Query 016536
Match_columns 387
No_of_seqs 241 out of 1676
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 07:44:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016536.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016536hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02845 Branched-chain-amino- 100.0 7.8E-69 1.7E-73 531.1 37.8 328 57-387 5-335 (336)
2 PRK12479 branched-chain amino 100.0 2.5E-59 5.4E-64 456.8 33.1 278 96-379 6-289 (299)
3 TIGR01122 ilvE_I branched-chai 100.0 1.8E-58 4E-63 450.3 33.1 274 97-377 1-286 (298)
4 PRK08320 branched-chain amino 100.0 2.5E-58 5.3E-63 447.3 33.1 275 95-375 4-284 (288)
5 cd01558 D-AAT_like D-Alanine a 100.0 2.4E-58 5.3E-63 443.0 31.1 266 97-370 1-270 (270)
6 PRK06680 D-amino acid aminotra 100.0 5.7E-58 1.2E-62 444.5 32.9 273 96-376 5-283 (286)
7 PRK06606 branched-chain amino 100.0 2.9E-57 6.2E-62 443.6 33.2 273 96-375 9-293 (306)
8 PRK13356 aminotransferase; Pro 100.0 6.6E-57 1.4E-61 437.1 33.4 273 95-378 8-286 (286)
9 PRK12400 D-amino acid aminotra 100.0 5.1E-57 1.1E-61 438.7 32.6 271 96-375 7-283 (290)
10 PRK07650 4-amino-4-deoxychoris 100.0 5.1E-57 1.1E-61 437.1 32.1 274 96-376 2-277 (283)
11 TIGR01121 D_amino_aminoT D-ami 100.0 1.3E-56 2.8E-61 433.0 32.6 269 96-373 2-274 (276)
12 PRK07544 branched-chain amino 100.0 3.1E-56 6.8E-61 433.5 31.1 270 96-375 11-287 (292)
13 PLN02782 Branched-chain amino 100.0 1.3E-55 2.8E-60 444.7 31.6 279 97-385 96-402 (403)
14 PRK07849 4-amino-4-deoxychoris 100.0 5.2E-55 1.1E-59 425.1 33.2 265 95-376 8-290 (292)
15 PRK06092 4-amino-4-deoxychoris 100.0 9.8E-55 2.1E-59 417.9 31.9 260 96-371 2-266 (268)
16 cd00449 PLPDE_IV PyridoxaL 5'- 100.0 1.8E-54 4E-59 412.2 31.4 251 114-370 1-256 (256)
17 cd01559 ADCL_like ADCL_like: 4 100.0 9.8E-55 2.1E-59 413.6 29.2 247 114-370 1-249 (249)
18 PLN03117 Branched-chain-amino- 100.0 1.8E-54 4E-59 431.4 32.1 279 96-385 45-350 (355)
19 TIGR03461 pabC_Proteo aminodeo 100.0 3E-54 6.4E-59 412.9 31.7 255 97-367 1-260 (261)
20 TIGR01123 ilvE_II branched-cha 100.0 2.9E-54 6.2E-59 423.7 31.3 279 97-385 1-313 (313)
21 cd01557 BCAT_beta_family BCAT_ 100.0 5.3E-54 1.2E-58 415.4 31.6 255 110-373 2-276 (279)
22 PRK13357 branched-chain amino 100.0 2.6E-53 5.7E-58 423.5 31.4 279 97-385 42-355 (356)
23 PLN02259 branched-chain-amino- 100.0 2.9E-53 6.2E-58 425.8 30.5 278 96-385 81-387 (388)
24 PLN02883 Branched-chain amino 100.0 1.1E-52 2.5E-57 420.6 29.3 285 75-386 71-384 (384)
25 PRK09266 hypothetical protein; 100.0 3.4E-52 7.4E-57 400.0 30.4 258 93-371 2-259 (266)
26 COG0115 IlvE Branched-chain am 100.0 1.8E-50 4E-55 391.7 32.5 272 96-378 4-283 (284)
27 KOG0975 Branched chain aminotr 100.0 6.9E-51 1.5E-55 394.4 22.7 281 72-379 60-371 (379)
28 PF01063 Aminotran_4: Aminotra 100.0 3.5E-42 7.6E-47 322.3 20.2 224 135-370 1-231 (231)
29 PRK07546 hypothetical protein; 100.0 6.3E-40 1.4E-44 304.6 25.9 202 121-349 4-209 (209)
30 PRK07101 hypothetical protein; 100.0 2.5E-32 5.5E-37 249.5 20.6 183 121-343 3-187 (187)
No 1
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein
Probab=100.00 E-value=7.8e-69 Score=531.14 Aligned_cols=328 Identities=66% Similarity=1.080 Sum_probs=297.9
Q ss_pred cCCCCCCCCCccCHHHHHHHHhhCCCCccccchhhhhceeeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecC
Q 016536 57 DSSAQLSDVPLLSCSEAIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYE 136 (387)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~y~~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ 136 (387)
..++++.-.|++++++++++++. +|.+|+.+++.|||++|+||++++++++.||++||||+||||+|||+++++|++|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~nG~~v~~~~a~i~~~Drgl~~GdGvFETirv~~G~~~~ 83 (336)
T PLN02845 5 VPGSRTKVPPLLSAAEMIQRLQS-KWSDAKKQNFGAMYSSVVGGITTDPAAMVIPLDDHMVHRGHGVFDTATIRDGHLYE 83 (336)
T ss_pred CCCCCCcCCccccHHHHHHHHHh-hhccccccceeeeeeEEECCEEccHHHCcccccccceeecceEEEEEEEECCEEcC
Confidence 45667777889999999999999 78888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCC-C
Q 016536 137 LDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF-V 215 (387)
Q Consensus 137 ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~-~ 215 (387)
|++|++||.+||++|+|+.|++.++++++|.+++++++..+++||+++++|.|++++.+..++.+.+++.+.+.++.. .
T Consensus 84 le~Hl~RL~~Sa~~L~i~~p~~~~~l~~~i~~~i~~~~~~~~~irl~vtrG~g~~~~~~~~~~~~~~~i~~~~~~~~~~~ 163 (336)
T PLN02845 84 LDAHLDRFLRSAAKAKIPLPFDRATLRRILLQTVAASGCRNGSLRYWLSAGPGGFSLSPSGCSEPAFYAVVIEDTYAQDR 163 (336)
T ss_pred HHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHhcCCCcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEccccccccc
Confidence 999999999999999998889999999999999999888889999999999887777666666777777765544333 2
Q ss_pred CCCeEEEEeeeecCCCCCCCccccCChhhHHHHHHHHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCCCccc
Q 016536 216 SKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFDKILS 295 (387)
Q Consensus 216 ~~Gv~l~~s~~~~~~p~~~~iKt~NYl~~~la~~eA~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~~iLp 295 (387)
..|+++.++++++.++.++++|++||+.+++++++|+++|+||+||+|++|+|+|++++||||+.++++|+||++++||+
T Consensus 164 ~~gv~l~~~~~~~~~~~~~~~Kt~nyl~~vla~~eA~~~G~deaLlln~~G~V~Egt~sNiF~v~~~~~l~TP~l~~iL~ 243 (336)
T PLN02845 164 PEGVKVVTSSVPIKPPQFATVKSVNYLPNALSQMEAEERGAFAGIWLDEEGFVAEGPNMNVAFLTNDGELVLPPFDKILS 243 (336)
T ss_pred cCCeEEEEeeeeecCCccccchhhhhHHHHHHHHHHHHcCCCEEEEECCCCcEEEcCcceEEEEEECCEEEeCCCCCcCc
Confidence 57999988887776666789999999999999999999999999999999999999999997766799999999988999
Q ss_pred cHHHHHHHHHHHHhhhCC--ccceEEEEEecHHhHhcccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHH
Q 016536 296 GCTAKRVLTLAKALVREG--KLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILED 373 (387)
Q Consensus 296 GiTR~~vLela~~~~~~G--~~~~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~ 373 (387)
||||+.|+++|+++.+.| + +|+|+.|+++||.+|||+|+|||++||+||.+||++.+++|++||++++|++.|++.
T Consensus 244 GItR~~vlela~~~~~~G~~i--~V~E~~i~~~eL~~AdEvFltnS~~gv~PV~~id~~~~~~g~~gp~t~~L~~~~~~~ 321 (336)
T PLN02845 244 GCTARRVLELAPRLVSPGDLR--GVKQRKISVEEAKAADEMMLIGSGVPVLPIVSWDGQPIGDGKVGPITLALHDLLLDD 321 (336)
T ss_pred cHHHHHHHHHHHhhhccCCce--EEEEEecCHHHHhcCCEEEEecCcccEEEEEEECCEECCCCCCCHHHHHHHHHHHHH
Confidence 999999999999763336 6 899999999999999999999999999999999999999889999999999999977
Q ss_pred hhcCCCCcccccCC
Q 016536 374 MQSGPPTVRVAVPY 387 (387)
Q Consensus 374 i~~g~~~~~~~v~~ 387 (387)
...++.++++|++|
T Consensus 322 ~~~~~~~~~~~~~~ 335 (336)
T PLN02845 322 MRSGPPGVRTPVPY 335 (336)
T ss_pred HhcCCCccceeccC
Confidence 77777788999998
No 2
>PRK12479 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.5e-59 Score=456.78 Aligned_cols=278 Identities=27% Similarity=0.429 Sum_probs=252.1
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCC
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 175 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~ 175 (387)
.|+||.++++..+.+|++||||+|||||||||++++|++|+|++|++||.+||++++|++|++.+++++++.++++.++.
T Consensus 6 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i~~~~~ 85 (299)
T PRK12479 6 IYMNGEFVEKEKAVVSVYDHGFLYGDGVFEGIRSYGGNVFCLKEHVKRLYESAKSILLTIPLTVDEMEEAVLQTLQKNEY 85 (299)
T ss_pred EEECCEEeEHHHCccccccchhheeeeEEEEEEEECCEecCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 68899999999999999999999999999999999999999999999999999999999899999999999999999888
Q ss_pred CCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCC---CCCCeEEEEeeeecCCC-CC-CCccccCChhhHHHHHH
Q 016536 176 RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF---VSKGVKVITSSIPIKPP-QF-GTVKSVNYLPNVLSKME 250 (387)
Q Consensus 176 ~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~---~~~Gv~l~~s~~~~~~p-~~-~~iKt~NYl~~~la~~e 250 (387)
.+++||+++++|.|.+++.+..+..+.+++++.+.+..+ +.+|+++.++.+++..+ .+ +.+|+.||+.+++++++
T Consensus 86 ~~~~ir~~v~rg~g~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~~~~r~~~~~~~~~~K~~nyl~~vla~~e 165 (299)
T PRK12479 86 ADAYIRLIVSRGKGDLGLDPRSCVKPSVIIIAEQLKLFPQEFYDNGLSVVSVASRRNTPDALDPRIKSMNYLNNVLVKIE 165 (299)
T ss_pred CCeEEEEEEEecCCCCCCCCccCCCceEEEEEEEcccCChhHHhCCeEEEEEeEeccCCCccCccchhhhhHHHHHHHHH
Confidence 889999999999888888776666778887777654322 36799988887776533 33 68999999999999999
Q ss_pred HHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHh
Q 016536 251 AEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGK 329 (387)
Q Consensus 251 A~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~ 329 (387)
|+++|+||+||+|++|+|+|++++|| |++++++|+||+++ ++|+||||+.++++|+++ |+ +|+|+.|+++||.
T Consensus 166 a~~~g~de~l~ld~~g~v~E~s~sNl-f~v~~~~l~TP~l~~giL~GItR~~il~~~~~~---g~--~v~e~~i~~~~L~ 239 (299)
T PRK12479 166 AAQAGVLEALMLNQQGYVCEGSGDNV-FVVKDGKVLTPPSYLGALEGITRNSVIELCERL---SI--PCEERPFTRHDVY 239 (299)
T ss_pred HHHcCCCEEEEEcCCCcEEECCceEE-EEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHc---CC--eEEEEeCCHHHHH
Confidence 99999999999999999999999999 55689999999995 799999999999999998 98 9999999999999
Q ss_pred cccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhhcCCC
Q 016536 330 KAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQSGPP 379 (387)
Q Consensus 330 ~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~~g~~ 379 (387)
+|||+|+|||+.||+||.+||++.+++|++||++++|+++|++.+...+.
T Consensus 240 ~adevfltnS~~gi~PV~~id~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 289 (299)
T PRK12479 240 VADEVFLTGTAAELIPVVKVDSREIGDGKPGSVTKQLTEEFKKLTRERGV 289 (299)
T ss_pred hCCeeeeecCcccEEEEEEECCEEcCCCCcCHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999889999999999999866665443
No 3
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family more strongly similar to the DAAT family.
