HHHHHHHHHHTTEE--EEEEECSCHHHHHHHHHHHHHHTCCEEEECTTCCSCCHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHcCCE--EEEEecCCHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHHHhhcCCCEE
Confidence 34556666666654 666655555666665554 45 77789888899999999944 489987
No 75
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=67.59 E-value=12 Score=33.39 Aligned_cols=68 Identities=9% Similarity=0.033 Sum_probs=44.3
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+.+. +.+ ..++.+++++.+ ++ + +++.+++.. .|+++.++....=.-.+.+|+.+|+
T Consensus 47 ~~~~lvav~d~----~~~---~a~~~a~~~g~~-~~--y-----~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGk 111 (350)
T 4had_A 47 ENCVVTAIASR----DLT---RAREMADRFSVP-HA--F-----GSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGK 111 (350)
T ss_dssp SSEEEEEEECS----SHH---HHHHHHHHHTCS-EE--E-----SSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCeEEEEEECC----CHH---HHHHHHHHcCCC-ee--e-----CCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCC
Confidence 78888866643 332 567778888765 22 1 345556654 6877776654433334689999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 112 hVl~E 116 (350)
T 4had_A 112 HVVCE 116 (350)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99874
No 76
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=64.79 E-value=67 Score=28.91 Aligned_cols=88 Identities=9% Similarity=0.020 Sum_probs=51.6
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEc
Q 016535 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHS 362 (388)
Q Consensus 283 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~p 362 (388)
++..+++.+..+.... .+-+..++............+.+.+.+++.+..-.+.-....+.+++.+.+..+|++++.
T Consensus 235 ~~~~~~~~~~~~~~~~----~~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii~g 310 (402)
T 1e5d_A 235 QCTFAVQKYVEYAEQK----PTNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKACHHSQIMSEISDAGAVIVG 310 (402)
T ss_dssp HHHHHHHHHHHHHHCC----CCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETTTSCHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHhcCC----CCCcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHHCCEEEEE
Confidence 4667777766665542 245677777654333333455566555555543233334555567777778999977764
Q ss_pred --CCCCCCChHHHH
Q 016535 363 --MIDEHFGISVVE 374 (388)
Q Consensus 363 --s~~E~~~~~vlE 374 (388)
++.++.+-.+.+
T Consensus 311 sp~~~~~~~~~~~~ 324 (402)
T 1e5d_A 311 SPTHNNGILPYVAG 324 (402)
T ss_dssp CCCBTTBCCHHHHH
T ss_pred CCccCCCchHHHHH
Confidence 466766665433
No 77
>3lzd_A DPH2; diphthamide biosynthesis, radical SAM enzyme, gene triplicat iron-sulfur cluster, biosynthetic protein; 2.10A {Pyrococcus horikoshii} PDB: 3lzc_A
Probab=64.45 E-value=5.3 Score=36.19 Aligned_cols=58 Identities=5% Similarity=-0.052 Sum_probs=47.3
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcC
Q 016535 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSM 363 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps 363 (388)
+.-=+++|.-.-+...+..+.+++++++.|..-.+...|.++.+.+..+ ..|++|..+
T Consensus 265 ~~~GIIvgTLg~Q~~~~~~~~L~~ll~~~Gkk~y~i~vg~inp~KLanF--~iD~fV~va 322 (378)
T 3lzd_A 265 KKFGVIVSIKKGQLRLAEAKRIVKLLKKHGREARLIVMNDVNYHKLEGF--PFEAYVVVA 322 (378)
T ss_dssp CEEEEEEECSTTTCCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHTTS--CCSEEEECS
T ss_pred CEEEEEEeCCccCCCHHHHHHHHHHHHHcCCcEEEEEeCCCCHHHHhCC--CCCEEEEec
Confidence 5566888886666677888999999999998766777899998888876 599999875
No 78
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=63.27 E-value=12 Score=22.14 Aligned_cols=10 Identities=0% Similarity=-0.124 Sum_probs=4.2
Q ss_pred HHHHhhcccC
Q 016535 23 ASHVHNARRN 32 (388)
Q Consensus 23 ~~~~~~~~~~ 32 (388)
++.++|+|.+
T Consensus 32 ~~~~RRr~~~ 41 (44)
T 2ks1_B 32 GLFMRRRHIV 41 (44)
T ss_dssp HHHHHTTTCC
T ss_pred HHHhhhhHhh
Confidence 3444444433
No 79
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=62.86 E-value=2.7 Score=36.62 Aligned_cols=41 Identities=7% Similarity=-0.203 Sum_probs=28.6
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.+++..+|+.|-.|..+..--.+..+...|+|+|...+
T Consensus 80 ~dl~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTT 120 (288)
T 3ijp_A 80 DDPESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTT 120 (288)
T ss_dssp SCHHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCC
T ss_pred CCHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 46677778999998766554432335667889999988554
No 80
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=62.19 E-value=20 Score=33.21 Aligned_cols=77 Identities=14% Similarity=-0.088 Sum_probs=45.5
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+..+++.+..+++++++--.+.+ +.+++.+++. ..|+++..+....-.-.+++|+.+|+
T Consensus 43 ~~~~lvav~d~----~~~~~~~~a~~~~~~g~~~~~~~~~--~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aGk 116 (444)
T 2ixa_A 43 DDVEIVAFADP----DPYMVGRAQEILKKNGKKPAKVFGN--GNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGK 116 (444)
T ss_dssp TTEEEEEEECS----CHHHHHHHHHHHHHTTCCCCEEECS--STTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEEeC----CHHHHHHHHHHHHhcCCCCCceecc--CCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCC
Confidence 67888766543 4443444444444556542223332 1246677777 47877776654333344678999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 117 hV~~E 121 (444)
T 2ixa_A 117 IVGME 121 (444)
T ss_dssp EEEEC
T ss_pred eEEEe
Confidence 99874
No 81
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=61.77 E-value=38 Score=29.80 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=25.4
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
||+.|||+|+ |...+.....++|.+.| ++|..+.+.+
T Consensus 1 ~~~mmrIvf~--------Gtp~fa~~~L~~L~~~~--~~v~~Vvt~p 37 (317)
T 3rfo_A 1 SNAMIKVVFM--------GTPDFSVPVLRRLIEDG--YDVIGVVTQP 37 (317)
T ss_dssp CCTTSEEEEE--------CCSTTHHHHHHHHHHTT--CEEEEEECCC
T ss_pred CCCceEEEEE--------eCCHHHHHHHHHHHHCC--CcEEEEEeCC
Confidence 6888999998 44445556678888888 6666554443
No 82
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=61.15 E-value=14 Score=21.78 Aligned_cols=9 Identities=11% Similarity=-0.038 Sum_probs=3.7
Q ss_pred HHHhhcccC
Q 016535 24 SHVHNARRN 32 (388)
Q Consensus 24 ~~~~~~~~~ 32 (388)
+.++|+|.+
T Consensus 32 ~~~RRRr~~ 40 (44)
T 2l2t_A 32 VYVRRKSIK 40 (44)
T ss_dssp HHHHTTCSS
T ss_pred HHhhhhhhh
Confidence 333444433
No 83
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=60.80 E-value=38 Score=29.90 Aligned_cols=79 Identities=10% Similarity=-0.022 Sum_probs=53.3
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+...+.|+|-+ ..=...++.++..+ .+.+.+++......+.+..+..++.+++.|.. +... +
T Consensus 156 ~glkva~vGD~--~rva~Sl~~~~~~~---------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~--v~~~-----~ 217 (323)
T 3gd5_A 156 AGLKLAYVGDG--NNVAHSLLLGCAKV---------GMSIAVATPEGFTPDPAVSARASEIAGRTGAE--VQIL-----R 217 (323)
T ss_dssp TTCEEEEESCC--CHHHHHHHHHHHHH---------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCC--EEEE-----S
T ss_pred CCCEEEEECCC--CcHHHHHHHHHHHc---------CCEEEEECCCcccCCHHHHHHHHHHHHHcCCe--EEEE-----C
Confidence 34779999976 11134566666555 78999999865555566666666766666643 5543 4
Q ss_pred HHHHHHHhCcEEEEcCC
Q 016535 348 DLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~ 364 (388)
++.+.++.||++....|
T Consensus 218 d~~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 218 DPFEAARGAHILYTDVW 234 (323)
T ss_dssp CHHHHHTTCSEEEECCC
T ss_pred CHHHHhcCCCEEEEece
Confidence 56778999998877655
No 84
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=59.96 E-value=15 Score=21.74 Aligned_cols=11 Identities=0% Similarity=0.051 Sum_probs=4.7
Q ss_pred HHHHhhcccCc
Q 016535 23 ASHVHNARRNR 33 (388)
Q Consensus 23 ~~~~~~~~~~~ 33 (388)
++.++|+|-++
T Consensus 32 ~~~~RRR~~~~ 42 (44)
T 2jwa_A 32 GILIKRRQQKI 42 (44)
T ss_dssp HHHHHHHCSCC
T ss_pred Hhheehhhhhc
Confidence 33345544433
No 85
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=59.70 E-value=41 Score=29.42 Aligned_cols=79 Identities=10% Similarity=-0.069 Sum_probs=52.0
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
...+.++|-. ...=...++.++..+ ++.+.++|......+.+..+..++.+++.|.. +.+. ++
T Consensus 148 gl~va~vGD~-~~rva~Sl~~~~~~~---------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~--~~~~-----~d 210 (307)
T 2i6u_A 148 GLRLSYFGDG-ANNMAHSLLLGGVTA---------GIHVTVAAPEGFLPDPSVRAAAERRAQDTGAS--VTVT-----AD 210 (307)
T ss_dssp TCEEEEESCT-TSHHHHHHHHHHHHT---------TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCC--EEEE-----SC
T ss_pred CeEEEEECCC-CcCcHHHHHHHHHHC---------CCEEEEECCccccCCHHHHHHHHHHHHHcCCe--EEEE-----EC
Confidence 4779999985 222223344554444 78999999865555555556667777777743 5544 46
Q ss_pred HHHHHHhCcEEEEcCC
Q 016535 349 LVKLLGGAVVGIHSMI 364 (388)
Q Consensus 349 l~~~~~~adv~v~ps~ 364 (388)
+.+.++.||++....|
T Consensus 211 ~~eav~~aDvvy~~~w 226 (307)
T 2i6u_A 211 AHAAAAGADVLVTDTW 226 (307)
T ss_dssp HHHHHTTCSEEEECCS
T ss_pred HHHHhcCCCEEEecce
Confidence 6778999998887665
No 86
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=58.75 E-value=34 Score=26.32 Aligned_cols=60 Identities=12% Similarity=0.108 Sum_probs=40.9
Q ss_pred HHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC----c-EEEEcCCCCCCChHHHHHH-HhCCceE
Q 016535 322 LQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA----V-VGIHSMIDEHFGISVVEYM-AAGAIPI 383 (388)
Q Consensus 322 ~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a----d-v~v~ps~~E~~~~~vlEAm-a~G~PVI 383 (388)
.+.+++.++++|++ +.|.-.=...++.+.+++| | +.+.|--+-..+.++..|+ +.+.|+|
T Consensus 38 ~~~l~~~a~~~g~~--~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~~~~P~V 103 (153)
T 3lwz_A 38 VSQLEIQAQGMDVA--LSHLQSNAEHALIDSIHQARGNTDFILINPAAFTHTSVALRDALLGVQIPFI 103 (153)
T ss_dssp HHHHHHHHHHTTEE--EEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGGGTCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHcCCE--EEEEecCCHHHHHHHHHHhhhcCceEEEccccceechHHHHHHHHhcCCCEE
Confidence 45566666666654 6666555566666665554 4 6677888888899998887 4578876
No 87
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=58.73 E-value=32 Score=26.99 Aligned_cols=58 Identities=14% Similarity=0.055 Sum_probs=32.5
Q ss_pred HHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh----Cc-EEEEcCCCCCCChHHHHHH-HhCCceE
Q 016535 324 SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG----AV-VGIHSMIDEHFGISVVEYM-AAGAIPI 383 (388)
Q Consensus 324 ~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~----ad-v~v~ps~~E~~~~~vlEAm-a~G~PVI 383 (388)
.+++.++++|++ +.|.-.=...++.+.+++ +| +++.|--+-..+.++..|+ +.+.|+|
T Consensus 61 ~l~~~a~~~G~~--l~~~QSN~EGeLId~Ih~A~~~~dgIIINPgAyTHtSvAlrDAL~~v~~P~V 124 (172)
T 3n8k_A 61 LIEREAAELGLK--AVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLI 124 (172)
T ss_dssp HHHHHHHHTTCE--EEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHcCCE--EEEEecCCHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHhCCCCEE
Confidence 344444444443 444443334444444333 44 6667777777888888887 4466765
No 88
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=58.24 E-value=44 Score=29.68 Aligned_cols=118 Identities=11% Similarity=-0.025 Sum_probs=71.4
Q ss_pred CCEEEE--CChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC----------CCCCCCcEEEEEcccCCCCC-hHHHH
Q 016535 222 ADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----------ERSTEYPAIISVAQFRPEKA-HPLQL 288 (388)
Q Consensus 222 a~~ii~--~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~----------~~~~~~~~il~vgrl~~~Kg-~~~ll 288 (388)
+|.|+. .++...+.+.+.- .+-||. +-| ....|... ...-+...+.++|-+ .+ ...++
T Consensus 126 ~D~IviR~~~~~~~~~lA~~~----~vPVIN-ag~-~~~HPtQaLaDl~TI~E~~G~l~glkva~vGD~---~nva~Sl~ 196 (340)
T 4ep1_A 126 IDGIMIRTFSHADVEELAKES----SIPVIN-GLT-DDHHPCQALADLMTIYEETNTFKGIKLAYVGDG---NNVCHSLL 196 (340)
T ss_dssp CSEEEEECSCHHHHHHHHHHC----SSCEEE-EEC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC---CHHHHHHH
T ss_pred CCEEEEecCChhHHHHHHHhC----CCCEEe-CCC-CCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCC---chhHHHHH
Confidence 677766 4555556665543 233454 444 23333210 011345789999976 33 34455
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC
Q 016535 289 EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 289 ~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~ 364 (388)
.++..+ .+.+.++|......+.+..+..++.+++.|.. +.+. +++.+.++.||++....|
T Consensus 197 ~~~~~~---------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~--v~~~-----~d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 197 LASAKV---------GMHMTVATPVGYRPNEEIVKKALAIAKETGAE--IEIL-----HNPELAVNEADFIYTDVW 256 (340)
T ss_dssp HHHHHH---------TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCC--EEEE-----SCHHHHHTTCSEEEECCC
T ss_pred HHHHHc---------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCe--EEEE-----CCHHHHhCCCCEEEecCc
Confidence 666655 78999999865555666666777777777643 5543 456678999998877665
No 89
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=57.60 E-value=14 Score=33.40 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=42.9
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+.+.. ..++.+++++.+ + .+ +++.++++ ..|+++.++....=.-.+.+|+.+|+
T Consensus 55 ~~~~lvav~d~~~~-------~a~~~a~~~g~~-~--~y-----~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGk 119 (393)
T 4fb5_A 55 ERPRLVHLAEANAG-------LAEARAGEFGFE-K--AT-----ADWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGK 119 (393)
T ss_dssp CCCEEEEEECC--T-------THHHHHHHHTCS-E--EE-----SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEECCCHH-------HHHHHHHHhCCC-e--ec-----CCHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCC
Confidence 67888777654222 466777788765 2 22 34555665 46777766654333334789999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 120 hVl~E 124 (393)
T 4fb5_A 120 HVWCE 124 (393)
T ss_dssp EEEEC
T ss_pred eEEEc
Confidence 99874
No 90
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=57.18 E-value=34 Score=26.69 Aligned_cols=46 Identities=11% Similarity=0.053 Sum_probs=27.9
Q ss_pred EEEccCCCHHHHHHHHHh-----Cc-EEEEcCCCCCCChHHHHHH-HhCCceE
Q 016535 338 VEFYKNLLYRDLVKLLGG-----AV-VGIHSMIDEHFGISVVEYM-AAGAIPI 383 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~-----ad-v~v~ps~~E~~~~~vlEAm-a~G~PVI 383 (388)
+.|.-.=...++.+.+++ +| +++.|--+-..+.++..|+ +.+.|+|
T Consensus 61 v~~~QSN~EGeLId~Ih~A~~~~~dgIIINpgAyTHtSvAlrDAL~~v~~P~V 113 (167)
T 3kip_A 61 VLVFQSNTEGFIIDRIHEAKRQGVGFVVINAGAYTHTSVGIRDALLGTAIPFI 113 (167)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCEEEEECGGGGGTCHHHHHHHHHTTCCEE
T ss_pred EEEEecCCHHHHHHHHHHhhhcCccEEEEccccceeccHHHHHHHHhcCCCEE
Confidence 444444344454444443 34 6667777777888888877 4567766
No 91
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=56.82 E-value=76 Score=27.89 Aligned_cols=98 Identities=12% Similarity=0.043 Sum_probs=58.8
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHH----HHHHHHHHHHhcCCCCcEEEccCC
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEE----RLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~----~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
+.+++|+|.- +..+.+++.|.+. ...++.|=..+++..+. ....+.+.+++++++ +.-....
T Consensus 7 ~mrivf~Gt~------~fa~~~L~~L~~~------~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIp--v~~~~~~ 72 (318)
T 3q0i_A 7 SLRIVFAGTP------DFAARHLAALLSS------EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVP--VYQPENF 72 (318)
T ss_dssp CCEEEEECCS------HHHHHHHHHHHTS------SSEEEEEECCCC---------CCCHHHHHHHHTTCC--EECCSCS
T ss_pred CCEEEEEecC------HHHHHHHHHHHHC------CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCC--EEccCcC
Confidence 3678999874 6777888887654 23333333333221110 012567888899887 4434445
Q ss_pred CHHHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 345 LYRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 345 ~~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
..+++.+.+++ .|++|...+..-.+-.+++....|+
T Consensus 73 ~~~~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~ 110 (318)
T 3q0i_A 73 KSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGC 110 (318)
T ss_dssp CSHHHHHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCE
T ss_pred CCHHHHHHHHhcCCCEEEEeCccccCCHHHHhhCcCCE
Confidence 45677777765 6788888776667767766655554
No 92
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=55.75 E-value=32 Score=26.86 Aligned_cols=37 Identities=11% Similarity=0.026 Sum_probs=25.0
Q ss_pred HHHHHhCcEEEEcCC----CCCCChHHHH---HHHhCCceEeeC
Q 016535 350 VKLLGGAVVGIHSMI----DEHFGISVVE---YMAAGAIPIGKH 386 (388)
Q Consensus 350 ~~~~~~adv~v~ps~----~E~~~~~vlE---Ama~G~PVI~~~ 386 (388)
.+.+..||++|.--. .+.=+-+..| |.+.|+|||+-.
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 578999998876422 1222335555 678999999854
No 93
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=54.49 E-value=1.1e+02 Score=26.74 Aligned_cols=98 Identities=14% Similarity=-0.014 Sum_probs=57.5
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHH----HHHHHHHHHHhcCCCCcEEEccCC
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEE----RLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~----~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
+.+++|+|.- +..+..++.|.+. ...++.|=..+++..+. ....+.+.+++++++ +.-....
T Consensus 3 ~mrIvf~Gt~------~fa~~~L~~L~~~------~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIp--v~~~~~~ 68 (314)
T 1fmt_A 3 SLRIIFAGTP------DFAARHLDALLSS------GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLP--VFQPVSL 68 (314)
T ss_dssp CCEEEEEECS------HHHHHHHHHHHHT------TCEEEEEECCCCBC------CBCCHHHHHHHHTTCC--EECCSCS
T ss_pred CCEEEEEecC------HHHHHHHHHHHHC------CCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCc--EEecCCC
Confidence 3678888863 5667777777664 23333333333322110 002577888888887 4333344
Q ss_pred CHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 345 LYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 345 ~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
.++++.+.++ +.|++|...+..-.|-.+++....|+
T Consensus 69 ~~~~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~ 106 (314)
T 1fmt_A 69 RPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGC 106 (314)
T ss_dssp CSHHHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCE
T ss_pred CCHHHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCE
Confidence 4456666665 46788887776667777777655554
No 94
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=54.40 E-value=62 Score=28.41 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=24.0
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
||..++|.|+ |.+..-+.-+|+.|.++| ++|++.-..
T Consensus 1 ~~~~~~i~~i-------GiGg~Gms~~A~~L~~~G--~~V~~~D~~ 37 (326)
T 3eag_A 1 SNAMKHIHII-------GIGGTFMGGLAAIAKEAG--FEVSGCDAK 37 (326)
T ss_dssp --CCCEEEEE-------SCCSHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred CCCCcEEEEE-------EECHHHHHHHHHHHHhCC--CEEEEEcCC
Confidence 4667788877 333333445788999999 888876543
No 95
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=54.28 E-value=51 Score=29.52 Aligned_cols=120 Identities=9% Similarity=-0.088 Sum_probs=70.9
Q ss_pred CCEEEE--CChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC----------CCCCCCcEEEEEcccCCCCChHHHHH
Q 016535 222 ADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----------ERSTEYPAIISVAQFRPEKAHPLQLE 289 (388)
Q Consensus 222 a~~ii~--~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~----------~~~~~~~~il~vgrl~~~Kg~~~ll~ 289 (388)
+|.|+. .++...+.+.+.- .+-||. +-+ ....|... ...-+...+.|+|-. ...=...++.
T Consensus 123 ~D~IviR~~~~~~~~~lA~~s----~vPVIN-a~~-~~~HPtQaLaDl~Ti~E~~g~l~gl~va~vGD~-~~rva~Sl~~ 195 (359)
T 2w37_A 123 FDGIEFRGFKQSDAEILARDS----GVPVWN-GLT-DEWHPTQMLADFMTVKENFGKLQGLTLTFMGDG-RNNVANSLLV 195 (359)
T ss_dssp CSEEEEESSCHHHHHHHHHHS----SSCEEE-EEC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCT-TSHHHHHHHH
T ss_pred cCEEEEecCChHHHHHHHHhC----CCCEEc-CCC-CCCCccHHHHHHHHHHHHhCCcCCeEEEEECCC-ccchHHHHHH
Confidence 677766 4566666666543 233454 444 33333211 011244789999985 2222234555
Q ss_pred HHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC
Q 016535 290 AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 290 a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~ 364 (388)
+++.+ .+.+.++|......+.+..+..++.+++.|. .+.+. +++.+.++.||++....|
T Consensus 196 ~~~~l---------G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~--~v~~~-----~d~~eav~~aDvvytd~w 254 (359)
T 2w37_A 196 TGAIL---------GVNIHIVAPKALFPTEETQNIAKGFAEKSGA--KLVIT-----DDLDEGLKGSNVVYTDVW 254 (359)
T ss_dssp HHHHH---------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTC--CEEEE-----SCHHHHHTTCSEEEECCS
T ss_pred HHHHc---------CCEEEEECCccccCCHHHHHHHHHHHHHcCC--eEEEE-----eCHHHHhcCCCEEEEccc
Confidence 55555 7899999976444444555566677777764 35554 466778999998877666
No 96
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=54.11 E-value=44 Score=25.50 Aligned_cols=61 Identities=15% Similarity=0.062 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC----c-EEEEcCCCCCCChHHHHHHH-hCCceE
Q 016535 321 RLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA----V-VGIHSMIDEHFGISVVEYMA-AGAIPI 383 (388)
Q Consensus 321 ~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a----d-v~v~ps~~E~~~~~vlEAma-~G~PVI 383 (388)
..+.+++.++++|++ +.|.-.=...++.+.+++| | +.+.|--+-..+..+..|++ .+.|+|
T Consensus 32 i~~~l~~~a~~~g~~--~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~v~~P~V 98 (146)
T 1h05_A 32 LVALIEREAAELGLK--AVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLI 98 (146)
T ss_dssp HHHHHHHHHHHTTCE--EEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHHcCCE--EEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhCCCCEE
Confidence 445566666666654 6666555555665555444 4 67778888788888888875 466665
No 97
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=54.08 E-value=45 Score=25.38 Aligned_cols=62 Identities=11% Similarity=0.181 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC----c-EEEEcCCCCCCChHHHHHHH-hCCceE
Q 016535 320 ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA----V-VGIHSMIDEHFGISVVEYMA-AGAIPI 383 (388)
Q Consensus 320 ~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a----d-v~v~ps~~E~~~~~vlEAma-~G~PVI 383 (388)
+..+.+++.++++|++ +.|.-.=...++.+.+++| | +.+.|--+-..+.++..|++ .+.|+|
T Consensus 29 di~~~l~~~a~~~g~~--~~~~QSN~EgeLid~Ih~a~~~~dgiiiNpgA~THtSvAlrDAl~~v~~P~V 96 (143)
T 1gqo_A 29 DIETDLFQFAEALHIQ--LTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALSHYSYAIRDAVSSISLPVV 96 (143)
T ss_dssp HHHHHHHHHHHHHTCE--EEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEE
T ss_pred HHHHHHHHHHHHcCCE--EEEEeeCCHHHHHHHHHHhhhcCcEEEEccchhccccHHHHHHHHhCCCCEE
Confidence 3445667777777764 7777665666776666654 3 67778888888999988875 466665
No 98
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=53.65 E-value=20 Score=30.29 Aligned_cols=54 Identities=11% Similarity=0.148 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCc
Q 016535 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAV 357 (388)
Q Consensus 288 l~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ad 357 (388)
...|+.++++. +++++++++|+|.+. ++.++.+++| |..--++.|+.+++.+-+
T Consensus 217 esCFerI~~RF---G~k~~yvvIGDG~eE---------e~AAk~~n~P----FwrI~~h~Dl~~l~~al~ 270 (274)
T 3geb_A 217 ESCFERIMQRF---GRKAVYVVIGDGVEE---------EQGAKKHNMP----FWRISCHADLEALRHALE 270 (274)
T ss_dssp HHHHHHHHHHH---CTTSEEEEEESSHHH---------HHHHHHTTCC----EEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---CCCceEEEECCCHHH---------HHHHHHcCCC----eEEeecCccHHHHHHhhc
Confidence 46788888887 589999999987422 3556666665 333334688888877654
No 99
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=53.59 E-value=35 Score=27.90 Aligned_cols=81 Identities=16% Similarity=0.091 Sum_probs=53.2
Q ss_pred CcEEEEEeCCCC-CccHHHHHHHHHHHHhcCCCCcEEEcc--CCCHHHHHHHHHhCcEEEEcC--------CCCCCCh--
Q 016535 304 RPRLQFVGSCRN-KSDEERLQSLKDKSIELKVDGNVEFYK--NLLYRDLVKLLGGAVVGIHSM--------IDEHFGI-- 370 (388)
Q Consensus 304 ~~~l~ivG~~~~-~~~~~~~~~l~~~~~~~~l~~~V~~~g--~v~~~~l~~~~~~adv~v~ps--------~~E~~~~-- 370 (388)
.-++.++..+.. .+..++.+.+++..+++|.+ +..+. .-+.++..+.+.+||++++|- .....|+
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~--v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~~l~~~L~~~gl~~ 104 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLL--VEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADK 104 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCE--EEECCTTTSCHHHHHHHHHHSSEEEECCSCHHHHHHHHHHHTHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCe--EEEEEecCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHHCChHH
Confidence 456777764321 11235778889999999874 55542 124578888999999999883 1111222
Q ss_pred HHHHHHHhCCceEeeC
Q 016535 371 SVVEYMAAGAIPIGKH 386 (388)
Q Consensus 371 ~vlEAma~G~PVI~~~ 386 (388)
.+-|+...|+|++++-
T Consensus 105 ~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 105 LILEEIAAGKLYIGES 120 (206)
T ss_dssp HHHHHHHTTCEEEEET
T ss_pred HHHHHHHcCCeEEEEC
Confidence 3678888899999864
No 100
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=52.83 E-value=17 Score=34.08 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.0
Q ss_pred cceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
.|||.++ |++++=..+++.|.+.| |+|+++-.+
T Consensus 3 ~M~iiI~--------G~G~vG~~la~~L~~~~--~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIIL--------GAGQVGGTLAENLVGEN--NDITIVDKD 35 (461)
T ss_dssp CEEEEEE--------CCSHHHHHHHHHTCSTT--EEEEEEESC
T ss_pred cCEEEEE--------CCCHHHHHHHHHHHHCC--CCEEEEECC
Confidence 6888887 66688889999999999 899998765
No 101
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=51.87 E-value=48 Score=29.11 Aligned_cols=78 Identities=14% Similarity=0.028 Sum_probs=51.1
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
...+.++|-. ..=...++.++..+ .+.+.++|......+.+..+..++.+++.|. .+.+. ++
T Consensus 155 gl~va~vGD~--~rva~Sl~~~~~~~---------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~--~~~~~-----~d 216 (315)
T 1pvv_A 155 GVKVVYVGDG--NNVAHSLMIAGTKL---------GADVVVATPEGYEPDEKVIKWAEQNAAESGG--SFELL-----HD 216 (315)
T ss_dssp TCEEEEESCC--CHHHHHHHHHHHHT---------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTC--EEEEE-----SC
T ss_pred CcEEEEECCC--cchHHHHHHHHHHC---------CCEEEEECCccccCCHHHHHHHHHHHHHcCC--eEEEE-----eC
Confidence 3778999975 11223344444444 7899999986555455555666667777763 35443 46
Q ss_pred HHHHHHhCcEEEEcCC
Q 016535 349 LVKLLGGAVVGIHSMI 364 (388)
Q Consensus 349 l~~~~~~adv~v~ps~ 364 (388)
+.+.++.||++....|
T Consensus 217 ~~eav~~aDvvy~~~w 232 (315)
T 1pvv_A 217 PVKAVKDADVIYTDVW 232 (315)
T ss_dssp HHHHTTTCSEEEECCC
T ss_pred HHHHhCCCCEEEEcce
Confidence 6778999998887665
No 102
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=51.70 E-value=79 Score=24.20 Aligned_cols=62 Identities=13% Similarity=0.132 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC-----c-EEEEcCCCCCCChHHHHHHH-hCCceE
Q 016535 320 ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA-----V-VGIHSMIDEHFGISVVEYMA-AGAIPI 383 (388)
Q Consensus 320 ~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a-----d-v~v~ps~~E~~~~~vlEAma-~G~PVI 383 (388)
+..+.+++.++++|++ +.|.-.=...++.+.+++| | +.+.|--+-..+.++..|++ .+.|+|
T Consensus 28 di~~~l~~~a~~~g~~--v~~~QSN~EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~V 96 (149)
T 2uyg_A 28 ELEALCEAWGAELGLG--VVFRQTNYEGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPVV 96 (149)
T ss_dssp HHHHHHHHHHHHTTCC--EEEEECSCHHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEE
T ss_pred HHHHHHHHHHHHcCCE--EEEEeeCCHHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHhCCCCEE
Confidence 4455677777777765 7777666667777766655 3 66778888888999988875 466665
No 103
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=50.40 E-value=42 Score=25.83 Aligned_cols=61 Identities=11% Similarity=0.103 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC----c-EEEEcCCCCCCChHHHHHHH-hCCceE
Q 016535 321 RLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA----V-VGIHSMIDEHFGISVVEYMA-AGAIPI 383 (388)
Q Consensus 321 ~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a----d-v~v~ps~~E~~~~~vlEAma-~G~PVI 383 (388)
..+.+++.++++|++ +.|.-.=...++.+.+++| | +.+.|--+-..+.++..|++ .+.|+|
T Consensus 31 i~~~l~~~a~~~g~~--l~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~V 97 (154)
T 1uqr_A 31 IEQHLQQSAQAQGYE--LDYFQANGEESLINRIHQAFQNTDFIIINPGAFTHTSVAIRDALLAVSIPFI 97 (154)
T ss_dssp HHHHHHHHHHHTTCE--EEEEECSSHHHHHHHHHHTTTTCCEEEEECTTHHHHCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHCCCE--EEEEeeCCHHHHHHHHHHhhhcCcEEEECcchhccchHHHHHHHHhCCCCEE
Confidence 445566666666654 6666555566666666655 3 56677777777888887764 466765
No 104
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=50.09 E-value=30 Score=31.03 Aligned_cols=77 Identities=12% Similarity=0.012 Sum_probs=50.3
Q ss_pred EEEEcccCCC--CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 272 IISVAQFRPE--KAHPLQLEAFSVALRKLDADLPRPRLQFVGSC-RNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 272 il~vgrl~~~--Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~-~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
+.|+|-+..- .=...++.++..+ .+.+.+++.. ....+.+..+..++.+++.|. .+.+. ++
T Consensus 195 va~vGDl~~~~nrva~Sl~~~~~~~---------G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~--~v~~~-----~d 258 (359)
T 1zq6_A 195 LTWTYHPKPLNTAVANSALTIATRM---------GMDVTLLCPTPDYILDERYMDWAAQNVAESGG--SLQVS-----HD 258 (359)
T ss_dssp EEECCCSSCCCSHHHHHHHHHHHHT---------TCEEEEECSSGGGCCCHHHHHHHHHHHHHHSC--EEEEE-----CC
T ss_pred EEEEecccccccchHHHHHHHHHHc---------CCEEEEEcCccccCCCHHHHHHHHHHHHHcCC--eEEEE-----CC
Confidence 8899986532 2245566666655 7899999975 334445566666777777663 35443 35
Q ss_pred HHHHHHhCcEEEEcCC
Q 016535 349 LVKLLGGAVVGIHSMI 364 (388)
Q Consensus 349 l~~~~~~adv~v~ps~ 364 (388)
+.+.++.||++....|
T Consensus 259 ~~eav~~aDvVyt~~w 274 (359)
T 1zq6_A 259 IDSAYAGADVVYAKSW 274 (359)
T ss_dssp HHHHHTTCSEEEEECC
T ss_pred HHHHhcCCCEEEECCc
Confidence 5678999998776654
No 105
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=50.01 E-value=91 Score=27.29 Aligned_cols=97 Identities=8% Similarity=-0.033 Sum_probs=56.4
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccH----HHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDE----ERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~----~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
.+++|+|.- +..+.+++.|.+.. -++..++. .+++..+ -....+.+.+++++++ |.-.....
