Query 016552
Match_columns 387
No_of_seqs 251 out of 2618
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 15:29:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016552.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016552hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 1.3E-36 4.3E-41 280.8 33.0 253 84-371 17-289 (302)
2 1zgk_A Kelch-like ECH-associat 100.0 1.8E-36 6.1E-41 280.8 32.5 255 84-371 26-299 (308)
3 3ii7_A Kelch-like protein 7; p 100.0 2.6E-36 8.8E-41 279.2 32.0 246 84-366 13-277 (306)
4 2vpj_A Kelch-like protein 12; 100.0 3.9E-36 1.3E-40 277.3 31.5 253 84-370 16-289 (301)
5 4asc_A Kelch repeat and BTB do 100.0 5E-36 1.7E-40 278.6 26.6 241 101-367 14-283 (315)
6 2woz_A Kelch repeat and BTB do 100.0 8E-35 2.7E-39 270.8 25.8 242 101-369 25-295 (318)
7 4asc_A Kelch repeat and BTB do 100.0 2.5E-33 8.5E-38 260.4 24.0 218 101-345 68-305 (315)
8 2uvk_A YJHT; unknown function, 100.0 8.3E-33 2.9E-37 261.2 27.1 252 84-366 21-347 (357)
9 2woz_A Kelch repeat and BTB do 100.0 3.5E-33 1.2E-37 259.7 22.7 217 101-344 79-314 (318)
10 2xn4_A Kelch-like protein 2; s 100.0 2.1E-32 7.3E-37 252.4 26.4 229 84-340 63-302 (302)
11 3ii7_A Kelch-like protein 7; p 100.0 5.6E-32 1.9E-36 250.1 27.1 248 63-337 29-294 (306)
12 1zgk_A Kelch-like ECH-associat 100.0 1E-31 3.5E-36 248.7 26.7 219 137-370 15-251 (308)
13 2vpj_A Kelch-like protein 12; 100.0 3.7E-31 1.3E-35 243.9 26.9 246 62-337 35-300 (301)
14 2uvk_A YJHT; unknown function, 100.0 2.7E-30 9.2E-35 244.0 28.3 217 137-371 10-306 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 6.3E-29 2.1E-33 253.9 25.2 236 84-346 399-674 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 7.8E-28 2.7E-32 245.8 26.8 214 136-366 388-640 (695)
17 1k3i_A Galactose oxidase precu 99.9 1.3E-26 4.3E-31 236.2 17.3 267 67-366 175-502 (656)
18 1k3i_A Galactose oxidase precu 99.9 1.6E-24 5.5E-29 220.6 20.1 236 84-346 255-530 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 99.2 2.8E-09 9.5E-14 102.6 25.8 186 142-358 164-349 (445)
20 1p22_A F-BOX/WD-repeat protein 99.2 1.9E-09 6.6E-14 103.5 19.7 281 40-358 8-326 (435)
21 3v7d_B Cell division control p 99.1 1.8E-08 6.1E-13 97.2 24.1 187 147-358 173-382 (464)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 98.7 4.8E-09 1.7E-13 69.2 2.4 42 39-80 5-49 (53)
23 3dsm_A Uncharacterized protein 98.7 4.9E-06 1.7E-10 76.7 22.7 215 100-358 64-303 (328)
24 3dsm_A Uncharacterized protein 98.6 3.3E-05 1.1E-09 71.0 26.6 178 163-358 16-213 (328)
25 2e31_A FBS1, F-box only protei 98.6 1.1E-08 3.8E-13 91.8 1.8 46 36-81 44-93 (297)
26 3mbr_X Glutamine cyclotransfer 98.5 2.9E-05 1E-09 67.8 20.7 151 190-358 25-180 (243)
27 2iwa_A Glutamine cyclotransfer 98.3 0.00015 5.1E-09 64.4 21.8 196 140-358 24-238 (266)
28 3mbr_X Glutamine cyclotransfer 98.3 0.00061 2.1E-08 59.4 25.1 196 138-356 22-234 (243)
29 3nol_A Glutamine cyclotransfer 98.3 0.00012 4.2E-09 64.4 19.6 193 140-356 46-255 (262)
30 1l0q_A Surface layer protein; 98.3 6.5E-05 2.2E-09 70.1 19.2 179 148-358 3-190 (391)
31 3nol_A Glutamine cyclotransfer 98.3 0.0001 3.5E-09 64.9 18.8 149 192-358 49-202 (262)
32 1rwi_B Serine/threonine-protei 98.3 0.0003 1E-08 61.9 22.4 185 146-358 77-265 (270)
33 3vgz_A Uncharacterized protein 98.2 0.00051 1.8E-08 62.7 23.5 188 147-358 101-304 (353)
34 3jrp_A Fusion protein of prote 98.2 0.00049 1.7E-08 63.4 23.3 191 146-358 22-241 (379)
35 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00049 1.7E-08 64.1 23.0 164 165-355 199-376 (376)
36 1l0q_A Surface layer protein; 98.2 9.8E-05 3.4E-09 68.9 18.1 179 148-358 45-234 (391)
37 1rwi_B Serine/threonine-protei 98.1 0.00025 8.4E-09 62.5 19.4 185 146-358 34-223 (270)
38 3nok_A Glutaminyl cyclase; bet 98.1 0.00028 9.7E-09 62.2 18.7 148 190-358 59-211 (268)
39 3nok_A Glutaminyl cyclase; bet 98.1 0.00068 2.3E-08 59.7 20.8 191 138-355 56-264 (268)
40 2iwa_A Glutamine cyclotransfer 98.1 0.00048 1.6E-08 61.1 19.9 152 190-358 25-182 (266)
41 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.00085 2.9E-08 62.4 21.7 197 141-367 48-266 (376)
42 2z2n_A Virginiamycin B lyase; 98.0 0.0023 7.9E-08 56.8 23.4 181 146-356 67-254 (299)
43 1q7f_A NHL, brain tumor CG1071 98.0 0.0013 4.5E-08 58.4 21.7 188 146-358 88-281 (286)
44 3bws_A Protein LP49; two-domai 98.0 0.00045 1.5E-08 65.3 19.4 187 146-358 133-335 (433)
45 1p22_A F-BOX/WD-repeat protein 98.0 0.0012 4E-08 62.8 22.0 191 140-358 176-366 (435)
46 2ovr_B FBW7, F-BOX/WD repeat p 98.0 0.0014 4.7E-08 62.4 22.6 174 165-358 260-443 (445)
47 1npe_A Nidogen, entactin; glyc 98.0 0.0033 1.1E-07 55.4 23.3 184 146-358 47-239 (267)
48 1q7f_A NHL, brain tumor CG1071 98.0 0.0013 4.5E-08 58.4 20.5 189 146-357 40-238 (286)
49 1k8k_C P40, ARP2/3 complex 41 97.9 0.0024 8.3E-08 58.5 22.0 190 146-358 19-234 (372)
50 2qc5_A Streptogramin B lactona 97.9 0.0046 1.6E-07 54.8 22.6 182 146-356 72-259 (300)
51 3jrp_A Fusion protein of prote 97.9 0.0018 6.1E-08 59.5 20.4 194 147-365 69-292 (379)
52 2z2n_A Virginiamycin B lyase; 97.9 0.0022 7.6E-08 56.9 20.2 183 146-358 109-296 (299)
53 1gxr_A ESG1, transducin-like e 97.8 0.002 6.8E-08 58.1 20.0 183 146-358 108-297 (337)
54 4ery_A WD repeat-containing pr 97.8 0.0039 1.4E-07 56.0 21.6 186 146-358 76-269 (312)
55 3bws_A Protein LP49; two-domai 97.8 0.00054 1.8E-08 64.8 16.1 178 165-358 102-293 (433)
56 2qc5_A Streptogramin B lactona 97.8 0.0023 8E-08 56.8 19.5 181 146-356 30-217 (300)
57 3jro_A Fusion protein of prote 97.8 0.001 3.5E-08 68.3 18.8 191 146-358 20-239 (753)
58 1ijq_A LDL receptor, low-densi 97.8 0.016 5.6E-07 52.6 24.9 188 140-358 33-239 (316)
59 3v65_B Low-density lipoprotein 97.8 0.0098 3.4E-07 55.8 23.9 183 146-358 127-319 (386)
60 3ow8_A WD repeat-containing pr 97.8 0.0061 2.1E-07 55.4 22.0 186 147-358 92-280 (321)
61 3ow8_A WD repeat-containing pr 97.8 0.0064 2.2E-07 55.3 21.9 185 147-358 48-238 (321)
62 4aez_A CDC20, WD repeat-contai 97.7 0.0056 1.9E-07 57.3 22.0 174 165-358 114-294 (401)
63 1k8k_C P40, ARP2/3 complex 41 97.7 0.0024 8.2E-08 58.6 19.0 189 146-357 63-274 (372)
64 1gxr_A ESG1, transducin-like e 97.7 0.002 6.9E-08 58.0 18.1 183 146-356 152-336 (337)
65 3v64_C Agrin; beta propeller, 97.7 0.028 9.4E-07 51.9 26.9 183 146-358 84-276 (349)
66 4gqb_B Methylosome protein 50; 97.7 0.0065 2.2E-07 55.9 21.5 187 145-358 91-290 (344)
67 3vl1_A 26S proteasome regulato 97.7 0.01 3.6E-07 55.4 23.3 189 145-358 107-323 (420)
68 1ri6_A Putative isomerase YBHE 97.7 0.0031 1.1E-07 57.0 19.1 147 196-356 141-307 (343)
69 3hfq_A Uncharacterized protein 97.7 0.0023 7.9E-08 58.5 18.2 229 97-356 15-270 (347)
70 3vgz_A Uncharacterized protein 97.7 0.0036 1.2E-07 57.0 19.4 181 164-358 69-263 (353)
71 3fvz_A Peptidyl-glycine alpha- 97.7 0.016 5.6E-07 52.6 23.7 193 146-358 101-323 (329)
72 4ery_A WD repeat-containing pr 97.7 0.0037 1.3E-07 56.2 19.1 188 146-358 34-224 (312)
73 3no2_A Uncharacterized protein 97.7 0.005 1.7E-07 54.9 19.4 190 147-366 5-202 (276)
74 3zwl_B Eukaryotic translation 97.7 0.0035 1.2E-07 57.2 18.8 187 146-358 43-250 (369)
75 1vyh_C Platelet-activating fac 97.7 0.015 5.2E-07 54.7 23.5 183 146-358 161-370 (410)
76 2pm7_B Protein transport prote 97.6 0.0083 2.8E-07 53.7 20.5 187 146-357 20-238 (297)
77 1vyh_C Platelet-activating fac 97.6 0.0079 2.7E-07 56.7 20.6 185 146-358 119-328 (410)
78 3p5b_L Low density lipoprotein 97.6 0.036 1.2E-06 52.2 24.9 184 146-358 123-321 (400)
79 4g56_B MGC81050 protein; prote 97.6 0.0013 4.6E-08 60.8 14.8 184 146-358 150-344 (357)
80 3mkq_A Coatomer beta'-subunit; 97.6 0.011 3.6E-07 60.7 23.0 188 146-358 66-260 (814)
81 2aq5_A Coronin-1A; WD40 repeat 97.6 0.013 4.5E-07 54.7 21.6 191 146-358 93-300 (402)
82 4aez_A CDC20, WD repeat-contai 97.6 0.014 4.9E-07 54.5 21.8 184 146-358 145-337 (401)
83 2ynn_A Coatomer subunit beta'; 97.5 0.028 9.4E-07 50.4 22.8 185 146-358 66-260 (304)
84 2hqs_A Protein TOLB; TOLB, PAL 97.5 0.015 5.1E-07 55.0 21.7 206 146-382 189-408 (415)
85 4g56_B MGC81050 protein; prote 97.5 0.0073 2.5E-07 55.8 19.2 175 165-358 116-302 (357)
86 3u4y_A Uncharacterized protein 97.5 0.0043 1.5E-07 56.1 17.2 185 146-358 9-208 (331)
87 3vl1_A 26S proteasome regulato 97.5 0.015 5.2E-07 54.3 21.4 105 252-358 258-366 (420)
88 3fm0_A Protein CIAO1; WDR39,SG 97.5 0.0069 2.3E-07 55.6 18.4 189 146-356 27-224 (345)
89 1got_B GT-beta; complex (GTP-b 97.5 0.0098 3.3E-07 54.3 19.3 169 165-354 165-340 (340)
90 1got_B GT-beta; complex (GTP-b 97.5 0.011 3.8E-07 53.9 19.7 190 146-358 66-258 (340)
91 4gqb_B Methylosome protein 50; 97.5 0.002 6.7E-08 59.5 14.4 182 146-358 138-332 (344)
92 2ynn_A Coatomer subunit beta'; 97.5 0.017 5.8E-07 51.8 20.4 184 146-358 24-218 (304)
93 3mkq_A Coatomer beta'-subunit; 97.5 0.0083 2.8E-07 61.5 20.4 188 147-358 25-218 (814)
94 3v7d_B Cell division control p 97.5 0.032 1.1E-06 53.0 23.2 150 144-320 277-426 (464)
95 3ei3_B DNA damage-binding prot 97.5 0.0064 2.2E-07 56.3 17.7 185 148-358 87-283 (383)
96 3dwl_C Actin-related protein 2 97.4 0.0024 8.3E-08 58.9 14.5 190 146-358 22-237 (377)
97 3u4y_A Uncharacterized protein 97.4 0.013 4.3E-07 52.9 19.0 220 100-358 20-253 (331)
98 3scy_A Hypothetical bacterial 97.4 0.01 3.5E-07 54.5 18.2 230 97-356 26-290 (361)
99 2dg1_A DRP35, lactonase; beta 97.4 0.0059 2E-07 55.4 16.2 189 146-357 55-263 (333)
100 3no2_A Uncharacterized protein 97.4 0.03 1E-06 49.8 20.3 200 143-372 44-265 (276)
101 1pjx_A Dfpase, DIISOPROPYLFLUO 97.4 0.0082 2.8E-07 53.7 16.8 226 101-358 47-300 (314)
102 1r5m_A SIR4-interacting protei 97.4 0.01 3.6E-07 55.1 17.9 143 196-358 217-362 (425)
103 3odt_A Protein DOA1; ubiquitin 97.4 0.04 1.4E-06 48.8 21.1 187 145-358 27-215 (313)
104 3odt_A Protein DOA1; ubiquitin 97.3 0.021 7.1E-07 50.7 19.1 143 195-358 154-297 (313)
105 3m0c_C LDL receptor, low-densi 97.3 0.084 2.9E-06 54.2 25.7 183 146-358 435-633 (791)
106 3i2n_A WD repeat-containing pr 97.3 0.017 5.8E-07 52.3 18.4 176 164-358 44-244 (357)
107 3iz6_a 40S ribosomal protein R 97.3 0.038 1.3E-06 51.3 20.9 146 196-358 170-330 (380)
108 2pbi_B Guanine nucleotide-bind 97.3 0.019 6.6E-07 52.8 18.7 169 165-354 177-354 (354)
109 1r5m_A SIR4-interacting protei 97.3 0.038 1.3E-06 51.2 21.0 186 146-358 119-320 (425)
110 3hfq_A Uncharacterized protein 97.3 0.0055 1.9E-07 56.0 14.8 181 166-357 20-218 (347)
111 3bg1_A Protein SEC13 homolog; 97.3 0.0078 2.7E-07 54.4 15.6 190 146-357 24-247 (316)
112 2p4o_A Hypothetical protein; p 97.3 0.022 7.4E-07 51.3 18.4 190 146-357 42-242 (306)
113 2hes_X YDR267CP; beta-propelle 97.3 0.013 4.3E-07 53.4 16.9 189 146-357 118-328 (330)
114 4e54_B DNA damage-binding prot 97.2 0.0075 2.6E-07 57.2 15.8 189 147-358 132-328 (435)
115 2pbi_B Guanine nucleotide-bind 97.2 0.013 4.3E-07 54.1 16.8 189 147-358 76-272 (354)
116 3e5z_A Putative gluconolactona 97.2 0.052 1.8E-06 48.2 20.0 184 148-358 41-247 (296)
117 2pm9_A Protein WEB1, protein t 97.2 0.016 5.6E-07 53.8 17.2 189 147-358 126-338 (416)
118 1n7d_A LDL receptor, low-densi 97.2 0.014 4.8E-07 59.3 17.7 183 146-358 417-615 (699)
119 3k26_A Polycomb protein EED; W 97.2 0.015 5.2E-07 52.8 16.6 187 147-358 85-319 (366)
120 1jmx_B Amine dehydrogenase; ox 97.2 0.036 1.2E-06 50.0 19.1 152 146-319 10-179 (349)
121 4a11_B DNA excision repair pro 97.2 0.012 3.9E-07 54.5 15.9 146 195-358 111-277 (408)
122 3e5z_A Putative gluconolactona 97.2 0.053 1.8E-06 48.1 19.6 190 146-358 79-287 (296)
123 2ad6_A Methanol dehydrogenase 97.2 0.18 6.2E-06 49.7 25.1 205 141-366 57-342 (571)
124 1yfq_A Cell cycle arrest prote 97.1 0.039 1.3E-06 49.6 18.9 186 146-358 67-283 (342)
125 3fvz_A Peptidyl-glycine alpha- 97.1 0.09 3.1E-06 47.6 21.3 182 165-358 70-278 (329)
126 1sq9_A Antiviral protein SKI8; 97.1 0.095 3.3E-06 48.2 21.9 202 141-358 20-268 (397)
127 3hrp_A Uncharacterized protein 97.1 0.079 2.7E-06 49.9 21.4 195 145-358 140-355 (409)
128 1kb0_A Quinohemoprotein alcoho 97.1 0.12 4.3E-06 52.1 24.1 204 141-366 72-353 (677)
129 1npe_A Nidogen, entactin; glyc 97.1 0.12 4.1E-06 45.1 23.6 154 140-319 82-242 (267)
130 3f3f_A Nucleoporin SEH1; struc 97.1 0.13 4.6E-06 45.7 25.5 196 147-358 71-338 (351)
131 1yiq_A Quinohemoprotein alcoho 97.1 0.14 4.6E-06 51.9 24.1 198 141-358 65-339 (689)
132 1w6s_A Methanol dehydrogenase 97.1 0.11 3.8E-06 51.6 22.9 205 141-366 57-349 (599)
133 3i2n_A WD repeat-containing pr 97.1 0.022 7.4E-07 51.6 16.7 187 146-357 128-353 (357)
134 2vdu_B TRNA (guanine-N(7)-)-me 97.1 0.086 2.9E-06 50.0 21.5 153 146-320 113-276 (450)
135 1erj_A Transcriptional repress 97.1 0.091 3.1E-06 48.9 21.3 187 146-358 134-342 (393)
136 2vdu_B TRNA (guanine-N(7)-)-me 97.1 0.16 5.3E-06 48.1 23.2 177 146-346 160-373 (450)
137 3g4e_A Regucalcin; six bladed 97.1 0.095 3.2E-06 46.7 20.4 186 146-358 24-230 (297)
138 3fm0_A Protein CIAO1; WDR39,SG 97.1 0.032 1.1E-06 51.0 17.5 150 195-358 27-182 (345)
139 4aow_A Guanine nucleotide-bind 97.1 0.046 1.6E-06 49.1 18.4 142 197-358 186-338 (340)
140 1sq9_A Antiviral protein SKI8; 97.1 0.03 1E-06 51.7 17.5 193 148-358 82-323 (397)
141 4gga_A P55CDC, cell division c 97.0 0.095 3.2E-06 49.2 21.1 176 165-358 126-311 (420)
142 3v64_C Agrin; beta propeller, 97.0 0.11 3.9E-06 47.7 21.1 170 165-357 54-234 (349)
143 3jro_A Fusion protein of prote 97.0 0.015 5E-07 59.6 16.4 149 195-358 20-190 (753)
144 3sfz_A APAF-1, apoptotic pepti 97.0 0.011 3.8E-07 63.8 16.1 185 146-358 972-1159(1249)
145 3sov_A LRP-6, low-density lipo 97.0 0.19 6.4E-06 45.6 23.5 180 146-358 46-239 (318)
146 3v65_B Low-density lipoprotein 97.0 0.077 2.6E-06 49.6 19.7 170 165-357 97-277 (386)
147 1ri6_A Putative isomerase YBHE 97.0 0.016 5.5E-07 52.2 14.6 178 165-357 16-209 (343)
148 3mmy_A MRNA export factor; mRN 97.0 0.11 3.6E-06 47.0 20.3 184 146-358 97-305 (368)
149 1pjx_A Dfpase, DIISOPROPYLFLUO 97.0 0.037 1.3E-06 49.3 16.6 176 164-357 46-256 (314)
150 4e54_B DNA damage-binding prot 96.9 0.013 4.4E-07 55.6 14.1 145 196-358 132-283 (435)
151 2ece_A 462AA long hypothetical 96.9 0.13 4.5E-06 48.8 20.5 194 146-356 95-351 (462)
152 3ei3_B DNA damage-binding prot 96.9 0.075 2.6E-06 48.9 19.1 143 197-357 87-236 (383)
153 3zwl_B Eukaryotic translation 96.9 0.1 3.5E-06 47.2 19.7 198 146-358 85-305 (369)
154 1kv9_A Type II quinohemoprotei 96.9 0.16 5.3E-06 51.2 22.5 198 141-358 61-334 (668)
155 4a11_B DNA excision repair pro 96.9 0.05 1.7E-06 50.2 17.7 105 252-358 256-366 (408)
156 2hes_X YDR267CP; beta-propelle 96.9 0.14 4.9E-06 46.2 20.5 191 149-357 26-230 (330)
157 3iz6_a 40S ribosomal protein R 96.9 0.15 5E-06 47.2 20.9 180 165-358 181-376 (380)
158 1yfq_A Cell cycle arrest prote 96.9 0.059 2E-06 48.5 17.8 182 146-357 22-225 (342)
159 2dg1_A DRP35, lactonase; beta 96.9 0.012 4E-07 53.4 12.9 143 195-356 55-212 (333)
160 2pm9_A Protein WEB1, protein t 96.9 0.022 7.4E-07 53.0 15.1 192 146-358 78-295 (416)
161 2fp8_A Strictosidine synthase; 96.9 0.054 1.8E-06 48.9 17.3 197 140-358 83-314 (322)
162 2pm7_B Protein transport prote 96.9 0.12 4E-06 46.0 19.3 148 195-358 20-190 (297)
163 2ast_B S-phase kinase-associat 96.9 0.00043 1.5E-08 63.5 2.9 42 39-80 5-49 (336)
164 3dwl_C Actin-related protein 2 96.8 0.0058 2E-07 56.3 10.5 147 195-356 22-176 (377)
165 2xyi_A Probable histone-bindin 96.8 0.11 3.8E-06 49.0 19.6 105 252-357 243-353 (430)
166 3k26_A Polycomb protein EED; W 96.8 0.1 3.4E-06 47.2 18.8 145 196-358 85-261 (366)
167 2ghs_A AGR_C_1268P; regucalcin 96.8 0.24 8E-06 44.8 21.1 183 147-357 61-260 (326)
168 2aq5_A Coronin-1A; WD40 repeat 96.8 0.29 1E-05 45.3 22.0 152 195-358 93-255 (402)
169 3frx_A Guanine nucleotide-bind 96.8 0.16 5.6E-06 45.5 19.6 142 195-358 76-228 (319)
170 2p4o_A Hypothetical protein; p 96.8 0.1 3.5E-06 46.8 18.1 144 195-357 42-198 (306)
171 1erj_A Transcriptional repress 96.8 0.056 1.9E-06 50.3 16.9 143 195-357 134-287 (393)
172 1ijq_A LDL receptor, low-densi 96.8 0.17 5.7E-06 45.8 19.6 170 165-357 11-195 (316)
173 3bg1_A Protein SEC13 homolog; 96.8 0.035 1.2E-06 50.0 15.0 191 147-365 71-298 (316)
174 4aow_A Guanine nucleotide-bind 96.8 0.04 1.4E-06 49.5 15.4 186 146-358 97-287 (340)
175 3f3f_A Nucleoporin SEH1; struc 96.7 0.27 9.2E-06 43.6 20.7 194 146-357 22-249 (351)
176 3lrv_A PRE-mRNA-splicing facto 96.7 0.14 4.6E-06 46.5 18.8 104 252-358 138-245 (343)
177 4a0p_A LRP6, LRP-6, low-densit 96.7 0.56 1.9E-05 46.8 27.9 181 146-358 48-238 (628)
178 1pgu_A Actin interacting prote 96.7 0.14 4.8E-06 50.1 20.2 143 196-357 456-614 (615)
179 3scy_A Hypothetical bacterial 96.7 0.1 3.5E-06 47.7 18.0 181 166-358 31-243 (361)
180 1flg_A Protein (quinoprotein e 96.7 0.48 1.6E-05 46.8 23.4 117 141-277 63-200 (582)
181 3mmy_A MRNA export factor; mRN 96.6 0.27 9.1E-06 44.3 20.1 183 147-358 54-248 (368)
182 2xzm_R RACK1; ribosome, transl 96.6 0.37 1.3E-05 43.6 20.8 141 195-356 87-243 (343)
183 3l2o_B F-box only protein 4; s 96.6 0.00073 2.5E-08 60.0 2.0 37 43-79 5-44 (312)
184 3lrv_A PRE-mRNA-splicing facto 96.6 0.33 1.1E-05 43.9 20.1 180 146-350 138-336 (343)
185 3v9f_A Two-component system se 96.5 0.21 7.3E-06 51.1 20.7 212 101-357 428-656 (781)
186 2ad6_A Methanol dehydrogenase 96.5 0.2 7E-06 49.4 19.7 122 189-321 56-193 (571)
187 1pgu_A Actin interacting prote 96.5 0.2 6.9E-06 49.0 19.8 146 198-357 175-328 (615)
188 4a2l_A BT_4663, two-component 96.5 0.48 1.7E-05 48.5 23.1 170 165-358 428-615 (795)
189 3sfz_A APAF-1, apoptotic pepti 96.5 0.37 1.3E-05 51.9 23.0 144 146-317 626-776 (1249)
190 2ojh_A Uncharacterized protein 96.5 0.3 1E-05 42.3 18.7 219 98-358 20-259 (297)
191 4gga_A P55CDC, cell division c 96.5 0.58 2E-05 43.6 24.1 185 146-358 158-354 (420)
192 3dm0_A Maltose-binding peripla 96.4 0.098 3.3E-06 52.7 17.2 186 146-358 441-633 (694)
193 3hrp_A Uncharacterized protein 96.4 0.61 2.1E-05 43.7 22.9 177 165-355 195-408 (409)
194 3frx_A Guanine nucleotide-bind 96.4 0.34 1.2E-05 43.4 18.9 180 146-357 76-267 (319)
195 3dm0_A Maltose-binding peripla 96.4 0.29 1E-05 49.2 20.3 143 195-358 441-593 (694)
196 1pby_B Quinohemoprotein amine 96.4 0.1 3.6E-06 46.5 15.4 138 164-319 11-167 (337)
197 4a2l_A BT_4663, two-component 96.4 0.62 2.1E-05 47.7 23.0 171 165-357 472-659 (795)
198 3v9f_A Two-component system se 96.3 0.25 8.4E-06 50.6 19.6 174 165-358 428-612 (781)
199 2hz6_A Endoplasmic reticulum t 96.3 0.0022 7.5E-08 59.9 3.6 172 165-367 20-200 (369)
200 1nir_A Nitrite reductase; hemo 96.2 0.45 1.5E-05 46.5 20.2 187 146-358 148-356 (543)
201 1w6s_A Methanol dehydrogenase 96.2 0.25 8.7E-06 49.0 18.1 122 189-321 56-199 (599)
202 1nr0_A Actin interacting prote 96.2 0.33 1.1E-05 48.1 19.0 177 165-358 171-356 (611)
203 2hqs_A Protein TOLB; TOLB, PAL 96.2 0.55 1.9E-05 44.0 19.7 177 164-358 159-345 (415)
204 4ggc_A P55CDC, cell division c 96.2 0.59 2E-05 41.1 19.1 136 165-317 46-183 (318)
205 2ymu_A WD-40 repeat protein; u 96.2 0.98 3.4E-05 43.7 22.2 180 146-357 314-498 (577)
206 3m0c_C LDL receptor, low-densi 96.1 0.4 1.4E-05 49.2 19.7 175 165-358 405-590 (791)
207 3s94_A LRP-6, low-density lipo 96.1 1.3 4.5E-05 44.0 25.2 183 146-358 360-552 (619)
208 2p1m_B Transport inhibitor res 96.0 0.0021 7.1E-08 63.8 2.1 34 40-73 3-40 (594)
209 3dr2_A Exported gluconolactona 96.0 0.42 1.4E-05 42.5 17.4 184 147-358 57-268 (305)
210 3p5b_L Low density lipoprotein 96.0 0.3 1E-05 45.8 16.9 173 165-357 93-277 (400)
211 2ymu_A WD-40 repeat protein; u 96.0 0.78 2.7E-05 44.5 20.4 170 165-358 285-458 (577)
212 2ojh_A Uncharacterized protein 95.9 0.72 2.5E-05 39.7 18.6 175 162-357 20-206 (297)
213 3tc9_A Hypothetical hydrolase; 95.9 0.65 2.2E-05 43.9 18.9 186 146-356 149-370 (430)
214 1kb0_A Quinohemoprotein alcoho 95.9 1.7 5.9E-05 43.7 25.7 61 306-371 457-519 (677)
215 2z3z_A Dipeptidyl aminopeptida 95.9 0.91 3.1E-05 45.5 20.9 183 164-358 235-436 (706)
216 1yiq_A Quinohemoprotein alcoho 95.8 0.61 2.1E-05 47.1 19.1 119 190-320 65-199 (689)
217 2xbg_A YCF48-like protein; pho 95.8 1.1 3.7E-05 40.5 22.9 182 145-355 131-320 (327)
218 1kv9_A Type II quinohemoprotei 95.8 0.47 1.6E-05 47.7 18.1 119 190-320 61-194 (668)
219 1nir_A Nitrite reductase; hemo 95.7 0.73 2.5E-05 45.0 18.8 267 44-357 95-402 (543)
220 1pby_B Quinohemoprotein amine 95.6 0.3 1E-05 43.4 14.8 135 215-358 12-164 (337)
221 2xyi_A Probable histone-bindin 95.6 0.25 8.5E-06 46.5 14.7 147 195-358 243-411 (430)
222 1qks_A Cytochrome CD1 nitrite 95.6 1.9 6.6E-05 42.3 21.9 94 263-357 320-421 (567)
223 1nr0_A Actin interacting prote 95.6 1.2 4E-05 44.0 20.2 187 146-357 201-397 (611)
224 3gre_A Serine/threonine-protei 95.6 1.2 4.1E-05 41.5 19.4 129 252-384 122-270 (437)
225 4hw6_A Hypothetical protein, I 95.6 1.5 5E-05 41.5 19.9 186 147-356 153-373 (433)
226 3gre_A Serine/threonine-protei 95.5 0.79 2.7E-05 42.7 17.9 148 195-358 181-360 (437)
227 3g4e_A Regucalcin; six bladed 95.5 0.18 6.3E-06 44.8 12.8 140 195-356 24-179 (297)
228 3ott_A Two-component system se 95.5 0.78 2.7E-05 46.7 18.9 141 195-357 482-626 (758)
229 2qe8_A Uncharacterized protein 95.5 0.69 2.3E-05 42.0 16.8 200 140-350 70-314 (343)
230 4h5i_A Guanine nucleotide-exch 95.5 1.5 5.1E-05 40.1 20.3 191 146-358 144-344 (365)
231 3hxj_A Pyrrolo-quinoline quino 95.4 1.4 4.7E-05 39.1 20.4 182 145-368 106-292 (330)
232 1qks_A Cytochrome CD1 nitrite 95.3 1 3.6E-05 44.2 18.5 188 146-358 166-374 (567)
233 4a0p_A LRP6, LRP-6, low-densit 95.2 2.4 8.3E-05 42.2 21.0 173 165-358 16-198 (628)
234 3s94_A LRP-6, low-density lipo 95.2 1.9 6.5E-05 42.8 20.2 183 146-358 51-244 (619)
235 2oaj_A Protein SNI1; WD40 repe 95.2 0.55 1.9E-05 49.0 17.0 185 146-358 28-243 (902)
236 3azo_A Aminopeptidase; POP fam 95.2 1.1 3.9E-05 44.4 18.8 185 164-358 161-370 (662)
237 2xzm_R RACK1; ribosome, transl 95.2 1.7 5.8E-05 39.1 18.9 183 146-358 87-286 (343)
238 3sov_A LRP-6, low-density lipo 95.0 1.7 5.9E-05 39.1 17.8 145 195-357 46-197 (318)
239 2p9w_A MAL S 1 allergenic prot 94.9 2.2 7.4E-05 38.7 20.6 186 164-356 35-263 (334)
240 1jmx_B Amine dehydrogenase; ox 94.8 0.2 7E-06 44.9 10.9 105 252-357 10-134 (349)
241 3dw8_B Serine/threonine-protei 94.8 0.84 2.9E-05 42.5 15.6 104 252-357 188-315 (447)
242 1n7d_A LDL receptor, low-densi 94.8 0.19 6.5E-06 50.9 11.6 170 165-357 387-571 (699)
243 2ghs_A AGR_C_1268P; regucalcin 94.7 0.83 2.8E-05 41.1 14.8 138 195-356 60-209 (326)
244 3sjl_D Methylamine dehydrogena 94.7 2.6 9E-05 39.1 18.2 105 252-358 237-364 (386)
245 3tc9_A Hypothetical hydrolase; 94.6 0.59 2E-05 44.2 13.9 144 195-357 149-301 (430)
246 3dr2_A Exported gluconolactona 94.5 0.79 2.7E-05 40.7 13.9 102 252-357 96-224 (305)
247 3hxj_A Pyrrolo-quinoline quino 94.4 1.8 6.2E-05 38.3 16.2 166 166-366 80-250 (330)
248 2fp8_A Strictosidine synthase; 94.2 0.63 2.1E-05 41.7 12.7 137 164-316 165-314 (322)
249 3c5m_A Oligogalacturonate lyas 94.1 1.7 6E-05 39.4 15.9 180 164-358 168-385 (396)
250 3o4h_A Acylamino-acid-releasin 94.1 0.73 2.5E-05 45.1 13.9 168 165-355 91-274 (582)
251 3ott_A Two-component system se 94.1 4.8 0.00017 40.7 20.4 166 165-357 83-260 (758)
252 3vu4_A KMHSV2; beta-propeller 94.0 3.4 0.00012 37.4 21.7 115 252-367 206-346 (355)
253 4ggc_A P55CDC, cell division c 94.0 2.9 9.8E-05 36.5 23.6 189 146-358 78-274 (318)
254 3pe7_A Oligogalacturonate lyas 93.9 2 6.7E-05 39.1 15.7 186 164-358 168-385 (388)
255 3ogk_B Coronatine-insensitive 93.8 0.018 6.2E-07 56.9 1.7 32 43-74 13-48 (592)
256 3pe7_A Oligogalacturonate lyas 93.8 2.8 9.6E-05 38.0 16.6 180 164-358 60-274 (388)
257 3c5m_A Oligogalacturonate lyas 93.8 2.6 8.8E-05 38.3 16.4 144 164-322 216-391 (396)
258 3azo_A Aminopeptidase; POP fam 93.7 5.1 0.00017 39.5 19.4 145 164-322 217-376 (662)
259 3vu4_A KMHSV2; beta-propeller 93.5 4.2 0.00014 36.8 20.9 129 215-358 82-228 (355)
260 2hz6_A Endoplasmic reticulum t 93.4 0.019 6.6E-07 53.3 1.0 147 191-366 5-156 (369)
261 2xbg_A YCF48-like protein; pho 93.3 4.3 0.00015 36.4 20.9 184 172-378 23-211 (327)
262 1k32_A Tricorn protease; prote 92.9 11 0.00036 39.8 23.2 133 215-358 318-462 (1045)
263 1flg_A Protein (quinoprotein e 92.9 2 6.8E-05 42.3 14.6 119 190-320 63-200 (582)
264 3o4h_A Acylamino-acid-releasin 92.8 6.6 0.00023 38.1 18.4 107 248-358 116-228 (582)
265 2z3z_A Dipeptidyl aminopeptida 92.7 8.8 0.0003 38.2 25.3 139 213-358 234-392 (706)
266 3dw8_B Serine/threonine-protei 92.5 4.5 0.00015 37.4 16.1 111 197-321 240-379 (447)
267 2oiz_A Aromatic amine dehydrog 91.8 7.3 0.00025 35.4 16.8 106 164-275 31-143 (361)
268 3kya_A Putative phosphatase; s 91.8 2.6 8.8E-05 40.6 13.4 149 195-357 151-341 (496)
269 2bkl_A Prolyl endopeptidase; m 91.8 11 0.00039 37.5 20.7 144 164-321 202-357 (695)
270 2ecf_A Dipeptidyl peptidase IV 91.8 11 0.00039 37.5 19.8 92 264-356 264-368 (741)
271 2qe8_A Uncharacterized protein 91.4 7.7 0.00026 34.8 20.5 204 141-356 21-277 (343)
272 4hw6_A Hypothetical protein, I 91.3 3.8 0.00013 38.6 14.1 142 196-356 153-303 (433)
273 2mad_H Methylamine dehydrogena 91.1 9.1 0.00031 35.1 23.5 63 294-358 277-351 (373)
274 2ecf_A Dipeptidyl peptidase IV 90.8 14 0.00049 36.8 22.2 100 215-322 264-375 (741)
275 3oyo_A Hemopexin fold protein 90.8 2.7 9.2E-05 35.8 11.2 146 145-314 12-197 (225)
276 3iuj_A Prolyl endopeptidase; h 90.7 15 0.0005 36.8 21.7 132 214-358 259-406 (693)
277 2p9w_A MAL S 1 allergenic prot 90.1 10 0.00036 34.2 15.8 146 214-367 35-222 (334)
278 2gop_A Trilobed protease; beta 90.0 9.7 0.00033 33.7 18.1 167 164-354 85-290 (347)
279 2be1_A Serine/threonine-protei 89.9 0.74 2.5E-05 42.0 7.3 111 252-366 10-137 (339)
280 2xdw_A Prolyl endopeptidase; a 88.9 20 0.00069 35.8 22.1 180 163-358 207-415 (710)
281 2j04_B YDR362CP, TAU91; beta p 88.9 6.5 0.00022 38.0 13.7 102 254-358 324-429 (524)
282 2oaj_A Protein SNI1; WD40 repe 88.6 12 0.00042 38.7 16.4 143 195-358 28-183 (902)
283 2bkl_A Prolyl endopeptidase; m 88.5 21 0.00072 35.5 21.3 204 145-356 130-350 (695)
284 1yr2_A Prolyl oligopeptidase; 88.4 13 0.00046 37.3 16.3 145 163-323 293-449 (741)
285 4h5i_A Guanine nucleotide-exch 87.5 16 0.00055 33.0 17.0 135 215-358 158-301 (365)
286 1qhu_A Protein (hemopexin); be 87.3 10 0.00036 35.9 13.5 198 146-375 158-404 (460)
287 4gq1_A NUP37; propeller, trans 86.5 5.3 0.00018 36.7 11.1 105 252-358 155-287 (393)
288 1jof_A Carboxy-CIS,CIS-muconat 86.3 18 0.00063 32.4 16.2 138 214-358 167-342 (365)
289 2xdw_A Prolyl endopeptidase; a 85.9 30 0.001 34.5 22.1 199 145-356 134-367 (710)
290 1k32_A Tricorn protease; prote 85.8 19 0.00066 37.8 16.3 98 215-322 359-468 (1045)
291 1fwx_A Nitrous oxide reductase 85.4 28 0.00097 34.1 15.8 185 163-357 111-361 (595)
292 3iuj_A Prolyl endopeptidase; h 85.4 26 0.00089 34.9 16.4 145 164-324 259-414 (693)
293 3b7f_A Glycosyl hydrolase, BNR 84.4 24 0.00083 32.2 20.4 147 166-323 33-216 (394)
294 1xfd_A DIP, dipeptidyl aminope 83.6 36 0.0012 33.6 19.3 99 215-317 229-347 (723)
295 1pex_A Collagenase-3, MMP-13; 83.6 18 0.00062 30.1 18.8 145 143-317 30-194 (207)
296 3ei3_A DNA damage-binding prot 81.7 54 0.0018 35.1 17.5 136 212-357 862-999 (1158)
297 3lp9_A LS-24; SEED albumin, pl 80.7 12 0.00042 31.7 10.0 61 252-316 129-202 (227)
298 2mad_H Methylamine dehydrogena 80.6 34 0.0012 31.2 25.3 192 146-358 77-308 (373)
299 3c75_H MADH, methylamine dehyd 80.2 38 0.0013 31.6 18.6 63 294-358 329-403 (426)
300 3sjl_D Methylamine dehydrogena 79.4 6.6 0.00023 36.4 8.5 102 252-358 44-170 (386)
301 2oit_A Nucleoporin 214KDA; NH2 79.3 19 0.00066 33.5 12.0 104 253-358 162-279 (434)
302 3c75_H MADH, methylamine dehyd 79.1 5.6 0.00019 37.4 8.0 103 252-358 84-210 (426)
303 2w18_A PALB2, fancn, partner a 79.1 38 0.0013 30.8 22.3 146 195-355 192-355 (356)
304 1su3_A Interstitial collagenas 78.4 46 0.0016 31.4 15.9 63 252-318 367-435 (450)
305 2j04_B YDR362CP, TAU91; beta p 78.3 49 0.0017 31.7 14.9 103 252-358 276-387 (524)
306 3b7f_A Glycosyl hydrolase, BNR 77.4 42 0.0014 30.5 26.4 203 146-378 128-391 (394)
307 3amr_A 3-phytase; beta-propell 76.7 44 0.0015 30.4 19.0 176 164-356 50-262 (355)
308 4gq1_A NUP37; propeller, trans 76.6 44 0.0015 30.3 19.2 64 195-274 155-220 (393)
309 3qqz_A Putative uncharacterize 75.9 38 0.0013 29.2 21.2 146 195-357 38-204 (255)
310 3sre_A PON1, serum paraoxonase 74.9 49 0.0017 30.0 13.7 179 163-356 82-297 (355)
311 3kya_A Putative phosphatase; s 74.6 19 0.00065 34.5 10.4 105 252-356 151-277 (496)
312 2cn3_A Xyloglucanase, beta-1,4 73.9 15 0.0005 37.2 10.0 167 174-356 556-732 (737)
313 1hxn_A Hemopexin, HPX; heme, b 73.1 41 0.0014 28.2 12.5 64 248-315 68-144 (219)
314 2j04_A TAU60, YPL007P, hypothe 73.1 73 0.0025 31.1 17.7 144 195-358 96-255 (588)
315 3lp9_A LS-24; SEED albumin, pl 72.6 8.2 0.00028 32.8 6.6 108 144-273 70-202 (227)
316 1itv_A MMP9; adaptive molecula 72.3 39 0.0013 27.7 16.8 142 142-317 12-176 (195)
317 3ba0_A Macrophage metalloelast 71.6 60 0.0021 29.6 17.1 145 143-320 187-355 (365)
318 3c7x_A Matrix metalloproteinas 71.2 42 0.0014 27.6 16.3 141 142-317 11-177 (196)
319 1qhu_A Protein (hemopexin); be 70.5 73 0.0025 30.1 19.3 136 195-356 158-330 (460)
320 2oit_A Nucleoporin 214KDA; NH2 70.5 7.8 0.00027 36.3 6.6 59 296-356 162-222 (434)
321 2j04_A TAU60, YPL007P, hypothe 68.5 92 0.0031 30.4 18.6 151 146-318 96-257 (588)
322 1xfd_A DIP, dipeptidyl aminope 68.1 86 0.0029 30.8 14.2 107 165-277 38-148 (723)
323 3oyo_A Hemopexin fold protein 67.1 56 0.0019 27.4 11.3 100 251-356 69-197 (225)
324 1gen_A Gelatinase A; hydrolase 66.4 57 0.0019 27.3 16.5 62 252-317 135-204 (218)
325 2oiz_A Aromatic amine dehydrog 65.5 75 0.0025 28.4 12.1 60 294-357 264-334 (361)
326 2be1_A Serine/threonine-protei 65.1 11 0.00036 34.3 6.0 102 215-320 21-137 (339)
327 1itv_A MMP9; adaptive molecula 64.6 57 0.002 26.7 11.1 103 146-274 64-176 (195)
328 2gop_A Trilobed protease; beta 63.7 74 0.0025 27.7 14.4 161 163-354 42-250 (347)
329 1yr2_A Prolyl oligopeptidase; 62.9 1.3E+02 0.0043 30.0 20.4 199 146-356 173-394 (741)
330 2ece_A 462AA long hypothetical 62.5 1.1E+02 0.0036 29.0 18.6 22 195-224 95-116 (462)
331 3qqz_A Putative uncharacterize 62.5 75 0.0025 27.3 24.5 192 146-356 38-252 (255)
332 3q6k_A 43.2 kDa salivary prote 61.1 73 0.0025 29.2 11.0 46 295-341 170-216 (381)
333 1mda_H Methylamine dehydrogena 58.9 19 0.00066 32.9 6.7 61 253-317 32-107 (368)
334 3sre_A PON1, serum paraoxonase 57.2 1.1E+02 0.0038 27.6 15.3 99 254-356 128-251 (355)
335 1hxn_A Hemopexin, HPX; heme, b 56.5 87 0.003 26.1 13.9 144 140-315 20-197 (219)
336 1xip_A Nucleoporin NUP159; bet 53.8 1.3E+02 0.0046 27.5 13.2 97 252-358 96-192 (388)
337 1fwx_A Nitrous oxide reductase 52.9 62 0.0021 31.7 9.4 151 164-325 254-441 (595)
338 1cru_A Protein (soluble quinop 52.0 88 0.003 29.3 10.3 95 251-346 36-163 (454)
339 1jof_A Carboxy-CIS,CIS-muconat 51.5 1.3E+02 0.0044 26.6 20.2 67 251-317 264-343 (365)
340 2w18_A PALB2, fancn, partner a 51.1 1.4E+02 0.0049 27.0 20.2 153 146-313 192-355 (356)
341 1pex_A Collagenase-3, MMP-13; 47.3 1.2E+02 0.0041 25.0 14.6 99 146-274 79-194 (207)
342 1mda_H Methylamine dehydrogena 47.1 1.5E+02 0.0051 26.8 10.7 102 252-357 222-346 (368)
343 1ck7_A Protein (gelatinase A); 45.0 2.4E+02 0.0081 27.8 12.9 61 252-316 548-616 (631)
344 2ism_A Putative oxidoreductase 43.3 1.8E+02 0.0061 25.9 12.9 63 253-315 90-178 (352)
345 1su3_A Interstitial collagenas 42.9 1.6E+02 0.0054 27.6 10.3 64 195-275 367-435 (450)
346 1tl2_A L10, protein (tachylect 42.2 72 0.0024 27.0 6.9 64 252-319 51-123 (236)
347 1z68_A Fibroblast activation p 40.6 2.7E+02 0.0092 27.2 17.4 72 252-323 263-354 (719)
348 2kwv_A RAD30 homolog B, DNA po 36.6 16 0.00056 22.0 1.5 21 38-58 16-36 (48)
349 1z68_A Fibroblast activation p 36.1 2E+02 0.0068 28.2 10.6 97 215-322 37-146 (719)
350 1cru_A Protein (soluble quinop 35.3 2.8E+02 0.0095 25.8 13.1 52 252-303 91-162 (454)
351 3ba0_A Macrophage metalloelast 35.0 2.6E+02 0.0087 25.3 14.5 102 146-277 236-355 (365)
352 2xe4_A Oligopeptidase B; hydro 34.6 3.6E+02 0.012 26.9 17.1 144 163-322 294-465 (751)
353 3s25_A Hypothetical 7-bladed b 33.8 2.4E+02 0.0081 24.6 17.2 141 191-358 21-177 (302)
354 3ei3_A DNA damage-binding prot 32.7 4.8E+02 0.016 27.8 14.2 133 163-314 863-1000(1158)
355 2xe4_A Oligopeptidase B; hydro 32.4 3.9E+02 0.013 26.6 15.7 91 263-355 295-398 (751)
356 1gen_A Gelatinase A; hydrolase 31.3 2.2E+02 0.0077 23.5 14.5 99 252-356 87-201 (218)
357 4hvt_A Ritya.17583.B, post-pro 31.0 4.1E+02 0.014 26.5 18.0 148 164-324 269-438 (711)
358 2g8s_A Glucose/sorbosone dehyd 29.2 3E+02 0.01 24.3 10.7 106 252-358 28-174 (353)
359 4a5s_A Dipeptidyl peptidase 4 29.0 1.8E+02 0.0063 28.8 9.0 103 252-358 27-142 (740)
360 3a9g_A Putative uncharacterize 26.1 3.5E+02 0.012 24.0 14.5 107 248-357 35-178 (354)
361 2ism_A Putative oxidoreductase 22.5 4E+02 0.014 23.5 16.7 29 330-358 270-298 (352)
362 1sqj_A OXG-RCBH, oligoxylogluc 22.0 6.1E+02 0.021 25.4 25.1 224 102-365 39-337 (789)
363 1xip_A Nucleoporin NUP159; bet 20.3 4.9E+02 0.017 23.6 9.5 63 290-357 92-155 (388)
364 3amr_A 3-phytase; beta-propell 20.1 4.8E+02 0.016 23.5 18.4 134 164-314 99-262 (355)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=280.78 Aligned_cols=253 Identities=17% Similarity=0.282 Sum_probs=215.2
Q ss_pred eEEeecCCCCCCCCCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccCCCCCCC
Q 016552 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPAL 163 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~ 163 (387)
.+|++++. .......+++||+.+++|..++.+|.+ |.++++++++++||++||... ....