Probab=100.00 E-value=1.8e-58 Score=450.30 Aligned_cols=274 Identities=29% Similarity=0.469 Sum_probs=247.2
Q ss_pred eeCCeecCCCCcccCCCccccccccceeEEEEEeCC----eecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHh
Q 016536 97 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDG----YLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSA 172 (387)
Q Consensus 97 ~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G----~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a 172 (387)
|+||.+++.+.+.++++||||+||||+|||+++++| ++|+|++|++||.+||++++|+.|++.++|+++|.+++++
T Consensus 1 ~~ng~~v~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~~ 80 (298)
T TIGR01122 1 WMDGEFVDWEDAKVHVLTHALHYGTGVFEGIRAYDTDKGPAIFRLKEHIQRLYDSAKIYRMEIPYSKEELMEATRETLRK 80 (298)
T ss_pred CcCCEEEEhhhcccChhhhhhhccceEEEEEEEEcCCCcceeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 679999999999999999999999999999999999 9999999999999999999998889999999999999999
Q ss_pred cCCCCceEEEEEEccCCceeecCCCCCCceEEEEEEecCC--C--CCCCCeEEEEeeeecCCC-C-CCCccccC-ChhhH
Q 016536 173 SNCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDS--P--FVSKGVKVITSSIPIKPP-Q-FGTVKSVN-YLPNV 245 (387)
Q Consensus 173 ~~~~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~--~--~~~~Gv~l~~s~~~~~~p-~-~~~iKt~N-Yl~~~ 245 (387)
++..+++||++|++|.+.+++.+.....+.+++.+.+.+. . ...+|+++.++++++..+ . .+++|+.| |+.++
T Consensus 81 ~~~~~~~ir~~v~rg~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~r~~~~~~~~~~K~~~~yl~~v 160 (298)
T TIGR01122 81 NNLRSAYIRPLVFRGDGDLGLNPRAGYKPDVIIAAWPWGAYLGEEALEKGIDAKVSSWRRNAPNTIPTAAKAGGNYLNSL 160 (298)
T ss_pred cCCCCEEEEEEEEEccCCCCcCCCCCCCceEEEEEeccccccCcccccCCeEEEEEEEEcCCCCCcCccchhhhhhHHHH
Confidence 9888999999999998887776644445677776665432 1 135799999888877533 2 47899996 99999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEec
Q 016536 246 LSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVT 324 (387)
Q Consensus 246 la~~eA~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~ 324 (387)
++.++|+++|+||+||+|++|+|+|++++|| |++++|+|+||+++ +||+||||+.|+++|+++ |+ +|+|+.|+
T Consensus 161 ~a~~~a~~~g~de~l~ld~~g~v~E~s~sNl-f~v~~~~l~TP~~~~~~L~GItR~~il~la~~~---g~--~v~e~~i~ 234 (298)
T TIGR01122 161 LAKSEARRHGYDEAILLDVEGYVAEGSGENI-FIVKDGVLFTPPVTSSILPGITRDTVITLAKEL---GI--EVVEQPIS 234 (298)
T ss_pred HHHHHHHHcCCCEEEEECCCCCEEECCceEE-EEEECCEEECCCCCCCcCcchHHHHHHHHHHHc---CC--cEEEEeCC
Confidence 9999999999999999999999999999999 55689999999985 799999999999999998 98 99999999
Q ss_pred HHhHhcccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhhcC
Q 016536 325 VEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQSG 377 (387)
Q Consensus 325 ~~eL~~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~~g 377 (387)
++||.+|||+|+|||+.+|+||.+||++.+++|++||++++|++.|. +++.+
T Consensus 235 ~~eL~~adevfltns~~gv~PV~~id~~~~~~~~~g~~~~~l~~~~~-~~~~~ 286 (298)
T TIGR01122 235 REELYTADEAFFTGTAAEITPIREVDGRKIGNGRRGPVTKKLQEAFF-DLVTG 286 (298)
T ss_pred HHHHhhCCEEEEcCCcceEEEEEEECCEECCCCCCChHHHHHHHHHH-HHHcC
Confidence 99999999999999999999999999999998899999999999998 55554
No 4
>PRK08320 branched-chain amino acid aminotransferase; Reviewed
Probab=100.00 E-value=2.5e-58 Score=447.29 Aligned_cols=275 Identities=33% Similarity=0.506 Sum_probs=248.6
Q ss_pred eeeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcC
Q 016536 95 SSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASN 174 (387)
Q Consensus 95 ~~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~ 174 (387)
..|+||.+++...+.++++||||+||||||||+++++|++++|++|++||.+||++|+|++|++.+.++++|.+++++++
T Consensus 4 ~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~~v~~g~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i~~~~ 83 (288)
T PRK08320 4 LIYLNGEFVPKEEAKVSVFDHGFLYGDGVFEGIRAYNGRVFRLKEHIDRLYDSAKAIMLEIPLSKEEMTEIVLETLRKNN 83 (288)
T ss_pred EEEECCEEEEHHHCcccccchhhhhcceEEEEEEEECCEeecHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999999999999999999999999999999889999999999999999988
Q ss_pred CCCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCC---CCCCeEEEEeeeecCCC--CCCCccccCChhhHHHHH
Q 016536 175 CRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF---VSKGVKVITSSIPIKPP--QFGTVKSVNYLPNVLSKM 249 (387)
Q Consensus 175 ~~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~---~~~Gv~l~~s~~~~~~p--~~~~iKt~NYl~~~la~~ 249 (387)
..+++||+++++|.|.+++.|.+++.+.+++++.+.+... +.+|+++.++.+.+..+ ..+++|+.||+.++++++
T Consensus 84 ~~~~~iri~v~rg~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~K~~nyl~~v~a~~ 163 (288)
T PRK08320 84 LRDAYIRLVVSRGVGDLGLDPRKCPKPTVVCIAEPIGLYPGELYEKGLKVITVSTRRNRPDALSPQVKSLNYLNNILAKI 163 (288)
T ss_pred CCCEEEEEEEEECCCcCCCCcccCCCceEEEEEEEcCcCChhHHhcCeEEEEEeeeccCCCCcCccchhhhhHHHHHHHH
Confidence 8899999999999888888777666677766665533211 35799988887776533 336899999999999999
Q ss_pred HHHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhH
Q 016536 250 EAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEG 328 (387)
Q Consensus 250 eA~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL 328 (387)
+|+++|+||+||+|++|+|+|++++|| |++++|+|+||+++ ++|+||||+.++++|+++ |+ +|+|+.++++||
T Consensus 164 ~A~~~g~de~L~ld~~g~v~E~s~sNl-f~~~~~~l~TP~~~~~~L~GitR~~ll~~~~~~---g~--~v~e~~l~~~dL 237 (288)
T PRK08320 164 EANLAGVDEAIMLNDEGYVAEGTGDNI-FIVKNGKLITPPTYAGALEGITRNAVIEIAKEL---GI--PVREELFTLHDL 237 (288)
T ss_pred HHHHcCCCEEEEECCCCeEEEcCcEEE-EEEECCEEECCCCcCCCCcCHHHHHHHHHHHHc---CC--eEEEEECCHHHH
Confidence 999999999999999999999999999 55689999999994 799999999999999998 98 999999999999
Q ss_pred hcccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhh
Q 016536 329 KKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQ 375 (387)
Q Consensus 329 ~~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~ 375 (387)
.+|||+|+|||++||+||.+||++.+++|++||++++|++.|.+.+.
T Consensus 238 ~~ade~f~~ns~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~~~~~ 284 (288)
T PRK08320 238 YTADEVFLTGTAAEVIPVVKVDGRVIGDGKPGPITKKLLEEFRELTK 284 (288)
T ss_pred HhCCEEEEecChhhEEEEEEECCEECCCCCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888899999999999975443
No 5
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids. It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life.
Probab=100.00 E-value=2.4e-58 Score=442.98 Aligned_cols=266 Identities=33% Similarity=0.501 Sum_probs=240.9
Q ss_pred eeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCCC
Q 016536 97 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCR 176 (387)
Q Consensus 97 ~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~~ 176 (387)
|+||.+++++.+.+|++||+|+||||+|||||+++|++|+|++|++||.+||++|+|+.|++.+++++.+.++++.++..
T Consensus 1 ~~nG~~~~~~~~~i~~~d~g~~~G~gvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~~~~~~ 80 (270)
T cd01558 1 YLNGEYVPREEAKVSVFDRGFLFGDGVYEVIRVYNGKPFALDEHLDRLYRSAKELRIDIPYTREELKELIRELVAKNEGG 80 (270)
T ss_pred CcCCeEeEHHHCccccccchhcccceEEEEEEEECCEEecHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999999999999999999999999999999999999988899999999999999998888
Q ss_pred CceEEEEEEccCCceeecCCCCCCceEEEEEEecCCC---CCCCCeEEEEeeeecCCCCCCCccccCChhhHHHHHHHHH
Q 016536 177 KGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP---FVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKMEAEE 253 (387)
Q Consensus 177 ~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~---~~~~Gv~l~~s~~~~~~p~~~~iKt~NYl~~~la~~eA~~ 253 (387)
++.+|+.+++|.++.++.+..+..+.+++.+.+.+.. ...+|+++.+++.++. ..+++|+.||+.+++++++|++
T Consensus 81 ~~~~~~~~t~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~~~~~~--~~~~~K~~ny~~~~~a~~~a~~ 158 (270)
T cd01558 81 EGDVYIQVTRGVGPRGHDFPKCVKPTVVIITQPLPLPPAELLEKGVRVITVPDIRW--LRCDIKSLNLLNNVLAKQEAKE 158 (270)
T ss_pred CceEEEEEEeCCCccCCCCCCCCCCEEEEEEEecCCCChhhhhcCeEEEEeccccc--CCCCchhhccHHHHHHHHHHHH
Confidence 8999999999988777766555667777776655431 2357999888776543 3468999999999999999999
Q ss_pred cCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhccc
Q 016536 254 TGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAE 332 (387)
Q Consensus 254 ~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~ad 332 (387)
+|+||+||+|++|+|+|++++|| |++++|+|+||+++ ++|+||||+.++++|+++ |+ +|+|+.|+++||.+||
T Consensus 159 ~g~de~l~ld~~g~v~E~~~sNi-f~~~~~~l~TP~~~~~~L~GitR~~vl~~a~~~---g~--~v~e~~i~~~eL~~ad 232 (270)
T cd01558 159 AGADEAILLDADGLVTEGSSSNV-FIVKNGVLVTPPLDNGILPGITRATVIELAKEL---GI--PVEERPFSLEELYTAD 232 (270)
T ss_pred cCCCEEEEEcCCCEEEEcCcEEE-EEEECCEEECCCCcCCCCCChHHHHHHHHHHHc---CC--eEEEEeCCHHHHhhCC
Confidence 99999999999999999999999 55689999999985 899999999999999998 88 9999999999999999
Q ss_pred EEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHH
Q 016536 333 EMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLI 370 (387)
Q Consensus 333 EvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l 370 (387)
|+|+|||++||+||.+||++.+++++.||++++|++.|
T Consensus 233 e~fl~ns~~gv~PV~~i~~~~~~~~~~~~~~~~l~~~~ 270 (270)
T cd01558 233 EVFLTSTTAEVMPVVEIDGRPIGDGKPGPVTKRLREAY 270 (270)
T ss_pred EEEEecCcccEEEEEEECCeECCCCCCCHHHHHHHHhC
Confidence 99999999999999999999998888999999998764
No 6
>PRK06680 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=5.7e-58 Score=444.55 Aligned_cols=273 Identities=32% Similarity=0.432 Sum_probs=243.6
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCC
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 175 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~ 175 (387)
.|+||.+++.+.+.++++||||+||||||||+++++|++++|++|++||.+||+.|+|+.|++.+.++++|.+++++++.
T Consensus 5 ~~~nG~~~~~~~~~i~~~drg~~yGdGvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~~~~~~~ 84 (286)
T PRK06680 5 AYVNGRYVNHREARVHIEDRGFQFADGIYEVCAVRDGKLVDLDRHLARLFRSLGEIRIAPPMTRAELVEVLRELIRRNRV 84 (286)
T ss_pred EEECCEEEEHHHCcccccccccceeeEEEEEEEEECCEEechHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 78999999999999999999999999999999999999999999999999999999998889999999999999999988
Q ss_pred CCceEEEEEEccCCceeec-CCCCCCceEEEEEEecCC-C---CCCCCeEEEEeeeecCCCCCCCccccCChhhHHHHHH
Q 016536 176 RKGSLRYWLSAGVGDFQLS-PVGCHQSTFYVIVIQDDS-P---FVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKME 250 (387)
Q Consensus 176 ~~g~iR~~v~~G~g~~~~~-p~~~~~~~~~~~v~~~p~-~---~~~~Gv~l~~s~~~~~~p~~~~iKt~NYl~~~la~~e 250 (387)
.++++|+++++|.+..++. |..+..+.+++.+.+.+. . .+.+|+++.++...+ +..+++|+.||+.+++++++
T Consensus 85 ~~~~lr~~vtrG~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~~~~~~~~~--~~~~~~Ks~nyl~~vla~~e 162 (286)
T PRK06680 85 REGLVYLQVTRGVARRDHVFPAADVKPSVVVFAKSVDFARPAAAAETGIKVITVPDNR--WKRCDIKSVGLLPNVLAKQA 162 (286)
T ss_pred CceEEEEEEEeCCCCCCCCCCCCCCCcEEEEEEEeccccCChhHHhCCeEEEEecCCC--CCCCCcchhccHHHHHHHHH
Confidence 8999999999998765554 333456777777766543 1 135798887665432 34568999999999999999
Q ss_pred HHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHh
Q 016536 251 AEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGK 329 (387)
Q Consensus 251 A~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~ 329 (387)
|+++|+||+||+| +|+|+|++++||||+.++++|+||+++ +||+||||+.++++|+++ |+ +|+|+.|+++||.
T Consensus 163 A~~~g~dd~l~ld-~g~v~E~~~sN~f~~~~~~~l~TP~~~~~iL~Gitr~~il~~a~~~---g~--~v~e~~i~~~el~ 236 (286)
T PRK06680 163 AKEAGAQEAWMVD-DGFVTEGASSNAWIVTKDGKLVTRPADNFILPGITRHTLIDLAKEL---GL--EVEERPFTLQEAY 236 (286)
T ss_pred HHHCCCCEEEEec-CCEEEEcCcEEEEEEEECCEEEeCCCCCCCCcCHHHHHHHHHHHHc---CC--eEEEEcCCHHHHh
Confidence 9999999999999 999999999999555489999999985 799999999999999998 98 9999999999999
Q ss_pred cccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhhc
Q 016536 330 KAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQS 376 (387)
Q Consensus 330 ~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~~ 376 (387)
+|||+|+|||+.+|+||.+||++.++++++||++++|++.|.+.++.
T Consensus 237 ~ade~f~~ns~~gi~pV~~id~~~~~~~~~g~~~~~L~~~~~~~~~~ 283 (286)
T PRK06680 237 AAREAFITAASSFVFPVVQIDGKQIGNGKPGPIAKRLREAYEEFARL 283 (286)
T ss_pred cCcEEEEecCcccEEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888999999999999865553
No 7
>PRK06606 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=2.9e-57 Score=443.59 Aligned_cols=273 Identities=28% Similarity=0.438 Sum_probs=244.0
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEeCCe----ecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHH
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGY----LYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVS 171 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~----lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~ 171 (387)
.|+||.+++.+.+.++++||||+||||||||+++++|+ +|+|++|++||.+||++|+|+.|++.++|++.|.++++
T Consensus 9 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEtir~~~g~~~~~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~ 88 (306)
T PRK06606 9 IWFNGELVPWEDAKVHVLTHALHYGTGVFEGIRAYDTPKGPAIFRLREHTKRLFNSAKILRMEIPYSVDELMEAQREVVR 88 (306)
T ss_pred EEECCEEEEhHHcccChhhhhhhhcceeEEEEEEecCCCCCeeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999998 99999999999999999999888899999999999999
Q ss_pred hcCCCCceEEEEEEccCCceeecCCCCCCceEEEEEEecCC-C---CCCCCeEEEEeeeecCCC--CCCCccc-cCChhh
Q 016536 172 ASNCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDS-P---FVSKGVKVITSSIPIKPP--QFGTVKS-VNYLPN 244 (387)
Q Consensus 172 a~~~~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~-~---~~~~Gv~l~~s~~~~~~p--~~~~iKt-~NYl~~ 244 (387)
+++..+++||++|++|.+.+++.+... .+.+++.+.+.+. . ..++|+++.++++.+..+ .++++|+ +||+.+
T Consensus 89 ~~~~~~~~ir~~v~rg~~~~g~~~~~~-~~~~~i~~~~~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~K~~~nyl~~ 167 (306)
T PRK06606 89 KNNLKSAYIRPLVFVGDEGLGVRPHGL-PTDVAIAAWPWGAYLGEEALEKGIRVKVSSWTRHAPNSIPTRAKASGNYLNS 167 (306)
T ss_pred hcCCCCEEEEEEEEecCCccCcCCCCC-CceEEEEEeccccccCcccccCCeEEEEeeEecCCCCCcCcchhhhhccHHH
Confidence 998888999999999988777765433 4455555554331 1 135799999888776433 3578995 699999
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEe
Q 016536 245 VLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNV 323 (387)
Q Consensus 245 ~la~~eA~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I 323 (387)
++++++|+++|+||+||+|++|+|+|++++|| |++++++|+||+++ +||+||||+.++++|+++ |+ +|+|+.|
T Consensus 168 vla~~ea~~~G~de~l~l~~~g~v~E~~~sNl-f~v~~~~l~TP~~~~giL~GitR~~vl~~~~~~---g~--~v~e~~i 241 (306)
T PRK06606 168 ILAKTEARRNGYDEALLLDVEGYVSEGSGENI-FIVRDGVLYTPPLTSSILEGITRDTVITLAKDL---GI--EVIERRI 241 (306)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCEEEcCceEE-EEEECCEEECCCCcCCcCCCHHHHHHHHHHHHc---CC--cEEEEeC
Confidence 99999999999999999999999999999999 55689999999985 799999999999999998 98 9999999
Q ss_pred cHHhHhcccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhh
Q 016536 324 TVEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQ 375 (387)
Q Consensus 324 ~~~eL~~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~ 375 (387)
+++||.+|||+|+|||+.||+||.+||++.+++|++||++++|++.|.+.+.