T Consensus 3 mrivf~Gtp------~fa~~~L~~L~~~~----~~v~~Vvt--~pd~~~grg~~l~~~~v~~~A~~~gIp--v~~~~~~~ 68 (314)
T 3tqq_A 3 LKIVFAGTP------QFAVPTLRALIDSS----HRVLAVYT--QPDRPSGRGQKIMESPVKEIARQNEIP--IIQPFSLR 68 (314)
T ss_dssp CEEEEEECS------GGGHHHHHHHHHSS----SEEEEEEC--CCC----------CCHHHHHHHHTTCC--EECCSCSS
T ss_pred cEEEEECCC------HHHHHHHHHHHHCC----CeEEEEEe--CCCCccccCCccCCCHHHHHHHHcCCC--EECcccCC
Confidence 568888874 56677777776642 23444333 2222111 0112567888888887 44344454
Q ss_pred HHHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 346 YRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 346 ~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
.+++.+.+++ .|++|...+..-.+-.+++....|+
T Consensus 69 ~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~ 105 (314)
T 3tqq_A 69 DEVEQEKLIAMNADVMVVVAYGLILPKKALNAFRLGC 105 (314)
T ss_dssp SHHHHHHHHTTCCSEEEEESCCSCCCHHHHTSSTTCE
T ss_pred CHHHHHHHHhcCCCEEEEcCcccccCHHHHhhCcCCE
Confidence 5567776754 6788877766666666666554443
No 106
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=49.87 E-value=77 Score=28.14 Aligned_cols=71 Identities=11% Similarity=-0.039 Sum_probs=44.2
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++.+-+. +.+ ..++.+++++++..+... +++.+++. ..|+++..+....-.-.+.+|+.+|+
T Consensus 29 ~~~~lv~v~d~----~~~---~~~~~a~~~~~~~~~~~~-----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk 96 (362)
T 1ydw_A 29 PNATISGVASR----SLE---KAKAFATANNYPESTKIH-----GSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGK 96 (362)
T ss_dssp TTEEEEEEECS----SHH---HHHHHHHHTTCCTTCEEE-----SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTC
T ss_pred CCcEEEEEEcC----CHH---HHHHHHHHhCCCCCCeee-----CCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCC
Confidence 57777665543 322 456667777753223333 34555665 58988877655443445678999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 97 ~V~~E 101 (362)
T 1ydw_A 97 HILLE 101 (362)
T ss_dssp EEEEC
T ss_pred eEEEe
Confidence 99974
No 107
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=49.52 E-value=51 Score=28.91 Aligned_cols=69 Identities=10% Similarity=0.030 Sum_probs=42.9
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++.+ . . .+++.+++. .+|+++..+....-.-.+.+|+.+|+
T Consensus 28 ~~~~l~av~d~----~~~---~~~~~~~~~~~~-~----~---~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk 92 (330)
T 3e9m_A 28 AQAEVRGIASR----RLE---NAQKMAKELAIP-V----A---YGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGK 92 (330)
T ss_dssp SSEEEEEEBCS----SSH---HHHHHHHHTTCC-C----C---BSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEEeC----CHH---HHHHHHHHcCCC-c----e---eCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCC
Confidence 57777655432 221 456666776653 1 1 245666777 78987776654433334678999999
Q ss_pred ceEeeC
Q 016535 381 IPIGKH 386 (388)
Q Consensus 381 PVI~~~ 386 (388)
+|++-.
T Consensus 93 ~vl~EK 98 (330)
T 3e9m_A 93 PVLLEK 98 (330)
T ss_dssp CEEECS
T ss_pred eEEEeC
Confidence 999743
No 108
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=48.83 E-value=51 Score=29.19 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=51.3
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l 349 (388)
..+.|+|-. ...=...++.++..+ .+.+.+++......+.+..+..++.+++.|. ++.+. +++
T Consensus 156 l~ia~vGD~-~~~va~Sl~~~~~~~---------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~--~v~~~-----~d~ 218 (333)
T 1duv_G 156 MTLVYAGDA-RNNMGNSMLEAAALT---------GLDLRLVAPQACWPEAALVTECRALAQQNGG--NITLT-----EDV 218 (333)
T ss_dssp CEEEEESCT-TSHHHHHHHHHHHHH---------CCEEEEECCGGGCCCHHHHHHHHHHHHHTTC--EEEEE-----SCH
T ss_pred cEEEEECCC-ccchHHHHHHHHHHc---------CCEEEEECCcccCCCHHHHHHHHHHHHHcCC--eEEEE-----ECH
Confidence 779999975 222224455555555 7899999975444444555566777777763 35544 456
Q ss_pred HHHHHhCcEEEEcCC
Q 016535 350 VKLLGGAVVGIHSMI 364 (388)
Q Consensus 350 ~~~~~~adv~v~ps~ 364 (388)
.+.++.||++....|
T Consensus 219 ~eav~~aDvvytd~w 233 (333)
T 1duv_G 219 AKGVEGADFIYTDVW 233 (333)
T ss_dssp HHHHTTCSEEEECCS
T ss_pred HHHhCCCCEEEeCCc
Confidence 778999998887665
No 109
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=48.21 E-value=21 Score=30.77 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=27.4
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
|||++. ||.+-+=..|++.|.++| |+|++++...
T Consensus 1 MkILVT-------GatGfIG~~L~~~L~~~G--~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVG-------GGTGFIGTALTQLLNARG--HEVTLVSRKP 34 (298)
T ss_dssp CEEEEE-------TTTSHHHHHHHHHHHHTT--CEEEEEESSC
T ss_pred CEEEEE-------CCCCHHHHHHHHHHHHCC--CEEEEEECCC
Confidence 666665 687888889999999999 8888887653
No 110
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=47.51 E-value=33 Score=26.06 Aligned_cols=40 Identities=10% Similarity=0.066 Sum_probs=29.9
Q ss_pred cceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceE-EEEec
Q 016535 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDC-IVYTG 75 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v-~v~~~ 75 (388)
.|+++|+.-..+.|.-..+..+++++++.+.| ++| .++--
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g--~eV~~VFf~ 52 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADG--HELSSVFFY 52 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTT--CEEEEEEEC
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCC--CccCEEEEe
Confidence 57788776555555577788899999999999 666 55543
No 111
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=47.23 E-value=53 Score=28.98 Aligned_cols=80 Identities=15% Similarity=0.134 Sum_probs=51.0
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+...+.++|-. ++ .....+..+..+. .+.+.++|......+.+..+..++.+++.|. .+.+. +
T Consensus 166 ~gl~va~vGD~---~~--rva~Sl~~~~~~~-----G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~--~v~~~-----~ 228 (325)
T 1vlv_A 166 KGVKVVFMGDT---RN--NVATSLMIACAKM-----GMNFVACGPEELKPRSDVFKRCQEIVKETDG--SVSFT-----S 228 (325)
T ss_dssp TTCEEEEESCT---TS--HHHHHHHHHHHHT-----TCEEEEESCGGGCCCHHHHHHHHHHHHHHCC--EEEEE-----S
T ss_pred CCcEEEEECCC---Cc--CcHHHHHHHHHHC-----CCEEEEECCccccCCHHHHHHHHHHHHHcCC--eEEEE-----c
Confidence 34789999973 11 3334344444442 7899999975444444555566677777763 35444 4
Q ss_pred HHHHHHHhCcEEEEcCC
Q 016535 348 DLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~ 364 (388)
++.+.++.||++....|
T Consensus 229 d~~eav~~aDvvyt~~w 245 (325)
T 1vlv_A 229 NLEEALAGADVVYTDVW 245 (325)
T ss_dssp CHHHHHTTCSEEEECCC
T ss_pred CHHHHHccCCEEEeccc
Confidence 66778999998887665
No 112
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=47.11 E-value=59 Score=29.55 Aligned_cols=100 Identities=15% Similarity=0.037 Sum_probs=56.5
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
++.++..+|-=.-- ..-++++..+........++++++-+.+. +.+ ..++.+++++.+ + .+ .
T Consensus 25 ~klrvgiIG~G~ig---~~h~~~~~~~~~~~~~~~~~~elvav~d~----~~~---~a~~~a~~~~~~-~--~y-----~ 86 (412)
T 4gqa_A 25 ARLNIGLIGSGFMG---QAHADAYRRAAMFYPDLPKRPHLYALADQ----DQA---MAERHAAKLGAE-K--AY-----G 86 (412)
T ss_dssp CEEEEEEECCSHHH---HHHHHHHHHHHHHCTTSSSEEEEEEEECS----SHH---HHHHHHHHHTCS-E--EE-----S
T ss_pred ccceEEEEcCcHHH---HHHHHHHHhccccccccCCCeEEEEEEcC----CHH---HHHHHHHHcCCC-e--EE-----C
Confidence 34677777631111 23456666664432111134566655543 332 566777788764 2 22 3
Q ss_pred HHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 348 DLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++.+++. ..|+++..+....-.-.+++|+.+|++|++-
T Consensus 87 d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~E 126 (412)
T 4gqa_A 87 DWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCE 126 (412)
T ss_dssp SHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcCCCeEee
Confidence 4555665 4677776655443334578999999999874
No 113
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=46.86 E-value=37 Score=29.87 Aligned_cols=69 Identities=14% Similarity=0.067 Sum_probs=40.2
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+.+. + ..++.+++++.+ .+ ..++.+++. ..|+++..+....-.-.+.+|+.+|+
T Consensus 28 ~~~~~~av~d~~~-~------~~~~~a~~~~~~-~~-------~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk 92 (329)
T 3evn_A 28 GNGEVVAVSSRTL-E------SAQAFANKYHLP-KA-------YDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGK 92 (329)
T ss_dssp CSEEEEEEECSCS-S------TTCC---CCCCS-CE-------ESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEEcCCH-H------HHHHHHHHcCCC-cc-------cCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCC
Confidence 6777776654322 1 234445555543 11 145566777 78988777655433345678999999
Q ss_pred ceEeeC
Q 016535 381 IPIGKH 386 (388)
Q Consensus 381 PVI~~~ 386 (388)
+|++-.
T Consensus 93 ~Vl~EK 98 (329)
T 3evn_A 93 HVLVEK 98 (329)
T ss_dssp EEEEES
T ss_pred eEEEcc
Confidence 999743
No 114
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=46.34 E-value=94 Score=24.17 Aligned_cols=35 Identities=17% Similarity=-0.051 Sum_probs=23.9
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHH---HHHhCCceEee
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVE---YMAAGAIPIGK 385 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlE---Ama~G~PVI~~ 385 (388)
.+.+..||++|.--. +.-.-+.+| |.+.|+|||+.
T Consensus 72 ~~~i~~aD~vva~~~-~~d~Gt~~EiGyA~algKPVi~l 109 (165)
T 2khz_A 72 LNWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILCL 109 (165)
T ss_dssp HHHHHHCSEEEEECS-SCCHHHHHHHHHHHHTCSSEEEE
T ss_pred HHHHHhCCEEEEECC-CCCCCHHHHHHHHHHCCCEEEEE
Confidence 368999998776322 333344555 67899999985
No 115
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=45.84 E-value=59 Score=28.68 Aligned_cols=69 Identities=12% Similarity=0.101 Sum_probs=43.0
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.++++++. +... +++.+++.. .|+++..+....-.-.+.+|+.+|+
T Consensus 26 ~~~~l~av~d~----~~~---~~~~~~~~~g~~--~~~~-----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk 91 (344)
T 3mz0_A 26 SGAEIVAVTDV----NQE---AAQKVVEQYQLN--ATVY-----PNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQK 91 (344)
T ss_dssp SSEEEEEEECS----SHH---HHHHHHHHTTCC--CEEE-----SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEEcC----CHH---HHHHHHHHhCCC--Ceee-----CCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCC
Confidence 67777755432 322 556667777642 2222 345566665 8888877654443445678999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 92 ~vl~E 96 (344)
T 3mz0_A 92 YVFCE 96 (344)
T ss_dssp EEEEC
T ss_pred cEEEc
Confidence 99974
No 116
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=45.54 E-value=69 Score=27.21 Aligned_cols=32 Identities=13% Similarity=-0.137 Sum_probs=14.8
Q ss_pred CcEEEE-cCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 356 AVVGIH-SMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 356 adv~v~-ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.|.++. |...+...-.+-++...|.|||+.|.
T Consensus 62 vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 62 PSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp CSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 454443 32333333334445556666666543
No 117
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=45.22 E-value=20 Score=30.87 Aligned_cols=80 Identities=11% Similarity=-0.007 Sum_probs=49.2
Q ss_pred ccCCCCC-hHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCcc--HHHHHHHHHHHHh-cCCCCcEE-EccCCCHHHHHH
Q 016535 277 QFRPEKA-HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD--EERLQSLKDKSIE-LKVDGNVE-FYKNLLYRDLVK 351 (388)
Q Consensus 277 rl~~~Kg-~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~--~~~~~~l~~~~~~-~~l~~~V~-~~g~v~~~~l~~ 351 (388)
-++|.|- .+.+.+.++.+.+. ..-.+++| ...- . .+...++.+.+++ ..++ -|. |.+.++ +...
T Consensus 44 liDPdK~~~~~~~~~~~~~~~s------GtDai~VG-S~~v-t~~~~~~~~~v~~ik~~~~lP-vil~fPP~~g--~~~~ 112 (286)
T 3vk5_A 44 IIDPFKVPVTEAVEKAAELTRL------GFAAVLLA-STDY-ESFESHMEPYVAAVKAATPLP-VVLHFPPRPG--AGFP 112 (286)
T ss_dssp EECTTTSCHHHHHHHHHHHHHT------TCSCEEEE-CSCC-SSHHHHHHHHHHHHHHHCSSC-EEEECCCBTT--TBSC
T ss_pred EECCCCCCcHHHHHHHHHHHhc------CCCEEEEc-cCCC-CcchHHHHHHHHHHHHhCCCC-EEEECCCCCC--Cccc
Confidence 6788874 45555666666554 56678889 3212 2 4445566666666 7787 444 662331 1233
Q ss_pred HHHhCcEEEEcCCCCC
Q 016535 352 LLGGAVVGIHSMIDEH 367 (388)
Q Consensus 352 ~~~~adv~v~ps~~E~ 367 (388)
+-..+|++++||...+
T Consensus 113 i~~~aDa~l~psvlNs 128 (286)
T 3vk5_A 113 VVRGADALLLPALLGS 128 (286)
T ss_dssp CCTTCSEEEEEEETTB
T ss_pred cccCCCEEEEEEEecC
Confidence 4679999999986543
No 118
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=44.67 E-value=1.4e+02 Score=25.98 Aligned_cols=96 Identities=15% Similarity=0.037 Sum_probs=52.1
Q ss_pred EEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHH-HHHHHHHHHHhcCCCCcEEEccCCCHHHH
Q 016535 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEE-RLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (388)
Q Consensus 271 ~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~l 349 (388)
++++.|. .+.....++.|.+.. -++..++ +.+++..+. ....+.+.+++++++ +........+++
T Consensus 2 rivf~gt------~~fa~~~L~~L~~~~----~~i~~Vv--t~~d~~~g~~~~~~v~~~A~~~gIp--v~~~~~~~~~~~ 67 (305)
T 2bln_A 2 KTVVFAY------HDMGCLGIEALLAAG----YEISAIF--THTDNPGEKAFYGSVARLAAERGIP--VYAPDNVNHPLW 67 (305)
T ss_dssp EEEEEEC------HHHHHHHHHHHHHTT----CEEEEEE--CCCC------CCCCHHHHHHHHTCC--EECCSCCCSHHH
T ss_pred EEEEEEc------CHHHHHHHHHHHHCC----CcEEEEE--cCCCCCCCCcCccHHHHHHHHcCCC--EECCCcCCcHHH
Confidence 3555564 255566677766542 2333333 333221000 001367788888887 555555555566
Q ss_pred HHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 350 VKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 350 ~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
.+.++ +.|++|...+..-.|-.+++....|+
T Consensus 68 ~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~ 100 (305)
T 2bln_A 68 VERIAQLSPDVIFSFYYRHLIYDEILQLAPAGA 100 (305)
T ss_dssp HHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCE
T ss_pred HHHHHhcCCCEEEEeccccccCHHHHhcCcCCE
Confidence 66655 46788777766666666666555544
No 119
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=44.35 E-value=45 Score=28.04 Aligned_cols=46 Identities=15% Similarity=0.171 Sum_probs=33.3
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
..++++..+|+++.|..... --..++..+.+++.+.| +++.++...
T Consensus 2 ~L~~~~~~~Igvi~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 47 (277)
T 3cs3_A 2 SLKRRQTNIIGVYLADYGGS-FYGELLEGIKKGLALFD--YEMIVCSGK 47 (277)
T ss_dssp --CCCCCCEEEEEECSSCTT-THHHHHHHHHHHHHTTT--CEEEEEEST
T ss_pred CccccCCcEEEEEecCCCCh-hHHHHHHHHHHHHHHCC--CeEEEEeCC
Confidence 34667788999999987544 55667777888888999 777776554
No 120
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=43.99 E-value=1.2e+02 Score=25.76 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 016535 284 HPLQLEAFSVALRKLDADLPRPRLQFVG 311 (388)
Q Consensus 284 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG 311 (388)
...+++.+....++. ++.+.+..
T Consensus 19 ~~~~~~gi~~~a~~~-----g~~~~~~~ 41 (305)
T 3g1w_A 19 WKRCLKGFEDAAQAL-----NVTVEYRG 41 (305)
T ss_dssp HHHHHHHHHHHHHHH-----TCEEEEEE
T ss_pred HHHHHHHHHHHHHHc-----CCEEEEeC
Confidence 334455555554443 55665543
No 121
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=43.98 E-value=31 Score=24.85 Aligned_cols=63 Identities=11% Similarity=-0.035 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHH--hCCceEeeC
Q 016535 320 ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMA--AGAIPIGKH 386 (388)
Q Consensus 320 ~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma--~G~PVI~~~ 386 (388)
-..+++++.+++.+++ +.... .+..+..+.....|+++...-. .+-..=++..+ .|+||..-+
T Consensus 21 llv~km~~~a~~~gi~--v~i~a-~~~~~~~~~~~~~DvvLLgPQV-~y~~~~ik~~~~~~~ipV~vI~ 85 (108)
T 3nbm_A 21 QLANAINEGANLTEVR--VIANS-GAYGAHYDIMGVYDLIILAPQV-RSYYREMKVDAERLGIQIVATR 85 (108)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEE-EETTSCTTTGGGCSEEEECGGG-GGGHHHHHHHHTTTTCEEEECC
T ss_pred HHHHHHHHHHHHCCCc--eEEEE-cchHHHHhhccCCCEEEEChHH-HHHHHHHHHHhhhcCCcEEEeC
Confidence 3667889999999887 44422 1224455667889988875422 11222344444 378877644
No 122
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=43.73 E-value=85 Score=24.57 Aligned_cols=35 Identities=14% Similarity=-0.011 Sum_probs=22.5
Q ss_pred HHHHhCcEEEEc--CCC--CCCChHHHHHHHhCCceEee
Q 016535 351 KLLGGAVVGIHS--MID--EHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 351 ~~~~~adv~v~p--s~~--E~~~~~vlEAma~G~PVI~~ 385 (388)
+.+..||++|.- -.. +|...=+==|.+.|+||++-
T Consensus 77 ~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l 115 (167)
T 1s2d_A 77 TGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILV 115 (167)
T ss_dssp HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEE
Confidence 468899988763 122 23222234478999999987
No 123
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=43.51 E-value=28 Score=27.01 Aligned_cols=37 Identities=14% Similarity=0.031 Sum_probs=25.7
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEec
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~ 75 (388)
|+|+++ |....|..+.++..+++.|.+.| ++|.++.-
T Consensus 1 Mkv~Iv--Y~S~tGnT~~~A~~ia~~l~~~g--~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIG--YLSDYGYSDRLSQAIGRGLVKTG--VAVEMVDL 37 (161)
T ss_dssp -CEEEE--ECTTSTTHHHHHHHHHHHHHHTT--CCEEEEET
T ss_pred CEEEEE--EECCChHHHHHHHHHHHHHHhCC--CeEEEEEC
Confidence 455544 22234699999999999999999 66666543
No 124
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=43.38 E-value=1.7e+02 Score=25.62 Aligned_cols=97 Identities=5% Similarity=-0.073 Sum_probs=57.1
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHH----HHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEE----RLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~----~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
.+|+|+|.- +..+.+++.|.+.. -++..++. .+++..+. ....+.+.+++++++ |.-.....
T Consensus 5 mrIvf~Gtp------~fa~~~L~~L~~~~----~~v~~Vvt--~pd~~~gRg~~l~~~pv~~~A~~~gIp--v~~~~~~~ 70 (317)
T 3rfo_A 5 IKVVFMGTP------DFSVPVLRRLIEDG----YDVIGVVT--QPDRPVGRKKVLTPTPVKVEAEKHGIP--VLQPLRIR 70 (317)
T ss_dssp SEEEEECCS------TTHHHHHHHHHHTT----CEEEEEEC--CCCCEETTTTEECCCHHHHHHHHTTCC--EECCSCTT
T ss_pred eEEEEEeCC------HHHHHHHHHHHHCC----CcEEEEEe--CCCcccCCCcccCCCHHHHHHHHcCCC--EEccccCC
Confidence 568888874 56677777776652 24444443 22221000 012478888888887 44333443
Q ss_pred HHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 346 YRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 346 ~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
.++..+.++ ..|++|...+..-.|-.++++...|+
T Consensus 71 ~~~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~ 107 (317)
T 3rfo_A 71 EKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGC 107 (317)
T ss_dssp SHHHHHHHHHHCCSEEEESSCCSCCCHHHHHSSTTCE
T ss_pred CHHHHHHHHhcCCCEEEEcCchhhCCHHHHhhCcCCE
Confidence 344444453 47888888777777777777655554
No 125
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=43.07 E-value=59 Score=29.30 Aligned_cols=68 Identities=12% Similarity=0.076 Sum_probs=42.4
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++.+ .. .++.+++.. .|+++..+....-.-.+.+|+.+|+
T Consensus 26 ~~~~l~av~d~----~~~---~~~~~a~~~g~~----~~-----~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk 89 (387)
T 3moi_A 26 PDAQIVAACDP----NED---VRERFGKEYGIP----VF-----ATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGL 89 (387)
T ss_dssp TTEEEEEEECS----CHH---HHHHHHHHHTCC----EE-----SSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCeEEEEEEeC----CHH---HHHHHHHHcCCC----eE-----CCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCC
Confidence 67777766543 332 445566666553 11 345556665 8888877655433335679999999
Q ss_pred ceEeeC
Q 016535 381 IPIGKH 386 (388)
Q Consensus 381 PVI~~~ 386 (388)
+|++-.
T Consensus 90 ~Vl~EK 95 (387)
T 3moi_A 90 HIIVEK 95 (387)
T ss_dssp EEEECS
T ss_pred ceeeeC
Confidence 999743
No 126
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=42.97 E-value=42 Score=24.91 Aligned_cols=39 Identities=13% Similarity=-0.026 Sum_probs=26.6
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceE-EEEec
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDC-IVYTG 75 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v-~v~~~ 75 (388)
|+++++.-....+.-..+..+.++.++.+.| ++| .++-.
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g--~~v~~vff~ 40 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKG--HEIFRVFFY 40 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTT--CEEEEEEEC
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcC--CeeCEEEEe
Confidence 4666665444444456677899999999999 566 55543
No 127
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=42.62 E-value=50 Score=29.28 Aligned_cols=79 Identities=8% Similarity=-0.087 Sum_probs=50.7
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
...+.|+|-. ...=...++.++..+ .+.+.+++......+.+..+..++.+++.|. ++.+. ++
T Consensus 155 gl~va~vGD~-~~~va~Sl~~~~~~~---------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~--~v~~~-----~d 217 (335)
T 1dxh_A 155 DISYAYLGDA-RNNMGNSLLLIGAKL---------GMDVRIAAPKALWPHDEFVAQCKKFAEESGA--KLTLT-----ED 217 (335)
T ss_dssp GCEEEEESCC-SSHHHHHHHHHHHHT---------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTC--EEEEE-----SC
T ss_pred CeEEEEecCC-ccchHHHHHHHHHHc---------CCEEEEECCcccCCCHHHHHHHHHHHHHcCC--eEEEE-----eC
Confidence 3779999985 111123344444443 7899999976444444555666777777763 35544 46
Q ss_pred HHHHHHhCcEEEEcCC
Q 016535 349 LVKLLGGAVVGIHSMI 364 (388)
Q Consensus 349 l~~~~~~adv~v~ps~ 364 (388)
+.+.++.||++....|
T Consensus 218 ~~eav~~aDvvytd~w 233 (335)
T 1dxh_A 218 PKEAVKGVDFVHTDVW 233 (335)
T ss_dssp HHHHTTTCSEEEECCC
T ss_pred HHHHhCCCCEEEeCCc
Confidence 6778999998877665
No 128
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=42.59 E-value=1.4e+02 Score=24.57 Aligned_cols=64 Identities=9% Similarity=-0.040 Sum_probs=42.0
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh
Q 016535 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG 355 (388)
Q Consensus 282 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ 355 (388)
-..+...+++..+.+++ |++..+++. +........+.+++.|+++.|.+.|.=..+...+.+..
T Consensus 169 ~~~~~~~~~~~~~l~~~----~~~~ai~~~------~d~~a~g~~~al~~~g~p~di~vig~d~~~~~~~~~~~ 232 (276)
T 3ksm_A 169 DDRGAARSEMLRLLKET----PTIDGLFTP------NESTTIGALVAIRQSGMSKQFGFIGFDQTEELEAAMYA 232 (276)
T ss_dssp SSHHHHHHHHHHHHHHC----SCCCEEECC------SHHHHHHHHHHHHHTTCTTSSEEEEESCCHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHhC----CCceEEEEC------CchhhhHHHHHHHHcCCCCCeEEEEeCCCHHHHHHHHc
Confidence 34566777788887775 677777776 33333345566777888888999887544444445554
No 129
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=42.17 E-value=7.9 Score=20.49 Aligned_cols=32 Identities=28% Similarity=0.535 Sum_probs=22.0
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 016535 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g 342 (388)
+++-+.+|+ ..+.+.++++.+++..+. |.|.|
T Consensus 4 qvrtiwvgg-----tpeelkklkeeakkanir--vtfwg 35 (36)
T 2ki0_A 4 QVRTIWVGG-----TPEELKKLKEEAKKANIR--VTFWG 35 (36)
T ss_dssp SCCCCCBCC-----CHHHHHHHHHHHHHHCCC--CCBCC
T ss_pred eeEEEEecC-----CHHHHHHHHHHHHhccEE--EEeec
Confidence 556667776 556677888888887654 66655
No 130
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=41.80 E-value=20 Score=33.69 Aligned_cols=38 Identities=11% Similarity=0.094 Sum_probs=28.7
Q ss_pred cceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+++|+++.... .|--.-+.+|++.|.++| |+|+++++.
T Consensus 8 ~~~vl~~p~p~---~GHi~P~l~La~~L~~rG--~~VT~v~t~ 45 (482)
T 2pq6_A 8 KPHVVMIPYPV---QGHINPLFKLAKLLHLRG--FHITFVNTE 45 (482)
T ss_dssp CCEEEEECCSS---HHHHHHHHHHHHHHHHTT--CEEEEEEEH
T ss_pred CCEEEEecCcc---chhHHHHHHHHHHHHhCC--CeEEEEeCC
Confidence 46777774222 266677789999999999 899998875
No 131
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=41.57 E-value=80 Score=30.15 Aligned_cols=26 Identities=12% Similarity=0.224 Sum_probs=21.5
Q ss_pred ChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 49 GGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 49 G~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
|..++-..+++.|.+.| ++++++..+
T Consensus 134 G~g~~g~~la~~L~~~~--~~vvvid~~ 159 (565)
T 4gx0_A 134 GIDPITRTLIRKLESRN--HLFVVVTDN 159 (565)
T ss_dssp SCCHHHHHHHHHTTTTT--CCEEEEESC
T ss_pred CCChHHHHHHHHHHHCC--CCEEEEECC
Confidence 55678889999999999 778887765
No 132
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=41.04 E-value=70 Score=27.62 Aligned_cols=67 Identities=6% Similarity=-0.136 Sum_probs=42.8
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCce
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP 382 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PV 382 (388)
++++++-+-+. +.+ ..++.+++++.+. + +++.+++...|+++..+....-.-.+.+|+.+|++|
T Consensus 30 ~~~~l~av~d~----~~~---~~~~~a~~~~~~~------~---~~~~~ll~~~D~V~i~tp~~~h~~~~~~al~~gk~v 93 (308)
T 3uuw_A 30 ERFEFVGAFTP----NKV---KREKICSDYRIMP------F---DSIESLAKKCDCIFLHSSTETHYEIIKILLNLGVHV 93 (308)
T ss_dssp SSSEEEEEECS----CHH---HHHHHHHHHTCCB------C---SCHHHHHTTCSEEEECCCGGGHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEECC----CHH---HHHHHHHHcCCCC------c---CCHHHHHhcCCEEEEeCCcHhHHHHHHHHHHCCCcE
Confidence 67888755543 332 4566666766541 2 334445559998887765544344567899999999
Q ss_pred Eee
Q 016535 383 IGK 385 (388)
Q Consensus 383 I~~ 385 (388)
++-
T Consensus 94 l~E 96 (308)
T 3uuw_A 94 YVD 96 (308)
T ss_dssp EEC
T ss_pred EEc
Confidence 974
No 133
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=41.01 E-value=1.9e+02 Score=25.67 Aligned_cols=98 Identities=12% Similarity=0.007 Sum_probs=51.6
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEE
Q 016535 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361 (388)
Q Consensus 282 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ 361 (388)
++...+++.+....+.. ..-+++++-...........+.+.+.+++.+.+-.+.-....+.+++.+.+..+|.+++
T Consensus 233 ~~~~~~l~~~~~~~~~~----~~~~i~i~y~S~~GnT~~lA~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii~ 308 (398)
T 1ycg_A 233 KDPGRIIEAYARWAEGQ----GKAKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLSVSDRNDVIKEILDARAVLV 308 (398)
T ss_dssp SCHHHHHHHHHHHHHTC----CCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGSCHHHHHHHHHHCSEEEE
T ss_pred CCHHHHHHHHHHHhccC----CcCeEEEEEECCccHHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHCCEEEE
Confidence 35677777776665542 12344444333222233444555555555454322333444455677777889997665
Q ss_pred --cCCCCCCChHHHHHHH-------hCCceE
Q 016535 362 --SMIDEHFGISVVEYMA-------AGAIPI 383 (388)
Q Consensus 362 --ps~~E~~~~~vlEAma-------~G~PVI 383 (388)
|.+..+.+-.+-+.+. .|+++.
T Consensus 309 g~p~y~~~~~~~~~~~l~~l~~~~~~~k~~~ 339 (398)
T 1ycg_A 309 GSPTINNDILPVVSPLLDDLVGLRPKNKVGL 339 (398)
T ss_dssp ECCCBTTBCCGGGHHHHHHHHHHCCSSCEEE
T ss_pred ECCccCccchHHHHHHHHHHhccccCCCEEE
Confidence 4466666655444332 466654
No 134
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=40.93 E-value=23 Score=21.89 Aligned_cols=20 Identities=25% Similarity=0.745 Sum_probs=8.7
Q ss_pred CchhHHHHHHHHHHHHHHHH
Q 016535 3 PYGILIWAVITAVLASILIL 22 (388)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~ 22 (388)
|.++-+|-+++++++.+++|
T Consensus 4 ~~~vp~WiIi~svl~GLLLL 23 (54)
T 2l8s_A 4 PGRVPLWVILLSAFAGLLLL 23 (54)
T ss_dssp CCCCCTHHHHHHHHHHHHHH
T ss_pred CccCchHHHHHHHHHHHHHH
Confidence 33344444444444444443
No 135
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=40.22 E-value=36 Score=29.94 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=41.7
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCCc
Q 016535 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAI 381 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~P 381 (388)
+++++-+.+. +.+ ..++.+++++.+ ++ ..++.+++. ..|+++.++....-.-.+.+|+.+|++
T Consensus 28 ~~~l~av~d~----~~~---~a~~~a~~~~~~-~~-------~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~Gkh 92 (334)
T 3ohs_X 28 EHQVVAVAAR----DLS---RAKEFAQKHDIP-KA-------YGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKA 92 (334)
T ss_dssp TEEEEEEECS----SHH---HHHHHHHHHTCS-CE-------ESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCE
T ss_pred CeEEEEEEcC----CHH---HHHHHHHHcCCC-cc-------cCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCE
Confidence 3566655542 322 556667777764 22 145566676 588877766443323346789999999
Q ss_pred eEeeC
Q 016535 382 PIGKH 386 (388)
Q Consensus 382 VI~~~ 386 (388)
|++-.
T Consensus 93 Vl~EK 97 (334)
T 3ohs_X 93 VLCEK 97 (334)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99743
No 136
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=39.88 E-value=1.7e+02 Score=25.16 Aligned_cols=99 Identities=8% Similarity=0.024 Sum_probs=58.9
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC--C--------cc-HHHHHHHHHHHHhcCCCCcEEEccCCCHHHHH
Q 016535 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN--K--------SD-EERLQSLKDKSIELKVDGNVEFYKNLLYRDLV 350 (388)
Q Consensus 282 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~--~--------~~-~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~ 350 (388)
.+.+.+++.++++++.... -.+..++-+.... + .. .+-++.+++..++.|++- +....+.+++.