T Consensus 17 ~i~v~GG~---~~~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~lyv~GG~~~--~~~~ 76 (302)
T 2xn4_A 17 LMVVVGGQ---APKAIRSVECYDFKEERWHQVAELPSR---------------RCRAGMVYMAGLVFAVGGFNG--SLRV 76 (302)
T ss_dssp EEEEECCB---SSSBCCCEEEEETTTTEEEEECCCSSC---------------CBSCEEEEETTEEEEESCBCS--SSBC
T ss_pred EEEEECCC---CCCCCCcEEEEcCcCCcEeEcccCCcc---------------cccceEEEECCEEEEEeCcCC--Cccc
Confidence 46777763 112233589999999999999887763 556888999999999999765 3456
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccc
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~ 243 (387)
+++++||+.+++|+++++||.+|..+++++++++|||+||.+. ...++++++||+.+++ |+.++++|.++..
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~~d~~~~~----W~~~~~~p~~r~~- 148 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDG---STGLSSVEAYNIKSNE----WFHVAPMNTRRSS- 148 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECS---SCEEEEEEEEETTTTE----EEEECCCSSCCBS-
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCC---CccCceEEEEeCCCCe----EeecCCCCCcccC-
Confidence 8899999999999999999999999999999999999999865 2456789999999999 9999999977654
Q ss_pred cceEEEEECCEEEEEeeeC-------CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCC-----CeEEEE
Q 016552 244 EAIDAVGWKGKLCLVNVKG-------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLSRY 311 (387)
Q Consensus 244 ~~~~~~~~~g~lyv~gg~~-------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~-----~~l~~y 311 (387)
+.+++++++||++||.. .++++||+.+++|+.++. ++..+..+++++.+++||++||.+ ..+++|
T Consensus 149 --~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 225 (302)
T 2xn4_A 149 --VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE-MSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVY 225 (302)
T ss_dssp --CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEE
T ss_pred --ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC-CccccccccEEEECCEEEEECCCCCCcccceEEEE
Confidence 77889999999999863 679999999999999976 777888888999999999999853 469999
Q ss_pred eCCCCceeEccccccccCceEEEEeCCeEEEEecCC-----CeEEEEeccCCCCCCceEE---eCCCC
Q 016552 312 DEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG-----GGIVVVDVKAAAAPTIFVV---DTPLG 371 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~-----~~i~~~d~~~~~~~~~W~~---~~p~~ 371 (387)
|+++++|+.+..+|..+..+.++.++++||++||.+ ..+++||+.+. +|.. .+|..
T Consensus 226 d~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~----~W~~~~~~~~~~ 289 (302)
T 2xn4_A 226 DPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD----KWTVVSSCMSTG 289 (302)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT----EEEECSSCCSSC
T ss_pred eCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC----eEEECCcccCcc
Confidence 999999999998888888888999999999999853 56999999988 9996 35544
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.8e-36 Score=280.77 Aligned_cols=255 Identities=16% Similarity=0.231 Sum_probs=215.9
Q ss_pred eEEeecCCCCCCCCCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccC--CCCC
Q 016552 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTH--NFNP 161 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~--~~~~ 161 (387)
.+|++++. .......+++||+.+++|..++.+|.+ |.++++++++++||++||... ....
T Consensus 26 ~i~v~GG~---~~~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~lyv~GG~~~~~~~~~ 87 (308)
T 1zgk_A 26 LIYTAGGY---FRQSLSYLEAYNPSNGTWLRLADLQVP---------------RSGLAGCVVGGLLYAVGGRNNSPDGNT 87 (308)
T ss_dssp CEEEECCB---SSSBCCCEEEEETTTTEEEECCCCSSC---------------CBSCEEEEETTEEEEECCEEEETTEEE
T ss_pred EEEEEeCc---CCCCcceEEEEcCCCCeEeECCCCCcc---------------cccceEEEECCEEEEECCCcCCCCCCe
Confidence 47777763 122334589999999999999887763 556888999999999999731 1134
Q ss_pred CCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCc
Q 016552 162 ALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 162 ~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~ 241 (387)
..+++++||+.+++|+++++||.+|..+++++++++|||+||... ...++++++||+.+++ |+.++++|.++.
T Consensus 88 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~yd~~~~~----W~~~~~~p~~r~ 160 (308)
T 1zgk_A 88 DSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG---CIHHNSVERYEPERDE----WHLVAPMLTRRI 160 (308)
T ss_dssp ECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEET---TEECCCEEEEETTTTE----EEECCCCSSCCB
T ss_pred ecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCC---CcccccEEEECCCCCe----EeECCCCCcccc
Confidence 567899999999999999999999999999999999999999865 2356789999999999 999999997765
Q ss_pred cccceEEEEECCEEEEEeeeC-----CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCC-----CeEEEE
Q 016552 242 SREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLSRY 311 (387)
Q Consensus 242 ~~~~~~~~~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~-----~~l~~y 311 (387)
. +++++++++||++||.. +++++||+.+++|+.++. ++..+..+++++.+++||++||.. ..+++|
T Consensus 161 ~---~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 161 G---VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA-MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp S---CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEE
T ss_pred c---eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC-CCCccccceEEEECCEEEEEeCCCCCCccceEEEE
Confidence 4 78888999999999965 679999999999999986 777888888899999999999853 469999
Q ss_pred eCCCCceeEccccccccCceEEEEeCCeEEEEecC-----CCeEEEEeccCCCCCCceEE--eCCCC
Q 016552 312 DEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCEN-----GGGIVVVDVKAAAAPTIFVV--DTPLG 371 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~-----~~~i~~~d~~~~~~~~~W~~--~~p~~ 371 (387)
|+++++|+++..+|..+..++++.++++|||+||. ..++++||+.+. +|.. .+|..
T Consensus 237 d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~----~W~~~~~~p~~ 299 (308)
T 1zgk_A 237 DVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD----TWSEVTRMTSG 299 (308)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT----EEEEEEECSSC
T ss_pred eCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCC----EEeecCCCCCC
Confidence 99999999999888888888899999999999984 367999999987 9995 56643
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=279.25 Aligned_cols=246 Identities=19% Similarity=0.267 Sum_probs=214.0
Q ss_pred eEEeecCCCCCCCCCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccCCCCCCC
Q 016552 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPAL 163 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~ 163 (387)
.+|.+++. .....+++||+.+++|..++++|.+ |.++++++++++||++||.. ....
T Consensus 13 ~l~~~GG~-----~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~lyv~GG~~---~~~~ 69 (306)
T 3ii7_A 13 YRIALFGG-----SQPQSCRYFNPKDYSWTDIRCPFEK---------------RRDAACVFWDNVVYILGGSQ---LFPI 69 (306)
T ss_dssp EEEEEECC-----SSTTSEEEEETTTTEEEECCCCSCC---------------CBSCEEEEETTEEEEECCBS---SSBC
T ss_pred eEEEEeCC-----CCCceEEEecCCCCCEecCCCCCcc---------------cceeEEEEECCEEEEEeCCC---CCCc
Confidence 36777753 2245689999999999999988763 56689999999999999976 3567
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccc
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~ 243 (387)
+++++||+.+++|++++++|.+|..+++++++++|||+||.+. .....+++++||+.+++ |+.++++|.++..
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~~- 142 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEV--GNSALYLFECYDTRTES----WHTKPSMLTQRCS- 142 (306)
T ss_dssp CEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBT--TBSCCCCEEEEETTTTE----EEEECCCSSCCBS-
T ss_pred ceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCC--CCcEeeeEEEEeCCCCc----eEeCCCCcCCcce-
Confidence 8899999999999999999999999999999999999999864 23467899999999999 9999999987754
Q ss_pred cceEEEEECCEEEEEeeeC---------CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCC-----CeEE
Q 016552 244 EAIDAVGWKGKLCLVNVKG---------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLS 309 (387)
Q Consensus 244 ~~~~~~~~~g~lyv~gg~~---------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~-----~~l~ 309 (387)
+.+++++++||++||.. +++++||+++++|+.++. ++..+..+++++.+++||++||.. ..++
T Consensus 143 --~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 219 (306)
T 3ii7_A 143 --HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP-MIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVE 219 (306)
T ss_dssp --CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCEETTEEBCCEE
T ss_pred --eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC-ccchhhcceEEEECCEEEEEeCCCCCCCCceEE
Confidence 78889999999999853 569999999999999986 777888889999999999999842 4699
Q ss_pred EEeCCCCceeEccccccccCceEEEEeCCeEEEEecC-----CCeEEEEeccCCCCCCceEE
Q 016552 310 RYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCEN-----GGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 310 ~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~-----~~~i~~~d~~~~~~~~~W~~ 366 (387)
+||+++++|+.+..+|..+..+.++.++++|||+||. ...+++||+.+. +|..
T Consensus 220 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~----~W~~ 277 (306)
T 3ii7_A 220 YYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETD----KWVA 277 (306)
T ss_dssp EEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTT----EEEE
T ss_pred EeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCC----eEEe
Confidence 9999999999999988888888899999999999984 268999999987 9995
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=277.31 Aligned_cols=253 Identities=18% Similarity=0.244 Sum_probs=215.0
Q ss_pred eEEeecC-CCCCCCCCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccCCCCCC
Q 016552 84 SLYALFS-PKSNSSSTPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPA 162 (387)
Q Consensus 84 ~l~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~ 162 (387)
.+|++++ .. .......+++||+.+++|..++.+|.+ |.+++++..+++||++||... ...
T Consensus 16 ~i~~~GG~~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~l~v~GG~~~--~~~ 76 (301)
T 2vpj_A 16 VLLVVGGFGS--QQSPIDVVEKYDPKTQEWSFLPSITRK---------------RRYVASVSLHDRIYVIGGYDG--RSR 76 (301)
T ss_dssp EEEEECCEET--TTEECCCEEEEETTTTEEEECCCCSSC---------------CBSCEEEEETTEEEEECCBCS--SCB
T ss_pred EEEEEeCccC--CCcceeEEEEEcCCCCeEEeCCCCChh---------------hccccEEEECCEEEEEcCCCC--Ccc
Confidence 4677765 21 112233589999999999999987762 556889999999999999764 456
Q ss_pred CCccEEEeccCCc---eeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCC
Q 016552 163 LTRPLIFDPICRT---WTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 163 ~~~~~vyd~~t~~---W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~ 239 (387)
.+++++||+.+++ |++++++|.+|..++++..+++||++||... ....+++++||+.+++ |+.++++|.+
T Consensus 77 ~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~---~~~~~~~~~~d~~~~~----W~~~~~~p~~ 149 (301)
T 2vpj_A 77 LSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDG---SRRHTSMERYDPNIDQ----WSMLGDMQTA 149 (301)
T ss_dssp CCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCS---SCBCCEEEEEETTTTE----EEEEEECSSC
T ss_pred CceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCC---CcccceEEEEcCCCCe----EEECCCCCCC
Confidence 7889999999999 9999999999999999999999999999875 2346799999999999 9999999977
Q ss_pred CccccceEEEEECCEEEEEeeeC-----CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCC-----CeEE
Q 016552 240 RFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLS 309 (387)
Q Consensus 240 ~~~~~~~~~~~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~-----~~l~ 309 (387)
+.. +.+++++++||++||.. +++++||+.+++|+.++. ++..+..+++++.+++||++||.+ ..++
T Consensus 150 r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~ 225 (301)
T 2vpj_A 150 REG---AGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTP-MATKRSGAGVALLNDHIYVVGGFDGTAHLSSVE 225 (301)
T ss_dssp CBS---CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEE
T ss_pred ccc---ceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCC-CCcccccceEEEECCEEEEEeCCCCCcccceEE
Confidence 654 77888999999999865 789999999999999976 677788888999999999999853 4699
Q ss_pred EEeCCCCceeEccccccccCceEEEEeCCeEEEEecCC-----CeEEEEeccCCCCCCceEE--eCCC
Q 016552 310 RYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG-----GGIVVVDVKAAAAPTIFVV--DTPL 370 (387)
Q Consensus 310 ~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~-----~~i~~~d~~~~~~~~~W~~--~~p~ 370 (387)
+||+++++|+++..+|..+..+.++.++|+||++||.+ ..+++||+.+. +|.. .+|.
T Consensus 226 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~----~W~~~~~~~~ 289 (301)
T 2vpj_A 226 AYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID----SWEVVTSMGT 289 (301)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT----EEEEEEEEEE
T ss_pred EEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC----eEEEcCCCCc
Confidence 99999999999998888888888899999999999853 57899999987 8995 5554
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5e-36 Score=278.59 Aligned_cols=241 Identities=15% Similarity=0.166 Sum_probs=203.9
Q ss_pred EEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccC----CCCCCCCccEEEeccCCce
Q 016552 101 HLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTH----NFNPALTRPLIFDPICRTW 176 (387)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~----~~~~~~~~~~vyd~~t~~W 176 (387)
.+++|||.+++|.. +++|.+ ..|.++++++.+++||++||... ......+++++||+.+++|
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p-------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQ-------------VPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCC-------------SCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred ceEEECCCCCeEec-CCCCCC-------------CCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 58899999999986 555541 12667888899999999999631 1122234589999999999
Q ss_pred eeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEE
Q 016552 177 TFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLC 256 (387)
Q Consensus 177 ~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~ly 256 (387)
+++++||.+|..+++++++++|||+||.+........+++++||+.+++ |+.++++|.+|.. +++++++++||
T Consensus 80 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~~---~~~~~~~~~iy 152 (315)
T 4asc_A 80 LGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFK----WGESDPLPYVVYG---HTVLSHMDLVY 152 (315)
T ss_dssp EECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTE----EEECCCCSSCCBS---CEEEEETTEEE
T ss_pred EECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCc----EeECCCCCCcccc---eeEEEECCEEE
Confidence 9999999999999999999999999997532123567899999999999 9999999987754 88889999999
Q ss_pred EEeeeC------CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCC-----CeEEEEeCCCCceeEccccc
Q 016552 257 LVNVKG------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLSRYDEVMDDWKEVVKSD 325 (387)
Q Consensus 257 v~gg~~------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~-----~~l~~yd~~~~~W~~v~~~~ 325 (387)
++||.. +++++||+.+++|+.++. ++.++..+++++.+++||++||.. ..+++||+++++|+.+..+|
T Consensus 153 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 231 (315)
T 4asc_A 153 VIGGKGSDRKCLNKMCVYDPKKFEWKELAP-MQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFP 231 (315)
T ss_dssp EECCBCTTSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCS
T ss_pred EEeCCCCCCcccceEEEEeCCCCeEEECCC-CCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCC
Confidence 999972 789999999999999987 777888889999999999999853 25999999999999999988
Q ss_pred cccCceEEEEeCCeEEEEecCC--------------CeEEEEeccCCCCCCceEEe
Q 016552 326 LLKGARHAAAGGGRVCAVCENG--------------GGIVVVDVKAAAAPTIFVVD 367 (387)
Q Consensus 326 ~~~~~~~~~~~~g~i~v~gg~~--------------~~i~~~d~~~~~~~~~W~~~ 367 (387)
..+..++++.++++||++||.. .++++||+.+. +|+..
T Consensus 232 ~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~----~W~~~ 283 (315)
T 4asc_A 232 QERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK----KWEGV 283 (315)
T ss_dssp SCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT----EEEEE
T ss_pred CcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC----hhhhh
Confidence 8888888999999999999852 46899999987 99963
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=8e-35 Score=270.80 Aligned_cols=242 Identities=13% Similarity=0.174 Sum_probs=201.2
Q ss_pred EEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccCCC----CCCCCccEEEeccCCce
Q 016552 101 HLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNF----NPALTRPLIFDPICRTW 176 (387)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~----~~~~~~~~vyd~~t~~W 176 (387)
..++|||.+++|.. ++++.+ ..|.+++++..+++||++||..... ....+++++||+.+++|
T Consensus 25 ~~~~yd~~~~~W~~-~~~~~~-------------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 25 AAVAYDPMENECYL-TALAEQ-------------IPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEEEETTTTEEEE-EEECTT-------------SCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred ceEEECCCCCceec-ccCCcc-------------CCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcE
Confidence 37899999999988 334431 1255688888999999999953211 11223489999999999
Q ss_pred eeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEE
Q 016552 177 TFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLC 256 (387)
Q Consensus 177 ~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~ly 256 (387)
+++++||.+|..+++++++++|||+||.... .....+++++||+.+++ |+.++++|.++.. +++++++++||
T Consensus 91 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~~---~~~~~~~~~iy 162 (318)
T 2woz_A 91 VGLPPLPSARCLFGLGEVDDKIYVVAGKDLQ-TEASLDSVLCYDPVAAK----WSEVKNLPIKVYG---HNVISHNGMIY 162 (318)
T ss_dssp EECSCBSSCBCSCEEEEETTEEEEEEEEBTT-TCCEEEEEEEEETTTTE----EEEECCCSSCEES---CEEEEETTEEE
T ss_pred EECCCCCccccccceEEECCEEEEEcCccCC-CCcccceEEEEeCCCCC----EeECCCCCCcccc---cEEEEECCEEE
Confidence 9999999999999999999999999998631 23456789999999999 9999999977654 77888999999
Q ss_pred EEeeeC------CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCC-----CeEEEEeCCCCceeEccccc
Q 016552 257 LVNVKG------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLSRYDEVMDDWKEVVKSD 325 (387)
Q Consensus 257 v~gg~~------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~-----~~l~~yd~~~~~W~~v~~~~ 325 (387)
++||.. +++++||+.+++|+.++. ++..+..+++++.+++||++||.. ..+++||+++++|+.+..+|
T Consensus 163 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 241 (318)
T 2woz_A 163 CLGGKTDDKKCTNRVFIYNPKKGDWKDLAP-MKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFP 241 (318)
T ss_dssp EECCEESSSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCS
T ss_pred EEcCCCCCCCccceEEEEcCCCCEEEECCC-CCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCC
Confidence 999963 679999999999999986 777788888899999999999742 35899999999999999988
Q ss_pred cccCceEEEEeCCeEEEEecCC--------------CeEEEEeccCCCCCCceEEeCC
Q 016552 326 LLKGARHAAAGGGRVCAVCENG--------------GGIVVVDVKAAAAPTIFVVDTP 369 (387)
Q Consensus 326 ~~~~~~~~~~~~g~i~v~gg~~--------------~~i~~~d~~~~~~~~~W~~~~p 369 (387)
..+..+.++.++++||++||.. .++++||+.+. +|...+|
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~----~W~~~~~ 295 (318)
T 2woz_A 242 QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK----EWAGMLK 295 (318)
T ss_dssp SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT----EEEEEES
T ss_pred CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC----Eehhhcc
Confidence 8888888999999999999842 57999999987 9996444
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=260.39 Aligned_cols=218 Identities=17% Similarity=0.228 Sum_probs=188.1
Q ss_pred EEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccC-CCCCCCCccEEEeccCCceeeC
Q 016552 101 HLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTH-NFNPALTRPLIFDPICRTWTFG 179 (387)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~~~vyd~~t~~W~~l 179 (387)
.+++||+.+++|..++++|.+ |.++++++++++||++||... ......+++++||+.+++|+++
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~ 132 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSP---------------RCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES 132 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSC---------------EESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC
T ss_pred ceEEecCCCCeEEECCCCCcc---------------hhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC
Confidence 388999999999999988763 566899999999999999753 2245678899999999999999
Q ss_pred CCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEe
Q 016552 180 PELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVN 259 (387)
Q Consensus 180 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~g 259 (387)
+++|.+|..+++++.+++|||+||... .....+++++||+.+++ |+.++++|.+|.. +.+++++++||++|
T Consensus 133 ~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~~---~~~~~~~~~iyv~G 203 (315)
T 4asc_A 133 DPLPYVVYGHTVLSHMDLVYVIGGKGS--DRKCLNKMCVYDPKKFE----WKELAPMQTARSL---FGATVHDGRIIVAA 203 (315)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCBCT--TSCBCCCEEEEETTTTE----EEECCCCSSCCBS---CEEEEETTEEEEEE
T ss_pred CCCCCcccceeEEEECCEEEEEeCCCC--CCcccceEEEEeCCCCe----EEECCCCCCchhc---eEEEEECCEEEEEe
Confidence 999999999999999999999999854 34567899999999999 9999999977654 78889999999999
Q ss_pred eeC-----CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCC--------------CeEEEEeCCCCceeE
Q 016552 260 VKG-----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS--------------CTLSRYDEVMDDWKE 320 (387)
Q Consensus 260 g~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~--------------~~l~~yd~~~~~W~~ 320 (387)
|.. +++++||+++++|+.++. ++..+..+++++.+++||++||.+ ..+++||+++++|++
T Consensus 204 G~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 282 (315)
T 4asc_A 204 GVTDTGLTSSAEVYSITDNKWAPFEA-FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEG 282 (315)
T ss_dssp EECSSSEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEE
T ss_pred ccCCCCccceEEEEECCCCeEEECCC-CCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhh
Confidence 975 579999999999999987 778888888999999999999842 248999999999999
Q ss_pred ccccccccCceEEEEeCCeEEEEec
Q 016552 321 VVKSDLLKGARHAAAGGGRVCAVCE 345 (387)
Q Consensus 321 v~~~~~~~~~~~~~~~~g~i~v~gg 345 (387)
+ ++..+..++++.++++||++..
T Consensus 283 ~--~~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 283 V--LREIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp E--ESCSSCCSSCEEEEEEECGGGS
T ss_pred h--ccCCcCccceEEeCCEEEEEEe
Confidence 9 4445556777889999999854
No 8
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=8.3e-33 Score=261.22 Aligned_cols=252 Identities=13% Similarity=0.166 Sum_probs=197.5
Q ss_pred eEEeecCCCCCCCCCCeEEEEEeCC--CCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecc-c--CC
Q 016552 84 SLYALFSPKSNSSSTPIHLFTFDPV--SSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAAT-T--HN 158 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~--~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~-~--~~ 158 (387)
.+|++++. ....+++||+. +++|..++++|..| |.++++++++++||++||. . ..
T Consensus 21 ~iyv~GG~------~~~~~~~~d~~~~~~~W~~~~~~p~~~--------------R~~~~~~~~~~~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 21 TVYIGLGS------AGTAWYKLDTQAKDKKWTALAAFPGGP--------------RDQATSAFIDGNLYVFGGIGKNSEG 80 (357)
T ss_dssp EEEEECGG------GTTCEEEEETTSSSCCEEECCCCTTCC--------------CBSCEEEEETTEEEEECCEEECTTS
T ss_pred EEEEEeCc------CCCeEEEEccccCCCCeeECCCCCCCc--------------CccceEEEECCEEEEEcCCCCCCCc
Confidence 47777763 12368899998 48999999988311 5668999999999999997 3 11
Q ss_pred CCCCCCccEEEeccCCceeeCCCCC-CCCcceeEEEeCCEEEEEecCCCCC-C---------------------------
Q 016552 159 FNPALTRPLIFDPICRTWTFGPELV-TPRRWCAAGCSRGAVYVASGIGSQF-S--------------------------- 209 (387)
Q Consensus 159 ~~~~~~~~~vyd~~t~~W~~l~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~-~--------------------------- 209 (387)
.....+++++||+.+++|+++++|+ .+|..+++++.+++|||+||.+... +
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred cceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 2345788999999999999999998 8999998889999999999985410 0
Q ss_pred ---CCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeC------CeEEEEEC--CCCceeec
Q 016552 210 ---SDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG------AEGAVYDV--VANTWDDM 278 (387)
Q Consensus 210 ---~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~------~~i~~yD~--~~~~W~~~ 278 (387)
...++.+++||+.+++ |+.++++|.++. ..+++++++++||++||.. .++++||+ ++++|+.+
T Consensus 161 ~~~~~~~~~v~~yd~~~~~----W~~~~~~p~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQ----WSYAGESPWYGT--AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp GGGGCCCCEEEEEETTTTE----EEEEEECSSCCC--BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEEC
T ss_pred ccccCCcccEEEEeCCCCc----EEECCCCCCCCc--ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec
Confidence 0135799999999999 999999886542 2367888999999999863 67888986 99999999
Q ss_pred cccccc--CCCCcEEEEeCCeEEEEeCCC----------------------CeEEEEeCCCCceeEccccccccCceEEE
Q 016552 279 REGMVR--GWRGPVAAMDEEVLYGIDENS----------------------CTLSRYDEVMDDWKEVVKSDLLKGARHAA 334 (387)
Q Consensus 279 ~~~~~~--~~~~~~~~~~~~~ly~~~~~~----------------------~~l~~yd~~~~~W~~v~~~~~~~~~~~~~ 334 (387)
+. ++. .+.++++++.+++||++||.+ ..+++||+++++|+++..+|..+..++++
T Consensus 235 ~~-~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 313 (357)
T 2uvk_A 235 AP-VSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL 313 (357)
T ss_dssp CC-SSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE
T ss_pred CC-CCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE
Confidence 76 333 344677888999999999831 25889999999999999988888888889
Q ss_pred EeCCeEEEEecCC------CeEEEEeccCCCCCCceEE
Q 016552 335 AGGGRVCAVCENG------GGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 335 ~~~g~i~v~gg~~------~~i~~~d~~~~~~~~~W~~ 366 (387)
.++++|||+||.+ .++++++.+++ +|..
T Consensus 314 ~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~----~~~~ 347 (357)
T 2uvk_A 314 PWNNSLLIIGGETAGGKAVTDSVLITVKDN----KVTV 347 (357)
T ss_dssp EETTEEEEEEEECGGGCEEEEEEEEEC-CC----SCEE
T ss_pred EeCCEEEEEeeeCCCCCEeeeEEEEEEcCc----EeEe
Confidence 9999999999842 47888999987 8986
No 9
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-33 Score=259.74 Aligned_cols=217 Identities=20% Similarity=0.308 Sum_probs=187.3
Q ss_pred EEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCC
Q 016552 101 HLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGP 180 (387)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~ 180 (387)
.+++||+.+++|..++++|.+ |.++++++++++||++||.........+++++||+.+++|++++
T Consensus 79 ~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~ 143 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLPSA---------------RCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK 143 (318)
T ss_dssp EEEEEETTTTEEEECSCBSSC---------------BCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC
T ss_pred cEEEEeCCCCcEEECCCCCcc---------------ccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC
Confidence 388999999999999988763 55688999999999999976433455678999999999999999
Q ss_pred CCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEee
Q 016552 181 ELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNV 260 (387)
Q Consensus 181 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg 260 (387)
++|.+|..+++++.+++|||+||... .....+++++||+.+++ |+.++++|.++.. +.+++++++||++||
T Consensus 144 ~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~~---~~~~~~~~~iyv~GG 214 (318)
T 2woz_A 144 NLPIKVYGHNVISHNGMIYCLGGKTD--DKKCTNRVFIYNPKKGD----WKDLAPMKTPRSM---FGVAIHKGKIVIAGG 214 (318)
T ss_dssp CCSSCEESCEEEEETTEEEEECCEES--SSCBCCCEEEEETTTTE----EEEECCCSSCCBS---CEEEEETTEEEEEEE
T ss_pred CCCCcccccEEEEECCEEEEEcCCCC--CCCccceEEEEcCCCCE----EEECCCCCCCccc---ceEEEECCEEEEEcC
Confidence 99999999999999999999999854 23457789999999999 9999999977654 778899999999998
Q ss_pred eC-----CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCC--------------CeEEEEeCCCCceeEc
Q 016552 261 KG-----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS--------------CTLSRYDEVMDDWKEV 321 (387)
Q Consensus 261 ~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~--------------~~l~~yd~~~~~W~~v 321 (387)
.. +++++||+++++|+.++. ++..+..+++++.+++||++||.. .++++||+++++|+++
T Consensus 215 ~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 215 VTEDGLSASVEAFDLKTNKWEVMTE-FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EETTEEEEEEEEEETTTCCEEECCC-CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred cCCCCccceEEEEECCCCeEEECCC-CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 64 678999999999999987 777788888899999999999742 4699999999999999
Q ss_pred cccccccCceEEEEeCCeEEEEe
Q 016552 322 VKSDLLKGARHAAAGGGRVCAVC 344 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~g~i~v~g 344 (387)
+|..+..++++.++++||++.
T Consensus 294 --~~~~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 294 --LKEIRYASGASCLATRLNLFK 314 (318)
T ss_dssp --ESCCGGGTTCEEEEEEEEGGG
T ss_pred --cccccccccceeeCCEEEEEE
Confidence 555666677788999999873
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.1e-32 Score=252.45 Aligned_cols=229 Identities=17% Similarity=0.261 Sum_probs=191.0
Q ss_pred eEEeecCCCCCCCCCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccCCCCCCC
Q 016552 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPAL 163 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~ 163 (387)
.+|++++.. .......+++||+.+++|..++++|.+ |.++++++++++||++||... ....
T Consensus 63 ~lyv~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~iyv~GG~~~--~~~~ 123 (302)
T 2xn4_A 63 LVFAVGGFN--GSLRVRTVDSYDPVKDQWTSVANMRDR---------------RSTLGAAVLNGLLYAVGGFDG--STGL 123 (302)
T ss_dssp EEEEESCBC--SSSBCCCEEEEETTTTEEEEECCCSSC---------------CBSCEEEEETTEEEEEEEECS--SCEE
T ss_pred EEEEEeCcC--CCccccceEEECCCCCceeeCCCCCcc---------------ccceEEEEECCEEEEEcCCCC--CccC
Confidence 477777631 111233589999999999999988763 556889999999999999765 3456
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccc
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~ 243 (387)
+++++||+.+++|+++++||.+|..+++++.+++||++||.+.. .....+++++||+.+++ |+.++++|.++..
T Consensus 124 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~~- 197 (302)
T 2xn4_A 124 SSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVA-SRQCLSTVECYNATTNE----WTYIAEMSTRRSG- 197 (302)
T ss_dssp EEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT-TTEECCCEEEEETTTTE----EEEECCCSSCCBS-
T ss_pred ceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCC-CCccccEEEEEeCCCCc----EEECCCCcccccc-
Confidence 78999999999999999999999999999999999999998652 11246789999999999 9999999977654
Q ss_pred cceEEEEECCEEEEEeeeC-----CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCC-----CeEEEEeC
Q 016552 244 EAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLSRYDE 313 (387)
Q Consensus 244 ~~~~~~~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~-----~~l~~yd~ 313 (387)
+.+++++++||++||.. +++++||+++++|+.++. ++..+..+++++.+++||++||.+ ..+++||+
T Consensus 198 --~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 198 --AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD-MNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp --CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred --ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC-CCCccccCeEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 78889999999999974 689999999999999986 677777888888999999999843 35999999
Q ss_pred CCCceeEcc-ccccccCceEEEEeCCeE
Q 016552 314 VMDDWKEVV-KSDLLKGARHAAAGGGRV 340 (387)
Q Consensus 314 ~~~~W~~v~-~~~~~~~~~~~~~~~g~i 340 (387)
++++|+.+. .+|..+..++++.++++|
T Consensus 275 ~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 275 TTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp TTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred CCCeEEECCcccCcccccceEEEecccC
Confidence 999999997 677778788888888775
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=5.6e-32 Score=250.07 Aligned_cols=248 Identities=17% Similarity=0.191 Sum_probs=198.8
Q ss_pred hhhhhHhhhhhhcCCCCCc--e-----eeEEeecCCCCCCCCCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccc
Q 016552 63 LHNVCHSWRRLIYSPSFPP--F-----LSLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLS 135 (387)
Q Consensus 63 ~r~VcK~W~~li~~~~f~~--~-----~~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~ 135 (387)
+....++|..+...|.-.. . -.+|++++. .......+++||+.+++|..++++|.+
T Consensus 29 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~---~~~~~~~~~~~d~~~~~W~~~~~~p~~-------------- 91 (306)
T 3ii7_A 29 FNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGS---QLFPIKRMDCYNVVKDSWYSKLGPPTP-------------- 91 (306)
T ss_dssp EETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCB---SSSBCCEEEEEETTTTEEEEEECCSSC--------------
T ss_pred ecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCC---CCCCcceEEEEeCCCCeEEECCCCCcc--------------
Confidence 3344556776654332211 0 147777764 122334689999999999999888763
Q ss_pred cccceEEEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCC-CCCcc
Q 016552 136 RNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFS-SDVAK 214 (387)
Q Consensus 136 ~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-~~~~~ 214 (387)
|.++++++++++||++||.... ....+++++||+.+++|+++++||.+|..++++..+++||++||...... ....+
T Consensus 92 -r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 92 -RDSLAACAAEGKIYTSGGSEVG-NSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp -CBSCEEEEETTEEEEECCBBTT-BSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECC
T ss_pred -ccceeEEEECCEEEEECCCCCC-CcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccc
Confidence 5668899999999999997632 45678899999999999999999999999999999999999999865211 11278
Q ss_pred eEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeC-----CeEEEEECCCCceeecccccccCCCCc
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGP 289 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~ 289 (387)
++++||+.+++ |+.++++|.++.. +.+++++++||++||.. .++++||+++++|+.++. ++..+..+
T Consensus 170 ~~~~yd~~~~~----W~~~~~~p~~r~~---~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~ 241 (306)
T 3ii7_A 170 SCEVYDPATET----WTELCPMIEARKN---HGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP-MPWKGVTV 241 (306)
T ss_dssp CEEEEETTTTE----EEEECCCSSCCBS---CEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCC-CSCCBSCC
T ss_pred eEEEeCCCCCe----EEECCCccchhhc---ceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCC-CCCCccce
Confidence 99999999999 9999999977654 78889999999999864 689999999999999986 77778888
Q ss_pred EEEEeCCeEEEEeCCC-----CeEEEEeCCCCceeEccccccccCceEEEEeC
Q 016552 290 VAAMDEEVLYGIDENS-----CTLSRYDEVMDDWKEVVKSDLLKGARHAAAGG 337 (387)
Q Consensus 290 ~~~~~~~~ly~~~~~~-----~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~ 337 (387)
++++.+++||++||.+ ..+++||+++++|+.+..+|..+..++++.+.