T Consensus 242 ~~~eL~~AdevfltnS~~gi~PV~~id~~~~~~g~~g~~~~~L~~~~~~~~~ 293 (306)
T PRK06606 242 TRDELYIADEVFFTGTAAEVTPIREVDGRQIGNGKRGPITEKLQSAYFDIVR 293 (306)
T ss_pred CHHHHhhCCEEEEcCCcceEEEEEEECcEECCCCCCCHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999988899999999999985444
No 8
>PRK13356 aminotransferase; Provisional
Probab=100.00 E-value=6.6e-57 Score=437.06 Aligned_cols=273 Identities=23% Similarity=0.269 Sum_probs=237.8
Q ss_pred eeeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcC
Q 016536 95 SSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASN 174 (387)
Q Consensus 95 ~~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~ 174 (387)
..|+||.+++++.+.++++||||+||||||||+|+++|++++|++|++||.+||++|+|++|++.++|++.+.+++++++
T Consensus 8 ~~~~nG~~~~~~~~~i~~~drg~~yGdgvFEtir~~~g~~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~i~~~~ 87 (286)
T PRK13356 8 WTFFDGEWHEGNVPIMGPADHAAWLGSTVFDGARAFEGVTPDLDLHCARVNRSAEALGLKPTVSAEEIEALAREGLKRFD 87 (286)
T ss_pred eEEECCEEcchhhcccccccchhhhcceeEEEEEEecCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999999999999999999999999999888899999999999999886
Q ss_pred CC-CceEEEEEEccCCce-eecCCCCCCceEEEEEEecCCCCCCCCeEEEEeeeecCCC-C-CCCcc-ccCChhhHHHHH
Q 016536 175 CR-KGSLRYWLSAGVGDF-QLSPVGCHQSTFYVIVIQDDSPFVSKGVKVITSSIPIKPP-Q-FGTVK-SVNYLPNVLSKM 249 (387)
Q Consensus 175 ~~-~g~iR~~v~~G~g~~-~~~p~~~~~~~~~~~v~~~p~~~~~~Gv~l~~s~~~~~~p-~-~~~iK-t~NYl~~~la~~ 249 (387)
.. +++||+.+++|.+.. +..+... .+.+++.+.+.|.. ..+|+++.++++.+..+ . ...+| +.||+.++++++
T Consensus 88 ~~~~~~ir~~v~rg~g~~~~~~~~~~-~~~~~~~~~~~~~~-~~~gv~l~~~~~~r~~~~~~~~~~K~~~nyl~~vla~~ 165 (286)
T PRK13356 88 PDTALYIRPMYWAEDGFASGVAPDPE-STRFALCLEEAPMP-EPTGFSLTLSPFRRPTLEMAPTDAKAGCLYPNNARALR 165 (286)
T ss_pred CCCcEEEEEEEEeccCcccCcCCCcC-CceEEEEEEccCCC-CCCcEEEEEeeeecCCCCCCCccceeccchHHHHHHHH
Confidence 54 689999999987654 2323221 33444444444432 24799999988777533 2 25688 679999999999
Q ss_pred HHHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhH
Q 016536 250 EAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEG 328 (387)
Q Consensus 250 eA~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL 328 (387)
+|+++|+||+||+|++|+|+|++++|| |++++++|+||+++ +||+||||+.|+++|+++ |+ +|+|+.|+++||
T Consensus 166 ea~~~g~deal~ld~~G~v~E~~~sNl-f~v~~~~l~TP~~~~~~L~GItR~~vi~~a~~~---gi--~v~e~~i~~~eL 239 (286)
T PRK13356 166 EARSRGFDNALVLDMLGNVAETATSNV-FMVKDGVVFTPVPNGTFLNGITRQRVIALLRED---GV--TVVETTLTYEDF 239 (286)
T ss_pred HHHHcCCCEEEEECCCCCEEEcCceEE-EEEECCEEEcCCCCCCcccCHHHHHHHHHHHHc---CC--eEEEEecCHHHH
Confidence 999999999999999999999999999 55689999999985 799999999999999998 98 999999999999
Q ss_pred hcccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhhcCC
Q 016536 329 KKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQSGP 378 (387)
Q Consensus 329 ~~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~~g~ 378 (387)
.+|||+|+|||+.+|+||.+||++.++ .||++++|+++|++.++.|.
T Consensus 240 ~~adevfltns~~gi~PV~~id~~~~~---~g~~~~~l~~~~~~~~~~~~ 286 (286)
T PRK13356 240 LEADEVFSTGNYSKVVPVTRFDDRSLQ---PGPVTRRARELYWDWAHGGR 286 (286)
T ss_pred HhcCceEEecChheEEEEEEECCEEec---CChHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999995 48999999999998887763
No 9
>PRK12400 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=5.1e-57 Score=438.73 Aligned_cols=271 Identities=25% Similarity=0.417 Sum_probs=236.5
Q ss_pred eeeCCeecCCC--CcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhc
Q 016536 96 SIFGGITTDPA--AMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSAS 173 (387)
Q Consensus 96 ~~~ng~~~~~~--~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~ 173 (387)
.|+||.+++.+ ...||++||||+||||||||||+++|++++|++|++||.+||++|+|+.|++.+++++.+.++++++
T Consensus 7 ~~~ng~~v~~~~~~~~i~~~drgl~yGdgvFEtir~~~G~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~l~~~l~~~~~~~ 86 (290)
T PRK12400 7 VLWNDAVIDTTKQKTYIELEERGLQFGDGVYEVIRLYKGNFHLLDPHITRLYRSMEEIELTLPFSKAELITLLYKLIENN 86 (290)
T ss_pred EEECCEEechHHcCceeccccchhhhcceEEEEEEEECCEecccHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhc
Confidence 78999999988 4569999999999999999999999999999999999999999999998999999999999999998
Q ss_pred CC-CCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCC--CCCCCeEEEEeeeecCCCCCCCccccCChhhHHHHHH
Q 016536 174 NC-RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP--FVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKME 250 (387)
Q Consensus 174 ~~-~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~--~~~~Gv~l~~s~~~~~~p~~~~iKt~NYl~~~la~~e 250 (387)
+. .+++||+.+++|.+..++.+.....+.+++.+.+.+.. ....|+++...... ++..+++|++||+.+++++++
T Consensus 87 ~~~~~~~iri~v~rG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~Kt~nyl~~vla~~e 164 (290)
T PRK12400 87 NFHEDGTIYLQVSRGVQARTHTFSYDVPPTIYAYITKKERPALWIEYGVRAISEPDT--RWLRCDIKSLNLLPNILAATK 164 (290)
T ss_pred CCCCCEEEEEEEEeCCCCCCCCCCCCCCcEEEEEEecccCchhHHhcCcEEEECCCC--CccCCCCcccccHHHHHHHHH
Confidence 75 68899999999877555544333345666555432221 13578887654322 234577999999999999999
Q ss_pred HHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHh
Q 016536 251 AEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGK 329 (387)
Q Consensus 251 A~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~ 329 (387)
|+++|+||+||+| +|+|+|++++|| |+++|++|+||+++ ++|+||||+.++++|+++ |+ +|+|+.++++||.
T Consensus 165 a~~~g~deaL~l~-~g~v~E~t~sNi-f~v~~~~l~TPpl~~g~L~GItR~~llela~~~---gi--~v~E~~i~~~eL~ 237 (290)
T PRK12400 165 AERKGCKEALFVR-NGTVTEGSHSNF-FLIKNGTLYTHPANHLILNGIIRQYVLSLAKTL---RI--PVQEELFSVRDVY 237 (290)
T ss_pred HHHcCCCEEEEEc-CCEEEEcCceEE-EEEECCEEEeCCCCCCcCcCHHHHHHHHHHHHc---CC--cEEEEeCCHHHHH
Confidence 9999999999997 899999999999 56689999999995 799999999999999998 98 9999999999999
Q ss_pred cccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhh
Q 016536 330 KAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQ 375 (387)
Q Consensus 330 ~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~ 375 (387)
+|||+|+|||+.+|+||.+||++.+++|++||++++|++.|.+...
T Consensus 238 ~Adevfltns~~gv~PV~~i~~~~~~~~~~g~~t~~l~~~~~~~~~ 283 (290)
T PRK12400 238 QADECFFTGTTIEILPMTHLDGTAIQDGQVGPITKMLQRSFSQSLL 283 (290)
T ss_pred hCCeeeEccCcceEEEEEEECCEECCCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988999999999999986554
No 10
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=5.1e-57 Score=437.13 Aligned_cols=274 Identities=26% Similarity=0.331 Sum_probs=240.0
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCC
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 175 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~ 175 (387)
.|+||++++.+.+.++++||||+||||+|||||+++|++|+|++|++||.+||+.|+|+.+++.+.+++.+.+++++++.
T Consensus 2 ~~~nG~~~~~~~~~v~~~drg~~~GdgvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~l~~~~~~~~~ 81 (283)
T PRK07650 2 IYVNGQYVEEEEARISPFDHGYLYGLGVFETFRIYNGHPFLLDDHYDRLNDALDTLQIEWTMTKDEVLLILKNLLEKNGL 81 (283)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEECCEEEcHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 58899999999999999999999999999999999999999999999999999999998888999999999999998888
Q ss_pred CCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCCCCCCeEEEEeeeecC-CCCCCCccccCChhhHHHHHHHHHc
Q 016536 176 RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFVSKGVKVITSSIPIK-PPQFGTVKSVNYLPNVLSKMEAEET 254 (387)
Q Consensus 176 ~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~~~~Gv~l~~s~~~~~-~p~~~~iKt~NYl~~~la~~eA~~~ 254 (387)
.+++||++|++|.+.+++.+..+..+.+++.+.+.+..........+.+...+. ++.++++|++||+.+++++++|+++
T Consensus 82 ~~~~iRl~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kt~~y~~~v~a~~~a~~~ 161 (283)
T PRK07650 82 ENAYVRFNVSAGIGEIGLQTEMYEEPTVIVYMKPLAPPGLPAEKEGVVLKQRRNTPEGAFRLKSHHYLNNILGKREIGND 161 (283)
T ss_pred CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEEcCCCCChhhcCeEEEEEEEecCCCCCcchhHHhHHHHHHHHHHHHHc
Confidence 889999999999877776665555677776666543222111112222333333 3456889999999999999999999
Q ss_pred CCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcccE
Q 016536 255 GAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEE 333 (387)
Q Consensus 255 G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~adE 333 (387)
|+||+|++|++|+|+|++++|| |++++|+|+||+++ +||+||||+.++++|+++ |+ +|+|+.|+++||..|||
T Consensus 162 g~de~llln~~G~v~E~s~sNi-f~v~~g~l~TP~l~~g~L~GitR~~li~~~~~~---g~--~v~e~~i~~~dL~~ade 235 (283)
T PRK07650 162 PNKEGIFLTEEGYVAEGIVSNL-FWVKGDIVYTPSLETGILNGITRAFVIKVLEEL---GI--EVKEGFYTKEELLSADE 235 (283)
T ss_pred CCCeEEEECCCCeEEEcCceEE-EEEECCEEEcCCCcCCCcccHHHHHHHHHHHHc---CC--eEEEEecCHHHHhhCCE
Confidence 9999999999999999999999 55689999999985 899999999999999998 88 99999999999999999
Q ss_pred EEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhhc
Q 016536 334 MILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQS 376 (387)
Q Consensus 334 vfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~~ 376 (387)
+|+|||++||+||.+||++.++ |++||++++|+++|.+.+..
T Consensus 236 ifl~ns~~gv~pV~~i~~~~~~-g~~g~~~~~l~~~~~~~~~~ 277 (283)
T PRK07650 236 VFVTNSIQEIVPLTRIEERDFP-GKVGMVTKRLQNLYEMQREK 277 (283)
T ss_pred eeeecCcccEEEEEEECCEEeC-CCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999995 68999999999999876665
No 11
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase. Specificity is broad for various D-amino acids, and differs among members of the family; the family is designated equivalog, but with this caveat attached.
Probab=100.00 E-value=1.3e-56 Score=432.97 Aligned_cols=269 Identities=29% Similarity=0.440 Sum_probs=236.9
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCC
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 175 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~ 175 (387)
.|+||.+++.+.+.++++||+|+||||||||||+++|++|+|++|++||.+||+.|+|+.|++.+.+++.|.+++++++.
T Consensus 2 ~~~nG~~~~~~~~~i~~~drgl~yGdgvFEtir~~~g~~~~l~~H~~RL~~Sa~~l~i~~~~~~~~l~~~i~~~~~~~~~ 81 (276)
T TIGR01121 2 VLWNGQLVEREEAKIDIEDRGYQFGDGVYEVIRVYNGKLFTVNEHIDRLYASAAKIRIDIPYTKEELHQLLHELVEKNNL 81 (276)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEECCEEeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 58899999999999999999999999999999999999999999999999999999998889999999999999999988
Q ss_pred CCceEEEEEEccCCceeec-CCCCCCceEEEEEEecCCCC--CCCCeEEEEeeeecCCCCCCCccccCChhhHHHHHHHH
Q 016536 176 RKGSLRYWLSAGVGDFQLS-PVGCHQSTFYVIVIQDDSPF--VSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKMEAE 252 (387)
Q Consensus 176 ~~g~iR~~v~~G~g~~~~~-p~~~~~~~~~~~v~~~p~~~--~~~Gv~l~~s~~~~~~p~~~~iKt~NYl~~~la~~eA~ 252 (387)
.+++||+.+++|.+..++. |..+..+.+++.+.+.+... +..|+++..+...+ +..+++|+.||+.+++++++|+
T Consensus 82 ~~~~irl~~~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~--~~~~~~K~~nyl~~vla~~eA~ 159 (276)
T TIGR01121 82 NTGHVYFQVTRGVAPRNHQFPAGTVKPVITAYTKEVPRPEENLEKGVKAITVEDIR--WLRCDIKSLNLLGNVLAKQEAH 159 (276)
T ss_pred CceEEEEEEEcCCCCcCCCCCCCCCCcEEEEEEecccCChhHHhcCeEEEEecCCC--ccCCCcchhhhHHHHHHHHHHH
Confidence 8999999999987654443 33333455655555433221 35788876654332 2347899999999999999999
Q ss_pred HcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcc
Q 016536 253 ETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKA 331 (387)
Q Consensus 253 ~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~a 331 (387)
++|+||+||+| +|+|+|++++|| |++++|+|+||+++ ++|+||||+.++++|+++ |+ +|+|+.|+++||.+|
T Consensus 160 ~~g~de~l~~~-~g~v~E~~~sNi-f~v~~~~~~TP~~~~~~L~GitR~~vl~~a~~~---g~--~v~e~~i~~~el~~a 232 (276)
T TIGR01121 160 EKGAYEAILHR-GGTVTEGSSSNV-YGIKDGVLYTHPANNLILNGITRMVILACAEEN---GI--PVKEEPFTKEELLNA 232 (276)
T ss_pred HcCCCEEEEec-CCeEEecCceeE-EEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHC---CC--eEEEEeCCHHHHhcC
Confidence 99999999996 899999999999 55689999999995 799999999999999998 98 999999999999999
Q ss_pred cEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHH
Q 016536 332 EEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILED 373 (387)
Q Consensus 332 dEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~ 373 (387)
||+|+|||+.+|+||.+||++.+++++.||++++|+++|.+.
T Consensus 233 de~fltns~~gi~PV~~id~~~~~~~~~g~~~~~L~~~~~~~ 274 (276)
T TIGR01121 233 DEVFVSSTTAEITPVIEIDGQQIGDGKPGPWTRQLQKAFEEK 274 (276)
T ss_pred CEEEEecCcccEEEEEEECCEECCCCCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999888999999999999743
No 12
>PRK07544 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=3.1e-56 Score=433.51 Aligned_cols=270 Identities=22% Similarity=0.276 Sum_probs=237.2
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCC
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 175 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~ 175 (387)
.|+||.+++.+...+|++||||+||||||||+++++|++|+|++|++||++||++|+|+.|++.+.+.+++.++++.++.