T Consensus 28 e~~~~~~e~A~~lk~~~~~--~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~Glp~---~tev~d~~~v~ 102 (288)
T 3tml_A 28 ESEQMTIDTAGRLKEICEK--LNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLGLPV---LTDVHSIDEIE 102 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHH--HTCCEEEECBC--------------CHHHHHHHHHHHHHHHCCCE---EEECCSGGGHH
T ss_pred CCHHHHHHHHHHHHHHHHH--cCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeE---EEEeCCHHHHH
Confidence 4567777877777654111 1244444332110 0 01 355677889999999872 23333344555
Q ss_pred HHHHhCcEEEEcCC-CCCCChHHHHHHHhCCceEeeC
Q 016535 351 KLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 351 ~~~~~adv~v~ps~-~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+-.-+|++-.+|. ..++++ +-|+-..|+||+-++
T Consensus 103 ~l~~~vd~lkIgA~~~~n~~L-Lr~~a~~gkPVilK~ 138 (288)
T 3tml_A 103 QVASVVDVLQTPAFLCRQTDF-IHACARSGKPVNIKK 138 (288)
T ss_dssp HHHHHCSEEEECGGGTTCHHH-HHHHHTSSSCEEEEC
T ss_pred HHHHhCCEEEECcccccCHHH-HHHHHccCCcEEEeC
Confidence 44455999988984 355554 556778899999875
No 137
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=39.57 E-value=1.5e+02 Score=25.91 Aligned_cols=34 Identities=9% Similarity=0.078 Sum_probs=21.6
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
++|||+|+ |...+.....++|.+.| +++..+.+.
T Consensus 2 ~~mrIvf~--------Gt~~fa~~~L~~L~~~~--~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFA--------GTPDFAARHLDALLSSG--HNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEE--------ECSHHHHHHHHHHHHTT--CEEEEEECC
T ss_pred CCCEEEEE--------ecCHHHHHHHHHHHHCC--CcEEEEEeC
Confidence 46999998 33344555667777778 666644443
No 138
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=39.53 E-value=1.6e+02 Score=25.75 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=23.2
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
++|||+|+ |...+.....++|.+.| ++|..+.+.
T Consensus 6 ~~mrivf~--------Gt~~fa~~~L~~L~~~~--~~v~~Vvt~ 39 (318)
T 3q0i_A 6 QSLRIVFA--------GTPDFAARHLAALLSSE--HEIIAVYTQ 39 (318)
T ss_dssp -CCEEEEE--------CCSHHHHHHHHHHHTSS--SEEEEEECC
T ss_pred cCCEEEEE--------ecCHHHHHHHHHHHHCC--CcEEEEEcC
Confidence 47899998 45556666778888888 666654443
No 139
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=39.50 E-value=1.1e+02 Score=26.84 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=22.5
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
++|||+|+ |...+.....++|.+.| |+|..+.+.
T Consensus 1 ~~mrivf~--------Gtp~fa~~~L~~L~~~~--~~v~~Vvt~ 34 (314)
T 3tqq_A 1 MSLKIVFA--------GTPQFAVPTLRALIDSS--HRVLAVYTQ 34 (314)
T ss_dssp CCCEEEEE--------ECSGGGHHHHHHHHHSS--SEEEEEECC
T ss_pred CCcEEEEE--------CCCHHHHHHHHHHHHCC--CeEEEEEeC
Confidence 46899988 34444556678888888 666555443
No 140
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=39.28 E-value=1.8e+02 Score=24.83 Aligned_cols=103 Identities=13% Similarity=-0.030 Sum_probs=62.7
Q ss_pred EEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCC--------ccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 273 ISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK--------SDEERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 273 l~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~--------~~~~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
+.++-....-+.+.+++.+..+++.. ..++-.+...++ ...+..+.+++.+++.|++--.+...
T Consensus 40 ~vIAgpc~~~~~e~a~~~a~~~k~~g------a~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te~~d-- 111 (276)
T 1vs1_A 40 AVIAGPCSVESWEQVREAALAVKEAG------AHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEVLD-- 111 (276)
T ss_dssp EEEEECSBCCCHHHHHHHHHHHHHHT------CSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEECCC--
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHhC------CCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEecCC--
Confidence 33444456678888888888887763 223333321111 12567788999999999983333333
Q ss_pred CHHHHHHHHHhCcEEEEcCC-CCCCChHHHH-HHHhCCceEeeC
Q 016535 345 LYRDLVKLLGGAVVGIHSMI-DEHFGISVVE-YMAAGAIPIGKH 386 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~-~E~~~~~vlE-Ama~G~PVI~~~ 386 (388)
.+.+..+-.-+|++=.+|. .+. ..+++ +...|+||+-++
T Consensus 112 -~~~~~~l~~~vd~~kIgs~~~~n--~~ll~~~a~~~kPV~lk~ 152 (276)
T 1vs1_A 112 -PRHVETVSRYADMLQIGARNMQN--FPLLREVGRSGKPVLLKR 152 (276)
T ss_dssp -GGGHHHHHHHCSEEEECGGGTTC--HHHHHHHHHHTCCEEEEC
T ss_pred -HHHHHHHHHhCCeEEECcccccC--HHHHHHHHccCCeEEEcC
Confidence 3444444344898888874 344 34444 445899999875
No 141
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=39.02 E-value=40 Score=30.20 Aligned_cols=83 Identities=16% Similarity=0.129 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh--CcEEEEcCC
Q 016535 287 QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG--AVVGIHSMI 364 (388)
Q Consensus 287 ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~--adv~v~ps~ 364 (388)
-++++..+..-... ..+.+++-+.+. +. +..++.+++++.+ ++ + .++.+++.. .|+++.++.
T Consensus 21 h~~~~~~~~~~~~~-~~~~~l~av~d~----~~---~~a~~~a~~~g~~-~~--~-----~d~~~ll~~~~iDaV~I~tP 84 (390)
T 4h3v_A 21 HSQAWRSAPRFFDL-PLHPDLNVLCGR----DA---EAVRAAAGKLGWS-TT--E-----TDWRTLLERDDVQLVDVCTP 84 (390)
T ss_dssp HHHHHHHHHHHSCC-SSEEEEEEEECS----SH---HHHHHHHHHHTCS-EE--E-----SCHHHHTTCTTCSEEEECSC
T ss_pred HHHHHHhCcccccc-ccCceEEEEEcC----CH---HHHHHHHHHcCCC-cc--c-----CCHHHHhcCCCCCEEEEeCC
Confidence 34555555332100 113456655543 32 2567777888765 22 1 345556654 677777665
Q ss_pred CCCCChHHHHHHHhCCceEee
Q 016535 365 DEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 365 ~E~~~~~vlEAma~G~PVI~~ 385 (388)
...=.-.+++|+.+|++|++-
T Consensus 85 ~~~H~~~~~~al~aGkhVl~E 105 (390)
T 4h3v_A 85 GDSHAEIAIAALEAGKHVLCE 105 (390)
T ss_dssp GGGHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHHHHcCCCceee
Confidence 443334578999999999874
No 142
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=38.78 E-value=1.2e+02 Score=26.35 Aligned_cols=77 Identities=9% Similarity=-0.032 Sum_probs=50.2
Q ss_pred CcEEEEEcccCCCCC-hHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 269 YPAIISVAQFRPEKA-HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg-~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
...+.|+|-. .+ ...++.++..+ .+.+.+++......+.+..+..++.+++.|. .+... +
T Consensus 146 gl~va~vGD~---~~va~Sl~~~~~~~---------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~--~~~~~-----~ 206 (307)
T 3tpf_A 146 IAKVAFIGDS---NNMCNSWLITAAIL---------GFEISIAMPKNYKISPEIWEFAMKQALISGA--KISLG-----Y 206 (307)
T ss_dssp CCEEEEESCS---SHHHHHHHHHHHHH---------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTC--EEEEE-----S
T ss_pred CCEEEEEcCC---CccHHHHHHHHHHc---------CCEEEEECCCccCCCHHHHHHHHHHHHHcCC--eEEEE-----c
Confidence 4779999972 33 23455555555 7899999976544455555566666667663 35443 3
Q ss_pred HHHHHHHhCcEEEEcCC
Q 016535 348 DLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~ 364 (388)
++.+.++.||++....|
T Consensus 207 d~~eav~~aDvvyt~~w 223 (307)
T 3tpf_A 207 DKFEALKDKDVVITDTW 223 (307)
T ss_dssp CHHHHHTTCSEEEECCS
T ss_pred CHHHHhcCCCEEEecCc
Confidence 56678999998777665
No 143
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=38.25 E-value=65 Score=27.38 Aligned_cols=22 Identities=9% Similarity=-0.071 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeC
Q 016535 286 LQLEAFSVALRKLDADLPRPRLQFVGS 312 (388)
Q Consensus 286 ~ll~a~~~l~~~~~~~~~~~~l~ivG~ 312 (388)
.+++.+....++. ++.+.+...
T Consensus 19 ~~~~gi~~~a~~~-----g~~~~~~~~ 40 (306)
T 8abp_A 19 TEWKFADKAGKDL-----GFEVIKIAV 40 (306)
T ss_dssp HHHHHHHHHHHHH-----TEEEEEEEC
T ss_pred HHHHHHHHHHHHc-----CCEEEEeCC
Confidence 3444454444443 566666554
No 144
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=38.24 E-value=1.9e+02 Score=25.76 Aligned_cols=84 Identities=14% Similarity=0.005 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcE-EEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEc
Q 016535 284 HPLQLEAFSVALRKLDADLPRPR-LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHS 362 (388)
Q Consensus 284 ~~~ll~a~~~l~~~~~~~~~~~~-l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~p 362 (388)
...+++.+.+..... +.-+ +++.++. ........+.+.+.+++.+.+-.+.-+...+.+++.+-+..+|.+++.
T Consensus 240 ~~~~~~~~~~~~~~~----~~~k~~i~~~S~-~gnT~~la~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~d~iiig 314 (404)
T 2ohh_A 240 PMKIIEAYTGWATGM----VDERVTVIYDTM-HGSTRKMAHAIAEGAMSEGVDVRVYCLHEDDRSEIVKDILESGAIALG 314 (404)
T ss_dssp HHHHHHHHHHHHTTC----CCSEEEEEECCS-SSHHHHHHHHHHHHHHTTTCEEEEEETTTSCHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHhccC----CCCcEEEEEECC-ChHHHHHHHHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHHCCEEEEE
Confidence 455555555444311 2333 3444442 222334555555555554443223334555566777788899976654
Q ss_pred C--CCCCCChHH
Q 016535 363 M--IDEHFGISV 372 (388)
Q Consensus 363 s--~~E~~~~~v 372 (388)
+ +..+.+-.+
T Consensus 315 sP~y~~~~~~~~ 326 (404)
T 2ohh_A 315 APTIYDEPYPSV 326 (404)
T ss_dssp CCEETTEECTHH
T ss_pred CccccccchHHH
Confidence 3 444555444
No 145
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=38.18 E-value=1.8e+02 Score=24.55 Aligned_cols=100 Identities=7% Similarity=-0.014 Sum_probs=61.8
Q ss_pred ccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCc--------cHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 277 QFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS--------DEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 277 rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~--------~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
........+.+++.+..+++. ....+-.+...++. ..+..+.+++..++.|++--.+++. ...
T Consensus 29 gpc~~~~~e~a~~~a~~l~~~------Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d---~~~ 99 (262)
T 1zco_A 29 GPCSIESREQIMKVAEFLAEV------GIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMD---TRH 99 (262)
T ss_dssp ECSBCCCHHHHHHHHHHHHHT------TCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCC---GGG
T ss_pred eCCCCCCHHHHHHHHHHHHHc------CCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCC---HHh
Confidence 346667789999988888776 34444444321111 1566788899999999873223333 344
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHH-HhCCceEeeC
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYM-AAGAIPIGKH 386 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAm-a~G~PVI~~~ 386 (388)
+..+-..+|++=.+|.. .....+++++ ..|+||+-++
T Consensus 100 ~~~l~~~vd~~kIga~~-~~n~~ll~~~a~~~kPV~lk~ 137 (262)
T 1zco_A 100 VELVAKYSDILQIGARN-SQNFELLKEVGKVENPVLLKR 137 (262)
T ss_dssp HHHHHHHCSEEEECGGG-TTCHHHHHHHTTSSSCEEEEC
T ss_pred HHHHHhhCCEEEECccc-ccCHHHHHHHHhcCCcEEEec
Confidence 44443448988888753 2234445544 4799999875
No 146
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=38.04 E-value=55 Score=27.54 Aligned_cols=9 Identities=11% Similarity=0.209 Sum_probs=3.8
Q ss_pred HHhCCceEe
Q 016535 376 MAAGAIPIG 384 (388)
Q Consensus 376 ma~G~PVI~ 384 (388)
...|+|+|.
T Consensus 66 ~~~g~~~Vi 74 (245)
T 1p9l_A 66 IDNGIHAVV 74 (245)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCCEEE
Confidence 444444443
No 147
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=37.61 E-value=65 Score=28.91 Aligned_cols=54 Identities=9% Similarity=0.024 Sum_probs=35.5
Q ss_pred HHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 324 SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 324 ~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
..++.+++++.+ .+ + .++.+++.. .|+++.++....-.-.+.+|+.+|++|++-
T Consensus 58 ~a~~~a~~~~~~-~~--~-----~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~E 113 (383)
T 3oqb_A 58 KVEALAKRFNIA-RW--T-----TDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCE 113 (383)
T ss_dssp HHHHHHHHTTCC-CE--E-----SCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHhCCC-cc--c-----CCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEc
Confidence 556777777764 11 1 345566665 787777665543344568999999999973
No 148
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=37.42 E-value=1.5e+02 Score=26.24 Aligned_cols=92 Identities=10% Similarity=-0.029 Sum_probs=53.3
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
+..+..+|-- .-+....+.++. . ++++++-+-+. +.+ ..++.+++++.. ..+ .+
T Consensus 26 ~irvgiiG~G--~~~~~~~~~~~~----~-----~~~~lvav~d~----~~~---~a~~~a~~~~~~---~~~-----~~ 79 (361)
T 3u3x_A 26 ELRFAAVGLN--HNHIYGQVNCLL----R-----AGARLAGFHEK----DDA---LAAEFSAVYADA---RRI-----AT 79 (361)
T ss_dssp CCEEEEECCC--STTHHHHHHHHH----H-----TTCEEEEEECS----CHH---HHHHHHHHSSSC---CEE-----SC
T ss_pred CcEEEEECcC--HHHHHHHHHHhh----c-----CCcEEEEEEcC----CHH---HHHHHHHHcCCC---ccc-----CC
Confidence 3677777742 123333444432 2 57888776653 332 456666676532 111 45
Q ss_pred HHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 349 LVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 349 l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+.+++.. .|+++..+....-.-.+.+|+.+|++|++-.
T Consensus 80 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EK 119 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDK 119 (361)
T ss_dssp HHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeC
Confidence 5566665 7877776544322334679999999999843
No 149
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=37.37 E-value=1.7e+02 Score=23.84 Aligned_cols=22 Identities=5% Similarity=-0.197 Sum_probs=9.8
Q ss_pred CcEEEEcCCCCCCChHHHHHHH
Q 016535 356 AVVGIHSMIDEHFGISVVEYMA 377 (388)
Q Consensus 356 adv~v~ps~~E~~~~~vlEAma 377 (388)
.|++|+..+..-.|-.++++..
T Consensus 83 ~Dliv~a~y~~il~~~~l~~~~ 104 (212)
T 3av3_A 83 IDWIALAGYMRLIGPTLLSAYE 104 (212)
T ss_dssp CCEEEESSCCSCCCHHHHHHTT
T ss_pred CCEEEEchhhhhCCHHHHhhhc
Confidence 3455444444444444444433
No 150
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=37.25 E-value=2.2e+02 Score=25.81 Aligned_cols=52 Identities=8% Similarity=0.029 Sum_probs=38.0
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHH
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLA 86 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~ 86 (388)
+.++|+|+..+.+..|-+.+++..++.++.+.| .+|++.++....+.+.+.+
T Consensus 190 ~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG--~~v~~~~P~~~~~~~~~~~ 241 (399)
T 3q98_A 190 KGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFG--MDVTLAHPEGYDLIPDVVE 241 (399)
T ss_dssp TTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGT--CEEEEECCTTCCCCHHHHH
T ss_pred CCCEEEEEEecccccCcchHHHHHHHHHHHHcC--CEEEEECCcccCCCHHHHH
Confidence 577899987666554455788899999999999 8998888765323344443
No 151
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=37.07 E-value=80 Score=28.27 Aligned_cols=79 Identities=9% Similarity=0.035 Sum_probs=52.3
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
...+.++|-+. ..=...++.++..+ .+.+.+++......+.+..+..++.+++.|. ++.+. ++
T Consensus 181 gl~ia~vGD~~-~~va~S~~~~~~~~---------g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~--~v~~~-----~d 243 (358)
T 4h31_A 181 DIQFAYLGDAR-NNVGNSLMVGAAKM---------GMDIRLVGPQAYWPDEELVAACQAIAKQTGG--KITLT-----EN 243 (358)
T ss_dssp GCEEEEESCTT-SHHHHHHHHHHHHH---------TCEEEEESCGGGSCCHHHHHHHHHHHHHHTC--EEEEE-----SC
T ss_pred ceEEEecCCCC-cccchHHHHHHHhc---------CceEEEeCCcccCCCHHHHHHHHHHHHHcCC--cceec-----cC
Confidence 47899999752 11134455666555 7899999975444466677777777777764 35544 45
Q ss_pred HHHHHHhCcEEEEcCC
Q 016535 349 LVKLLGGAVVGIHSMI 364 (388)
Q Consensus 349 l~~~~~~adv~v~ps~ 364 (388)
+.+.++.||++..-.|
T Consensus 244 ~~eav~~aDvvyt~~w 259 (358)
T 4h31_A 244 VAEGVQGCDFLYTDVW 259 (358)
T ss_dssp HHHHHTTCSEEEECCS
T ss_pred HHHHhccCcEEEEEEE
Confidence 6778999997765444
No 152
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=36.57 E-value=84 Score=27.92 Aligned_cols=69 Identities=13% Similarity=0.070 Sum_probs=42.8
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+.+ .+ ..++.++++++. +... +++.+++. ..|+++..+....-.-.+.+|+.+|+
T Consensus 47 ~~~~lvav~d~~-~~------~~~~~a~~~g~~--~~~~-----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk 112 (357)
T 3ec7_A 47 SGVEVVAVCDIV-AG------RAQAALDKYAIE--AKDY-----NDYHDLINDKDVEVVIITASNEAHADVAVAALNANK 112 (357)
T ss_dssp TTEEEEEEECSS-TT------HHHHHHHHHTCC--CEEE-----SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEEeCC-HH------HHHHHHHHhCCC--Ceee-----CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCC
Confidence 678877555432 22 456667776642 2222 34555666 48888877655443445678999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 113 ~Vl~E 117 (357)
T 3ec7_A 113 YVFCE 117 (357)
T ss_dssp EEEEE
T ss_pred CEEee
Confidence 99974
No 153
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=36.49 E-value=86 Score=27.30 Aligned_cols=69 Identities=10% Similarity=-0.034 Sum_probs=41.9
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHH-HhCcEEEEcCCCCCCChHHHHHHHhCCc
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLL-GGAVVGIHSMIDEHFGISVVEYMAAGAI 381 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~-~~adv~v~ps~~E~~~~~vlEAma~G~P 381 (388)
++++++.+-+. +.+ ..++.+++++.. ... .++.+++ ..+|+++..+....-.-.+.+|+.+|++
T Consensus 24 ~~~~~~~v~d~----~~~---~~~~~~~~~~~~---~~~-----~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~gk~ 88 (325)
T 2ho3_A 24 GEYQLVAIYSR----KLE---TAATFASRYQNI---QLF-----DQLEVFFKSSFDLVYIASPNSLHFAQAKAALSAGKH 88 (325)
T ss_dssp TSEEEEEEECS----SHH---HHHHHGGGSSSC---EEE-----SCHHHHHTSSCSEEEECSCGGGHHHHHHHHHHTTCE
T ss_pred CCeEEEEEEeC----CHH---HHHHHHHHcCCC---eEe-----CCHHHHhCCCCCEEEEeCChHHHHHHHHHHHHcCCc
Confidence 57777655432 322 455666666532 222 2344455 5789888776654444456789999999
Q ss_pred eEeeC
Q 016535 382 PIGKH 386 (388)
Q Consensus 382 VI~~~ 386 (388)
|++-.
T Consensus 89 V~~EK 93 (325)
T 2ho3_A 89 VILEK 93 (325)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 98753
No 154
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=36.26 E-value=52 Score=28.04 Aligned_cols=47 Identities=4% Similarity=0.015 Sum_probs=32.5
Q ss_pred hhcccCccceEEEeccccCCCCChh-hHHHHHHHHHhhcCCCceEEEEecC
Q 016535 27 HNARRNRTTSVAFFHPNTNDGGGGE-RVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 27 ~~~~~~~~~~I~~~~p~~~~gGG~~-~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+..++++..+|+++.|..... --. .++..+.+++.+.| +++.+....
T Consensus 6 r~L~~~~s~~Igvi~~~~~~~-~~~~~~~~gi~~~a~~~g--~~~~~~~~~ 53 (301)
T 3miz_A 6 RLIRSSRSNTFGIITDYVSTT-PYSVDIVRGIQDWANANG--KTILIANTG 53 (301)
T ss_dssp ------CCCEEEEEESSTTTC-CSCHHHHHHHHHHHHHTT--CEEEEEECT
T ss_pred HHHhhCCCCEEEEEeCCCcCc-ccHHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 445667778999999988654 455 77888889999999 787777654
No 155
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=36.12 E-value=1.2e+02 Score=24.62 Aligned_cols=68 Identities=7% Similarity=0.018 Sum_probs=43.5
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCC---CCChHHHHHHHhC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE---HFGISVVEYMAAG 379 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E---~~~~~vlEAma~G 379 (388)
.++.+++-|- +.+..+.+.++++++|. .+...++ ..+.-+|..+..+ .-....+.|++.|
T Consensus 6 ~~~~i~~sg~-----~~~~~~~l~~~~~~~G~----~~~~~~~--------~~~THlI~~~~~~~~~~rt~K~~~a~~~g 68 (229)
T 1l0b_A 6 RDISMVVSGL-----TPKEVMIVQKFAEKYRL----ALTDVIT--------EETTHVIIKTDAEFVCERTLKYFLGIAGG 68 (229)
T ss_dssp CCCEEEEESC-----CHHHHHHHHHHHHHTTC----EECSSCC--------SSCCEEEECBCTTSEECCCHHHHHHHHTT
T ss_pred CCeEEEEcCC-----CHHHHHHHHHHHHHcCC----EEeCCcC--------CCCCEEEEcCCccccccccHHHHHHHHCC
Confidence 4677777664 33446678888888864 2333332 3455555554322 3456789999999
Q ss_pred CceEeeCC
Q 016535 380 AIPIGKHF 387 (388)
Q Consensus 380 ~PVI~~~~ 387 (388)
+|||.++|
T Consensus 69 ~~IV~~~W 76 (229)
T 1l0b_A 69 KWIVSYSW 76 (229)
T ss_dssp CEEEETHH
T ss_pred CcEecHHH
Confidence 99998653
No 156
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=36.11 E-value=65 Score=28.19 Aligned_cols=67 Identities=10% Similarity=0.026 Sum_probs=42.1
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++. . + +++.+++. .+|+++..+....-.-.+.+|+.+|+
T Consensus 26 ~~~~l~av~d~----~~~---~~~~~~~~~~~----~---~---~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk 88 (331)
T 4hkt_A 26 ADARLVAVADA----FPA---AAEAIAGAYGC----E---V---RTIDAIEAAADIDAVVICTPTDTHADLIERFARAGK 88 (331)
T ss_dssp TTEEEEEEECS----SHH---HHHHHHHHTTC----E---E---CCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEECC----CHH---HHHHHHHHhCC----C---c---CCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCC
Confidence 67777755432 332 45566666543 2 1 34556666 78988877654443445678999999
Q ss_pred ceEeeC
Q 016535 381 IPIGKH 386 (388)
Q Consensus 381 PVI~~~ 386 (388)
+|++-.
T Consensus 89 ~v~~EK 94 (331)
T 4hkt_A 89 AIFCEK 94 (331)
T ss_dssp EEEECS
T ss_pred cEEEec
Confidence 999743
No 157
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=36.02 E-value=41 Score=28.41 Aligned_cols=47 Identities=13% Similarity=0.206 Sum_probs=31.6
Q ss_pred hhcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCce-EEEEecC
Q 016535 27 HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLD-CIVYTGD 76 (388)
Q Consensus 27 ~~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~-v~v~~~~ 76 (388)
|..++++..+|+++.|..... -...++..+.+++.+.| ++ +.+....
T Consensus 3 r~L~~~~~~~Igvi~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~~ 50 (277)
T 3hs3_A 3 LTLYQKKSKMIGIIIPDLNNR-FYAQIIDGIQEVIQKEG--YTALISFSTN 50 (277)
T ss_dssp -----CCCCEEEEEESCTTSH-HHHHHHHHHHHHHHHTT--CEEEEEECSS
T ss_pred hhhhcCCCCEEEEEeCCCCCh-hHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 445677788999999987544 45666777888888999 88 6665544
No 158
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=35.90 E-value=40 Score=29.33 Aligned_cols=44 Identities=18% Similarity=0.038 Sum_probs=26.1
Q ss_pred HHHhhcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 24 SHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 24 ~~~~~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+|=+.++.+..|+|++. ||.+-+=..+++.|.++| ++|+++...
T Consensus 4 ~~~~~~~~~~~~~vlVT-------GatG~iG~~l~~~L~~~g--~~V~~~~r~ 47 (335)
T 1rpn_A 4 SHHHHHHGSMTRSALVT-------GITGQDGAYLAKLLLEKG--YRVHGLVAR 47 (335)
T ss_dssp -----------CEEEEE-------TTTSHHHHHHHHHHHHTT--CEEEEEECC
T ss_pred ccccccccccCCeEEEE-------CCCChHHHHHHHHHHHCC--CeEEEEeCC
Confidence 45566777788888877 677777778889999999 788877654
No 159
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=35.77 E-value=33 Score=28.82 Aligned_cols=92 Identities=11% Similarity=-0.137 Sum_probs=54.2
Q ss_pred CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcE---EEc-cCCCHHHHHHHHHhC
Q 016535 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV---EFY-KNLLYRDLVKLLGGA 356 (388)
Q Consensus 281 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V---~~~-g~v~~~~l~~~~~~a 356 (388)
.|=...+.+|+..+.. .. ..-.+.++|. ..+..+.+.+.++..|.. .| +|+ |..++... ..+..=
T Consensus 47 ~kT~~~L~~A~~~i~~-i~---~~~~iLfVgt-----k~~~~~~V~~~A~~~g~~-yv~~~RWlgG~LTN~~t-~~~~~P 115 (241)
T 2xzm_B 47 EETWQKIKLAARVIAA-VQ---HPEDVMVVCS-----RIYGQRAAIKFAGYTHCK-STSSSRWTPGTLTNYQT-LKYEEP 115 (241)
T ss_dssp HHHHHHHHHHHHHHHH-CS---SGGGEEEECC-----SHHHHHHHHHHHHHHTCB-CCCCSSCCTTTTTCTTC-TTCCCC
T ss_pred HHHHHHHHHHHHHHHH-Hh---CCCeEEEEEC-----CHHHHHHHHHHHHHhCCE-EeccccccCCcccCccc-cccCCC
Confidence 3444556666666654 21 2356678886 444455667777766653 23 455 43332211 234456
Q ss_pred cEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 357 VVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 357 dv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
|+++..... .=..++.||...|.|||+
T Consensus 116 dlliV~Dp~-~e~~ai~EA~~l~IPvIa 142 (241)
T 2xzm_B 116 RVLIVTDPR-SDFQAIKEASYVNIPVIA 142 (241)
T ss_dssp SEEEESCTT-TTHHHHHHHTTTTCCEEE
T ss_pred CEEEEECCC-cchHHHHHHHHhCCCEEE
Confidence 666665433 224689999999999997
No 160
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=35.73 E-value=33 Score=31.12 Aligned_cols=36 Identities=22% Similarity=0.069 Sum_probs=24.3
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceE
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI 383 (388)
.++.+.+..+|+++-.|..--+.--+++.|+ ..|||
T Consensus 255 ~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma-~~pII 290 (388)
T 1vl6_A 255 GDLETALEGADFFIGVSRGNILKPEWIKKMS-RKPVI 290 (388)
T ss_dssp SCHHHHHTTCSEEEECSCSSCSCHHHHTTSC-SSCEE
T ss_pred hhHHHHHccCCEEEEeCCCCccCHHHHHhcC-CCCEE
Confidence 4589999999999988763334444666665 24444
No 161
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=35.62 E-value=40 Score=28.60 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=29.7
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
..++++..+|+++.|..... -...++..+-+++.+.| +++.++....
T Consensus 2 ~L~~~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~~ 48 (293)
T 3l6u_A 2 SLTSPKRNIVGFTIVNDKHE-FAQRLINAFKAEAKANK--YEALVATSQN 48 (293)
T ss_dssp -------CEEEEEESCSCSH-HHHHHHHHHHHHHHHTT--CEEEEEECSS
T ss_pred CCCCCCCcEEEEEEecCCcH-HHHHHHHHHHHHHHHcC--CEEEEECCCC
Confidence 34677788999999987443 44556667778888899 7877776553
No 162
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=35.59 E-value=60 Score=28.63 Aligned_cols=69 Identities=14% Similarity=0.157 Sum_probs=43.0
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++.+ ++ .+++.+++. .+|+++..+....-.-.+.+|+.+|+
T Consensus 25 ~~~~l~av~d~----~~~---~~~~~~~~~~~~-~~-------~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk 89 (344)
T 3ezy_A 25 DDAILYAISDV----RED---RLREMKEKLGVE-KA-------YKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKK 89 (344)
T ss_dssp TTEEEEEEECS----CHH---HHHHHHHHHTCS-EE-------ESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEECC----CHH---HHHHHHHHhCCC-ce-------eCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCC
Confidence 67777755432 332 455566666543 11 145566677 78988877655443344678999999
Q ss_pred ceEeeC
Q 016535 381 IPIGKH 386 (388)
Q Consensus 381 PVI~~~ 386 (388)
+|++-.
T Consensus 90 ~v~~EK 95 (344)
T 3ezy_A 90 HVFCEK 95 (344)
T ss_dssp EEEEES
T ss_pred eEEEEC
Confidence 999753
No 163
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=35.50 E-value=2.4e+02 Score=25.09 Aligned_cols=104 Identities=13% Similarity=0.011 Sum_probs=63.3
Q ss_pred EEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCC--------ccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK--------SDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 272 il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~--------~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
++.++-....-..+.+++.+..+++.. ..++-.+..-++ ...+.++.+++.+++.|++-- ...
T Consensus 107 ~~vIAgpcs~es~e~a~~~a~~~k~aG------a~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~---te~ 177 (350)
T 1vr6_A 107 FTIIAGPCSVEGREMLMETAHFLSELG------VKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVV---TEA 177 (350)
T ss_dssp EEEEEECSBCCCHHHHHHHHHHHHHTT------CCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEE---EEC
T ss_pred eEEEEeCCCcCCHHHHHHHHHHHHHcC------CCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEE---EEe
Confidence 444444444677888888888887763 333333332111 134677889999999998722 233
Q ss_pred CCHHHHHHHHHhCcEEEEcCC-CCCCChHHHHH-HHhCCceEeeC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMI-DEHFGISVVEY-MAAGAIPIGKH 386 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~-~E~~~~~vlEA-ma~G~PVI~~~ 386 (388)
.+.+.+..+-.-+|++=.+|. .+.+ .++++ ...|+||+-++
T Consensus 178 ~d~~~~~~l~~~vd~lkIgAr~~~n~--~LL~~va~~~kPVilk~ 220 (350)
T 1vr6_A 178 LGEDDLPKVAEYADIIQIGARNAQNF--RLLSKAGSYNKPVLLKR 220 (350)
T ss_dssp SSGGGHHHHHHHCSEEEECGGGTTCH--HHHHHHHTTCSCEEEEC
T ss_pred CCHHHHHHHHHhCCEEEECcccccCH--HHHHHHHccCCcEEEcC
Confidence 333444444444898888875 3443 44444 45899999775
No 164
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=34.89 E-value=27 Score=25.18 Aligned_cols=62 Identities=18% Similarity=0.007 Sum_probs=40.1
Q ss_pred HHHHHHHHHhcCCCCcEEEccCCCH-HHH-HHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 322 LQSLKDKSIELKVDGNVEFYKNLLY-RDL-VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 322 ~~~l~~~~~~~~l~~~V~~~g~v~~-~~l-~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.+.|++.++++|++-.|+-.|...- +.+ .+-...||++++.+..+--. .| -..|+|++-...
T Consensus 22 AeaLekaA~~~G~~ikVEtqgs~g~~n~Lt~~~I~~AD~VIia~d~~v~~---~~-RF~gk~v~~~~v 85 (106)
T 2m1z_A 22 AQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRN---KE-RFDGKVVLEVPV 85 (106)
T ss_dssp HHHHHHHHHHHTCEEEEEEEETTEESSCCCHHHHHHCSEEEEEESSCCST---HH-HHTTSEEEEECT
T ss_pred HHHHHHHHHHCCCEEEEEEecCccccCCCCHHHHhhCCEEEEeccccccc---hh-ccCCCcEEEEcH
Confidence 4689999999999877887776431 122 34567999888876543211 12 234888887654
No 165
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=34.89 E-value=78 Score=27.86 Aligned_cols=68 Identities=7% Similarity=-0.079 Sum_probs=43.1
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++ +... +++.+++. .+|+++..+....-.-.+.+|+.+|+
T Consensus 27 ~~~~l~av~d~----~~~---~~~~~a~~~g----~~~~-----~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk 90 (344)
T 3euw_A 27 PDLELVVIADP----FIE---GAQRLAEANG----AEAV-----ASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGI 90 (344)
T ss_dssp TTEEEEEEECS----SHH---HHHHHHHTTT----CEEE-----SSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEECC----CHH---HHHHHHHHcC----Ccee-----CCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCC
Confidence 67777755432 322 4556666664 2222 45566777 78988877655443445678999999
Q ss_pred ceEeeC
Q 016535 381 IPIGKH 386 (388)
Q Consensus 381 PVI~~~ 386 (388)
+|++-.
