Query 016543
Match_columns 387
No_of_seqs 91 out of 93
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 15:20:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016543.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016543hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1btea_ g.7.1.3 (A:) Type II a 37.8 7.5 0.00054 30.2 2.2 22 165-188 32-53 (96)
2 d2h62d1 g.7.1.3 (D:8-98) Type 25.8 15 0.0011 28.2 2.1 22 165-188 31-52 (91)
3 d2byoa1 b.125.1.3 (A:20-207) P 22.1 48 0.0035 27.2 4.8 76 181-268 64-143 (188)
4 d1ypra_ d.110.1.1 (A:) Profili 21.7 12 0.00087 29.0 0.7 62 191-268 20-83 (125)
5 d1kjna_ c.115.1.1 (A:) Hypothe 15.1 38 0.0028 28.2 2.4 37 81-134 6-48 (152)
6 d1b2pa_ b.78.1.1 (A:) Lectin ( 14.5 94 0.0068 23.4 4.5 60 131-201 22-85 (119)
7 d1fi4a1 d.14.1.5 (A:3-190) Mev 14.5 30 0.0022 29.0 1.6 14 163-176 156-169 (188)
8 d2i74a1 b.18.1.29 (A:472-651) 14.2 45 0.0033 28.1 2.7 40 164-203 101-156 (180)
9 d1tdja3 d.58.18.2 (A:424-514) 12.4 39 0.0029 25.3 1.6 42 214-255 18-69 (91)
10 d1v66a_ a.140.2.1 (A:) p53 bin 11.1 52 0.0038 24.0 1.8 18 70-87 13-30 (65)
No 1
>d1btea_ g.7.1.3 (A:) Type II activin receptor {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.83 E-value=7.5 Score=30.25 Aligned_cols=22 Identities=32% Similarity=0.798 Sum_probs=17.6
Q ss_pred ccceEEEeeeCCCCeEEEEEeeCc
Q 016543 165 ESGCFVLWQMLPGMWSLELVVGGN 188 (387)
Q Consensus 165 e~G~FVlWQ~~Pd~W~~ELvv~G~ 188 (387)
..+||+||+..++. +++++-|+
T Consensus 32 ~~~Cf~lW~~~~g~--~~i~~qGC 53 (96)
T d1btea_ 32 RRHCFATWKNISGS--IEIVKQGC 53 (96)
T ss_dssp CCEEEEEEEEETTE--EEEEEEEE
T ss_pred cCceEEecccCCCC--EEEEEecC
Confidence 46899999999987 66666666
No 2
>d2h62d1 g.7.1.3 (D:8-98) Type II activin receptor {Mouse (Mus musculus), isoform IIB [TaxId: 10090]}
Probab=25.81 E-value=15 Score=28.20 Aligned_cols=22 Identities=32% Similarity=0.684 Sum_probs=18.2
Q ss_pred ccceEEEeeeCCCCeEEEEEeeCc
Q 016543 165 ESGCFVLWQMLPGMWSLELVVGGN 188 (387)
Q Consensus 165 e~G~FVlWQ~~Pd~W~~ELvv~G~ 188 (387)
...||+||+..++- ++|+.-|+
T Consensus 31 ~~~Cy~lW~~~~~~--i~i~~qGC 52 (91)
T d2h62d1 31 RLHCYASWRNSSGT--IELVKKGC 52 (91)
T ss_dssp CEEEEEEEEEETTE--EEEEEEEE
T ss_pred CCccEEEeecCCCC--EEEEEecc
Confidence 46799999999877 77777777
No 3
>d2byoa1 b.125.1.3 (A:20-207) Putative lipoprotein LppX {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.08 E-value=48 Score=27.21 Aligned_cols=76 Identities=16% Similarity=0.183 Sum_probs=48.3
Q ss_pred EEEEeeCceEEeccCCceeeecCCCCcCcccCCCCChhhhhhhcCCccc-eecc---eeceeeeceeeeCCcceeEEEee
Q 016543 181 LELVVGGNKVIAGSDGKTVWRHTPWLGTHAAKGPQRPLRRIIQGLDPKI-TASL---FAKAQCLGEKRIGDDECFVLKVA 256 (387)
Q Consensus 181 ~ELvv~G~Kv~AGsdGkvaWRhTpw~g~HAakGp~RPLRR~lQGLDPr~-ta~l---F~~A~ciGEk~i~gedCFvLkl~ 256 (387)
+|.++-|.++-+..+++ |..-+ ..+.+ -.-.=|||-. +++| +.++..+|++.|||..|.-+.-.