T Consensus 11 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~~~~~ 90 (292)
T PRK07544 11 IWMDGELVPWRDAKVHVLTHGLHYASSVFEGERAYGGKIFKLREHSERLRRSAELLDFEIPYSVAEIDAAKKETLAANGL 90 (292)
T ss_pred EEECCEEEEhHHCccChhhhHhhhcceeEEeeEeeCCcccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999999999999999999999999999999999999998889999999999999999988
Q ss_pred CCceEEEEEEccCCceeecCCCCCCceEEEEEEecC--CC--CCCCCeEEEEeeeecCCCC-C-CCcc-ccCChhhHHHH
Q 016536 176 RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDD--SP--FVSKGVKVITSSIPIKPPQ-F-GTVK-SVNYLPNVLSK 248 (387)
Q Consensus 176 ~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p--~~--~~~~Gv~l~~s~~~~~~p~-~-~~iK-t~NYl~~~la~ 248 (387)
.+++||+++++|.+.+++.+..+ .+.+++.+.+.+ +. ...+|+++..+++++..+. + ..+| ++||+.|++++
T Consensus 91 ~~~~ir~~v~rg~~~~g~~~~~~-~~~~~v~~~~~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~k~~~~yl~~vla~ 169 (292)
T PRK07544 91 TDAYVRPVAWRGSEMMGVSAQQN-KIHLAIAAWEWPSYFDPEAKMKGIRLDIAKWRRPDPETAPSAAKAAGLYMICTISK 169 (292)
T ss_pred CCeEEEEEEEecCCCCCcCCCCC-CcEEEEEEeccccccCccccCCCEEEEEeEEEcCCCCCcCHhhhhhcccHHHHHHH
Confidence 89999999999988777655432 333444443322 11 2357999998887765432 2 3457 56899999999
Q ss_pred HHHHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCCCccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhH
Q 016536 249 MEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFDKILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEG 328 (387)
Q Consensus 249 ~eA~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL 328 (387)
++|+++|+||+||+|++|+|+|++++|| |+++||+|+||+++++|+||||+.|+++|+++ |+ +|+|+.|+++||
T Consensus 170 ~~A~~~G~deal~ld~~g~V~E~~~sNl-f~v~~~~l~TP~~~~~L~GItR~~vl~~a~~~---g~--~v~e~~i~~~eL 243 (292)
T PRK07544 170 HAAEAKGYADALMLDYRGYVAEATGANI-FFVKDGVIHTPTPDCFLDGITRQTVIELAKRR---GI--EVVERHIMPEEL 243 (292)
T ss_pred HHHHHcCCCeEEEECCCCCEEEcCceEE-EEEECCEEECCCCcccccchhHHHHHHHHHHc---CC--eEEEEecCHHHH
Confidence 9999999999999999999999999999 55689999999997799999999999999998 98 999999999999
Q ss_pred hcccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhh
Q 016536 329 KKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQ 375 (387)
Q Consensus 329 ~~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~ 375 (387)
.+|||+|+|||+.||+||.+||++.++ +||++++|++.|.+.++
T Consensus 244 ~~adevfltnS~~gi~PV~~i~~~~~~---~g~~~~~l~~~~~~~~~ 287 (292)
T PRK07544 244 AGFSECFLTGTAAEVTPVSEIGEYRFT---PGAITRDLMDDYEALVR 287 (292)
T ss_pred hhcCceeecCccceEEEEEEEeeEEeC---CChHHHHHHHHHHHHHh
Confidence 999999999999999999999999995 58999999999985554
No 13
>PLN02782 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=1.3e-55 Score=444.70 Aligned_cols=279 Identities=23% Similarity=0.347 Sum_probs=239.2
Q ss_pred eeCCeecCCCCcccCCCccccccccceeEEEEEe---CCe--ecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHH
Q 016536 97 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGY--LYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVS 171 (387)
Q Consensus 97 ~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~---~G~--lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~ 171 (387)
|.||.+++.....|++.|++||||||||||||++ ||+ +|++++|++||++||++|+|+.+ +.++|.++|.++++
T Consensus 96 w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~d~H~~RL~~SA~rL~lp~~-~~e~l~~~i~~lv~ 174 (403)
T PLN02782 96 FSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEENAIRMRNGAERMCMPAP-TVEQFVEAVKETVL 174 (403)
T ss_pred EeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeChHHHHHHHHHHHHHhCcCCC-CHHHHHHHHHHHHH
Confidence 5567777777889999999999999999999998 564 79999999999999999999765 99999999999999
Q ss_pred hcCC-------CCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCC--CCCCeEEEEe-eeecC-CCCCCCcccc-
Q 016536 172 ASNC-------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF--VSKGVKVITS-SIPIK-PPQFGTVKSV- 239 (387)
Q Consensus 172 a~~~-------~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~--~~~Gv~l~~s-~~~~~-~p~~~~iKt~- 239 (387)
.++. ...|||++++++.+.+++.|. ..+.+++++.+.+... ..+++++.++ ++.|. ++.++++|++
T Consensus 175 ~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~--~~~~~~i~~~p~~~~~~~g~~~v~l~v~~~~~Ra~p~g~g~~Kt~~ 252 (403)
T PLN02782 175 ANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPA--PEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIG 252 (403)
T ss_pred hccccCCCCCCccEEEEEEEEecCCCcCcCCC--CCcEEEEEEEECccccccCCccEEEEEeCceeecCCCCCcccchhh
Confidence 9874 346899999887666777664 3566776666543111 1135667665 36564 4578999987
Q ss_pred CChhhHHHHHHHHHcCCcEEEEEc--CCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccc
Q 016536 240 NYLPNVLSKMEAEETGAFAAIWLD--GEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLH 316 (387)
Q Consensus 240 NYl~~~la~~eA~~~G~de~L~ld--~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~ 316 (387)
||+++++++++|+++||||+||+| ++|+|+|++++|| |++++++|+||+++ +||+||||++||++|+++ |+
T Consensus 253 nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNl-F~v~~~~l~TP~l~~~iLpGITR~svlela~~~---Gi-- 326 (403)
T PLN02782 253 NYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNI-FIVKDNVISTPAIKGTILPGITRKSIIDVARSQ---GF-- 326 (403)
T ss_pred hHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEE-EEEECCEEEcCCCcCCcCcCHHHHHHHHHHHHc---CC--
Confidence 999999999999999999999999 4899999999999 55689999999995 799999999999999998 98
Q ss_pred eEEEEEecHHhHhcccEEEEEccccceEEEEEE--CCEEe--CCCCchHHHHHHHHHHHHHhhcCCC----Cccccc
Q 016536 317 GIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQW--DEQVI--GNGKEGPIAQALLDLILEDMQSGPP----TVRVAV 385 (387)
Q Consensus 317 ~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~i--d~~~i--~~g~~gpv~~~L~~~l~~~i~~g~~----~~~~~v 385 (387)
+|+|+.|+++||.+|||+|+|||+.+|+||.+| +|+.+ ++|+.||++++|++.|. +||+|.. .|.++|
T Consensus 327 ~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~L~~~l~-~iq~G~~~~~~~W~~~v 402 (403)
T PLN02782 327 QVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLYTVLT-SLQMGLIEDNMNWTVEL 402 (403)
T ss_pred eEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHHHHHHHH-HHhcCCCCCCCCCeEEC
Confidence 999999999999999999999999999999999 99987 77889999999999998 9999976 366665
No 14
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=5.2e-55 Score=425.10 Aligned_cols=265 Identities=26% Similarity=0.342 Sum_probs=234.2
Q ss_pred eeeeCC-----eecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHH
Q 016536 95 SSIFGG-----ITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQT 169 (387)
Q Consensus 95 ~~~~ng-----~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~l 169 (387)
.+|+|| .+++++.+.+|++||||+|||||||||++++|++++|++|++||.+||++|+|+.| +.+++.++|.++
T Consensus 8 ~~~~ng~~~~~~~~~~~~a~i~~~drg~~~GdgvFEt~rv~~g~i~~l~~Hl~RL~~Sa~~l~i~~~-~~~~l~~~i~~~ 86 (292)
T PRK07849 8 VVTLDPYGGSERVHDPSAPLLHADDLAAVRGDGVFETLLVRDGRPCNLEAHLERLARSAALLDLPEP-DLDRWRRAVELA 86 (292)
T ss_pred EEEECCCCccceEechHHCCccchhcchhccceEEEEEEEECCEECCHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHH
Confidence 478899 99999999999999999999999999999999999999999999999999999876 889999999999
Q ss_pred HHhc--CCCCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCC---CCCCCeEEEEeeeec------CCC-CCCCcc
Q 016536 170 VSAS--NCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP---FVSKGVKVITSSIPI------KPP-QFGTVK 237 (387)
Q Consensus 170 v~a~--~~~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~---~~~~Gv~l~~s~~~~------~~p-~~~~iK 237 (387)
++++ +..+++||+++++|.++.+ .+.+++.+.+.+.. ....|+++++++.++ ..| .++++|
T Consensus 87 v~~~~~~~~~~~iRl~v~~g~~~~~-------~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~p~~~~~~K 159 (292)
T PRK07849 87 IEEWRAPEDEAALRLVYSRGRESGG-------APTAWVTVSPVPERVARARREGVSVITLDRGYPSDAAERAPWLLAGAK 159 (292)
T ss_pred HHHhcCCCCCeEEEEEEeCCCCCCC-------CCeEEEEEeecCccchhhccCCeEEEEEeccccCcccccCcccccccc
Confidence 9887 4578899999999866431 34566666654322 235789988875432 123 567899
Q ss_pred ccCChhhHHHHHHHHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccc
Q 016536 238 SVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLH 316 (387)
Q Consensus 238 t~NYl~~~la~~eA~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~ 316 (387)
++||+.++++.++|+++|+||+|++|++|+|+|++++|| |+++|++|+||+++ +||+||||+.++++|+++ |+
T Consensus 160 t~ny~~~i~a~~~A~~~g~dd~L~ld~~G~v~E~s~~Ni-f~~~~g~l~TP~~~~giL~GItR~~vie~~~~~---g~-- 233 (292)
T PRK07849 160 TLSYAVNMAALRYAARRGADDVIFTSTDGYVLEGPTSTV-VIATDDRLLTPPPWYGILPGTTQAALFEVAREK---GW-- 233 (292)
T ss_pred hhhhHHHHHHHHHHHHcCCCEEEEEcCCCcEEECCceEE-EEEECCEEECCCCcCCCCccHHHHHHHHHHHHc---CC--
Confidence 999999999999999999999999999999999999999 55689999999995 899999999999999998 87
Q ss_pred eEEEEEecHHhHhcccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhhc
Q 016536 317 GIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQS 376 (387)
Q Consensus 317 ~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~~ 376 (387)
+|+|+.|+++||.+|||+|+|||+.||+||.+||++.++. ||++++|+++|++.+.+
T Consensus 234 ~v~er~i~~~eL~~Adevfltns~~gi~pV~~id~~~~~~---~~~~~~l~~~~~~~~~~ 290 (292)
T PRK07849 234 DCEYRALRPADLFAADGVWLVSSVRLAARVHTLDGRPLPR---DPLADELTELVDAAIVS 290 (292)
T ss_pred ceEEEECCHHHHhhCCEEEEecCcceEEEEEEECCEECCC---ChHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999975 69999999999876654
No 15
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed
Probab=100.00 E-value=9.8e-55 Score=417.86 Aligned_cols=260 Identities=26% Similarity=0.359 Sum_probs=227.5
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCC
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 175 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~ 175 (387)
.|+||++ .+.+|++||||+||||||||+++++|++++|++|++||.+||++|+|+.| +.+.+.+.+.+++. +.
T Consensus 2 ~~~nG~~----~~~i~~~d~g~~~GdgvFEtir~~~g~~~~l~~Hl~RL~~Sa~~l~~~~~-~~~~~~~~l~~~~~--~~ 74 (268)
T PRK06092 2 FWINGQP----QESLSVSDRSTQYGDGCFTTARVRDGQVSLLSRHLQRLQDACERLAIPLD-DWAQLEQEMKQLAA--EL 74 (268)
T ss_pred EEECCcC----cCccCccccccccccceeeEEEEECCeeccHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHh--hC
Confidence 5889985 56799999999999999999999999999999999999999999999765 66778888877762 45
Q ss_pred CCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCC---CCCCeEEEEeeeec-CCCCCCCccccCChhhHHHHHHH
Q 016536 176 RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF---VSKGVKVITSSIPI-KPPQFGTVKSVNYLPNVLSKMEA 251 (387)
Q Consensus 176 ~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~---~~~Gv~l~~s~~~~-~~p~~~~iKt~NYl~~~la~~eA 251 (387)
.++++|+++++|.+++++.+..++.+.+++.+.+.+... ..+|+++.+++.++ .+|.+.++|+.||+.+++++++|
T Consensus 75 ~~~~iri~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~Kt~ny~~~~~a~~~A 154 (268)
T PRK06092 75 ENGVLKVIISRGSGGRGYSPAGCAAPTRILSVSPYPAHYSRWREQGITLALCPTRLGRNPLLAGIKHLNRLEQVLIRAEL 154 (268)
T ss_pred CCeEEEEEEEccCCCCCCCCCCCCCCeEEEEeccCCccChhHhhCCEEEEEeccccCCCCCccCcchhhhHHHHHHHHHH
Confidence 678999999999877777766666677776665443222 35799988887655 35567889999999999999999
Q ss_pred HHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhc
Q 016536 252 EETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKK 330 (387)
Q Consensus 252 ~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~ 330 (387)
+++|+||+||+|++|+|+|++++|| |++++|+|+||+.+ ++|+||||+.++++|+++ |+ +|+|+.|+++||.+
T Consensus 155 ~~~g~de~l~l~~~g~v~E~s~sNi-f~v~~~~~~TP~~~~~~L~GitR~~vl~~~~~~---g~--~v~e~~i~~~dL~~ 228 (268)
T PRK06092 155 EQTEADEALVLDSEGWVIECCAANL-FWRKGGVVYTPDLDQCGVAGVMRQFILELLAQS---GY--PVVEVDASLEELLQ 228 (268)
T ss_pred HhcCCCEEEEECCCCCEEEccceEE-EEEECCEEECCCccccCcccHHHHHHHHHHHHc---CC--eEEEEECCHHHHhh
Confidence 9999999999999999999999999 55689999999996 789999999999999998 88 99999999999999
Q ss_pred ccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHH
Q 016536 331 AEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLIL 371 (387)
Q Consensus 331 adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~ 371 (387)
|||+|+|||++||+||.+||++.++. ||++++|++.+.
T Consensus 229 adevfltns~~gi~pV~~id~~~~~~---g~~~~~l~~~~~ 266 (268)
T PRK06092 229 ADEVFICNSLMPVWPVRAIGETSYSS---GTLTRYLQPLCE 266 (268)
T ss_pred CCEEEEeCCcceEEEEEEECCEEccc---hHHHHHHHHHHh
Confidence 99999999999999999999999954 799999999875
No 16
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=100.00 E-value=1.8e-54 Score=412.18 Aligned_cols=251 Identities=37% Similarity=0.569 Sum_probs=228.5
Q ss_pred ccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCceee
Q 016536 114 DHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQL 193 (387)
Q Consensus 114 D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~~~g~iR~~v~~G~g~~~~ 193 (387)
||||+||||+||||++++|++++|++|++||.+||+.|+|+++++.+.+++.+.++++.++..+++||++|++|.+.+++
T Consensus 1 drg~~~GdgvFEt~r~~~g~~~~l~~Hl~RL~~sa~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~ir~~v~~g~~~~~~ 80 (256)
T cd00449 1 DRGLHYGDGVFEGLRAGKGRLFRLDEHLDRLNRSAKRLGLPIPYDREELREALKELVAANNGASLYIRPLLTRGVGGLGV 80 (256)
T ss_pred CceeeccceEEEEEEEcCcEEEChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEEEEEecccccCC
Confidence 79999999999999999999999999999999999999998788999999999999998888889999999999877777
Q ss_pred cCCCCCCceEEEEEEecCC--CCCCCCeEEEEeeeecC--CCCCCCccccCChhhHHHHHHHHHcCCcEEEEEcCCCcEE
Q 016536 194 SPVGCHQSTFYVIVIQDDS--PFVSKGVKVITSSIPIK--PPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIA 269 (387)
Q Consensus 194 ~p~~~~~~~~~~~v~~~p~--~~~~~Gv~l~~s~~~~~--~p~~~~iKt~NYl~~~la~~eA~~~G~de~L~ld~~G~V~ 269 (387)
.+..+..+.+++.+.+.+. ....+|+++.+++.++. ++.++++|+.||+.+++++++|+++|+||+|++|++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Kt~~~~~~~~a~~~a~~~g~de~llld~~g~v~ 160 (256)
T cd00449 81 APPPSPEPTFVVFASPVGAYAKGGEKGVRLITSPDRRRAAPGGTGDAKTGGNLNSVLAKQEAAEAGADEALLLDDNGYVT 160 (256)
T ss_pred CCCCCCCcEEEEEEeeccccccccCCCeEEEEeeeEEeCCCCCCccchhhCCHHHHHHHHHHHHcCCCEEEEECCCCcEE
Confidence 6666667788877766543 23468999998887763 5578899999999999999999999999999999999999
Q ss_pred eeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcccEEEEEccccceEEEEE
Q 016536 270 EGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQ 348 (387)
Q Consensus 270 Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~ 348 (387)
|++++|| |++++++|+||+++ +||+||||+.++++|+++ |+ +|+|+.++++||.+|||+|+|||++||+||.+
T Consensus 161 E~s~sNl-f~~~~~~l~TP~~~~g~L~GitR~~vl~~~~~~---g~--~v~e~~i~~~dL~~adevfl~ns~~gv~pV~~ 234 (256)
T cd00449 161 EGSASNV-FIVKDGELVTPPLDGGILPGITRDSVIELAKEL---GI--KVEERPISLDELYAADEVFLTGTAAEVTPVTE 234 (256)
T ss_pred EcCceEE-EEEECCEEEeCCCCCCcCcchhHHHHHHHHHHc---CC--eEEEEecCHHHHhhCCEEEEccccceEEEEEE
Confidence 9999999 55689999999996 699999999999999998 88 99999999999999999999999999999999
Q ss_pred ECCEEeCCCCchHHHHHHHHHH
Q 016536 349 WDEQVIGNGKEGPIAQALLDLI 370 (387)
Q Consensus 349 id~~~i~~g~~gpv~~~L~~~l 370 (387)
||++.++++++||++++|++.|
T Consensus 235 i~~~~~~~~~~~~~~~~l~~~~ 256 (256)
T cd00449 235 IDGRGIGDGKPGPVTRKLRELL 256 (256)
T ss_pred ECCeecCCCCCCHHHHHHHHhC
Confidence 9999998888999999998764
No 17
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate. Based on the information available from the crystal structure, most members of this subgroup are likely to function as dimers. The enzyme from E.Coli, the structure of which is available, is a homodimer that is folded into a small and a larger domain. The coenzyme pyridoxal 5; -phosphate resides at the interface of the two domains that is linked by a flexible loop. Members of this subgroup are found in Eukaryotes and bacteria.