T Consensus 91 ~v~~EK 96 (344)
T 3euw_A 91 PALCEK 96 (344)
T ss_dssp CEEECS
T ss_pred cEEEEC
Confidence 999743
No 166
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=34.51 E-value=2.6e+02 Score=25.22 Aligned_cols=103 Identities=15% Similarity=0.009 Sum_probs=64.6
Q ss_pred EEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCC--------ccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK--------SDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 272 il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~--------~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
++.+|-...+ ..+.+++.+..+++. ...++..|...++ -..+....|.+..++.|++ .+...
T Consensus 144 ~~Iigpcsve-s~e~a~~~a~~~k~a------Ga~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~---~~te~ 213 (385)
T 3nvt_A 144 VFVFGPCSVE-SYEQVAAVAESIKAK------GLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLG---VISEI 213 (385)
T ss_dssp EEEEECSBCC-CHHHHHHHHHHHHHT------TCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCE---EEEEC
T ss_pred EEEEEeCCcC-CHHHHHHHHHHHHHc------CCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCE---EEEec
Confidence 3444444433 788888888888765 3456655542110 1246678889999999886 22333
Q ss_pred CCHHHHHHHHHhCcEEEEcCCC-CCCChHHH-HHHHhCCceEeeC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMID-EHFGISVV-EYMAAGAIPIGKH 386 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~~-E~~~~~vl-EAma~G~PVI~~~ 386 (388)
.+.+.+..+-.-+|++=.+|.. +.+ .++ ++-..|+||+.++
T Consensus 214 ~d~~~~~~l~~~vd~lkIgs~~~~n~--~LL~~~a~~gkPVilk~ 256 (385)
T 3nvt_A 214 VTPADIEVALDYVDVIQIGARNMQNF--ELLKAAGRVDKPILLKR 256 (385)
T ss_dssp CSGGGHHHHTTTCSEEEECGGGTTCH--HHHHHHHTSSSCEEEEC
T ss_pred CCHHHHHHHHhhCCEEEECcccccCH--HHHHHHHccCCcEEEec
Confidence 3445555555558988888753 443 544 4557899999875
No 167
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=34.37 E-value=51 Score=29.04 Aligned_cols=73 Identities=11% Similarity=0.101 Sum_probs=43.9
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+.+.+..+. .+++.+..+++++.. ..+ +++.+++.. .|+++..+....-.-.+.+|+.+|+
T Consensus 23 ~~~~lvav~d~~~~~~---~~~~~~~~~~~~~~~--~~~-----~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGk 92 (337)
T 3ip3_A 23 EECSITGIAPGVPEED---LSKLEKAISEMNIKP--KKY-----NNWWEMLEKEKPDILVINTVFSLNGKILLEALERKI 92 (337)
T ss_dssp TTEEEEEEECSSTTCC---CHHHHHHHHTTTCCC--EEC-----SSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEecCCchhh---HHHHHHHHHHcCCCC--ccc-----CCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCC
Confidence 6888887776533111 235666666666532 222 344555554 7877776544322234789999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 93 hVl~E 97 (337)
T 3ip3_A 93 HAFVE 97 (337)
T ss_dssp EEEEC
T ss_pred cEEEe
Confidence 99874
No 168
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=34.13 E-value=53 Score=30.05 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=36.0
Q ss_pred HHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh-------CcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 324 SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG-------AVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 324 ~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~-------adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
..++.+++++++.. ..+ .++.+++.. .|+++..+....-.-.+.+|+.+|++|++-
T Consensus 78 ~a~~~a~~~g~~~~-~~~-----~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~E 140 (417)
T 3v5n_A 78 KAEASGRELGLDPS-RVY-----SDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICD 140 (417)
T ss_dssp HHHHHHHHHTCCGG-GBC-----SCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHcCCCcc-ccc-----CCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCCeEEEE
Confidence 56677777776521 111 345556655 898777765543334568899999999974
No 169
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=34.06 E-value=63 Score=24.85 Aligned_cols=28 Identities=14% Similarity=0.121 Sum_probs=22.8
Q ss_pred CCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 47 gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
.|..++++..+++.|.+.| +++.++.-.
T Consensus 15 ~GnT~~iA~~ia~~l~~~g--~~v~~~~~~ 42 (159)
T 3fni_A 15 YGYSDRLAQAIINGITKTG--VGVDVVDLG 42 (159)
T ss_dssp STTHHHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred ChHHHHHHHHHHHHHHHCC--CeEEEEECc
Confidence 3699999999999999999 676666543
No 170
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=33.97 E-value=26 Score=21.69 Aligned_cols=33 Identities=9% Similarity=0.080 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC
Q 016535 321 RLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA 356 (388)
Q Consensus 321 ~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a 356 (388)
...++++.+++.|++ |--.|.+|. ++.+.|..+
T Consensus 14 ~~~aIR~WAr~nG~~--VsdRGRIp~-~V~eAY~aA 46 (55)
T 2kng_A 14 QSAAIREWARRNGHN--VSTRGRIPA-DVIDAYHAA 46 (55)
T ss_dssp HHHHHHHHHHHTTCC--CCSSSCCCH-HHHHHHHHH
T ss_pred ChHHHHHHHHHcCCc--CCCCCCCCH-HHHHHHHHc
Confidence 356899999999987 777899985 556666554
No 171
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=33.87 E-value=80 Score=28.03 Aligned_cols=48 Identities=10% Similarity=0.182 Sum_probs=35.8
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHH
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR 87 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~ 87 (388)
+=+.++|+|+ |.+.+++..++.++.+.| .++++.++....+++.+.++
T Consensus 172 ~l~glkva~v-------GD~~rva~Sl~~~~~~~G--~~v~~~~P~~~~~~~~~~~~ 219 (339)
T 4a8t_A 172 KLEDCKVVFV-------GDATQVCFSLGLITTKMG--MNFVHFGPEGFQLNEEHQAK 219 (339)
T ss_dssp CGGGCEEEEE-------SSCCHHHHHHHHHHHHTT--CEEEEECCTTSSCCHHHHHH
T ss_pred CCCCCEEEEE-------CCCchhHHHHHHHHHHcC--CEEEEECCcccCCCHHHHHH
Confidence 4568899987 444789999999999999 89999888764444444443
No 172
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=33.66 E-value=66 Score=28.50 Aligned_cols=68 Identities=10% Similarity=0.048 Sum_probs=42.4
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHH--HhCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLL--GGAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~--~~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++.+ . + +++.+++ ...|+++..+....-.-.+.+|+.+|+
T Consensus 28 ~~~~lvav~d~----~~~---~~~~~~~~~g~~--~----~---~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk 91 (354)
T 3db2_A 28 EKLKLVTCYSR----TED---KREKFGKRYNCA--G----D---ATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGK 91 (354)
T ss_dssp SSEEEEEEECS----SHH---HHHHHHHHHTCC--C----C---SSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTC
T ss_pred CCcEEEEEECC----CHH---HHHHHHHHcCCC--C----c---CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCC
Confidence 67777755432 332 455566666654 1 1 4556667 458887776655443344678999999
Q ss_pred ceEeeC
Q 016535 381 IPIGKH 386 (388)
Q Consensus 381 PVI~~~ 386 (388)
+|++-.
T Consensus 92 ~vl~EK 97 (354)
T 3db2_A 92 HIYVEK 97 (354)
T ss_dssp EEEEES
T ss_pred EEEEcc
Confidence 999753
No 173
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=33.64 E-value=56 Score=27.94 Aligned_cols=48 Identities=17% Similarity=0.186 Sum_probs=30.7
Q ss_pred hhcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 27 HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 27 ~~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
+..++++...|+++.|..... -...++..+-+++.+.| +++.+.....
T Consensus 8 r~L~~~~s~~Igvi~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~~ 55 (303)
T 3kke_A 8 RALRHSRSGTIGLIVPDVNNA-VFADMFSGVQMAASGHS--TDVLLGQIDA 55 (303)
T ss_dssp ---------CEEEEESCTTST-THHHHHHHHHHHHHHTT--CCEEEEECCS
T ss_pred HHHhhCCCCEEEEEeCCCcCh-HHHHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 344566778899999988655 56777788889999999 7777766553
No 174
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=33.55 E-value=78 Score=28.42 Aligned_cols=119 Identities=10% Similarity=-0.005 Sum_probs=67.2
Q ss_pred CCEEEE--CChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC----------CCCCCCcEEEEEcccCCCCC-hHHHH
Q 016535 222 ADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----------ERSTEYPAIISVAQFRPEKA-HPLQL 288 (388)
Q Consensus 222 a~~ii~--~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~----------~~~~~~~~il~vgrl~~~Kg-~~~ll 288 (388)
+|.|+. .++...+.+.+.-+ +-||.-+ + +...|... ...-+...+.|+|-.. .| ...++
T Consensus 127 ~D~IviR~~~~~~~~~lA~~s~----vPVINa~-~-~~~HPtQaLaDl~Ti~E~~G~l~glkva~vGD~~--nnva~Sl~ 198 (365)
T 4amu_A 127 YDGIEFRGFAQSDVDALVKYSG----VPVWNGL-T-DDEHPTQIIADFMTMKEKFGNLKNKKIVFIGDYK--NNVGVSTM 198 (365)
T ss_dssp CSEEEEECSCHHHHHHHHHHHC----SCEEEEE-C-SSCCHHHHHHHHHHHHHHHSSCTTCEEEEESSTT--SHHHHHHH
T ss_pred CcEEEEecCChhHHHHHHHhCC----CCEEeCC-C-CCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCCC--cchHHHHH
Confidence 677766 35555566665543 2244433 3 22332210 0113457899999762 12 23444
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeCCCCCc--cHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC
Q 016535 289 EAFSVALRKLDADLPRPRLQFVGSCRNKS--DEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 289 ~a~~~l~~~~~~~~~~~~l~ivG~~~~~~--~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~ 364 (388)
.+++.+ .+.+.++|...... +.+..+..++.+++.|. .+.+. +++.+.++.||++..-.|
T Consensus 199 ~~~~~l---------G~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~--~i~~~-----~d~~eav~~aDVVytd~W 260 (365)
T 4amu_A 199 IGAAFN---------GMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGG--SLRFS-----TDKILAAQDADVIYTDVW 260 (365)
T ss_dssp HHHHHT---------TCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSC--EEEEE-----SCHHHHTTTCSEEEECCS
T ss_pred HHHHHc---------CCEEEEECCccccCCCcHHHHHHHHHHHHHcCC--EEEEE-----CCHHHHhcCCCEEEeccc
Confidence 555444 78999999754333 44555566666676663 35543 456778999998776543
No 175
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=33.54 E-value=1e+02 Score=27.20 Aligned_cols=77 Identities=8% Similarity=0.010 Sum_probs=48.5
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCC--ccHHHHHHHHHHHHh--cCCCCcEEEccCCC
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK--SDEERLQSLKDKSIE--LKVDGNVEFYKNLL 345 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~--~~~~~~~~l~~~~~~--~~l~~~V~~~g~v~ 345 (388)
..+.++|-+. ..=...++.++..+ .+.+.+++..... .+.+..+..++.+++ .| ..+...
T Consensus 162 l~va~vGD~~-~~va~Sl~~~~~~~---------G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g--~~v~~~---- 225 (328)
T 3grf_A 162 IKFAYCGDSM-NNVTYDLMRGCALL---------GMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTG--GSIKIF---- 225 (328)
T ss_dssp CCEEEESCCS-SHHHHHHHHHHHHH---------TCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCC--CEEEEE----
T ss_pred cEEEEeCCCC-cchHHHHHHHHHHc---------CCEEEEECChHhhhCCCHHHHHHHHHHHhhccCC--CeEEEE----
Confidence 6689999762 11134455555555 7899999975444 445555666666665 44 235443
Q ss_pred HHHHHHHHHhCcEEEEcC
Q 016535 346 YRDLVKLLGGAVVGIHSM 363 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps 363 (388)
+++.+.++.||++....
T Consensus 226 -~d~~eav~~aDvvytd~ 242 (328)
T 3grf_A 226 -HDCKKGCEGVDVVYTDS 242 (328)
T ss_dssp -SSHHHHHTTCSEEEECC
T ss_pred -cCHHHHhcCCCEEEecC
Confidence 45677899999877653
No 176
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=33.35 E-value=1.5e+02 Score=27.20 Aligned_cols=81 Identities=10% Similarity=-0.043 Sum_probs=50.1
Q ss_pred CcEEEEEcccCC--CCCh---HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 269 YPAIISVAQFRP--EKAH---PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 269 ~~~il~vgrl~~--~Kg~---~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
...+.++|.... -.|. ..++.++..+ .+.+.+++........+..+..++.+++.|. .+...
T Consensus 188 Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~l---------G~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~--~v~~~-- 254 (418)
T 2yfk_A 188 GKKVAMTWAYSPSYGKPLSVPQGIVGLMTRL---------GMDVVLAHPEGYEIMPEVEEVAKKNAAEFGG--NFTKT-- 254 (418)
T ss_dssp TCEEEEECCCCSSSCCCSHHHHHHHHHHGGG---------TCEEEEECCTTCCCCHHHHHHHHHHHHHHSS--EEEEE--
T ss_pred CCEEEEEeccccccCccchHHHHHHHHHHHc---------CCEEEEECCccccCCHHHHHHHHHHHHHcCC--EEEEE--
Confidence 367888875332 2221 4455555544 7899999975433344555555666666663 34443
Q ss_pred CCHHHHHHHHHhCcEEEEcCCC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMID 365 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~~ 365 (388)
+++.+.+..||++....|.
T Consensus 255 ---~d~~eav~~ADVVytd~W~ 273 (418)
T 2yfk_A 255 ---NSMAEAFKDADVVYPKSWA 273 (418)
T ss_dssp ---SCHHHHHTTCSEEEECCCC
T ss_pred ---cCHHHHhcCCCEEEEcccc
Confidence 4667789999988876553
No 177
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=33.32 E-value=59 Score=27.25 Aligned_cols=44 Identities=9% Similarity=-0.041 Sum_probs=32.5
Q ss_pred ccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
|+++..+|+++.|..... -...++..+.+++.+.| +++.+....
T Consensus 1 ~~~~~~~Igvi~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 44 (280)
T 3gyb_A 1 MSLRTQLIAVLIDDYSNP-WFIDLIQSLSDVLTPKG--YRLSVIDSL 44 (280)
T ss_dssp ---CCCEEEEEESCTTSG-GGHHHHHHHHHHHGGGT--CEEEEECSS
T ss_pred CCCccCEEEEEeCCCCCh-HHHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 456778999999987554 56677778889999999 777776655
No 178
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=33.19 E-value=46 Score=25.01 Aligned_cols=27 Identities=11% Similarity=0.100 Sum_probs=21.8
Q ss_pred CCChhhHHHHHHHHHhhcCCCceEEEEec
Q 016535 47 GGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (388)
Q Consensus 47 gGG~~~~~~~l~~~L~~~g~~~~v~v~~~ 75 (388)
.|..++++..+++.|.+.| +++.++.-
T Consensus 12 tGnT~~~A~~ia~~l~~~g--~~v~~~~~ 38 (148)
T 3f6r_A 12 TGNTESIAQKLEELIAAGG--HEVTLLNA 38 (148)
T ss_dssp SSHHHHHHHHHHHHHHTTT--CEEEEEET
T ss_pred CchHHHHHHHHHHHHHhCC--CeEEEEeh
Confidence 4688999999999999999 67666543
No 179
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=33.16 E-value=49 Score=23.93 Aligned_cols=41 Identities=5% Similarity=0.054 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC
Q 016535 321 RLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 321 ~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~ 364 (388)
...++++.+++.+++..|...+. .++......+|+++.+..
T Consensus 38 l~~kl~~~~~~~gi~~~V~~~~~---~~~~~~~~~~DlIist~~ 78 (113)
T 1tvm_A 38 AAEEIKELCQSHNIPVELIQCRV---NEIETYMDGVHLICTTAR 78 (113)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECT---TTTTTSTTSCSEEEESSC
T ss_pred HHHHHHHHHHHcCCeEEEEEecH---HHHhhccCCCCEEEECCc
Confidence 46788888998888644555443 344445678998888764
No 180
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=32.97 E-value=54 Score=23.96 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=23.7
Q ss_pred cceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
.|+|+++ |++.+-..+++.|.+.| ++|+++...
T Consensus 4 ~m~i~Ii--------G~G~iG~~~a~~L~~~g--~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA--------GIGRVGYTLAKSLSEKG--HDIVLIDID 36 (140)
T ss_dssp -CEEEEE--------CCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CCEEEEE--------CCCHHHHHHHHHHHhCC--CeEEEEECC
Confidence 4778777 23566667889999999 788887653
No 181
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=32.70 E-value=85 Score=28.06 Aligned_cols=48 Identities=10% Similarity=0.182 Sum_probs=35.8
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHH
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR 87 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~ 87 (388)
+=+.++|+|+ |.+.+++..++..+.+.| .++++.++....+++.+.+.
T Consensus 150 ~l~glkva~v-------GD~~rva~Sl~~~~~~~G--~~v~~~~P~~~~p~~~~~~~ 197 (355)
T 4a8p_A 150 KLEDCKVVFV-------GDATQVCFSLGLITTKMG--MNFVHFGPEGFQLNEEHQAK 197 (355)
T ss_dssp CGGGCEEEEE-------SCCCHHHHHHHHHHHHTT--CEEEEECCTTSSCCHHHHHH
T ss_pred CCCCCEEEEE-------CCCchhHHHHHHHHHHcC--CEEEEECCCccCCCHHHHHH
Confidence 4568899987 444789999999999999 89999888764444444443
No 182
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=32.67 E-value=2.2e+02 Score=23.74 Aligned_cols=8 Identities=0% Similarity=-0.151 Sum_probs=4.0
Q ss_pred CcEEEEEe
Q 016535 304 RPRLQFVG 311 (388)
Q Consensus 304 ~~~l~ivG 311 (388)
++.+.+..
T Consensus 38 g~~~~~~~ 45 (293)
T 3l6u_A 38 KYEALVAT 45 (293)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEC
Confidence 45555544
No 183
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=32.62 E-value=75 Score=28.14 Aligned_cols=67 Identities=10% Similarity=-0.010 Sum_probs=41.9
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++.+ .. +++.+++. ..|+++..+....-.-.+.+|+.+|+
T Consensus 51 ~~~~l~av~d~----~~~---~~~~~a~~~g~~----~~-----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk 114 (350)
T 3rc1_A 51 PLTEVTAIASR----RWD---RAKRFTERFGGE----PV-----EGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGK 114 (350)
T ss_dssp TTEEEEEEEES----SHH---HHHHHHHHHCSE----EE-----ESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHHTTC
T ss_pred CCeEEEEEEcC----CHH---HHHHHHHHcCCC----Cc-----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCC
Confidence 67887755432 332 455666666653 11 34555665 58888877655443345678999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 115 ~Vl~E 119 (350)
T 3rc1_A 115 HVLAE 119 (350)
T ss_dssp EEEEE
T ss_pred cEEEe
Confidence 99874
No 184
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=32.53 E-value=49 Score=28.01 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=31.9
Q ss_pred cccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
.++++..+|+++.|..... -...++..+-+++.+.| +++.++....
T Consensus 3 L~~~~~~~Igvv~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~~ 48 (291)
T 3egc_A 3 LRSKRSNVVGLIVSDIENV-FFAEVASGVESEARHKG--YSVLLANTAE 48 (291)
T ss_dssp ----CCCEEEEEESCTTSH-HHHHHHHHHHHHHHHTT--CEEEEEECTT
T ss_pred CccCCCcEEEEEECCCcch-HHHHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 4567788999999987544 45566777888888999 7877776543
No 185
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=32.52 E-value=40 Score=28.29 Aligned_cols=46 Identities=4% Similarity=0.082 Sum_probs=29.2
Q ss_pred cccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
.++++..+|+++.|..... -...++..+.+++.+.| +++.++....
T Consensus 3 L~~~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~~~~~g--~~~~~~~~~~ 48 (277)
T 3e61_A 3 LYKRKSKLIGLLLPDMSNP-FFTLIARGVEDVALAHG--YQVLIGNSDN 48 (277)
T ss_dssp -------CEEEEESCTTSH-HHHHHHHHHHHHHHHTT--CCEEEEECTT
T ss_pred CccCCCCEEEEEECCCCCH-HHHHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 4566778899999987544 45666777888899999 7777766553
No 186
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=32.38 E-value=70 Score=27.03 Aligned_cols=48 Identities=13% Similarity=0.198 Sum_probs=31.0
Q ss_pred hcccCccceEEEeccccCC-CCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 28 NARRNRTTSVAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~-gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
..++++..+|+++.|.... ..-...++..+.+++.+.| +++.+.....
T Consensus 2 ~L~~~~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g--~~~~~~~~~~ 50 (288)
T 3gv0_A 2 SLRTGKTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQ--YHLVVTPHIH 50 (288)
T ss_dssp -----CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSS--CEEEECCBSS
T ss_pred CcccCCCCEEEEEecCCccccHHHHHHHHHHHHHHHHcC--CEEEEecCCc
Confidence 3467778899999998743 1145566677778888899 7777765543
No 187
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=32.32 E-value=1e+02 Score=26.72 Aligned_cols=67 Identities=10% Similarity=-0.098 Sum_probs=39.4
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCce
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP 382 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PV 382 (388)
++++++-+-+.+. + ..++.+++++.+ ... +.+++ -..+|+++..+....-.-.+.+|+.+|++|
T Consensus 29 ~~~~lvav~d~~~-~------~~~~~~~~~g~~----~~~--~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~~v 92 (319)
T 1tlt_A 29 SDWTLQGAWSPTR-A------KALPICESWRIP----YAD--SLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGVHV 92 (319)
T ss_dssp SSEEEEEEECSSC-T------THHHHHHHHTCC----BCS--SHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEECCCH-H------HHHHHHHHcCCC----ccC--cHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCCeE
Confidence 5777774443321 1 344555566543 222 22443 467898887765544344567899999999
Q ss_pred Eee
Q 016535 383 IGK 385 (388)
Q Consensus 383 I~~ 385 (388)
++-
T Consensus 93 ~~e 95 (319)
T 1tlt_A 93 CVD 95 (319)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 188
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=32.27 E-value=29 Score=17.30 Aligned_cols=12 Identities=25% Similarity=0.315 Sum_probs=8.4
Q ss_pred HHHHHHHhhccc
Q 016535 20 LILASHVHNARR 31 (388)
Q Consensus 20 ~~~~~~~~~~~~ 31 (388)
=.+.+.++|||.
T Consensus 14 P~liSWiK~kr~ 25 (26)
T 3qrx_B 14 PALISWIKRKRQ 25 (26)
T ss_pred hHHHHHHHHHhc
Confidence 345788888875
No 189
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=32.16 E-value=76 Score=25.67 Aligned_cols=26 Identities=15% Similarity=0.424 Sum_probs=21.4
Q ss_pred ChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 49 GGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 49 G~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
|++++-..+++.|.+.| ++|+++..+
T Consensus 7 G~G~~G~~la~~L~~~g--~~v~vid~~ 32 (218)
T 3l4b_C 7 GGETTAYYLARSMLSRK--YGVVIINKD 32 (218)
T ss_dssp CCHHHHHHHHHHHHHTT--CCEEEEESC
T ss_pred CCCHHHHHHHHHHHhCC--CeEEEEECC
Confidence 45788889999999999 788888754
No 190
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=32.02 E-value=2.1e+02 Score=23.33 Aligned_cols=49 Identities=8% Similarity=0.091 Sum_probs=22.6
Q ss_pred HHHHHHhcCCCCcEEEccCC---C----HHHHHHHHH--hCcEEEEcCCCCCCChHHHHH
Q 016535 325 LKDKSIELKVDGNVEFYKNL---L----YRDLVKLLG--GAVVGIHSMIDEHFGISVVEY 375 (388)
Q Consensus 325 l~~~~~~~~l~~~V~~~g~v---~----~~~l~~~~~--~adv~v~ps~~E~~~~~vlEA 375 (388)
..+.++++|++ +...... + ++++.+.++ +.|++|+..+.--.+-.++++
T Consensus 43 ~~~~A~~~gIp--~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~ 100 (216)
T 2ywr_A 43 AIERCKKHNVE--CKVIQRKEFPSKKEFEERMALELKKKGVELVVLAGFMRILSHNFLKY 100 (216)
T ss_dssp HHHHHHHHTCC--EEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTT
T ss_pred HHHHHHHcCCC--EEEeCcccccchhhhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhh
Confidence 45556666665 3332211 1 234444444 355666554444444444443
No 191
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=31.96 E-value=30 Score=28.18 Aligned_cols=92 Identities=11% Similarity=-0.122 Sum_probs=53.0
Q ss_pred CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC-CcEEEc-cCCCHHHHHHHHHhCcE
Q 016535 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEFY-KNLLYRDLVKLLGGAVV 358 (388)
Q Consensus 281 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-~~V~~~-g~v~~~~l~~~~~~adv 358 (388)
.|=...+.+|+..+.... .-.+.++|.... ..+.+.+.++..|.. -+=+|+ |..++..+ +.+..=|+
T Consensus 46 ~kT~~~L~~A~~~i~~~~-----~~~ilfV~tk~~-----~~~~V~k~A~~~g~~~v~~rw~gG~lTN~~~-~~~~~Pdl 114 (202)
T 3j20_B 46 RKTDERLKVAGKFLAKFE-----PQSILAVSVRLY-----GQKPVKKFGEVTGARAIPGRFLPGTMTNPAV-KNFFEPDV 114 (202)
T ss_dssp HHHHHHHHHHHHHHHHSC-----SSCEEEECCCTT-----THHHHHHHHHHHSCCCCCSSCCSSSSSCSSS-SSCCCCSE
T ss_pred HHHHHHHHHHHHHHHhhC-----CCeEEEEecChH-----HHHHHHHHHHHHCCceeCceecCCCcccHhH-HhccCCCe
Confidence 344566777777665542 456778887432 234566666665542 122344 44443322 22345566
Q ss_pred EEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 359 GIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 359 ~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
++.....+ =..++.||...|.|+|+
T Consensus 115 lvv~Dp~~-d~~ai~EA~~l~IP~Ia 139 (202)
T 3j20_B 115 LIVTDPRA-DHQAMREAVEIGIPIVA 139 (202)
T ss_dssp EEESCTTT-SHHHHHHHHHHTCCEEE
T ss_pred EEEeCCcc-chHHHHHHHHcCCCEEE
Confidence 66654322 24678999999999997
No 192
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=31.88 E-value=52 Score=27.79 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=31.1
Q ss_pred cccCccceEEEeccc-----cCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 29 ARRNRTTSVAFFHPN-----TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~-----~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
.++++..+|+++.|. .... -...++..+.+++.+.| +++.++...
T Consensus 3 L~~~~~~~Igvi~~~~~~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 52 (292)
T 3k4h_A 3 LANQTTKTLGLVMPSSASKAFQNP-FFPEVIRGISSFAHVEG--YALYMSTGE 52 (292)
T ss_dssp ----CCCEEEEECSSCHHHHTTST-HHHHHHHHHHHHHHHTT--CEEEECCCC
T ss_pred cccCCCCEEEEEecCCccccccCH-HHHHHHHHHHHHHHHcC--CEEEEEeCC
Confidence 467778899999998 5444 55667777888899999 777765543
No 193
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=31.81 E-value=50 Score=28.05 Aligned_cols=47 Identities=15% Similarity=0.121 Sum_probs=29.0
Q ss_pred hhcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 27 HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 27 ~~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
|.+++++..+|+++.|..... -...++..+.+++.+.| +++.+....
T Consensus 9 ~~~~~~~s~~Igvi~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 55 (289)
T 2fep_A 9 HHGSSKKTTTVGVIIPDISSI-FYSELARGIEDIATMYK--YNIILSNSD 55 (289)
T ss_dssp -------CCEEEEEESCTTSH-HHHHHHHHHHHHHHHTT--CEEEEEECT
T ss_pred cccccCCCCeEEEEeCCCCCc-hHHHHHHHHHHHHHHcC--CEEEEEeCC
Confidence 566788888999999986433 34556667778888899 777766543
No 194
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=31.80 E-value=71 Score=30.05 Aligned_cols=100 Identities=11% Similarity=-0.023 Sum_probs=62.1
Q ss_pred CCChHHHHHHHHH-HHHH--hc--CCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh
Q 016535 281 EKAHPLQLEAFSV-ALRK--LD--ADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG 355 (388)
Q Consensus 281 ~Kg~~~ll~a~~~-l~~~--~~--~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ 355 (388)
..|.+.+++++.. +.++ .. ....+-.+.|+|......| ..+++++.+++|++-++.+.|.-+-+|+..+- .
T Consensus 192 ~~G~~~a~~al~~~l~~~~~~~~~~~~~~~~VNIiG~~~~~gD---~~eik~lL~~~Gi~v~~~~~g~~t~~ei~~~~-~ 267 (492)
T 3u7q_A 192 SLGHHIANDAVRDWVLGKRDEDTTFASTPYDVAIIGDYNIGGD---AWSSRILLEEMGLRCVAQWSGDGSISEIELTP-K 267 (492)
T ss_dssp HHHHHHHHHHHHHHTTTTTTTCCCCCCCTTEEEEEEECCBTTT---THHHHHHHHHTTCEEEEEEETTCCHHHHHHGG-G
T ss_pred hHHHHHHHHHHHHHHhhhcccccccCCCCCcEEEECCCCChhh---HHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhh-c
Confidence 3467777777665 4332 00 1123567888986532222 35899999999998777788887788888765 5
Q ss_pred CcEEEEcCCCCCCChHHHHHH--HhCCceEeeC
Q 016535 356 AVVGIHSMIDEHFGISVVEYM--AAGAIPIGKH 386 (388)
Q Consensus 356 adv~v~ps~~E~~~~~vlEAm--a~G~PVI~~~ 386 (388)
|++-+..+.. ++....+.| .+|.|.+..+
T Consensus 268 A~~niv~~~~--~~~~~A~~Le~~~GiP~i~~~ 298 (492)
T 3u7q_A 268 VKLNLVHCYR--SMNYISRHMEEKYGIPWMEYN 298 (492)
T ss_dssp CSEEEESCHH--HHHHHHHHHHHHHCCCEEECC
T ss_pred CcEEEEEChH--HHHHHHHHHHHHhCCceEecC
Confidence 5555543211 234555555 4788887643
No 195
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=31.54 E-value=50 Score=27.98 Aligned_cols=46 Identities=13% Similarity=0.069 Sum_probs=28.1
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
..|+++..+|+++.|..... -...++..+.+++.+.| +++.+....
T Consensus 2 ~L~~~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 47 (290)
T 2rgy_A 2 SLATQQLGIIGLFVPTFFGS-YYGTILKQTDLELRAVH--RHVVVATGC 47 (290)
T ss_dssp ------CCEEEEECSCSCSH-HHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CcccCCCCeEEEEeCCCCCc-hHHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 34567778999999886332 34455566777888889 777766544
No 196
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=31.43 E-value=2.7e+02 Score=24.44 Aligned_cols=95 Identities=14% Similarity=0.101 Sum_probs=51.8
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH---
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY--- 346 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~--- 346 (388)
.+|++.|. .+....+++.+.+.. -++..++. .+++.+. ...+.+.+++++++ +........
T Consensus 23 mrIvf~G~------~~fa~~~L~~L~~~~----~~i~~Vvt--~pd~~~~--~~~v~~~A~~~gIp--v~~~~~~~~~~~ 86 (329)
T 2bw0_A 23 MKIAVIGQ------SLFGQEVYCHLRKEG----HEVVGVFT--VPDKDGK--ADPLGLEAEKDGVP--VFKYSRWRAKGQ 86 (329)
T ss_dssp CEEEEECC------HHHHHHHHHHHHHTT----CEEEEEEE--CCCCSSC--CCHHHHHHHHHTCC--EEECSCCEETTE
T ss_pred CEEEEEcC------cHHHHHHHHHHHHCC----CeEEEEEe--CCCcCCC--CCHHHHHHHHcCCC--EEecCccccccc
Confidence 56777763 345555666665542 24444444 2221100 01456778888887 444443321
Q ss_pred --HHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 347 --RDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 347 --~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
+++.+.++. .|++|...+..-.|-.++++...|+
T Consensus 87 ~~~~~~~~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~ 124 (329)
T 2bw0_A 87 ALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGS 124 (329)
T ss_dssp ECHHHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCE
T ss_pred ccHHHHHHHHhcCCCEEEEeehhhhCCHHHHhhCcCCE
Confidence 456666654 6788877766666666666555443
No 197
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=31.43 E-value=1.1e+02 Score=26.16 Aligned_cols=71 Identities=4% Similarity=-0.169 Sum_probs=48.5
Q ss_pred CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc-cCCCHHHHHHHHHhCcEE
Q 016535 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY-KNLLYRDLVKLLGGAVVG 359 (388)
Q Consensus 281 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~-g~v~~~~l~~~~~~adv~ 359 (388)
..|++.+++.++.. .+.-+++.+.+..+ .+++.+.++++|+. .+.+. +.-+.+.+..+.+.++-|
T Consensus 109 ~~g~e~f~~~~~~a---------Gvdgvii~Dlp~ee----~~~~~~~~~~~gl~-~i~liaP~t~~eri~~i~~~~~gf 174 (267)
T 3vnd_A 109 ANGIDEFYTKAQAA---------GVDSVLIADVPVEE----SAPFSKAAKAHGIA-PIFIAPPNADADTLKMVSEQGEGY 174 (267)
T ss_dssp HHCHHHHHHHHHHH---------TCCEEEETTSCGGG----CHHHHHHHHHTTCE-EECEECTTCCHHHHHHHHHHCCSC
T ss_pred HhhHHHHHHHHHHc---------CCCEEEeCCCCHhh----HHHHHHHHHHcCCe-EEEEECCCCCHHHHHHHHHhCCCc
Confidence 45777777777766 66777777765543 45788888888886 45444 445678888898888855
Q ss_pred EEc-CCC
Q 016535 360 IHS-MID 365 (388)
Q Consensus 360 v~p-s~~ 365 (388)
|+. |..