T Consensus 242 ~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 294 (306)
T 3ii7_A 242 KCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVV 294 (306)
T ss_dssp EEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEE
T ss_pred eEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEEC
Confidence 8888999999999842 57999999999999999888777766666554
No 12
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1e-31 Score=248.74 Aligned_cols=219 Identities=13% Similarity=0.189 Sum_probs=184.9
Q ss_pred ccceEEEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCC-CCCCCcce
Q 016552 137 NLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQ-FSSDVAKS 215 (387)
Q Consensus 137 ~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~ 215 (387)
+.++.++.+++.||++||. . ....+++++||+.+++|++++++|.+|..+++++.+++||++||.... ......++
T Consensus 15 ~~~~~~~~~~~~i~v~GG~-~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 91 (308)
T 1zgk_A 15 PRGSHAPKVGRLIYTAGGY-F--RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSA 91 (308)
T ss_dssp ------CCCCCCEEEECCB-S--SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCC
T ss_pred eCCccccCCCCEEEEEeCc-C--CCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecce
Confidence 5567888899999999997 2 356788999999999999999999999999999999999999998310 01245678
Q ss_pred EEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeC-----CeEEEEECCCCceeecccccccCCCCcE
Q 016552 216 VEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGPV 290 (387)
Q Consensus 216 v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~ 290 (387)
+++||+.+++ |+.++++|.+|.. +.+++++++||++||.. +++++||+.+++|+.++. ++..+..++
T Consensus 92 ~~~~d~~~~~----W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~ 163 (308)
T 1zgk_A 92 LDCYNPMTNQ----WSPCAPMSVPRNR---IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP-MLTRRIGVG 163 (308)
T ss_dssp EEEEETTTTE----EEECCCCSSCCBT---CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCC-CSSCCBSCE
T ss_pred EEEECCCCCe----EeECCCCCcCccc---cEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCC-CCccccceE
Confidence 9999999999 9999999977654 78889999999999864 689999999999999987 777888888
Q ss_pred EEEeCCeEEEEeCCC-----CeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCC-----CeEEEEeccCCCC
Q 016552 291 AAMDEEVLYGIDENS-----CTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG-----GGIVVVDVKAAAA 360 (387)
Q Consensus 291 ~~~~~~~ly~~~~~~-----~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~-----~~i~~~d~~~~~~ 360 (387)
+++.+++||++||.. ..+++||+++++|+.+..+|..+..++++.++++|||+||.+ ..+++||+.+.
T Consensus 164 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-- 241 (308)
T 1zgk_A 164 VAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE-- 241 (308)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT--
T ss_pred EEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC--
Confidence 899999999999843 469999999999999998888888888899999999999853 67999999987
Q ss_pred CCceEE--eCCC
Q 016552 361 PTIFVV--DTPL 370 (387)
Q Consensus 361 ~~~W~~--~~p~ 370 (387)
+|+. .+|.
T Consensus 242 --~W~~~~~~p~ 251 (308)
T 1zgk_A 242 --TWTFVAPMKH 251 (308)
T ss_dssp --EEEECCCCSS
T ss_pred --cEEECCCCCC
Confidence 9996 4553
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.7e-31 Score=243.91 Aligned_cols=246 Identities=15% Similarity=0.219 Sum_probs=198.5
Q ss_pred hhhhhhHhhhhhhcCCCCCce-------eeEEeecCCCCCCCCCCeEEEEEeCCCCC---eecCCCCCCCCcccccccCC
Q 016552 62 ILHNVCHSWRRLIYSPSFPPF-------LSLYALFSPKSNSSSTPIHLFTFDPVSST---WDPLPRPPPDPPLHLILHHP 131 (387)
Q Consensus 62 ~~r~VcK~W~~li~~~~f~~~-------~~l~~~~~~~~~~~~~~~~~~~~d~~~~~---W~~l~~~p~~p~~~~~~~~~ 131 (387)
.+....++|..+...|.-... ..+|++++.. .......+++||+.+++ |..++++|.+
T Consensus 35 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~--~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~---------- 102 (301)
T 2vpj_A 35 KYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYD--GRSRLSSVECLDYTADEDGVWYSVAPMNVR---------- 102 (301)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC--SSCBCCCEEEEETTCCTTCCCEEECCCSSC----------
T ss_pred EEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCC--CCccCceEEEEECCCCCCCeeEECCCCCCC----------
Confidence 334445667666544332110 1477777631 11223358999999999 9999888763
Q ss_pred CccccccceEEEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCC
Q 016552 132 SFLSRNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSD 211 (387)
Q Consensus 132 ~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 211 (387)
|..+++++.+++||++||... ....+++++||+.+++|++++++|.+|..+++++.+++||++||.+. ..
T Consensus 103 -----r~~~~~~~~~~~lyv~GG~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~ 172 (301)
T 2vpj_A 103 -----RGLAGATTLGDMIYVSGGFDG--SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDG---LN 172 (301)
T ss_dssp -----CBSCEEEEETTEEEEECCBCS--SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCS---SC
T ss_pred -----ccceeEEEECCEEEEEcccCC--CcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCC---Cc
Confidence 556889999999999999765 34578899999999999999999999999999999999999999865 23
Q ss_pred CcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeC-----CeEEEEECCCCceeecccccccCC
Q 016552 212 VAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGW 286 (387)
Q Consensus 212 ~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~ 286 (387)
..+++++||+.+++ |+.++++|.++.. +.+++++++||++||.. +++++||+++++|++++. ++..+
T Consensus 173 ~~~~~~~~d~~~~~----W~~~~~~p~~r~~---~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~r 244 (301)
T 2vpj_A 173 ILNSVEKYDPHTGH----WTNVTPMATKRSG---AGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS-MTTPR 244 (301)
T ss_dssp BCCCEEEEETTTTE----EEEECCCSSCCBS---CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECC-CSSCC
T ss_pred ccceEEEEeCCCCc----EEeCCCCCccccc---ceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCC-CCCcc
Confidence 57789999999999 9999999977654 78889999999999974 689999999999999986 67777
Q ss_pred CCcEEEEeCCeEEEEeCCC-----CeEEEEeCCCCceeEccccccccCceEEEEeC
Q 016552 287 RGPVAAMDEEVLYGIDENS-----CTLSRYDEVMDDWKEVVKSDLLKGARHAAAGG 337 (387)
Q Consensus 287 ~~~~~~~~~~~ly~~~~~~-----~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~ 337 (387)
..+++++.+++||++||.+ ..+++||+++++|+.+..+|..+..++++.++
T Consensus 245 ~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 245 CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp BSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred cceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 7888888999999999853 36899999999999999988877777666653
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.98 E-value=2.7e-30 Score=244.01 Aligned_cols=217 Identities=13% Similarity=0.085 Sum_probs=173.1
Q ss_pred ccceEEEEECCEEEEEecccCCCCCCCCccEEEecc--CCceeeCCCCC-CCCcceeEEEeCCEEEEEecC-CC-CCCCC
Q 016552 137 NLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPI--CRTWTFGPELV-TPRRWCAAGCSRGAVYVASGI-GS-QFSSD 211 (387)
Q Consensus 137 ~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~--t~~W~~l~~~p-~~r~~~~~~~~~~~iyv~GG~-~~-~~~~~ 211 (387)
|.++.++.++++||++||... +++++||+. +++|+++++|| .+|..+++++++++|||+||. .. .....
T Consensus 10 r~~~~~~~~~~~iyv~GG~~~------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~ 83 (357)
T 2uvk_A 10 FKSGTGAIDNDTVYIGLGSAG------TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQ 83 (357)
T ss_dssp CCSCEEEEETTEEEEECGGGT------TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEE
T ss_pred ccceEEEEECCEEEEEeCcCC------CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccce
Confidence 455777888999999999753 379999998 49999999999 899999999999999999998 31 11124
Q ss_pred CcceEEEEECCCCccccCeEEcCCCC-CCCccccceEEEEECCEEEEEeeeC----------------------------
Q 016552 212 VAKSVEKWDLMNGEKNSRWEKTGELK-DGRFSREAIDAVGWKGKLCLVNVKG---------------------------- 262 (387)
Q Consensus 212 ~~~~v~~yd~~~~~~~~~W~~~~~~p-~~~~~~~~~~~~~~~g~lyv~gg~~---------------------------- 262 (387)
.++++++||+.+++ |+.+++|+ .+|.. +++++++++||++||..
T Consensus 84 ~~~~v~~yd~~~~~----W~~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 84 VFNDVHKYNPKTNS----WVKLMSHAPMGMAG---HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp ECCCEEEEETTTTE----EEECSCCCSSCCSS---EEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eeccEEEEeCCCCc----EEECCCCCCccccc---ceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 57789999999999 99999988 55543 77888999999999853
Q ss_pred -----------CeEEEEECCCCceeecccccccCC-CCcEEEEeCCeEEEEeCC------CCeEEEEeC--CCCceeEcc
Q 016552 263 -----------AEGAVYDVVANTWDDMREGMVRGW-RGPVAAMDEEVLYGIDEN------SCTLSRYDE--VMDDWKEVV 322 (387)
Q Consensus 263 -----------~~i~~yD~~~~~W~~~~~~~~~~~-~~~~~~~~~~~ly~~~~~------~~~l~~yd~--~~~~W~~v~ 322 (387)
+++++||+.+++|+.++. ++... .++++++.+++||++||. ...+++||+ ++++|+.+.
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~ 235 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA 235 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEEE-CSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECC
T ss_pred ccccccccCCcccEEEEeCCCCcEEECCC-CCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecC
Confidence 589999999999999976 55443 458888899999999973 346888976 999999998
Q ss_pred cccccc--CceEEEEeCCeEEEEecCC----------------------CeEEEEeccCCCCCCceEE--eCCCC
Q 016552 323 KSDLLK--GARHAAAGGGRVCAVCENG----------------------GGIVVVDVKAAAAPTIFVV--DTPLG 371 (387)
Q Consensus 323 ~~~~~~--~~~~~~~~~g~i~v~gg~~----------------------~~i~~~d~~~~~~~~~W~~--~~p~~ 371 (387)
.++..+ ..++++.++++|||+||.+ ..+++||+.+. +|.. .+|..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~----~W~~~~~~p~~ 306 (357)
T 2uvk_A 236 PVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG----KWDKSGELSQG 306 (357)
T ss_dssp CSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-------CEEEEECSSC
T ss_pred CCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC----ceeeCCCCCCC
Confidence 876543 3566889999999999832 36899999987 8995 55543
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=6.3e-29 Score=253.92 Aligned_cols=236 Identities=9% Similarity=0.104 Sum_probs=183.1
Q ss_pred eEEeecCCCCCCCCCCeEEEEEeCCCCCeecCC-CCCCCCcccccccCCCccccccceEEEEE--CCEEEEEecccCCCC
Q 016552 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLP-RPPPDPPLHLILHHPSFLSRNLPVQLVSL--SGKLILLAATTHNFN 160 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~l~v~GG~~~~~~ 160 (387)
.+|++++.. ......+++||+.+++|..++ ++|... . ...|.+|+++++ +++||++||.... .
T Consensus 399 ~iyv~GG~~---~~~~~~v~~yd~~~~~W~~~~~~~p~~~-~---------p~~R~~hs~~~~~~~~~lyv~GG~~~~-~ 464 (695)
T 2zwa_A 399 DVFYMGGSN---PYRVNEILQLSIHYDKIDMKNIEVSSSE-V---------PVARMCHTFTTISRNNQLLLIGGRKAP-H 464 (695)
T ss_dssp CEEEECCBS---SSBCCCEEEEEECSSCEEEEECCCCCSC-C---------CCCCBSCEEEEETTTTEEEEECCBSST-T
T ss_pred EEEEECCCC---CCCcCcEEEEECCCCeEEEeccCCCCCC-C---------CccccceEEEEEccCCEEEEEcCCCCC-C
Confidence 367776631 122335899999999999988 643110 0 122677999999 9999999997653 2
Q ss_pred CCCCccEEEeccCCceeeCCCCCCCCcceeEEEe-CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCC---C
Q 016552 161 PALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGE---L 236 (387)
Q Consensus 161 ~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~---~ 236 (387)
...+++++||+.+++|+.+++||.+|..|+++++ +++|||+||.+.. . ++++||+.+++ |+.+++ +
T Consensus 465 ~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~--~----~v~~yd~~t~~----W~~~~~~g~~ 534 (695)
T 2zwa_A 465 QGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEG--P----AMLLYNVTEEI----FKDVTPKDEF 534 (695)
T ss_dssp CBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSS--C----SEEEEETTTTE----EEECCCSSGG
T ss_pred CccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCC--C----CEEEEECCCCc----eEEccCCCCC
Confidence 3678899999999999999999999999999996 9999999998662 1 89999999999 999986 7
Q ss_pred CCCCccccceEEEEEC---CEEEEEeeeC-------CeEEEEECCCCc------eeecccccccCCCCcEEEEeC-CeEE
Q 016552 237 KDGRFSREAIDAVGWK---GKLCLVNVKG-------AEGAVYDVVANT------WDDMREGMVRGWRGPVAAMDE-EVLY 299 (387)
Q Consensus 237 p~~~~~~~~~~~~~~~---g~lyv~gg~~-------~~i~~yD~~~~~------W~~~~~~~~~~~~~~~~~~~~-~~ly 299 (387)
|.++.. +++++++ ++||++||.. +++++||+.+++ |+.+...++.++.++++++.+ ++||
T Consensus 535 p~~r~~---~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iy 611 (695)
T 2zwa_A 535 FQNSLV---SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLL 611 (695)
T ss_dssp GGSCCB---SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEE
T ss_pred CCcccc---eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEE
Confidence 766654 6667777 8999999972 679999999999 888876335667788888888 9999
Q ss_pred EEeCC--------CCeEEEEeCCCCceeEccccc-------cccCceEEEEeCC-eEEEEecC
Q 016552 300 GIDEN--------SCTLSRYDEVMDDWKEVVKSD-------LLKGARHAAAGGG-RVCAVCEN 346 (387)
Q Consensus 300 ~~~~~--------~~~l~~yd~~~~~W~~v~~~~-------~~~~~~~~~~~~g-~i~v~gg~ 346 (387)
++||. ...+++||+++++|+.+..+. +.+..++++.+++ +|||+||+
T Consensus 612 v~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 612 IVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp EECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred EECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 99983 346999999999999754321 2234566777665 99999985
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=7.8e-28 Score=245.82 Aligned_cols=214 Identities=9% Similarity=0.070 Sum_probs=178.5
Q ss_pred cccceEEEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCC-C-----CCCCCcceeEEEe--CCEEEEEecCCCC
Q 016552 136 RNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGP-E-----LVTPRRWCAAGCS--RGAVYVASGIGSQ 207 (387)
Q Consensus 136 ~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~-~-----~p~~r~~~~~~~~--~~~iyv~GG~~~~ 207 (387)
+|+++. ++.+++||++||... ...+++++||+.+++|+.++ + ||.+|..|+++++ +++|||+||.+.
T Consensus 388 rr~g~~-~~~~~~iyv~GG~~~---~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~- 462 (695)
T 2zwa_A 388 RKFGDV-DVAGNDVFYMGGSNP---YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA- 462 (695)
T ss_dssp CBSCEE-EECSSCEEEECCBSS---SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS-
T ss_pred CceeEE-EEECCEEEEECCCCC---CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC-
Confidence 355544 448999999999754 45678999999999999988 6 7899999999999 999999999876
Q ss_pred CCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE-CCEEEEEeeeC--CeEEEEECCCCceeeccc--cc
Q 016552 208 FSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW-KGKLCLVNVKG--AEGAVYDVVANTWDDMRE--GM 282 (387)
Q Consensus 208 ~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~-~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~--~~ 282 (387)
....++++++||+.+++ |+.++++|.+|.. ++++++ +++||++||.. .++++||+.+++|+.++. .+
T Consensus 463 -~~~~~~dv~~yd~~t~~----W~~~~~~p~~R~~---h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~ 534 (695)
T 2zwa_A 463 -PHQGLSDNWIFDMKTRE----WSMIKSLSHTRFR---HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEF 534 (695)
T ss_dssp -TTCBCCCCEEEETTTTE----EEECCCCSBCCBS---CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGG
T ss_pred -CCCccccEEEEeCCCCc----EEECCCCCCCccc---ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCC
Confidence 23357889999999999 9999999987765 778885 99999999976 379999999999999975 25
Q ss_pred ccCCCCcEEEEeC---CeEEEEeCC-------CCeEEEEeCCCCc------eeEccccc-cccCceEEEEeC-CeEEEEe
Q 016552 283 VRGWRGPVAAMDE---EVLYGIDEN-------SCTLSRYDEVMDD------WKEVVKSD-LLKGARHAAAGG-GRVCAVC 344 (387)
Q Consensus 283 ~~~~~~~~~~~~~---~~ly~~~~~-------~~~l~~yd~~~~~------W~~v~~~~-~~~~~~~~~~~~-g~i~v~g 344 (387)
+..+.++++++.+ ++||++||. ...+++||+++++ |+.+..+| ..+..++++.++ |+|||+|
T Consensus 535 p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~G 614 (695)
T 2zwa_A 535 FQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVG 614 (695)
T ss_dssp GGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEEC
T ss_pred CCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEEC
Confidence 6677777766655 789999984 2469999999999 89888754 566677888888 9999999
Q ss_pred cC--------CCeEEEEeccCCCCCCceEE
Q 016552 345 EN--------GGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 345 g~--------~~~i~~~d~~~~~~~~~W~~ 366 (387)
|. ...+++||+.+. .|..
T Consensus 615 G~~~~~~~~~~~~v~~yd~~t~----~W~~ 640 (695)
T 2zwa_A 615 GTSPSGLFDRTNSIISLDPLSE----TLTS 640 (695)
T ss_dssp CBCSSCCCCTTTSEEEEETTTT----EEEE
T ss_pred CccCCCCCCCCCeEEEEECCCC----eEEE
Confidence 83 357999999988 9985
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=1.3e-26 Score=236.19 Aligned_cols=267 Identities=10% Similarity=0.055 Sum_probs=191.0
Q ss_pred hHhhhhhhcCCCCCce---e----eEEeecCCCCCC----CCCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccc
Q 016552 67 CHSWRRLIYSPSFPPF---L----SLYALFSPKSNS----SSTPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLS 135 (387)
Q Consensus 67 cK~W~~li~~~~f~~~---~----~l~~~~~~~~~~----~~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~ 135 (387)
..+|..+...|..... . .+|++++..... ......+++||+.+++|..++.+|....
T Consensus 175 ~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~------------ 242 (656)
T 1k3i_A 175 LGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD------------ 242 (656)
T ss_dssp SCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC------------
T ss_pred CCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC------------
Confidence 3567666655543211 1 366665431100 0122358899999999999987765211
Q ss_pred cccceEEE-EECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEe-CCEEEEEecCCCCCCCCCc
Q 016552 136 RNLPVQLV-SLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS-RGAVYVASGIGSQFSSDVA 213 (387)
Q Consensus 136 ~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 213 (387)
..+++++ ..+++||++||... .++++||+.+++|.++++|+.+|..++++++ +++|||+||... .....
T Consensus 243 -~~~~~~~~~~~g~lyv~GG~~~------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~--~~~~~ 313 (656)
T 1k3i_A 243 -MFCPGISMDGNGQIVVTGGNDA------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWS--GGVFE 313 (656)
T ss_dssp -CSSCEEEECTTSCEEEECSSST------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCC--SSSCC
T ss_pred -CccccccCCCCCCEEEeCCCCC------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCccc--CCccc
Confidence 1223333 46899999999643 2799999999999999999999999998888 999999999543 13456
Q ss_pred ceEEEEECCCCccccCeEEcC-----CCCCCCccccceEEEEECCEEEEEeeeC---------CeEEEEECCCCceeecc
Q 016552 214 KSVEKWDLMNGEKNSRWEKTG-----ELKDGRFSREAIDAVGWKGKLCLVNVKG---------AEGAVYDVVANTWDDMR 279 (387)
Q Consensus 214 ~~v~~yd~~~~~~~~~W~~~~-----~~p~~~~~~~~~~~~~~~g~lyv~gg~~---------~~i~~yD~~~~~W~~~~ 279 (387)
+++++||+.+++ |+.++ +|+..+. ..++..++++|+++|.. ..++.||+++++|....
T Consensus 314 ~~~e~yd~~t~~----W~~~~~~~~~p~~~~~~----~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~ 385 (656)
T 1k3i_A 314 KNGEVYSPSSKT----WTSLPNAKVNPMLTADK----QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA 385 (656)
T ss_dssp CCEEEEETTTTE----EEEETTSCSGGGCCCCT----TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE
T ss_pred ccceEeCCCCCc----ceeCCCccccccccccc----cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecC
Confidence 789999999999 99984 4443322 23445689999998643 67899999999987543
Q ss_pred ccccc------CCCCcEEE---EeCCeEEEEeCCC--------C---eEEEEeCCCCceeEcc--ccccccCceEEEEe-
Q 016552 280 EGMVR------GWRGPVAA---MDEEVLYGIDENS--------C---TLSRYDEVMDDWKEVV--KSDLLKGARHAAAG- 336 (387)
Q Consensus 280 ~~~~~------~~~~~~~~---~~~~~ly~~~~~~--------~---~l~~yd~~~~~W~~v~--~~~~~~~~~~~~~~- 336 (387)
...+. .....+++ ..+++||++||.. . .+.+||+++++|.++. .+|..+..+.++.+
T Consensus 386 ~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~ 465 (656)
T 1k3i_A 386 GKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLP 465 (656)
T ss_dssp EECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECT
T ss_pred CccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECC
Confidence 32222 11223333 2589999999842 2 6889999999999986 77777777777776
Q ss_pred CCeEEEEecCC-----------CeEEEEeccCCCCCCceEE
Q 016552 337 GGRVCAVCENG-----------GGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 337 ~g~i~v~gg~~-----------~~i~~~d~~~~~~~~~W~~ 366 (387)
+|+|||+||.. ..+++||+.+. +|..
T Consensus 466 ~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~----~W~~ 502 (656)
T 1k3i_A 466 DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD----TFYK 502 (656)
T ss_dssp TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT----EEEE
T ss_pred CCCEEEECCcccCcCcCCCCcccceEEEcCCCC----ceee
Confidence 99999999842 56899999987 9996
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.92 E-value=1.6e-24 Score=220.63 Aligned_cols=236 Identities=11% Similarity=0.057 Sum_probs=176.4
Q ss_pred eEEeecCCCCCCCCCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEE-CCEEEEEecccCCCCCC
Q 016552 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSL-SGKLILLAATTHNFNPA 162 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~ 162 (387)
.+|++++. .. ..+++||+.+++|..+++|+.. |..++++++ +++||++||.... ...
T Consensus 255 ~lyv~GG~----~~--~~v~~yd~~t~~W~~~~~~~~~---------------R~~~s~~~~~dg~iyv~GG~~~~-~~~ 312 (656)
T 1k3i_A 255 QIVVTGGN----DA--KKTSLYDSSSDSWIPGPDMQVA---------------RGYQSSATMSDGRVFTIGGSWSG-GVF 312 (656)
T ss_dssp CEEEECSS----ST--TCEEEEEGGGTEEEECCCCSSC---------------CSSCEEEECTTSCEEEECCCCCS-SSC
T ss_pred CEEEeCCC----CC--CceEEecCcCCceeECCCCCcc---------------ccccceEEecCCeEEEEeCcccC-Ccc
Confidence 46777653 11 2689999999999999988763 556788888 9999999994322 336
Q ss_pred CCccEEEeccCCceeeC-----CCCCCCCcceeEEEeCCEEEEEecCCCC-CCCCCcceEEEEECCCCccccCeEEcCCC
Q 016552 163 LTRPLIFDPICRTWTFG-----PELVTPRRWCAAGCSRGAVYVASGIGSQ-FSSDVAKSVEKWDLMNGEKNSRWEKTGEL 236 (387)
Q Consensus 163 ~~~~~vyd~~t~~W~~l-----~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~v~~yd~~~~~~~~~W~~~~~~ 236 (387)
.+++++||+.+++|+.+ ++|+..|.. +++..++++|++||.+.. +.....+.++.||+.++. |......
T Consensus 313 ~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~----w~~~~~~ 387 (656)
T 1k3i_A 313 EKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSG----DVKSAGK 387 (656)
T ss_dssp CCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTC----EEEEEEE
T ss_pred cccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcc----eeecCCc
Confidence 67899999999999997 466666654 555678999999998542 111245789999999999 8754321
Q ss_pred CCC----CccccceEEEE---ECCEEEEEeeeC--------C---eEEEEECCCCceeecc-cccccCCCCcEEEEe-CC
Q 016552 237 KDG----RFSREAIDAVG---WKGKLCLVNVKG--------A---EGAVYDVVANTWDDMR-EGMVRGWRGPVAAMD-EE 296 (387)
Q Consensus 237 p~~----~~~~~~~~~~~---~~g~lyv~gg~~--------~---~i~~yD~~~~~W~~~~-~~~~~~~~~~~~~~~-~~ 296 (387)
+.. ...+..+.+++ .+++||++||.. . .+++||+.+++|.++. ..++.++..+++++. +|
T Consensus 388 ~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g 467 (656)
T 1k3i_A 388 RQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDG 467 (656)
T ss_dssp CEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTS
T ss_pred cccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCC
Confidence 110 00111233443 489999999953 2 7899999999999886 347778777777766 99
Q ss_pred eEEEEeCCC-----------CeEEEEeCCCCceeEccccccccCceEEEEe--CCeEEEEecC
Q 016552 297 VLYGIDENS-----------CTLSRYDEVMDDWKEVVKSDLLKGARHAAAG--GGRVCAVCEN 346 (387)
Q Consensus 297 ~ly~~~~~~-----------~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~--~g~i~v~gg~ 346 (387)
+||++||.+ ..+++||+++++|+.+..++..+..+.++.+ +|+||++||+
T Consensus 468 ~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 468 STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 999999842 4589999999999999988877777766666 9999999985
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.25 E-value=2.8e-09 Score=102.59 Aligned_cols=186 Identities=9% Similarity=0.041 Sum_probs=108.6
Q ss_pred EEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEEC
Q 016552 142 LVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 142 ~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 221 (387)
++...+.+++.|+.++ .+.+||..+++-.. .+........+...+++.++.|+.+. .+.+||.
T Consensus 164 ~~~~~~~~l~s~~~dg-------~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~l~s~s~dg--------~i~~wd~ 226 (445)
T 2ovr_B 164 SSQMRDNIIISGSTDR-------TLKVWNAETGECIH--TLYGHTSTVRCMHLHEKRVVSGSRDA--------TLRVWDI 226 (445)
T ss_dssp EEEEETTEEEEEETTS-------CEEEEETTTTEEEE--EECCCSSCEEEEEEETTEEEEEETTS--------EEEEEES
T ss_pred EEEecCCEEEEEeCCC-------eEEEEECCcCcEEE--EECCCCCcEEEEEecCCEEEEEeCCC--------EEEEEEC
Confidence 3444466666666432 58899998875432 12222222223334555666666544 7889999
Q ss_pred CCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEE
Q 016552 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGI 301 (387)
Q Consensus 222 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~ 301 (387)
.+.+ -...-.-... ...++..++..++.++.+..+.+||+.+.+-...-. .......++.. ++..++.
T Consensus 227 ~~~~----~~~~~~~~~~-----~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~-~~~~l~~ 294 (445)
T 2ovr_B 227 ETGQ----CLHVLMGHVA-----AVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ--GHTNRVYSLQF-DGIHVVS 294 (445)
T ss_dssp SSCC----EEEEEECCSS-----CEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEEC--CCSSCEEEEEE-CSSEEEE
T ss_pred CCCc----EEEEEcCCcc-----cEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEec--CCCCceEEEEE-CCCEEEE
Confidence 8876 3221111111 133455588877777777889999988764321111 00111223334 5666677
Q ss_pred eCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 302 DENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 302 ~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++.++.+..||..+.+-. ...............++..++.|+.++.+.+||+.+.
T Consensus 295 ~~~d~~i~i~d~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 295 GSLDTSIRVWDVETGNCI--HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp EETTSCEEEEETTTCCEE--EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred EeCCCeEEEEECCCCCEE--EEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCC
Confidence 777889999999876432 2222233344455566778888888888999999754
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.16 E-value=1.9e-09 Score=103.48 Aligned_cols=281 Identities=16% Similarity=0.109 Sum_probs=154.8
Q ss_pred CCCCCCChHH----HHHHHhhhcC---chhhhhhhHhhhhhhcCCCCCceeeEEeecCCC------CCCCCC----CeEE
Q 016552 40 QPLLPGLPDH----IAHLCLSHVH---PSILHNVCHSWRRLIYSPSFPPFLSLYALFSPK------SNSSST----PIHL 102 (387)
Q Consensus 40 ~~~~~~LPdd----l~~~iL~rLP---l~~~r~VcK~W~~li~~~~f~~~~~l~~~~~~~------~~~~~~----~~~~ 102 (387)
...+..||+| |+..||++|+ |.++..|||+|+.++.++.+.+.++...+.... ...... ....
T Consensus 8 ~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 87 (435)
T 1p22_A 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 87 (435)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC----
T ss_pred cChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCC
Confidence 3456789999 9999999999 899999999999999987653221100000000 000000 0000
Q ss_pred EEEeCC-------------------CCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccCCCCCCC
Q 016552 103 FTFDPV-------------------SSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPAL 163 (387)
Q Consensus 103 ~~~d~~-------------------~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~ 163 (387)
...++. ...|........ .+.+|.. ...+..++..++..++.|+.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~-----~~~~~~~---~~~~v~~~~~d~~~l~~g~~dg------ 153 (435)
T 1p22_A 88 PDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQ-----RIHCRSE---TSKGVYCLQYDDQKIVSGLRDN------ 153 (435)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCC-----CEECCCS---SCCCEEEEECCSSEEEEEESSS------
T ss_pred CCCCCCchhhHHhhhhhhhcchhHHHhhhccCCccce-----EEecccC---CCCcEEEEEECCCEEEEEeCCC------
Confidence 000000 112322111110 0001110 0112445556777888877433
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccc
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~ 243 (387)
.+.+||..+.+-... +........+...++++++.|+.+. .+.+||..+++ -...-....
T Consensus 154 -~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~dg--------~i~vwd~~~~~----~~~~~~~h~----- 213 (435)
T 1p22_A 154 -TIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSDS--------TVRVWDVNTGE----MLNTLIHHC----- 213 (435)
T ss_dssp -CEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETTS--------CEEEEESSSCC----EEEEECCCC-----
T ss_pred -eEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCCC--------eEEEEECCCCc----EEEEEcCCC-----
Confidence 688999887654332 2222222233344778888887654 78899998887 432221111
Q ss_pred cceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCC--CcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEc
Q 016552 244 EAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWR--GPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEV 321 (387)
Q Consensus 244 ~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~--~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v 321 (387)
....++..++...+.++.+..+.+||..+..-..... ...+.. ..++.. ++..++.++.++.+.+||.++.+- +
T Consensus 214 ~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~--~ 289 (435)
T 1p22_A 214 EAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR-VLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEF--V 289 (435)
T ss_dssp SCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEE-EECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCE--E
T ss_pred CcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeee-EecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcE--E
Confidence 1133455566666777777889999998765321111 111111 223334 455566666788999999987643 2
Q ss_pred cccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 322 VKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
...........++..++..++.|+..+.|.+||+.+.
T Consensus 290 ~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 290 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred EEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCC
Confidence 2333333444555667888888888888999998854
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.11 E-value=1.8e-08 Score=97.22 Aligned_cols=187 Identities=11% Similarity=-0.001 Sum_probs=103.1
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCC-cceeEEE---eCCEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPR-RWCAAGC---SRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r-~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
+.+++.|+.+ ..+.+||..+++-... +.... ...+... -+++.++.|+.+. .+.+||..
T Consensus 173 ~~~l~s~s~d-------g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~~l~s~s~d~--------~i~vwd~~ 235 (464)
T 3v7d_B 173 GGILVSGSTD-------RTVRVWDIKKGCCTHV--FEGHNSTVRCLDIVEYKNIKYIVTGSRDN--------TLHVWKLP 235 (464)
T ss_dssp TTEEEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCEEEEEEEESSSCEEEEEEETTS--------CEEEEECC
T ss_pred CCEEEEEeCC-------CCEEEEECCCCcEEEE--ECCCCCccEEEEEecCCCCCEEEEEcCCC--------cEEEeeCC
Confidence 4466666643 3588999988754331 11111 1111222 2457777777644 67788877
Q ss_pred CCccccCeEEcCCCC----------C--------CCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccc
Q 016552 223 NGEKNSRWEKTGELK----------D--------GRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVR 284 (387)
Q Consensus 223 ~~~~~~~W~~~~~~p----------~--------~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~ 284 (387)
+.. -....... . .........++..++.+.+.++.+..+.+||..+.+-...-...
T Consensus 236 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-- 309 (464)
T 3v7d_B 236 KES----SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH-- 309 (464)
T ss_dssp CCC----CC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC--
T ss_pred CCc----ccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC--
Confidence 665 11100000 0 00000112233455666667776778999999876532211101
Q ss_pred CCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 285 GWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 285 ~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.....+++. .++..++.++.++.|.+||.++.+ .+............+..++..++.|+..+.+.+||+.+.
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGE--LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTC
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--EEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCC
Confidence 111122333 245666677778899999998764 333333344455566667888888888888999999864
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.71 E-value=4.8e-09 Score=69.17 Aligned_cols=42 Identities=24% Similarity=0.285 Sum_probs=35.8
Q ss_pred CCCCCCCChHHHHHHHhhhcC---chhhhhhhHhhhhhhcCCCCC
Q 016552 39 HQPLLPGLPDHIAHLCLSHVH---PSILHNVCHSWRRLIYSPSFP 80 (387)
Q Consensus 39 ~~~~~~~LPddl~~~iL~rLP---l~~~r~VcK~W~~li~~~~f~ 80 (387)
....|..||+||+.+||++|| +.+++.|||+|+.++.++.|.
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 345689999999999999999 889999999999999998773
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.68 E-value=4.9e-06 Score=76.65 Aligned_cols=215 Identities=13% Similarity=-0.038 Sum_probs=125.6
Q ss_pred eEEEEEeCCCCCe-ecCCCCCCCCcccccccCCCccccccceEEEE-ECCEEEEEecccCCCCCCCCccEEEeccCCcee
Q 016552 100 IHLFTFDPVSSTW-DPLPRPPPDPPLHLILHHPSFLSRNLPVQLVS-LSGKLILLAATTHNFNPALTRPLIFDPICRTWT 177 (387)
Q Consensus 100 ~~~~~~d~~~~~W-~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~ 177 (387)
..+.++|+.+.+- ..++.... ...++. .++++|+.... ...+.++|+.|++-.
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~------------------p~~i~~~~~g~lyv~~~~-------~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTS------------------PRYIHFLSDEKAYVTQIW-------DYRIFIINPKTYEIT 118 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSS------------------EEEEEEEETTEEEEEEBS-------CSEEEEEETTTTEEE
T ss_pred CEEEEEECcccEEEEEcCCCCC------------------CcEEEEeCCCeEEEEECC-------CCeEEEEECCCCeEE
Confidence 3578899988665 33432211 134444 67899998642 247899999998755
Q ss_pred eCCCCCCC----CcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECC
Q 016552 178 FGPELVTP----RRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKG 253 (387)
Q Consensus 178 ~l~~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g 253 (387)
..-+.... ..-...+..++++||..-. ..+.+.++|+.+++ ....-+... .. . .....-+|
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-------~~~~v~viD~~t~~----~~~~i~~g~--~p-~-~i~~~~dG 183 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQYGKYVYVNCWS-------YQNRILKIDTETDK----VVDELTIGI--QP-T-SLVMDKYN 183 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEEETTEEEEEECT-------TCCEEEEEETTTTE----EEEEEECSS--CB-C-CCEECTTS
T ss_pred EEEEcCCccccCCCcceEEEECCEEEEEcCC-------CCCEEEEEECCCCe----EEEEEEcCC--Cc-c-ceEEcCCC
Confidence 31111110 0112233478899998421 12378999999988 543222211 11 0 12333468
Q ss_pred EEEEEeeeC----------CeEEEEECCCCceeecccccccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceeEc
Q 016552 254 KLCLVNVKG----------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSRYDEVMDDWKEV 321 (387)
Q Consensus 254 ~lyv~gg~~----------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W~~v 321 (387)
++|+..... ..+.++|+++++....-. .+.+.....+++. ++.||+... .+++||+++.+....
T Consensus 184 ~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~-~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~ 259 (328)
T 3dsm_A 184 KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK-FKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVR 259 (328)
T ss_dssp EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE-CCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSS
T ss_pred CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe-cCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeee
Confidence 999886432 579999999887542211 2222222345554 567888743 899999998765322
Q ss_pred ccccc-ccCceEEEE--eCCeEEEEe----cCCCeEEEEeccCC
Q 016552 322 VKSDL-LKGARHAAA--GGGRVCAVC----ENGGGIVVVDVKAA 358 (387)
Q Consensus 322 ~~~~~-~~~~~~~~~--~~g~i~v~g----g~~~~i~~~d~~~~ 358 (387)
...+. ...+..++. .+++||+.. ..++.|.+||++.+
T Consensus 260 ~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 260 PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGK 303 (328)
T ss_dssp CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCC
T ss_pred eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCC
Confidence 21121 123444444 368899997 55678999999843
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.62 E-value=3.3e-05 Score=71.02 Aligned_cols=178 Identities=6% Similarity=-0.071 Sum_probs=110.4
Q ss_pred CCccEEEeccCCceeeCC-----CCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCe-EEcCCC
Q 016552 163 LTRPLIFDPICRTWTFGP-----ELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRW-EKTGEL 236 (387)
Q Consensus 163 ~~~~~vyd~~t~~W~~l~-----~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W-~~~~~~ 236 (387)
...+.++|+.|+++..-- ..+........+..++++|+..... ..+.++|+.+.+ - ..++..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~--------~~v~viD~~t~~----~~~~i~~~ 83 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNS--------HVIFAIDINTFK----EVGRITGF 83 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGG--------TEEEEEETTTCC----EEEEEECC
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCC--------CEEEEEECcccE----EEEEcCCC
Confidence 457899999999886521 1111122234456789999986532 378999999888 4 234322
Q ss_pred CCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCcee-ecccccccC--CCCcEEEEeCCeEEEEeC-CCCeEEEEe
Q 016552 237 KDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWD-DMREGMVRG--WRGPVAAMDEEVLYGIDE-NSCTLSRYD 312 (387)
Q Consensus 237 p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~-~~~~~~~~~--~~~~~~~~~~~~ly~~~~-~~~~l~~yd 312 (387)
..++ ..++.-+|++|+.......+.++|+++++-. .++.....+ .....+++.+++||+.+. .++.|.++|
T Consensus 84 ~~p~-----~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 84 TSPR-----YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp SSEE-----EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEE
T ss_pred CCCc-----EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEE
Confidence 2121 2223368999998855678999999988643 222111000 012234557899999975 367899999
Q ss_pred CCCCceeEccccccccCceEEEEeCCeEEEEecCC----------CeEEEEeccCC
Q 016552 313 EVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG----------GGIVVVDVKAA 358 (387)
Q Consensus 313 ~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~----------~~i~~~d~~~~ 358 (387)
+++++....-...... ....+.-+|++|+...+. ..+.++|..+.