Probab=100.00 E-value=9.8e-55 Score=413.63 Aligned_cols=247 Identities=36% Similarity=0.531 Sum_probs=222.4
Q ss_pred ccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCceee
Q 016536 114 DHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQL 193 (387)
Q Consensus 114 D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~~~g~iR~~v~~G~g~~~~ 193 (387)
||||+||||+||||++++|++++|++|++||.+||++|+|+ +++.+.++++|.++++.++..+++||+++++|.+..++
T Consensus 1 Drg~~~GdgvFEt~~~~~g~~~~l~~Hl~RL~~Sa~~l~~~-~~~~~~l~~~i~~~i~~~~~~~~~ir~~v~rg~~~~~~ 79 (249)
T cd01559 1 DRGFAYGDGVFETMRALDGRLFLLDAHLARLERSARRLGIP-EPDLPRLRAALESLLAANDIDEGRIRLILSRGPGGRGY 79 (249)
T ss_pred CCcccccceeEEEEEEECCEEccHHHHHHHHHHHHHhcCcC-CCCHHHHHHHHHHHHHhCCCCceEEEEEEecCCCCCCC
Confidence 79999999999999999999999999999999999999997 88999999999999999888889999999998877777
Q ss_pred cCCCCCCceEEEEEEecCCCCCCCCeEEEEeeeec-CCCCCCCccccCChhhHHHHHHHHHcCCcEEEEEcCCCcEEeeC
Q 016536 194 SPVGCHQSTFYVIVIQDDSPFVSKGVKVITSSIPI-KPPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGP 272 (387)
Q Consensus 194 ~p~~~~~~~~~~~v~~~p~~~~~~Gv~l~~s~~~~-~~p~~~~iKt~NYl~~~la~~eA~~~G~de~L~ld~~G~V~Egs 272 (387)
.+..++.+.+++.+.+.+.....+|+++.++++++ .++.++++|+.||+.+++++++|+++|+||+||+|++|+|+|++
T Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~Kt~ny~~~~~a~~~a~~~g~de~l~l~~~g~v~E~~ 159 (249)
T cd01559 80 APSVCPGPALYVSVIPLPPAWRQDGVRLITCPVRLGEQPLLAGLKHLNYLENVLAKREARDRGADEALFLDTDGRVIEGT 159 (249)
T ss_pred CCCCCCCCEEEEEeccCCHHHHhCCcEEEEcccccCCCCCCCCcchhhhHHHHHHHHHHHhcCCCEEEEEcCCCCEEEec
Confidence 66666677777666544332245799999888776 35678999999999999999999999999999999999999999
Q ss_pred cceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcccEEEEEccccceEEEEEECC
Q 016536 273 NMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDE 351 (387)
Q Consensus 273 ~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~id~ 351 (387)
++|| |++++|+|+||+++ +||+||||+.++++|+++ |+ +|+|+.|+++||.+|||+|+|||++||+||.+||+
T Consensus 160 ~~Ni-f~~~~~~~~TP~~~~g~L~Gitr~~~l~~~~~~---g~--~v~e~~i~~~el~~ade~~~~ns~~gi~pV~~id~ 233 (249)
T cd01559 160 ASNL-FFVKDGELVTPSLDRGGLAGITRQRVIELAAAK---GY--AVDERPLRLEDLLAADEAFLTNSLLGVAPVTAIDD 233 (249)
T ss_pred ceEE-EEEECCEEECCCcccCccccHHHHHHHHHHHHc---Cc--eEEEEecCHHHHhhCCEEEEecCccceeEEEEECC
Confidence 9999 55689999999995 799999999999999998 88 99999999999999999999999999999999998
Q ss_pred EEeCCCCchHHHHHHHHHH
Q 016536 352 QVIGNGKEGPIAQALLDLI 370 (387)
Q Consensus 352 ~~i~~g~~gpv~~~L~~~l 370 (387)
+.+++||++++|++.|
T Consensus 234 ---~~~~~~~~~~~l~~~~ 249 (249)
T cd01559 234 ---HDGPPGPLTRALRELL 249 (249)
T ss_pred ---cccCccHHHHHHHHhC
Confidence 3457899999998864
No 18
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional
Probab=100.00 E-value=1.8e-54 Score=431.37 Aligned_cols=279 Identities=24% Similarity=0.296 Sum_probs=239.8
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEe---CCe--ecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHH
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGY--LYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTV 170 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~---~G~--lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv 170 (387)
.|+||.+++.+.+.|++.|||||||||||||+|++ +|+ +|+|++|++||.+||++|+|+.| +.++|+++|.+++
T Consensus 45 ~~~ng~~v~~~~a~i~~~drgl~yGDGvFEtir~y~~~~G~i~lf~l~~Hl~RL~~Sa~~L~i~~p-~~~~l~~~i~~lv 123 (355)
T PLN03117 45 SFSEGKIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNALRMQTGADRLCMTPP-SLEQFVEAVKQTV 123 (355)
T ss_pred eEECCEEEEchhceeCcchhhhhhcceeEeeEEEEECCCCcEeeeCcHHHHHHHHHHHHHhCCCCC-CHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998 897 79999999999999999999877 9999999999999
Q ss_pred HhcCC-------CCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCC-CCCCCeEEEEee-eecC-CCCCCCcccc-
Q 016536 171 SASNC-------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP-FVSKGVKVITSS-IPIK-PPQFGTVKSV- 239 (387)
Q Consensus 171 ~a~~~-------~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~-~~~~Gv~l~~s~-~~~~-~p~~~~iKt~- 239 (387)
++++. ...|+|+.++++.+..++.|. +.+.+++.+.+.+.. ...+|+++.+++ +.+. ++.++++|++
T Consensus 124 ~~n~~~i~~~~~~~~yir~~~~g~~~~~g~~~~--~~~~~~i~~~p~~~~~~~~~gi~l~~~~~~~r~~~~~l~~~K~~~ 201 (355)
T PLN03117 124 LANKKWVPPPGKGTLYIRPLLIGSGAVLGVAPA--PEYTFLIYASPVGNYHKASSGLNLKVDHKHRRAHSGGTGGVKSCT 201 (355)
T ss_pred HhccccccCCCCCcEEEEEEEEEecCccCcCCC--CCcEEEEEEEeccccccCCCCEEEEEcCceEeCCCCCccchhhhh
Confidence 98873 245889988766444455442 345666666554322 234789888764 5554 4567899995
Q ss_pred CChhhHHHHHHHHHcCCcEEEEEcCC--CcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccc
Q 016536 240 NYLPNVLSKMEAEETGAFAAIWLDGE--GFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLH 316 (387)
Q Consensus 240 NYl~~~la~~eA~~~G~de~L~ld~~--G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~ 316 (387)
||+.++++++||+++||||+||+|.+ |+|+|++++|| |+++|++|+||+++ +||+||||+.|+++|+++ |+
T Consensus 202 nyl~~vla~~eA~~~G~deaL~ld~~~~g~v~E~~~sNl-F~v~~~~l~TP~l~~~iL~GItR~~vl~la~~~---Gi-- 275 (355)
T PLN03117 202 NYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEELSACNI-FILKGNIVSTPPTSGTILPGVTRKSISELARDI---GY-- 275 (355)
T ss_pred hhHHHHHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEE-EEEECCEEEeCCCcCCCCCCHHHHHHHHHHHHC---CC--
Confidence 99999999999999999999999984 69999999999 55689999999985 799999999999999998 98
Q ss_pred eEEEEEecHHhHhcccEEEEEccccceEEEEEECCE----EeCCCCchHHHHHHHHHHHHHhhcCCC----Cccccc
Q 016536 317 GIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQ----VIGNGKEGPIAQALLDLILEDMQSGPP----TVRVAV 385 (387)
Q Consensus 317 ~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~id~~----~i~~g~~gpv~~~L~~~l~~~i~~g~~----~~~~~v 385 (387)
+|+|+.|+++||.+|||+|+|||+.+|+||.+++.. .+++++ ||+|++|+++|. +||.|.. .|.++|
T Consensus 276 ~v~Er~i~~~eL~~AdEvFltnT~~~I~PV~~i~~~~~~~~~~~~~-~~~~~~l~~~~~-~~~~g~~~~~~~W~~~v 350 (355)
T PLN03117 276 QVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGE-EALSTKLHLILT-NIQMGVVEDKKGWMVEI 350 (355)
T ss_pred EEEEEEccHHHHhhCCEEEEccCcceEEEEEEEEecCceEEeCCCC-ChHHHHHHHHHH-HHhCCCCCCCCCCEEEc
Confidence 999999999999999999999999999999999755 677764 899999999999 9999876 477776
No 19
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase. Members of this protein family are aminodeoxychorismate lyase (ADC lyase), EC 4.1.3.38, the PabC protein of PABA biosynthesis. PABA (para-aminobenzoate) is a precursor of folate, needed for de novo purine biosynthesis. This enzyme is a pyridoxal-phosphate-binding protein in the class IV aminotransferase family (pfam01063).
Probab=100.00 E-value=3e-54 Score=412.87 Aligned_cols=255 Identities=28% Similarity=0.387 Sum_probs=224.7
Q ss_pred eeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCCC
Q 016536 97 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCR 176 (387)
Q Consensus 97 ~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~~ 176 (387)
|+||+. ++.++++||||+||||||||+++++|++++|++|++||.+||+.|+|+.| +.+++++.+.++++.+ .
T Consensus 1 ~~nG~~----~~~i~~~d~g~~~G~gvFEt~r~~~G~~~~l~~Hl~RL~~Sa~~l~~~~~-~~~~l~~~~~~~~~~~--~ 73 (261)
T TIGR03461 1 WVNGVL----QTQISVSDRGLQYGDGCFTTAKVRNGKIELLDLHLERLQDAAARLGIPLP-DWDALREEMAQLAAGY--S 73 (261)
T ss_pred CcCCcc----cCccCcccccccccceeEEEEEEECCEeccHHHHHHHHHHHHHhhCCCCC-CHHHHHHHHHHHHHhC--C
Confidence 678984 66799999999999999999999999999999999999999999999876 8999999999998875 4
Q ss_pred CceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCC---CCCCeEEEEeeeecC-CCCCCCccccCChhhHHHHHHHH
Q 016536 177 KGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF---VSKGVKVITSSIPIK-PPQFGTVKSVNYLPNVLSKMEAE 252 (387)
Q Consensus 177 ~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~---~~~Gv~l~~s~~~~~-~p~~~~iKt~NYl~~~la~~eA~ 252 (387)
++++|+++++|.++.++.+..+..+.+++.+.+.+... .++|+++.+++.++. ++.++++|+.||+.+++++++|+
T Consensus 74 ~~~ir~~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~Kt~~y~~~~~a~~~A~ 153 (261)
T TIGR03461 74 LGVLKVIISRGSGGRGYSPPGCSDPTRIISVSPYPAHYSAWQQQGIRLGVSPVRLGRNPLLAGIKHLNRLEQVLIKAELE 153 (261)
T ss_pred CeEEEEEEecCCCCCCCCCCCCCCCcEEEEeccCcccChhHhcCCEEEEEeccccCCCCCCcCccccccHHHHHHHHHhh
Confidence 78999999998776666655555666766665443222 357999888877653 55678899999999999999999
Q ss_pred HcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcc
Q 016536 253 ETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKA 331 (387)
Q Consensus 253 ~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~a 331 (387)
++|+||+||+|++|+|+|++++|| |+++||+|+||+++ ++|+||||+.++++|+++ |+ +|+|+.|+++||.+|
T Consensus 154 ~~g~de~llln~~g~v~E~s~sNi-f~~~~~~l~TP~~~~~~L~GItR~~il~~~~~~---g~--~v~E~~i~~~eL~~a 227 (261)
T TIGR03461 154 NSEADEALVLDTDGNVVECTAANI-FWRKGNQVFTPDLSYCGVAGVMRQHVLALLPAL---GY--EIEEVKAGLEELLSA 227 (261)
T ss_pred hcCCCEEEEECCCCCEEEeccEEE-EEEECCEEECCCccccCcccHHHHHHHHHHHHc---CC--eEEEEecCHHHHhhC
Confidence 999999999999999999999999 55689999999995 799999999999999988 87 999999999999999
Q ss_pred cEEEEEccccceEEEEEECCEEeCCCCchHHHHHHH
Q 016536 332 EEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALL 367 (387)
Q Consensus 332 dEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~ 367 (387)
||+|+|||+++|+||.+||++.++. ||++++|+
T Consensus 228 de~f~~ns~~gi~pV~~id~~~~~~---~~~~~~l~ 260 (261)
T TIGR03461 228 DEVFITNSLMGVVPVNAIGETSYPS---RTLTRLLQ 260 (261)
T ss_pred CEEEEeCCccceEEEEEECCEEecc---hHHHHHhh
Confidence 9999999999999999999999964 79998874
No 20
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.