T Consensus 175 vY~vS~~ 181 (267)
T 3vnd_A 175 TYLLSRA 181 (267)
T ss_dssp EEESCCC
T ss_pred EEEEecC
Confidence 544 443
No 198
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=31.21 E-value=96 Score=26.82 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=27.4
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
-..++.|..+.+ .+.+...++...|.+.| +++.++.+..
T Consensus 11 ~~vi~Np~sG~~-~~~~~~~~i~~~l~~~~--~~~~~~~t~~ 49 (304)
T 3s40_A 11 VLLIVNPKAGQG-DLHTNLTKIVPPLAAAF--PDLHILHTKE 49 (304)
T ss_dssp EEEEECTTCSSS-CHHHHHHHHHHHHHHHC--SEEEEEECCS
T ss_pred EEEEECcccCCC-chHHHHHHHHHHHHHcC--CeEEEEEccC
Confidence 345668887555 45567778889999999 6777765543
No 199
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.06 E-value=1.5e+02 Score=21.73 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=42.0
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCce
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP 382 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PV 382 (388)
.++.+++.|... ....++.++++.+|- .+...++. .++.+|.. +.-+-.+..|...|+||
T Consensus 24 ~g~~i~itG~~~-----~~r~~l~~~i~~~Gg----~v~~~~s~--------~~ThLI~~---~~~~~K~~~A~~~gi~I 83 (129)
T 2d8m_A 24 QGVVVVLSGFQN-----PFRSELRDKALELGA----KYRPDWTR--------DSTHLICA---FANTPKYSQVLGLGGRI 83 (129)
T ss_dssp TTEEEEEESCCT-----THHHHHHHHHHHTTE----EEESSCCT--------TCCEEEES---SSSCHHHHHHHHHTCEE
T ss_pred CCeEEEEeCCCc-----HHHHHHHHHHHHcCC----EEeCCcCC--------CCeEEEec---CCCChHHHHHHHCCCcE
Confidence 578888888642 124578888888763 34455532 36666665 33456777888889999
Q ss_pred EeeC
Q 016535 383 IGKH 386 (388)
Q Consensus 383 I~~~ 386 (388)
|..+
T Consensus 84 V~~~ 87 (129)
T 2d8m_A 84 VRKE 87 (129)
T ss_dssp EETH
T ss_pred ecHH
Confidence 8764
No 200
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=30.77 E-value=95 Score=25.81 Aligned_cols=29 Identities=17% Similarity=0.031 Sum_probs=20.9
Q ss_pred CcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 356 AVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 356 adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
=|+++.....+. ..++.||...|.|||+-
T Consensus 158 Pdll~v~Dp~~e-~~ai~EA~~l~IPvIai 186 (231)
T 3bbn_B 158 PDIVIIVDQQEE-YTALRECITLGIPTICL 186 (231)
T ss_dssp CSEEEESCTTTT-HHHHHHHHTTTCCEEEC
T ss_pred CCEEEEeCCccc-cHHHHHHHHhCCCEEEE
Confidence 566665543322 47899999999999983
No 201
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=30.68 E-value=55 Score=27.63 Aligned_cols=45 Identities=11% Similarity=0.085 Sum_probs=28.8
Q ss_pred cccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
.|+++..+|+++.|..... -...++..+.+++.+.| +++.+....
T Consensus 3 L~~~~~~~Igvi~~~~~~~-~~~~~~~gi~~~~~~~g--~~~~~~~~~ 47 (285)
T 3c3k_A 3 LRTAKTGMLLVMVSNIANP-FCAAVVKGIEKTAEKNG--YRILLCNTE 47 (285)
T ss_dssp ----CCCEEEEEESCTTSH-HHHHHHHHHHHHHHHTT--CEEEEEECT
T ss_pred CcCCCCCEEEEEeCCCCCc-hHHHHHHHHHHHHHHcC--CEEEEEeCC
Confidence 4567778999999986433 34455566777888889 777766543
No 202
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=30.63 E-value=62 Score=28.61 Aligned_cols=38 Identities=18% Similarity=0.025 Sum_probs=25.3
Q ss_pred HHHHHHHhCcEEEEcCCCC-CCChHHHHHHHhCCceEeeC
Q 016535 348 DLVKLLGGAVVGIHSMIDE-HFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E-~~~~~vlEAma~G~PVI~~~ 386 (388)
+..+++..+|+++..+-.. ++.. ...++.+|++||++.
T Consensus 72 d~~~l~~~vDvV~~aTp~~~h~~~-a~~~l~aGk~Vi~sa 110 (334)
T 2czc_A 72 TLNDLLEKVDIIVDATPGGIGAKN-KPLYEKAGVKAIFQG 110 (334)
T ss_dssp BHHHHHTTCSEEEECCSTTHHHHH-HHHHHHHTCEEEECT
T ss_pred cHHHhccCCCEEEECCCccccHHH-HHHHHHcCCceEeec
Confidence 3445566899888776433 2333 347888999999764
No 203
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=30.56 E-value=86 Score=26.62 Aligned_cols=43 Identities=9% Similarity=0.003 Sum_probs=27.9
Q ss_pred cccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCC
Q 016535 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHD 78 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~ 78 (388)
.+++++|+|++-..+-- .+.-+..|+++|.+ + ++|+|..++.+
T Consensus 6 ~~~~~~m~ILlTNDDGi----~apGi~aL~~~l~~-~--~~V~VVAP~~~ 48 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV----YAKGLAILAKTLAD-L--GEVDVVAPDRN 48 (261)
T ss_dssp -----CCEEEEECSSCT----TCHHHHHHHHHHTT-T--SEEEEEEESSC
T ss_pred hccCCCCeEEEEcCCCC----CCHHHHHHHHHHHh-c--CCEEEEecCCC
Confidence 34566799988876643 23457778888888 6 68888887754
No 204
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=30.49 E-value=2.2e+02 Score=23.36 Aligned_cols=21 Identities=10% Similarity=-0.165 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEe
Q 016535 286 LQLEAFSVALRKLDADLPRPRLQFVG 311 (388)
Q Consensus 286 ~ll~a~~~l~~~~~~~~~~~~l~ivG 311 (388)
.+++.+....++. ++.+.+..
T Consensus 17 ~~~~gi~~~~~~~-----g~~~~~~~ 37 (276)
T 3ksm_A 17 QVYLGAQKAADEA-----GVTLLHRS 37 (276)
T ss_dssp HHHHHHHHHHHHH-----TCEEEECC
T ss_pred HHHHHHHHHHHHc-----CCEEEEEC
Confidence 3444444444443 45555543
No 205
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=30.12 E-value=56 Score=29.62 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=35.4
Q ss_pred HHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh-------CcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 324 SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG-------AVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 324 ~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~-------adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
..++.++++++++. ..+ .++.+++.. .|+++..+....-.-.+.+|+.+|++|++-
T Consensus 53 ~a~~~a~~~g~~~~-~~~-----~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~E 115 (398)
T 3dty_A 53 RGSAFGEQLGVDSE-RCY-----ADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGLHVVCE 115 (398)
T ss_dssp HHHHHHHHTTCCGG-GBC-----SSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHhCCCcc-eee-----CCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEe
Confidence 56667777776521 111 345556654 897776654433234468999999999973
No 206
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=30.01 E-value=62 Score=27.93 Aligned_cols=49 Identities=14% Similarity=0.022 Sum_probs=27.4
Q ss_pred HHhhcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 25 HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 25 ~~~~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
+++.....+++++.-+. .- .|-|--+++.+||.+|+++| .+|.++-.+.
T Consensus 31 ~l~~~~~~~~~~vI~v~-~K-GGvGKTT~a~nLA~~La~~G--~~VlliD~D~ 79 (307)
T 3end_A 31 HLDEADKITGAKVFAVY-GK-GGIGKSTTSSNLSAAFSILG--KRVLQIGCDP 79 (307)
T ss_dssp ---------CCEEEEEE-CS-TTSSHHHHHHHHHHHHHHTT--CCEEEEEESS
T ss_pred hhccccccCCceEEEEE-CC-CCccHHHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 33333344455555444 33 22256667799999999999 7888886664
No 207
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=29.93 E-value=2.5e+02 Score=23.68 Aligned_cols=24 Identities=8% Similarity=0.086 Sum_probs=12.9
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeC
Q 016535 284 HPLQLEAFSVALRKLDADLPRPRLQFVGS 312 (388)
Q Consensus 284 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG~ 312 (388)
...+++.+....++. ++.+.+...
T Consensus 17 ~~~~~~gi~~~a~~~-----g~~~~~~~~ 40 (313)
T 3m9w_A 17 WQKDRDIFVKKAESL-----GAKVFVQSA 40 (313)
T ss_dssp THHHHHHHHHHHHHT-----SCEEEEEEC
T ss_pred HHHHHHHHHHHHHHc-----CCEEEEECC
Confidence 344555555555553 566666554
No 208
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=29.01 E-value=2e+02 Score=25.26 Aligned_cols=48 Identities=19% Similarity=0.177 Sum_probs=36.0
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHH
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR 87 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~ 87 (388)
+=+.++|+|+ |.+.+++..++.++...| .++++.++....+++.+.++
T Consensus 154 ~l~glkva~v-------GD~~rva~Sl~~~~~~~G--~~v~~~~P~~~~~~~~~~~~ 201 (323)
T 3gd5_A 154 RLAGLKLAYV-------GDGNNVAHSLLLGCAKVG--MSIAVATPEGFTPDPAVSAR 201 (323)
T ss_dssp CCTTCEEEEE-------SCCCHHHHHHHHHHHHHT--CEEEEECCTTCCCCHHHHHH
T ss_pred CCCCCEEEEE-------CCCCcHHHHHHHHHHHcC--CEEEEECCCcccCCHHHHHH
Confidence 4578999988 344789999999999999 89999888764444444443
No 209
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=28.91 E-value=2.3e+02 Score=25.22 Aligned_cols=65 Identities=8% Similarity=-0.016 Sum_probs=43.5
Q ss_pred cHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh-CcEEEEcCCCCCCChHHHHHHH-hCCceEeeC
Q 016535 318 DEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG-AVVGIHSMIDEHFGISVVEYMA-AGAIPIGKH 386 (388)
Q Consensus 318 ~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~-adv~v~ps~~E~~~~~vlEAma-~G~PVI~~~ 386 (388)
..+....|.+.+++.|++ .+....+.+.+.-+-.- +|++=.+|.. -....++++.+ .|+|||-+.
T Consensus 76 ~~e~~~~L~~~~~~~Gi~---~~st~fD~~svd~l~~~~v~~~KI~S~~-~~N~pLL~~va~~gKPviLst 142 (350)
T 3g8r_A 76 QPEQMQKLVAEMKANGFK---AICTPFDEESVDLIEAHGIEIIKIASCS-FTDWPLLERIARSDKPVVAST 142 (350)
T ss_dssp CHHHHHHHHHHHHHTTCE---EEEEECSHHHHHHHHHTTCCEEEECSSS-TTCHHHHHHHHTSCSCEEEEC
T ss_pred CHHHHHHHHHHHHHcCCc---EEeccCCHHHHHHHHHcCCCEEEECccc-ccCHHHHHHHHhhCCcEEEEC
Confidence 456677899999998875 34444555555544443 6777777643 55667777665 799999764
No 210
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=28.83 E-value=77 Score=26.68 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=27.8
Q ss_pred hhcccCccceEEEeccc--cCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 27 HNARRNRTTSVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 27 ~~~~~~~~~~I~~~~p~--~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+..++++..+|+++.|. .... -...++..+.+++.+.| +++.+....
T Consensus 12 r~L~~~~~~~Ig~i~~~~~~~~~-~~~~~~~gi~~~~~~~g--~~~~~~~~~ 60 (296)
T 3brq_A 12 RNLSAKSTQTLGLVVTNTLYHGI-YFSELLFHAARMAEEKG--RQLLLADGK 60 (296)
T ss_dssp -------CCEEEEEECGGGCC---CHHHHHHHHHHHHHHTT--CEEEEECCT
T ss_pred HHhhcCCCceEEEEeCCcccCCc-hHHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 34456677899999988 5433 44556667778888889 777766543
No 211
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=28.78 E-value=63 Score=27.31 Aligned_cols=43 Identities=7% Similarity=0.097 Sum_probs=27.7
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEE
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVY 73 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~ 73 (388)
..|+++..+|+++.|..... -...++..+.+++.+.| +++.+.
T Consensus 2 ~L~~~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~ 44 (290)
T 3clk_A 2 SLVKKSSNVIAAVVSSVRTN-FAQQILDGIQEEAHKNG--YNLIIV 44 (290)
T ss_dssp ------CCEEEEECCCCSSS-HHHHHHHHHHHHHHTTT--CEEEEE
T ss_pred CcccccCCEEEEEeCCCCCh-HHHHHHHHHHHHHHHcC--CeEEEE
Confidence 34567778999999986544 45556667778888889 777765
No 212
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=28.75 E-value=1.7e+02 Score=23.45 Aligned_cols=68 Identities=9% Similarity=0.028 Sum_probs=43.3
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCC---CCChHHHHHHHhC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE---HFGISVVEYMAAG 379 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E---~~~~~vlEAma~G 379 (388)
.++.+++.|- +.+..+.+.++++++|. .+...++ ..+.=+|..+..+ .-....+.|++.|
T Consensus 3 ~~~~~~~sg~-----~~~~~~~l~~~~~~~G~----~~~~~~~--------~~~THli~~~~~~~~~~rt~k~~~a~~~g 65 (214)
T 1t15_A 3 KRMSMVVSGL-----TPEEFMLVYKFARKHHI----TLTNLIT--------EETTHVVMKTDAEFVCERTLKYFLGIAGG 65 (214)
T ss_dssp -CCEEEEESC-----CHHHHHHHHHHHHHHTC----EECSSCC--------TTCCEEEECBCTTSEECCBHHHHHHHHTT
T ss_pred CcEEEEECCC-----CHHHHHHHHHHHHHhCC----EEeCccC--------CCCcEEEEeCCcccchhhhHHHHHHHhcC
Confidence 4677888775 44456678888888864 3333332 3455455554322 2356789999999
Q ss_pred CceEeeCC
Q 016535 380 AIPIGKHF 387 (388)
Q Consensus 380 ~PVI~~~~ 387 (388)
++||.++|
T Consensus 66 ~~IV~~~W 73 (214)
T 1t15_A 66 KWVVSYFW 73 (214)
T ss_dssp CEEEETHH
T ss_pred CEEeCHHH
Confidence 99998653
No 213
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=28.24 E-value=60 Score=24.27 Aligned_cols=25 Identities=8% Similarity=0.076 Sum_probs=20.1
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEe
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYT 74 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~ 74 (388)
|-.++++..+++.|.+.| +++.++.
T Consensus 12 Gnt~~~a~~i~~~l~~~g--~~v~~~~ 36 (147)
T 1f4p_A 12 GNTEYTAETIARELADAG--YEVDSRD 36 (147)
T ss_dssp SHHHHHHHHHHHHHHHHT--CEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcC--CeeEEEe
Confidence 578889999999999999 6665543
No 214
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=28.13 E-value=59 Score=28.53 Aligned_cols=12 Identities=8% Similarity=-0.106 Sum_probs=6.2
Q ss_pred HHHhCCceEeeC
Q 016535 375 YMAAGAIPIGKH 386 (388)
Q Consensus 375 Ama~G~PVI~~~ 386 (388)
+...|.|||+.|
T Consensus 82 ~~~~giPvV~~~ 93 (350)
T 3h75_A 82 SQGSGIKLFIVN 93 (350)
T ss_dssp HTTSCCEEEEEE
T ss_pred HHhCCCcEEEEc
Confidence 334566665544
No 215
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=28.12 E-value=1.5e+02 Score=27.04 Aligned_cols=43 Identities=14% Similarity=0.079 Sum_probs=33.8
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
+.++|+++..+....|-+.+++..++.++.+.| .+|++.++..
T Consensus 187 ~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG--~~v~l~~P~~ 229 (418)
T 2yfk_A 187 KGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLG--MDVVLAHPEG 229 (418)
T ss_dssp TTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGT--CEEEEECCTT
T ss_pred CCCEEEEEeccccccCccchHHHHHHHHHHHcC--CEEEEECCcc
Confidence 578999986544443355789999999999999 8999988865
No 216
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=28.09 E-value=68 Score=24.19 Aligned_cols=25 Identities=4% Similarity=0.021 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 50 GERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 50 ~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
++++-..+++.|.+.| ++|+++..+
T Consensus 11 ~G~vG~~la~~L~~~g--~~V~vid~~ 35 (153)
T 1id1_A 11 HSILAINTILQLNQRG--QNVTVISNL 35 (153)
T ss_dssp CSHHHHHHHHHHHHTT--CCEEEEECC
T ss_pred CCHHHHHHHHHHHHCC--CCEEEEECC
Confidence 4677788999999999 788887754
No 217
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=27.95 E-value=1.2e+02 Score=27.01 Aligned_cols=83 Identities=13% Similarity=0.109 Sum_probs=44.9
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc-CC-CHHHHHHHHHh---CcEEEEcCCCC-CCChHHHHHH
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK-NL-LYRDLVKLLGG---AVVGIHSMIDE-HFGISVVEYM 376 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g-~v-~~~~l~~~~~~---adv~v~ps~~E-~~~~~vlEAm 376 (388)
|+-++++.|-|-+---.... .....+++.++. |..++- ++ -..-+..++.. .|.|+.|...- -.|....|-+
T Consensus 138 P~k~VVFfaiGFETTaP~tA-~~i~~a~~~~l~-Nfsvl~~h~l~pPa~~all~~~~~idgfi~PGHVstIiG~~~y~~l 215 (372)
T 2z1d_A 138 PDKTVVHFSPGFETTTAPAA-GMLNVAAQEELE-NFKIYSVHRLTPPAVEVLLKQGTVFQGLIAPGHVSTIIGVKGWEYL 215 (372)
T ss_dssp TTSEEEEEEEECHHHHHHHH-HHHHHHHHHTCS-SEEEEEEEECHHHHHHHHHHTSCCCSEEEEEHHHHHHHTTHHHHHH
T ss_pred CCCeEEEEeeChhhccHHHH-HHHHHHHHcCCC-CEEEEEeccccHHHHHHHHcCCCcCcEEEecCeeeEEeccchhHHH
Confidence 56556665554222111122 222334444554 665542 22 23556666664 68999996543 3566666655
Q ss_pred --HhCCceEeeCC
Q 016535 377 --AAGAIPIGKHF 387 (388)
Q Consensus 377 --a~G~PVI~~~~ 387 (388)
-+|+|++.+.+
T Consensus 216 ~~~y~~P~VVaGF 228 (372)
T 2z1d_A 216 TEKYGIPQVVAGF 228 (372)
T ss_dssp HHHHCCCEEEECS
T ss_pred HHHcCCCEEEcCC
Confidence 57899998765
No 218
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=27.91 E-value=1.1e+02 Score=26.91 Aligned_cols=68 Identities=10% Similarity=-0.085 Sum_probs=41.5
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++.+ ..+ +++.+++. ..|+++..+....-.-.+.+|+.+|+
T Consensus 43 ~~~~lvav~d~----~~~---~~~~~a~~~~~~---~~~-----~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGk 107 (340)
T 1zh8_A 43 HLFEITAVTSR----TRS---HAEEFAKMVGNP---AVF-----DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGV 107 (340)
T ss_dssp TTEEEEEEECS----SHH---HHHHHHHHHSSC---EEE-----SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTC
T ss_pred CceEEEEEEcC----CHH---HHHHHHHHhCCC---ccc-----CCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCC
Confidence 46777655543 332 455666666642 222 34556666 47877776644332334678999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 108 hVl~E 112 (340)
T 1zh8_A 108 HVICE 112 (340)
T ss_dssp EEEEE
T ss_pred cEEEe
Confidence 99874
No 219
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=27.88 E-value=1.5e+02 Score=23.25 Aligned_cols=26 Identities=23% Similarity=0.240 Sum_probs=14.9
Q ss_pred EEEEcCCCCCCChHHHHHHH-hCCceE
Q 016535 358 VGIHSMIDEHFGISVVEYMA-AGAIPI 383 (388)
Q Consensus 358 v~v~ps~~E~~~~~vlEAma-~G~PVI 383 (388)
+++.|--+-..+..+..|++ .+.|+|
T Consensus 82 IIINpgAyTHtSvAlrDAl~~v~~P~V 108 (176)
T 2c4w_A 82 IIINPGAFSHTSIAIADAIMLAGKPVI 108 (176)
T ss_dssp EEEECGGGGGTCHHHHHHHHTSSSCEE
T ss_pred EEECcchhccchHHHHHHHHhCCCCEE
Confidence 44556666666666666653 345554
No 220
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=27.82 E-value=2.7e+02 Score=23.34 Aligned_cols=100 Identities=11% Similarity=0.034 Sum_probs=57.6
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc-cCCCHHHHHHH--HHhCcE
Q 016535 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY-KNLLYRDLVKL--LGGAVV 358 (388)
Q Consensus 282 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~-g~v~~~~l~~~--~~~adv 358 (388)
..-+.+++.+..+.++.. -.+.++.+.. +.+..+..+++.+.+++.+++-..... +.-+.+.+.+. -..+|+
T Consensus 18 ~~s~~al~~A~~la~~~~---a~l~ll~v~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dl 92 (290)
T 3mt0_A 18 QLEGLALKRAQLIAGVTQ---SHLHLLVCEK--RRDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGL 92 (290)
T ss_dssp CSCCHHHHHHHHHHHHHC---CEEEEEEECS--SSCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSE
T ss_pred ccchHHHHHHHHHHHhcC---CeEEEEEeeC--cHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCE
Confidence 344556665666666541 2344444443 244556677777777777776444443 44456777777 567999
Q ss_pred EEEcCCCCC------CChHHHH-HHHhCCceEeeC
Q 016535 359 GIHSMIDEH------FGISVVE-YMAAGAIPIGKH 386 (388)
Q Consensus 359 ~v~ps~~E~------~~~~vlE-Ama~G~PVI~~~ 386 (388)
+|..+...+ +|-+.-+ ...+++||+...
T Consensus 93 iV~G~~~~~~~~~~~~gs~~~~vl~~~~~PVlvv~ 127 (290)
T 3mt0_A 93 IIKQHFPDNPLKKAILTPDDWKLLRFAPCPVLMTK 127 (290)
T ss_dssp EEEECCCSCTTSTTSCCHHHHHHHHHCSSCEEEEC
T ss_pred EEEecccCCchhhcccCHHHHHHHhcCCCCEEEec
Confidence 998765332 3333222 235788887653
No 221
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=27.65 E-value=2.1e+02 Score=22.11 Aligned_cols=72 Identities=11% Similarity=-0.040 Sum_probs=40.9
Q ss_pred EEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHH---HHHHhCcEEEEcCCCCCCChHH----HHHHHh
Q 016535 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLV---KLLGGAVVGIHSMIDEHFGISV----VEYMAA 378 (388)
Q Consensus 306 ~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~---~~~~~adv~v~ps~~E~~~~~v----lEAma~ 378 (388)
++.++|.|. +......+.......|.+ +.....-+ .++. ..+..-|+++.-|.. |...-+ -.|-..
T Consensus 41 ~I~i~G~G~---S~~~a~~~~~~l~~~g~~--~~~~~~~~-~~~~~~~~~~~~~d~~i~iS~s-G~t~~~~~~~~~ak~~ 113 (187)
T 3sho_A 41 HVIVVGMGF---SAAVAVFLGHGLNSLGIR--TTVLTEGG-STLTITLANLRPTDLMIGVSVW-RYLRDTVAALAGAAER 113 (187)
T ss_dssp EEEEECCGG---GHHHHHHHHHHHHHTTCC--EEEECCCT-HHHHHHHHTCCTTEEEEEECCS-SCCHHHHHHHHHHHHT
T ss_pred EEEEEecCc---hHHHHHHHHHHHHhcCCC--EEEecCCc-hhHHHHHhcCCCCCEEEEEeCC-CCCHHHHHHHHHHHHC
Confidence 888899875 333445556666666654 66665211 3332 334456777776653 222233 345567
Q ss_pred CCceEe
Q 016535 379 GAIPIG 384 (388)
Q Consensus 379 G~PVI~ 384 (388)
|.++|+
T Consensus 114 g~~vi~ 119 (187)
T 3sho_A 114 GVPTMA 119 (187)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 888876
No 222
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=27.65 E-value=1.6e+02 Score=25.12 Aligned_cols=23 Identities=4% Similarity=-0.143 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeC
Q 016535 285 PLQLEAFSVALRKLDADLPRPRLQFVGS 312 (388)
Q Consensus 285 ~~ll~a~~~l~~~~~~~~~~~~l~ivG~ 312 (388)
..+++.+....++. ++.+.+...
T Consensus 19 ~~~~~gi~~~a~~~-----g~~~~~~~~ 41 (330)
T 3uug_A 19 IDDGNNIVKQLQEA-----GYKTDLQYA 41 (330)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEEEEC
T ss_pred HHHHHHHHHHHHHc-----CCEEEEeeC
Confidence 34445555554442 556655553
No 223
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=27.64 E-value=51 Score=27.83 Aligned_cols=47 Identities=9% Similarity=0.097 Sum_probs=28.9
Q ss_pred hhcccCccceEEEecc-ccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 27 HNARRNRTTSVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 27 ~~~~~~~~~~I~~~~p-~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+..++++..+|+++.| ..... -...++..+.+++.+.| +++.++...
T Consensus 4 R~L~~~~~~~Igvi~~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 51 (289)
T 3g85_A 4 RSKNSQSKPTIALYWSSDISVN-IISRFLRGLQSKLAKQN--YNYNVVICP 51 (289)
T ss_dssp -------CCEEEEEEETTSCGG-GHHHHHHHHHHHHHHTT--TCSEEEEEE
T ss_pred hhcccCCCceEEEEeccccchH-HHHHHHHHHHHHHHHcC--CeEEEEecC
Confidence 5567788899999998 55433 45667777888899999 666555433
No 224
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=27.61 E-value=1.3e+02 Score=24.88 Aligned_cols=68 Identities=9% Similarity=-0.114 Sum_probs=44.7
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCce
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP 382 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PV 382 (388)
...++.+-|- +.+..+++.+.++++|.. +.--..+ =..+.=+|.+... -....+.|+++|++|
T Consensus 8 ~~~~~~~Sg~-----~~~~~~~l~~~i~~LGg~--~~~~~~~--------~~~~THlV~~~~~--RT~K~l~aia~G~wI 70 (235)
T 3al2_A 8 KQYIFQLSSL-----NPQERIDYCHLIEKLGGL--VIEKQCF--------DPTCTHIVVGHPL--RNEKYLASVAAGKWV 70 (235)
T ss_dssp CCCEEEEESC-----CHHHHHHHHHHHHHTTCE--ECCSSSC--------CTTCCEEEESSCC--CSHHHHHHHHTTCEE
T ss_pred CCEEEEEcCC-----CHHHHHHHHHHHHHcCCE--EeccCCC--------CCCCcEEEECCCC--CCHHHHHHHHcCCcC
Confidence 3677777774 444556789999998743 2100111 1456667777532 277899999999999
Q ss_pred EeeCC
Q 016535 383 IGKHF 387 (388)
Q Consensus 383 I~~~~ 387 (388)
|.+++
T Consensus 71 vs~~w 75 (235)
T 3al2_A 71 LHRSY 75 (235)
T ss_dssp ECTHH
T ss_pred ccHHH
Confidence 98753
No 225
>3dsa_A D-ribose high-affinity transport system; D-ribose transport system, RBSD, decamer, csgid, transport protein, structural genomics; 2.45A {Salmonella typhimurium} PDB: 3e7n_A
Probab=27.53 E-value=1.1e+02 Score=23.23 Aligned_cols=85 Identities=9% Similarity=0.087 Sum_probs=53.7
Q ss_pred CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHh----cCCCCcEEEccCCCHHHHHHHHHhC
Q 016535 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE----LKVDGNVEFYKNLLYRDLVKLLGGA 356 (388)
Q Consensus 281 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~----~~l~~~V~~~g~v~~~~l~~~~~~a 356 (388)
..|+..++++++.+.+.. .+.=.++.......+.+..+++++...+ .+-. +. ..++++++..+.-++|
T Consensus 48 ~~gvP~~~~vl~aIl~~~-----~ve~~v~a~e~~~~~p~i~~~~~~~l~~~~~~~~~~--~~-i~~i~h~~Fy~~~k~a 119 (142)
T 3dsa_A 48 TQGVPSFMQVVDVVTREM-----QVEAAILATEIKQQNPQLHETLLTHLEQLQQHQGNT--IK-ISYTTHEQFKKLTADS 119 (142)
T ss_dssp BTTBSCHHHHHHHHHHHS-----CEEEEEEETTHHHHCHHHHHHHHHHHHHHHHHHTSC--CE-EEEECHHHHHHHGGGS
T ss_pred CCCCccHHHHHHHHHHhh-----ccchhhhhhhccccCHHHHHHHHHHHHHhhhhcCCC--cc-eEEcCHHHHHHHHhcC
Confidence 478888888888777764 3443333332111234455566665542 2322 22 3556789999999999
Q ss_pred cEEEEcCCCCCCChHHH
Q 016535 357 VVGIHSMIDEHFGISVV 373 (388)
Q Consensus 357 dv~v~ps~~E~~~~~vl 373 (388)
.++|.+...-.|+..++
T Consensus 120 ~aVVrTGE~~pYaNiIL 136 (142)
T 3dsa_A 120 QAVIRSGECSPYANVIL 136 (142)
T ss_dssp SEEEECCCCSTTCCEEE
T ss_pred eEEEECCCCCccceEEE
Confidence 99999987777877653
No 226
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=27.48 E-value=91 Score=27.08 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=30.4
Q ss_pred cEEEccCCCHHHHHHHH-------HhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 337 NVEFYKNLLYRDLVKLL-------GGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 337 ~V~~~g~v~~~~l~~~~-------~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.+.++.. .+++.+++ ...|+++.++....-.-.+.+|+.+|++|++-
T Consensus 49 ~~~~~~~--~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~E 102 (312)
T 3o9z_A 49 EAEFFTE--PEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALSE 102 (312)
T ss_dssp TCEEESC--HHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCceeCC--HHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCCCeEEEE
Confidence 3455443 36666543 45787777665543344578999999999974
No 227
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=27.38 E-value=60 Score=20.07 Aligned_cols=16 Identities=44% Similarity=0.852 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 016535 7 LIWAVITAVLASILIL 22 (388)
Q Consensus 7 ~~~~~~~~~~~~~~~~ 22 (388)
-+|-++++++..+|+|
T Consensus 11 p~wiIi~svl~GLllL 26 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLL 26 (54)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH
Confidence 3443444444444333
No 228
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=27.37 E-value=77 Score=25.32 Aligned_cols=27 Identities=7% Similarity=0.070 Sum_probs=20.8
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
||...+=..+++.|.++| ++|+++...