T Consensus 64 ~~~v~~d~~~Y~~~~~~--w~~~~------~~~~~----d~~~~ldP~~gl~~lLa~~~d~~~~G~EtvdG~~t~~~tgt 131 (188)
T d2byoa1 64 VPFRVQGDNISVKLFDD--WSNLG------SISEL----STSRVLDPAAGVTQLLSGVTNLQAQGTEVIDGISTTKITGT 131 (188)
T ss_dssp EEEEEETTEEEEEETTE--EEEEE------EHHHH----HHHTC-----CCCCCSTTCEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEECCEEEEcCCCc--hhhcC------ccccC----CHhhhcChhHhHHHHhhhcCCceeccceEECCEEEEEEEEE
Confidence 88899888888887654 43211 01111 1112357765 3443 56789999999999999999999
Q ss_pred cchhhhhhccCC
Q 016543 257 ADRAAVMERSEG 268 (387)
Q Consensus 257 a~~~~l~arS~~ 268 (387)
.+.+.+..=..+
T Consensus 132 v~~~~~~~~~~~ 143 (188)
T d2byoa1 132 IPASSVKMLDPG 143 (188)
T ss_dssp ECHHHHHHHCTT
T ss_pred eCHHHHHhhccc
Confidence 998888765443
No 4
>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.71 E-value=12 Score=29.03 Aligned_cols=62 Identities=23% Similarity=0.452 Sum_probs=37.1
Q ss_pred EeccCCceeeecCCCCcCcccCCCCCh--hhhhhhcCCccceecceeceeeeceeeeCCcceeEEEeecchhhhhhccCC
Q 016543 191 IAGSDGKTVWRHTPWLGTHAAKGPQRP--LRRIIQGLDPKITASLFAKAQCLGEKRIGDDECFVLKVAADRAAVMERSEG 268 (387)
Q Consensus 191 ~AGsdGkvaWRhTpw~g~HAakGp~RP--LRR~lQGLDPr~ta~lF~~A~ciGEk~i~gedCFvLkl~a~~~~l~arS~~ 268 (387)
+.|-||.-+|-.||-. ++-| ++..+..++..+ .++.+- =.++|+.|++|+-+ +..+.+|.+.
T Consensus 20 I~g~dg~svwA~S~gf-------~~~~~E~~~i~~~f~~~~--~~~~~G-----i~i~G~KY~~~~~d--~~~i~~kk~~ 83 (125)
T d1ypra_ 20 IYSRAGDAVWATSGGL-------SLQPNEIGEIVQGFDNPA--GLQSNG-----LHIQGQKFMLLRAD--DRSIYGRHDA 83 (125)
T ss_dssp EEETTSCCEEEEESCC-------CCCHHHHHHHHHHTTCTH--HHHHHC-----EEETTEEEEEEEEC--SSEEEEEETT
T ss_pred EEeCCCCeeEEECCCC-------CCCHHHHHHHHHHhcCcc--hhccCC-----EEEcCeEEEEEecC--CCeEEEEeCC
Confidence 6778998889999843 2333 455555553321 222221 24679999999844 4456666554
No 5
>d1kjna_ c.115.1.1 (A:) Hypothetical protein MTH777 (MT0777) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=15.09 E-value=38 Score=28.18 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=25.5
Q ss_pred hhhCCCcccccCCCCCCccCCcCCCccccchhHHHHHHHHHh------hCchhhhhhhhh
Q 016543 81 GVLGCPLAPIPLVNDPILRIHIKDIPIETSSAHYIIQQYLAA------TGCLKQQKRAKN 134 (387)
Q Consensus 81 gVvGaPL~P~pV~~~~~~~~~iKd~pIe~SsA~YIvqQY~AA------tGg~k~~~~v~s 134 (387)
=+||||=+|++ +|+|=|+..++... +|-.+|++-+++
T Consensus 6 ilLGCPe~Pvq-----------------~~~~lyl~~~Lk~kG~~v~Va~npAA~kLiev 48 (152)
T d1kjna_ 6 MVLGCPESPVQ-----------------IPLAIYTSHKLKKKGFRVTVTANPAALRLVQV 48 (152)
T ss_dssp EECCCSCSTTH-----------------HHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred EEecCCCCcch-----------------hHHHHHHHHHHHhcCCceEEecCHHHHhHhhh
Confidence 47899998887 57888888887654 244555555544
No 6
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}
Probab=14.54 E-value=94 Score=23.42 Aligned_cols=60 Identities=17% Similarity=0.247 Sum_probs=39.7
Q ss_pred hhhhhhhccceeeEEEeeeccCCccccccCCcccccceEEEeeeCCCCe----EEEEEeeCceEEeccCCceeee
Q 016543 131 RAKNMYATGTVKMVCCETEISSGKNVKSLGTRSGESGCFVLWQMLPGMW----SLELVVGGNKVIAGSDGKTVWR 201 (387)
Q Consensus 131 ~v~smya~GkVrM~~se~~~~~~~~v~~~g~~~~e~G~FVlWQ~~Pd~W----~~ELvv~G~Kv~AGsdGkvaWR 201 (387)
++..+|+.|+-|+.+- .+|.-|- -.++.++|+.+..-. .+.|--.|.-|.--.+|++.|+