T Consensus 159 ~~t~~~~~~i~~g~~p-~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 159 TETDKVVDELTIGIQP-TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF 213 (328)
T ss_dssp TTTTEEEEEEECSSCB-CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT
T ss_pred CCCCeEEEEEEcCCCc-cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC
Confidence 9998765432221111 122334568988886543 68999999865
No 25
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.58 E-value=1.1e-08 Score=91.81 Aligned_cols=46 Identities=17% Similarity=0.302 Sum_probs=39.4
Q ss_pred CCCCCCCCCCChHHHHHHHhhhcC---ch-hhhhhhHhhhhhhcCCCCCc
Q 016552 36 GDDHQPLLPGLPDHIAHLCLSHVH---PS-ILHNVCHSWRRLIYSPSFPP 81 (387)
Q Consensus 36 ~~~~~~~~~~LPddl~~~iL~rLP---l~-~~r~VcK~W~~li~~~~f~~ 81 (387)
..+....+..||+||+++||++|| |. ++++|||+|+.|++++.|.+
T Consensus 44 ~~~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~ 93 (297)
T 2e31_A 44 EAEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWL 93 (297)
T ss_dssp ---CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHH
T ss_pred ccccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHH
Confidence 334456889999999999999999 88 99999999999999998843
No 26
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.48 E-value=2.9e-05 Score=67.78 Aligned_cols=151 Identities=22% Similarity=0.236 Sum_probs=104.3
Q ss_pred eEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEE
Q 016552 190 AAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYD 269 (387)
Q Consensus 190 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD 269 (387)
.....++.+|+..|... .+.+.++|+.+++ =...-+++...+. ...+..+++||+.....+.+.+||
T Consensus 25 GL~~~~~~LyestG~~g------~S~v~~vD~~tgk----v~~~~~l~~~~fg---eGi~~~~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETG------RSSVRKVDLETGR----ILQRAEVPPPYFG---AGIVAWRDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp EEEEETTEEEEEECCTT------SCEEEEEETTTCC----EEEEEECCTTCCE---EEEEEETTEEEEEESSSSEEEEEE
T ss_pred cEEEECCEEEEECCCCC------CceEEEEECCCCC----EEEEEeCCCCcce---eEEEEeCCEEEEEEeeCCEEEEEE
Confidence 45556889999988643 2478999999998 5544455544343 445677999999987778999999
Q ss_pred CCCCcee-ecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeE-c--ccccc-ccCceEEEEeCCeEEEEe
Q 016552 270 VVANTWD-DMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKE-V--VKSDL-LKGARHAAAGGGRVCAVC 344 (387)
Q Consensus 270 ~~~~~W~-~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~-v--~~~~~-~~~~~~~~~~~g~i~v~g 344 (387)
+++.+-. +++. .. .+-+++..+++||+-++ +++|..+|+++.+=.. + ...+. .....-+-..+|+||+-.
T Consensus 92 ~~tl~~~~ti~~-~~---~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanv 166 (243)
T 3mbr_X 92 LATLTPRARFRY-PG---EGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANV 166 (243)
T ss_dssp TTTTEEEEEEEC-SS---CCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CCcCcEEEEEeC-CC---CceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEE
Confidence 9886532 3332 12 34566667788999886 7889999999864332 2 12111 122233455699999776
Q ss_pred cCCCeEEEEeccCC
Q 016552 345 ENGGGIVVVDVKAA 358 (387)
Q Consensus 345 g~~~~i~~~d~~~~ 358 (387)
-..+.|.++|+.+.
T Consensus 167 w~s~~I~vIDp~tG 180 (243)
T 3mbr_X 167 WLTSRIARIDPASG 180 (243)
T ss_dssp TTTTEEEEECTTTC
T ss_pred CCCCeEEEEECCCC
Confidence 67889999999865
No 27
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.33 E-value=0.00015 Score=64.41 Aligned_cols=196 Identities=6% Similarity=-0.138 Sum_probs=118.2
Q ss_pred eEEEEEC-CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEE
Q 016552 140 VQLVSLS-GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 140 ~~~~~~~-~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~ 218 (387)
+.++..+ +.||+..|.. ..+.+.++|+.|++-..--+++........+..+++||+..-.+ +.+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~-----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~--------~~v~v 90 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY-----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK--------NIGFI 90 (266)
T ss_dssp EEEEECSTTEEEEEECST-----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC--------SEEEE
T ss_pred ccEEEeCCCeEEEECCCC-----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC--------CEEEE
Confidence 4555555 7899987732 23579999999998665333333223334566688999985432 37899
Q ss_pred EECCCCccccCeEEcCCCCCCCccccceEEEEEC-CEEEEEeeeCCeEEEEECCCCce-eeccccc-ccCCC-CcEEEEe
Q 016552 219 WDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWK-GKLCLVNVKGAEGAVYDVVANTW-DDMREGM-VRGWR-GPVAAMD 294 (387)
Q Consensus 219 yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~-g~lyv~gg~~~~i~~yD~~~~~W-~~~~~~~-~~~~~-~~~~~~~ 294 (387)
||..+.+ .+..++.+ . .... ....| +++|+..+ .+.+.++|+++.+= ..++... +.... -..+...
T Consensus 91 iD~~t~~------v~~~i~~g-~-~~g~-glt~Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 91 YDRRTLS------NIKNFTHQ-M-KDGW-GLATDGKILYGSDG-TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp EETTTTE------EEEEEECC-S-SSCC-EEEECSSSEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EECCCCc------EEEEEECC-C-CCeE-EEEECCCEEEEECC-CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE
Confidence 9998766 22222222 0 1112 23334 56888775 46999999988642 2333211 11111 1123344
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCc---eeEccccc-c--------ccCceEEEEe--CCeEEEEecCCCeEEEEeccCC
Q 016552 295 EEVLYGIDENSCTLSRYDEVMDD---WKEVVKSD-L--------LKGARHAAAG--GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~~~ly~~~~~~~~l~~yd~~~~~---W~~v~~~~-~--------~~~~~~~~~~--~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+++||+-...++.|.+.|+++++ |..+..+. . .....+++.. ++++||.|+..+.++++|+...
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 88999877667899999999874 33333211 0 0122444443 4679999888899999999865
No 28
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.32 E-value=0.00061 Score=59.39 Aligned_cols=196 Identities=11% Similarity=-0.064 Sum_probs=121.1
Q ss_pred cceEEEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEE
Q 016552 138 LPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVE 217 (387)
Q Consensus 138 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 217 (387)
+...+...++.||+-.|..+ .+.+.++|+.|++-..--+++..-.....+..+++||++.... +.+.
T Consensus 22 ftqGL~~~~~~LyestG~~g-----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~--------~~v~ 88 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETG-----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN--------HEGF 88 (243)
T ss_dssp CEEEEEEETTEEEEEECCTT-----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--------SEEE
T ss_pred ccccEEEECCEEEEECCCCC-----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC--------CEEE
Confidence 33567777899999888432 3578999999998766445554434455677799999985443 3889
Q ss_pred EEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCce-eecccc-cccCCCC-cEEEEe
Q 016552 218 KWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTW-DDMREG-MVRGWRG-PVAAMD 294 (387)
Q Consensus 218 ~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W-~~~~~~-~~~~~~~-~~~~~~ 294 (387)
+||..+-+ -... ++.+.. ....+.-+++||+..| ...+..+|+++.+= ..+... .+..... ..+...
T Consensus 89 v~D~~tl~----~~~t--i~~~~~---Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~ 158 (243)
T 3mbr_X 89 VYDLATLT----PRAR--FRYPGE---GWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV 158 (243)
T ss_dssp EEETTTTE----EEEE--EECSSC---CCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEECCcCc----EEEE--EeCCCC---ceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe
Confidence 99998877 3322 221111 1223333567888877 56899999998753 222211 1111111 123345
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCc---eeEcccccc-c------c--CceEEEEe--CCeEEEEecCCCeEEEEecc
Q 016552 295 EEVLYGIDENSCTLSRYDEVMDD---WKEVVKSDL-L------K--GARHAAAG--GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 295 ~~~ly~~~~~~~~l~~yd~~~~~---W~~v~~~~~-~------~--~~~~~~~~--~g~i~v~gg~~~~i~~~d~~ 356 (387)
+|+||+-...+..|.+.|+++++ |..+..+.+ . . ...+++.. ++++||.|..=..++...+.
T Consensus 159 ~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 159 NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 88999876667899999999875 444443311 1 1 12333332 57888887665777766665
No 29
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.27 E-value=0.00012 Score=64.41 Aligned_cols=193 Identities=7% Similarity=-0.161 Sum_probs=115.7
Q ss_pred eEEEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEE
Q 016552 140 VQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 140 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 219 (387)
..+...++.||+..|..+ .+.+.++|+.|++-..--+++..-.....+..+++||++...+ +.+.+|
T Consensus 46 qGL~~~~~~LyestG~~g-----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~--------~~v~v~ 112 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG-----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN--------GLGFVW 112 (262)
T ss_dssp EEEEEETTEEEEEEEETT-----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--------SEEEEE
T ss_pred ceEEEECCEEEEECCCCC-----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC--------CEEEEE
Confidence 455556889999988533 2468999999997665434443222344667789999985433 388999
Q ss_pred ECCCCccccCeE-EcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCce-eeccccc-ccCCCC-cEEEEeC
Q 016552 220 DLMNGEKNSRWE-KTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTW-DDMREGM-VRGWRG-PVAAMDE 295 (387)
Q Consensus 220 d~~~~~~~~~W~-~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W-~~~~~~~-~~~~~~-~~~~~~~ 295 (387)
|+.+.+ -. +++ .+ .. ....+.-++++|+..| .+.+..+|+++.+= ..++... ...... ..+...+
T Consensus 113 D~~t~~----~~~ti~-~~--~e---G~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~ 181 (262)
T 3nol_A 113 NIRNLR----QVRSFN-YD--GE---GWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVD 181 (262)
T ss_dssp ETTTCC----EEEEEE-CS--SC---CCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEET
T ss_pred ECccCc----EEEEEE-CC--CC---ceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEEC
Confidence 998887 33 222 21 11 1223333456887776 46899999998653 2333210 111111 1234458
Q ss_pred CeEEEEeCCCCeEEEEeCCCCce---eEcccccc-c-------cCceEEEEe--CCeEEEEecCCCeEEEEecc
Q 016552 296 EVLYGIDENSCTLSRYDEVMDDW---KEVVKSDL-L-------KGARHAAAG--GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 296 ~~ly~~~~~~~~l~~yd~~~~~W---~~v~~~~~-~-------~~~~~~~~~--~g~i~v~gg~~~~i~~~d~~ 356 (387)
|+||+-...++.|.+.|+++++= ..+..+.+ . ....+++.. ++++||.|..=..++...+.
T Consensus 182 G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 182 GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 89998776678999999999853 33432211 1 112333332 47788886665666666554
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.26 E-value=6.5e-05 Score=70.12 Aligned_cols=179 Identities=18% Similarity=0.130 Sum_probs=101.6
Q ss_pred EEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE-eCC-EEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 148 KLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 148 ~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
.+|+.++.+ ..+.+||..+++-...-... ......+. -++ .||+.++.+. .+.+||..+++
T Consensus 3 ~l~vs~~~d-------~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d~--------~i~v~d~~~~~ 65 (391)
T 1l0q_A 3 FAYIANSES-------DNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHSN--------DVSIIDTATNN 65 (391)
T ss_dssp EEEEEETTT-------TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGGT--------EEEEEETTTTE
T ss_pred EEEEEcCCC-------CEEEEEECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCCC--------eEEEEECCCCe
Confidence 466666532 36899999887654422211 11122222 244 5777775543 78999998887
Q ss_pred cccCeEEcCCCCCCCccccceEEEEE--CCE-EEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe--CCeEEE
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGW--KGK-LCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYG 300 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~-lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ly~ 300 (387)
-...-..+.. ...+.+ +|+ +|+.+.....+.+||+.+++-...-. .......+++. +..||+
T Consensus 66 ----~~~~~~~~~~------v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 66 ----VIATVPAGSS------PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK---TGKSPLGLALSPDGKKLYV 132 (391)
T ss_dssp ----EEEEEECSSS------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEE
T ss_pred ----EEEEEECCCC------ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe---CCCCcceEEECCCCCEEEE
Confidence 4433222221 222222 454 66665555789999999886533221 11112233332 345777
Q ss_pred EeCCCCeEEEEeCCCCceeEccccccccCceEEE-EeCC-eEEEEecCCCeEEEEeccCC
Q 016552 301 IDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAA-AGGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~g-~i~v~gg~~~~i~~~d~~~~ 358 (387)
.+..++.|.+||.++.+....... ......+. ..++ .|++.+..++.+.++|+.+.
T Consensus 133 ~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EeCCCCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 877788999999988765543322 11122222 2344 46677677788999999864
No 31
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.26 E-value=0.0001 Score=64.94 Aligned_cols=149 Identities=18% Similarity=0.135 Sum_probs=100.0
Q ss_pred EEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECC
Q 016552 192 GCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 192 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~ 271 (387)
...++.+|+..|... .+.+.++|+++++ =...-+++...+. ...+..+++||+.....+.+.+||++
T Consensus 49 ~~~~~~LyestG~~g------~S~v~~vD~~Tgk----v~~~~~l~~~~Fg---eGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 49 FYRNGYFYESTGLNG------RSSIRKVDIESGK----TLQQIELGKRYFG---EGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp EEETTEEEEEEEETT------EEEEEEECTTTCC----EEEEEECCTTCCE---EEEEEETTEEEEEESSSSEEEEEETT
T ss_pred EEECCEEEEECCCCC------CceEEEEECCCCc----EEEEEecCCccce---eEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 344889999988643 2478899999998 4443345543332 34566789999998777899999998
Q ss_pred CCcee-ecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeE-ccc--ccc-ccCceEEEEeCCeEEEEecC
Q 016552 272 ANTWD-DMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKE-VVK--SDL-LKGARHAAAGGGRVCAVCEN 346 (387)
Q Consensus 272 ~~~W~-~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~-v~~--~~~-~~~~~~~~~~~g~i~v~gg~ 346 (387)
+.+=. +++. .. .+-+++..+++||+.++ +++|+.+|+++.+=.. +.. ... ....--+...+|+||+-.-.
T Consensus 116 t~~~~~ti~~-~~---eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~ 190 (262)
T 3nol_A 116 NLRQVRSFNY-DG---EGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQ 190 (262)
T ss_dssp TCCEEEEEEC-SS---CCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred cCcEEEEEEC-CC---CceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEcc
Confidence 87543 3332 12 33456666778888876 6789999999864332 221 111 12111244558999977667
Q ss_pred CCeEEEEeccCC
Q 016552 347 GGGIVVVDVKAA 358 (387)
Q Consensus 347 ~~~i~~~d~~~~ 358 (387)
.+.|.++|+.+.
T Consensus 191 ~~~I~vIDp~tG 202 (262)
T 3nol_A 191 TNKIVRIDPETG 202 (262)
T ss_dssp SSEEEEECTTTC
T ss_pred CCeEEEEECCCC
Confidence 889999999865
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.25 E-value=0.0003 Score=61.89 Aligned_cols=185 Identities=13% Similarity=-0.017 Sum_probs=105.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.||+... . ..+++||+.++............ -...+. -++++|+..... ..+.+||..+.
T Consensus 77 ~g~l~v~~~-~-------~~i~~~d~~~~~~~~~~~~~~~~-p~~i~~~~~g~l~v~~~~~--------~~i~~~~~~~~ 139 (270)
T 1rwi_B 77 AGTVYVTDF-N-------NRVVTLAAGSNNQTVLPFDGLNY-PEGLAVDTQGAVYVADRGN--------NRVVKLAAGSK 139 (270)
T ss_dssp TCCEEEEET-T-------TEEEEECTTCSCCEECCCCSCSS-EEEEEECTTCCEEEEEGGG--------TEEEEECTTCC
T ss_pred CCCEEEEcC-C-------CEEEEEeCCCceEeeeecCCcCC-CcceEECCCCCEEEEECCC--------CEEEEEECCCc
Confidence 467887653 1 36899999887655543211111 122222 267899875432 26778877666
Q ss_pred ccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCC-cEEEEe-CCeEEEEe
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRG-PVAAMD-EEVLYGID 302 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~~-~~~ly~~~ 302 (387)
. .......... .. ...++.-+|++|+.......+.+||+....-..... ..... ..+++. +|.||+.+
T Consensus 140 ~----~~~~~~~~~~-~p--~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~---~~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 140 T----QTVLPFTGLN-DP--DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF---TDITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp S----CEECCCCSCC-SC--CCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC---SSCCSEEEEEECTTCCEEEEE
T ss_pred e----eEeeccccCC-Cc--eeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc---cCCCCceEEEECCCCCEEEEE
Confidence 5 4433211100 11 111222368899887655689999998765433221 11112 234443 45899988
Q ss_pred CCCCeEEEEeCCCCceeEccccccccCceEEEE-eCCeEEEEecCCCeEEEEeccCC
Q 016552 303 ENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
...+.|.+||+++..-..... ........++. -+|+||+....++.|.+|+....
T Consensus 210 ~~~~~v~~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 210 HNTNQVVKLLAGSTTSTVLPF-TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp TTTSCEEEECTTCSCCEECCC-CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCCcEEEEcCCCCcceeecc-CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 767789999998764332211 11222333333 35789998888889999998743
No 33
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.20 E-value=0.00051 Score=62.75 Aligned_cols=188 Identities=13% Similarity=-0.010 Sum_probs=100.6
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCC--------cceeEEE--eCCEEEEEecCCCCCCCCCcceE
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPR--------RWCAAGC--SRGAVYVASGIGSQFSSDVAKSV 216 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r--------~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v 216 (387)
+.+|+.+... ..+.++|+.+++-...-+.+... .....+. .++.+|+.+.... ..+
T Consensus 101 ~~l~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-------~~i 166 (353)
T 3vgz_A 101 QTLWFGNTVN-------SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE-------SVI 166 (353)
T ss_dssp TEEEEEETTT-------TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-------CEE
T ss_pred CEEEEEecCC-------CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-------ceE
Confidence 3477765521 36899999988653321221111 1112222 2346888763222 368
Q ss_pred EEEECCCCccccCeEEcCCCCCCCccccceEEEEECCE-EEEEeeeCCeEEEEECCCCceeecccccccCC--CCcEEEE
Q 016552 217 EKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGK-LCLVNVKGAEGAVYDVVANTWDDMREGMVRGW--RGPVAAM 293 (387)
Q Consensus 217 ~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~-lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~--~~~~~~~ 293 (387)
.+||..+.+ -...-+.... .. ...+..-+|+ +|+... ...+.+||+.+++-...-.....+. ....+++
T Consensus 167 ~~~d~~~~~----~~~~~~~~~~-~~--~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 167 WVVDGGNIK----LKTAIQNTGK-MS--TGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp EEEETTTTE----EEEEECCCCT-TC--CCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE
T ss_pred EEEcCCCCc----eEEEecCCCC-cc--ceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEE
Confidence 999998877 3322111111 11 0223333554 666544 4688999998875322211011111 1112333
Q ss_pred e--CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCe-EEEEecCCCeEEEEeccCC
Q 016552 294 D--EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~-i~v~gg~~~~i~~~d~~~~ 358 (387)
. ++.+|+.+...+.+.+||+++.+-......+.. ......-+|+ +|+....++.+.++|..+.
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 3 556888876678999999988765443332221 2223344554 7777667889999999854
No 34
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.00049 Score=63.36 Aligned_cols=191 Identities=14% Similarity=0.062 Sum_probs=111.2
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEe--C--CEEEEEecCCCCCCCCCcceEEEEEC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS--R--GAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~v~~yd~ 221 (387)
++..++.|+.+ ..+.+||..+.++..+..+........+... + +++++.|+.+. .+.+||.
T Consensus 22 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg--------~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG--------KVLIWKE 86 (379)
T ss_dssp SSSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEECC-------CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC--------EEEEEEc
Confidence 35566666643 2578899887777665444433222222222 2 67777777644 6889999
Q ss_pred CCCccccCeEEcCCCCCCCccccceEEEEE--C--CEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe---
Q 016552 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--- 294 (387)
Q Consensus 222 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~--g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--- 294 (387)
.+++ |..+..+...... ..++.+ + +.+.+.++.+..+.+||..+..-..............+++..
T Consensus 87 ~~~~----~~~~~~~~~~~~~---v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 87 ENGR----WSQIAVHAVHSAS---VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp ETTE----EEEEEEECCCSSC---EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred CCCc----eeEeeeecCCCcc---eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 9998 7766544322111 223333 3 567777777778999999876322111100111111223322
Q ss_pred -----------CCeEEEEeCCCCeEEEEeCCCCc--eeEccccccccCceEEEE--eC---CeEEEEecCCCeEEEEecc
Q 016552 295 -----------EEVLYGIDENSCTLSRYDEVMDD--WKEVVKSDLLKGARHAAA--GG---GRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 295 -----------~~~ly~~~~~~~~l~~yd~~~~~--W~~v~~~~~~~~~~~~~~--~~---g~i~v~gg~~~~i~~~d~~ 356 (387)
++.+++.++.++.|..||..+.. |..+..+.........+. .+ +++++.++..+.+.+||+.
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 46777777778899999986543 544444433333332333 34 6888888888889999998
Q ss_pred CC
Q 016552 357 AA 358 (387)
Q Consensus 357 ~~ 358 (387)
+.
T Consensus 240 ~~ 241 (379)
T 3jrp_A 240 NE 241 (379)
T ss_dssp ST
T ss_pred CC
Confidence 64
No 35
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.17 E-value=0.00049 Score=64.10 Aligned_cols=164 Identities=13% Similarity=0.085 Sum_probs=97.5
Q ss_pred ccEEEeccCC--ceeeCCCCCCCC--------cceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcC
Q 016552 165 RPLIFDPICR--TWTFGPELVTPR--------RWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG 234 (387)
Q Consensus 165 ~~~vyd~~t~--~W~~l~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~ 234 (387)
.++.+|+.++ .|+.-...+... .....+..++.||+.+. + ..+.++|..+++.. |..-.
T Consensus 199 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~--------g~l~~~d~~tG~~~--w~~~~ 267 (376)
T 3q7m_A 199 RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N--------GNLTALDLRSGQIM--WKREL 267 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T--------SCEEEEETTTCCEE--EEECC
T ss_pred EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C--------cEEEEEECCCCcEE--eeccC
Confidence 5888999876 576532222111 12334456788888642 1 25788999888755 87542
Q ss_pred CCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc--eeecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEe
Q 016552 235 ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT--WDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYD 312 (387)
Q Consensus 235 ~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~--W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd 312 (387)
. . ....+..++.+|+.... ..+.+||+.+++ |+.-.. . .....+.++.++.||+.. ..+.|+++|
T Consensus 268 ~--~------~~~~~~~~~~l~~~~~~-g~l~~~d~~tG~~~w~~~~~--~-~~~~~~~~~~~~~l~v~~-~~g~l~~~d 334 (376)
T 3q7m_A 268 G--S------VNDFIVDGNRIYLVDQN-DRVMALTIDGGVTLWTQSDL--L-HRLLTSPVLYNGNLVVGD-SEGYLHWIN 334 (376)
T ss_dssp C--C------EEEEEEETTEEEEEETT-CCEEEEETTTCCEEEEECTT--T-TSCCCCCEEETTEEEEEC-TTSEEEEEE
T ss_pred C--C------CCCceEECCEEEEEcCC-CeEEEEECCCCcEEEeeccc--C-CCcccCCEEECCEEEEEe-CCCeEEEEE
Confidence 1 1 13355668899987643 379999998874 865421 1 111223445688888765 367899999
Q ss_pred CCCCc--eeEccccccccCceEEEEeCCeEEEEecCCCeEEEEec
Q 016552 313 EVMDD--WKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 313 ~~~~~--W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~ 355 (387)
+++++ |+.-...... ....+..++.||+. ..++.++.||.
T Consensus 335 ~~tG~~~~~~~~~~~~~--~~~~~~~~~~l~v~-~~~G~l~~~~~ 376 (376)
T 3q7m_A 335 VEDGRFVAQQKVDSSGF--QTEPVAADGKLLIQ-AKDGTVYSITR 376 (376)
T ss_dssp TTTCCEEEEEECCTTCB--CSCCEEETTEEEEE-BTTSCEEEEEC
T ss_pred CCCCcEEEEEecCCCcc--eeCCEEECCEEEEE-eCCCEEEEEeC
Confidence 98875 5432111111 12234458888876 44556887763
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.17 E-value=9.8e-05 Score=68.90 Aligned_cols=179 Identities=16% Similarity=0.094 Sum_probs=99.5
Q ss_pred EEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEe-CC-EEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 148 KLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS-RG-AVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 148 ~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
.||+.++.+ ..+.+||..+++....-+.+. .....+.. ++ .||+.+..+ ..+.+||..+++
T Consensus 45 ~l~~~~~~d-------~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~--------~~v~v~d~~~~~ 107 (391)
T 1l0q_A 45 KVYVANAHS-------NDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS--------STLSVIDTTSNT 107 (391)
T ss_dssp EEEEEEGGG-------TEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTT--------TEEEEEETTTTE
T ss_pred EEEEECCCC-------CeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCC--------CEEEEEECCCCe
Confidence 466666533 368999998887654322222 21222222 33 567765432 378999999887
Q ss_pred cccCeEEcCCCCCCCccccceEEEE--ECCE-EEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe--CCeEEE
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVG--WKGK-LCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYG 300 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~--~~g~-lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ly~ 300 (387)
-...-..... ...+. -+|+ +|+.+.....+.+||+.+++....-. .+.....+++. ++.||+
T Consensus 108 ----~~~~~~~~~~------~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 108 ----VAGTVKTGKS------PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS---VGRSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp ----EEEEEECSSS------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---CCSSEEEEEECTTSSEEEE
T ss_pred ----EEEEEeCCCC------cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe---cCCCcceEEECCCCCEEEE
Confidence 4433222211 12222 2454 66776656789999998886543321 11111233332 446777
Q ss_pred EeCCCCeEEEEeCCCCceeEccccccccCceEE-EEeCCeEEEEec---CCCeEEEEeccCC
Q 016552 301 IDENSCTLSRYDEVMDDWKEVVKSDLLKGARHA-AAGGGRVCAVCE---NGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~g~i~v~gg---~~~~i~~~d~~~~ 358 (387)
.+..++.|.+||.++.+-...... ......+ ..-+|+.+++++ ....+.+||+.+.
T Consensus 175 ~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 175 ANFDSMSISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred EeCCCCEEEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 777778999999988754433221 1111222 233455444444 5688999998854
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.14 E-value=0.00025 Score=62.47 Aligned_cols=185 Identities=11% Similarity=0.002 Sum_probs=101.9
Q ss_pred CCEEEE-EecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLIL-LAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v-~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.+|+ .... ...+.+||+.+......+..........+..-++++||... + ..+.+||+...
T Consensus 34 ~g~l~v~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~--------~~i~~~d~~~~ 97 (270)
T 1rwi_B 34 AGNVYVTSEGM-------YGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-N--------NRVVTLAAGSN 97 (270)
T ss_dssp TCCEEEEECSS-------SCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-T--------TEEEEECTTCS
T ss_pred CCCEEEEccCC-------CCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-C--------CEEEEEeCCCc
Confidence 567888 4221 14688899887765554322111111112223578998864 2 26788998877
Q ss_pred ccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CCeEEEE
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEVLYGI 301 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~~ly~~ 301 (387)
. .......... . ...+.+ +|++|+.......+.+||..+........ .... ....+++. +|+||+.
T Consensus 98 ~----~~~~~~~~~~-~----p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-~~~~-~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 98 N----QTVLPFDGLN-Y----PEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-TGLN-DPDGVAVDNSGNVYVT 166 (270)
T ss_dssp C----CEECCCCSCS-S----EEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC-CSCC-SCCCEEECTTCCEEEE
T ss_pred e----EeeeecCCcC-C----CcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc-ccCC-CceeEEEeCCCCEEEE
Confidence 6 4443311101 1 222333 67899886555689999877665433221 0101 11234443 5789998
Q ss_pred eCCCCeEEEEeCCCCceeEccccccccCceEEEE-eCCeEEEEecCCCeEEEEeccCC
Q 016552 302 DENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 302 ~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+...+.|.+||+++..-..... ........++. -+|.||+....++.|.++|..+.
T Consensus 167 ~~~~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 167 DTDNNRVVKLEAESNNQVVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp EGGGTEEEEECTTTCCEEECCC-SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred ECCCCEEEEEecCCCceEeecc-cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 7666789999998775433221 11222333333 35689988777788999998754
No 38
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.12 E-value=0.00028 Score=62.17 Aligned_cols=148 Identities=9% Similarity=-0.011 Sum_probs=99.0
Q ss_pred eEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEE
Q 016552 190 AAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYD 269 (387)
Q Consensus 190 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD 269 (387)
.....++.||+..|... .+.++|+++++. ...- ++...+. ...+..+++||+.....+.+.+||
T Consensus 59 GL~~~~~~Ly~stG~~g--------~v~~iD~~Tgkv----~~~~-l~~~~Fg---eGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQG--------TLRQLSLESAQP----VWME-RLGNIFA---EGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEETTEEEEEETTTT--------EEEECCSSCSSC----SEEE-ECTTCCE---EEEEECSSCEEEEESSSCEEEEEE
T ss_pred eEEEECCEEEEEcCCCC--------EEEEEECCCCcE----EeEE-CCCCcce---eEEEEeCCEEEEEEccCCEEEEEE
Confidence 34455789999988754 388999999982 2222 4433232 335667889999987778999999
Q ss_pred CCCCcee-ecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeE-cc--cccc-ccCceEEEEeCCeEEEEe
Q 016552 270 VVANTWD-DMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKE-VV--KSDL-LKGARHAAAGGGRVCAVC 344 (387)
Q Consensus 270 ~~~~~W~-~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~-v~--~~~~-~~~~~~~~~~~g~i~v~g 344 (387)
+++.+=. +++. .+. +-+++..+++||+.++ +++|..+|+++.+=.. +. ..+. .....-+...+|+||+-.
T Consensus 123 ~~Tl~~~~ti~~-~~e---GwGLt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv 197 (268)
T 3nok_A 123 GMPPQRERTTRY-SGE---GWGLCYWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI 197 (268)
T ss_dssp TTTTEEEEEEEC-SSC---CCCEEEETTEEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CCcCcEEEEEeC-CCc---eeEEecCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE
Confidence 9987543 3333 233 3456667888999876 7899999999874332 21 1111 112223445699999766
Q ss_pred cCCCeEEEEeccCC
Q 016552 345 ENGGGIVVVDVKAA 358 (387)
Q Consensus 345 g~~~~i~~~d~~~~ 358 (387)
-..+.|.++|+.+.
T Consensus 198 w~s~~I~vIDp~TG 211 (268)
T 3nok_A 198 WHSSDVLEIDPATG 211 (268)
T ss_dssp TTCSEEEEECTTTC
T ss_pred CCCCeEEEEeCCCC
Confidence 66789999999865
No 39
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.11 E-value=0.00068 Score=59.73 Aligned_cols=191 Identities=12% Similarity=-0.005 Sum_probs=113.9
Q ss_pred cceEEEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEE
Q 016552 138 LPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVE 217 (387)
Q Consensus 138 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 217 (387)
+...+...++.||+..|..+ .+.++|+.|++-..-- ++..-.....+..+++||++...+ +.+.
T Consensus 56 ftqGL~~~~~~Ly~stG~~g-------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~--------~~v~ 119 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG-------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE--------GLLF 119 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT-------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS--------CEEE
T ss_pred ccceEEEECCEEEEEcCCCC-------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC--------CEEE
Confidence 33466667899999988533 3889999998754432 443222334666788999985433 3889
Q ss_pred EEECCCCccccCeE-EcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCcee-ecccc-cccCCC-CcEEEE
Q 016552 218 KWDLMNGEKNSRWE-KTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWD-DMREG-MVRGWR-GPVAAM 293 (387)
Q Consensus 218 ~yd~~~~~~~~~W~-~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~-~~~~~-~~~~~~-~~~~~~ 293 (387)
+||+.+.+ -. +++--+.+ ...+.-+++||+..| ...+..+|+++.+=. .+... .+.... -..+..
T Consensus 120 V~D~~Tl~----~~~ti~~~~eG------wGLt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 120 TWSGMPPQ----RERTTRYSGEG------WGLCYWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC 188 (268)
T ss_dssp EEETTTTE----EEEEEECSSCC------CCEEEETTEEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred EEECCcCc----EEEEEeCCCce------eEEecCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE
Confidence 99998877 33 22211111 223444677888876 568999999987532 22210 111111 112334
Q ss_pred eCCeEEEEeCCCCeEEEEeCCCCc---eeEccccc-cc------c--CceEEEEe--CCeEEEEecCCCeEEEEec
Q 016552 294 DEEVLYGIDENSCTLSRYDEVMDD---WKEVVKSD-LL------K--GARHAAAG--GGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 294 ~~~~ly~~~~~~~~l~~yd~~~~~---W~~v~~~~-~~------~--~~~~~~~~--~g~i~v~gg~~~~i~~~d~ 355 (387)
.+|+||+-...++.|.+.|+++++ |..+..+. .. . ...+++.. ++++||.|..=..++...+
T Consensus 189 ~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 189 ANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp ETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred eCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 588999876667899999999985 44444221 11 1 12333332 4778888665566655543
No 40
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.10 E-value=0.00048 Score=61.15 Aligned_cols=152 Identities=19% Similarity=0.151 Sum_probs=98.1
Q ss_pred eEEEeC-CEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEE
Q 016552 190 AAGCSR-GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVY 268 (387)
Q Consensus 190 ~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~y 268 (387)
..+..+ +.+|+..|... .+.+.++|+.+++ =...-+++...+. ...+..++++|+.....+.+.+|
T Consensus 25 Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~----v~~~i~l~~~~fg---eGi~~~g~~lyv~t~~~~~v~vi 91 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLYG------RSSVRQVALQTGK----VENIHKMDDSYFG---EGLTLLNEKLYQVVWLKNIGFIY 91 (266)
T ss_dssp EEEECSTTEEEEEECSTT------TCEEEEEETTTCC----EEEEEECCTTCCE---EEEEEETTEEEEEETTCSEEEEE
T ss_pred cEEEeCCCeEEEECCCCC------CCEEEEEECCCCC----EEEEEecCCCcce---EEEEEeCCEEEEEEecCCEEEEE
Confidence 334444 79999877422 2488999999998 4433334332232 34555688999998777899999
Q ss_pred ECCCCce-eecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeE-cc--ccc-cccCceEEEEeCCeEEEE
Q 016552 269 DVVANTW-DDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKE-VV--KSD-LLKGARHAAAGGGRVCAV 343 (387)
Q Consensus 269 D~~~~~W-~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~-v~--~~~-~~~~~~~~~~~~g~i~v~ 343 (387)
|+++.+= .+++.+.+. +..++..+++||+..+ ++.|..+|+++.+=.. +. ..+ +......+...+|+||+-
T Consensus 92 D~~t~~v~~~i~~g~~~---g~glt~Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn 167 (266)
T 2iwa_A 92 DRRTLSNIKNFTHQMKD---GWGLATDGKILYGSDG-TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWAN 167 (266)
T ss_dssp ETTTTEEEEEEECCSSS---CCEEEECSSSEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred ECCCCcEEEEEECCCCC---eEEEEECCCEEEEECC-CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEe
Confidence 9987642 233321122 3456666778998774 7799999998864322 22 111 122233444458999988
Q ss_pred ecCCCeEEEEeccCC
Q 016552 344 CENGGGIVVVDVKAA 358 (387)
Q Consensus 344 gg~~~~i~~~d~~~~ 358 (387)
....+.|.++|+.+.
T Consensus 168 ~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 168 IWQTDCIARISAKDG 182 (266)
T ss_dssp ETTSSEEEEEETTTC
T ss_pred cCCCCeEEEEECCCC
Confidence 777889999999864
No 41
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.04 E-value=0.00085 Score=62.41 Aligned_cols=197 Identities=10% Similarity=0.072 Sum_probs=111.2
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccEEEeccCC--ceeeCCCCC-------CCCcceeEEEeCCEEEEEecCCCCCCCC
Q 016552 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELV-------TPRRWCAAGCSRGAVYVASGIGSQFSSD 211 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~--~W~~l~~~p-------~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 211 (387)
..++.++.||+.... ..++.||+.|+ .|+.-.+.. ........+..+++||+....
T Consensus 48 ~p~v~~~~v~~~~~~--------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~------- 112 (376)
T 3q7m_A 48 HPALADNVVYAADRA--------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK------- 112 (376)
T ss_dssp CCEEETTEEEEECTT--------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------
T ss_pred ccEEECCEEEEEcCC--------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------
Confidence 456678899987531 26899999876 576532211 112234455678899985421
Q ss_pred CcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc--eeecccccccCC-CC
Q 016552 212 VAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT--WDDMREGMVRGW-RG 288 (387)
Q Consensus 212 ~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~--W~~~~~~~~~~~-~~ 288 (387)
..+.++|..+++.. |+.-..-. .. ...+..++.+|+.... ..+.+||+++++ |+.-........ ..
T Consensus 113 --g~l~a~d~~tG~~~--W~~~~~~~--~~----~~p~~~~~~v~v~~~~-g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 113 --AQVYALNTSDGTVA--WQTKVAGE--AL----SRPVVSDGLVLIHTSN-GQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp --SEEEEEETTTCCEE--EEEECSSC--CC----SCCEEETTEEEEECTT-SEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred --CEEEEEECCCCCEE--EEEeCCCc--eE----cCCEEECCEEEEEcCC-CeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 36889999988755 87543211 11 2234568888876543 479999998774 875432111111 11
Q ss_pred cEEEEeCCeEEEEeCCCCeEEEEeCCCC--ceeEcccccccc--------CceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 289 PVAAMDEEVLYGIDENSCTLSRYDEVMD--DWKEVVKSDLLK--------GARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 289 ~~~~~~~~~ly~~~~~~~~l~~yd~~~~--~W~~v~~~~~~~--------~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.+.++.++.+|+ +...+.+++||++++ .|+.-...+... .....+..++.+|+. ..+..++.+|..++
T Consensus 182 ~~~~~~~~~v~~-g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~-~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 182 SAPTTAFGAAVV-GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFAL-AYNGNLTALDLRSG 259 (376)
T ss_dssp CCCEEETTEEEE-CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEE-CTTSCEEEEETTTC
T ss_pred CCcEEECCEEEE-EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEE-ecCcEEEEEECCCC
Confidence 334455777766 444678999999866 476532211100 112223346666665 34456777777533
Q ss_pred CCCCceEEe
Q 016552 359 AAPTIFVVD 367 (387)
Q Consensus 359 ~~~~~W~~~ 367 (387)
...|...
T Consensus 260 --~~~w~~~ 266 (376)
T 3q7m_A 260 --QIMWKRE 266 (376)
T ss_dssp --CEEEEEC
T ss_pred --cEEeecc
Confidence 1346653
No 42
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.02 E-value=0.0023 Score=56.75 Aligned_cols=181 Identities=8% Similarity=0.012 Sum_probs=102.1
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCC-CCcceeEEEe-CCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVT-PRRWCAAGCS-RGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+|+.... ...+++||+. ++.+... ++. .......+.. ++++|+..... ..+.+||+ +
T Consensus 67 ~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~d~-~ 128 (299)
T 2z2n_A 67 DGEVWFTENA-------ANKIGRITKK-GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMNG--------NRIGRITD-D 128 (299)
T ss_dssp TSCEEEEETT-------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTT--------TEEEEECT-T
T ss_pred CCCEEEeCCC-------CCeEEEECCC-CcEEEEe-CCCcCCCceeeEECCCCCEEEEecCC--------ceEEEECC-C
Confidence 5677776432 1357888886 4444432 121 1112222222 57899875432 26788898 6
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc-EEEEe-CCeEE
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD-EEVLY 299 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~-~~~ly 299 (387)
++ ..... .+.... ....... +|.+|+.......+..||+ +++...... +.....+ .+++. +|.||
T Consensus 129 g~----~~~~~-~~~~~~---~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~--~~~~~~~~~i~~~~~g~l~ 197 (299)
T 2z2n_A 129 GK----IREYE-LPNKGS---YPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKI--PTPASGPVGITKGNDDALW 197 (299)
T ss_dssp CC----EEEEE-CSSTTC---CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC--SSTTCCEEEEEECTTSSEE
T ss_pred CC----EEEec-CCCCCC---CCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeC--CCCCCcceeEEECCCCCEE
Confidence 55 55433 111111 1223333 5789987654468999999 777665421 1111122 34443 57899
Q ss_pred EEeCCCCeEEEEeCCCCceeEccccccccCceEEEE-eCCeEEEEecCCCeEEEEecc
Q 016552 300 GIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 300 ~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~g~i~v~gg~~~~i~~~d~~ 356 (387)
+.+...+.|..||+ ++....+...........++. -+|+||+....++.+..+|+.