T Consensus 7 GatG~iG~~l~~~L~~~g--~~V~~~~R~ 33 (221)
T 3ew7_A 7 GATGRAGSRILEEAKNRG--HEVTAIVRN 33 (221)
T ss_dssp TTTSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred cCCchhHHHHHHHHHhCC--CEEEEEEcC
Confidence 566666678889999999 888887754
No 229
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=27.33 E-value=2.1e+02 Score=24.90 Aligned_cols=68 Identities=12% Similarity=-0.027 Sum_probs=39.4
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+.+.. ..++.+++++. +.. ..++.+++. ..|+++..+....-.-.+.+|+.+|+
T Consensus 27 ~~~~lvav~d~~~~-------~~~~~a~~~~~---~~~-----~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk 91 (336)
T 2p2s_A 27 AGAELAGVFESDSD-------NRAKFTSLFPS---VPF-----AASAEQLITDASIDLIACAVIPCDRAELALRTLDAGK 91 (336)
T ss_dssp TTCEEEEEECSCTT-------SCHHHHHHSTT---CCB-----CSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEeCCCHH-------HHHHHHHhcCC---Ccc-----cCCHHHHhhCCCCCEEEEeCChhhHHHHHHHHHHCCC
Confidence 47887655543222 23455555532 111 145566676 58877776544332334678999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 92 hVl~E 96 (336)
T 2p2s_A 92 DFFTA 96 (336)
T ss_dssp EEEEC
T ss_pred cEEEe
Confidence 99874
No 230
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=27.32 E-value=1.8e+02 Score=25.48 Aligned_cols=48 Identities=17% Similarity=0.190 Sum_probs=35.7
Q ss_pred ccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHH
Q 016535 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLA 86 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~ 86 (388)
.+=+.++|+|+ |.+.+++..++.++.+.| .++++.++....+++.+.+
T Consensus 151 g~l~gl~va~v-------GD~~rva~Sl~~~~~~~g--~~v~~~~P~~~~~~~~~~~ 198 (315)
T 1pvv_A 151 GTIKGVKVVYV-------GDGNNVAHSLMIAGTKLG--ADVVVATPEGYEPDEKVIK 198 (315)
T ss_dssp SCCTTCEEEEE-------SCCCHHHHHHHHHHHHTT--CEEEEECCTTCCCCHHHHH
T ss_pred CCcCCcEEEEE-------CCCcchHHHHHHHHHHCC--CEEEEECCccccCCHHHHH
Confidence 34467899997 334789999999999999 8999988876444444443
No 231
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=27.30 E-value=1.2e+02 Score=21.27 Aligned_cols=68 Identities=9% Similarity=0.024 Sum_probs=42.9
Q ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCc
Q 016535 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381 (388)
Q Consensus 302 ~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~P 381 (388)
+.++.+++.|..+ ....+++++++++|- . +...++ ..++-+|.......-+..+..|...|+|
T Consensus 16 l~g~~i~isg~~~-----~~r~~l~~li~~~Gg--~--v~~~~s--------~~~THlI~~~~~~~~~~K~~~A~~~gi~ 78 (107)
T 3l3e_A 16 LHKVVVCVSKKLS-----KKQSELNGIAASLGA--D--YRRSFD--------ETVTHFIYQGRPNDTNREYKSVKERGVH 78 (107)
T ss_dssp TTTCEEEECGGGG-----GGHHHHHHHHHHTTC--E--EESSCC--------TTCCEEECCCCTTCCCHHHHHHHHTTCE
T ss_pred CCCeEEEEeCCCh-----HhHHHHHHHHHHcCC--E--Eecccc--------CCceEEEecCCCCCCCHHHHHHHHCCCe
Confidence 3578888888643 224578888888763 2 334443 3455555533233446778888889999
Q ss_pred eEeeC
Q 016535 382 PIGKH 386 (388)
Q Consensus 382 VI~~~ 386 (388)
||..+
T Consensus 79 IV~~~ 83 (107)
T 3l3e_A 79 IVSEH 83 (107)
T ss_dssp EECHH
T ss_pred EecHH
Confidence 98754
No 232
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=27.19 E-value=20 Score=31.59 Aligned_cols=38 Identities=13% Similarity=-0.170 Sum_probs=25.1
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+.+++..+|+++..+....---.+.+++.+|++||++.
T Consensus 52 ~~~ll~~~DvViiatp~~~h~~~~~~al~aG~~Vv~ek 89 (320)
T 1f06_A 52 VDKHADDVDVLFLCMGSATDIPEQAPKFAQFACTVDTY 89 (320)
T ss_dssp GGGTTTTCSEEEECSCTTTHHHHHHHHHTTTSEEECCC
T ss_pred HHHHhcCCCEEEEcCCcHHHHHHHHHHHHCCCEEEECC
Confidence 33444789988877644322223568888999999865
No 233
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=26.92 E-value=81 Score=23.62 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=24.4
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEE
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVY 73 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~ 73 (388)
+|+++ |....|..++++..+++.|.+.| +++.++
T Consensus 3 ki~I~--Y~S~tGnT~~~A~~ia~~l~~~g--~~v~~~ 36 (147)
T 2hna_A 3 DITLI--SGSTLGGAEYVAEHLAEKLEEAG--FTTETL 36 (147)
T ss_dssp SEEEE--CCTTSCCCHHHHHHHHHHHHHTT--CCEEEE
T ss_pred eEEEE--EECCchHHHHHHHHHHHHHHHCC--CceEEe
Confidence 34444 33444699999999999999999 555554
No 234
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=26.85 E-value=2.1e+02 Score=24.43 Aligned_cols=33 Identities=12% Similarity=-0.010 Sum_probs=16.9
Q ss_pred hCcEEEE-cCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 355 GAVVGIH-SMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 355 ~adv~v~-ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.+|.++. |...+...-.+-++...|.|||+.|+
T Consensus 60 ~vdgiii~~~~~~~~~~~~~~a~~~gipvV~~d~ 93 (316)
T 1tjy_A 60 GYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDS 93 (316)
T ss_dssp TCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESS
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHCcCEEEEecC
Confidence 3565444 33233222334455667777777653
No 235
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=26.60 E-value=2.3e+02 Score=25.05 Aligned_cols=51 Identities=16% Similarity=0.172 Sum_probs=37.3
Q ss_pred cccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHh
Q 016535 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARA 88 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~ 88 (388)
+.+=+.++|+|+ |.+.+++..++.++.+.| .++.+.++....+++.+.+..
T Consensus 174 ~G~l~glkva~v-------GD~~nva~Sl~~~~~~~G--~~v~~~~P~~~~~~~~~~~~~ 224 (340)
T 4ep1_A 174 TNTFKGIKLAYV-------GDGNNVCHSLLLASAKVG--MHMTVATPVGYRPNEEIVKKA 224 (340)
T ss_dssp HSCCTTCEEEEE-------SCCCHHHHHHHHHHHHHT--CEEEEECCTTCCCCHHHHHHH
T ss_pred hCCCCCCEEEEE-------CCCchhHHHHHHHHHHcC--CEEEEECCcccCCCHHHHHHH
Confidence 334578999998 344788899999999999 899998887644445444433
No 236
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=26.56 E-value=2.4e+02 Score=25.63 Aligned_cols=80 Identities=6% Similarity=-0.067 Sum_probs=50.7
Q ss_pred CcEEEEEcccCCC--CCh---HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 269 YPAIISVAQFRPE--KAH---PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 269 ~~~il~vgrl~~~--Kg~---~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
...+.++|-+... .+. ..++.++..+ .+.+.+++......+.+..+..++.+++.|. .+.+.
T Consensus 191 Glkva~vgd~~~~~G~~nnVa~Sli~~~~~l---------G~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~--~i~~~-- 257 (399)
T 3q98_A 191 GKKIAMTWAYSPSYGKPLSVPQGIIGLMTRF---------GMDVTLAHPEGYDLIPDVVEVAKNNAKASGG--SFRQV-- 257 (399)
T ss_dssp TCEEEEECCCCSSCCCCTHHHHHHHHHHGGG---------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTC--EEEEE--
T ss_pred CCEEEEEEecccccCcchHHHHHHHHHHHHc---------CCEEEEECCcccCCCHHHHHHHHHHHHHcCC--EEEEE--
Confidence 3568888765432 222 5566666655 7899999965333355566666666777663 24433
Q ss_pred CCHHHHHHHHHhCcEEEEcCC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~ 364 (388)
+++.+.++.||++....|
T Consensus 258 ---~d~~eav~~aDvVytd~W 275 (399)
T 3q98_A 258 ---TSMEEAFKDADIVYPKSW 275 (399)
T ss_dssp ---SCHHHHHTTCSEEEECCC
T ss_pred ---cCHHHHhCCCCEEEecCc
Confidence 456678999998776654
No 237
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=26.45 E-value=2e+02 Score=25.57 Aligned_cols=78 Identities=13% Similarity=0.015 Sum_probs=45.0
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHH--hcCCCCcEEEccCCC
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI--ELKVDGNVEFYKNLL 345 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~--~~~l~~~V~~~g~v~ 345 (388)
+...+.++|-+. + ....+..+..+. .+.+.+++......+.+..+..++.++ +.+ ..+...
T Consensus 187 ~glkva~vGD~~---n---va~Sl~~~l~~l-----G~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g--~~~~~~---- 249 (353)
T 3sds_A 187 EGLKIAWVGDAN---N---VLFDLAIAATKM-----GVNVAVATPRGYEIPSHIVELIQKAREGVQSP--GNLTQT---- 249 (353)
T ss_dssp TTCEEEEESCCC---H---HHHHHHHHHHHT-----TCEEEEECCTTCCCCHHHHHHHHHHHTTCSSC--CCEEEE----
T ss_pred CCCEEEEECCCc---h---HHHHHHHHHHHc-----CCEEEEECCcccCCCHHHHHHHHHhhhhccCC--CeEEEE----
Confidence 457899999762 2 333333333442 789999997544334443444444333 222 234433
Q ss_pred HHHHHHHHHhCcEEEEcC
Q 016535 346 YRDLVKLLGGAVVGIHSM 363 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps 363 (388)
+++.+.++.||++....
T Consensus 250 -~d~~eav~~aDVvytd~ 266 (353)
T 3sds_A 250 -TVPEVAVKDADVIVTDT 266 (353)
T ss_dssp -SCHHHHTTTCSEEEECC
T ss_pred -CCHHHHhcCCCEEEeCC
Confidence 35677899999887654
No 238
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=26.38 E-value=20 Score=30.88 Aligned_cols=39 Identities=13% Similarity=-0.203 Sum_probs=25.9
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
++.+++..+|+++-.+..+..--.+..|+.+|+|+|+..
T Consensus 65 dl~~~l~~~DvVIDft~p~~~~~~~~~a~~~G~~vVigT 103 (273)
T 1dih_A 65 SLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGT 103 (273)
T ss_dssp CSTTTTTSCSEEEECSCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CHHHHhcCCCEEEEcCChHHHHHHHHHHHhCCCCEEEEC
Confidence 345566788999855554433334567888999988744
No 239
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=26.35 E-value=2e+02 Score=25.63 Aligned_cols=65 Identities=14% Similarity=-0.073 Sum_probs=44.1
Q ss_pred cHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh-CcEEEEcCCCCCCChHHHHHHH-hCCceEeeC
Q 016535 318 DEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG-AVVGIHSMIDEHFGISVVEYMA-AGAIPIGKH 386 (388)
Q Consensus 318 ~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~-adv~v~ps~~E~~~~~vlEAma-~G~PVI~~~ 386 (388)
..+....|.+.+++.|++ .+....+.+.+.-+-.- +|++=.+|. |-....++++.+ .|+|||-+.
T Consensus 89 ~~e~~~~L~~~~~~~Gi~---~~st~~d~~svd~l~~~~v~~~KI~S~-~~~n~~LL~~va~~gkPviLst 155 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKGMI---FISTLFSRAAALRLQRMDIPAYKIGSG-ECNNYPLIKLVASFGKPIILST 155 (349)
T ss_dssp CHHHHHHHHHHHHHTTCE---EEEEECSHHHHHHHHHHTCSCEEECGG-GTTCHHHHHHHHTTCSCEEEEC
T ss_pred CHHHHHHHHHHHHHhCCe---EEEeeCCHHHHHHHHhcCCCEEEECcc-cccCHHHHHHHHhcCCeEEEEC
Confidence 446678899999998875 44444555665555443 687777764 345667787665 799999764
No 240
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=26.21 E-value=1.4e+02 Score=26.15 Aligned_cols=68 Identities=15% Similarity=0.057 Sum_probs=41.1
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++.+-+. +.+ ..++.+++++.+ ... +++.+++. .+|+++..+....-.-.+.+|+.+|+
T Consensus 32 ~~~~~vav~d~----~~~---~~~~~a~~~g~~---~~~-----~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~G~ 96 (346)
T 3cea_A 32 QGVKLVAACAL----DSN---QLEWAKNELGVE---TTY-----TNYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGL 96 (346)
T ss_dssp SSEEEEEEECS----CHH---HHHHHHHTTCCS---EEE-----SCHHHHHTTSCCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCcEEEEEecC----CHH---HHHHHHHHhCCC---ccc-----CCHHHHhcCCCCCEEEEeCChHhHHHHHHHHHHCCC
Confidence 57777655543 332 455566666543 111 24455665 58988877654433344678999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 97 ~v~~e 101 (346)
T 3cea_A 97 NVFCE 101 (346)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99874
No 241
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=26.16 E-value=70 Score=27.77 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=25.8
Q ss_pred HHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 348 DLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+..+++. .+|+++..+....-.-.+.+|+.+|++|++-
T Consensus 60 ~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~e 99 (315)
T 3c1a_A 60 DWRSVVSAPEVEAVIIATPPATHAEITLAAIASGKAVLVE 99 (315)
T ss_dssp STHHHHTCTTCCEEEEESCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEc
Confidence 3445664 6897777665443344567889999999875
No 242
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=26.06 E-value=1e+02 Score=26.78 Aligned_cols=46 Identities=7% Similarity=0.028 Sum_probs=30.8
Q ss_pred cccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
.++++...|+++.|..... --..++..+-+++.+.| +++.+.....
T Consensus 57 l~~~~~~~Igvi~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~~ 102 (339)
T 3h5o_A 57 LASAKSRTVLVLIPSLANT-VFLETLTGIETVLDAAG--YQMLIGNSHY 102 (339)
T ss_dssp ------CEEEEEESCSTTC-TTHHHHHHHHHHHHHTT--CEEEEEECTT
T ss_pred hhcCCCCEEEEEeCCCCCH-HHHHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 3456677899999987655 56677778888999999 7777766543
No 243
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=26.02 E-value=82 Score=27.08 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=24.1
Q ss_pred cCccceEEEe--ccccCCCCChhhHHHHHHHHHhhcCCCceEEEE
Q 016535 31 RNRTTSVAFF--HPNTNDGGGGERVLWCAVKAIQEESPDLDCIVY 73 (388)
Q Consensus 31 ~~~~~~I~~~--~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~ 73 (388)
..+.|||+++ ||.. .+=...++..+++.|.+.| ++|.+.
T Consensus 19 ~m~~MKiLII~aHP~~--~S~n~aL~~~~~~~l~~~G--~eV~v~ 59 (280)
T 4gi5_A 19 YFQSMKVLLIYAHPEP--RSLNGALKNFAIRHLQQAG--HEVQVS 59 (280)
T ss_dssp ---CCEEEEEECCSCT--TSHHHHHHHHHHHHHHHTT--CEEEEE
T ss_pred hhhCCeEEEEEeCCCC--ccHHHHHHHHHHHHHHHCC--CeEEEE
Confidence 4567887766 6764 2123445566889999999 666665
No 244
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=26.00 E-value=2.8e+02 Score=22.86 Aligned_cols=55 Identities=9% Similarity=-0.087 Sum_probs=31.2
Q ss_pred HHHHHHHhcCCCCcEEEccCC---C----HHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 324 SLKDKSIELKVDGNVEFYKNL---L----YRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 324 ~l~~~~~~~~l~~~V~~~g~v---~----~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
...+.+++++++ +...... + ++++.+.++ +.|++|+..+..-.+-.++++...|+
T Consensus 63 ~~~~~A~~~gIp--~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~ 126 (229)
T 3auf_A 63 YGLERARRAGVD--ALHMDPAAYPSRTAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRI 126 (229)
T ss_dssp HHHHHHHHTTCE--EEECCGGGSSSHHHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCE
T ss_pred HHHHHHHHcCCC--EEEECcccccchhhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCE
Confidence 346677777776 4432221 1 245555555 35777777666666666666655443
No 245
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=25.77 E-value=57 Score=29.06 Aligned_cols=69 Identities=9% Similarity=-0.086 Sum_probs=40.1
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC--cEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA--VVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a--dv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++.. ..+ +++.+++... |+++..+....-.-.+.+|+.+|+
T Consensus 29 ~~~~l~av~d~----~~~---~~~~~a~~~~~~---~~~-----~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGk 93 (359)
T 3m2t_A 29 QDIRIVAACDS----DLE---RARRVHRFISDI---PVL-----DNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGV 93 (359)
T ss_dssp TTEEEEEEECS----SHH---HHGGGGGTSCSC---CEE-----SSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEEcC----CHH---HHHHHHHhcCCC---ccc-----CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCC
Confidence 67887755432 322 444555554321 111 4556667654 877776544333334679999999
Q ss_pred ceEeeC
Q 016535 381 IPIGKH 386 (388)
Q Consensus 381 PVI~~~ 386 (388)
+|++-.
T Consensus 94 hVl~EK 99 (359)
T 3m2t_A 94 NVFVEK 99 (359)
T ss_dssp EEEECS
T ss_pred eEEEEC
Confidence 999743
No 246
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=25.72 E-value=2.8e+02 Score=22.83 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=23.5
Q ss_pred CccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 32 ~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
.+.|||+|+.- |....+..+.++|.+....+++..+.+.
T Consensus 20 ~~~~rI~~l~S------G~g~~~~~~l~~l~~~~~~~~I~~Vvt~ 58 (229)
T 3auf_A 20 GHMIRIGVLIS------GSGTNLQAILDGCREGRIPGRVAVVISD 58 (229)
T ss_dssp TTCEEEEEEES------SCCHHHHHHHHHHHTTSSSEEEEEEEES
T ss_pred CCCcEEEEEEe------CCcHHHHHHHHHHHhCCCCCeEEEEEcC
Confidence 45578988832 3335677788888776323666544333
No 247
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=25.64 E-value=2.7e+02 Score=22.63 Aligned_cols=55 Identities=7% Similarity=-0.046 Sum_probs=29.4
Q ss_pred HHHHHHHhcCCCCcEEEccCC---C----HHHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 324 SLKDKSIELKVDGNVEFYKNL---L----YRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 324 ~l~~~~~~~~l~~~V~~~g~v---~----~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
...+.++++|++ +...... + ++++.+.+++ .|++|+..+..-.+-.++++...|+
T Consensus 43 ~v~~~A~~~gIp--~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~~~~~ 106 (211)
T 3p9x_A 43 KVVERVKVHEIP--VCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRI 106 (211)
T ss_dssp HHHHHHHTTTCC--EEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHHTTSE
T ss_pred HHHHHHHHcCCC--EEEeChhhcCchhhhHHHHHHHHHhcCCCEEEEeCchhhcCHHHHhhccCCe
Confidence 455666677766 3332221 1 2344555543 5666666665666666666655543
No 248
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=25.60 E-value=54 Score=27.00 Aligned_cols=64 Identities=14% Similarity=0.106 Sum_probs=42.5
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceE
Q 016535 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI 383 (388)
.+++.+-|- +....+++.+.++++|-. + .. + ...+.-+|.+... -....+.|++.|+|||
T Consensus 16 ~~~i~~SG~-----~~~~~~~l~~~i~~lGg~--v--~~-----~----~~~~THLI~~~~~--rT~K~l~A~~~g~~IV 75 (219)
T 3sqd_A 16 TPFVLFTGF-----EPVQVQQYIKKLYILGGE--V--AE-----S----AQKCTHLIASKVT--RTVKFLTAISVVKHIV 75 (219)
T ss_dssp CCEEEECSC-----CHHHHHHHHHHHHHTTCE--E--CS-----S----GGGCSEEECSSCC--CCHHHHHHTTTCSEEE
T ss_pred CeEEEEeCC-----ChHHHHHHHHHHHHCCCE--E--eC-----C----CCCceEEEECCCC--CCHHHHHHHHcCCCEe
Confidence 567777774 333456788888888743 2 21 1 1567777776521 2357899999999999
Q ss_pred eeCC
Q 016535 384 GKHF 387 (388)
Q Consensus 384 ~~~~ 387 (388)
.++|
T Consensus 76 s~~W 79 (219)
T 3sqd_A 76 TPEW 79 (219)
T ss_dssp CHHH
T ss_pred cHHH
Confidence 8753
No 249
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=25.59 E-value=1.7e+02 Score=23.99 Aligned_cols=47 Identities=13% Similarity=0.150 Sum_probs=29.5
Q ss_pred HHHhhcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 24 SHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 24 ~~~~~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
.+.++..++ +++|.++ |....|-++.++..+++.| +.| +.+.++.-+
T Consensus 31 ~l~~~~~~~-~~kv~Il--YgS~tGnte~~A~~La~~l-~~g--~~v~v~~l~ 77 (219)
T 3hr4_A 31 MLMRKTMAS-RVRVTIL--FATETGKSEALAWDLGALF-SCA--FNPKVVCMD 77 (219)
T ss_dssp HHHHHHHHT-SCEEEEE--EECSSSHHHHHHHHHHHHH-TTT--SEEEEEEGG
T ss_pred HHHHHHHhc-CCcEEEE--EECCchHHHHHHHHHHHHH-HcC--CCeEEEEcc
Confidence 334444444 3444444 3444579999999999988 567 666666543
No 250
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=25.40 E-value=83 Score=25.24 Aligned_cols=27 Identities=15% Similarity=0.165 Sum_probs=20.8
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
||...+=..+++.|.++| ++|+++...
T Consensus 7 GatG~iG~~l~~~L~~~g--~~V~~~~R~ 33 (224)
T 3h2s_A 7 GATGRAGSAIVAEARRRG--HEVLAVVRD 33 (224)
T ss_dssp TTTSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred cCCCHHHHHHHHHHHHCC--CEEEEEEec
Confidence 566666678889999999 788877654
No 251
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=25.39 E-value=1.1e+02 Score=26.61 Aligned_cols=45 Identities=22% Similarity=0.169 Sum_probs=33.8
Q ss_pred ccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
++++..+|+++.|+.... --..++..+-+++.+.| +++.+.....
T Consensus 64 ~~~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~~ 108 (344)
T 3kjx_A 64 ASNRVNLVAVIIPSLSNM-VFPEVLTGINQVLEDTE--LQPVVGVTDY 108 (344)
T ss_dssp TTSCCSEEEEEESCSSSS-SHHHHHHHHHHHHTSSS--SEEEEEECTT
T ss_pred hcCCCCEEEEEeCCCCcH-HHHHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 456678899999988655 56677777888899999 7777665543
No 252
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=25.27 E-value=82 Score=26.60 Aligned_cols=47 Identities=13% Similarity=0.237 Sum_probs=29.2
Q ss_pred hhcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 27 HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 27 ~~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+..++++..+|+++.|..... -...++..+-+++.+.| +++.+....
T Consensus 13 r~L~~~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~~~~~g--~~~~~~~~~ 59 (293)
T 2iks_A 13 AGLRAGRTRSIGLVIPDLENT-SYTRIANYLERQARQRG--YQLLIACSE 59 (293)
T ss_dssp -----CCCCEEEEEESCSCSH-HHHHHHHHHHHHHHHTT--CEEEEEECT
T ss_pred HHhhcCCCcEEEEEeCCCcCc-HHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 334566778899999876433 34455566777788889 777766543
No 253
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=25.23 E-value=60 Score=27.41 Aligned_cols=92 Identities=7% Similarity=-0.009 Sum_probs=53.4
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcE--EEc-cCCCHHHHHHHHHhCcE
Q 016535 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV--EFY-KNLLYRDLVKLLGGAVV 358 (388)
Q Consensus 282 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V--~~~-g~v~~~~l~~~~~~adv 358 (388)
|=...+.+|+..+. ... ..-.+.++|. ..+..+.+++.++..|.. .| +|+ |.+++.. ...+..=|+
T Consensus 86 kT~~~L~~A~~~i~-~~~---~~~~iLfVgT-----k~~aq~~V~~~A~~~g~~-yv~~RWlgG~LTN~~-~~~f~~Pdl 154 (253)
T 3bch_A 86 RTWEKLLLAARAIV-AIE---NPADVSVISS-----RNTGQRAVLKFAAATGAT-PIAGRFTPGTFTNQI-QAAFREPRL 154 (253)
T ss_dssp HHHHHHHHHHHHHH-TCS---SGGGEEEEEC-----SHHHHHHHHHHHHHHCCE-EEESCCCTTTTTCCS-CSTTCSCSE
T ss_pred HHHHHHHHHHHHHH-HHh---CCCeEEEEeC-----CHHHHHHHHHHHHHhCCe-eecceecCCcccCcc-ccccCCCCE
Confidence 44455666666665 221 2456788886 445556677778777653 12 233 3333211 112445666
Q ss_pred EEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 359 GIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 359 ~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++.....+. ..++.||...|.|||+-
T Consensus 155 liV~Dp~~e-~~AI~EA~~lgIPvIal 180 (253)
T 3bch_A 155 LVVTDPRAD-HQPLTEASYVNLPTIAL 180 (253)
T ss_dssp EEESCTTTT-HHHHHHHHHTTCCEEEE
T ss_pred EEEECCCcc-chHHHHHHHhCCCEEEE
Confidence 666543222 46899999999999973
No 254
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=25.15 E-value=75 Score=28.10 Aligned_cols=38 Identities=21% Similarity=0.177 Sum_probs=23.5
Q ss_pred HHHHHHHhCcEEEE--cCCCCCCCh---HHHHHHHhCCceEee
Q 016535 348 DLVKLLGGAVVGIH--SMIDEHFGI---SVVEYMAAGAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~~adv~v~--ps~~E~~~~---~vlEAma~G~PVI~~ 385 (388)
++.++++.||++.. |...|+.++ ..++.|--|.-+|=+
T Consensus 187 ~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~ 229 (334)
T 3kb6_A 187 SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINT 229 (334)
T ss_dssp CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEEC
T ss_pred CHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEec
Confidence 45678999996664 445565444 466666666555543
No 255
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=24.84 E-value=61 Score=23.56 Aligned_cols=65 Identities=9% Similarity=-0.010 Sum_probs=32.7
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCce
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP 382 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PV 382 (388)
.+.++++.|.-.. -.++++++++++|- .+.+.|+ +..|.+|.....|..|-.+-.|...|+||
T Consensus 12 ~G~~~ViTG~l~~-----~R~e~k~~ie~~Gg----kv~~sVs--------kkT~~lV~g~~~e~~gsKl~kA~~lgI~I 74 (113)
T 2cok_A 12 SNMKILTLGKLSR-----NKDEVKAMIEKLGG----KLTGTAN--------KASLCISTKKEVEKMNKKMEEVKEANIRV 74 (113)
T ss_dssp SSCEEEECSCCSS-----CHHHHHHHHHHTTC----EEESCST--------TCSEEECCHHHHHHCCHHHHHHHHTTCCE
T ss_pred CCCEEEEEecCCC-----CHHHHHHHHHHCCC----EEcCccc--------cCccEEEECCCCCCCChHHHHHHHCCCcE
Confidence 3556666665421 12355666666552 2345553 23344444322233455666677777776
Q ss_pred Ee
Q 016535 383 IG 384 (388)
Q Consensus 383 I~ 384 (388)
|.
T Consensus 75 vs 76 (113)
T 2cok_A 75 VS 76 (113)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 256
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=24.66 E-value=1.2e+02 Score=26.60 Aligned_cols=79 Identities=10% Similarity=-0.079 Sum_probs=0.0
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+...+.++|-.. .=...++.++..+ .+.+.++|......+.+..+..++.+++.|..-.+. +
T Consensus 154 ~gl~va~vGD~~--~va~Sl~~~~~~~---------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~-------~ 215 (321)
T 1oth_A 154 KGLTLSWIGDGN--NILHSIMMSAAKF---------GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLT-------N 215 (321)
T ss_dssp TTCEEEEESCSS--HHHHHHHTTTGGG---------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEE-------S
T ss_pred CCcEEEEECCch--hhHHHHHHHHHHc---------CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEE-------E
Q ss_pred HHHHHHHhCcEEEEcCC
Q 016535 348 DLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~ 364 (388)
++.+.++.||++..-.|
T Consensus 216 d~~eav~~aDvvy~d~w 232 (321)
T 1oth_A 216 DPLEAAHGGNVLITDTW 232 (321)
T ss_dssp CHHHHHTTCSEEEECCS
T ss_pred CHHHHhccCCEEEEecc
No 257
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=24.55 E-value=1e+02 Score=26.75 Aligned_cols=46 Identities=15% Similarity=0.179 Sum_probs=30.5
Q ss_pred hcccCccceEEEeccc--cCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 28 NARRNRTTSVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~--~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
..++++..+|+++.|+ .... -...++..+.+++.+.| +++.+....
T Consensus 55 ~l~~~~~~~Igvi~~~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 102 (338)
T 3dbi_A 55 NLSAKSTQTLGLVVTNTLYHGI-YFSELLFHAARMAEEKG--RQLLLADGK 102 (338)
T ss_dssp -----CCSEEEEEECTTTTSTT-HHHHHHHHHHHHHHHTT--CEEEEEECT
T ss_pred HhhhCCCCEEEEEecCCcccCh-hHHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 3456677889999998 5433 45566777888888999 777776654
No 258
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=24.55 E-value=1.8e+02 Score=22.36 Aligned_cols=61 Identities=11% Similarity=0.098 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC----c-EEEEcCCCCCCChHHHHHHHh-C-CceE
Q 016535 321 RLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA----V-VGIHSMIDEHFGISVVEYMAA-G-AIPI 383 (388)
Q Consensus 321 ~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a----d-v~v~ps~~E~~~~~vlEAma~-G-~PVI 383 (388)
..+.+++.++++|++ +.|.-.=...++.+.+++| | +.+.|--+-..+..+..|+++ + .|+|
T Consensus 36 i~~~l~~~a~~~g~~--v~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~~P~V 103 (156)
T 1gtz_A 36 VEALCVKAAAAHGGT--VDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPVV 103 (156)
T ss_dssp HHHHHHHHHHTTTCC--EEEEECSCHHHHHHHHHHHHHHCSEEEEECTTHHHHCHHHHHHHHTSTTCCEE
T ss_pred HHHHHHHHHHHcCCE--EEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhcCCCCEE
Confidence 445666677777764 7776655566666655544 4 666787777788888888764 3 5665
No 259
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=24.52 E-value=2.5e+02 Score=23.46 Aligned_cols=31 Identities=10% Similarity=0.093 Sum_probs=17.0
Q ss_pred hCcEEEE-cCCCCCCChHHHHHHHhCCceEeeC
Q 016535 355 GAVVGIH-SMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 355 ~adv~v~-ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
..|.++. |...+...-.+-++. .|.|||+.+
T Consensus 63 ~vdgiii~~~~~~~~~~~~~~~~-~~iPvV~~~ 94 (304)
T 3o1i_D 63 GANAIILGTVDPHAYEHNLKSWV-GNTPVFATV 94 (304)
T ss_dssp TCSEEEECCSSTTSSTTTHHHHT-TTSCEEECS
T ss_pred CCCEEEEeCCChhHHHHHHHHHc-CCCCEEEec
Confidence 4665554 333343333444555 888888764
No 260
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=24.47 E-value=1.4e+02 Score=23.06 Aligned_cols=36 Identities=11% Similarity=-0.116 Sum_probs=22.3
Q ss_pred HHHHhCcEEEEcCC-CCCCChHHH---HHHHhCCceEeeC
Q 016535 351 KLLGGAVVGIHSMI-DEHFGISVV---EYMAAGAIPIGKH 386 (388)
Q Consensus 351 ~~~~~adv~v~ps~-~E~~~~~vl---EAma~G~PVI~~~ 386 (388)
+.+..||++|.--. .+.=+-+.. =|.+.|+||++-.
T Consensus 74 ~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A~gkPVv~~~ 113 (157)
T 1f8y_A 74 NGIKTNDIMLGVYIPDEEDVGLGMELGYALSQGKYVLLVI 113 (157)
T ss_dssp HHHHTSSEEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHhCCEEEEEcCCCCCCccHHHHHHHHHHCCCeEEEEE
Confidence 46799998875421 111122334 4789999999854
No 261
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=24.41 E-value=1.3e+02 Score=26.41 Aligned_cols=67 Identities=19% Similarity=0.095 Sum_probs=40.8
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
++++++-+-+. +.+ ..++.+++++. ... +++.+++. ..|+++..+....-.-.+.+|+.+|+
T Consensus 37 ~~~~lvav~d~----~~~---~~~~~~~~~~~----~~~-----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk 100 (354)
T 3q2i_A 37 DRAELIDVCDI----DPA---ALKAAVERTGA----RGH-----ASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGF 100 (354)
T ss_dssp TTEEEEEEECS----SHH---HHHHHHHHHCC----EEE-----SCHHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CCeEEEEEEcC----CHH---HHHHHHHHcCC----cee-----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCC
Confidence 46777755432 332 45556666653 222 34455565 68988876654433334678999999
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
+|++-
T Consensus 101 ~v~~E 105 (354)
T 3q2i_A 101 HVMTE 105 (354)
T ss_dssp EEEEC
T ss_pred CEEEe
Confidence 99974
No 262
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=24.38 E-value=3.3e+02 Score=23.13 Aligned_cols=68 Identities=4% Similarity=-0.128 Sum_probs=47.5
Q ss_pred CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC-CCHHHHHHHHHhCcEE
Q 016535 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN-LLYRDLVKLLGGAVVG 359 (388)
Q Consensus 281 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~-v~~~~l~~~~~~adv~ 359 (388)
..|++.+++.++.. .+.-+++.+.+..+ .+++.+.++++|+. .|.+... -+.+.+.++.+.+.-|
T Consensus 111 ~~g~~~f~~~~~~a---------GvdGvIipDlp~ee----~~~~~~~~~~~gl~-~I~lvap~t~~eri~~i~~~~~gf 176 (271)
T 3nav_A 111 ARGIDDFYQRCQKA---------GVDSVLIADVPTNE----SQPFVAAAEKFGIQ-PIFIAPPTASDETLRAVAQLGKGY 176 (271)
T ss_dssp HTCHHHHHHHHHHH---------TCCEEEETTSCGGG----CHHHHHHHHHTTCE-EEEEECTTCCHHHHHHHHHHCCSC
T ss_pred HHhHHHHHHHHHHC---------CCCEEEECCCCHHH----HHHHHHHHHHcCCe-EEEEECCCCCHHHHHHHHHHCCCe
Confidence 45778877777766 67777777766543 44788888888886 4555544 4567888888888766
Q ss_pred EEc
Q 016535 360 IHS 362 (388)
Q Consensus 360 v~p 362 (388)
++.
T Consensus 177 iY~ 179 (271)
T 3nav_A 177 TYL 179 (271)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 263
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=24.32 E-value=1.3e+02 Score=21.25 Aligned_cols=39 Identities=13% Similarity=0.043 Sum_probs=25.0
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhc-CCCc-eEEEEecC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEE-SPDL-DCIVYTGD 76 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~-g~~~-~v~v~~~~ 76 (388)
+++++.-..+.+....+....++..+.+. | + +|.++-..