Probab=100.00 E-value=2.9e-54 Score=423.67 Aligned_cols=279 Identities=25% Similarity=0.352 Sum_probs=233.7
Q ss_pred eeCCeecCCCCcccCCCccccccccceeEEEEEe---CCe--ecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHH
Q 016536 97 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGY--LYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVS 171 (387)
Q Consensus 97 ~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~---~G~--lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~ 171 (387)
|+||.+++.+.+.||++||||+||||||||++++ +|+ +|+|++|++||.+||++|+|++ ++.++|++++.++++
T Consensus 1 ~~nG~~~~~~~a~i~~~Drg~~yGdGvFEtir~~~~~~g~~~~~~l~~Hl~RL~~sa~~L~i~~-~~~~~l~~~l~~~~~ 79 (313)
T TIGR01123 1 WHNGRLTPYGPLHLDPGSTVLHYGQECFEGLKAYRCADGSIVLFRPDANAARLRRSARRLLMPE-LPDELFLEALRQLVK 79 (313)
T ss_pred CCCCEEEECccCeeCcchhHHHhhhhheeeeeEEECCCCcEeeeChHHHHHHHHHHHHHhCCCC-CCHHHHHHHHHHHHH
Confidence 6799999999999999999999999999999988 897 7899999999999999999964 599999999999999
Q ss_pred hcCCC--------CceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCCCCC---CeEEEE-eeeecCCC-CCCCccc
Q 016536 172 ASNCR--------KGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFVSK---GVKVIT-SSIPIKPP-QFGTVKS 238 (387)
Q Consensus 172 a~~~~--------~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~~~~---Gv~l~~-s~~~~~~p-~~~~iKt 238 (387)
+++.. .+++|+.+++|.+.+++.+.. .+.+++.+.+.+. .+.. ++++.. ....+..+ .++++|+
T Consensus 80 ~~~~~~~~~~~~~~~~ir~~v~~~~~~~g~~~~~--~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~l~~~K~ 156 (313)
T TIGR01123 80 ANKDWVPPYGSGASLYLRPFVIGTEPNLGVRPAP--EYLFYVFASPVGA-YFKGGLAPVSIFVTTEYDRAAPGGTGAVKV 156 (313)
T ss_pred HccccCCCCCCCCcEEEEeEEEecCCccccCCCC--ccEEEEEEEEchh-hccccccceeEEecccceecCCCCCcccee
Confidence 87642 568999999987767766542 4667666654432 1222 345443 33444443 4789999
Q ss_pred -cCChhhHHHHHHHHHcCCcEEEEEcCCCc--EEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCc
Q 016536 239 -VNYLPNVLSKMEAEETGAFAAIWLDGEGF--IAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGK 314 (387)
Q Consensus 239 -~NYl~~~la~~eA~~~G~de~L~ld~~G~--V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~ 314 (387)
+||+.++++++||+++||||+|++|++|+ |+|++++||||+.++|+|+||+++ +||+||||+.|+++|+++ |+
T Consensus 157 ~~nyl~~vla~~eA~~~g~deal~ld~~g~g~v~E~~~sNlf~v~~~g~l~Tp~l~~~~L~GItR~~vi~l~~~~---Gi 233 (313)
T TIGR01123 157 GGNYAASLLAQAKAAEQGCDQVVYLDPVEHTYIEEVGAMNFFFITGDGELVTPPLSGSILPGITRDSLLQLAKDL---GM 233 (313)
T ss_pred ccccHHHHHHHHHHHHCCCCEEEEEeCCCCeEEEEcCcEeEEEEEcCCEEEeCCCCCCCCcchHHHHHHHHHHHc---CC
Confidence 69999999999999999999999999977 999999999554335799999985 799999999999999998 98
Q ss_pred cceEEEEEecHHhHhcc----cEEEEEccccceEEEEEE--CCEE--eCCCCchHHHHHHHHHHHHHhhcCCC----Ccc
Q 016536 315 LHGIKVGNVTVEEGKKA----EEMILLGSGVLVRPVVQW--DEQV--IGNGKEGPIAQALLDLILEDMQSGPP----TVR 382 (387)
Q Consensus 315 ~~~V~Er~I~~~eL~~a----dEvfltnT~~gv~PV~~i--d~~~--i~~g~~gpv~~~L~~~l~~~i~~g~~----~~~ 382 (387)
+|+|++|+++||.+| ||+|+|||+.+|+||.+| |++. +++|++||++++|+++|++ ++.|.. .|.
T Consensus 234 --~v~e~~i~~~~l~~A~~~~devfltnS~~gi~PV~~i~~d~~~~~~~~g~~g~~~~~l~~~~~~-~~~~~~~~~~~w~ 310 (313)
T TIGR01123 234 --EVEERRIDIDELKAFVEAGEEVFACGTAAVITPVGEIQHGGKEVVFASGQPGEVTKALYDELTD-IQYGDFEDPYGWI 310 (313)
T ss_pred --eEEEEecCHHHHHHHHhcCCEEEEccCceEEEEEEEEEECCeEEEcCCCCCChHHHHHHHHHHH-HhcCCCCCCCCCe
Confidence 999999999999999 999999999999999999 7875 7778899999999999985 444433 355
Q ss_pred ccc
Q 016536 383 VAV 385 (387)
Q Consensus 383 ~~v 385 (387)
.+|
T Consensus 311 ~~~ 313 (313)
T TIGR01123 311 VEV 313 (313)
T ss_pred eeC
Confidence 554
No 21
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.
Probab=100.00 E-value=5.3e-54 Score=415.43 Aligned_cols=255 Identities=29% Similarity=0.452 Sum_probs=226.7
Q ss_pred cCCCccccccccceeEEEEEeC-----CeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcC-------CCC
Q 016536 110 IPMDDHMVHRGHGVFDTAAICD-----GYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASN-------CRK 177 (387)
Q Consensus 110 ip~~D~g~~yG~gvFEtlrv~~-----G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~-------~~~ 177 (387)
++++||||+||||||||+|+++ |++|+|++|++||.+||++|+|+ +++.++|.+++.++++.++ ..+
T Consensus 2 i~~~drg~~yGdgvFEtir~~~~~~g~g~~~~l~~Hl~RL~~sa~~l~i~-~~~~~~l~~~i~~~i~~~~~~~~~~~~~~ 80 (279)
T cd01557 2 LHPATHALHYGQAVFEGLKAYRTPDGKIVLFRPDENAERLNRSARRLGLP-PFSVEEFIDAIKELVKLDADWVPYGGGAS 80 (279)
T ss_pred cCccccHhhcChhheeeEEEEecCCCCEeEECHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHhccccCCCCCCCC
Confidence 7899999999999999999999 89999999999999999999998 8899999999999999873 357
Q ss_pred ceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCC--CCCCeEEEEeeeecCCC-CCCCccc-cCChhhHHHHHHHHH
Q 016536 178 GSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF--VSKGVKVITSSIPIKPP-QFGTVKS-VNYLPNVLSKMEAEE 253 (387)
Q Consensus 178 g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~--~~~Gv~l~~s~~~~~~p-~~~~iKt-~NYl~~~la~~eA~~ 253 (387)
++||+.|++|.+.+++.+. ..+.+++.+.+.+... ..+|+++.++++++..+ ..+.+|+ +||+.+++++++|++
T Consensus 81 ~~ir~~v~rg~~~~g~~~~--~~~~~~i~~~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~K~~~nyl~~vla~~eA~~ 158 (279)
T cd01557 81 LYIRPFIFGTDPQLGVSPA--LEYLFAVFASPVGAYFKGGEKGVSALVSSFRRAAPGGPGAAKAGGNYAASLLAQKEAAE 158 (279)
T ss_pred EEEEEEEEeccccCCcCCC--CccEEEEEEEEccccccCCCCCeEEEEeeEEcCCCCCCcccchhhccHHHHHHHHHHHH
Confidence 8999999999877776654 3566776665543211 34799999888777654 3456995 799999999999999
Q ss_pred cCCcEEEEEcCC-CcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcc
Q 016536 254 TGAFAAIWLDGE-GFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKA 331 (387)
Q Consensus 254 ~G~de~L~ld~~-G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~a 331 (387)
+|+||+|++|++ |+|+|++++|| |++++++|+||+++ ++|+||||+.++++|+++ |+ +|+|+.|+++||.+|
T Consensus 159 ~g~de~l~ld~~~g~v~E~~~sNl-f~v~~~~l~TP~~~~~~L~Gitr~~v~~~~~~~---Gi--~v~e~~i~~~~l~~a 232 (279)
T cd01557 159 KGYDQALWLDGAHGYVAEVGTMNI-FFVKDGELITPPLDGSILPGITRDSILELARDL---GI--KVEERPITRDELYEA 232 (279)
T ss_pred CCCCEEEEEcCCCCEEEEeCcEEE-EEEECCEEEcCCCcCCCCCchHHHHHHHHHHHc---CC--eEEEEeCCHHHHhhC
Confidence 999999999999 99999999999 55689999999996 799999999999999998 98 999999999999999
Q ss_pred cEEEEEccccceEEEEEECCEEe--CCCCchHHHHHHHHHHHHH
Q 016536 332 EEMILLGSGVLVRPVVQWDEQVI--GNGKEGPIAQALLDLILED 373 (387)
Q Consensus 332 dEvfltnT~~gv~PV~~id~~~i--~~g~~gpv~~~L~~~l~~~ 373 (387)
||+|+|||+.||+||.+||++.+ +++++||++++|++.|++.
T Consensus 233 de~f~~ns~~gi~pV~~i~~~~~~~~~~~~gp~~~~l~~~~~~~ 276 (279)
T cd01557 233 DEVFATGTAAVVTPVGEIDYRGKEPGEGEVGPVTKKLYDLLTDI 276 (279)
T ss_pred CEEEEecceeEEEEEEEEccccccCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998 7788999999999999843
No 22
>PRK13357 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.6e-53 Score=423.47 Aligned_cols=279 Identities=25% Similarity=0.344 Sum_probs=237.6
Q ss_pred eeCCeecCCCCcccCCCccccccccceeEEEEEe---CC--eecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHH
Q 016536 97 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DG--YLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVS 171 (387)
Q Consensus 97 ~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~---~G--~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~ 171 (387)
|+||.+++.+.+.|++.||||+||||||||++++ +| ++|+|++|++||.+||++|+|+ +++.+.|+++|.++++
T Consensus 42 ~~nG~~vp~~~a~is~~Drg~~yGDGvFEtir~~~~~~G~~~~f~l~~Hl~RL~~Sa~~L~i~-~~~~~~l~~~i~~li~ 120 (356)
T PRK13357 42 WHDARLVPYGPLELDPAATVLHYGQEIFEGLKAYRHKDGSIVLFRPDANAKRLQRSADRLLMP-ELPEELFLEAVKQLVK 120 (356)
T ss_pred ccCCeEeeCCCceeCcccchhhhcceeeeeEEEEEcCCCcEeeeChHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHH
Confidence 6799999999999999999999999999999998 45 6899999999999999999996 6799999999999999
Q ss_pred hcCC--------CCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCC--CCCCeEEEEe-eeecC-CCCCCCccc-
Q 016536 172 ASNC--------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF--VSKGVKVITS-SIPIK-PPQFGTVKS- 238 (387)
Q Consensus 172 a~~~--------~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~--~~~Gv~l~~s-~~~~~-~p~~~~iKt- 238 (387)
+++. ..+++|+.+++|.+.+++.+.. .+.+++++.+.+... ..+|+++..+ ...+. ++.++++|+
T Consensus 121 ~n~~~~~~~~~~~~~~ir~~v~rg~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~v~l~~~~~~~r~~~~~l~~~Kt~ 198 (356)
T PRK13357 121 ADRDWVPPYGEGASLYLRPFMIATEPFLGVKPAE--EYIFCVIASPVGAYFKGGVKPVSIWVSDEYDRAAPGGTGAAKVG 198 (356)
T ss_pred hcccccCCCCCCccEEEEEEEEccCCcccccCCC--ccEEEEEEEechhhcccCCCceEEEEcCCeEecCCCCcchhhcc
Confidence 8863 2468999999987777765432 466776665443211 1257777766 55554 445689999
Q ss_pred cCChhhHHHHHHHHHcCCcEEEEEcC--CCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCcc
Q 016536 239 VNYLPNVLSKMEAEETGAFAAIWLDG--EGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKL 315 (387)
Q Consensus 239 ~NYl~~~la~~eA~~~G~de~L~ld~--~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~ 315 (387)
+||+.++++++||+++||||+||+|. +|+|+|++++|| |++++++++||+++ +||+||||+.|+++|+++ |+
T Consensus 199 ~nyl~~vla~~eA~~~G~deaL~ld~~~~G~V~E~s~sNl-F~v~~~~l~TPpl~~giL~GItR~~vlela~~~---Gi- 273 (356)
T PRK13357 199 GNYAASLLAQAEAKEKGCDQVLYLDAVEHTYIEEVGGMNF-FFITKDGTVTPPLSGSILPGITRDSLLQLAEDL---GL- 273 (356)
T ss_pred cccHHHHHHHHHHHHCCCCEEEEEcCCCCCEEEEcCcEEE-EEEECCEEEECCCCCCCCcchHHHHHHHHHHHC---CC-
Confidence 79999999999999999999999994 899999999999 55689999999995 799999999999999998 98
Q ss_pred ceEEEEEecHHh------HhcccEEEEEccccceEEEEEEC----CEEeCCCCchHHHHHHHHHHHHHhhcCCC----Cc
Q 016536 316 HGIKVGNVTVEE------GKKAEEMILLGSGVLVRPVVQWD----EQVIGNGKEGPIAQALLDLILEDMQSGPP----TV 381 (387)
Q Consensus 316 ~~V~Er~I~~~e------L~~adEvfltnT~~gv~PV~~id----~~~i~~g~~gpv~~~L~~~l~~~i~~g~~----~~ 381 (387)
+|+|+.|+++| |.+|||+|+|||+.+|+||.+|| ++.+++|++||++++|+++|.+ +..|.. .|
T Consensus 274 -~v~e~~i~~~el~~~~~L~~AdevFltnS~~gi~PV~~id~~~~~~~~~~g~~g~~t~~L~~~~~~-~~~~~~~~~~~w 351 (356)
T PRK13357 274 -TVEERPVSIDEWQADAASGEFTEAFACGTAAVITPIGGIKYKDKEFVIGDGEVGPVTQKLYDELTG-IQFGDVEDPHGW 351 (356)
T ss_pred -eEEEEecCHHHhhhhhccCcceEEEEcccccEEEEEEEEEeCCCEEEcCCCCCChHHHHHHHHHHH-HhcCCCCCCCCC
Confidence 99999999999 89999999999999999999998 4578888899999999999984 555532 35
Q ss_pred cccc
Q 016536 382 RVAV 385 (387)
Q Consensus 382 ~~~v 385 (387)
..+|
T Consensus 352 ~~~~ 355 (356)
T PRK13357 352 IVKV 355 (356)
T ss_pred cEeC
Confidence 5544
No 23
>PLN02259 branched-chain-amino-acid aminotransferase 2
Probab=100.00 E-value=2.9e-53 Score=425.81 Aligned_cols=278 Identities=22% Similarity=0.303 Sum_probs=234.5
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEe---CCee--cCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHH
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGYL--YELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTV 170 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~---~G~l--f~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv 170 (387)
.|.||.+++.+.+.+++.|++||||||||||||++ ||++ |++++|++||++||++|+|+.| +.++|.++|.+++
T Consensus 81 ~w~~g~ivp~~~~~i~~~drgl~YGdgvFEglkayr~~~G~i~lfr~~~h~~RL~~SA~rL~lp~~-~~e~~~~~i~~lv 159 (388)
T PLN02259 81 EFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSP-SVDQFVNAVKQTA 159 (388)
T ss_pred eEECCEEeEchhCeeCchhhHHHhhhhhhhcEEEEECCCCeEeecCcHHHHHHHHHhHHHhCCCCc-CHHHHHHHHHHHH
Confidence 36788888888999999999999999999999999 8977 8899999999999999999765 9999999999999
Q ss_pred HhcCC-------CCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCCCCCCeE---EEEe-eeecCC-CCCCCccc
Q 016536 171 SASNC-------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFVSKGVK---VITS-SIPIKP-PQFGTVKS 238 (387)
Q Consensus 171 ~a~~~-------~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~~~~Gv~---l~~s-~~~~~~-p~~~~iKt 238 (387)