T Consensus 198 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 198 FVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred EEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 98766778999999 776665432212222333333 357888876667889999984
No 43
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.02 E-value=0.0013 Score=58.40 Aligned_cols=188 Identities=11% Similarity=0.005 Sum_probs=103.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++.+|+..... ...+.+||+..+.-..+...........+..-++++||..... ..+.+||+....
T Consensus 88 ~g~l~v~~~~~------~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~~~~g~~ 153 (286)
T 1q7f_A 88 SGDIIVTERSP------THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKV--------MRVIIFDQNGNV 153 (286)
T ss_dssp TTEEEEEECGG------GCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTT--------TEEEEECTTSCE
T ss_pred CCeEEEEcCCC------CCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCC--------CEEEEEcCCCCE
Confidence 67888876321 1368889965554444322111111112222367899875432 367889876554
Q ss_pred cccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCC-cEEEE-eCCeEEEE
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRG-PVAAM-DEEVLYGI 301 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~-~~~~ly~~ 301 (387)
...+........ ...+.+ +|++|+.+.....+.+||+....-..+... . .... ..+++ .+|.||+.
T Consensus 154 ----~~~~~~~~~~~~----p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~-g-~~~~p~~i~~d~~G~l~v~ 223 (286)
T 1q7f_A 154 ----LHKFGCSKHLEF----PNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGE-G-ITNYPIGVGINSNGEILIA 223 (286)
T ss_dssp ----EEEEECTTTCSS----EEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCT-T-TSCSEEEEEECTTCCEEEE
T ss_pred ----EEEeCCCCccCC----cEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccC-C-ccCCCcEEEECCCCCEEEE
Confidence 333321111101 223333 588998876567899999876544443321 0 0112 23444 36789998
Q ss_pred eCCCC-eEEEEeCCCCceeEccccccccCceE-EEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 302 DENSC-TLSRYDEVMDDWKEVVKSDLLKGARH-AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 302 ~~~~~-~l~~yd~~~~~W~~v~~~~~~~~~~~-~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+...+ .|.+||++...-..+........... ++.-+|++|+.. .+..|.+|+....
T Consensus 224 ~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~-~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 224 DNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLAS-KDYRLYIYRYVQL 281 (286)
T ss_dssp ECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE-TTTEEEEEECSCC
T ss_pred eCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEEC-CCCeEEEEEcccc
Confidence 86665 89999987654444432211112222 333478888884 5678999988743
No 44
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.01 E-value=0.00045 Score=65.31 Aligned_cols=187 Identities=12% Similarity=-0.011 Sum_probs=102.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCC---CCCcceeEE--EeCCEEEEEecCCCCCCCCCcceEEEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV---TPRRWCAAG--CSRGAVYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p---~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~v~~yd 220 (387)
++.+++.++.+ ..+.+||+.+++.....+.. ......... ..++++|+.++.+. .+.+||
T Consensus 133 ~~~~~~~~~~~-------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~--------~v~~~d 197 (433)
T 3bws_A 133 NTRLAIPLLED-------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQAN--------AVHVFD 197 (433)
T ss_dssp SSEEEEEBTTS-------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT--------EEEEEE
T ss_pred CCeEEEEeCCC-------CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCC--------EEEEEE
Confidence 56777776532 35899999988776543321 222112222 23678888877543 789999
Q ss_pred CCCCccccCeEEcCCCCCCCccccceEEEEECC-EEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CC-e
Q 016552 221 LMNGEKNSRWEKTGELKDGRFSREAIDAVGWKG-KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE-V 297 (387)
Q Consensus 221 ~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g-~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~-~ 297 (387)
..+.+ -...-..... .. ...+..-++ .+|+.+..+..+.+||+.+++....-. .......+++. ++ .
T Consensus 198 ~~~~~----~~~~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~ 267 (433)
T 3bws_A 198 LKTLA----YKATVDLTGK-WS--KILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD---KIGLPRGLLLSKDGKE 267 (433)
T ss_dssp TTTCC----EEEEEECSSS-SE--EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC---CCSEEEEEEECTTSSE
T ss_pred CCCce----EEEEEcCCCC-Ce--eEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec---CCCCceEEEEcCCCCE
Confidence 98876 3322111111 10 011222244 466665555789999998876533211 11111223332 34 5
Q ss_pred EEEEeC-------CCCeEEEEeCCCCceeEccccccccCceEEEEeCC-eEEEEecCCCeEEEEeccCC
Q 016552 298 LYGIDE-------NSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 298 ly~~~~-------~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g-~i~v~gg~~~~i~~~d~~~~ 358 (387)
|++.+. .++.|.+||+.+.+-......+... ......-++ .+++.+...+.+.+||+.+.
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK-RHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE-EEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc-ceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 555442 2568999999887544332211111 112222344 57788777889999999854
No 45
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.99 E-value=0.0012 Score=62.81 Aligned_cols=191 Identities=13% Similarity=0.071 Sum_probs=111.8
Q ss_pred eEEEEECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEE
Q 016552 140 VQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 140 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 219 (387)
..++..++.+++.|+.++ .+.+||..+++-.. .+........+...++..++.|+.+. .+.+|
T Consensus 176 v~~l~~~~~~l~sg~~dg-------~i~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~l~s~s~dg--------~i~vw 238 (435)
T 1p22_A 176 VLCLQYDERVIITGSSDS-------TVRVWDVNTGEMLN--TLIHHCEAVLHLRFNNGMMVTCSKDR--------SIAVW 238 (435)
T ss_dssp EEEEECCSSEEEEEETTS-------CEEEEESSSCCEEE--EECCCCSCEEEEECCTTEEEEEETTS--------CEEEE
T ss_pred EEEEEECCCEEEEEcCCC-------eEEEEECCCCcEEE--EEcCCCCcEEEEEEcCCEEEEeeCCC--------cEEEE
Confidence 344555777888877543 58899998875432 12222222233334556667776544 77889
Q ss_pred ECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEeCCeEE
Q 016552 220 DLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLY 299 (387)
Q Consensus 220 d~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly 299 (387)
|..+... ......+.... ....++..++...+.++.+..+.+||..+.+-...-... .....++.. ++.++
T Consensus 239 d~~~~~~---~~~~~~~~~~~---~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~v~~~~~-~~~~l 309 (435)
T 1p22_A 239 DMASPTD---ITLRRVLVGHR---AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--KRGIACLQY-RDRLV 309 (435)
T ss_dssp ECSSSSC---CEEEEEECCCS---SCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEE-ETTEE
T ss_pred eCCCCCC---ceeeeEecCCC---CcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCC--CCcEEEEEe-CCCEE
Confidence 9887651 11101111110 113344557777777777778999999886432211101 111123334 45666
Q ss_pred EEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 300 GIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 300 ~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+.++.++.|..||.++.. .+...........++..+++.++.|+.++.|.+||+.+.
T Consensus 310 ~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 310 VSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp EEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHH
T ss_pred EEEeCCCeEEEEECCCCC--EEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCC
Confidence 777778899999998763 222333333445556668888888888889999998743
No 46
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.99 E-value=0.0014 Score=62.43 Aligned_cols=174 Identities=14% Similarity=0.147 Sum_probs=91.4
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcccc
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSRE 244 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~ 244 (387)
.+.+||..+.+-.. .+........+...++..++.|+.+. .+.+||..+.+ -...-.....
T Consensus 260 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d~--------~i~i~d~~~~~----~~~~~~~~~~----- 320 (445)
T 2ovr_B 260 MVKVWDPETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLDT--------SIRVWDVETGN----CIHTLTGHQS----- 320 (445)
T ss_dssp CEEEEEGGGTEEEE--EECCCSSCEEEEEECSSEEEEEETTS--------CEEEEETTTCC----EEEEECCCCS-----
T ss_pred EEEEEECCCCcEeE--EecCCCCceEEEEECCCEEEEEeCCC--------eEEEEECCCCC----EEEEEcCCcc-----
Confidence 45666666553221 11111112222333666666666544 67889998876 3221111111
Q ss_pred ceEEEEECCEEEEEeeeCCeEEEEECCCCceee-cccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEcc-
Q 016552 245 AIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVV- 322 (387)
Q Consensus 245 ~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~- 322 (387)
...+...++.+.+.++.+..+.+||..+++-.. +...........+++. ++.+++.++.++.|.+||.++++....-
T Consensus 321 ~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 399 (445)
T 2ovr_B 321 LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLKTGEFIRNLV 399 (445)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE-CSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE-CCCEEEEEeCCCeEEEEECCCCceeeeee
Confidence 133444566666777766789999998765321 1110001111223334 5566777777899999999988654322
Q ss_pred cc--ccccCce-EEEE-eCCeEEEEecCCC----eEEEEeccCC
Q 016552 323 KS--DLLKGAR-HAAA-GGGRVCAVCENGG----GIVVVDVKAA 358 (387)
Q Consensus 323 ~~--~~~~~~~-~~~~-~~g~i~v~gg~~~----~i~~~d~~~~ 358 (387)
.. ....... .+.. -++.++++|+.++ .+.++|.+..
T Consensus 400 ~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 400 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp ECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred ccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 11 1122222 2222 3455556665444 4999999854
No 47
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.97 E-value=0.0033 Score=55.39 Aligned_cols=184 Identities=7% Similarity=-0.086 Sum_probs=106.7
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEe--CCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS--RGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.||+.-.. ...++++|+.+..-..+.+...... ...+.. +++||+.-.. ...+.++|+..
T Consensus 47 ~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~p-~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~g 110 (267)
T 1npe_A 47 DKVVYWTDIS-------EPSIGRASLHGGEPTTIIRQDLGSP-EGIALDHLGRTIFWTDSQ--------LDRIEVAKMDG 110 (267)
T ss_dssp TTEEEEEETT-------TTEEEEEESSSCCCEEEECTTCCCE-EEEEEETTTTEEEEEETT--------TTEEEEEETTS
T ss_pred CCEEEEEECC-------CCEEEEEecCCCCcEEEEECCCCCc-cEEEEEecCCeEEEEECC--------CCEEEEEEcCC
Confidence 5688887532 2468999998765433221111111 222332 5799998532 23788898875
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeee--CCeEEEEECCCCceeecccccccCCCC-cEEEEe--CC
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVK--GAEGAVYDVVANTWDDMREGMVRGWRG-PVAAMD--EE 296 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~--~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~~--~~ 296 (387)
.. -..+...... .+ ...++- ++.||+.... ...+.++++....-+.+.. ..... ..+++. ++
T Consensus 111 ~~----~~~~~~~~~~-~P---~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~---~~~~~P~gia~d~~~~ 179 (267)
T 1npe_A 111 TQ----RRVLFDTGLV-NP---RGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ---DNLGLPNGLTFDAFSS 179 (267)
T ss_dssp CS----CEEEECSSCS-SE---EEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC---TTCSCEEEEEEETTTT
T ss_pred CC----EEEEEECCCC-Cc---cEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE---CCCCCCcEEEEcCCCC
Confidence 54 3333211101 11 222222 6889998754 3578899887543332221 11112 234443 57
Q ss_pred eEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 297 VLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 297 ~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+||+.+...+.|.++|+++..-..+.. ....+..++.-++.||+....++.|.++|..+.
T Consensus 180 ~lyv~d~~~~~I~~~~~~g~~~~~~~~--~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 180 QLCWVDAGTHRAECLNPAQPGRRKVLE--GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp EEEEEETTTTEEEEEETTEEEEEEEEE--CCCSEEEEEEETTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEECCCCEEEEEecCCCceEEEec--CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCC
Confidence 899998878899999998653222221 223345556668899998777889999999854
No 48
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.95 E-value=0.0013 Score=58.41 Aligned_cols=189 Identities=11% Similarity=0.087 Sum_probs=104.7
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCC---CC-CcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV---TP-RRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p---~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~y 219 (387)
++.+|+..... ..+.+||+..+....++... .. ..-...+. .++++||.+.... ..+.+|
T Consensus 40 ~g~l~v~~~~~-------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~-------~~i~~~ 105 (286)
T 1q7f_A 40 QNDIIVADTNN-------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT-------HQIQIY 105 (286)
T ss_dssp TCCEEEEEGGG-------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG-------CEEEEE
T ss_pred CCCEEEEECCC-------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC-------CEEEEE
Confidence 46788875432 35889998866544443211 11 11122333 3679999864211 367889
Q ss_pred ECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc-EEEEe-CCe
Q 016552 220 DLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD-EEV 297 (387)
Q Consensus 220 d~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~-~~~ 297 (387)
|..... -..+...... .. ...++.-+|++|+.+.....+.+||+.......+.. ......+ .+++. +|+
T Consensus 106 d~~g~~----~~~~~~~~~~-~~--~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~--~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 106 NQYGQF----VRKFGATILQ-HP--RGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGC--SKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp CTTSCE----EEEECTTTCS-CE--EEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEEC--TTTCSSEEEEEECSSSE
T ss_pred CCCCcE----EEEecCccCC-Cc--eEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCC--CCccCCcEEEEECCCCC
Confidence 854443 3333211101 11 011222368899886655689999987654444321 1111122 33433 578
Q ss_pred EEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEE-eCCeEEEEecCCC-eEEEEeccC
Q 016552 298 LYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGG-GIVVVDVKA 357 (387)
Q Consensus 298 ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~g~i~v~gg~~~-~i~~~d~~~ 357 (387)
+|+.+...+.|.+||++...-..+...........++. -+|+||+....++ .|.+||...
T Consensus 177 l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 177 IFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp EEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred EEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 99987667899999997765444433211222333333 4688998876665 899999764
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.90 E-value=0.0024 Score=58.54 Aligned_cols=190 Identities=14% Similarity=0.146 Sum_probs=106.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcc-eeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRW-CAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+++.|+.+ ..+.+||..++++..+..+...... ...+ .-++++++.|+.+. .+.+||..+
T Consensus 19 ~~~~l~~~~~d-------~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg--------~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN-------HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR--------NAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS-------SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS--------CEEEEEEET
T ss_pred CCCEEEEEeCC-------CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC--------eEEEEECCC
Confidence 45666666532 3689999999877665554432222 2222 22566777776543 678899988
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCc-eeecccccccCCC--CcEEEEe-CCe
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANT-WDDMREGMVRGWR--GPVAAMD-EEV 297 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~~~~~~--~~~~~~~-~~~ 297 (387)
.+ +.....+..... ...++.+ ++++++.++.+..+.+||..+.. |..... ...+.. ..+++.. ++.
T Consensus 84 ~~----~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 84 RT----WKPTLVILRINR---AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH-IKKPIRSTVLSLDWHPNSV 155 (372)
T ss_dssp TE----EEEEEECCCCSS---CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE-ECTTCCSCEEEEEECTTSS
T ss_pred Ce----eeeeEEeecCCC---ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee-eecccCCCeeEEEEcCCCC
Confidence 87 765443221111 1223332 56666777666778888887654 332221 111111 2233332 556
Q ss_pred EEEEeCCCCeEEEEeCCCC----------------ceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccCC
Q 016552 298 LYGIDENSCTLSRYDEVMD----------------DWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 298 ly~~~~~~~~l~~yd~~~~----------------~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+++.++.++.+..||.... .-..+............+. .+++.++.++..+.+.+||+.+.
T Consensus 156 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 156 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 7777777889999996421 1112222222222222333 36778888788888999999854
No 50
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.87 E-value=0.0046 Score=54.81 Aligned_cols=182 Identities=8% Similarity=-0.025 Sum_probs=102.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.+|+.... ...+++||+. +++...............+. -++++|+..... ..+..||+. +
T Consensus 72 ~g~l~v~~~~-------~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~~~~-g 134 (300)
T 2qc5_A 72 LGDIWFTENG-------ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG--------DRIGKLTAD-G 134 (300)
T ss_dssp TSCEEEEETT-------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTT--------TEEEEECTT-S
T ss_pred CCCEEEEecC-------CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCC--------CeEEEECCC-C
Confidence 4678876431 1358899988 66654321111111222222 267899875322 267888887 5
Q ss_pred ccccCeEEcCCCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc-EEEEe-CCeEEE
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD-EEVLYG 300 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~-~~~ly~ 300 (387)
+ ..... ++.... ...... -+|++|+.......+.+||+ +++...... +.....+ .+++. +|.||+
T Consensus 135 ~----~~~~~-~~~~~~---~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~--~~~~~~~~~i~~d~~g~l~v 203 (300)
T 2qc5_A 135 T----IYEYD-LPNKGS---YPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPL--PTNAAAPVGITSGNDGALWF 203 (300)
T ss_dssp C----EEEEE-CSSTTC---CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC--SSTTCCEEEEEECTTSSEEE
T ss_pred C----EEEcc-CCCCCC---CceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeC--CCCCCCcceEEECCCCCEEE
Confidence 5 55432 221111 122333 35789987654568999999 666655432 1111222 33343 578999
Q ss_pred EeCCCCeEEEEeCCCCceeEccccccccCceEEEE-eCCeEEEEecCCCeEEEEecc
Q 016552 301 IDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~g~i~v~gg~~~~i~~~d~~ 356 (387)
.....+.|.+||+ ++....+...........++. -+|+||+....++.|..+|+.
T Consensus 204 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 204 VEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 8766678999999 555555432212222333333 357888887667889999985
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.0018 Score=59.51 Aligned_cols=194 Identities=8% Similarity=0.012 Sum_probs=106.8
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEe--C--CEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS--R--GAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
+.+++.|+.+ ..+.+||..+++|..+..+............ + +.+++.|+.+. .+.+||..
T Consensus 69 ~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~--------~i~v~d~~ 133 (379)
T 3jrp_A 69 GTILASCSYD-------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG--------KVSVVEFK 133 (379)
T ss_dssp CSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS--------EEEEEECC
T ss_pred CCEEEEeccC-------CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC--------cEEEEecC
Confidence 5666666643 2589999999988765554433222222222 3 56777776544 78889988
Q ss_pred CCccccCeEEcCCCCCCCccccceEEEEE---------------CCEEEEEeeeCCeEEEEECCCCc--eeecccccccC
Q 016552 223 NGEKNSRWEKTGELKDGRFSREAIDAVGW---------------KGKLCLVNVKGAEGAVYDVVANT--WDDMREGMVRG 285 (387)
Q Consensus 223 ~~~~~~~W~~~~~~p~~~~~~~~~~~~~~---------------~g~lyv~gg~~~~i~~yD~~~~~--W~~~~~~~~~~ 285 (387)
+..... -..+...... ..++.. ++.+++.++.+..+.+||..++. |..+.......
T Consensus 134 ~~~~~~-~~~~~~~~~~------v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~ 206 (379)
T 3jrp_A 134 ENGTTS-PIIIDAHAIG------VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 206 (379)
T ss_dssp TTSCCC-EEEEECCTTC------EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred CCCcee-eEEecCCCCc------eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc
Confidence 774100 0111111101 112222 46777777777789999986553 44332211111
Q ss_pred CCCcEEEEe-C---CeEEEEeCCCCeEEEEeCCCCceeEc---cccccccCceE--EEEeCCeEEEEecCCCeEEEEecc
Q 016552 286 WRGPVAAMD-E---EVLYGIDENSCTLSRYDEVMDDWKEV---VKSDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 286 ~~~~~~~~~-~---~~ly~~~~~~~~l~~yd~~~~~W~~v---~~~~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~ 356 (387)
....+++.. + +.+++.++.++.+..||..+...... ........... ....+++.+++++.++.+.+||+.
T Consensus 207 ~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 207 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 112233333 3 57777777788999999887632111 11111222222 233467777787778889999988
Q ss_pred CCCCCCceE
Q 016552 357 AAAAPTIFV 365 (387)
Q Consensus 357 ~~~~~~~W~ 365 (387)
.. ..|.
T Consensus 287 ~~---~~~~ 292 (379)
T 3jrp_A 287 LE---GKWE 292 (379)
T ss_dssp ET---TEEE
T ss_pred CC---Cccc
Confidence 43 3676
No 52
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.85 E-value=0.0022 Score=56.89 Aligned_cols=183 Identities=8% Similarity=-0.038 Sum_probs=101.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.||+.... ...++++|+ +++................+. -++++|+.... ...+.+||+ ++
T Consensus 109 ~g~l~v~~~~-------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~-~g 171 (299)
T 2z2n_A 109 NGDIWFTEMN-------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ--------NNAIGRITE-SG 171 (299)
T ss_dssp TSCEEEEETT-------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT--------TTEEEEECT-TC
T ss_pred CCCEEEEecC-------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC--------CCEEEEEcC-CC
Confidence 4678876532 135788998 666554321111111122222 25689886432 136788999 77
Q ss_pred ccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc-EEEEe-CCeEEE
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD-EEVLYG 300 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~-~~~ly~ 300 (387)
+ ..... .+.... ......+ +|.+|+.......+.+||+ +++...... +.....+ .+++. +|.||+
T Consensus 172 ~----~~~~~-~~~~~~---~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~--~~~~~~~~~i~~~~~g~l~v 240 (299)
T 2z2n_A 172 D----ITEFK-IPTPAS---GPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKI--PTPNARPHAITAGAGIDLWF 240 (299)
T ss_dssp C----EEEEE-CSSTTC---CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC--SSTTCCEEEEEECSTTCEEE
T ss_pred c----EEEee-CCCCCC---cceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEEC--CCCCCCceeEEECCCCCEEE
Confidence 6 66542 111111 1223333 5789987654568999999 777665422 1111122 33343 568998
Q ss_pred EeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 301 IDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.....+.|..||+. .....+...........++..+|.||+... ++.+..+|+.+.
T Consensus 241 ~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 241 TEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICFDGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEECSSCEEEEET-TTEEEEEEEC--
T ss_pred eccCCceEEEECCC-CceEEEeCCCCCCccceEEecCCCEEEEec-CCcEEEEEcCcc
Confidence 87667889999994 444443221111223333336678888754 678999998754
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.84 E-value=0.002 Score=58.10 Aligned_cols=183 Identities=11% Similarity=0.042 Sum_probs=102.8
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcce-eEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWC-AAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++..++.|+.+ ..+.+||..+++......+....... ..+ .-+++.++.|+.+. .+.+||..+
T Consensus 108 ~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA-------STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--------NIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS-------SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTT
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC--------cEEEEeCCC
Confidence 45566666532 36889999888754433333222211 222 22566666766543 678999988
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEE
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYG 300 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~ 300 (387)
.+ ....-...... ...+.+ ++..++.++.+..+.+||+.+.+-...-. ......+++. .++.+++
T Consensus 173 ~~----~~~~~~~~~~~-----i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 173 QT----LVRQFQGHTDG-----ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD---FTSQIFSLGYCPTGEWLA 240 (337)
T ss_dssp TE----EEEEECCCSSC-----EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECTTSSEEE
T ss_pred Cc----eeeeeecccCc-----eEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec---CCCceEEEEECCCCCEEE
Confidence 76 43322111111 223333 66666777766789999998775322211 1111123333 3566777
Q ss_pred EeCCCCeEEEEeCCCCceeEccccccccCceE--EEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 301 IDENSCTLSRYDEVMDDWKEVVKSDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++..++.+..||.++..=..+. ....... ....+++.++.++..+.+.+||+.+.
T Consensus 241 ~~~~~~~i~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 241 VGMESSNVEVLHVNKPDKYQLH---LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEETTSCEEEEETTSSCEEEEC---CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEcCCCcEEEEECCCCCeEEEc---CCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 7777889999999876432221 1222222 22335778888788888999998865
No 54
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.83 E-value=0.0039 Score=55.97 Aligned_cols=186 Identities=13% Similarity=0.090 Sum_probs=100.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeE--EEeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAA--GCSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+++.|+.+ ..+.+||..+.+-.. .+......... ..-++++++.|+.+. .+.+||..+
T Consensus 76 ~~~~l~s~~~d-------~~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~ 138 (312)
T 4ery_A 76 DSNLLVSASDD-------KTLKIWDVSSGKCLK--TLKGHSNYVFCCNFNPQSNLIVSGSFDE--------SVRIWDVKT 138 (312)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTCCEEE--EEECCSSCEEEEEECSSSSEEEEEETTS--------CEEEEETTT
T ss_pred CCCEEEEECCC-------CEEEEEECCCCcEEE--EEcCCCCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCC
Confidence 45666666643 357889988765322 11111111111 122456777776644 688999987
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEE
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYG 300 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~ 300 (387)
.+ -...-..... ...++.+ ++++++.++.+..+.+||..+.+-...-. .........++. .+++.++
T Consensus 139 ~~----~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 208 (312)
T 4ery_A 139 GK----CLKTLPAHSD-----PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI-DDDNPPVSFVKFSPNGKYIL 208 (312)
T ss_dssp CC----EEEEECCCSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CSSCCCEEEEEECTTSSEEE
T ss_pred CE----EEEEecCCCC-----cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEe-ccCCCceEEEEECCCCCEEE
Confidence 76 3222111111 1222322 56777777777789999998775432111 001111112222 2456666
Q ss_pred EeCCCCeEEEEeCCCCceeEcccc-cccc-C-ceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 301 IDENSCTLSRYDEVMDDWKEVVKS-DLLK-G-ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~W~~v~~~-~~~~-~-~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.++.++.+..||..+.+-...-.. .... . .......++++++.|+..+.|.+||+.+.
T Consensus 209 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 209 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp EEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred EEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 666788999999987643322111 1111 1 12222346777788777888999999865
No 55
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.81 E-value=0.00054 Score=64.77 Aligned_cols=178 Identities=11% Similarity=0.099 Sum_probs=98.8
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccc
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~ 243 (387)
.++++|+.+++++.+..++........+ .-++++++.++.+. .+.+||..+++ .......+......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--------~i~~~d~~~g~----~~~~~~~~~~~~~~ 169 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDE--------GMDVLDINSGQ----TVRLSPPEKYKKKL 169 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSS--------SEEEEETTTCC----EEEECCCHHHHTTC
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCC--------eEEEEECCCCe----EeeecCcccccccC
Confidence 6788888877666654444332211222 22678888876533 68999999888 55433221100000
Q ss_pred cceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCcee
Q 016552 244 EAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSRYDEVMDDWK 319 (387)
Q Consensus 244 ~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W~ 319 (387)
....++.+ ++++++.++.+..+.+||+.+++-...-. ........+++. ++.+|+.+..++.|.+||+++.+..
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD--LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI 247 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE--CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc--CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE
Confidence 11223333 78888887776789999998765332111 111111233333 4567777767789999999887554
Q ss_pred EccccccccCceEEE-EeCCeEEEEec--------CCCeEEEEeccCC
Q 016552 320 EVVKSDLLKGARHAA-AGGGRVCAVCE--------NGGGIVVVDVKAA 358 (387)
Q Consensus 320 ~v~~~~~~~~~~~~~-~~~g~i~v~gg--------~~~~i~~~d~~~~ 358 (387)
.... .......+. ..+|+.+++++ .+..+.+||+.+.
T Consensus 248 ~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 248 RKTD--KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EECC--CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEec--CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 3222 111122222 23555444444 2457889998754
No 56
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.81 E-value=0.0023 Score=56.77 Aligned_cols=181 Identities=11% Similarity=0.068 Sum_probs=102.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcce-eEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWC-AAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+|+.... ...+.+||+. ++....+ ++...... ..+. -++++|+..... ..+..||+.
T Consensus 30 ~g~l~v~~~~-------~~~v~~~~~~-~~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~v~~~d~~- 91 (300)
T 2qc5_A 30 DGKVWFTQHK-------ANKISSLDQS-GRIKEFE-VPTPDAKVMCLIVSSLGDIWFTENGA--------NKIGKLSKK- 91 (300)
T ss_dssp TSCEEEEETT-------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTT--------TEEEEECTT-
T ss_pred CCCEEEEcCC-------CCeEEEECCC-CceEEEE-CCCCCCcceeEEECCCCCEEEEecCC--------CeEEEECCC-
Confidence 5678886431 1368889988 6666532 12111112 2222 357898875322 267889988
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCC-cEEEE-eCCeEE
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRG-PVAAM-DEEVLY 299 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~-~~~~ly 299 (387)
++ +.... ++.... ....+.+ +|++|+.......+..||+. ++...... +..... ..+++ .+|+||
T Consensus 92 g~----~~~~~-~~~~~~---~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~--~~~~~~~~~i~~d~~g~l~ 160 (300)
T 2qc5_A 92 GG----FTEYP-LPQPDS---GPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL--PNKGSYPAFITLGSDNALW 160 (300)
T ss_dssp SC----EEEEE-CSSTTC---CEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC--SSTTCCEEEEEECTTSSEE
T ss_pred CC----eEEec-CCCCCC---CCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC--CCCCCCceeEEECCCCCEE
Confidence 66 65443 221111 1223333 68899876545689999998 65554321 111112 23333 357799
Q ss_pred EEeCCCCeEEEEeCCCCceeEccccccccCceEEEE-eCCeEEEEecCCCeEEEEecc
Q 016552 300 GIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 300 ~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~g~i~v~gg~~~~i~~~d~~ 356 (387)
+.+...+.|++||+ +++...+...........++. -+|.||+....+..+.++|..
T Consensus 161 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 161 FTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred EEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC
Confidence 98766778999999 666665432222222333333 367888886667788888884
No 57
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.78 E-value=0.001 Score=68.29 Aligned_cols=191 Identities=14% Similarity=0.063 Sum_probs=111.7
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEe--C--CEEEEEecCCCCCCCCCcceEEEEEC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS--R--GAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~v~~yd~ 221 (387)
++..++.|+.+ ..+.+||..++++..+..+........+... + +..++.|+.+. .+.+||.
T Consensus 20 dg~~latg~~d-------g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg--------~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG--------KVLIWKE 84 (753)
T ss_dssp SSCCEEEEETT-------TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS--------CEEEEEE
T ss_pred CCCeEEEEECC-------CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC--------eEEEEEC
Confidence 35556666543 3578899887777766555433322222222 3 67777777654 7889999
Q ss_pred CCCccccCeEEcCCCCCCCccccceEEEEE--C--CEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe---
Q 016552 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--- 294 (387)
Q Consensus 222 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~--g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--- 294 (387)
.++. |..+..+...... ..++.+ + +.+++.++.+..+.+||..++.-..............+++..
T Consensus 85 ~~~~----~~~~~~~~~h~~~---V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 85 ENGR----WSQIAVHAVHSAS---VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp ETTE----EEEEEEECCCSSC---EEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred CCCc----ccccccccCCCCC---eEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 9988 7766544322111 223333 3 667777777789999999876322111100001111222222
Q ss_pred -----------CCeEEEEeCCCCeEEEEeCCCC--ceeEccccccccCceEEEE--eC---CeEEEEecCCCeEEEEecc
Q 016552 295 -----------EEVLYGIDENSCTLSRYDEVMD--DWKEVVKSDLLKGARHAAA--GG---GRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 295 -----------~~~ly~~~~~~~~l~~yd~~~~--~W~~v~~~~~~~~~~~~~~--~~---g~i~v~gg~~~~i~~~d~~ 356 (387)
++.+++.++.++.|..||..++ .+..+..+.........+. .+ +++++.|+..+.|.+||+.
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 3566777777889999998664 3444443333333333333 33 6888888888889999998
Q ss_pred CC
Q 016552 357 AA 358 (387)
Q Consensus 357 ~~ 358 (387)
+.
T Consensus 238 ~~ 239 (753)
T 3jro_A 238 NE 239 (753)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 58
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.77 E-value=0.016 Score=52.55 Aligned_cols=188 Identities=11% Similarity=-0.011 Sum_probs=109.6
Q ss_pred eEEEEE--CCEEEEEecccCCCCCCCCccEEEeccC----CceeeC-C-CCCCCCcceeEEE--eCCEEEEEecCCCCCC
Q 016552 140 VQLVSL--SGKLILLAATTHNFNPALTRPLIFDPIC----RTWTFG-P-ELVTPRRWCAAGC--SRGAVYVASGIGSQFS 209 (387)
Q Consensus 140 ~~~~~~--~~~l~v~GG~~~~~~~~~~~~~vyd~~t----~~W~~l-~-~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~ 209 (387)
.+.+.. ++.||+.... ...++++|+.+ ..-..+ + .+..| ...++ .+++||++-..
T Consensus 33 ~g~~~d~~~~~ly~~D~~-------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~glavd~~~~~ly~~d~~----- 97 (316)
T 1ijq_A 33 VALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDSV----- 97 (316)
T ss_dssp EEEEEETTTTEEEEEETT-------TTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEETT-----
T ss_pred EEEEEEeCCCEEEEEECC-------CCcEEEEECCCCCCCcccEEEEeCCCCCc---CEEEEeecCCeEEEEECC-----
Confidence 344443 5789988542 24688898876 222222 1 12222 12333 47899998432
Q ss_pred CCCcceEEEEECCCCccccCeEEcC--CCCCCCccccceEEEE--ECCEEEEEeeeC-CeEEEEECCCCceeeccccccc
Q 016552 210 SDVAKSVEKWDLMNGEKNSRWEKTG--ELKDGRFSREAIDAVG--WKGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVR 284 (387)
Q Consensus 210 ~~~~~~v~~yd~~~~~~~~~W~~~~--~~p~~~~~~~~~~~~~--~~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~ 284 (387)
...+.++|+.... -..+. .+..+ ...++ .+|.||+..... ..|+++|+....=+.+.. .
T Consensus 98 ---~~~I~~~~~~g~~----~~~~~~~~~~~P------~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~---~ 161 (316)
T 1ijq_A 98 ---LGTVSVADTKGVK----RKTLFRENGSKP------RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---E 161 (316)
T ss_dssp ---TTEEEEEETTSSS----EEEEEECTTCCE------EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC---S
T ss_pred ---CCEEEEEeCCCCc----eEEEEECCCCCc------ceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE---C
Confidence 2478889987654 33322 12211 12222 368899886433 589999986543332211 1
Q ss_pred CCCC-cEEEEe--CCeEEEEeCCCCeEEEEeCCCCceeEcccc-ccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 285 GWRG-PVAAMD--EEVLYGIDENSCTLSRYDEVMDDWKEVVKS-DLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 285 ~~~~-~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~-~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.... .++++. +++||+.+...+.|.++|.+...=+.+... .....+.+++..++.||+.-..+..|..+|..++
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCC
Confidence 1112 244554 689999998788999999986544444332 2234456667778999999777889999998644
No 59
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.77 E-value=0.0098 Score=55.76 Aligned_cols=183 Identities=10% Similarity=-0.043 Sum_probs=109.8
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCC--CCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPE--LVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~--~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.||+.-- ....++++++.....+.+.. +..|. ..+....+++||+.-.. .+.++++++..
T Consensus 127 ~~~ly~~D~-------~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~--------~~~I~~~~~dg 190 (386)
T 3v65_B 127 RELVFWSDV-------TLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSG--------TSRIEVANLDG 190 (386)
T ss_dssp TTEEEEEET-------TTTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETT--------TTEEEECBTTS
T ss_pred CCeEEEEeC-------CCCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCC--------CCeEEEEeCCC
Confidence 578888743 22468999998876655422 22222 11122247899998432 23778888765
Q ss_pred CccccCeEEcC--CCCCCCccccceEEEE--ECCEEEEEeeeC-CeEEEEECCCCceeecccccccCCCC-cEEEE--eC
Q 016552 224 GEKNSRWEKTG--ELKDGRFSREAIDAVG--WKGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRG-PVAAM--DE 295 (387)
Q Consensus 224 ~~~~~~W~~~~--~~p~~~~~~~~~~~~~--~~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~--~~ 295 (387)
.. -..+. .+..+ ...++ .+|.||+..... ..|+++|+....-..+.. .+... .++++ .+
T Consensus 191 ~~----~~~l~~~~l~~P------~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~---~~~~~PnGlavd~~~ 257 (386)
T 3v65_B 191 AH----RKVLLWQSLEKP------RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD---THLFWPNGLTIDYAG 257 (386)
T ss_dssp CS----CEEEECSSCSCE------EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SSCSCEEEEEEEGGG
T ss_pred Cc----eEEeecCCCCCC------cEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE---CCCCCeeeEEEeCCC
Confidence 54 33332 12111 11222 268899886554 689999987643333221 11111 23444 47
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 296 EVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 296 ~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++||+.+...+.|+++|.+...=+.+... ....+.+++..++.||+.-..+..|..+|..++
T Consensus 258 ~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 258 RRMYWVDAKHHVIERANLDGSHRKAVISQ-GLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp TEEEEEETTTTEEEEECTTSCSCEEEECS-SCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEECCCCEEEEEeCCCCeeEEEEEC-CCCCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 89999998788999999876433333221 233456667788999999877888999985433
No 60
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.77 E-value=0.0061 Score=55.38 Aligned_cols=186 Identities=10% Similarity=-0.011 Sum_probs=101.9
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCcc
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEK 226 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~ 226 (387)
+.+++.|+.+ ..+.+||..+.+-...-..........+..-+++.++.|+.+. .+.+||..+.+
T Consensus 92 ~~~l~s~s~D-------~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg--------~v~i~~~~~~~- 155 (321)
T 3ow8_A 92 LPIAASSSLD-------AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVG--------KVNIFGVESGK- 155 (321)
T ss_dssp SSEEEEEETT-------SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTS--------EEEEEETTTCS-
T ss_pred CCEEEEEeCC-------CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCC--------cEEEEEcCCCc-
Confidence 4455555533 3578889887754321111111111222233566777766543 77889988776
Q ss_pred ccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEeCCC
Q 016552 227 NSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENS 305 (387)
Q Consensus 227 ~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~ 305 (387)
-...-..... .. ...+..-+|++.+.++.+..+.+||..+++-...-. .......+++. .++++++.++.+
T Consensus 156 ---~~~~~~~~~~-~v--~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 156 ---KEYSLDTRGK-FI--LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE--GHAMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp ---EEEEEECSSS-CE--EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--CCSSCCCEEEECTTSCEEEEECTT
T ss_pred ---eeEEecCCCc-eE--EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc--ccCCceeEEEEcCCCCEEEEEcCC
Confidence 2211111111 10 011222367777777777889999998875322111 01111223443 356777777778
Q ss_pred CeEEEEeCCCCceeEccccccccCceEEE--EeCCeEEEEecCCCeEEEEeccCC
Q 016552 306 CTLSRYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 306 ~~l~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+.|.+||..+..-.. .+.........+ ..+++.++.|+....+.+||+.+.
T Consensus 228 g~i~iwd~~~~~~~~--~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 228 GYIKIYDVQHANLAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp SCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CeEEEEECCCcceeE--EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 899999998764432 222222222222 236778888888888999999854
No 61
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.76 E-value=0.0064 Score=55.27 Aligned_cols=185 Identities=10% Similarity=0.030 Sum_probs=100.9
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEE--EeCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAG--CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
+.+++.|+.+. .+.++|..+.+......+........++ ..++.+.+.|+.+. .+.+||..++
T Consensus 48 ~~~l~tgs~D~-------~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~--------~i~lWd~~~~ 112 (321)
T 3ow8_A 48 SETVVTGSLDD-------LVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDA--------HIRLWDLENG 112 (321)
T ss_dssp -CEEEEEETTS-------CEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTT
T ss_pred CCEEEEEcCCC-------CEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCC--------cEEEEECCCC
Confidence 34666666433 4677777665543322222222111122 22456666766644 7889999887
Q ss_pred ccccCeEE-cCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEe
Q 016552 225 EKNSRWEK-TGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGID 302 (387)
Q Consensus 225 ~~~~~W~~-~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~ 302 (387)
+ -.. +..-+.... ..+..-+++..+.++....+.+||..+++-...-. .......+++. .++++++.+
T Consensus 113 ~----~~~~~~~~~~~~~----~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~--~~~~~v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 113 K----QIKSIDAGPVDAW----TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD--TRGKFILSIAYSPDGKYLASG 182 (321)
T ss_dssp E----EEEEEECCTTCCC----CEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE--CSSSCEEEEEECTTSSEEEEE
T ss_pred C----EEEEEeCCCccEE----EEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec--CCCceEEEEEECCCCCEEEEE
Confidence 6 322 221111110 22233366766676666789999988765321111 11111122332 356777777
Q ss_pred CCCCeEEEEeCCCCceeEccccccccCc--eEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 303 ENSCTLSRYDEVMDDWKEVVKSDLLKGA--RHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~~l~~yd~~~~~W~~v~~~~~~~~~--~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+.++.|..||.++.+-. ..+...... ......++++++.|+....|.+||+.+.
T Consensus 183 ~~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 183 AIDGIINIFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp ETTSCEEEEETTTTEEE--EEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred cCCCeEEEEECCCCcEE--EEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 77889999999887432 222222222 2233446788888888888999999854
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.75 E-value=0.0056 Score=57.31 Aligned_cols=174 Identities=9% Similarity=-0.040 Sum_probs=97.0
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccc
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~ 243 (387)
.+.+||..+++..............+.+. -+++++++|+.+. .+.+||..+.+ -...-.....
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg--------~i~iwd~~~~~----~~~~~~~~~~---- 177 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG--------LVDIYDVESQT----KLRTMAGHQA---- 177 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCC----EEEEECCCSS----
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC--------eEEEEECcCCe----EEEEecCCCC----
Confidence 68999999887766544332222222222 2566777766543 67899998877 3332211111
Q ss_pred cceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceeEcc
Q 016552 244 EAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMDDWKEVV 322 (387)
Q Consensus 244 ~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~W~~v~ 322 (387)
...++..++.+++.++.+..+.+||.....-..... ........+++.. ++.+++.++.++.|.+||..+..-..