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g--~~~v~vff~~ 43 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQES--NLDLRLFLMS 43 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCT--TCEEEEEECG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCC--CccEEEEEEc
Confidence 45555433333335566678999999999 8 5 66666543
No 264
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=24.32 E-value=2.1e+02 Score=20.78 Aligned_cols=64 Identities=14% Similarity=0.023 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhcCCCC---cEEEccCCCHHHHHHHHH--hCcEEEEcCCCCC-----CChHHHHHH--HhCCceEe
Q 016535 321 RLQSLKDKSIELKVDG---NVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEH-----FGISVVEYM--AAGAIPIG 384 (388)
Q Consensus 321 ~~~~l~~~~~~~~l~~---~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~-----~~~~vlEAm--a~G~PVI~ 384 (388)
..+++.+.+++.+++. .......-+.+.+.++-. .+|++|..+...+ +--++.|.. .+++||+.
T Consensus 71 ~l~~~~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlv 146 (147)
T 3hgm_A 71 IAVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAHCPVLV 146 (147)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCCCCEEE
Confidence 4455566666777764 444443345788888888 7999999865321 212334433 55778764
No 265
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=24.30 E-value=92 Score=26.31 Aligned_cols=85 Identities=9% Similarity=-0.043 Sum_probs=57.8
Q ss_pred EEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC--CHHH
Q 016535 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL--LYRD 348 (388)
Q Consensus 271 ~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v--~~~~ 348 (388)
+++|+|-+.-+-|...+-+.+.+++++ . .++++-+++......+.+...+...++|.+ +.-+|.- ++.+
T Consensus 2 ~ilfiGDi~g~~G~~~v~~~l~~lr~~------~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~D--~~T~GNHefD~~~ 72 (252)
T 2z06_A 2 RVLFIGDVMAEPGLRAVGLHLPDIRDR------Y-DLVIANGENAARGKGLDRRSYRLLREAGVD--LVSLGNHAWDHKE 72 (252)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHGGG------C-SEEEEECTTTTTTSSCCHHHHHHHHHHTCC--EEECCTTTTSCTT
T ss_pred EEEEEEecCCcccHHHHHHHHHHHHhh------C-CEEEEeCCCccCCCCcCHHHHHHHHhCCCC--EEEeccEeeECch
Confidence 588999888777888888888888766 2 466666554322222334566666777876 6666764 3568
Q ss_pred HHHHHHhCcEEEEcCCC
Q 016535 349 LVKLLGGAVVGIHSMID 365 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~ 365 (388)
+.+++.+.+ .+.|..+
T Consensus 73 l~~~l~~~~-~vrpaN~ 88 (252)
T 2z06_A 73 VYALLESEP-VVRPLNY 88 (252)
T ss_dssp HHHHHHHSS-EECCTTS
T ss_pred HHHHhccCC-ceEeecC
Confidence 888999999 7777644
No 266
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=24.21 E-value=55 Score=26.91 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=26.4
Q ss_pred ceEEEeccccCCCC-ChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 35 TSVAFFHPNTNDGG-GGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 35 ~~I~~~~p~~~~gG-G~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
|+|++ .. .|| |--.++.+++..|+++| .+|.++-.+.
T Consensus 1 mkI~v-s~---kGGvGKTt~a~~LA~~la~~g--~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAV-AG---KGGVGKTTVAAGLIKIMASDY--DKIYAVDGDP 38 (254)
T ss_dssp CEEEE-EC---SSSHHHHHHHHHHHHHHTTTC--SCEEEEEECT
T ss_pred CEEEE-ec---CCCCCHHHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 57777 43 332 44456689999999999 7888886664
No 267
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=24.18 E-value=2e+02 Score=20.62 Aligned_cols=63 Identities=11% Similarity=-0.078 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCC-----CChHHHH--HHHhCCceEe
Q 016535 321 RLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEH-----FGISVVE--YMAAGAIPIG 384 (388)
Q Consensus 321 ~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~-----~~~~vlE--Ama~G~PVI~ 384 (388)
..+++.+..++.+++-.......-+.+.+.++-..+|++|+.+...+ +| ++.| ...+.+||+.
T Consensus 67 ~l~~~~~~~~~~g~~~~~~v~~g~~~~~I~~~a~~~dliV~G~~~~~~~~~~~G-s~~~~vl~~~~~pVlv 136 (138)
T 3idf_A 67 LTQKFSTFFTEKGINPFVVIKEGEPVEMVLEEAKDYNLLIIGSSENSFLNKIFA-SHQDDFIQKAPIPVLI 136 (138)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEESCHHHHHHHHHTTCSEEEEECCTTSTTSSCCC-CTTCHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHCCCCeEEEEecCChHHHHHHHHhcCCEEEEeCCCcchHHHHhC-cHHHHHHhcCCCCEEE
Confidence 34445555555666544444433457888888889999998764321 22 2222 2356788765
No 268
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=23.91 E-value=1.5e+02 Score=26.38 Aligned_cols=46 Identities=17% Similarity=0.245 Sum_probs=34.4
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHH
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR 87 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~ 87 (388)
+.++|+|+ |.+.+++..++.++.+.| .++.+.++.....++.+.+.
T Consensus 187 ~glkva~v-------GD~~nva~Sl~~~l~~lG--~~v~~~~P~~~~~~~~i~~~ 232 (353)
T 3sds_A 187 EGLKIAWV-------GDANNVLFDLAIAATKMG--VNVAVATPRGYEIPSHIVEL 232 (353)
T ss_dssp TTCEEEEE-------SCCCHHHHHHHHHHHHTT--CEEEEECCTTCCCCHHHHHH
T ss_pred CCCEEEEE-------CCCchHHHHHHHHHHHcC--CEEEEECCcccCCCHHHHHH
Confidence 68899998 444578889999999999 89998887754334444443
No 269
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=23.87 E-value=85 Score=26.40 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=27.9
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
..|+++..+|+++.|. ... -...++..+.+++.+.| +++.+....
T Consensus 2 ~L~~~~~~~Igvi~~~-~~~-~~~~~~~gi~~~~~~~g--~~~~~~~~~ 46 (288)
T 2qu7_A 2 SLKTGRSNIIAFIVPD-QNP-FFTEVLTEISHECQKHH--LHVAVASSE 46 (288)
T ss_dssp -----CEEEEEEEESS-CCH-HHHHHHHHHHHHHGGGT--CEEEEEECT
T ss_pred ccccCCCCEEEEEECC-CCc-hHHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 3466777899999987 322 34455566777888889 777766543
No 270
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=29.39 E-value=17 Score=20.68 Aligned_cols=23 Identities=22% Similarity=0.304 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 016535 7 LIWAVITAVLASILILASHVHNA 29 (388)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (388)
.+.|++.++..++++|...-|+|
T Consensus 13 avlal~vi~iisLIiLi~~w~qK 35 (39)
T 2l6w_A 13 AILALVVLTIISLIILIMLWQKK 35 (39)
Confidence 34445555555666665544444
No 271
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=23.63 E-value=2.1e+02 Score=27.16 Aligned_cols=38 Identities=21% Similarity=0.133 Sum_probs=31.2
Q ss_pred HHHHHHHh--CcEEEEcCC-CCCCChHHHHHHHh--CCceEee
Q 016535 348 DLVKLLGG--AVVGIHSMI-DEHFGISVVEYMAA--GAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~~--adv~v~ps~-~E~~~~~vlEAma~--G~PVI~~ 385 (388)
++.+.++. +|++|-.|. ...|.--++++|+. -.|||-.
T Consensus 351 ~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFa 393 (555)
T 1gq2_A 351 NLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFA 393 (555)
T ss_dssp CHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEE
T ss_pred CHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEE
Confidence 58888886 999999986 56788889999994 7788754
No 272
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=23.52 E-value=96 Score=26.03 Aligned_cols=44 Identities=7% Similarity=0.031 Sum_probs=32.3
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
|++..+|+++.|..... -...++..+.+++.+.| +++.+.....
T Consensus 2 s~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~~ 45 (291)
T 3l49_A 2 SLEGKTIGITAIGTDHD-WDLKAYQAQIAEIERLG--GTAIALDAGR 45 (291)
T ss_dssp CCTTCEEEEEESCCSSH-HHHHHHHHHHHHHHHTT--CEEEEEECTT
T ss_pred CCCCcEEEEEeCCCCCh-HHHHHHHHHHHHHHHcC--CEEEEEcCCC
Confidence 46678999999987443 44556677888888999 7877776543
No 273
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=23.46 E-value=78 Score=27.54 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=30.3
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
..++++..+|+++.|+.... -...++..+.+++.+.| +++.+....
T Consensus 58 ~l~~~~~~~Igvi~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 103 (333)
T 3jvd_A 58 ALREHRSALVGVIVPDLSNE-YYSESLQTIQQDLKAAG--YQMLVAEAN 103 (333)
T ss_dssp ------CCEEEEEESCSSSH-HHHHHHHHHHHHHHHHT--CEEEEEECC
T ss_pred HhhcCCCCEEEEEeCCCcCh-HHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 34466778899999987544 45566777888888999 777776654
No 274
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=23.41 E-value=85 Score=26.80 Aligned_cols=44 Identities=11% Similarity=0.175 Sum_probs=30.9
Q ss_pred CccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 32 ~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
++.+.|++.......|-|--+++.+||..|+++| .+|.++-.+.
T Consensus 32 ~~~~~i~v~~~s~KGGvGKTT~a~nLA~~la~~G--~rVlliD~D~ 75 (298)
T 2oze_A 32 NKNEAIVILNNYFKGGVGKSKLSTMFAYLTDKLN--LKVLMIDKDL 75 (298)
T ss_dssp HHCSCEEEEECCSSSSSSHHHHHHHHHHHHHHTT--CCEEEEEECT
T ss_pred CCCcEEEEEeccCCCCchHHHHHHHHHHHHHhCC--CeEEEEeCCC
Confidence 3456677775433333366667799999999999 7888876664
No 275
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=23.38 E-value=93 Score=25.95 Aligned_cols=44 Identities=7% Similarity=0.106 Sum_probs=32.5
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
+++..+|+++.|..... -...++..+.+++.+.| +++.++....
T Consensus 4 ~~~s~~Igvi~~~~~~~-~~~~~~~gi~~~~~~~g--~~~~~~~~~~ 47 (276)
T 3jy6_A 4 TQSSKLIAVIVANIDDY-FSTELFKGISSILESRG--YIGVLFDANA 47 (276)
T ss_dssp -CCCCEEEEEESCTTSH-HHHHHHHHHHHHHHTTT--CEEEEEECTT
T ss_pred CCCCcEEEEEeCCCCch-HHHHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 45667899999987544 55667777888899999 7877776553
No 276
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=23.35 E-value=2.8e+02 Score=24.04 Aligned_cols=46 Identities=22% Similarity=0.135 Sum_probs=34.3
Q ss_pred ccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhH
Q 016535 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSL 84 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~ 84 (388)
.+=+.++|+|+ |.+.+++..++.++.+.| .++++.++....+++.+
T Consensus 150 g~l~gl~ia~v-------GD~~rva~Sl~~~~~~~g--~~v~~~~P~~~~~~~~~ 195 (301)
T 2ef0_A 150 GGLAGLEVAWV-------GDGNNVLNSLLEVAPLAG--LKVRVATPKGYEPDPGL 195 (301)
T ss_dssp SCCTTCEEEEE-------SCCCHHHHHHHHHHHHHT--CEEEEECCTTCCCCHHH
T ss_pred CCcCCcEEEEE-------CCCchhHHHHHHHHHHcC--CEEEEECCchhcCCHHH
Confidence 34467899997 334789999999999999 89999888764333333
No 277
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=23.20 E-value=2e+02 Score=26.03 Aligned_cols=63 Identities=16% Similarity=-0.065 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh-CcEEEEcCCCCCCChHHHHHHH-hCCceEeeC
Q 016535 320 ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG-AVVGIHSMIDEHFGISVVEYMA-AGAIPIGKH 386 (388)
Q Consensus 320 ~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~-adv~v~ps~~E~~~~~vlEAma-~G~PVI~~~ 386 (388)
+....|.+.+++.|++ .+....+.+.+.-+-.- +|++=.+|. |-....+|++++ .|+|||-+.
T Consensus 101 e~~~~L~~~~~~~Gi~---~~stpfD~~svd~l~~~~vd~~KIgS~-~~~N~pLL~~va~~gKPViLSt 165 (385)
T 1vli_A 101 EWILPLLDYCREKQVI---FLSTVCDEGSADLLQSTSPSAFKIASY-EINHLPLLKYVARLNRPMIFST 165 (385)
T ss_dssp GGHHHHHHHHHHTTCE---EECBCCSHHHHHHHHTTCCSCEEECGG-GTTCHHHHHHHHTTCSCEEEEC
T ss_pred HHHHHHHHHHHHcCCc---EEEccCCHHHHHHHHhcCCCEEEECcc-cccCHHHHHHHHhcCCeEEEEC
Confidence 3456888888888764 44555565555544333 677777764 345667787665 699999764
No 278
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=23.04 E-value=1e+02 Score=25.77 Aligned_cols=45 Identities=7% Similarity=-0.058 Sum_probs=30.0
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEe
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYT 74 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~ 74 (388)
-..+...|+|+++.-....+|-...++..+++.+.+.| +++.++-
T Consensus 28 ~~~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g--~eve~id 72 (247)
T 2q62_A 28 PAFSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFG--AEVKVFD 72 (247)
T ss_dssp CCCCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTT--CEEEECC
T ss_pred hhccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCC--CEEEEEE
Confidence 34455678888886555555345566667888888888 6766654
No 279
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=23.02 E-value=2.7e+02 Score=23.15 Aligned_cols=26 Identities=8% Similarity=-0.143 Sum_probs=17.6
Q ss_pred HHHHHHHHhCcEEEE--cCCCCCCChHH
Q 016535 347 RDLVKLLGGAVVGIH--SMIDEHFGISV 372 (388)
Q Consensus 347 ~~l~~~~~~adv~v~--ps~~E~~~~~v 372 (388)
.++.+.+.+||.+|+ |.++-+++-.+
T Consensus 90 ~~l~~~i~~AD~iI~~sP~Yn~sipa~L 117 (247)
T 2q62_A 90 QELRELSIWSEGQVWVSPERHGAMTGIM 117 (247)
T ss_dssp HHHHHHHHHCSEEEEEEECSSSSCCHHH
T ss_pred HHHHHHHHHCCEEEEEeCCCCCCccHHH
Confidence 567778889996665 44555666554
No 280
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=22.96 E-value=94 Score=24.94 Aligned_cols=27 Identities=15% Similarity=0.112 Sum_probs=21.1
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
||...+=..+++.|.+.| ++|+++...
T Consensus 7 GatG~iG~~l~~~L~~~g--~~V~~~~R~ 33 (219)
T 3dqp_A 7 GSTGRVGKSLLKSLSTTD--YQIYAGARK 33 (219)
T ss_dssp STTSHHHHHHHHHHTTSS--CEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHCC--CEEEEEECC
Confidence 566666678899999999 888887754
No 281
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=22.94 E-value=76 Score=25.93 Aligned_cols=91 Identities=15% Similarity=-0.017 Sum_probs=52.7
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcE--EEc-cCCCHHHHHHHHHhCcE
Q 016535 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV--EFY-KNLLYRDLVKLLGGAVV 358 (388)
Q Consensus 282 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V--~~~-g~v~~~~l~~~~~~adv 358 (388)
|=...+.+|+..+.+- ..-.+.++|.- .+..+.+++.++..|.. .| +|+ |..++..+. -+..=|+
T Consensus 51 kT~~~L~~A~~~i~~i-----~~~~iLfVgTk-----~~~~~~V~~~A~~~g~~-~v~~rwlgG~LTN~~~~-~f~~Pdl 118 (208)
T 1vi6_A 51 KLDERIRVAAKFLSRY-----EPSKILLVAAR-----QYAHKPVQMFSKVVGSD-YIVGRFIPGTLTNPMLS-EYREPEV 118 (208)
T ss_dssp HHHHHHHHHHHHHTTS-----CGGGEEEEECS-----GGGHHHHHHHHHHHCCE-EEESSCCTTTTTCTTST-TCCCCSE
T ss_pred HHHHHHHHHHHHHHhc-----CCCEEEEEeCC-----HHHHHHHHHHHHHhCCe-eecCEECCCcccChhhH-hhCCCCE
Confidence 4445555666655433 24577888863 33345667777776653 22 233 444433322 2345666
Q ss_pred EEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 359 GIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 359 ~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++.....+ =..++.||...|.|||+-
T Consensus 119 liV~Dp~~-e~~ai~EA~~l~IPvIal 144 (208)
T 1vi6_A 119 VFVNDPAI-DKQAVSEATAVGIPVVAL 144 (208)
T ss_dssp EEESCTTT-THHHHHHHHHTTCCEEEE
T ss_pred EEEECCCc-chhHHHHHHHhCCCEEEE
Confidence 66654322 246899999999999983
No 282
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=22.90 E-value=1.6e+02 Score=20.51 Aligned_cols=25 Identities=24% Similarity=0.142 Sum_probs=19.9
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 016535 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVG 311 (388)
Q Consensus 282 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG 311 (388)
++....++.+..+.++. ++..+++|
T Consensus 34 ~~~~~~~~~l~~li~e~-----~v~~iVvG 58 (98)
T 1iv0_A 34 KTLEEDVEALLDFVRRE-----GLGKLVVG 58 (98)
T ss_dssp CCHHHHHHHHHHHHHHH-----TCCEEEEE
T ss_pred cCcHHHHHHHHHHHHHc-----CCCEEEEe
Confidence 45677778888888885 78899999
No 283
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=22.79 E-value=88 Score=25.97 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=36.0
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCC
Q 016535 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~ 365 (388)
..-.+++|+...- ..+...++.+.+++.++| -|.|.+.. +. +...+|.+++||..
T Consensus 31 GtD~i~vGGs~gv-t~~~~~~~v~~ik~~~~P-vvlfp~~~--~~---v~~gaD~~l~psll 85 (228)
T 3vzx_A 31 GTDAVIIGGSDGV-TEDNVLRMMSKVRRFLVP-CVLEVSAI--EA---IVPGFDLYFIPSVL 85 (228)
T ss_dssp SCSEEEECCCSCC-CHHHHHHHHHHHTTSSSC-EEEECSCG--GG---CCSCCSEEEEEEET
T ss_pred CCCEEEECCcCCC-CHHHHHHHHHHhhccCCC-EEEeCCCH--HH---ccccCCEEEEeeec
Confidence 5778889975422 234455565666666776 56777774 22 45799999999743
No 284
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=22.69 E-value=3.1e+02 Score=22.23 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=0.0
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccc
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (388)
++.++||+++ -. |.+..+..+..++.+.+..++|..+.+.. +.....+...+ .++.++.+....+
T Consensus 4 ~m~~~ri~vl--~S----G~gsnl~all~~~~~~~l~~~I~~Visn~--~~a~~l~~A~~-------~gIp~~~~~~~~~ 68 (209)
T 4ds3_A 4 SMKRNRVVIF--IS----GGGSNMEALIRAAQAPGFPAEIVAVFSDK--AEAGGLAKAEA-------AGIATQVFKRKDF 68 (209)
T ss_dssp --CCEEEEEE--ES----SCCHHHHHHHHHHTSTTCSEEEEEEEESC--TTCTHHHHHHH-------TTCCEEECCGGGS
T ss_pred cCCCccEEEE--EE----CCcHHHHHHHHHHHcCCCCcEEEEEEECC--cccHHHHHHHH-------cCCCEEEeCcccc
Q ss_pred cccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-hhhhcCCeEE
Q 016535 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVI 165 (388)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~~~~~~~~~i 165 (388)
-.+..+.. .....+...+||+++........-+ +....+..++
T Consensus 69 ~~r~~~d~------------~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~i 112 (209)
T 4ds3_A 69 ASKEAHED------------AILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRIL 112 (209)
T ss_dssp SSHHHHHH------------HHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEE
T ss_pred CCHHHHHH------------HHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeE
No 285
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=22.65 E-value=74 Score=29.60 Aligned_cols=37 Identities=14% Similarity=-0.073 Sum_probs=27.6
Q ss_pred HHHHHHHhCcEEEEcCCC--CCCChHHHHHHHhCCceEee
Q 016535 348 DLVKLLGGAVVGIHSMID--EHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~--E~~~~~vlEAma~G~PVI~~ 385 (388)
.+.+.++.+|+++-.|.. ..|.--++++|+ -.|||-.
T Consensus 287 ~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma-~~PIIFa 325 (487)
T 3nv9_A 287 SIAEACVGADVLISLSTPGPGVVKAEWIKSMG-EKPIVFC 325 (487)
T ss_dssp SHHHHHTTCSEEEECCCSSCCCCCHHHHHTSC-SSCEEEE
T ss_pred CHHHHHhcCCEEEEecccCCCCCCHHHHHhhc-CCCEEEE
Confidence 467778889999988854 457777888886 6777753
No 286
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=22.56 E-value=3.4e+02 Score=22.68 Aligned_cols=158 Identities=8% Similarity=-0.042 Sum_probs=71.4
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHH
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~ 293 (388)
++++.-+..|.+++.+....+.+.+. ....++..+. ..++....-........ ..+..+. ...+....++ .
T Consensus 55 ~~~l~~~~vDgII~~~~~~~~~~~~~-~~~iPvV~~~-~~~~~~~~~v~~~~~~~-~~~~gv~---~~~~~~~~~~---~ 125 (295)
T 3lft_A 55 SKQLVANGNDLVVGIATPAAQGLASA-TKDLPVIMAA-ITDPIGANLVKDLKKPG-GNVTGVS---DHNPAQQQVE---L 125 (295)
T ss_dssp HHHHTTSSCSEEEEESHHHHHHHHHH-CSSSCEEEES-CSCTTTTTSCSCSSCCC-SSEEEEE---ECCCHHHHHH---H
T ss_pred HHHHHhcCCCEEEECCcHHHHHHHHc-CCCCCEEEEe-ccChhhcCccccccCCC-CcEEEEE---CCccHHHHHH---H
Confidence 45555678999998876544444433 2122333322 11211100000000011 1233332 2445554444 4
Q ss_pred HHHHhcCCCC-CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC-C-HHHHHHHHHhCcEEEEcCCCCCCCh
Q 016535 294 ALRKLDADLP-RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL-L-YRDLVKLLGGAVVGIHSMIDEHFGI 370 (388)
Q Consensus 294 l~~~~~~~~~-~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v-~-~~~l~~~~~~adv~v~ps~~E~~~~ 370 (388)
+.+.. | .-++.++++.......+..+.+++..+++|++-........ + .+.+.++....|++++++..-.+|
T Consensus 126 l~~~~----pg~~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~~~~~~~~~~~~~l~~~~dai~~~~D~~a~g- 200 (295)
T 3lft_A 126 IKALT----PNVKTIGALYSSSEDNSKTQVEEFKAYAEKAGLTVETFAVPSTNEIASTVTVMTSKVDAIWVPIDNTIAS- 200 (295)
T ss_dssp HHHHC----TTCCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHTTTCSEEEECSCHHHHH-
T ss_pred HHHhC----CCCcEEEEEeCCCCcchHHHHHHHHHHHHHcCCEEEEEecCCHHHHHHHHHHHHhcCCEEEECCchhHHH-
Confidence 44432 2 23555554432211234567788888888875221111111 1 233444556678888876432222
Q ss_pred HHHHHH-----HhCCceEeeC
Q 016535 371 SVVEYM-----AAGAIPIGKH 386 (388)
Q Consensus 371 ~vlEAm-----a~G~PVI~~~ 386 (388)
.++++ ..++||++.|
T Consensus 201 -~~~~l~~~~~~~~i~vig~d 220 (295)
T 3lft_A 201 -GFPTVVSSNQSSKKPIYPSA 220 (295)
T ss_dssp -THHHHHHHTTTTCCCEEESS
T ss_pred -HHHHHHHHHHHcCCCEEeCC
Confidence 22222 3578888865
No 287
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=22.45 E-value=1.4e+02 Score=25.82 Aligned_cols=67 Identities=13% Similarity=0.044 Sum_probs=40.1
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCCc
Q 016535 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAI 381 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~P 381 (388)
+++++-+-+. +.+ ..++.+++++.+ .+ .+++.+++. .+|+++..+....-.-.+.+|+..|++
T Consensus 24 ~~~~vav~d~----~~~---~~~~~~~~~g~~-~~-------~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~ 88 (332)
T 2glx_A 24 GGEVVSMMST----SAE---RGAAYATENGIG-KS-------VTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKH 88 (332)
T ss_dssp TCEEEEEECS----CHH---HHHHHHHHTTCS-CC-------BSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCE
T ss_pred CCeEEEEECC----CHH---HHHHHHHHcCCC-cc-------cCCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCe
Confidence 5666644432 332 445556666543 11 134556666 489888776554434456789999999
Q ss_pred eEee
Q 016535 382 PIGK 385 (388)
Q Consensus 382 VI~~ 385 (388)
|++-
T Consensus 89 v~~e 92 (332)
T 2glx_A 89 VLCE 92 (332)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9874
No 288
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=22.39 E-value=64 Score=26.18 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=38.1
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCce
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP 382 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PV 382 (388)
.++++.+-|-. +. ++++.++++|. .+.... ..+.-+|.+... -...++.|++.|+||
T Consensus 11 ~~~~v~~sG~~----~~----~~~~~i~~lGg----~~~~~~---------~~~THlI~~~~~--rt~K~l~a~~~g~~I 67 (209)
T 2etx_A 11 TAPKVLFTGVV----DA----RGERAVLALGG----SLAGSA---------AEASHLVTDRIR--RTVKFLCALGRGIPI 67 (209)
T ss_dssp -CCEEEECSSC----CH----HHHHHHHHTTC----EECSST---------TTCSEEECSSCC--CSHHHHHHHHHTCCE
T ss_pred CCcEEEEeCCC----cH----HHHHHHHHCCC----EEeCCC---------CCceEEEECCCC--CCHHHHHHHhcCCcc
Confidence 46777776653 21 35777777764 222222 235656665422 246789999999999
Q ss_pred EeeCC
Q 016535 383 IGKHF 387 (388)
Q Consensus 383 I~~~~ 387 (388)
|.+++
T Consensus 68 V~~~W 72 (209)
T 2etx_A 68 LSLDW 72 (209)
T ss_dssp ECTHH
T ss_pred ccHHH
Confidence 98753
No 289
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=22.28 E-value=1e+02 Score=24.23 Aligned_cols=40 Identities=10% Similarity=0.064 Sum_probs=27.0
Q ss_pred CccceEEEeccccCCCCChhhHHHHHHHHHhh-cCCCceEEEEec
Q 016535 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQE-ESPDLDCIVYTG 75 (388)
Q Consensus 32 ~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~-~g~~~~v~v~~~ 75 (388)
|.-|+|+++.-. ..|-.++++..+++.|.+ .| +++.++.-
T Consensus 2 ~~M~kiliiy~S--~~GnT~~~a~~i~~~l~~~~g--~~v~~~~l 42 (188)
T 2ark_A 2 NAMGKVLVIYDT--RTGNTKKMAELVAEGARSLEG--TEVRLKHV 42 (188)
T ss_dssp CCCEEEEEEECC--SSSHHHHHHHHHHHHHHTSTT--EEEEEEET
T ss_pred CCCCEEEEEEEC--CCcHHHHHHHHHHHHHhhcCC--CeEEEEEh
Confidence 333466665322 345788888999999998 88 67666543
No 290
>1ogd_A High affinity ribose transport protein RBSD; sugar transport; HET: RIP; 1.95A {Bacillus subtilis} SCOP: c.133.1.1 PDB: 1ogc_A* 1oge_A* 1ogf_A
Probab=22.23 E-value=74 Score=23.83 Aligned_cols=82 Identities=12% Similarity=0.056 Sum_probs=50.2
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEE
Q 016535 280 PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVG 359 (388)
Q Consensus 280 ~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~ 359 (388)
...|+..+++.++.+.+.. .+.=+++-......+.+..+++++.. + ++. ..++++++..+.-++|-++
T Consensus 44 ~~~g~P~f~~vL~aIl~~~-----~ve~~~~a~e~~~~~p~~~~~~~~~~---~---~~~-i~~i~h~~Fy~~~~~a~av 111 (131)
T 1ogd_A 44 LKPGLPAFQDTAAVLAEEM-----AVEKVIAAAEIKASNQENAKFLENLF---S---EQE-IEYLSHEEFKLLTKDAKAV 111 (131)
T ss_dssp CBTTBSCHHHHHHHHHHHS-----CEEEEEEETHHHHHCHHHHHHHHHHT---S---SSE-EEEECHHHHHHHGGGCSEE
T ss_pred cCCCCCCHHHHHHHHHHhC-----CcceEEEeeccCCCCHHHHHHHHHhc---C---CCc-eEEeCHHHHHHHHhCceEE
Confidence 3478887777777776664 44444444321111223333343332 2 222 5557889999999999999
Q ss_pred EEcCCCCCCChHHH
Q 016535 360 IHSMIDEHFGISVV 373 (388)
Q Consensus 360 v~ps~~E~~~~~vl 373 (388)
|.+...-.|+..++
T Consensus 112 VrTGE~~pYaNiIL 125 (131)
T 1ogd_A 112 IRTGEFTPYANCIL 125 (131)
T ss_dssp EECCCCSTTCCEEE
T ss_pred EECCCCCcccEEEE
Confidence 99988778877653
No 291
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=22.16 E-value=85 Score=27.35 Aligned_cols=37 Identities=14% Similarity=0.107 Sum_probs=24.3
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
..+.|+|++. ||.+-+=..+++.|.++| ++|+++...
T Consensus 16 ~~~~~~vlVt-------GatG~iG~~l~~~L~~~G--~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVT-------GSAGRVGRAVVAALRTQG--RTVRGFDLR 52 (347)
T ss_dssp -----CEEEE-------TTTSHHHHHHHHHHHHTT--CCEEEEESS
T ss_pred ccCCCEEEEE-------CCCChHHHHHHHHHHhCC--CEEEEEeCC
Confidence 3456677766 666777778889999999 777776544
No 292
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=22.14 E-value=1.4e+02 Score=26.53 Aligned_cols=75 Identities=11% Similarity=-0.087 Sum_probs=48.3
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
...+.|+|-+ ..=...++.++..+ .+.+.+++......+.+..+..++.+++.|. .+.+.. +
T Consensus 175 glkva~vGD~--~rva~Sl~~~~~~~---------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~--~v~~~~-----d 236 (339)
T 4a8t_A 175 DCKVVFVGDA--TQVCFSLGLITTKM---------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGG--SFLVTD-----D 236 (339)
T ss_dssp GCEEEEESSC--CHHHHHHHHHHHHT---------TCEEEEECCTTSSCCHHHHHHHHHHHHHHCC--EEEEEC-----C
T ss_pred CCEEEEECCC--chhHHHHHHHHHHc---------CCEEEEECCcccCCCHHHHHHHHHHHHHcCC--EEEEEC-----C
Confidence 4789999976 11134455555544 7899999986555555566666666676663 355543 3
Q ss_pred HHHHHHhCcEEEEc
Q 016535 349 LVKLLGGAVVGIHS 362 (388)
Q Consensus 349 l~~~~~~adv~v~p 362 (388)
+. .++.||++..-
T Consensus 237 ~~-av~~aDvvytd 249 (339)
T 4a8t_A 237 AS-SVEGADFLYTD 249 (339)
T ss_dssp GG-GGTTCSEEEEC
T ss_pred hh-HHcCCCEEEec
Confidence 34 68999987753
No 293
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=22.11 E-value=90 Score=18.12 Aligned_cols=16 Identities=44% Similarity=0.852 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 016535 7 LIWAVITAVLASILIL 22 (388)
Q Consensus 7 ~~~~~~~~~~~~~~~~ 22 (388)
-+|-++++++..+++|
T Consensus 9 p~wiIi~s~l~GLllL 24 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLL 24 (42)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH
Confidence 3444444444444444
No 294
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=22.06 E-value=1.1e+02 Score=26.76 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=27.6
Q ss_pred cceEEEeccccCCCC-ChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 34 TTSVAFFHPNTNDGG-GGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 34 ~~~I~~~~p~~~~gG-G~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
.+.|++. ++|| |=.++..+|+.+|++.| .+|.++-.++
T Consensus 48 aKVIAIa----GKGGVGKTTtavNLA~aLA~~G--kkVllID~Dp 86 (314)
T 3fwy_A 48 AKVFAVY----GKGGIGKSTTSSNLSAAFSILG--KRVLQIGCDP 86 (314)
T ss_dssp CEEEEEE----CSTTSSHHHHHHHHHHHHHHTT--CCEEEEEESS
T ss_pred ceEEEEE----CCCccCHHHHHHHHHHHHHHCC--CeEEEEecCC
Confidence 4456764 5663 44456689999999999 7888887664
No 295
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=22.05 E-value=2.7e+02 Score=23.16 Aligned_cols=92 Identities=8% Similarity=-0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC---HHHHHHHH--HhCcEEEEc
Q 016535 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL---YRDLVKLL--GGAVVGIHS 362 (388)
Q Consensus 288 l~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~---~~~l~~~~--~~adv~v~p 362 (388)
+.+++.|+.+. ...--+++ ........+..+.+++.++++|.. +.+...-. ..+..+.+ ...|.++..
T Consensus 1 m~~Ar~L~~~~----~~~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~~--~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~ 73 (289)
T 3k9c_A 1 MSLAQKLRQAS----SRLLGVVF-ELQQPFHGDLVEQIYAAATRRGYD--VMLSAVAPSRAEKVAVQALMRERCEAAILL 73 (289)
T ss_dssp ----------------CEEEEEE-ETTCHHHHHHHHHHHHHHHHTTCE--EEEEEEBTTBCHHHHHHHHTTTTEEEEEEE
T ss_pred ChhhhhhhcCC----CCEEEEEE-ecCCchHHHHHHHHHHHHHHCCCE--EEEEeCCCCHHHHHHHHHHHhCCCCEEEEE
Q ss_pred CCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 363 MIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 363 s~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+....- ..++.+..|.|+|.-|..