++|+. ...|||+++.++.+.+++.|. ..+.+++++.+.+. .+..|++ +.++ ++.|.. +.++++|+
T Consensus 160 ~~n~~~vp~~~~~~lyiRp~v~g~~~~lG~~p~--~~~~~~i~~~p~~~-~~~~g~~~i~l~v~~~~~Ra~p~~~g~~K~ 236 (388)
T PLN02259 160 LANKRWVPPAGKGTLYIRPLLMGSGPILGLGPA--PEYTFIVYASPVGN-YFKEGMAALNLYVEEEYVRAAPGGAGGVKS 236 (388)
T ss_pred HhccccCCCCCCceEEEEEEEEecCCccCcCCC--CCcEEEEEEEechh-hhhcCcceEEEEeecceeccCCCCCcccch
Confidence 98874 235899888765444666654 35667666654331 1234554 4443 456654 46799998
Q ss_pred -cCChhhHHHHHHHHHcCCcEEEEEcC--CCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCc
Q 016536 239 -VNYLPNVLSKMEAEETGAFAAIWLDG--EGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGK 314 (387)
Q Consensus 239 -~NYl~~~la~~eA~~~G~de~L~ld~--~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~ 314 (387)
+||+++++++++|+++||||+||+|. +|+|+|++++|+ |++++++|+||+++ +||+||||++||++|+++ |+
T Consensus 237 ~~NY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNl-F~v~~~~l~TP~l~~~iL~GITR~sIl~la~~~---G~ 312 (388)
T PLN02259 237 ITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNV-FVVKGRTISTPATNGTILEGITRKSVMEIASDQ---GY 312 (388)
T ss_pred hhhHHHHHHHHHHHHHcCCCEEEEecCCCCCEEEEcCcEEE-EEEECCEEEcCCCcCCcCcCHHHHHHHHHHHHC---CC
Confidence 59999999999999999999999997 999999999999 55689999999995 799999999999999998 98
Q ss_pred cceEEEEEecHHhHhcccEEEEEccccceEEEEEECC--EE--eCCCCchHHHHHHHHHHHHHhhcCCCC----ccccc
Q 016536 315 LHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDE--QV--IGNGKEGPIAQALLDLILEDMQSGPPT----VRVAV 385 (387)
Q Consensus 315 ~~~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~id~--~~--i~~g~~gpv~~~L~~~l~~~i~~g~~~----~~~~v 385 (387)
+|+|+.|+++||.+|||+|+|||+.+|+||.+|+. +. ++.+ .||++++|+++|. +||+|..+ |.++|
T Consensus 313 --~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~~~~~~~~~~-~g~~t~~L~~~l~-~iq~G~~~~~~~W~~~~ 387 (388)
T PLN02259 313 --QVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYKTG-DESVCQKLRSVLV-GIQTGLIEDNKGWVTDI 387 (388)
T ss_pred --eEEEEECCHHHHHhCCEEEEcCCcceEEEEEEEecCCceEEeCCC-CCHHHHHHHHHHH-HHHcCCCCCCCCCeEEC
Confidence 99999999999999999999999999999999985 33 6654 5899999999998 99999863 66655
No 24
>PLN02883 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=1.1e-52 Score=420.63 Aligned_cols=285 Identities=22% Similarity=0.305 Sum_probs=235.0
Q ss_pred HHHhhCCCCccccchhhhhceeeeCCeecCCCCcccCCCccccccccceeEEEEEe---CCee--cCHHHHHHHHHHHHH
Q 016536 75 ERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGYL--YELDQHLDRIIRSAS 149 (387)
Q Consensus 75 ~~~~~~~~~~~~~~~~~a~y~~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~---~G~l--f~ld~Hl~RL~~Sa~ 149 (387)
++..+++|..++++|| +.+.++| .|++||||||||||||++ ||++ |++++|++||++||+
T Consensus 71 ~~~~~~~w~~~~i~p~--------~~l~l~p-------~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~SA~ 135 (384)
T PLN02883 71 KSCRDGNFEQGYLSRY--------GNIELNP-------AAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKIGAE 135 (384)
T ss_pred EEcCCCcccCCeEeeC--------CCcccCc-------cccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHHHHH
Confidence 4455678999999999 5655555 455669999999999998 6765 689999999999999
Q ss_pred HccCcCCCCHHHHHHHHHHHHHhcCC-------CCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCCCCC---Ce
Q 016536 150 MAKIQLPFDRKSLRRILIQTVSASNC-------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFVSK---GV 219 (387)
Q Consensus 150 ~l~i~~p~~~e~l~~~I~~lv~a~~~-------~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~~~~---Gv 219 (387)
+|+|+.+ +.+.|.++|.++++.|+. ...|||+.++++.+.+++.+. ..+.+++++.+.+. .+.. ++
T Consensus 136 rL~lp~~-~~e~~~~~i~~lv~~n~~wvp~~~~~~lYIRp~v~~~~~~lG~~~~--~~~~~~i~~~p~~~-y~~~g~~~v 211 (384)
T PLN02883 136 RMCMHSP-SVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLFGSGASLGVAAA--PEYTFLVFGSPVQN-YFKEGTAAL 211 (384)
T ss_pred HhCCCCc-CHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCC--CCeEEEEEEEeccc-ccccCcceE
Confidence 9999755 999999999999999864 346899999998776777643 35667666654431 1223 46
Q ss_pred EEEEee-eecC-CCCCCCcccc-CChhhHHHHHHHHHcCCcEEEEEcCC--CcEEeeCcceEEEEEeCCEEEecCCC-Cc
Q 016536 220 KVITSS-IPIK-PPQFGTVKSV-NYLPNVLSKMEAEETGAFAAIWLDGE--GFIAEGPNMNVAFVTKERLLLMPQFD-KI 293 (387)
Q Consensus 220 ~l~~s~-~~~~-~p~~~~iKt~-NYl~~~la~~eA~~~G~de~L~ld~~--G~V~Egs~sNv~fv~k~~~l~TP~~~-~i 293 (387)
++.+++ ++|. +++++++|++ ||++++++.++|+++||||+||+|.+ |+|+|++++||| ++++++|+||+++ +|
T Consensus 212 ~l~~~~~~~Ra~~~g~g~~K~~~nYa~~lla~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNlF-~v~~~~l~TP~l~~~i 290 (384)
T PLN02883 212 NLYVEEVIPRAYLGGTGGVKAISNYGPVLEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANIF-LVKGNIIVTPATSGTI 290 (384)
T ss_pred EEEECccccccCCCCCcccchhhhHHHHHHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEE-EEECCEEEeCCCcCCc
Confidence 665654 3564 4578999986 89999999999999999999999965 799999999995 5689999999995 79
Q ss_pred cccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcccEEEEEccccceEEEEEECCE--Ee--CCCCchHHHHHHHHH
Q 016536 294 LSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQ--VI--GNGKEGPIAQALLDL 369 (387)
Q Consensus 294 LpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~id~~--~i--~~g~~gpv~~~L~~~ 369 (387)
|+||||++||++|+++ |+ +|+|+.|+++||.+|||+|+|||+.+|+||.+|+++ .+ ..+ .||++++|++.
T Consensus 291 LpGITR~svl~la~~~---G~--~V~Er~i~~~eL~~AdEvF~tgTa~~I~PV~~I~~~~~~~~~~~~-~G~vt~~L~~~ 364 (384)
T PLN02883 291 LGGITRKSIIEIALDL---GY--KVEERRVPVEELKEAEEVFCTGTAAGVASVGSITFKNTRTEYKVG-DGIVTQQLRSI 364 (384)
T ss_pred CcCHHHHHHHHHHHHC---CC--eEEEEECCHHHHHhCCEeeeccChhheEEEEEEeccCceeecccC-CCHHHHHHHHH
Confidence 9999999999999998 98 999999999999999999999999999999999854 11 222 38999999999
Q ss_pred HHHHhhcCCC----CcccccC
Q 016536 370 ILEDMQSGPP----TVRVAVP 386 (387)
Q Consensus 370 l~~~i~~g~~----~~~~~v~ 386 (387)
|. +||+|.. .|.++|.
T Consensus 365 l~-~iq~G~~~d~~~W~~~~~ 384 (384)
T PLN02883 365 LL-GIQTGSIQDTKDWVLQIA 384 (384)
T ss_pred HH-HHHcCCCCCCCCCeEeCC
Confidence 98 9999976 4777763
No 25
>PRK09266 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-52 Score=400.04 Aligned_cols=258 Identities=17% Similarity=0.147 Sum_probs=224.5
Q ss_pred hceeeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHh
Q 016536 93 MYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSA 172 (387)
Q Consensus 93 ~y~~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a 172 (387)
|...|+||.+++.+.+. ++++|||||||||++++|++++|++|++||.+||+++.+ +|++.+.+.+++.++++
T Consensus 2 ~~~~~~nG~~~~~~~a~-----~~~~~GdgvFETir~~~g~~~~l~~Hl~RL~~sa~~l~~-~~~~~~~l~~~l~~~~~- 74 (266)
T PRK09266 2 MPLIELNGRPATAEDLA-----ALALANYGHFTSMQVRDGRVRGLDLHLQRLRRASRELFG-AALDDDRVRAQLRAALA- 74 (266)
T ss_pred ccEEEECCEECCHHHhh-----hHhhccceEEEEEEEECCEEcCHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHh-
Confidence 45689999999988875 499999999999999999999999999999999999975 57899999999999984
Q ss_pred cCCCCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCCCCCCeEEEEeeeecCCCCCCCccccCChhhHHHHHHHH
Q 016536 173 SNCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKMEAE 252 (387)
Q Consensus 173 ~~~~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~~~~Gv~l~~s~~~~~~p~~~~iKt~NYl~~~la~~eA~ 252 (387)
++..+++||+.+++|.|++++.+. ...+.+++.+.+.+ .....|+++.+++.++. .+++|+.||+.+++++++|+
T Consensus 75 ~~~~~~~ir~~v~r~~g~~~~~~~-~~~~~~~i~~~~~~-~~~~~~v~l~~~~~~r~---~~~~K~~~~l~~vla~~~a~ 149 (266)
T PRK09266 75 AGPADASVRVTVFAPDFDFRNPLA-DVAPDVLVATSPPA-DGPAGPLRLQSVPYERE---LPHIKHVGTFGQLHLRRLAQ 149 (266)
T ss_pred cCCCcEEEEEEEEecCcccCCCCC-CCCceEEEEEecCC-cCCCCCeEEEEEEeccc---CCCCCCCCcHHHHHHHHHHH
Confidence 456789999999998777665332 33456655544322 12357898888777653 46799999999999999999
Q ss_pred HcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCCCccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhccc
Q 016536 253 ETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFDKILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAE 332 (387)
Q Consensus 253 ~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~ad 332 (387)
++|+||+||+|++|+|+|++++|| |++++|+|+||+. +||+||||+.++++|+++ |+ +|+|+.|+++||.+||
T Consensus 150 ~~g~de~l~ln~~g~v~E~~~sNl-f~v~~~~l~TP~~-~~L~GItR~~ll~~~~~~---g~--~v~e~~i~~~eL~~ad 222 (266)
T PRK09266 150 RAGFDDALFVDPDGRVSEGATWNL-GFWDGGAVVWPQA-PALPGVTMALLQRGLERL---GI--PQRTRPVTLADLGRFA 222 (266)
T ss_pred HcCCCeEEEEcCCCcEEEcCceEE-EEEECCEEECCCC-CccchHHHHHHHHHHHHc---CC--eeEEEECCHHHHHHhh
Confidence 999999999999999999999999 5568999999985 799999999999999988 98 9999999999999999
Q ss_pred EEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHH
Q 016536 333 EMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLIL 371 (387)
Q Consensus 333 EvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~ 371 (387)
|+|+|||++||+||.+||++.++++ ||++++|++.|+
T Consensus 223 evfltnSl~gi~pV~~i~~~~~~~~--~~~~~~l~~~~~ 259 (266)
T PRK09266 223 GAFACNAWRGQRAVSAIDDVALPDS--HALLELLRRAYE 259 (266)
T ss_pred HhhhhcCccceEEEEEECCEECCCC--chHHHHHHHHHH
Confidence 9999999999999999999999754 899999999986
No 26
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.8e-50 Score=391.67 Aligned_cols=272 Identities=31% Similarity=0.452 Sum_probs=234.3
Q ss_pred eeeCCeecCCCCcccCCCccccccccceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCC
Q 016536 96 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 175 (387)
Q Consensus 96 ~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~ 175 (387)
.|+||.+++.....+++.||++|||+++|||+|+++|++|+|++|++||++||+.|+|+.|++.+.+..+...+++.++.
T Consensus 4 ~~~~g~~~~~~~~~~~~~~~~~~~g~~vFE~~r~~~g~~~~l~~H~~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (284)
T COG0115 4 IWVNGELVPEEDAKLSVLDRGLHYGDGVFETLRAYNGKLFRLDEHLARLKRSAKRLGLPRPESEEEIELLIQLLLAKNNL 83 (284)
T ss_pred EeECCEEccCcccccCcccceeccccceeEEEEEeCCcccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999888876
Q ss_pred CC-ceEEEEEEccCCceeecCCCCCCceEEEEEEecCCCC-C---CCCeEEEEeeeec-CCC-CCCCccccCChhhHHHH
Q 016536 176 RK-GSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF-V---SKGVKVITSSIPI-KPP-QFGTVKSVNYLPNVLSK 248 (387)
Q Consensus 176 ~~-g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~-~---~~Gv~l~~s~~~~-~~p-~~~~iKt~NYl~~~la~ 248 (387)
.. .|+|+.+..+.+..+..+ +..+.+.+.+.+.+... . ..|+.+.+++..| .++ ....+|++||+.+++++
T Consensus 84 ~~~~y~r~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~k~~~y~~~~~a~ 161 (284)
T COG0115 84 VPGLYIRPLVRGGGGGLGVRD--ATEPTLIVAASPVGAYLKGGRLEKGVVLVISSPVRRAPPGPGAAKKTGNYLSSVLAK 161 (284)
T ss_pred CCceEEEEEEEeecCCCCcCC--CCccEEEEEEEecccccCcccccCCeEEEEeehhhccCCCcchhhhhcccHHHHHHH
Confidence 65 578888777666666655 34566666555443211 1 3576666654333 333 24568899999999999
Q ss_pred HHHHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHh
Q 016536 249 MEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEE 327 (387)
Q Consensus 249 ~eA~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~e 327 (387)
++|+++|+||+|++|++|+|+|++++||||+..||+++||+++ +||+||||+.+|++|+++ |+ +|+|+.|+.+|
T Consensus 162 ~~A~~~G~~eal~~~~~G~V~Eg~~sNvf~v~~dg~~~TP~~~~~iL~GitR~~li~la~~~---G~--~v~E~~i~~~~ 236 (284)
T COG0115 162 REAKAAGADEALLLDEDGYVTEGAGSNVFFVKGDGVLVTPPLSGGILPGITRDSLLELAKEL---GL--TVEERPITLED 236 (284)
T ss_pred HHHHHCCCCEEEEecCCCeEEEcCcceEEEEEECCEEECCCCCCCccccHHHHHHHHHHHHc---Cc--eEEEeecCHHH
Confidence 9999999999999999999999999999665448899999996 799999999999999987 98 99999999999
Q ss_pred HhcccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHHHHHHHHhhcCC
Q 016536 328 GKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQSGP 378 (387)
Q Consensus 328 L~~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~~~l~~~i~~g~ 378 (387)
|..|||+|+|||+++|+||.++|++ . +++||++++|++.|. +++.|.