T Consensus 178 -~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~-- 253 (401)
T 4aez_A 178 -RVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTL-QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKF-- 253 (401)
T ss_dssp -CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEE--
T ss_pred -ceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEE-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccE--
Confidence 133445577777777777899999998433111110 0011111223332 56677777778899999998753222
Q ss_pred ccccccCc-eEEEEe--CCeEEEEec--CCCeEEEEeccCC
Q 016552 323 KSDLLKGA-RHAAAG--GGRVCAVCE--NGGGIVVVDVKAA 358 (387)
Q Consensus 323 ~~~~~~~~-~~~~~~--~g~i~v~gg--~~~~i~~~d~~~~ 358 (387)
........ .++... ++.+++.|+ ....+.+||+.+.
T Consensus 254 ~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 254 TKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp EECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC
T ss_pred EecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC
Confidence 11112222 222222 456777765 4678999998854
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.74 E-value=0.0024 Score=58.60 Aligned_cols=189 Identities=8% Similarity=0.021 Sum_probs=98.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCC-cceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPR-RWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+++.|+.+ ..+.+||..++++.....+.... .....+ .-+++.++.|+.+. .+.+||..+
T Consensus 63 ~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~v~i~d~~~ 127 (372)
T 1k8k_C 63 DSNRIVTCGTD-------RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR--------VISICYFEQ 127 (372)
T ss_dssp TTTEEEEEETT-------SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS--------SEEEEEEET
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--------EEEEEEecC
Confidence 45666666643 35889999888876543322222 112222 22566667766543 567777766
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCc---------eee-------cccccccC
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANT---------WDD-------MREGMVRG 285 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~---------W~~-------~~~~~~~~ 285 (387)
... |........+.. ....++.+ ++.+++.++.+..+.+||..... |.. +.......
T Consensus 128 ~~~---~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (372)
T 1k8k_C 128 END---WWVCKHIKKPIR--STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC 202 (372)
T ss_dssp TTT---EEEEEEECTTCC--SCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS
T ss_pred CCc---ceeeeeeecccC--CCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC
Confidence 541 333222211111 11222322 66777777766789999964221 111 11100001
Q ss_pred CCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCc--eEEEEeCCeEEEEecCCCeEEEEeccC
Q 016552 286 WRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGA--RHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 286 ~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~--~~~~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
....+++. .++.+++.++.++.+..||.++.+-.. ........ .....-++++++.| .++.+.+||+..
T Consensus 203 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 203 GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA--TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE--EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE--EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 01122333 255566666678899999998765332 22222222 22334467776665 777899999986
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.73 E-value=0.002 Score=58.03 Aligned_cols=183 Identities=10% Similarity=0.014 Sum_probs=100.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++..++.|+.+ ..+.+||..+.+....-.............-+++.++.|+.+. .+.+||..+.+
T Consensus 152 ~~~~l~~~~~d-------g~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~i~~~d~~~~~ 216 (337)
T 1gxr_A 152 DSKVCFSCCSD-------GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN--------TVRSWDLREGR 216 (337)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTE
T ss_pred CCCEEEEEeCC-------CcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCC--------cEEEEECCCCc
Confidence 45566666633 3588999988754432111111111111222566666766543 78899998876
Q ss_pred cccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CCeEEEEeCC
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEVLYGIDEN 304 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~~ly~~~~~ 304 (387)
-...-..+... ......-+++++++++....+.+||..+..=..... .......++.. ++++++.++.
T Consensus 217 ----~~~~~~~~~~v----~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 217 ----QLQQHDFTSQI----FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL---HESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp ----EEEEEECSSCE----EEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC---CSSCEEEEEECTTSSEEEEEET
T ss_pred ----eEeeecCCCce----EEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC---CccceeEEEECCCCCEEEEecC
Confidence 33222222111 011222367777777766789999998775332221 11111233332 4566677767
Q ss_pred CCeEEEEeCCCCceeEccccccccCceE-EEEeCCeEEEEecCCCeEEEEecc
Q 016552 305 SCTLSRYDEVMDDWKEVVKSDLLKGARH-AAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 305 ~~~l~~yd~~~~~W~~v~~~~~~~~~~~-~~~~~g~i~v~gg~~~~i~~~d~~ 356 (387)
++.+..||.++++-.... ........ ....+++.+++++..+.+.+||+.
T Consensus 286 dg~i~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 286 DNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp TSEEEEEETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCcEEEEECCCCeEEEEe--cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 889999999887544221 11111122 223467788887778888888863
No 65
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.73 E-value=0.028 Score=51.87 Aligned_cols=183 Identities=8% Similarity=-0.072 Sum_probs=110.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.||+.-- ....++++++.+...+.+........ ...++ .+++||+.-.. .+.++++++..
T Consensus 84 ~~~ly~~D~-------~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd~~~g~ly~~d~~--------~~~I~~~~~dG 147 (349)
T 3v64_C 84 RELVFWSDV-------TLDRILRANLNGSNVEEVVSTGLESP-GGLAVDWVHDKLYWTDSG--------TSRIEVANLDG 147 (349)
T ss_dssp TTEEEEEET-------TTTEEEEEETTSCSCEEEECSSCSCC-CEEEEETTTTEEEEEETT--------TTEEEEEETTS
T ss_pred ccEEEEEec-------cCCceEEEecCCCCceEEEeCCCCCc-cEEEEecCCCeEEEEcCC--------CCeEEEEcCCC
Confidence 578888743 22468889988776555322111111 12233 47899998432 23788888876
Q ss_pred CccccCeEEcC--CCCCCCccccceEEEE--ECCEEEEEeeeC-CeEEEEECCCCceeecccccccCCCC-cEEEE--eC
Q 016552 224 GEKNSRWEKTG--ELKDGRFSREAIDAVG--WKGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRG-PVAAM--DE 295 (387)
Q Consensus 224 ~~~~~~W~~~~--~~p~~~~~~~~~~~~~--~~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~--~~ 295 (387)
.. -..+. .+..+ ...++ .+|.||+..... ..|+++|+....-+.+.. .+... .++++ .+
T Consensus 148 ~~----~~~l~~~~l~~P------~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~---~~~~~PnGla~d~~~ 214 (349)
T 3v64_C 148 AH----RKVLLWQSLEKP------RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD---THLFWPNGLTIDYAG 214 (349)
T ss_dssp CS----CEEEECTTCSCE------EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC---SSCSCEEEEEEETTT
T ss_pred Cc----eEEEEeCCCCCc------ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE---CCCCCcceEEEeCCC
Confidence 54 33332 12211 12223 268899887555 689999987654333321 11111 23454 37
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 296 EVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 296 ~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++||+.+...+.|+++|++...=+.+... ....+.+++..++.||+.-..+..|..+|..++
T Consensus 215 ~~lY~aD~~~~~I~~~~~dG~~~~~~~~~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 215 RRMYWVDAKHHVIERANLDGSHRKAVISQ-GLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEECCCCEEEEEeCCCCceEEEEeC-CCCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 89999998788999999986533333221 133456666688999999878888999985433
No 66
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.72 E-value=0.0065 Score=55.93 Aligned_cols=187 Identities=12% Similarity=0.074 Sum_probs=99.2
Q ss_pred ECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCC---CCCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEE
Q 016552 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPEL---VTPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd 220 (387)
..+..++.|+.+ ..+.+||..+++-...... .......+.+ .-+++.++.|+.+. .+.+||
T Consensus 91 s~d~~l~~~s~d-------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~--------~i~iwd 155 (344)
T 4gqb_B 91 VGERGILVASDS-------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI--------CIKVWD 155 (344)
T ss_dssp ETTTEEEEEETT-------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEEEE
T ss_pred eCCCeEEEEECC-------CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC--------eEEEEE
Confidence 344445555532 3578899887753221111 1111111222 23667777777654 688999
Q ss_pred CCCCccccCeEEcCCCCCCCccccceEEEE--ECC-EEEEEeeeCCeEEEEECCCCceee-cccccccCCCCcEEEE--e
Q 016552 221 LMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKG-KLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWRGPVAAM--D 294 (387)
Q Consensus 221 ~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~--~~g-~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~~--~ 294 (387)
..+++ -...-.-... ...++. .++ .+++.++.+..+.+||..+.+-.. +.. ...+....+++. .
T Consensus 156 ~~~~~----~~~~~~~h~~-----~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~p~ 225 (344)
T 4gqb_B 156 LAQQV----VLSSYRAHAA-----QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC-SAPGYLPTSLAWHPQ 225 (344)
T ss_dssp TTTTE----EEEEECCCSS-----CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSS
T ss_pred CCCCc----EEEEEcCcCC-----ceEEEEecCCCCCceeeeccccccccccccccceeeeeec-ceeeccceeeeecCC
Confidence 98877 3221111111 122222 234 466667766789999998775432 211 111111223333 2
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEe--CC-eEEEEecCCCeEEEEeccCC
Q 016552 295 EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAG--GG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~--~g-~i~v~gg~~~~i~~~d~~~~ 358 (387)
++++++.+..++.|.+||.++.+ .+..+.........++. ++ ++++.|+....|.+||..+.
T Consensus 226 ~~~~l~sg~~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 226 QSEVFVFGDENGTVSLVDTKSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp CTTEEEEEETTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred CCcceEEeccCCcEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 56778888778999999998753 22233223333333332 34 56666777788999998855
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.71 E-value=0.01 Score=55.43 Aligned_cols=189 Identities=9% Similarity=0.002 Sum_probs=101.2
Q ss_pred ECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
.++.+++.|+.+ ..+.+||..+++-...-.... ....+.+ .-++++++.|+.+. .+.+||..+
T Consensus 107 ~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~d~--------~i~iwd~~~ 170 (420)
T 3vl1_A 107 LQMRRFILGTTE-------GDIKVLDSNFNLQREIDQAHV-SEITKLKFFPSGEALISSSQDM--------QLKIWSVKD 170 (420)
T ss_dssp SSSCEEEEEETT-------SCEEEECTTSCEEEEETTSSS-SCEEEEEECTTSSEEEEEETTS--------EEEEEETTT
T ss_pred cCCCEEEEEECC-------CCEEEEeCCCcceeeeccccc-CccEEEEECCCCCEEEEEeCCC--------eEEEEeCCC
Confidence 356677777643 257899988776544321111 1111222 22566667776544 789999987
Q ss_pred CccccCeEEcCCCCCCCccccceEEE-EECCEEEEEeeeCCeEEEEECCCCceee-cccccccCCCCcEEEE--------
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAV-GWKGKLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWRGPVAAM-------- 293 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~-~~~g~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~~-------- 293 (387)
.+. -..+...... . ...+ .-++.+.+.++.+..+.+||..+++-.. +............++.
T Consensus 171 ~~~---~~~~~~h~~~-v----~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 171 GSN---PRTLIGHRAT-V----TDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp CCC---CEEEECCSSC-E----EEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred CcC---ceEEcCCCCc-E----EEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCccee
Confidence 761 1122111111 0 1122 2266666677766789999998774321 1110000000011111
Q ss_pred --------------eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEE--eCCe-EEEEecCCCeEEEEecc
Q 016552 294 --------------DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA--GGGR-VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 294 --------------~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~g~-i~v~gg~~~~i~~~d~~ 356 (387)
.++++++.+..++.+..||..+..-..... .........+. -+++ +++.|+..+.+.+||+.
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP-SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC-CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc-cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 256677777778899999998764222111 11222222222 3455 78887888899999998
Q ss_pred CC
Q 016552 357 AA 358 (387)
Q Consensus 357 ~~ 358 (387)
+.
T Consensus 322 ~~ 323 (420)
T 3vl1_A 322 SP 323 (420)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 68
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.71 E-value=0.0031 Score=56.99 Aligned_cols=147 Identities=10% Similarity=0.072 Sum_probs=77.0
Q ss_pred CEEEEEecCCCCCCCCCcceEEEEECCC-CccccCeEEcC----CCCCCCccccceEEEEECCE-EEEEeeeCCeEEEEE
Q 016552 196 GAVYVASGIGSQFSSDVAKSVEKWDLMN-GEKNSRWEKTG----ELKDGRFSREAIDAVGWKGK-LCLVNVKGAEGAVYD 269 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~-~~~~~~W~~~~----~~p~~~~~~~~~~~~~~~g~-lyv~gg~~~~i~~yD 269 (387)
..||+.+..+ ..+.+||..+ ++ ...+. ..+..... ...+..-+|+ +|+.+.....+.+||
T Consensus 141 ~~l~~~~~~~--------~~v~~~d~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~pdg~~l~~~~~~~~~i~~~~ 206 (343)
T 1ri6_A 141 RTLWVPALKQ--------DRICLFTVSDDGH----LVAQDPAEVTTVEGAGP--RHMVFHPNEQYAYCVNELNSSVDVWE 206 (343)
T ss_dssp SEEEEEEGGG--------TEEEEEEECTTSC----EEEEEEEEEECSTTCCE--EEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CEEEEecCCC--------CEEEEEEecCCCc----eeeecccccccCCCCCc--ceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3577765332 2688899887 55 54322 11111111 0112222554 676665557899999
Q ss_pred CC--CCceeeccc--ccccCCC---Cc-EEEEe--CCeEEEEeCCCCeEEEEeCC--CCceeEccccccccCceE-EEEe
Q 016552 270 VV--ANTWDDMRE--GMVRGWR---GP-VAAMD--EEVLYGIDENSCTLSRYDEV--MDDWKEVVKSDLLKGARH-AAAG 336 (387)
Q Consensus 270 ~~--~~~W~~~~~--~~~~~~~---~~-~~~~~--~~~ly~~~~~~~~l~~yd~~--~~~W~~v~~~~~~~~~~~-~~~~ 336 (387)
.. ++++..... ..+.+.. .+ .+++. +..||+.+..++.+.+||.+ +++++.+...+....... ...-
T Consensus 207 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~ 286 (343)
T 1ri6_A 207 LKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDH 286 (343)
T ss_dssp SSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECT
T ss_pred ecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECC
Confidence 84 455433221 1222211 11 23333 34677776667889999987 566776655433222222 2333
Q ss_pred CCe-EEEEecCCCeEEEEecc
Q 016552 337 GGR-VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 337 ~g~-i~v~gg~~~~i~~~d~~ 356 (387)
+|+ |++.+...+.+.+|+++
T Consensus 287 dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 287 SGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TSSEEEEECTTTCEEEEEEEE
T ss_pred CCCEEEEecCCCCeEEEEEEc
Confidence 555 55554456778888554
No 69
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.70 E-value=0.0023 Score=58.51 Aligned_cols=229 Identities=14% Similarity=0.063 Sum_probs=117.8
Q ss_pred CCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCEEEEEecccCCCCCCCCccEEEeccCCce
Q 016552 97 STPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTW 176 (387)
Q Consensus 97 ~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W 176 (387)
+..+.++.+|..++++..+...... .+|. .-+..-+++||+.+... ....+++||..++++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~-------~~p~-------~~a~spdg~l~~~~~~~-----~~~~v~~~~~~~g~~ 75 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAAT-------QNPT-------YLALSAKDCLYSVDKED-----DEGGIAAWQIDGQTA 75 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEEC-------SCCC-------CEEECTTCEEEEEEEET-----TEEEEEEEEEETTEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeecc-------CCcc-------eEEEccCCeEEEEEecC-----CCceEEEEEecCCcE
Confidence 4566788889988877654321110 0010 12233467777765421 124689999988887
Q ss_pred eeCCCCCC--CCcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECC-CCccccCeEEcCCCCC------CCccccce
Q 016552 177 TFGPELVT--PRRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLM-NGEKNSRWEKTGELKD------GRFSREAI 246 (387)
Q Consensus 177 ~~l~~~p~--~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~-~~~~~~~W~~~~~~p~------~~~~~~~~ 246 (387)
+.+..... ......+..-++ .||+.+..+ ..+.+||.. ++. ...+...+. .+......
T Consensus 76 ~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~--------~~v~v~~~~~~g~----~~~~~~~~~~~~~p~~~~~~~~~ 143 (347)
T 3hfq_A 76 HKLNTVVAPGTPPAYVAVDEARQLVYSANYHK--------GTAEVMKIAADGA----LTLTDTVQHSGHGPRPEQDGSHI 143 (347)
T ss_dssp EEEEEEEEESCCCSEEEEETTTTEEEEEETTT--------TEEEEEEECTTSC----EEEEEEEECCCCCSSTTCSSCCE
T ss_pred EEeeeeecCCCCCEEEEECCCCCEEEEEeCCC--------CEEEEEEeCCCCC----eeecceeecCCCCCCccccCCCc
Confidence 76654321 111222223344 577765322 267788874 333 333321111 00000012
Q ss_pred EEE--EECCEEEEEeeeCCeEEEEECC-CCceeecccc-cccCCCCcEEEE-eCC-eEEEEeCCCCeEEEEeCC--CCce
Q 016552 247 DAV--GWKGKLCLVNVKGAEGAVYDVV-ANTWDDMREG-MVRGWRGPVAAM-DEE-VLYGIDENSCTLSRYDEV--MDDW 318 (387)
Q Consensus 247 ~~~--~~~g~lyv~gg~~~~i~~yD~~-~~~W~~~~~~-~~~~~~~~~~~~-~~~-~ly~~~~~~~~l~~yd~~--~~~W 318 (387)
..+ .-+|++|+.+.....+.+||+. +++...+... ...+.....+++ -+| .||+.+...+.+.+||.+ ++++
T Consensus 144 ~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 223 (347)
T 3hfq_A 144 HYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF 223 (347)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred eEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce
Confidence 222 2377877766555789999988 5555543321 111111112333 244 488877667777777765 4666
Q ss_pred eEcccccccc-------Cce-EEEEeCCe-EEEEecCCCeEEEEecc
Q 016552 319 KEVVKSDLLK-------GAR-HAAAGGGR-VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 319 ~~v~~~~~~~-------~~~-~~~~~~g~-i~v~gg~~~~i~~~d~~ 356 (387)
..+....... ... ....-+|+ ||+.....+.+.+||+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 224 TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 5544322111 122 22334565 66776667889999986
No 70
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.69 E-value=0.0036 Score=56.96 Aligned_cols=181 Identities=13% Similarity=0.019 Sum_probs=92.7
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEeC-CEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCc-
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCSR-GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF- 241 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~- 241 (387)
..++++|+.+.+-...-+... +....+..-+ +.+|+.+..+ ..+.+||..+.+ -...-+.+....
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~--------~~v~~~d~~~~~----~~~~~~~~~~~~~ 135 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVN--------SAVTAIDAKTGE----VKGRLVLDDRKRT 135 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTT--------TEEEEEETTTCC----EEEEEESCCCCCC
T ss_pred ccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCC--------CEEEEEeCCCCe----eEEEEecCCCccc
Confidence 468999998876544222221 1112222234 4588876543 278999998887 322221211100
Q ss_pred --c-ccceEEEEE--CC-EEEEEee-eCCeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCC
Q 016552 242 --S-REAIDAVGW--KG-KLCLVNV-KGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEV 314 (387)
Q Consensus 242 --~-~~~~~~~~~--~g-~lyv~gg-~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~ 314 (387)
. ......+.+ +| .+|+.+. ....+.+||+.+.+-...-........+......++.||+.. .++.+.+||.+
T Consensus 136 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~i~~~d~~ 214 (353)
T 3vgz_A 136 EEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTN-ADGELITIDTA 214 (353)
T ss_dssp SSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEEC-TTSEEEEEETT
T ss_pred cccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEc-CCCeEEEEECC
Confidence 0 000112222 44 5777663 346799999987753221110111111222222345566654 46789999998
Q ss_pred CCceeEcccccc--ccC-ceEE-EEeC-CeEEEEecCCCeEEEEeccCC
Q 016552 315 MDDWKEVVKSDL--LKG-ARHA-AAGG-GRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 315 ~~~W~~v~~~~~--~~~-~~~~-~~~~-g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+.+-........ ... ...+ ..-+ +.+|+....++.+.++|+.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 215 DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 875333222211 111 1222 2334 457777666789999999754
No 71
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.69 E-value=0.016 Score=52.65 Aligned_cols=193 Identities=11% Similarity=0.116 Sum_probs=103.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCC--ceeeCCCC------CCCCcce-eEEEe--CCEEEEEecCCCCCCCCCcc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPEL------VTPRRWC-AAGCS--RGAVYVASGIGSQFSSDVAK 214 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~--~W~~l~~~------p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~ 214 (387)
++.||+.... ...+.+||+..+ .-..+... ......+ ..++. ++.|||..+... .
T Consensus 101 ~g~l~v~d~~-------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~-------~ 166 (329)
T 3fvz_A 101 DGNYWVTDVA-------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN-------S 166 (329)
T ss_dssp TSCEEEEETT-------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC-------C
T ss_pred CCCEEEEECC-------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC-------C
Confidence 5678887542 246889998765 22222211 0111122 22332 679999975322 3
Q ss_pred eEEEEECCCCccccCeEEcCCCCC------CCccccceEEEEE--C-CEEEEEeeeCCeEEEEECCCCceeecccccccC
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKD------GRFSREAIDAVGW--K-GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRG 285 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~------~~~~~~~~~~~~~--~-g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~ 285 (387)
.+.+||+.... -..+..... ..+. ....+.+ + |.||+.......+.+||+.+++....-.....+
T Consensus 167 ~I~~~~~~g~~----~~~~~~~g~~~~~~~~~~~--~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~ 240 (329)
T 3fvz_A 167 RIVQFSPSGKF----VTQWGEESSGSSPRPGQFS--VPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFG 240 (329)
T ss_dssp EEEEECTTSCE----EEEECEECCSSSCCTTEES--CEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTT
T ss_pred eEEEEcCCCCE----EEEeccCCCCCCCCCcccC--CCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccC
Confidence 78888854433 223321110 0111 1223333 4 899998877788999999977654321111111
Q ss_pred CCCcEEEEeCCeEEEEeC-------CCCeEEEEeCCCCceeEccc-c-ccccCceEEE-EeCCeEEEEecCCCeEEEEec
Q 016552 286 WRGPVAAMDEEVLYGIDE-------NSCTLSRYDEVMDDWKEVVK-S-DLLKGARHAA-AGGGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 286 ~~~~~~~~~~~~ly~~~~-------~~~~l~~yd~~~~~W~~v~~-~-~~~~~~~~~~-~~~g~i~v~gg~~~~i~~~d~ 355 (387)
.....++...+.+|...+ ....+.+||..+++....-. . .....+..++ .-+|.||+....++.|.+|++
T Consensus 241 ~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 241 RNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp TCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred CCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 111122333345555543 34479999988876554322 1 1222233333 346789999888889999998
Q ss_pred cCC
Q 016552 356 KAA 358 (387)
Q Consensus 356 ~~~ 358 (387)
...
T Consensus 321 ~~~ 323 (329)
T 3fvz_A 321 TEK 323 (329)
T ss_dssp EEC
T ss_pred Ccc
Confidence 743
No 72
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.69 E-value=0.0037 Score=56.17 Aligned_cols=188 Identities=9% Similarity=0.007 Sum_probs=100.5
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++..++.|+.++ .+.+||..+.+....-.-. .......+ .-++++++.|+.+. .+.+||..+.
T Consensus 34 ~~~~l~s~~~dg-------~i~iw~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d~--------~i~vwd~~~~ 97 (312)
T 4ery_A 34 NGEWLASSSADK-------LIKIWGAYDGKFEKTISGH-KLGISDVAWSSDSNLLVSASDDK--------TLKIWDVSSG 97 (312)
T ss_dssp TSSEEEEEETTS-------CEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTC
T ss_pred CCCEEEEeeCCC-------eEEEEeCCCcccchhhccC-CCceEEEEEcCCCCEEEEECCCC--------EEEEEECCCC
Confidence 345566665332 5788888777655421111 11111122 22567777777644 7889999887
Q ss_pred ccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEeC
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDE 303 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~ 303 (387)
+ -...-.-..... .+....-++.+.+.++.+..+.+||+.+++-...-. .......+++. .++.+++.+.
T Consensus 98 ~----~~~~~~~~~~~v---~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 98 K----CLKTLKGHSNYV---FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP--AHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp C----EEEEEECCSSCE---EEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEE
T ss_pred c----EEEEEcCCCCCE---EEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec--CCCCcEEEEEEcCCCCEEEEEe
Confidence 6 322111111100 011122256666677777789999998765321111 00111122333 2566777777
Q ss_pred CCCeEEEEeCCCCceeEcccccccc-CceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 304 NSCTLSRYDEVMDDWKEVVKSDLLK-GARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 304 ~~~~l~~yd~~~~~W~~v~~~~~~~-~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.++.+..||..+..-.......... ........+++.++.++..+.+.+||+.+.
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 7889999999877543321111111 112223346777777777788999998754
No 73
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.68 E-value=0.005 Score=54.90 Aligned_cols=190 Identities=8% Similarity=0.012 Sum_probs=107.1
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCc--eeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRT--WTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~--W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
+++++.+..+ ..+.++|+.|++ |+.-..-. ...+.....-+|++++.+ + +.+.+||+ ++
T Consensus 5 ~~~lv~~~~~-------~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~--~--------~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSGW-------NKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY--S--------KGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTTC-------SEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC--B--------SEEEEECT-TS
T ss_pred CcEEEeeCCC-------CEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC--C--------CCEEEECC-CC
Confidence 5666665422 468889987774 66532110 123344455578888832 1 25888999 66
Q ss_pred ccccCeEEcCCCCCCCccccceEEEEECCEEEEEeee-CCeEEEEECCCC-ceeec-cccc--ccCCCCcEEEEeCCeEE
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVK-GAEGAVYDVVAN-TWDDM-REGM--VRGWRGPVAAMDEEVLY 299 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~-~~~i~~yD~~~~-~W~~~-~~~~--~~~~~~~~~~~~~~~ly 299 (387)
+.. |+.-.+..... ......-+|++++.... ...+..+|++.. .|+.. .... +...........+|.++
T Consensus 66 ~~~--W~~~~~~~~~~----~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l 139 (276)
T 3no2_A 66 REL--WNIAAPAGCEM----QTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYL 139 (276)
T ss_dssp CEE--EEEECCTTCEE----EEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEE
T ss_pred CEE--EEEcCCCCccc----cccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEE
Confidence 544 77544211110 02233457888777654 457888898544 34422 1111 00111122334466777
Q ss_pred EEeCCCCeEEEEeCCCC-ceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCCCCCCceEE
Q 016552 300 GIDENSCTLSRYDEVMD-DWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 300 ~~~~~~~~l~~yd~~~~-~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~ 366 (387)
+.....+.+.+||++.+ .|+.-.. . .........+|.+++++..+..++.+|+.++ .-.|+.
T Consensus 140 v~~~~~~~v~~~d~~G~~~w~~~~~--~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG--~~~w~~ 202 (276)
T 3no2_A 140 VPLFATSEVREIAPNGQLLNSVKLS--G-TPFSSAFLDNGDCLVACGDAHCFVQLNLESN--RIVRRV 202 (276)
T ss_dssp EEETTTTEEEEECTTSCEEEEEECS--S-CCCEEEECTTSCEEEECBTTSEEEEECTTTC--CEEEEE
T ss_pred EEecCCCEEEEECCCCCEEEEEECC--C-CccceeEcCCCCEEEEeCCCCeEEEEeCcCC--cEEEEe
Confidence 77766789999999854 3543222 1 1112233447889988877888999999843 146876
No 74
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.0035 Score=57.21 Aligned_cols=187 Identities=13% Similarity=0.103 Sum_probs=97.1
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCc-ceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+++.|+.+ ..+.+||..+.+-... +..... ....+. -+++.++.|+.+. .+.+||..+
T Consensus 43 ~~~~l~~~~~d-------g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~ 105 (369)
T 3zwl_B 43 EGDLLFSCSKD-------SSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSADY--------SIKLWDVSN 105 (369)
T ss_dssp TSCEEEEEESS-------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTT--------EEEEEETTT
T ss_pred CCCEEEEEeCC-------CEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCC
Confidence 45566666533 2578899877654331 221111 112222 2466667776544 788999988
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeC-----CeEEEEECCCCce----eecccccc---cCC----C
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTW----DDMREGMV---RGW----R 287 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~-----~~i~~yD~~~~~W----~~~~~~~~---~~~----~ 287 (387)
.+ -...-..+... ......-+++.++.+... ..+.+||..+..- ........ ... .
T Consensus 106 ~~----~~~~~~~~~~v----~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 106 GQ----CVATWKSPVPV----KRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp CC----EEEEEECSSCE----EEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred Cc----EEEEeecCCCe----EEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 77 44332222111 011222355655555544 5788888765531 11110000 000 1
Q ss_pred CcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccCC
Q 016552 288 GPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 288 ~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
..+++. .++++++.+..++.|.+||..++ ...+............+. -+++.+++++....+.+||+.+.
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNN-YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCC-cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence 112222 24556666667889999999873 122222222222222222 36778888777888999999864
No 75
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.65 E-value=0.015 Score=54.67 Aligned_cols=183 Identities=13% Similarity=0.064 Sum_probs=98.8
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+++.|+.++ .+.+||..+.+-.. .+........++. -++..++.|+.+. .+.+||..+
T Consensus 161 ~~~~l~sgs~D~-------~i~iwd~~~~~~~~--~~~~h~~~V~~v~~~p~~~~l~s~s~D~--------~i~~wd~~~ 223 (410)
T 1vyh_C 161 SGKLLASCSADM-------TIKLWDFQGFECIR--TMHGHDHNVSSVSIMPNGDHIVSASRDK--------TIKMWEVQT 223 (410)
T ss_dssp TSSEEEEEETTS-------CCCEEETTSSCEEE--CCCCCSSCEEEEEECSSSSEEEEEETTS--------EEEEEETTT
T ss_pred CCCEEEEEeCCC-------eEEEEeCCCCceeE--EEcCCCCCEEEEEEeCCCCEEEEEeCCC--------eEEEEECCC
Confidence 456777776433 46788887654322 2221111111222 2566677777654 788999988
Q ss_pred CccccCeEEcCCCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE--------
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-------- 293 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-------- 293 (387)
+. -...-.-... ....+. -+|.+++.++.+..+.+||..+......-..... ...+++.
T Consensus 224 ~~----~~~~~~~h~~-----~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~ 292 (410)
T 1vyh_C 224 GY----CVKTFTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRH--VVECISWAPESSYSS 292 (410)
T ss_dssp CC----EEEEEECCSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECCSCGGGG
T ss_pred Cc----EEEEEeCCCc-----cEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCc--eEEEEEEcCcccccc
Confidence 76 3321111111 012222 3567777777777899999887654321100000 0011111
Q ss_pred -------------eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceE--EEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 294 -------------DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 -------------~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
..+.+++.++.++.|..||..+.. .+..+........ ....+|+.++.|+....|.+||..+.
T Consensus 293 ~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp GGGCCSCC-------CCEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS
T ss_pred hhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 124566677778899999998763 2222222222222 22346777788788889999999754
No 76
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.64 E-value=0.0083 Score=53.67 Aligned_cols=187 Identities=13% Similarity=0.112 Sum_probs=102.5
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCc-ceeEEEe---CCEEEEEecCCCCCCCCCcceEEEEEC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAGCS---RGAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~ 221 (387)
+++.++.|+.+. .+.+||..+...+.+..+..... ..+.+.. ++++++.|+.+. .+.+||.
T Consensus 20 ~g~~las~s~D~-------~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~--------~v~iWd~ 84 (297)
T 2pm7_B 20 YGKRMATCSSDK-------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG--------KVMIWKE 84 (297)
T ss_dssp TSSEEEEEETTS-------CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT--------EEEEEEB
T ss_pred CCCEEEEEeCCC-------EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC--------EEEEEEc
Confidence 466667776432 57888887654433322322211 1122221 266777777654 7889999
Q ss_pred CCCccccCeEEcCCCCCCCccccceEEEEE--C--CEEEEEeeeCCeEEEEECCCCc-eeecccccccCCC--CcEEEEe
Q 016552 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVANT-WDDMREGMVRGWR--GPVAAMD 294 (387)
Q Consensus 222 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~--g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~~~~~~--~~~~~~~ 294 (387)
.++. |..+..+..... ...++.+ + |.+.+.++.+..+.+||..+.. +.... ..+.. ..+++..
T Consensus 85 ~~~~----~~~~~~~~~h~~---~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~---~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 85 ENGR----WSQIAVHAVHSA---SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPII---IDAHAIGVNSASWA 154 (297)
T ss_dssp SSSC----BCCCEEECCCSS---CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEE---EECCSSCEEEEEEC
T ss_pred CCCc----eEEEEEeecCCC---ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeee---eecccCccceEeec
Confidence 8887 765442221111 1223333 2 5666677767789999987652 32110 00111 1111111
Q ss_pred --------------CCeEEEEeCCCCeEEEEeCCCCc--eeEccccccccCceEEEEe--C---CeEEEEecCCCeEEEE
Q 016552 295 --------------EEVLYGIDENSCTLSRYDEVMDD--WKEVVKSDLLKGARHAAAG--G---GRVCAVCENGGGIVVV 353 (387)
Q Consensus 295 --------------~~~ly~~~~~~~~l~~yd~~~~~--W~~v~~~~~~~~~~~~~~~--~---g~i~v~gg~~~~i~~~ 353 (387)
++++++.++.++.|..||..+.. |..+..+.........+.. + +.+++.|+....+.++
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 24567777778899999986643 5554444433333333333 2 3677777778889999
Q ss_pred eccC
Q 016552 354 DVKA 357 (387)
Q Consensus 354 d~~~ 357 (387)
|+.+
T Consensus 235 d~~~ 238 (297)
T 2pm7_B 235 TQDN 238 (297)
T ss_dssp EESS
T ss_pred EeCC
Confidence 9875
No 77
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.59 E-value=0.0079 Score=56.67 Aligned_cols=185 Identities=11% Similarity=0.053 Sum_probs=99.8
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++.+++.|+.++ .+.+||..+.+-...-..............++++++.|+.+. .+.+||..+.+
T Consensus 119 ~~~~l~s~s~Dg-------~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~--------~i~iwd~~~~~ 183 (410)
T 1vyh_C 119 VFSVMVSASEDA-------TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM--------TIKLWDFQGFE 183 (410)
T ss_dssp SSSEEEEEESSS-------CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS--------CCCEEETTSSC
T ss_pred CCCEEEEEeCCC-------eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC--------eEEEEeCCCCc
Confidence 356677776432 588999888754331111111111111223567777777654 56788887655
Q ss_pred cccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEe
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGID 302 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~ 302 (387)
-... +.... ....++.+ ++...+.++.+..+.+||..++.-...-.... . ....+.. .++.+++.+
T Consensus 184 ----~~~~--~~~h~---~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~-~-~v~~~~~~~~g~~l~s~ 252 (410)
T 1vyh_C 184 ----CIRT--MHGHD---HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-E-WVRMVRPNQDGTLIASC 252 (410)
T ss_dssp ----EEEC--CCCCS---SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS-S-CEEEEEECTTSSEEEEE
T ss_pred ----eeEE--EcCCC---CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC-c-cEEEEEECCCCCEEEEE
Confidence 3221 21111 11223333 56666777777899999998875322111001 0 0112222 356777777
Q ss_pred CCCCeEEEEeCCCCceeEccccccccCceEEEE----------------------eCCeEEEEecCCCeEEEEeccCC
Q 016552 303 ENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA----------------------GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~----------------------~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+.++.+.+||..+..-...- ........++. ..|.+++.|+....|.+||+.+.
T Consensus 253 s~D~~v~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~ 328 (410)
T 1vyh_C 253 SNDQTVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328 (410)
T ss_dssp ETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT
T ss_pred cCCCeEEEEECCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC
Confidence 77889999999877544321 11111111111 12667788778888999998854
No 78
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.59 E-value=0.036 Score=52.19 Aligned_cols=184 Identities=10% Similarity=-0.068 Sum_probs=107.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCC----ceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICR----TWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~----~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~y 219 (387)
++.||+.-. ....++++++... ....+...... .-...++ .+++||++-.. ...++++
T Consensus 123 ~~~lywsD~-------~~~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~glavD~~~~~lY~~d~~--------~~~I~~~ 186 (400)
T 3p5b_L 123 SNRIYWSDL-------SQRMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSV--------LGTVSVA 186 (400)
T ss_dssp TTEEEEEET-------TTTEEEEEEC------CCCEEEECSSCS-CEEEEEEETTTTEEEEEETT--------TTEEEEE
T ss_pred cCceEEEec-------CCCeEEEEEcccCCCCCcceEEEeCCCC-CcccEEEEecCCceEEEECC--------CCeEEEE
Confidence 578988743 2246788887652 12222111111 1112233 37899998433 2378889
Q ss_pred ECCCCccccCeEEcCC--CCCCCccccceEEEE--ECCEEEEEeee-CCeEEEEECCCCceeecccccccCCCC-cEEEE
Q 016552 220 DLMNGEKNSRWEKTGE--LKDGRFSREAIDAVG--WKGKLCLVNVK-GAEGAVYDVVANTWDDMREGMVRGWRG-PVAAM 293 (387)
Q Consensus 220 d~~~~~~~~~W~~~~~--~p~~~~~~~~~~~~~--~~g~lyv~gg~-~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~ 293 (387)
|+.... -..+.. +..+ ...++ .+|.||+.... ...|+++|+....=..+.. ..... .++++
T Consensus 187 ~~~g~~----~~~l~~~~~~~P------~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~---~~l~~P~glav 253 (400)
T 3p5b_L 187 DTKGVK----RKTLFRENGSKP------RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---ENIQWPNGITL 253 (400)
T ss_dssp CTTTCS----EEEEEECSSCCE------EEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC---SSCSCEEEEEE
T ss_pred eCCCCc----eEEEEeCCCCCc------ceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE---CCCCceEEEEE
Confidence 887665 444431 2111 11222 36889988632 3679999987543222211 11111 23444
Q ss_pred e--CCeEEEEeCCCCeEEEEeCCCCceeEcccc-ccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 294 D--EEVLYGIDENSCTLSRYDEVMDDWKEVVKS-DLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~-~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
. +++||+.+.....|+++|.+...=+.+... .....+.+++..++.||+.-..+..|..+|..++
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 254 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSC
T ss_pred EeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCC
Confidence 4 789999998788999999987644444332 2345567777789999999877888999986544
No 79
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.58 E-value=0.0013 Score=60.83 Aligned_cols=184 Identities=8% Similarity=0.039 Sum_probs=99.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCc-ceeEEE-eC-CEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAGC-SR-GAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~-~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
++..++.|+.++ .+.+||..+++-... +..... ....+. .+ +.+++.++.+. .+.+||..
T Consensus 150 dg~~l~sgs~dg-------~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~~~~~~~s~~~dg--------~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKDF-------SVKVWDLSQKAVLKS--YNAHSSEVNCVAACPGKDTIFLSCGEDG--------RILLWDTR 212 (357)
T ss_dssp SSSEEEEEETTS-------CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTCSSCEEEEETTS--------CEEECCTT
T ss_pred CCCEEEEEeCCC-------eEEEEECCCCcEEEE--EcCCCCCEEEEEEccCCCceeeeeccCC--------ceEEEECC
Confidence 456666666432 578899988764332 221111 111222 23 34677776644 67888888
Q ss_pred CCccccCeEEcCCCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe--CCe
Q 016552 223 NGEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEV 297 (387)
Q Consensus 223 ~~~~~~~W~~~~~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ 297 (387)
+.+ -.......... ....++.+ ++.+++.++.+..+.+||+.+.+=...-. .......++++. +++
T Consensus 213 ~~~----~~~~~~~~~~~---~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~--~~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 213 KPK----PATRIDFCASD---TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA--VHSQNITGLAYSYHSSP 283 (357)
T ss_dssp SSS----CBCBCCCTTCC---SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC--CCSSCEEEEEECSSSSC
T ss_pred CCc----eeeeeeecccc---ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe--ccceeEEEEEEcCCCCC
Confidence 776 32222111111 11223333 35666677666789999988754211101 011112233332 345
Q ss_pred EEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEE---eCCeEEEEecCCCeEEEEeccCC
Q 016552 298 LYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA---GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 298 ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~---~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+++.++.++.|.+||.++.+-... . ........++ .++++++.++....|.+||+.+.
T Consensus 284 ~lasgs~D~~i~iwd~~~~~~~~~--~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFSEVFRD--L-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEE--C-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEEeCCCEEEEEECCCCcEeEE--C-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 556666788999999988754332 1 1222333333 36788888888888999998743
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.58 E-value=0.011 Score=60.70 Aligned_cols=188 Identities=9% Similarity=-0.066 Sum_probs=101.2
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++..+++|+.+ ..+.+||..+++....-.-........+..-+++..+.|+.+. .+.+||..++.