T Consensus 74 ~~~~~~--~~~~~~~~~iPvV~i~~~ 97 (289)
T 3k9c_A 74 GTRFDT--DELGALADRVPALVVARA 97 (289)
T ss_dssp TCCCCH--HHHHHHHTTSCEEEESSC
T ss_pred CCCCCH--HHHHHHHcCCCEEEEcCC
No 296
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=22.03 E-value=1.1e+02 Score=24.91 Aligned_cols=35 Identities=9% Similarity=0.201 Sum_probs=25.4
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+.|+|++. ||...+=..+++.|.++| ++|+++...
T Consensus 20 ~~~~ilVt-------GatG~iG~~l~~~L~~~G--~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVV-------GANGKVARYLLSELKNKG--HEPVAMVRN 54 (236)
T ss_dssp -CCEEEEE-------TTTSHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred CCCeEEEE-------CCCChHHHHHHHHHHhCC--CeEEEEECC
Confidence 56677766 566666677889999999 788887754
No 297
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=22.01 E-value=1.4e+02 Score=25.63 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=20.8
Q ss_pred HHhCcEEEEcCCCCCCChH----HHHHHHhCCceEee
Q 016535 353 LGGAVVGIHSMIDEHFGIS----VVEYMAAGAIPIGK 385 (388)
Q Consensus 353 ~~~adv~v~ps~~E~~~~~----vlEAma~G~PVI~~ 385 (388)
++..|++|+-...+.++-. +.+++..|.++|+.
T Consensus 56 L~~~D~vV~~~~~~~l~~~~~~~l~~yV~~Ggglv~~ 92 (281)
T 4e5v_A 56 FSPYQLVVLDYNGDSWPEETNRRFLEYVQNGGGVVIY 92 (281)
T ss_dssp CTTCSEEEECCCSSCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred hhcCCEEEEeCCCCcCCHHHHHHHHHHHHcCCCEEEE
Confidence 6778888854333334333 56667888888764
No 298
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=21.95 E-value=1.2e+02 Score=23.73 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=24.7
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
|+|++. ||...+=..+++.|.++| ++|+++...
T Consensus 4 ~~ilVt-------GatG~iG~~l~~~l~~~g--~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF-------GATGQTGLTTLAQAVQAG--YEVTVLVRD 36 (206)
T ss_dssp CEEEEE-------STTSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CEEEEE-------cCCcHHHHHHHHHHHHCC--CeEEEEEeC
Confidence 566665 566666778889999999 788877654
No 299
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=21.84 E-value=1.2e+02 Score=22.82 Aligned_cols=36 Identities=11% Similarity=0.208 Sum_probs=25.2
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+...++|+++ |++.+-..+++.|.+.| ++|+++...
T Consensus 16 ~~~~~~v~Ii--------G~G~iG~~la~~L~~~g--~~V~vid~~ 51 (155)
T 2g1u_A 16 KQKSKYIVIF--------GCGRLGSLIANLASSSG--HSVVVVDKN 51 (155)
T ss_dssp -CCCCEEEEE--------CCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred ccCCCcEEEE--------CCCHHHHHHHHHHHhCC--CeEEEEECC
Confidence 3456677777 23566667888999999 788887654
No 300
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=21.79 E-value=1.8e+02 Score=27.45 Aligned_cols=79 Identities=15% Similarity=0.066 Sum_probs=51.9
Q ss_pred CcEEEEEeCCCCC-ccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHH--HhCC
Q 016535 304 RPRLQFVGSCRNK-SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYM--AAGA 380 (388)
Q Consensus 304 ~~~l~ivG~~~~~-~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAm--a~G~ 380 (388)
+-.+.|+|..+.. .+.....+++++.++.|++-++.+.|.-+-+|+.++ ..|++-+..+.. .+....++| .+|+
T Consensus 153 ~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~~pgg~t~~ei~~~-~~A~~niv~~~~--~g~~~A~~Le~r~Gi 229 (525)
T 3aek_B 153 EVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAPLGASPDDLRKL-GQAHFNVLMYPE--TGESAARHLERACKQ 229 (525)
T ss_dssp SCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEEEETTCCHHHHHTG-GGSSEEEECCHH--HHHHHHHHHHHHSCC
T ss_pred CCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhh-ccCCEEEEEChh--hHHHHHHHHHHHcCC
Confidence 4589999976432 122445789999999999877778888777887764 444544443211 345666666 4688
Q ss_pred ceEee
Q 016535 381 IPIGK 385 (388)
Q Consensus 381 PVI~~ 385 (388)
|.+..
T Consensus 230 P~i~~ 234 (525)
T 3aek_B 230 PFTKI 234 (525)
T ss_dssp CBCCC
T ss_pred Cceec
Confidence 87653
No 301
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=21.79 E-value=3.6e+02 Score=23.41 Aligned_cols=50 Identities=12% Similarity=0.060 Sum_probs=35.8
Q ss_pred cccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHH
Q 016535 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLA 86 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~ 86 (388)
+.+=+.++|+|+-+ |-.+++..++.++.+.| .++++.++....+++.+.+
T Consensus 143 ~g~l~gl~va~vGD------~~~rva~Sl~~~~~~~g--~~v~~~~P~~~~~~~~~~~ 192 (307)
T 2i6u_A 143 KGALRGLRLSYFGD------GANNMAHSLLLGGVTAG--IHVTVAAPEGFLPDPSVRA 192 (307)
T ss_dssp HSCCTTCEEEEESC------TTSHHHHHHHHHHHHTT--CEEEEECCTTSCCCHHHHH
T ss_pred hCCcCCeEEEEECC------CCcCcHHHHHHHHHHCC--CEEEEECCccccCCHHHHH
Confidence 33446789999732 12589999999999999 8999988876444444443
No 302
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=21.68 E-value=1.1e+02 Score=26.36 Aligned_cols=45 Identities=13% Similarity=0.069 Sum_probs=29.7
Q ss_pred cccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
.++++..+|+++.|..... -...++..+.+++.+.| +++.+....
T Consensus 55 l~~~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 99 (332)
T 2hsg_A 55 LASKKTTTVGVIIPDISNI-FYAELARGIEDIATMYK--YNIILSNSD 99 (332)
T ss_dssp HTTC-CCEEEEEEC--CCS-HHHHHHHHHHHHHHHHT--CEEEEEECC
T ss_pred HHhCCCCEEEEEeCCCCCc-HHHHHHHHHHHHHHHcC--CEEEEEeCC
Confidence 3556778899999986443 44566667778888899 777766543
No 303
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=21.65 E-value=1.8e+02 Score=21.70 Aligned_cols=38 Identities=11% Similarity=-0.133 Sum_probs=27.7
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEec
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~ 75 (388)
+++|+....+.|.-..+-.++++.++...| +++.|+--
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~--~~v~Vff~ 44 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFD--QDVCVLFL 44 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGC--CEEEEEEC
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCC--CCEEEEEE
Confidence 477776555555457788899999999999 56666654
No 304
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=21.62 E-value=1e+02 Score=25.14 Aligned_cols=35 Identities=11% Similarity=0.071 Sum_probs=24.0
Q ss_pred ceEEEeccccCCCCChhhH--HHHHHHHHhhcCCCceEEEEecC
Q 016535 35 TSVAFFHPNTNDGGGGERV--LWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~--~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
++|++.. . ||+.-+ ..++++.|.+.| ++|.++.+.
T Consensus 6 k~Illgi--T---Gsiaayk~~~~ll~~L~~~g--~eV~vv~T~ 42 (207)
T 3mcu_A 6 KRIGFGF--T---GSHCTYEEVMPHLEKLIAEG--AEVRPVVSY 42 (207)
T ss_dssp CEEEEEE--C---SCGGGGTTSHHHHHHHHHTT--CEEEEEECC
T ss_pred CEEEEEE--E---ChHHHHHHHHHHHHHHHhCC--CEEEEEEeh
Confidence 4565542 2 455555 789999999999 777777655
No 305
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=21.60 E-value=2e+02 Score=19.76 Aligned_cols=47 Identities=23% Similarity=-0.016 Sum_probs=29.7
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
.......+.+++.+.+..+|+++...........+-.+...|++.+-
T Consensus 52 ~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 52 TKQVDAKDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp EEECCTTCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEEC
T ss_pred EEEecCCCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEE
Confidence 33334445678888999999999876433322334455677887663
No 306
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=21.52 E-value=1.7e+02 Score=24.07 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=20.8
Q ss_pred hhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 50 GERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 50 ~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
++.+....++.|.+.| .+|+|+.+..
T Consensus 39 gG~va~~ka~~Ll~~G--A~VtVvap~~ 64 (223)
T 3dfz_A 39 GGTIATRRIKGFLQEG--AAITVVAPTV 64 (223)
T ss_dssp CSHHHHHHHHHHGGGC--CCEEEECSSC
T ss_pred CCHHHHHHHHHHHHCC--CEEEEECCCC
Confidence 3467788899999999 8889988653
No 307
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=21.47 E-value=1.2e+02 Score=26.28 Aligned_cols=93 Identities=6% Similarity=-0.129 Sum_probs=53.1
Q ss_pred CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC-CcEEEc-cCCCHHHHHHHHHhCcE
Q 016535 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEFY-KNLLYRDLVKLLGGAVV 358 (388)
Q Consensus 281 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-~~V~~~-g~v~~~~l~~~~~~adv 358 (388)
.|=...+.+|+..+..- . ..-.+.++|. ..+..+.+.+.++..|.. -+=+|+ |.+++.. ...++.=|+
T Consensus 56 ~kT~e~L~~Aa~~I~~i-~---~~~~ILfVgT-----k~~aq~aV~k~A~~tG~~yV~~RWlgGtLTN~~-t~~f~ePdl 125 (305)
T 3iz6_A 56 GKTWEKLQLAARVIVAI-E---NPQDIIVQSA-----RPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQL-QTSFSEPRL 125 (305)
T ss_dssp HHHHHHHHHHHHHHHHT-T---SSCCEEEECC-----SHHHHHHHHHHHHHHTCEEECSCCCTTTTTTTT-TSCSSCCSE
T ss_pred HHHHHHHHHHHHHHHHH-h---CCCeEEEEeC-----cHHHHHHHHHHHHHhCCccccCcccCCcccCcc-cccccCCce
Confidence 34456666777666542 1 1345678886 444455677777766542 111234 3333221 122455577
Q ss_pred EEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 359 GIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 359 ~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
++.....+. ..++.||...|.|+|+
T Consensus 126 lvV~Dp~~d-~qAI~EA~~lnIPtIA 150 (305)
T 3iz6_A 126 LILTDPRTD-HQPIKESALGNIPTIA 150 (305)
T ss_dssp EEESCTTTT-HHHHHHHHHHTCCEEE
T ss_pred eEEeCcccc-hHHHHHHHHcCCCEEE
Confidence 766643322 4678999999999997
No 308
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=21.32 E-value=1e+02 Score=26.72 Aligned_cols=45 Identities=16% Similarity=0.085 Sum_probs=28.3
Q ss_pred cccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
.++++..+|+++.|+.... -...++..+.+++.+.| +++.+....
T Consensus 58 l~~~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~~~~~g--~~~~~~~~~ 102 (332)
T 2o20_A 58 LASKRTTTVGVILPTITST-YFAAITRGVDDIASMYK--YNMILANSD 102 (332)
T ss_dssp ----CCCEEEEEESCTTCH-HHHHHHHHHHHHHHHTT--CEEEEEECT
T ss_pred HhcCCCCEEEEEeCCCCCc-HHHHHHHHHHHHHHHcC--CEEEEEECC
Confidence 3456677899999876433 34455566777788889 777766544
No 309
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=21.31 E-value=1.5e+02 Score=24.94 Aligned_cols=65 Identities=11% Similarity=0.083 Sum_probs=42.8
Q ss_pred CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCc
Q 016535 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAV 357 (388)
Q Consensus 281 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ad 357 (388)
....+...+++..+. ++ |++.. +++. | .......+.+++.|+.+.|.+.|.-....+.+.+..-.
T Consensus 176 ~~~~~~~~~~~~~~l-~~----~~~~a-i~~~-----d-~~a~g~~~al~~~g~~~di~vvg~d~~p~~~~~i~~g~ 240 (304)
T 3o1i_D 176 DNDKELQRNLVQRVI-DM----GNIDY-IVGS-----A-VAIEAAISELRSADKTHDIGLVSVYLSHGVYRGLLRNK 240 (304)
T ss_dssp CSCHHHHHHHHHHHH-HH----SCCSE-EEEC-----H-HHHHHHHHHHTTTTCGGGSEEBCSSCCHHHHHHHTTTS
T ss_pred CCcHHHHHHHHHHHH-cC----CCCCE-EEec-----C-cchHHHHHHHHhcCCCCCeEEEEeCCCHHHHHHHHcCc
Confidence 345666777777777 54 56666 6663 3 33334556677888877899999876666666666554
No 310
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=21.28 E-value=1.4e+02 Score=26.30 Aligned_cols=50 Identities=12% Similarity=0.178 Sum_probs=34.6
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCC--CchhHHHHh
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDA--FPDSLLARA 88 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~--~~~~~~~~~ 88 (388)
+=+.++|+|+-+- ..+++..++.++.+.| .++++.++.... +.+.+.++.
T Consensus 158 ~l~gl~va~vGD~------~~~va~Sl~~~~~~~G--~~v~~~~P~~~~~~p~~~~~~~~ 209 (328)
T 3grf_A 158 GFKGIKFAYCGDS------MNNVTYDLMRGCALLG--MECHVCCPDHKDFKPIKEVIDEC 209 (328)
T ss_dssp TGGGCCEEEESCC------SSHHHHHHHHHHHHHT--CEEEEECCSSGGGSCCHHHHHHH
T ss_pred ccCCcEEEEeCCC------CcchHHHHHHHHHHcC--CEEEEECChHhhhCCCHHHHHHH
Confidence 3467899998321 1478888999999999 899998876533 334444433
No 311
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=21.16 E-value=3.6e+02 Score=22.50 Aligned_cols=98 Identities=9% Similarity=-0.037 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH--hCcEEEE
Q 016535 284 HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG--GAVVGIH 361 (388)
Q Consensus 284 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ 361 (388)
-..+++.+..+.+... -.++++-+..... ..+..+++.+..++.+++-.+.....-+.+.+.++-. .+|++|+
T Consensus 183 s~~al~~a~~la~~~~---~~l~ll~v~~~~~--~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dLlV~ 257 (294)
T 3loq_A 183 ADRALEYAKFVVKKTG---GELHIIHVSEDGD--KTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINATTIFM 257 (294)
T ss_dssp HHHHHHHHHHHHHHHT---CEEEEEEECSSSC--CHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhhhcC---CEEEEEEEccCch--HHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCcCEEEE
Confidence 4455665555655531 2456665554322 4566778888888888764444443344677777776 6899988
Q ss_pred cCCCCCC-Ch----HHHHHH--HhCCceEeeC
Q 016535 362 SMIDEHF-GI----SVVEYM--AAGAIPIGKH 386 (388)
Q Consensus 362 ps~~E~~-~~----~vlEAm--a~G~PVI~~~ 386 (388)
.+...+. .- ++.|.+ .+.+||+.-.
T Consensus 258 G~~~~~~~~~~~~Gs~~~~vl~~~~~pvLvv~ 289 (294)
T 3loq_A 258 GSRGAGSVMTMILGSTSESVIRRSPVPVFVCK 289 (294)
T ss_dssp ECCCCSCHHHHHHHCHHHHHHHHCSSCEEEEC
T ss_pred eCCCCCCccceeeCcHHHHHHhcCCCCEEEEC
Confidence 8764432 11 123333 4577877643
No 312
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=21.15 E-value=1e+02 Score=26.61 Aligned_cols=36 Identities=11% Similarity=0.139 Sum_probs=27.2
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+.+.|+|+|+ |.+.+=..+++.|.+.| ++|+++..+
T Consensus 18 ~~~m~~I~iI--------G~G~mG~~~A~~l~~~G--~~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFL--------GLGIMGKAMSMNLLKNG--FKVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEE--------CCSHHHHHHHHHHHHTT--CEEEEECSS
T ss_pred cccCCEEEEE--------CccHHHHHHHHHHHHCC--CeEEEEeCC
Confidence 4455789998 45566678899999999 788887544
No 313
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=21.06 E-value=4e+02 Score=22.98 Aligned_cols=100 Identities=11% Similarity=-0.023 Sum_probs=61.0
Q ss_pred CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC--C--------cc-HHHHHHHHHHHHhcCCCCcEEEccCCCHHHH
Q 016535 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN--K--------SD-EERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (388)
Q Consensus 281 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~--~--------~~-~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l 349 (388)
-.+.+.+++.++.+++.... -.+.+++-+.... + .. .+-++.+++..++.|++ .+....+.+++
T Consensus 51 ies~e~~~~~A~~lk~~~~~--~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~GLp---v~Tev~D~~~v 125 (298)
T 3fs2_A 51 METRDHAFEMAGRLKEMTDK--LGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYGFP---VLTDIHTEEQC 125 (298)
T ss_dssp CCCHHHHHHHHHHHHHHHHH--HTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHCCC---EEEECCSHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH--cCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCe---EEEEeCCHHHH
Confidence 34677788877777654211 1244444432211 0 01 35567788888999987 33444555666
Q ss_pred HHHHHhCcEEEEcCC-CCCCChHHHHHHHhCCceEeeC
Q 016535 350 VKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 350 ~~~~~~adv~v~ps~-~E~~~~~vlEAma~G~PVI~~~ 386 (388)
..+-.-+|++-.+|. ..+++ -+-|+-..|+||+-++
T Consensus 126 ~~l~~~vd~lkIgA~~~~n~~-LLr~va~~gkPVilK~ 162 (298)
T 3fs2_A 126 AAVAPVVDVLQIPAFLCRQTD-LLIAAARTGRVVNVKK 162 (298)
T ss_dssp HHHTTTCSEEEECGGGTTCHH-HHHHHHHTTSEEEEEC
T ss_pred HHHHhhCCEEEECccccCCHH-HHHHHHccCCcEEEeC
Confidence 655566999888884 34555 3456678999999875
No 314
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=20.98 E-value=1.5e+02 Score=23.29 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=22.0
Q ss_pred ChhhHHHHHHHHHhhcCCCceEEEEecCC
Q 016535 49 GGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (388)
Q Consensus 49 G~~~~~~~l~~~L~~~g~~~~v~v~~~~~ 77 (388)
|--.+..+|+..|.++| .+|.++-.++
T Consensus 14 GKTt~a~~la~~la~~g--~~vlliD~D~ 40 (206)
T 4dzz_A 14 GKTTAVINIATALSRSG--YNIAVVDTDP 40 (206)
T ss_dssp SHHHHHHHHHHHHHHTT--CCEEEEECCT
T ss_pred cHHHHHHHHHHHHHHCC--CeEEEEECCC
Confidence 55667789999999999 7888887664
No 315
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=20.79 E-value=1.4e+02 Score=24.99 Aligned_cols=46 Identities=4% Similarity=-0.083 Sum_probs=28.7
Q ss_pred HHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCC
Q 016535 323 QSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHF 368 (388)
Q Consensus 323 ~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~ 368 (388)
.+..+.++++|..-.|.+.+..|-+.+.+++...|.++.=|..-||
T Consensus 124 ~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGf 169 (246)
T 3inp_A 124 DRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGF 169 (246)
T ss_dssp HHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC
T ss_pred HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCC
Confidence 3556666777776667666666667777777777755443433333
No 316
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=20.73 E-value=98 Score=25.94 Aligned_cols=44 Identities=11% Similarity=0.081 Sum_probs=27.3
Q ss_pred ccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
|+++..+|+++.|..... -...++..+-+++.+.| +++.+....
T Consensus 3 ~~~~~~~Ig~i~~~~~~~-~~~~~~~gi~~~~~~~g--~~~~~~~~~ 46 (289)
T 1dbq_A 3 KVNHTKSIGLLATSSEAA-YFAEIIEAVEKNCFQKG--YTLILGNAW 46 (289)
T ss_dssp -----CEEEEEESCTTSH-HHHHHHHHHHHHHHHHT--CEEEEEECT
T ss_pred CCCCCCEEEEEeCCCCCh-HHHHHHHHHHHHHHHcC--CeEEEEcCC
Confidence 456677899999887433 34456666777888889 777765543
No 317
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=20.71 E-value=1.5e+02 Score=25.71 Aligned_cols=32 Identities=6% Similarity=-0.220 Sum_probs=22.7
Q ss_pred HhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 354 GGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 354 ~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
...|+++.++....-.-.+.+|+.+|++|++-
T Consensus 72 ~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~E 103 (318)
T 3oa2_A 72 TALDYVSICSPNYLHYPHIAAGLRLGCDVICE 103 (318)
T ss_dssp TSCCEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCCcEEEECCCcHHHHHHHHHHHHCCCeEEEE
Confidence 45787777665543334478999999999874
No 318
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=20.67 E-value=2.1e+02 Score=27.52 Aligned_cols=38 Identities=16% Similarity=0.099 Sum_probs=31.2
Q ss_pred HHHHHHHh--CcEEEEcCC-CCCCChHHHHHHHh--CCceEee
Q 016535 348 DLVKLLGG--AVVGIHSMI-DEHFGISVVEYMAA--GAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~~--adv~v~ps~-~E~~~~~vlEAma~--G~PVI~~ 385 (388)
++.+.++. +|++|-.|. ...|.--++++|+. -.|||-.
T Consensus 389 ~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFa 431 (605)
T 1o0s_A 389 SILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFA 431 (605)
T ss_dssp CHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEE
T ss_pred CHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEE
Confidence 58888886 999999986 56788889999994 7787754
No 319
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=20.61 E-value=1.2e+02 Score=24.20 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=24.0
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
|+|+++ ||.+.+-..+++.|.+.| ++|+++...
T Consensus 1 m~i~ii-------Ga~G~~G~~ia~~l~~~g--~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALL-------GGTGNLGKGLALRLATLG--HEIVVGSRR 33 (212)
T ss_dssp CEEEEE-------TTTSHHHHHHHHHHHTTT--CEEEEEESS
T ss_pred CeEEEE-------cCCCHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 456665 446677778899999999 788777543
No 320
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=20.53 E-value=4.7e+02 Score=23.50 Aligned_cols=76 Identities=8% Similarity=0.076 Sum_probs=41.7
Q ss_pred CCc--EEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEE--ccCCCHHHHHHHHHh--CcEEEEcCCCCCCChHHHHHH
Q 016535 303 PRP--RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF--YKNLLYRDLVKLLGG--AVVGIHSMIDEHFGISVVEYM 376 (388)
Q Consensus 303 ~~~--~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~--~g~v~~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAm 376 (388)
+++ .+.+++. +.+..+++.+.....+ ..++.. ..--+.+++.++++. +|+++...-...-...+-.++
T Consensus 24 g~~~~~V~v~~r-----~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l 97 (405)
T 4ina_A 24 REVFSHITLASR-----TLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQIVLNIALPYQDLTIMEACL 97 (405)
T ss_dssp TTTCCEEEEEES-----CHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHH
T ss_pred CCCceEEEEEEC-----CHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHH
Confidence 454 7777775 4443334433332211 012322 233346788899988 899887653211112345667
Q ss_pred HhCCceEe
Q 016535 377 AAGAIPIG 384 (388)
Q Consensus 377 a~G~PVI~ 384 (388)
.+|+.++-
T Consensus 98 ~~g~~vvD 105 (405)
T 4ina_A 98 RTGVPYLD 105 (405)
T ss_dssp HHTCCEEE
T ss_pred HhCCCEEE
Confidence 88999883
No 321
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=20.49 E-value=12 Score=31.75 Aligned_cols=30 Identities=13% Similarity=0.029 Sum_probs=14.5
Q ss_pred hCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 355 GAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 355 ~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+|++|-.+..+.. ...++ +..|+|+|+..
T Consensus 54 ~~DVvIDft~p~a~-~~~~~-l~~g~~vVigT 83 (243)
T 3qy9_A 54 GADVAIDFSNPNLL-FPLLD-EDFHLPLVVAT 83 (243)
T ss_dssp TCSEEEECSCHHHH-HHHHT-SCCCCCEEECC
T ss_pred CCCEEEEeCChHHH-HHHHH-HhcCCceEeCC
Confidence 67776644433221 12233 55666666543
No 322
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=20.47 E-value=3.7e+02 Score=22.29 Aligned_cols=81 Identities=6% Similarity=-0.061 Sum_probs=0.0
Q ss_pred EEEeCC-CCCccHHHHHHHHHHHHhc-CCCCcEEEc--cCCCHHHHHHHHHh-----Cc-EEEEcCCCCCCChHHHHHHH
Q 016535 308 QFVGSC-RNKSDEERLQSLKDKSIEL-KVDGNVEFY--KNLLYRDLVKLLGG-----AV-VGIHSMIDEHFGISVVEYMA 377 (388)
Q Consensus 308 ~ivG~~-~~~~~~~~~~~l~~~~~~~-~l~~~V~~~--g~v~~~~l~~~~~~-----ad-v~v~ps~~E~~~~~vlEAma 377 (388)
+++... ......+..+.+++.++++ +..-.+... ..-+.++..+.+.. .| +++.|...+...-.+-++..
T Consensus 13 vi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~ 92 (304)
T 3gbv_A 13 CLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNE 92 (304)
T ss_dssp EEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHH
T ss_pred EEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHHHHH
Q ss_pred hCCceEeeCCC
Q 016535 378 AGAIPIGKHFK 388 (388)
Q Consensus 378 ~G~PVI~~~~~ 388 (388)
.|.|||.-+..
T Consensus 93 ~~iPvV~~~~~ 103 (304)
T 3gbv_A 93 LGIPYIYIDSQ 103 (304)
T ss_dssp HTCCEEEESSC
T ss_pred CCCeEEEEeCC
No 323
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=20.47 E-value=2.5e+02 Score=20.24 Aligned_cols=63 Identities=11% Similarity=-0.047 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhcCCCC---cEEE-ccCCCHHHHHHHHH--hCcEEEEcCCCCCCC----hHHHHH--HHhCCceEe
Q 016535 321 RLQSLKDKSIELKVDG---NVEF-YKNLLYRDLVKLLG--GAVVGIHSMIDEHFG----ISVVEY--MAAGAIPIG 384 (388)
Q Consensus 321 ~~~~l~~~~~~~~l~~---~V~~-~g~v~~~~l~~~~~--~adv~v~ps~~E~~~----~~vlEA--ma~G~PVI~ 384 (388)
..+.+++.+++.+.+. .... .| -+.+++.++-. .+|++|+.+...++. -++.|. ..+.+||+.
T Consensus 67 ~~~~l~~~~~~~~~~~~~v~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~~pVlv 141 (143)
T 3fdx_A 67 SETQLKEIAKKFSIPEDRMHFHVAEG-SPKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAECSVLV 141 (143)
T ss_dssp HHHHHHHHHTTSCCCGGGEEEEEEES-CHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCSSEEEE
T ss_pred HHHHHHHHHHHcCCCCCceEEEEEec-ChHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhCCCCEEE
Confidence 4556777777777653 2223 35 45778888777 699999887632221 123343 356788875
No 324
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=20.37 E-value=3.5e+02 Score=22.01 Aligned_cols=27 Identities=7% Similarity=-0.367 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCcEEE--EcCCCCCCChHH
Q 016535 346 YRDLVKLLGGAVVGI--HSMIDEHFGISV 372 (388)
Q Consensus 346 ~~~l~~~~~~adv~v--~ps~~E~~~~~v 372 (388)
-++..+.+..||.+| .|.++-++|-.+
T Consensus 74 v~~~~~~l~~aD~iv~~~P~y~~~~p~~l 102 (218)
T 3rpe_A 74 IESEIENYLWADTIIYQMPAWWMGEPWIL 102 (218)
T ss_dssp HHHHHHHHHHCSEEEEEEECBTTBCCHHH
T ss_pred HHHHHHHHHhCCEEEEECChHhccCCHHH
Confidence 466778899999555 566777777653
No 325
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=20.21 E-value=2.1e+02 Score=22.50 Aligned_cols=61 Identities=15% Similarity=0.080 Sum_probs=35.0
Q ss_pred HHHHHHHHhcCCCCcEEEccC-CCHHHHHHHHHhCc---EEEEcCC--C--CCCChHHHHHHHhCCceEee
Q 016535 323 QSLKDKSIELKVDGNVEFYKN-LLYRDLVKLLGGAV---VGIHSMI--D--EHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 323 ~~l~~~~~~~~l~~~V~~~g~-v~~~~l~~~~~~ad---v~v~ps~--~--E~~~~~vlEAma~G~PVI~~ 385 (388)
..+.+..+++|.. +..... .+.+++.+.+...+ +++.|.- . .++-..+++++..|+|+++.
T Consensus 14 ~~i~~~l~~~G~~--~~v~~~~~~~~~i~~~l~~~~~~~iil~gGpg~~~~~~~~~~l~~~~~~~~PilGI 82 (192)
T 1i1q_B 14 WNLADQLRTNGHN--VVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGI 82 (192)
T ss_dssp HHHHHHHHHTTCE--EEEEETTSCSHHHHHHHTTCSSEEEEECCCSSCGGGSTTHHHHHHHHBTTBCEEEE
T ss_pred HHHHHHHHHCCCe--EEEEECCCCHHHHHHHhhhccCCeEEECCCCcCchhCchHHHHHHHHhcCCCEEEE
Confidence 4556666677754 444332 33356666655433 6666532 1 23334578888889999863
No 326
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=20.19 E-value=1.1e+02 Score=26.92 Aligned_cols=38 Identities=11% Similarity=-0.064 Sum_probs=25.4
Q ss_pred HHHHHHHh---CcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 348 DLVKLLGG---AVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~~---adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++.+++.. .|+++.++....-.-.+.+|+.+|++|++-
T Consensus 71 ~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~E 111 (330)
T 4ew6_A 71 TIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALVAGKHVFLE 111 (330)
T ss_dssp SHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEe
Confidence 44445554 888777765433333468899999999874
No 327
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=20.19 E-value=1e+02 Score=27.04 Aligned_cols=44 Identities=11% Similarity=0.112 Sum_probs=29.3
Q ss_pred ccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
++++...|+++.|..... --..++..+-+++.+.| +++.+....
T Consensus 66 ~~~~~~~Igvi~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 109 (355)
T 3e3m_A 66 TTKRSGFVGLLLPSLNNL-HFAQTAQSLTDVLEQGG--LQLLLGYTA 109 (355)
T ss_dssp -----CEEEEEESCSBCH-HHHHHHHHHHHHHHHTT--CEEEEEECT
T ss_pred hcCCCCEEEEEeCCCCch-HHHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 456677899999987544 45566777888888999 777776554
No 328
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=20.09 E-value=83 Score=25.16 Aligned_cols=37 Identities=14% Similarity=0.046 Sum_probs=26.1
Q ss_pred cceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEe
Q 016535 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYT 74 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~ 74 (388)
.++|.++ |....|.+++++..+++.|.+.| +++.++.
T Consensus 21 ~~kv~Iv--Y~S~tGnTe~~A~~ia~~l~~~g--~~v~v~~ 57 (191)
T 1bvy_F 21 NTPLLVL--YGSNMGTAEGTARDLADIAMSKG--FAPQVAT 57 (191)
T ss_dssp CCCEEEE--EECSSSHHHHHHHHHHHHHHTTT--CCCEEEE
T ss_pred CCeEEEE--EECCChHHHHHHHHHHHHHHhCC--CceEEee
Confidence 4555555 34445799999999999999999 4555543
No 329
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=20.08 E-value=1.2e+02 Score=25.23 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=25.8
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecC
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~ 76 (388)
+-..++|+|+ |.+.+=..+++.|.+.| ++|+++..+
T Consensus 16 ~~~~~kIgiI--------G~G~mG~alA~~L~~~G--~~V~~~~r~ 51 (245)
T 3dtt_A 16 YFQGMKIAVL--------GTGTVGRTMAGALADLG--HEVTIGTRD 51 (245)
T ss_dssp ---CCEEEEE--------CCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred ccCCCeEEEE--------CCCHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 4567889988 45566677899999999 788887544
No 330
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=20.00 E-value=1.4e+02 Score=26.58 Aligned_cols=75 Identities=11% Similarity=-0.087 Sum_probs=47.9
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
...+.|+|-+ ..=...++.++..+ .+.+.++|......+.+..+..++.+++.|. .+.+.- +
T Consensus 153 glkva~vGD~--~rva~Sl~~~~~~~---------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~--~v~~~~-----d 214 (355)
T 4a8p_A 153 DCKVVFVGDA--TQVCFSLGLITTKM---------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGG--SFLVTD-----D 214 (355)
T ss_dssp GCEEEEESCC--CHHHHHHHHHHHHT---------TCEEEEECCTTSSCCHHHHHHHHHHHHHHSC--EEEEEC-----C
T ss_pred CCEEEEECCC--chhHHHHHHHHHHc---------CCEEEEECCCccCCCHHHHHHHHHHHHHcCC--eEEEEC-----C
Confidence 3678999976 11134455555544 7899999986555555666666666676663 355443 3
Q ss_pred HHHHHHhCcEEEEc
Q 016535 349 LVKLLGGAVVGIHS 362 (388)
Q Consensus 349 l~~~~~~adv~v~p 362 (388)
+. .++.||++..-
T Consensus 215 ~~-av~~aDVVytd 227 (355)
T 4a8p_A 215 AS-SVEGADFLYTD 227 (355)
T ss_dssp GG-GGTTCSEEEEC
T ss_pred HH-HHcCCCEEEec
Confidence 34 68999987753
Done!