T Consensus 237 l~~adevf~t~t~~~v~PV~~i~~~-~--~~~gpit~~l~~~~~-~~~~~~ 283 (284)
T COG0115 237 LKQADEVFLTNTAAGVTPVGLIDGR-V--GQPGPVTKKLRELLT-DIQYGE 283 (284)
T ss_pred HhhCCEEEEEccceEEEEEEEECCc-c--CCCChHHHHHHHHHH-HHhccC
Confidence 9999999999999999999999888 4 789999999999998 777664
No 27
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-51 Score=394.44 Aligned_cols=281 Identities=36% Similarity=0.509 Sum_probs=234.0
Q ss_pred HHHHHHhhCCCCccccchhhhhceeeeCCeecCCCCcccCCCccccccccceeEEEEEeCC-----eecCHHHHHHHHHH
Q 016536 72 EAIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDG-----YLYELDQHLDRIIR 146 (387)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~a~y~~~~ng~~~~~~~~~ip~~D~g~~yG~gvFEtlrv~~G-----~lf~ld~Hl~RL~~ 146 (387)
++..++.+++|..++++|| +++.++|+++++ |||+|+||++|+|++ ++|++++|++||++
T Consensus 60 m~~~k~~~~gw~~~~I~p~--------gni~~~Paa~vl-------hy~~~lfEG~KAyRt~d~~i~LFrPd~N~~Rm~~ 124 (379)
T KOG0975|consen 60 MLTIKWSEDGWSQGEISPF--------GNLSLHPAAKVL-------HYGQGLFEGLKAYRTEDGKIRLFRPDQNMDRMLR 124 (379)
T ss_pred eEEEeccccCcCCCCccCc--------CCEeeChhhhce-------ecchhhccccccccCCCCeEEEecchhhHHHHHh
Confidence 4444555666999999999 899999999998 999999999999854 79999999999999
Q ss_pred HHHHccCcCCCCHHHHHHHHHHHHHhcCC-----CCc--eEEEEEEccCCceeecCCCCCCceEEEEEEecCCCCC----
Q 016536 147 SASMAKIQLPFDRKSLRRILIQTVSASNC-----RKG--SLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFV---- 215 (387)
Q Consensus 147 Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~-----~~g--~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~~~---- 215 (387)
||.++.|+ +++.+++.++|++++.+++. ..+ |||+.+..+ +..+....++.+.+|+++. |..++
T Consensus 125 sA~r~~lP-~p~~~e~ie~i~~lv~~~~~wVP~~~~~SLyirp~l~Gt--~~~Lgv~~~~e~~l~vi~s--pvg~yf~~g 199 (379)
T KOG0975|consen 125 SAERACLP-SPDVEEFIEAIKQLVLADKEWVPPPGKGSLYIRPLLIGT--DPVLGVSPAPEATLFVIVS--PVGPYFKSG 199 (379)
T ss_pred hhhhccCC-CCCHHHHHHHHHHHHHhcCcccCCCCCceEEEeeeeccC--CcccccccCCcceEEEEEc--ccchhcccc
Confidence 99999985 56889999999999998763 334 555555443 3333344556788887665 44432
Q ss_pred CCCeEEEEe-eeec-CCCCCCCcc-ccCChhhHHHHHHHHHcCCcEEEEEcCCC-cEEeeCcceEEEEEeCCE--EEecC
Q 016536 216 SKGVKVITS-SIPI-KPPQFGTVK-SVNYLPNVLSKMEAEETGAFAAIWLDGEG-FIAEGPNMNVAFVTKERL--LLMPQ 289 (387)
Q Consensus 216 ~~Gv~l~~s-~~~~-~~p~~~~iK-t~NYl~~~la~~eA~~~G~de~L~ld~~G-~V~Egs~sNv~fv~k~~~--l~TP~ 289 (387)
.+|+.+... ...| .++++++.| ++||++++++..||+++||+|+||||.++ +|+|++++||||+ ++|+ ++||+
T Consensus 200 ~~~v~L~v~~~~~Ra~pgg~g~~k~~~NY~P~vl~q~eA~~~G~~dvLwL~~d~~~ItEv~tmNiF~v-~~n~~elvTPp 278 (379)
T KOG0975|consen 200 FKGVNLLVDPEFVRAWPGGTGGVKLGGNYAPNVLAQKEAKSKGASDVLWLDGDGGYITEVGTMNIFMV-KKNEDELVTPP 278 (379)
T ss_pred ccceEEEEecceeecCCCCCCceeeccccchHHHHHHHHHhcCcceeEEEecCCCceeeccceeEEEE-EcCceeEecCC
Confidence 456776654 3444 456788878 78999999999999999999999999977 9999999999665 5665 99999
Q ss_pred CC-CccccHHHHHHHHHHHHhhhCC-ccceEEEEEecHHhHhcccEEEEEccccceEEEEEE---C----CEEeCCCCch
Q 016536 290 FD-KILSGCTAKRVLTLAKALVREG-KLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQW---D----EQVIGNGKEG 360 (387)
Q Consensus 290 ~~-~iLpGiTR~~vLela~~~~~~G-~~~~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~i---d----~~~i~~g~~g 360 (387)
++ .|||||||+++||+|+++ | + +|+||.++++|+.+|+|+|.|||+..|.||..| | ...+++|+.|
T Consensus 279 ~dg~ILpGvTR~sileLa~~~---g~~--~V~Er~vtv~e~~~A~Evf~tGTA~~v~pV~~i~~~~~~i~~~~~~~g~~g 353 (379)
T KOG0975|consen 279 LDGTILPGVTRKSILELARDL---GEF--KVEERDVTVDELKTADEVFCTGTAAVVSPVGSILYKDEKIHIPTIGEGKEG 353 (379)
T ss_pred CCCcccCCccHHHHHHHHHHh---Cce--EEEEEEEeHHHhhhhHhhhcccceeeeccccceeecccccceeecCCCCcc
Confidence 98 599999999999999999 7 7 999999999999999999999999999999776 3 3357888999
Q ss_pred HHHHHHHHHHHHHhhcCCC
Q 016536 361 PIAQALLDLILEDMQSGPP 379 (387)
Q Consensus 361 pv~~~L~~~l~~~i~~g~~ 379 (387)
|++++|+++|. +||+|..
T Consensus 354 ~l~~~l~~~l~-~iq~g~~ 371 (379)
T KOG0975|consen 354 PLAKKLLSTLT-DIQYGRE 371 (379)
T ss_pred HHHHHHHHHHH-HhhcCCc
Confidence 99999999998 9999954
No 28
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-IV, currently consists of proteins of about 270 to 415 amino-acid residues that share a few regions of sequence similarity. Surprisingly, the best conserved region does not include the lysine residue to which the pyridoxal-phosphate group is known to be attached, in ilvE, but is located some 40 residues at the C terminus side of the pyridoxal-phosphate-lysine. The D-amino acid transferases (D-AAT), which are among the members of this entry, are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity [, ]. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1EKV_A 2HGX_A 1EKP_A 1KTA_B 1KT8_B 2A1H_B 2HDK_A 2HGW_B 1EKF_B 2HG8_A ....
Probab=100.00 E-value=3.5e-42 Score=322.27 Aligned_cols=224 Identities=34% Similarity=0.482 Sum_probs=177.7
Q ss_pred cCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcC-CCCceEEEEEEccCCceeecCCCCCCceEEEEEEecCCC
Q 016536 135 YELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASN-CRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP 213 (387)
Q Consensus 135 f~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~-~~~g~iR~~v~~G~g~~~~~p~~~~~~~~~~~v~~~p~~ 213 (387)
|+|++|++||.+||+.+ +.++++.+.+++++.++++.++ ..+++||+++++|.+.++..+..+..+. ......+..
T Consensus 1 f~l~~Hl~Rl~~S~~~l-~~~~~~~~~l~~~i~~~~~~~~~~~~~~ir~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~ 77 (231)
T PF01063_consen 1 FFLDEHLERLRRSARAL-IGLPFSREELREIIQELLEANPDQGEGYIRITVTRGGGPLGGSPPENSAPP--PFSIAPPRR 77 (231)
T ss_dssp ETHHHHHHHHHHHHHHT-TTHSSHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETSSSSSSSECSEEEEE--EEEEETCHH
T ss_pred CCHHHHHHHHHHHHHHH-ccCCcCHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCCcCccCccccccc--ccccccccc
Confidence 78999999999999999 6778999999999999999988 6788999999999877655543322211 111111111
Q ss_pred CC--CCC-eEEEEeeeec-CCCCCCCccccCChhhHH-HHHHHHHcCCcEEEEEcCCCcEEeeCcceEEEEEeCCEEEec
Q 016536 214 FV--SKG-VKVITSSIPI-KPPQFGTVKSVNYLPNVL-SKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMP 288 (387)
Q Consensus 214 ~~--~~G-v~l~~s~~~~-~~p~~~~iKt~NYl~~~l-a~~eA~~~G~de~L~ld~~G~V~Egs~sNv~fv~k~~~l~TP 288 (387)
.. ... ..+.....+. ..+.++++|+.||+.+++ +.++|+++|+||+|++|++|+|+|++++|| |++++|+|+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kt~~~~~~~~~~~~~a~~~g~de~ll~d~~G~v~E~~~sNi-f~~~~~~~~TP 156 (231)
T PF01063_consen 78 PPPPLVGSVGVRRASPPLPRPNPLPRHKTTNRLANVLAALRAAREKGADEALLLDEDGNVTEGSTSNI-FFVKDGTLYTP 156 (231)
T ss_dssp HHEEEEEECSEECETTTSE-TTTSTTS-BSHHHHHHHHHHHHHHHTTSSEEEEEETTSBEEEESSSEE-EEEETTEEEEE
T ss_pred CCcceeeeeeEEeccccccccCCCCCeeECCcchhhHHHHHHHHhcCcchhheecCCCCcCCCCCccc-ccccCCEEEcC
Confidence 00 000 0111111111 122478999999999999 666677899999999999999999999999 56699999999
Q ss_pred CCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcccEEEEEccccceEEEEEECCEEeCCCCchHHHHHHH
Q 016536 289 QFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALL 367 (387)
Q Consensus 289 ~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~id~~~i~~g~~gpv~~~L~ 367 (387)
+.+ |||+||||+.++++++++ |+ +|+|+.++++||.+|||+|+|||++||+||.+||++.++ .||++++|+
T Consensus 157 ~~~~giL~Gitr~~ll~~~~~~---g~--~v~e~~i~~~~L~~ade~fl~ns~~gi~pV~~i~~~~~~---~~p~~~~L~ 228 (231)
T PF01063_consen 157 PLDSGILPGITRQLLLELAKEL---GI--PVEERPITLDDLQQADEVFLTNSLRGIRPVKSIDGRSFG---PGPITRRLQ 228 (231)
T ss_dssp SGSSSSB--HHHHHHHHHHHHT---TS--EEEEE-BBHHHHHTHSEEEEEETTTEEEEEEEETTEEST---THHHHHHHH
T ss_pred ChhhhhccHHHHHHHHHHHHhC---CC--CcEEEEeCHHHhhhhhheEEecchhhEEEEEEECCEECC---CCHHHHHHH
Confidence 996 699999999999999998 98 999999999999999999999999999999999999997 799999999
Q ss_pred HHH
Q 016536 368 DLI 370 (387)
Q Consensus 368 ~~l 370 (387)
++|
T Consensus 229 ~~~ 231 (231)
T PF01063_consen 229 EAY 231 (231)
T ss_dssp HHH
T ss_pred HhC
Confidence 986
No 29
>PRK07546 hypothetical protein; Provisional
Probab=100.00 E-value=6.3e-40 Score=304.55 Aligned_cols=202 Identities=20% Similarity=0.179 Sum_probs=169.2
Q ss_pred cceeEEEEEe-CCeecCHHHHHHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCceeecCCCCC
Q 016536 121 HGVFDTAAIC-DGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQLSPVGCH 199 (387)
Q Consensus 121 ~gvFEtlrv~-~G~lf~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~lv~a~~~~~g~iR~~v~~G~g~~~~~p~~~~ 199 (387)
.++|||++++ +|++++|++|++||.+||+.|+++ ++.+.+++.+.++++++ ...+.+|+.+++| |.
T Consensus 4 ~~lfETi~~~~~G~~~~l~~Hl~RL~~sa~~l~~~--~~~~~l~~~l~~~~~~~-~~~~~vrl~~~~~-g~--------- 70 (209)
T PRK07546 4 FELIETLRWEPGAGFPRLDRHLARLERSARALGFP--CDPAAVRAKLAEAVAGA-QGPLRLRLTLARD-GR--------- 70 (209)
T ss_pred ccEEEEEEEeCCCCcccHHHHHHHHHHHHHHhCCC--CCHHHHHHHHHHHhhcc-CCCeEEEEEEcCC-CC---------
Confidence 4799999999 999999999999999999999984 56788999999998764 3456788888875 22
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEeeeecC-CCCCCCccccCChhhHHHHHHHHHcCCcEEEEEcCCCcEEeeCcceEEE
Q 016536 200 QSTFYVIVIQDDSPFVSKGVKVITSSIPIK-PPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAF 278 (387)
Q Consensus 200 ~~~~~~~v~~~p~~~~~~Gv~l~~s~~~~~-~p~~~~iKt~NYl~~~la~~eA~~~G~de~L~ld~~G~V~Egs~sNv~f 278 (387)
+++.+.+.+..+...++++.++..++. ++.+.++|+.||+.+++++++|+++|+||+|++|++|+|+||+++|| |
T Consensus 71 ---~~i~~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~Kt~nr~~~v~a~~~a~~~g~de~l~l~~~G~v~E~s~~Ni-~ 146 (209)
T PRK07546 71 ---LTVETAPLPPLPPDTVWRVAIARTRLDSADPLLRYKTTRRAAYDAARAELPPAEADEVILLNERGEVCEGTITNV-F 146 (209)
T ss_pred ---EEEEEecCCCCCCCCcEEEEEcCcccCCCCcchhcccCChHHHHHHHHHHhhCCCCEEEEECCCCcEEEcCceeE-E
Confidence 223333332222345677777766654 34567899999999999999999999999999999999999999999 5
Q ss_pred EEeCCEEE-ecCCC-CccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcccEEEEEccccceEEEEEE
Q 016536 279 VTKERLLL-MPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQW 349 (387)
Q Consensus 279 v~k~~~l~-TP~~~-~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~adEvfltnT~~gv~PV~~i 349 (387)
++++++|+ ||+++ ++|+||||+.+++. + .|+|+.|+++||.+|||+|+|||++||+||..|
T Consensus 147 ~~~~~~~~~TP~~~~g~L~Gi~R~~ll~~-------~---~v~e~~i~~~~L~~adevfl~NSl~gv~pV~~~ 209 (209)
T PRK07546 147 LDRGGGMLTTPPLSCGLLPGVLRAELLDA-------G---RAREAVLTVDDLKSARAIWVGNSLRGLIRAELI 209 (209)
T ss_pred EEECCEEEECCCCcCCCCccHHHHHHHhh-------C---CeEEEEcCHHHHhhCCEEEEEccceeEEEEEEC
Confidence 56899999 99985 79999999999983 2 699999999999999999999999999999764
No 30
>PRK07101 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=249.52 Aligned_cols=183 Identities=20% Similarity=0.213 Sum_probs=144.1
Q ss_pred cceeEEEEEeCCeecCHHHHHHHHHHHHHHccCcC-CCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCceeecCCCCC
Q 016536 121 HGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQL-PFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQLSPVGCH 199 (387)
Q Consensus 121 ~gvFEtlrv~~G~lf~ld~Hl~RL~~Sa~~l~i~~-p~~~e~l~~~I~~lv~a~~~~~g~iR~~v~~G~g~~~~~p~~~~ 199 (387)
.++||||++++|++++|++|++||.+||+.+++.. |++.+.+.+.+.++ .++.+|+.++.+.|.+.+...
T Consensus 3 ~~l~ETir~~~g~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~------~~~~~r~rl~~~~g~~~~~~~--- 73 (187)
T PRK07101 3 FPLFETIAIEDGEIQNLSYHQQRYERTLAEFYGKEAPFDLAEIIQPPTEL------QEGLVRCRIDYNAEIYQVQYF--- 73 (187)
T ss_pred CcceEEEeeeCCeeccHHHHHHHHHHHHHHHcccCCcccHHHHhhchhhh------cCCCEEEEEEecCCcEEEEEE---
Confidence 36999999999999999999999999999998766 88999888887654 245567766666654433211
Q ss_pred CceEEEEEEecCCCC-CCCCeEEEEeeeecCCCCCCCccccCChhhHHHHHHHHHcCCcEEEEEcCCCcEEeeCcceEEE
Q 016536 200 QSTFYVIVIQDDSPF-VSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAF 278 (387)
Q Consensus 200 ~~~~~~~v~~~p~~~-~~~Gv~l~~s~~~~~~p~~~~iKt~NYl~~~la~~eA~~~G~de~L~ld~~G~V~Egs~sNv~f 278 (387)
|+.+ ...|++++.++.. ...+|+.||. .+....|++.|+||+|++| +|+|+||+++|| |
T Consensus 74 -----------~~~~~~~~~~~~~~~~~~-----~~~~Kt~~r~--~~~~~~a~~~g~de~l~~~-~G~v~E~~~sNi-~ 133 (187)
T PRK07101 74 -----------PYQRRPIRSFQPVYCDDI-----DYSLKYTDRS--ALNELFAQKGECDEIIIIK-NGLVTDTSIGNL-A 133 (187)
T ss_pred -----------cCCCCCcCceEEEecCCc-----ccccccCCHH--HHHHHHHHhCCCCEEEEEc-CCEEEEccceEE-E
Confidence 2111 2347777644321 3378999873 3344455678999999998 899999999999 5
Q ss_pred EEeCCEEEecCCCCccccHHHHHHHHHHHHhhhCCccceEEEEEecHHhHhcccEEEEEccccce
Q 016536 279 VTKERLLLMPQFDKILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLV 343 (387)
Q Consensus 279 v~k~~~l~TP~~~~iLpGiTR~~vLela~~~~~~G~~~~V~Er~I~~~eL~~adEvfltnT~~gv 343 (387)
+++||+|+||+ .++|+||||+.+++. | +|+|+.|+++||.+|||+|+|||++|.
T Consensus 134 ~~~~~~~~TP~-~~~L~Gi~R~~ll~~-------~---~v~e~~i~~~~L~~ad~~~~~nsl~G~ 187 (187)
T PRK07101 134 FFDGKQWFTPK-KPLLKGTQRARLLDE-------G---KIKEKDITVEDLLQYEEIRLINAMNGF 187 (187)
T ss_pred EEECCEEEcCC-CCCccHHHHHHHHcc-------C---CEEEEecCHHHHhcCCEEEEEecccCC
Confidence 56899999999 589999999999973 5 699999999999999999999999873
Done!