T Consensus 66 ~~~~l~~~~~d-------g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~~~~ 130 (814)
T 3mkq_A 66 RKNWIIVGSDD-------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDL--------TVKLWNWENNW 130 (814)
T ss_dssp GGTEEEEEETT-------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTS--------EEEEEEGGGTS
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCC--------EEEEEECCCCc
Confidence 45566666632 3689999988765432111111111112222555556665533 78899988762
Q ss_pred cccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe---CCeEEE
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD---EEVLYG 300 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~---~~~ly~ 300 (387)
. ....-.-.... ....+.. ++.+++.++.+..+.+||..+..-...-. .........++.. ++.+++
T Consensus 131 ~---~~~~~~~~~~~----v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 131 A---LEQTFEGHEHF----VMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp E---EEEEEECCSSC----EEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCCCEEEECCSTTCCEEE
T ss_pred e---EEEEEcCCCCc----EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEe-cCCCCCEEEEEEEECCCCCEEE
Confidence 0 22221111110 0222232 46677777766789999987654321111 0111112333432 567777
Q ss_pred EeCCCCeEEEEeCCCCceeEccccccccCce--EEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 301 IDENSCTLSRYDEVMDDWKEVVKSDLLKGAR--HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~--~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.++.++.+..||..+..-. .......... .....++.+++.|+..+.+.+||..+.
T Consensus 203 ~~~~dg~i~~~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKSCV--ATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp EECTTSEEEEEETTTTEEE--EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred EEeCCCEEEEEECCCCcEE--EEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 7777889999999876432 2222222222 223346778888777788999998854
No 81
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.56 E-value=0.013 Score=54.69 Aligned_cols=191 Identities=13% Similarity=0.102 Sum_probs=101.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceee-----CCCCCCCCc-ceeEEEe-CC-EEEEEecCCCCCCCCCcceEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF-----GPELVTPRR-WCAAGCS-RG-AVYVASGIGSQFSSDVAKSVE 217 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~-----l~~~p~~r~-~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~ 217 (387)
++.+++.|+.+ ..+.+||..++.... +..+..... ....+.. ++ .+++.|+.+. .+.
T Consensus 93 ~~~~l~s~s~d-------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg--------~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSED-------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN--------VIL 157 (402)
T ss_dssp CTTEEEEEETT-------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS--------CEE
T ss_pred CCCEEEEEeCC-------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC--------EEE
Confidence 56677777643 358889988775421 111111111 1112222 33 5777777644 688
Q ss_pred EEECCCCccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEE-Ee
Q 016552 218 KWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MD 294 (387)
Q Consensus 218 ~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~ 294 (387)
+||..+++ ....-..... .....++.+ ++.+++.++.+..+.+||+.+++-...-.....+.....++ ..
T Consensus 158 iwd~~~~~----~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (402)
T 2aq5_A 158 VWDVGTGA----AVLTLGPDVH---PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS 230 (402)
T ss_dssp EEETTTTE----EEEEECTTTC---CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS
T ss_pred EEECCCCC----ccEEEecCCC---CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC
Confidence 99998887 4432210000 011223333 67777777777789999998875432210011111122333 34
Q ss_pred CCeEEEEe---CCCCeEEEEeCCCCce-eEccccccccCceEE-EEeCCe-EEEEecCCCeEEEEeccCC
Q 016552 295 EEVLYGID---ENSCTLSRYDEVMDDW-KEVVKSDLLKGARHA-AAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~~~ly~~~---~~~~~l~~yd~~~~~W-~~v~~~~~~~~~~~~-~~~~g~-i~v~gg~~~~i~~~d~~~~ 358 (387)
++++++.+ ..++.+.+||..+..- ..............+ ..-+++ +++.|+..+.|.+||+.+.
T Consensus 231 ~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 231 EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred CCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 67777776 5678899999987532 111111111122222 233445 4456556788999999865
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.56 E-value=0.014 Score=54.51 Aligned_cols=184 Identities=7% Similarity=-0.014 Sum_probs=99.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++..++.|+.+ ..+.+||..+.+-... +........+...++++++.|+.+. .+.+||..+..
T Consensus 145 ~~~~l~~~~~d-------g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~ 207 (401)
T 4aez_A 145 DGSFLSVGLGN-------GLVDIYDVESQTKLRT--MAGHQARVGCLSWNRHVLSSGSRSG--------AIHHHDVRIAN 207 (401)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEE--ECCCSSCEEEEEEETTEEEEEETTS--------EEEEEETTSSS
T ss_pred CCCEEEEECCC-------CeEEEEECcCCeEEEE--ecCCCCceEEEEECCCEEEEEcCCC--------CEEEEecccCc
Confidence 45666666643 2588999887754331 1122222233344667777777644 78889987543
Q ss_pred cccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe--CCeEEEE
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGI 301 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ly~~ 301 (387)
.. -......... ..++.+ ++.+++.++.+..+.+||..+.+-...-. .......+++.. ++.+++.
T Consensus 208 ~~--~~~~~~~~~~------v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~p~~~~ll~~ 277 (401)
T 4aez_A 208 HQ--IGTLQGHSSE------VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT--NHNAAVKAVAWCPWQSNLLAT 277 (401)
T ss_dssp CE--EEEEECCSSC------EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC--CCSSCCCEEEECTTSTTEEEE
T ss_pred ce--eeEEcCCCCC------eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec--CCcceEEEEEECCCCCCEEEE
Confidence 10 1112111111 222322 67777777777789999998754321111 111112344443 4567777
Q ss_pred eC--CCCeEEEEeCCCCceeEccccccccCc-eEEEEeCCeEEEE--ecCCCeEEEEeccCC
Q 016552 302 DE--NSCTLSRYDEVMDDWKEVVKSDLLKGA-RHAAAGGGRVCAV--CENGGGIVVVDVKAA 358 (387)
Q Consensus 302 ~~--~~~~l~~yd~~~~~W~~v~~~~~~~~~-~~~~~~~g~i~v~--gg~~~~i~~~d~~~~ 358 (387)
++ .++.+..||..+..-..... ..... ......+++.+++ |...+.+.+||..+.
T Consensus 278 ~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 278 GGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp ECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred ecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 64 57899999998765433221 11111 2122235665555 335788999998864
No 83
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.55 E-value=0.028 Score=50.37 Aligned_cols=185 Identities=7% Similarity=-0.020 Sum_probs=98.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCC-cceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPR-RWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++..++.|+.+ ..+.+||..+++-.. .+.... ...+.+ .-++++++.|+.+. .+.+||..+
T Consensus 66 ~~~~l~s~s~d-------~~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~sgs~D~--------~v~lWd~~~ 128 (304)
T 2ynn_A 66 RKNWIIVGSDD-------FRIRVFNYNTGEKVV--DFEAHPDYIRSIAVHPTKPYVLSGSDDL--------TVKLWNWEN 128 (304)
T ss_dssp GGTEEEEEETT-------SEEEEEETTTCCEEE--EEECCSSCEEEEEECSSSSEEEEEETTS--------CEEEEEGGG
T ss_pred CCCEEEEECCC-------CEEEEEECCCCcEEE--EEeCCCCcEEEEEEcCCCCEEEEECCCC--------eEEEEECCC
Confidence 45566666633 357888988765322 111111 111222 22556677776654 778888876
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe---CCe
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD---EEV 297 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~---~~~ 297 (387)
+. .....+.... ....++.+ ++.+++.++.+..+.+||..+..=...-. .........+... ++.
T Consensus 129 ~~-----~~~~~~~~h~---~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~ 199 (304)
T 2ynn_A 129 NW-----ALEQTFEGHE---HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKP 199 (304)
T ss_dssp TT-----EEEEEECCCC---SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCC
T ss_pred Cc-----chhhhhcccC---CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCC
Confidence 62 2211111110 11223333 45667777777889999986543111000 0000011122221 455
Q ss_pred EEEEeCCCCeEEEEeCCCCceeEccccccccCceE--EEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 298 LYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 298 ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+++.++.++.|..||.++.. .+..+........ ....++.+++.|+....|.+||..+.
T Consensus 200 ~l~s~s~D~~i~iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 200 YMITASDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp EEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEcCCCeEEEEeCCCCc--cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 66677778899999998764 2223322222222 23345677888778888999998854
No 84
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.54 E-value=0.015 Score=54.97 Aligned_cols=206 Identities=9% Similarity=0.016 Sum_probs=110.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEE-EeCCE-EEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAG-CSRGA-VYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~-~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
+++.+++++... ....++++|..+++...+...+. .....+ .-+++ |++.+..+. ...++++|..+
T Consensus 189 dg~~la~~s~~~----~~~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~~ 256 (415)
T 2hqs_A 189 DGSKLAYVTFES----GRSALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLAS 256 (415)
T ss_dssp TSSEEEEEECTT----SSCEEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTS------SCEEEEEETTT
T ss_pred CCCEEEEEEecC----CCcEEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCC------CceEEEEECCC
Confidence 455555554322 22578999999988776544332 111222 22454 555544322 23689999998
Q ss_pred CccccCeEEcCCCCCCCccccceEEEE--ECCE-EEEEeeeC--CeEEEEECCCCceeecccccccCCCCcEEEE-eCCe
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVG--WKGK-LCLVNVKG--AEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEV 297 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~--~~g~-lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ 297 (387)
++ ...+...+.. ..... -||+ |++.+..+ ..++.+|+.+++-..+... +.....++. .+|+
T Consensus 257 ~~----~~~l~~~~~~------~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~---~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 257 GQ----IRQVTDGRSN------NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE---GSQNQDADVSSDGK 323 (415)
T ss_dssp CC----EEECCCCSSC------EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS---SSEEEEEEECTTSS
T ss_pred CC----EEeCcCCCCc------ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC---CCcccCeEECCCCC
Confidence 88 7666533211 22222 2666 44443322 4788889988765444321 111112232 2444
Q ss_pred -EEEEeCC--CCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecC-C--CeEEEEeccCCCCCCceEEeCCCC
Q 016552 298 -LYGIDEN--SCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCEN-G--GGIVVVDVKAAAAPTIFVVDTPLG 371 (387)
Q Consensus 298 -ly~~~~~--~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~-~--~~i~~~d~~~~~~~~~W~~~~p~~ 371 (387)
|++.... ...|+.||.++.....+.... ........-+|+.+++++. + ..++++|+.+. .-.......
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~----~~~~l~~~~ 397 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQVLSSTF--LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR----FKARLPATD 397 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEECCCSS--SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC----CEEECCCSS
T ss_pred EEEEEECcCCceEEEEEECCCCCEEEecCCC--CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC----cEEEeeCCC
Confidence 5444433 247999999998876654432 2223233456776666553 3 27899998855 333322222
Q ss_pred ceeEEEEEccC
Q 016552 372 FEALSVHIMPR 382 (387)
Q Consensus 372 ~~~~~~~~~~~ 382 (387)
-+...++.-|.
T Consensus 398 ~~v~~~~~~~~ 408 (415)
T 2hqs_A 398 GQVKFPAWSPY 408 (415)
T ss_dssp SEEEEEEECCC
T ss_pred CCCcCCccccc
Confidence 25666666554
No 85
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.54 E-value=0.0073 Score=55.77 Aligned_cols=175 Identities=11% Similarity=0.044 Sum_probs=88.3
Q ss_pred ccEEEeccCCceeeCCCCC---CCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCC
Q 016552 165 RPLIFDPICRTWTFGPELV---TPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p---~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~ 240 (387)
.+.+||..+++-....... ......+.+ .-+++.++.|+.+. .+.+||..+.+ -...-.....
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg--------~v~iwd~~~~~----~~~~~~~h~~- 182 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF--------SVKVWDLSQKA----VLKSYNAHSS- 182 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS--------CEEEEETTTTE----EEEEECCCSS-
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC--------eEEEEECCCCc----EEEEEcCCCC-
Confidence 5788888776533322211 111111222 23667777777654 67889998877 3322111111
Q ss_pred ccccceEEEEE--CC-EEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCC
Q 016552 241 FSREAIDAVGW--KG-KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSRYDEVM 315 (387)
Q Consensus 241 ~~~~~~~~~~~--~g-~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~~~ 315 (387)
...++.+ ++ .+++.++.+..+.+||+.+.+-..............+++.. ++.+++.+..++.|..||..+
T Consensus 183 ----~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 183 ----EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp ----CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC
T ss_pred ----CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC
Confidence 1222322 33 35666666678999999876543221111111111233332 456777777788999999876
Q ss_pred CceeEccccccccCceEEEE--eCC-eEEEEecCCCeEEEEeccCC
Q 016552 316 DDWKEVVKSDLLKGARHAAA--GGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 316 ~~W~~v~~~~~~~~~~~~~~--~~g-~i~v~gg~~~~i~~~d~~~~ 358 (387)
.+ .+..+.........++ .++ ++++.|+....|.+||..+.
T Consensus 259 ~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 259 PD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp GG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred Cc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 53 2222222222322333 244 56666677788999999865
No 86
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.53 E-value=0.0043 Score=56.08 Aligned_cols=185 Identities=12% Similarity=-0.044 Sum_probs=99.1
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.+|+..... ..+.+||+.+++....-..+.... ..+..-++ .+|+.+..+ ..+.+||..++
T Consensus 9 ~~~~~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~--------~~i~~~d~~~~ 72 (331)
T 3u4y_A 9 SNFGIVVEQHL-------RRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFC--------QTLVQIETQLE 72 (331)
T ss_dssp CCEEEEEEGGG-------TEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTT--------CEEEEEECSSS
T ss_pred CCEEEEEecCC-------CeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCC--------CeEEEEECCCC
Confidence 35677776532 368999999988765433332111 22222244 577776432 27899999988
Q ss_pred ccccCe-EEcCCCCCCCccccce-EEEEECCE-EEEEeeeC-C--eEEEEECCCCceeecccccccCCCCcEEEEe-CC-
Q 016552 225 EKNSRW-EKTGELKDGRFSREAI-DAVGWKGK-LCLVNVKG-A--EGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE- 296 (387)
Q Consensus 225 ~~~~~W-~~~~~~p~~~~~~~~~-~~~~~~g~-lyv~gg~~-~--~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~- 296 (387)
+ - ......... . .. .+..-+|+ +| .+... . .+.+||+.+++-...- +.+.....+++. +|
T Consensus 73 ~----~~~~~~~~~~~--~--~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~---~~~~~~~~~~~spdg~ 140 (331)
T 3u4y_A 73 P----PKVVAIQEGQS--S--MADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTI---PIPYDAVGIAISPNGN 140 (331)
T ss_dssp S----CEEEEEEECSS--C--CCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEE---ECCTTEEEEEECTTSS
T ss_pred c----eeEEecccCCC--C--ccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEE---ECCCCccceEECCCCC
Confidence 7 4 221111111 0 02 22333555 55 43333 3 8999999988654321 111111233332 34
Q ss_pred eEEEEeCCCCe-EEEEeCCCCce-eEcc--ccccccCceEE-EEeCCe-EEEEecCCCeEEEEeccCC
Q 016552 297 VLYGIDENSCT-LSRYDEVMDDW-KEVV--KSDLLKGARHA-AAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 297 ~ly~~~~~~~~-l~~yd~~~~~W-~~v~--~~~~~~~~~~~-~~~~g~-i~v~gg~~~~i~~~d~~~~ 358 (387)
.||+.+...+. +.+||.+.+.- .... ..+.......+ ..-+|+ +|+.+..++.+.+||+.+.
T Consensus 141 ~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 208 (331)
T 3u4y_A 141 GLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP 208 (331)
T ss_dssp CEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST
T ss_pred EEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 58888766567 88888765321 1111 11111122222 234565 7777667788999999865
No 87
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.52 E-value=0.015 Score=54.27 Aligned_cols=105 Identities=10% Similarity=-0.025 Sum_probs=62.4
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CCe-EEEEeCCCCeEEEEeCCCCce--eEccccccc
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEV-LYGIDENSCTLSRYDEVMDDW--KEVVKSDLL 327 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~~-ly~~~~~~~~l~~yd~~~~~W--~~v~~~~~~ 327 (387)
++++.+.++.+..+.+||+.+.+-...-. ........+++.. ++. +++.++.++.|.+||..+..- ..+... ..
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~-~~ 335 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLP-SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN-EG 335 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEEC-CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES-TT
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcc-cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc-CC
Confidence 66777777766789999998765321111 0001112233332 344 677777789999999987632 111110 11
Q ss_pred cCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 328 KGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 328 ~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
..-..+...++++++.++....+.+||+...
T Consensus 336 ~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 336 TPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp SCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred CCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 1123344557888888888889999998853
No 88
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.50 E-value=0.0069 Score=55.56 Aligned_cols=189 Identities=15% Similarity=0.196 Sum_probs=107.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCC--CCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV--TPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p--~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
++.+++.||.++ .+.+||..++.|.....+. ........+ .-+++.++.|+.+. .+.+||..
T Consensus 27 ~g~~las~~~D~-------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--------~v~iw~~~ 91 (345)
T 3fm0_A 27 AGTLLASCGGDR-------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--------TTCIWKKN 91 (345)
T ss_dssp TSSCEEEEETTS-------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEEC
T ss_pred CCCEEEEEcCCC-------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC--------cEEEEEcc
Confidence 456666666432 5788898888775422221 111111222 22567777777654 67788888
Q ss_pred CCccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCc-eeecccccccCCCCcEEEE-eCCeE
Q 016552 223 NGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANT-WDDMREGMVRGWRGPVAAM-DEEVL 298 (387)
Q Consensus 223 ~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~~~~~~~~~~~~-~~~~l 298 (387)
++. +..+..+..... ...++.+ ++++.+.++.+..+.++|..+.. +..+............++. .++.+
T Consensus 92 ~~~----~~~~~~~~~h~~---~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 92 QDD----FECVTTLEGHEN---EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp CC-----EEEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred CCC----eEEEEEccCCCC---CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 776 654433321111 1223332 57777777777789999987653 3222210000101122232 24566
Q ss_pred EEEeCCCCeEEEEeCCCCceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEecc
Q 016552 299 YGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 299 y~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~ 356 (387)
++.++.++.+..||.+++.|..+..+.........+. .+|+.++.|+....|.+||..
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 6777778899999999988876655444333332333 367778887777788888863
No 89
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.50 E-value=0.0098 Score=54.34 Aligned_cols=169 Identities=11% Similarity=0.030 Sum_probs=92.1
Q ss_pred ccEEEeccCCceeeCCCCCCCC-cceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc
Q 016552 165 RPLIFDPICRTWTFGPELVTPR-RWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
.+.+||..+.+-... +.... ...+.+ .-++++++.|+.+. .+.+||..+.. -...-.-...
T Consensus 165 ~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~--------~v~~wd~~~~~----~~~~~~~h~~--- 227 (340)
T 1got_B 165 TCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDA--------SAKLWDVREGM----CRQTFTGHES--- 227 (340)
T ss_dssp CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCS----EEEEECCCSS---
T ss_pred cEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCC--------cEEEEECCCCe----eEEEEcCCcC---
Confidence 578899888754331 11111 111122 23567788887654 78889988776 3221111111
Q ss_pred ccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCcee
Q 016552 243 REAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWK 319 (387)
Q Consensus 243 ~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~ 319 (387)
...++. -++.+++.++.+..+.+||..+++-...-..........+++. .++++++.+..++.+.+||..+..
T Consensus 228 --~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~-- 303 (340)
T 1got_B 228 --DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD-- 303 (340)
T ss_dssp --CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--
T ss_pred --CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc--
Confidence 122222 2677777777778899999987643211110000001122333 356777778788899999987653
Q ss_pred EccccccccCceEEE--EeCCeEEEEecCCCeEEEEe
Q 016552 320 EVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVD 354 (387)
Q Consensus 320 ~v~~~~~~~~~~~~~--~~~g~i~v~gg~~~~i~~~d 354 (387)
.+..+........++ ..+|+.++.|+....|.+||
T Consensus 304 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 333333333332223 33567777777777777775
No 90
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.50 E-value=0.011 Score=53.93 Aligned_cols=190 Identities=13% Similarity=0.083 Sum_probs=99.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++.+++.|+.+ ..+.+||..+..-...-+............-++++.+.||.+. .+.+||..+..
T Consensus 66 d~~~l~s~s~D-------g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~--------~v~iw~~~~~~ 130 (340)
T 1got_B 66 DSRLLLSASQD-------GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN--------ICSIYNLKTRE 130 (340)
T ss_dssp TSSEEEEEETT-------TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTC--------EEEEEETTTCS
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCC--------eEEEEECccCC
Confidence 35566666643 2578888776653321111111111112223567777777644 77889887754
Q ss_pred cccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEeCC
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDEN 304 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~ 304 (387)
.. ......+...... -.+....-+++ ++.++.+..+.+||+.+++-...-.... ....+++. .++.+++.++.
T Consensus 131 ~~--~~~~~~~~~h~~~-v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~sg~~ 204 (340)
T 1got_B 131 GN--VRVSRELAGHTGY-LSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHT--GDVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp BS--CEEEEEEECCSSC-EEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEEET
T ss_pred Cc--ceeEEEecCCCcc-EEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCC--CceEEEEECCCCCEEEEEeC
Confidence 11 2221111110000 00112233565 4455555789999998875432211000 01122333 25677777777
Q ss_pred CCeEEEEeCCCCceeEccccccccCceEEE--EeCCeEEEEecCCCeEEEEeccCC
Q 016552 305 SCTLSRYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 305 ~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++.+..||..+..-.. ...........+ ..+++.++.|+....+.+||+.+.
T Consensus 205 d~~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 205 DASAKLWDVREGMCRQ--TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp TSCEEEEETTTCSEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCcEEEEECCCCeeEE--EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 8999999998764322 222222222222 336788888888888999998754
No 91
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.48 E-value=0.002 Score=59.50 Aligned_cols=182 Identities=8% Similarity=0.057 Sum_probs=97.6
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCc-ceeEE-EeC-CEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAG-CSR-GAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~-~~~~~-~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
++..++.|+.++ .+.+||..+++-.. .+..... ....+ ..+ ..+++.|+.+. .+.+||..
T Consensus 138 dg~~l~sgs~d~-------~i~iwd~~~~~~~~--~~~~h~~~V~~~~~~~~~~~~l~s~s~D~--------~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSKDI-------CIKVWDLAQQVVLS--SYRAHAAQVTCVAASPHKDSVFLSCSEDN--------RILLWDTR 200 (344)
T ss_dssp TSSEEEEEETTS-------CEEEEETTTTEEEE--EECCCSSCEEEEEECSSCTTEEEEEETTS--------CEEEEETT
T ss_pred CCCEEEEEeCCC-------eEEEEECCCCcEEE--EEcCcCCceEEEEecCCCCCceeeecccc--------cccccccc
Confidence 556666666432 57889998875432 2221111 11122 223 35777777654 67899998
Q ss_pred CCccccCeEEcCCCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEECCCCceeecccccccCCC--CcEEEEe-CC
Q 016552 223 NGEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWR--GPVAAMD-EE 296 (387)
Q Consensus 223 ~~~~~~~W~~~~~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~--~~~~~~~-~~ 296 (387)
+.+ -...-....... ...++.. ++++++.++.+..+.+||..+++- +.. + .+.. ..++++. ++
T Consensus 201 ~~~----~~~~~~~~~~~~---~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~-~-~~h~~~v~~v~fsp~g 269 (344)
T 4gqb_B 201 CPK----PASQIGCSAPGY---LPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC--VLS-S-AVHSQCVTGLVFSPHS 269 (344)
T ss_dssp SSS----CEEECC----CC---CEEEEEECSSCTTEEEEEETTSEEEEEESCC--C--CEE-E-ECCSSCEEEEEECSSS
T ss_pred ccc----eeeeeecceeec---cceeeeecCCCCcceEEeccCCcEEEEECCCCcE--EEE-E-cCCCCCEEEEEEccCC
Confidence 877 332211111111 1222322 456777777777899999987642 111 1 1111 2234443 33
Q ss_pred -eEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEe--CC-eEEEEecCCCeEEEEeccCC
Q 016552 297 -VLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAG--GG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 297 -~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~--~g-~i~v~gg~~~~i~~~d~~~~ 358 (387)
++++.++.++.|.+||.++++-.. ..........++. +| .+++.++....|.++++.+.
T Consensus 270 ~~~lasgs~D~~i~vwd~~~~~~~~---~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 270 VPFLASLSEDCSLAVLDSSLSELFR---SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp SCCEEEEETTSCEEEECTTCCEEEE---ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CeEEEEEeCCCeEEEEECCCCcEEE---EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 556666678899999998874322 2222333333332 34 57767777888999988754
No 92
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.48 E-value=0.017 Score=51.80 Aligned_cols=184 Identities=8% Similarity=-0.034 Sum_probs=97.2
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++.+++.|+.+ ..+.+||..+..-...-..............++++++.|+.+. .+.+||..+++
T Consensus 24 ~~~~l~s~~~d-------g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~--------~i~vwd~~~~~ 88 (304)
T 2ynn_A 24 TEPWVLTTLYS-------GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGE 88 (304)
T ss_dssp SSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS--------EEEEEETTTCC
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC--------EEEEEECCCCc
Confidence 34556666643 2578888887654321111111111222233566777776644 78899998876
Q ss_pred cccCeE-EcCCCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCC--CcEEEEe--CCeE
Q 016552 226 KNSRWE-KTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWR--GPVAAMD--EEVL 298 (387)
Q Consensus 226 ~~~~W~-~~~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~--~~~~~~~--~~~l 298 (387)
-. .+...... ..++. -++.+.+.++.+..+.++|..++. ..... ..+.. ..+++.. ++.+
T Consensus 89 ----~~~~~~~h~~~------v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~--~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 89 ----KVVDFEAHPDY------IRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQT--FEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp ----EEEEEECCSSC------EEEEEECSSSSEEEEEETTSCEEEEEGGGTT-EEEEE--ECCCCSCEEEEEECTTCTTE
T ss_pred ----EEEEEeCCCCc------EEEEEEcCCCCEEEEECCCCeEEEEECCCCc-chhhh--hcccCCcEEEEEECCCCCCE
Confidence 22 12111111 22222 356666667766789999987652 11111 11111 2233443 4567
Q ss_pred EEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEe----CCeEEEEecCCCeEEEEeccCC
Q 016552 299 YGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAG----GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 299 y~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~----~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++.++.++.+..||..+..=..... .........+.. ++.+++.|+....|.+||+.+.
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT
T ss_pred EEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC
Confidence 7777778999999986542111100 011112222222 5567777777888999998854
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.48 E-value=0.0083 Score=61.54 Aligned_cols=188 Identities=9% Similarity=-0.042 Sum_probs=100.6
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCcc
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEK 226 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~ 226 (387)
+..+++|+.+ ..+.+||..+++....-...........-.-+++.+++|+.+. .+.+||..+++
T Consensus 25 ~~~la~~~~~-------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~~~~- 88 (814)
T 3mkq_A 25 EPWVLTTLYS-------GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGE- 88 (814)
T ss_dssp SSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS--------EEEEEETTTCC-
T ss_pred CCEEEEEeCC-------CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCc-
Confidence 4555555532 3578899887754432111111111222223566667766543 78999998887
Q ss_pred ccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCC-ceeecccccccCCCCcEEEEe--CCeEEEEeC
Q 016552 227 NSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN-TWDDMREGMVRGWRGPVAAMD--EEVLYGIDE 303 (387)
Q Consensus 227 ~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~-~W~~~~~~~~~~~~~~~~~~~--~~~ly~~~~ 303 (387)
....-.-...... ..+..-++...+.++.+..+.+||..++ .....-. .......+++.. ++.+++.++
T Consensus 89 ---~~~~~~~~~~~v~---~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 89 ---KVVDFEAHPDYIR---SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE--GHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp ---EEEEEECCSSCEE---EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE--CCSSCEEEEEEETTEEEEEEEEE
T ss_pred ---EEEEEecCCCCEE---EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc--CCCCcEEEEEEEcCCCCEEEEEe
Confidence 5432211111110 1122235666566666678999998776 2222111 111112233443 456777777
Q ss_pred CCCeEEEEeCCCCceeEccccccccC-ceEEEEe--CCeEEEEecCCCeEEEEeccCC
Q 016552 304 NSCTLSRYDEVMDDWKEVVKSDLLKG-ARHAAAG--GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 304 ~~~~l~~yd~~~~~W~~v~~~~~~~~-~~~~~~~--~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.++.|..||..+..-........... ....... ++..+++|+....+.+||..+.
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 78899999987654322211111111 2222223 7788888888889999998754
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.47 E-value=0.032 Score=53.01 Aligned_cols=150 Identities=10% Similarity=0.064 Sum_probs=82.9
Q ss_pred EECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 144 SLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 144 ~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
..++..++.|+.+ ..+.+||..+.+-...-..............+++.++.|+.+. .+.+||..+
T Consensus 277 ~~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg--------~i~vwd~~~ 341 (464)
T 3v7d_B 277 SGHGNIVVSGSYD-------NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT--------TIRIWDLEN 341 (464)
T ss_dssp EEETTEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS--------CEEEEETTT
T ss_pred cCCCCEEEEEeCC-------CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCC
Confidence 3445566666643 2588999887654321111111111222223556667776544 688999988
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeC
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDE 303 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~ 303 (387)
.+ -...-.-.. ....++..++...+.++.+..+.+||+.+..-..... ............++.+.+.++
T Consensus 342 ~~----~~~~~~~h~-----~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 342 GE----LMYTLQGHT-----ALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp TE----EEEEECCCS-----SCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEE
T ss_pred Cc----EEEEEeCCC-----CcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEec
Confidence 76 322211111 1134555677777777777789999998764221111 111112223344566666665
Q ss_pred CCCeEEEEeCCCCceeE
Q 016552 304 NSCTLSRYDEVMDDWKE 320 (387)
Q Consensus 304 ~~~~l~~yd~~~~~W~~ 320 (387)
++.+.+||.++++-..
T Consensus 411 -dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 411 -ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp -TTEEEEEETTTCCEEE
T ss_pred -CCeEEEEECCCCcEEe
Confidence 7899999999886544
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.46 E-value=0.0064 Score=56.31 Aligned_cols=185 Identities=8% Similarity=-0.060 Sum_probs=103.4
Q ss_pred EEEEEecccCCCCCCCCccEEEeccCCceeeCCCCC-CCCcceeEEEe--CCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 148 KLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV-TPRRWCAAGCS--RGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 148 ~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
.+++.|+.+ ..+.+||..+.+....-... ........+.. ++++++.|+.+. .+.+||..+.
T Consensus 87 ~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKG-------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG--------ATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBT-------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT--------EEEEEETTSC
T ss_pred CEEEEEcCC-------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC--------EEEEEECCCC
Confidence 355555533 25788898887766543322 12222222332 346777776544 7889999877
Q ss_pred ccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CCe-EEEEe
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEV-LYGID 302 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~~-ly~~~ 302 (387)
. ...+......... -...+..-++++.+.++.+..+.+||+....-..+.. . .....+++.. ++. +++.+
T Consensus 152 ~----~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-h--~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 152 V----IQVFAKTDSWDYW-YCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKL-H--KAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp E----EEEEECCCCSSCC-EEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEEC-S--SSCEEEEEECSSCTTEEEEE
T ss_pred c----eEEEeccCCCCCC-eEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEecc-C--CCcEEEEEECCCCCCEEEEE
Confidence 6 6655432211110 0022223366777777777899999986443333321 0 1112233332 344 77777
Q ss_pred CCCCeEEEEeCCC----CceeEccccccccCceEEEE--e-CCeEEEEecCCCeEEEEeccCC
Q 016552 303 ENSCTLSRYDEVM----DDWKEVVKSDLLKGARHAAA--G-GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~~l~~yd~~~----~~W~~v~~~~~~~~~~~~~~--~-~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+.++.+..||..+ ...... .. .......+. - +++.++.++..+.+.+||+.+.
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~--~~-~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 224 SVDATVKLWDLRNIKDKNSYIAE--MP-HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp ETTSEEEEEEGGGCCSTTCEEEE--EE-CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred eCCCEEEEEeCCCCCcccceEEE--ec-CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 7788999999987 322221 11 222222233 3 6788888888889999999864
No 96
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.44 E-value=0.0024 Score=58.93 Aligned_cols=190 Identities=12% Similarity=0.096 Sum_probs=99.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+++.|+.+ ..+.+||..++.|+.+..+........... -++++++.|+.+. .+.+||..+
T Consensus 22 ~g~~l~~~~~d-------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~--------~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTAT-------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR--------NAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSS-------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS--------SEEEC----
T ss_pred CCCEEEEecCC-------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC--------eEEEEEcCC
Confidence 45666666532 357899999998888776654333222222 2567777776544 677888776
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCc-eeecccccccCCC--CcEEEEe-CCe
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANT-WDDMREGMVRGWR--GPVAAMD-EEV 297 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~~~~~~--~~~~~~~-~~~ 297 (387)
.. .|.....+..... ...++.+ ++++.+.++.+..+.+||..+++ |..... +..... ..+++.. +++
T Consensus 87 ~~---~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 87 DG---TWKQTLVLLRLNR---AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKH-LKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp -----CCCCEEECCCCSS---CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEE-ECSSCCSCEEEEEECTTSS
T ss_pred CC---ceeeeeEecccCC---ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeE-eecccCCCeEEEEEcCCCC
Confidence 54 0322221111111 1222322 56666666666789999998775 543332 111111 2233332 556
Q ss_pred EEEEeCCCCeEEEEeCCCCceeE----------------ccccccccCceEEE--EeCCeEEEEecCCCeEEEEeccCC
Q 016552 298 LYGIDENSCTLSRYDEVMDDWKE----------------VVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 298 ly~~~~~~~~l~~yd~~~~~W~~----------------v~~~~~~~~~~~~~--~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+++.++.++.+..||.++..... +... ........+ ..+++.++.|+....|.+||+.+.
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 77777778899999986443221 1111 112222223 336778888777888999999865
No 97
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.43 E-value=0.013 Score=52.89 Aligned_cols=220 Identities=8% Similarity=-0.034 Sum_probs=111.9
Q ss_pred eEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEE-EECC-EEEEEecccCCCCCCCCccEEEeccCCce-
Q 016552 100 IHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLV-SLSG-KLILLAATTHNFNPALTRPLIFDPICRTW- 176 (387)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~-~~~~-~l~v~GG~~~~~~~~~~~~~vyd~~t~~W- 176 (387)
..+.++|+.+++.......+.. . ..++ .-++ .+|+.+.. ...++++|+.+++.
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~----------------~-~~~~~s~dg~~l~~~~~~-------~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYD----------------F-VDTAITSDCSNVVVTSDF-------CQTLVQIETQLEPPK 75 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCC----------------E-EEEEECSSSCEEEEEEST-------TCEEEEEECSSSSCE
T ss_pred CeEEEEeCcccceeeeEEccCC----------------c-ceEEEcCCCCEEEEEeCC-------CCeEEEEECCCCcee
Confidence 3678889988776543323221 0 1122 2244 46666542 13789999998874
Q ss_pred e-eCCCCCCCCcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCE
Q 016552 177 T-FGPELVTPRRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGK 254 (387)
Q Consensus 177 ~-~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~ 254 (387)
. .+.....+... .+..-++ .+| ++.... ....+.+||..+++ -...-+.... . ...+..-+|+
T Consensus 76 ~~~~~~~~~~~~~-~~~s~dg~~l~-~~~~~~-----~~~~i~v~d~~~~~----~~~~~~~~~~--~--~~~~~spdg~ 140 (331)
T 3u4y_A 76 VVAIQEGQSSMAD-VDITPDDQFAV-TVTGLN-----HPFNMQSYSFLKNK----FISTIPIPYD--A--VGIAISPNGN 140 (331)
T ss_dssp EEEEEECSSCCCC-EEECTTSSEEE-ECCCSS-----SSCEEEEEETTTTE----EEEEEECCTT--E--EEEEECTTSS
T ss_pred EEecccCCCCccc-eEECCCCCEEE-EecCCC-----CcccEEEEECCCCC----eEEEEECCCC--c--cceEECCCCC
Confidence 2 22222222211 1222234 566 332211 11378999998887 5443222211 1 1222223564
Q ss_pred -EEEEeeeCCe-EEEEECCCCce-eec-ccccccCCCCcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCce-eEccccccc
Q 016552 255 -LCLVNVKGAE-GAVYDVVANTW-DDM-REGMVRGWRGPVAAMD-EE-VLYGIDENSCTLSRYDEVMDDW-KEVVKSDLL 327 (387)
Q Consensus 255 -lyv~gg~~~~-i~~yD~~~~~W-~~~-~~~~~~~~~~~~~~~~-~~-~ly~~~~~~~~l~~yd~~~~~W-~~v~~~~~~ 327 (387)
+|+.+..... +.+||...+.- ... ......+.....+++. +| .||+.+...+.+.+||+++.+. ..+...+..
T Consensus 141 ~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 220 (331)
T 3u4y_A 141 GLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN 220 (331)
T ss_dssp CEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS
T ss_pred EEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC
Confidence 7777665556 88888765321 111 1101111111223332 44 5888877678999999988765 112222222
Q ss_pred cCc-eEEEEeCCe-EEEEecCCCeEEEEeccCC
Q 016552 328 KGA-RHAAAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 328 ~~~-~~~~~~~g~-i~v~gg~~~~i~~~d~~~~ 358 (387)
... .....-+|+ +|+.....+.+.++|..+.
T Consensus 221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp SCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred CCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 222 223344566 6666555677899998865
No 98
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.40 E-value=0.01 Score=54.47 Aligned_cols=230 Identities=16% Similarity=0.119 Sum_probs=112.0
Q ss_pred CCCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEECCE-EEEEecccCCCCCCCCcc--EEEeccC
Q 016552 97 STPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSLSGK-LILLAATTHNFNPALTRP--LIFDPIC 173 (387)
Q Consensus 97 ~~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-l~v~GG~~~~~~~~~~~~--~vyd~~t 173 (387)
+..+.++.+|+.++++..+..... .+|. +-+..-+++ ||+.... . .....+ |.+|..+
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~~--------~~p~-------~l~~spdg~~l~~~~~~-~---~~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAEV--------ANPS-------YLIPSADGKFVYSVNEF-S---KDQAAVSAFAFDKEK 86 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEEC--------SCCC-------SEEECTTSSEEEEEECC-S---STTCEEEEEEEETTT
T ss_pred CCCEEEEEEeCCCCCEEEeecccC--------CCCc-------eEEECCCCCEEEEEEcc-C---CCCCcEEEEEEeCCC
Confidence 456677888998887765543311 0011 122223344 6665442 1 012344 4556666
Q ss_pred CceeeCCCCCCCCc-ceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcC-------CCCCC-Ccccc
Q 016552 174 RTWTFGPELVTPRR-WCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG-------ELKDG-RFSRE 244 (387)
Q Consensus 174 ~~W~~l~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~-------~~p~~-~~~~~ 244 (387)
++.+.+...+..-. -+..+.-+..||+....+ ..+.+||..++.. ...+. .-+.+ +....
T Consensus 87 g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~--------~~v~~~~~~~~g~---~~~~~~~~~~~g~~~~~~~~~~~ 155 (361)
T 3scy_A 87 GTLHLLNTQKTMGADPCYLTTNGKNIVTANYSG--------GSITVFPIGQDGA---LLPASDVIEFKGSGPDKERQTMP 155 (361)
T ss_dssp TEEEEEEEEECSSSCEEEEEECSSEEEEEETTT--------TEEEEEEBCTTSC---BCSCSEEEECCCCCSCTTTCSSC
T ss_pred CcEEEeeEeccCCCCcEEEEECCCEEEEEECCC--------CEEEEEEeCCCCc---CcccceeEEccCCCCCccccCCC
Confidence 77777655442222 222233333567664322 3678888865431 11111 00100 00000
Q ss_pred ceEEEE--ECCE-EEEEeeeCCeEEEEECCCCce-------eec---c-cccccCCCCcEEEEe-CC-eEEEEeCCCCeE
Q 016552 245 AIDAVG--WKGK-LCLVNVKGAEGAVYDVVANTW-------DDM---R-EGMVRGWRGPVAAMD-EE-VLYGIDENSCTL 308 (387)
Q Consensus 245 ~~~~~~--~~g~-lyv~gg~~~~i~~yD~~~~~W-------~~~---~-~~~~~~~~~~~~~~~-~~-~ly~~~~~~~~l 308 (387)
....+. -+|+ +|+.+.....+.+||.....- ... . .....+.....+++. +| .||+.+...+.+
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 112233 3665 776654446788887765442 111 0 001111111233332 44 588877667889
Q ss_pred EEEeCCCCceeEcccccccc----CceEE-EEeCCe-EEEEecC-CCeEEEEecc
Q 016552 309 SRYDEVMDDWKEVVKSDLLK----GARHA-AAGGGR-VCAVCEN-GGGIVVVDVK 356 (387)
Q Consensus 309 ~~yd~~~~~W~~v~~~~~~~----~~~~~-~~~~g~-i~v~gg~-~~~i~~~d~~ 356 (387)
.+||.++++...+...+... ....+ ..-+|+ ||+.... .+.+.+||++
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 99999888776655432211 12222 334666 5555555 5778898886
No 99
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.39 E-value=0.0059 Score=55.39 Aligned_cols=189 Identities=12% Similarity=0.055 Sum_probs=103.5
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.||+.+... ..+++||+.+++.+.+....... ....+. -++++|+...... .....+.+||+.+.