T Consensus 22 ~l~~~~~~~~y~l~mQ----~DGNLVL-------y~~~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~~vWs 85 (119)
T d1b2pa_ 22 SLEILFGTHVYRFIMQ----TDCNLVL-------YDNNNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQ 85 (119)
T ss_dssp EEEEEETTEEEEEEEC----TTSCEEE-------EETTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEE
T ss_pred eEEEecCCceEEEEEC----CCCcEEE-------EECCeEEEEecCCCCCcceEEEEEeCCCEEEECCCCcEEEE
Confidence 3456788888877743 3343331 124567898876543 3445557888888999999995
No 7
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=14.51 E-value=30 Score=28.96 Aligned_cols=14 Identities=29% Similarity=0.518 Sum_probs=11.7
Q ss_pred ccccceEEEeeeCC
Q 016543 163 SGESGCFVLWQMLP 176 (387)
Q Consensus 163 ~~e~G~FVlWQ~~P 176 (387)
++--||||+|++.+
T Consensus 156 RSi~Gg~v~W~~g~ 169 (188)
T d1fi4a1 156 RSLFGGYVAWEMGK 169 (188)
T ss_dssp GGGSSSEEEEECCS
T ss_pred hhhcCCeeEeccCC
Confidence 46889999999764
No 8
>d2i74a1 b.18.1.29 (A:472-651) Peptide:N-glycanase, PNGase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.20 E-value=45 Score=28.09 Aligned_cols=40 Identities=23% Similarity=0.503 Sum_probs=27.4
Q ss_pred cccceEEEeeeCCCCeEEEEEee----------C-ce--E---EeccCCceeeecC
Q 016543 164 GESGCFVLWQMLPGMWSLELVVG----------G-NK--V---IAGSDGKTVWRHT 203 (387)
Q Consensus 164 ~e~G~FVlWQ~~Pd~W~~ELvv~----------G-~K--v---~AGsdGkvaWRhT 203 (387)
...+|=|.|+..-+.=|+++.-+ | .| + .+|.||.+||-|+
T Consensus 101 tf~~G~v~~~~~~~~~~~~i~~d~~~~~~~~~~ga~~~~i~a~LsGG~g~~aWQHa 156 (180)
T d2i74a1 101 SFESGSVRWKLRSETAQVNLLGDKNLRSYNDFSGATEVTLEAELSRGDGDVAWQHT 156 (180)
T ss_dssp ECTTCEEEEEEECSSCEEEECCBSCCEEECTTTTCSEEEEEEEEECCCGGGGGGSE
T ss_pred EECCCEEEEEEEcCCceEEecCCCceeEecCcCCCeEEEEEEEEeCCCccccchhh
Confidence 34577788888777777776532 2 12 2 4688999999886
No 9
>d1tdja3 d.58.18.2 (A:424-514) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=12.36 E-value=39 Score=25.33 Aligned_cols=42 Identities=21% Similarity=0.248 Sum_probs=22.3
Q ss_pred CCCh--hhhhhhcCCccceecceec--------eeeeceeeeCCcceeEEEe
Q 016543 214 PQRP--LRRIIQGLDPKITASLFAK--------AQCLGEKRIGDDECFVLKV 255 (387)
Q Consensus 214 p~RP--LRR~lQGLDPr~ta~lF~~--------A~ciGEk~i~gedCFvLkl 255 (387)
|.|| |++|++-|.|+.--+.|.= ...||-..-+.++++.=+|
T Consensus 18 PErpGal~~Fl~~l~~~~nITeF~YR~~~~~~a~VlvGi~~~~~~~~l~~~L 69 (91)
T d1tdja3 18 PESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRL 69 (91)
T ss_dssp CCCTTHHHHHHHHHCSCCCCCEEECBCTTTCSSCEEEEEC------------
T ss_pred CCCccHHHHHHHHhCCCCcEEEEEEeecCCCeeeEEEEEecCchhHHHHHHH
Confidence 7888 9999999999865566642 1556666666666554333
No 10
>d1v66a_ a.140.2.1 (A:) p53 binding domain of protein inhibitor of activated STAT protein 1, PIAS-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.06 E-value=52 Score=23.95 Aligned_cols=18 Identities=28% Similarity=0.442 Sum_probs=14.9
Q ss_pred cCchhhHHHHHhhhCCCc
Q 016543 70 PAKRQDLRLLLGVLGCPL 87 (387)
Q Consensus 70 ~~~~~dlrlLLgVvGaPL 87 (387)
..+-+|||.|||-.|..=
T Consensus 13 sfRVsELQ~LLg~~gr~K 30 (65)
T d1v66a_ 13 SLRVSELQVLLGYAGRNK 30 (65)
T ss_dssp TCCHHHHHHHHHTTCCCC
T ss_pred HHhHHHHHHHHHHcCCCC
Confidence 357799999999999753
Done!