T Consensus 55 ~g~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~-~~~i~~~~dg~l~v~~~~~~----~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 55 QGQLFLLDVFE-------GNIFKINPETKEIKRPFVSHKAN-PAAIKIHKDGRLFVCYLGDF----KSTGGIFAATENGD 122 (333)
T ss_dssp TSCEEEEETTT-------CEEEEECTTTCCEEEEEECSSSS-EEEEEECTTSCEEEEECTTS----SSCCEEEEECTTSC
T ss_pred CCCEEEEECCC-------CEEEEEeCCCCcEEEEeeCCCCC-cceEEECCCCcEEEEeCCCC----CCCceEEEEeCCCC
Confidence 56788876521 36899999998877643211111 122222 3678888754321 11246889999888
Q ss_pred ccccCeEEc-CCCCCCCccccceEEEE--ECCEEEEEeee------CCeEEEEECCCCceeecccccccCCCCcEEEEe-
Q 016552 225 EKNSRWEKT-GELKDGRFSREAIDAVG--WKGKLCLVNVK------GAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD- 294 (387)
Q Consensus 225 ~~~~~W~~~-~~~p~~~~~~~~~~~~~--~~g~lyv~gg~------~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~- 294 (387)
. -..+ ....... ....+. -+|++|+.... ...++.||+++++...+..... ....+++.
T Consensus 123 ~----~~~~~~~~~~~~----~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~i~~~~ 191 (333)
T 2dg1_A 123 N----LQDIIEDLSTAY----CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS---VANGIALST 191 (333)
T ss_dssp S----CEEEECSSSSCC----CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES---SEEEEEECT
T ss_pred E----EEEEEccCccCC----cccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC---cccceEECC
Confidence 7 5522 2111111 122223 36788886542 1468889988776655432111 11233332
Q ss_pred CC-eEEEEeCCCCeEEEEeCCC--CceeEcc-----ccccccCceEE-EEeCCeEEEEecCCCeEEEEeccC
Q 016552 295 EE-VLYGIDENSCTLSRYDEVM--DDWKEVV-----KSDLLKGARHA-AAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 295 ~~-~ly~~~~~~~~l~~yd~~~--~~W~~v~-----~~~~~~~~~~~-~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
++ .||+.+...+.|++||.++ .....+. ..+.......+ ..-+|++++....+..|.+||+..
T Consensus 192 dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 192 DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCC
Confidence 34 5888875567899999854 2333221 11111112222 233578888766667899998863
No 100
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.37 E-value=0.03 Score=49.78 Aligned_cols=200 Identities=10% Similarity=-0.008 Sum_probs=104.3
Q ss_pred EEECCEEEEEecccCCCCCCCCccEEEeccCC--ceeeCCCCCCCCcce-eEEEeCCEEEEEecCCCCCCCCCcceEEEE
Q 016552 143 VSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTPRRWC-AAGCSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 143 ~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~--~W~~l~~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 219 (387)
+..+|.+++.+. ..++.||+ ++ .|+.-.+ .....+ +....++++++...... ..+..+
T Consensus 44 ~~pdG~ilvs~~---------~~V~~~d~-~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~~-------~~v~~v 104 (276)
T 3no2_A 44 ATKAGEILFSYS---------KGAKMITR-DGRELWNIAAP--AGCEMQTARILPDGNALVAWCGHP-------STILEV 104 (276)
T ss_dssp ECTTSCEEEECB---------SEEEEECT-TSCEEEEEECC--TTCEEEEEEECTTSCEEEEEESTT-------EEEEEE
T ss_pred ECCCCCEEEeCC---------CCEEEECC-CCCEEEEEcCC--CCccccccEECCCCCEEEEecCCC-------CEEEEE
Confidence 334677777321 35889999 44 4654321 111122 23334677777654311 256777
Q ss_pred ECCCCccccCeEEcC--CCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCC-ceeecccccccCCCCcEEEEeCC
Q 016552 220 DLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN-TWDDMREGMVRGWRGPVAAMDEE 296 (387)
Q Consensus 220 d~~~~~~~~~W~~~~--~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~-~W~~~~~~~~~~~~~~~~~~~~~ 296 (387)
|+. ++.. |+... ..+.... .........+|.+++.......+.+||++-+ .|+.-.. .....+....+|
T Consensus 105 d~~-Gk~l--~~~~~~~~~~~~~~-~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~----~~~~~~~~~~~g 176 (276)
T 3no2_A 105 NMK-GEVL--SKTEFETGIERPHA-QFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLS----GTPFSSAFLDNG 176 (276)
T ss_dssp CTT-SCEE--EEEEECCSCSSGGG-SCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECS----SCCCEEEECTTS
T ss_pred eCC-CCEE--EEEeccCCCCcccc-cccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECC----CCccceeEcCCC
Confidence 873 3322 44321 1111100 0112234457777766555578999999832 4654322 111223344577
Q ss_pred eEEEEeCCCCeEEEEeCCCC--ceeEccc-ccc--ccCc-eEEEEeCCeEEEEecC----------CCeEEEEeccCCCC
Q 016552 297 VLYGIDENSCTLSRYDEVMD--DWKEVVK-SDL--LKGA-RHAAAGGGRVCAVCEN----------GGGIVVVDVKAAAA 360 (387)
Q Consensus 297 ~ly~~~~~~~~l~~yd~~~~--~W~~v~~-~~~--~~~~-~~~~~~~g~i~v~gg~----------~~~i~~~d~~~~~~ 360 (387)
.+++.+...+.|.++|++++ .|+.-.. .+. +... ......+|.+|+.... ...++.+|.+.+
T Consensus 177 ~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~-- 254 (276)
T 3no2_A 177 DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK-- 254 (276)
T ss_dssp CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB--
T ss_pred CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCC--
Confidence 88888776778999999965 3654321 221 1112 2233457889988631 234666655533
Q ss_pred CCceEEeCCCCc
Q 016552 361 PTIFVVDTPLGF 372 (387)
Q Consensus 361 ~~~W~~~~p~~~ 372 (387)
-.|+......|
T Consensus 255 -~~W~~~~~~~~ 265 (276)
T 3no2_A 255 -VVWQLNDKVKF 265 (276)
T ss_dssp -EEEEECCTTTS
T ss_pred -EEEEecCcccc
Confidence 46776555554
No 101
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.37 E-value=0.0082 Score=53.72 Aligned_cols=226 Identities=8% Similarity=0.021 Sum_probs=114.1
Q ss_pred EEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEE-EC-CEEEEEecccCCCCCCCCccEEEeccCCceee
Q 016552 101 HLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVS-LS-GKLILLAATTHNFNPALTRPLIFDPICRTWTF 178 (387)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~-~~-~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~ 178 (387)
.++.||+.++++..+.. +..... ......++. .+ +.||+.... ..+++||+. ++...
T Consensus 47 ~i~~~d~~~g~~~~~~~-~~~~~~-----------~~~~~~i~~~~~~g~l~v~~~~--------~~l~~~d~~-g~~~~ 105 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICK-PEVNGY-----------GGIPAGCQCDRDANQLFVADMR--------LGLLVVQTD-GTFEE 105 (314)
T ss_dssp EEEEECTTTCCEEEEEC-CEETTE-----------ECCEEEEEECSSSSEEEEEETT--------TEEEEEETT-SCEEE
T ss_pred EEEEEeCCCCcEEEEEe-cccCCC-----------CCCCceEEEecCCCcEEEEECC--------CCEEEEeCC-CCEEE
Confidence 57788888877765432 100000 000123333 24 678886541 258999998 77766
Q ss_pred C-CCCCCC----CcceeEEEeCCEEEEEecCCCC-------CCCCCcceEEEEECCCCccccCeEEcCC-CCCCCccccc
Q 016552 179 G-PELVTP----RRWCAAGCSRGAVYVASGIGSQ-------FSSDVAKSVEKWDLMNGEKNSRWEKTGE-LKDGRFSREA 245 (387)
Q Consensus 179 l-~~~p~~----r~~~~~~~~~~~iyv~GG~~~~-------~~~~~~~~v~~yd~~~~~~~~~W~~~~~-~p~~~~~~~~ 245 (387)
+ ...... .....+..-++++|+....... ........+..||+. .+ ...+.. +..+ .
T Consensus 106 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~----~~~~~~~~~~~-----~ 175 (314)
T 1pjx_A 106 IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ----MIQVDTAFQFP-----N 175 (314)
T ss_dssp CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC----EEEEEEEESSE-----E
T ss_pred EEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC----EEEeccCCCCc-----c
Confidence 5 332211 1122222236789987643210 001112467888876 55 544321 1111 1
Q ss_pred eEEEE----ECC-EEEEEeeeCCeEEEEECC-CCceeeccc--ccccCC-C-CcEEEE-eCCeEEEEeCCCCeEEEEeCC
Q 016552 246 IDAVG----WKG-KLCLVNVKGAEGAVYDVV-ANTWDDMRE--GMVRGW-R-GPVAAM-DEEVLYGIDENSCTLSRYDEV 314 (387)
Q Consensus 246 ~~~~~----~~g-~lyv~gg~~~~i~~yD~~-~~~W~~~~~--~~~~~~-~-~~~~~~-~~~~ly~~~~~~~~l~~yd~~ 314 (387)
..+.. -+| .+|+.......+.+||+. +++...... ..+... . ...+++ .+|.||+.....+.|.+||++
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 11222 345 577775545689999976 444322110 011110 1 112333 357899887556789999998
Q ss_pred CCceeEccccccccCceEEE-EeCCe-EEEEecCCCeEEEEeccCC
Q 016552 315 MDDWKEVVKSDLLKGARHAA-AGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 315 ~~~W~~v~~~~~~~~~~~~~-~~~g~-i~v~gg~~~~i~~~d~~~~ 358 (387)
+.+-......+. .....++ .-+|+ ||+....++.++.+|+...
T Consensus 256 ~g~~~~~~~~~~-~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 256 GGQPKMRIRCPF-EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CBSCSEEEECSS-SCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCcEeEEEeCCC-CCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 543322212221 1222222 23566 7777666788999998854
No 102
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.36 E-value=0.01 Score=55.12 Aligned_cols=143 Identities=11% Similarity=-0.028 Sum_probs=78.7
Q ss_pred CEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCce
Q 016552 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTW 275 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W 275 (387)
+..+++|+.+. .+.+||..+.+. -..+...... . ......-++++++.++.+..+.+||..+.+-
T Consensus 217 ~~~~~~~~~~g--------~i~~~d~~~~~~---~~~~~~~~~~-i---~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 217 DDKFVIPGPKG--------AIFVYQITEKTP---TGKLIGHHGP-I---SVLEFNDTNKLLLSASDDGTLRIWHGGNGNS 281 (425)
T ss_dssp TTEEEEECGGG--------CEEEEETTCSSC---SEEECCCSSC-E---EEEEEETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred CCEEEEEcCCC--------eEEEEEcCCCce---eeeeccCCCc-e---EEEEECCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 34455655433 688999987761 1112111111 1 0112223666666766667899999887643
Q ss_pred eecccccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEE--EEeCCeEEEEecCCCeEEE
Q 016552 276 DDMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHA--AAGGGRVCAVCENGGGIVV 352 (387)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~--~~~~g~i~v~gg~~~~i~~ 352 (387)
...-. .......+++.. ++ +++.++.++.+.+||..+.+-.. ........... ...+++++++++..+.+.+
T Consensus 282 ~~~~~--~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 356 (425)
T 1r5m_A 282 QNCFY--GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLA--LSIVDGVPIFAGRISQDGQKYAVAFMDGQVNV 356 (425)
T ss_dssp SEEEC--CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEE--EEECTTCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceEec--CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeE--ecccCCccEEEEEEcCCCCEEEEEECCCeEEE
Confidence 22111 011112233443 44 56666678899999998764322 22222222222 2335788888887888999
Q ss_pred EeccCC
Q 016552 353 VDVKAA 358 (387)
Q Consensus 353 ~d~~~~ 358 (387)
||+.+.
T Consensus 357 ~~~~~~ 362 (425)
T 1r5m_A 357 YDLKKL 362 (425)
T ss_dssp EECHHH
T ss_pred EECCCC
Confidence 999854
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.04 Score=48.78 Aligned_cols=187 Identities=9% Similarity=-0.039 Sum_probs=93.4
Q ss_pred ECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
.++..++.|+.+ ..+.+||..+..-...-.............-++++++.|+.+. .+.+||....
T Consensus 27 ~~~~~l~s~~~d-------g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------~i~~~~~~~~ 91 (313)
T 3odt_A 27 VDDSKVASVSRD-------GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT--------MINGVPLFAT 91 (313)
T ss_dssp EETTEEEEEETT-------SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS--------CEEEEETTCC
T ss_pred cCCCEEEEEEcC-------CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC--------eEEEEEeeec
Confidence 455566666643 3578899877654432221111112222233566777776644 5666776544
Q ss_pred ccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-e-CCeEEEEe
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-D-EEVLYGID 302 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~-~~~ly~~~ 302 (387)
.. ...+..+.... ....++..++.+.+.++.+..+.+||........... ......++. . ++.+++.+
T Consensus 92 ~~---~~~~~~~~~~~---~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 92 SG---EDPLYTLIGHQ---GNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAH----NASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp TT---SCC-CEECCCS---SCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECC----SSCEEEEEEEETTTTEEEEE
T ss_pred CC---CCcccchhhcc---cCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccC----CCceeEEEEccCCCCEEEEE
Confidence 20 11111111111 1133444467766777777789999933322221111 111112222 2 55666777
Q ss_pred CCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 303 ENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+.++.+..||.....- .+.......-......-+++ ++.|+....+.+||+.+.
T Consensus 162 ~~d~~i~i~d~~~~~~-~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 162 SADKTIKLWQNDKVIK-TFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp ETTSCEEEEETTEEEE-EECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred ECCCCEEEEecCceEE-EEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 6788999999432211 11110111112223344667 677777888999999854
No 104
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.021 Score=50.67 Aligned_cols=143 Identities=8% Similarity=-0.031 Sum_probs=76.7
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
++..++.|+.+. .+.+||..... ........... ......-++. ++.++.+..+.+||..+.+
T Consensus 154 ~~~~l~~~~~d~--------~i~i~d~~~~~-----~~~~~~~~~~i---~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 154 SENKFLTASADK--------TIKLWQNDKVI-----KTFSGIHNDVV---RHLAVVDDGH-FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp TTTEEEEEETTS--------CEEEEETTEEE-----EEECSSCSSCE---EEEEEEETTE-EEEEETTSEEEEEETTTCC
T ss_pred CCCEEEEEECCC--------CEEEEecCceE-----EEEeccCcccE---EEEEEcCCCe-EEEccCCCeEEEEECCchh
Confidence 566666666544 67788833222 22221111111 1223345777 5566666789999998764
Q ss_pred eeecccccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEE
Q 016552 275 WDDMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVV 353 (387)
Q Consensus 275 W~~~~~~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~ 353 (387)
-...-. .......+++.. +++ ++.++.++.+..||.++.+-......+...-.......+++ +++++..+.+.+|
T Consensus 217 ~~~~~~--~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw 292 (313)
T 3odt_A 217 VLRTYE--GHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIF 292 (313)
T ss_dssp EEEEEE--CCSSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEE
T ss_pred hhhhhh--cCCceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEE
Confidence 221111 011112233343 444 45555688999999988764443322211111222334566 5567778889999
Q ss_pred eccCC
Q 016552 354 DVKAA 358 (387)
Q Consensus 354 d~~~~ 358 (387)
|+.+.
T Consensus 293 ~~~~~ 297 (313)
T 3odt_A 293 SQEKS 297 (313)
T ss_dssp ESCGG
T ss_pred eCCCC
Confidence 99975
No 105
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.35 E-value=0.084 Score=54.22 Aligned_cols=183 Identities=11% Similarity=0.006 Sum_probs=107.7
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCC----ceeeC-C-CCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICR----TWTFG-P-ELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~----~W~~l-~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 219 (387)
++.||+.-.. ...++++++... ....+ . .+..|. ..+.-..+++||+.-.. ...|+++
T Consensus 435 ~~~lY~sD~~-------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~-GLAvD~~~~~LY~tD~~--------~~~I~v~ 498 (791)
T 3m0c_C 435 SNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSV--------LGTVSVA 498 (791)
T ss_dssp TTEEEEEETT-------TTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETT--------TTEEEEE
T ss_pred CCeeEEeecc-------ceeEEEEeccCCCCCcceeEEEecCCCCcc-eeeeeecCCcEEEEecC--------CCeEEEE
Confidence 5678887432 245677776542 22222 1 122222 11111236799998432 3478999
Q ss_pred ECCCCccccCeEEcC--CCCCCCccccceEEEEE---CCEEEEEeeeC-CeEEEEECCCCceeecccccccCCCCc-EEE
Q 016552 220 DLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGW---KGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRGP-VAA 292 (387)
Q Consensus 220 d~~~~~~~~~W~~~~--~~p~~~~~~~~~~~~~~---~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~ 292 (387)
|+.... -..+. .+..+ ..+++ +|.||+..... ..|+++++....=..+.. .....+ +++
T Consensus 499 ~ldG~~----~~~l~~~~l~~P-------~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~---~~l~~P~GLa 564 (791)
T 3m0c_C 499 DTKGVK----RKTLFRENGSKP-------RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---ENIQWPNGIT 564 (791)
T ss_dssp ETTSSS----EEEEEECTTCCE-------EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC---SSCSCEEEEE
T ss_pred eCCCCe----EEEEEeCCCCCc-------ceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe---CCCCCceEEE
Confidence 987665 44443 22211 23333 58899986332 679999987654333321 111122 344
Q ss_pred Ee--CCeEEEEeCCCCeEEEEeCCCCceeEcccc-ccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 293 MD--EEVLYGIDENSCTLSRYDEVMDDWKEVVKS-DLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 293 ~~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~-~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+. +++||+.+.....|.++|++...=..+... .....+++++..+++||+.-..+..|..+|..++
T Consensus 565 vD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 565 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 43 789999998778999999987644444322 2345567788889999999778889999986644
No 106
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.31 E-value=0.017 Score=52.34 Aligned_cols=176 Identities=11% Similarity=0.057 Sum_probs=94.9
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEe-C---CEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCC
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCS-R---GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~ 239 (387)
..+.+||..+++..............+.+.. + +++++.|+.+. .+.+||..+.... -..+......
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg--------~i~iwd~~~~~~~--~~~~~~~~~~ 113 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG--------NLHIWNLEAPEMP--VYSVKGHKEI 113 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS--------CEEEECTTSCSSC--SEEECCCSSC
T ss_pred cEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC--------eEEEEeCCCCCcc--EEEEEecccc
Confidence 4688899988876543322222222222222 2 46667776544 6788888766411 2222211111
Q ss_pred CccccceEEE--------EECCEEEEEeeeCCeEEEEECCCCc--eeeccccccc-CCCCcEEEE-----eCCeEEEEeC
Q 016552 240 RFSREAIDAV--------GWKGKLCLVNVKGAEGAVYDVVANT--WDDMREGMVR-GWRGPVAAM-----DEEVLYGIDE 303 (387)
Q Consensus 240 ~~~~~~~~~~--------~~~g~lyv~gg~~~~i~~yD~~~~~--W~~~~~~~~~-~~~~~~~~~-----~~~~ly~~~~ 303 (387)
..++ .-++.+.+.++.+..+.+||+.+.. ...+...... .....+++. .++.+++.+.
T Consensus 114 ------v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 114 ------INAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp ------EEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred ------eEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc
Confidence 1111 1256666666666789999998765 2222211110 101112221 3567777777
Q ss_pred CCCeEEEEeCCCCceeEccccccccCc-eEEEEe----CCeEEEEecCCCeEEEEeccCC
Q 016552 304 NSCTLSRYDEVMDDWKEVVKSDLLKGA-RHAAAG----GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 304 ~~~~l~~yd~~~~~W~~v~~~~~~~~~-~~~~~~----~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.++.+..||.++..-..... .... .++... ++..+++|+..+.+.+||+.+.
T Consensus 188 ~d~~i~i~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 188 DNGDIKLFDLRNMALRWETN---IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp TTSEEEEEETTTTEEEEEEE---CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred cCCeEEEEECccCceeeecC---CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 78899999998875322211 1222 222222 6778888888888999998754
No 107
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.29 E-value=0.038 Score=51.28 Aligned_cols=146 Identities=12% Similarity=0.090 Sum_probs=83.8
Q ss_pred CEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcC--CCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEEC
Q 016552 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~--~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~ 270 (387)
+..++.|+.+. .+.+||..+++ -...- ..+.... ....++.+ ++.+++.++.+..+.+||+
T Consensus 170 ~~~l~s~s~D~--------~i~~wd~~~~~----~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~ 235 (380)
T 3iz6_a 170 ETRLITGSGDQ--------TCVLWDVTTGQ----RISIFGSEFPSGHT--ADVLSLSINSLNANMFISGSCDTTVRLWDL 235 (380)
T ss_dssp SSCEEEECTTS--------CEEEECTTTCC----EEEEECCCSSSSCC--SCEEEEEECSSSCCEEEEEETTSCEEEEET
T ss_pred CCEEEEECCCC--------cEEEEEcCCCc----EEEEeecccCCCCc--cCeEEEEeecCCCCEEEEEECCCeEEEEEC
Confidence 34455555443 78889998887 43322 1111111 11223333 5677777877788999998
Q ss_pred CCCc--eeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccc-----c--CceEEEEeCCeE
Q 016552 271 VANT--WDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLL-----K--GARHAAAGGGRV 340 (387)
Q Consensus 271 ~~~~--W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~-----~--~~~~~~~~~g~i 340 (387)
.... -..+.. ......+++. .++..++.++.++.+..||..++.-..+-..... . -...+...+|++
T Consensus 236 ~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 236 RITSRAVRTYHG---HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL 312 (380)
T ss_dssp TTTCCCCEEECC---CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE
T ss_pred CCCCcceEEECC---cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE
Confidence 6321 111111 0111223343 3567777777889999999988754332221110 1 123344557888
Q ss_pred EEEecCCCeEEEEeccCC
Q 016552 341 CAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 341 ~v~gg~~~~i~~~d~~~~ 358 (387)
++.|+.++.+.+||....
T Consensus 313 l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 313 LFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp EEEECTTSCEEEEETTTC
T ss_pred EEEEECCCCEEEEECCCC
Confidence 889888889999998754
No 108
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.29 E-value=0.019 Score=52.78 Aligned_cols=169 Identities=12% Similarity=0.092 Sum_probs=91.8
Q ss_pred ccEEEeccCCceeeCCCCCCCCc-ceeEEE-e--CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCC
Q 016552 165 RPLIFDPICRTWTFGPELVTPRR-WCAAGC-S--RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~-~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~ 240 (387)
.+.+||..+.+-... +..... ..+... . ++++++.|+.+. .+.+||..+.+ ....-.....
T Consensus 177 ~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg--------~v~~wd~~~~~----~~~~~~~h~~- 241 (354)
T 2pbi_B 177 TCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCDK--------KAMVWDMRSGQ----CVQAFETHES- 241 (354)
T ss_dssp EEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETTS--------CEEEEETTTCC----EEEEECCCSS-
T ss_pred cEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCCC--------eEEEEECCCCc----EEEEecCCCC-
Confidence 578889887754321 111111 111111 1 356777777654 78899998887 4432211111
Q ss_pred ccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCc
Q 016552 241 FSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDD 317 (387)
Q Consensus 241 ~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~ 317 (387)
...++.+ ++.+++.++.+..+.+||+.++.-...-..........+++. .++.+++.+..++.+.+||..+..
T Consensus 242 ----~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 242 ----DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp ----CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred ----CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 1223333 567777777778899999987643221110010111122333 356777777778899999987653
Q ss_pred eeEccccccccCceEE--EEeCCeEEEEecCCCeEEEEe
Q 016552 318 WKEVVKSDLLKGARHA--AAGGGRVCAVCENGGGIVVVD 354 (387)
Q Consensus 318 W~~v~~~~~~~~~~~~--~~~~g~i~v~gg~~~~i~~~d 354 (387)
.+..+......... ...+|+.++.|+....+.+||
T Consensus 318 --~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 318 --RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp --EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred --eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 22222222333222 234677777777777777764
No 109
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.038 Score=51.21 Aligned_cols=186 Identities=12% Similarity=0.011 Sum_probs=94.5
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.+++.|+.+ ..+.+||.....-..+.... ......+. -+++.++.++.+. .+.+||..+.
T Consensus 119 ~~~~l~~~~~d-------g~i~i~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~--------~i~iwd~~~~ 181 (425)
T 1r5m_A 119 DGNSIVTGVEN-------GELRLWNKTGALLNVLNFHR--APIVSVKWNKDGTHIISMDVEN--------VTILWNVISG 181 (425)
T ss_dssp TSSEEEEEETT-------SCEEEEETTSCEEEEECCCC--SCEEEEEECTTSSEEEEEETTC--------CEEEEETTTT
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeeeccCCC--ccEEEEEECCCCCEEEEEecCC--------eEEEEECCCC
Confidence 45666666643 25788884444433333211 11112222 2456666665543 6788888877
Q ss_pred ccccCeEEcCCCCCCCcc------------ccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEE
Q 016552 225 EKNSRWEKTGELKDGRFS------------REAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA 292 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~------------~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~ 292 (387)
+ -...-..+..... .-......-++. ++.++....+.+||..+++-...-. .......+++
T Consensus 182 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~d~~~~~~~~~~~--~~~~~i~~~~ 254 (425)
T 1r5m_A 182 T----VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPKGAIFVYQITEKTPTGKLI--GHHGPISVLE 254 (425)
T ss_dssp E----EEEEECCC---------------CCCBSCCEEEETTE-EEEECGGGCEEEEETTCSSCSEEEC--CCSSCEEEEE
T ss_pred c----EEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCCCeEEEEEcCCCceeeeec--cCCCceEEEE
Confidence 6 4332222211100 001222233555 4555555689999998764321111 0111112333
Q ss_pred E-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCc-eEEEEe-CCeEEEEecCCCeEEEEeccCC
Q 016552 293 M-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGA-RHAAAG-GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 293 ~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~-~~~~~~-~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
. .++.+++.++.++.+.+||..+..-... ....... ..+... ++ .++.++....+.+||+.+.
T Consensus 255 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 255 FNDTNKLLLSASDDGTLRIWHGGNGNSQNC--FYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp EETTTTEEEEEETTSCEEEECSSSBSCSEE--ECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCccceE--ecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC
Confidence 3 2556666776788999999887543221 1112222 223333 45 7777777888999999754
No 110
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.29 E-value=0.0055 Score=55.96 Aligned_cols=181 Identities=13% Similarity=0.074 Sum_probs=97.5
Q ss_pred cEEEeccCCceeeCCCCCC-CCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcccc
Q 016552 166 PLIFDPICRTWTFGPELVT-PRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSRE 244 (387)
Q Consensus 166 ~~vyd~~t~~W~~l~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~ 244 (387)
++.+|+.++++..+..... ......+..-+++||+.+.... ...+.+||..+++ ++.+......... .
T Consensus 20 v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~------~~~v~~~~~~~g~----~~~~~~~~~~~~~-p 88 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD------EGGIAAWQIDGQT----AHKLNTVVAPGTP-P 88 (347)
T ss_dssp EEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT------EEEEEEEEEETTE----EEEEEEEEEESCC-C
T ss_pred EEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC------CceEEEEEecCCc----EEEeeeeecCCCC-C
Confidence 5677888888876432221 1112222233678888764311 2378899998877 7665532111111 1
Q ss_pred ceEEEEECCE-EEEEeeeCCeEEEEECC-CCceeecccccccCC---------CCcEEEE-eCCeEEEEeCCCCeEEEEe
Q 016552 245 AIDAVGWKGK-LCLVNVKGAEGAVYDVV-ANTWDDMREGMVRGW---------RGPVAAM-DEEVLYGIDENSCTLSRYD 312 (387)
Q Consensus 245 ~~~~~~~~g~-lyv~gg~~~~i~~yD~~-~~~W~~~~~~~~~~~---------~~~~~~~-~~~~ly~~~~~~~~l~~yd 312 (387)
...+..-+|+ ||+.+.....+.+||+. .++...+......+. ....+++ .+|++|+.+...+.+.+||
T Consensus 89 ~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp SEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 1223344565 66665444678899985 334433322111000 0112333 3567888877678899999
Q ss_pred CC-CCceeEcccccccc--Cc-eEEEEeCCe-EEEEecCCCeEEEEeccC
Q 016552 313 EV-MDDWKEVVKSDLLK--GA-RHAAAGGGR-VCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 313 ~~-~~~W~~v~~~~~~~--~~-~~~~~~~g~-i~v~gg~~~~i~~~d~~~ 357 (387)
.+ +++...+....... .. .....-+|+ +|+.+..+..+.+||...
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 88 55555443221111 12 223344666 777766778888888774
No 111
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.28 E-value=0.0078 Score=54.42 Aligned_cols=190 Identities=15% Similarity=0.193 Sum_probs=103.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCc-ceeEEEe---CCEEEEEecCCCCCCCCCcceEEEEEC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAGCS---RGAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~ 221 (387)
++..++.|+.+ ..+.+||..++....+..+..... ....+.. ++++++.|+.+. .+.+||.
T Consensus 24 ~g~~lasgs~D-------~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~--------~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD-------RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR--------KVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT-------TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS--------CEEEECC
T ss_pred CCCEEEEEeCC-------CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC--------EEEEEEC
Confidence 45666666643 357888887765433333322221 1222221 256777777654 7889999
Q ss_pred CCCccccCeEEcCCCCCCCccccceEEEEE--C--CEEEEEeeeCCeEEEEECCCC-ceeecccccccCCCCcEEEEe--
Q 016552 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVAN-TWDDMREGMVRGWRGPVAAMD-- 294 (387)
Q Consensus 222 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~--g~lyv~gg~~~~i~~yD~~~~-~W~~~~~~~~~~~~~~~~~~~-- 294 (387)
.+.. |..+..+...... ..++.+ + +.+.+.++.+..+.++|..+. .|..............+++..
T Consensus 89 ~~~~----~~~~~~~~~h~~~---V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 89 ENGT----WEKSHEHAGHDSS---VNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp SSSC----CCEEEEECCCSSC---CCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred CCCc----ceEEEEccCCCCc---eEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 8887 7654322211111 122222 3 566666666678899998875 574322100000000111110
Q ss_pred ----------------CCeEEEEeCCCCeEEEEeCCC-CceeEccccccccCceEEEEe--C----CeEEEEecCCCeEE
Q 016552 295 ----------------EEVLYGIDENSCTLSRYDEVM-DDWKEVVKSDLLKGARHAAAG--G----GRVCAVCENGGGIV 351 (387)
Q Consensus 295 ----------------~~~ly~~~~~~~~l~~yd~~~-~~W~~v~~~~~~~~~~~~~~~--~----g~i~v~gg~~~~i~ 351 (387)
.+++++.++.++.|..||.++ ..|..+..+.........+.. + +++++.|+....|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 134566666778899999874 467766655444433333333 2 26777777778888
Q ss_pred EEeccC
Q 016552 352 VVDVKA 357 (387)
Q Consensus 352 ~~d~~~ 357 (387)
+||+..
T Consensus 242 iw~~~~ 247 (316)
T 3bg1_A 242 IWTCDD 247 (316)
T ss_dssp EEECSS
T ss_pred EEEccC
Confidence 998764
No 112
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.27 E-value=0.022 Score=51.31 Aligned_cols=190 Identities=12% Similarity=-0.005 Sum_probs=103.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.||+.-.. ...++++|+.++. ......+ ..-+..+. -++++||+..... ...+..||..++
T Consensus 42 ~g~lyv~d~~-------~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~------~~~v~~~d~~~g 105 (306)
T 2p4o_A 42 DGTIFVTNHE-------VGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD------SIPVVSLVKSDG 105 (306)
T ss_dssp TSCEEEEETT-------TTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT------SCEEEEEECTTS
T ss_pred CCCEEEEeCC-------CCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC------cceEEEEcCCCC
Confidence 5678887431 2468999987653 2211111 11122222 3678998753321 125778898888
Q ss_pred ccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCC---ceeeccc----ccccCCCC-cEEEEeCC
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN---TWDDMRE----GMVRGWRG-PVAAMDEE 296 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~---~W~~~~~----~~~~~~~~-~~~~~~~~ 296 (387)
+ ...+...+..++. ...+...++.+|+.......++++|+.++ .|..-.. ........ ..+...++
T Consensus 106 ~----~~~~~~~~~~~~~--~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~ 179 (306)
T 2p4o_A 106 T----VETLLTLPDAIFL--NGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGN 179 (306)
T ss_dssp C----EEEEEECTTCSCE--EEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETT
T ss_pred e----EEEEEeCCCcccc--CcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCC
Confidence 8 7766655443322 11122335677877543468999998764 2311110 00111111 22344566
Q ss_pred eEEEEeCCCCeEEEEeCCC-CceeEccccccccCc-eEEEEeCCeEEEEecCCCeEEEEeccC
Q 016552 297 VLYGIDENSCTLSRYDEVM-DDWKEVVKSDLLKGA-RHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 297 ~ly~~~~~~~~l~~yd~~~-~~W~~v~~~~~~~~~-~~~~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
.||+.+...+.|++||.+. .+............+ ..++.-+|+||+....++.|.++|+..
T Consensus 180 ~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G 242 (306)
T 2p4o_A 180 FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR 242 (306)
T ss_dssp EEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred EEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCCC
Confidence 8999987778999999875 222111111111112 223344688988877778899998763
No 113
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.013 Score=53.37 Aligned_cols=189 Identities=13% Similarity=0.100 Sum_probs=99.2
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccC--CceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEEC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPIC--RTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t--~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 221 (387)
++..++.|+.+ ..+.+||..+ ..++.+..+........... -++.+++.|+.+. .+.+||.
T Consensus 118 ~g~~las~s~D-------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~--------~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRD-------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD--------TVRIWKD 182 (330)
T ss_dssp TSCEEEEEETT-------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEeCC-------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC--------eEEEEEC
Confidence 45566666543 2578888743 23433322222221112222 2566777777654 6788888
Q ss_pred CCCccccCeEEcCCCCCCCccccceEEEEE--C--CEEEEEeeeCCeEEEEECCCC------ceeecccccccCC--CCc
Q 016552 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVAN------TWDDMREGMVRGW--RGP 289 (387)
Q Consensus 222 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~--g~lyv~gg~~~~i~~yD~~~~------~W~~~~~~~~~~~--~~~ 289 (387)
.++. |..+..+..... ...++.+ + +...+.++.+..+.++|..+. .|..... +.... ...
T Consensus 183 ~~~~----~~~~~~~~~h~~---~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~-~~~~h~~~v~ 254 (330)
T 2hes_X 183 YDDD----WECVAVLNGHEG---TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI-LPDVHKRQVY 254 (330)
T ss_dssp ETTE----EEEEEEECCCSS---CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE-CCSCCSSCEE
T ss_pred CCCC----eeEEEEccCCCC---cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeee-cccccccceE
Confidence 8777 765543322111 1222222 2 334455555567888876543 3443322 11111 122
Q ss_pred EEEEeCCeEEEEeCCCCeEEEEeCCCCceeEccccc-cccC-ceEEEEe----CCeEEEEecCCCeEEEEeccC
Q 016552 290 VAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSD-LLKG-ARHAAAG----GGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 290 ~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~-~~~~-~~~~~~~----~g~i~v~gg~~~~i~~~d~~~ 357 (387)
+++...+.+++.++.++.|.+||..++.|..+.... .... ....+.. ++++++.|+....|.+||+.+
T Consensus 255 ~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 255 NVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 334444445566667889999999988887654321 1221 2222322 567888888888899999874
No 114
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.25 E-value=0.0075 Score=57.23 Aligned_cols=189 Identities=8% Similarity=-0.052 Sum_probs=101.6
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCC-CCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV-TPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p-~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
+.+++.|+.++ .+.+||..++.-..+-.+. ......+.+. .++.+++.|+.+. .+.+||..+
T Consensus 132 ~~~lasGs~dg-------~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~--------~v~iwd~~~ 196 (435)
T 4e54_B 132 PSTVAVGSKGG-------DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG--------TTRLQDFKG 196 (435)
T ss_dssp TTCEEEEETTS-------CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS--------CEEEEETTS
T ss_pred CCEEEEEeCCC-------EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC--------EEEEeeccC
Confidence 34566666433 5788888776543322221 1112222222 2566777776654 678899988
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe--CCeEEEE
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGI 301 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ly~~ 301 (387)
+. -..+......... -......-++++.+.++.+..+.++|.....-..+.. . .....++++. ++.+++.
T Consensus 197 ~~----~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~-h--~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 197 NI----LRVFASSDTINIW-FCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRM-H--KKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp CE----EEEEECCSSCSCC-CCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBC-C--SSCEEEEEECTTCSSEEEE
T ss_pred Cc----eeEEeccCCCCcc-EEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEec-c--cceEEeeeecCCCceEEEE
Confidence 76 5544322111110 0122233467777777777789999987653222211 0 0011233332 3456767
Q ss_pred eCCCCeEEEEeCCCCceeEc-cccccccCceEEEE--eCCeEEEEecCCCeEEEEeccCC
Q 016552 302 DENSCTLSRYDEVMDDWKEV-VKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 302 ~~~~~~l~~yd~~~~~W~~v-~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++.++.|.+||..+..-... ............+. .+|+.++.|+..+.|.+||+.+.
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 77788999999876532211 11111222222222 36777788777888999998743
No 115
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.24 E-value=0.013 Score=54.06 Aligned_cols=189 Identities=10% Similarity=0.071 Sum_probs=97.3
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCcc
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEK 226 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~ 226 (387)
+..++.|+.+ ..+.+||..+..-...-..+.......+..-+++.++.||.+. .+.+|+...+.
T Consensus 76 ~~~l~s~s~D-------g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~--------~i~v~~~~~~~- 139 (354)
T 2pbi_B 76 KRRIVSSSQD-------GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDN--------KCSVYPLTFDK- 139 (354)
T ss_dssp SSEEEEEETT-------SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTS--------EEEEEECCCCT-
T ss_pred CCEEEEEeCC-------CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCC--------CEEEEEEeccc-
Confidence 4455555533 2577788776654432222222222222233667778887655 67778775543
Q ss_pred ccCeEEcCCCCCCC-ccccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe---CCeEEE
Q 016552 227 NSRWEKTGELKDGR-FSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD---EEVLYG 300 (387)
Q Consensus 227 ~~~W~~~~~~p~~~-~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~---~~~ly~ 300 (387)
=.......... .......++. -++...+.++.+..+.++|+++++-...-..... ...++.+. ++.+++
T Consensus 140 ---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 140 ---NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA--DVLCLDLAPSETGNTFV 214 (354)
T ss_dssp ---TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECCCSSCCEEE
T ss_pred ---cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC--CeEEEEEEeCCCCCEEE
Confidence 00000000000 0000011222 2454555555567899999988764322110010 11122221 346777
Q ss_pred EeCCCCeEEEEeCCCCceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccCC
Q 016552 301 IDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.++.++.+..||..+...... ..........+. .++..++.|+....+.+||+.+.
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQA--FETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEeCCCeEEEEECCCCcEEEE--ecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 777789999999988764332 222222332333 35778888888888999998754
No 116
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.20 E-value=0.052 Score=48.15 Aligned_cols=184 Identities=15% Similarity=0.082 Sum_probs=99.0
Q ss_pred EEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccc
Q 016552 148 KLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKN 227 (387)
Q Consensus 148 ~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~ 227 (387)
.||+++... ..+++||+.++ .+.+.. +.......+..-++++|+..... ..+.+||+.+++
T Consensus 41 ~l~~~~~~~-------~~i~~~~~~~~-~~~~~~-~~~~~~~l~~~~dg~l~v~~~~~--------~~i~~~d~~~g~-- 101 (296)
T 3e5z_A 41 AVIFSDVRQ-------NRTWAWSDDGQ-LSPEMH-PSHHQNGHCLNKQGHLIACSHGL--------RRLERQREPGGE-- 101 (296)
T ss_dssp EEEEEEGGG-------TEEEEEETTSC-EEEEES-SCSSEEEEEECTTCCEEEEETTT--------TEEEEECSTTCC--
T ss_pred EEEEEeCCC-------CEEEEEECCCC-eEEEEC-CCCCcceeeECCCCcEEEEecCC--------CeEEEEcCCCCc--
Confidence 488877532 36899999988 555432 22111112222367888765321 368899998888
Q ss_pred cCeEEcCCCCCC-CccccceEEEEECCEEEEEee---e--------------CCeEEEEECCCCceeecccccccCCCCc
Q 016552 228 SRWEKTGELKDG-RFSREAIDAVGWKGKLCLVNV---K--------------GAEGAVYDVVANTWDDMREGMVRGWRGP 289 (387)
Q Consensus 228 ~~W~~~~~~p~~-~~~~~~~~~~~~~g~lyv~gg---~--------------~~~i~~yD~~~~~W~~~~~~~~~~~~~~ 289 (387)
...+...... ........++--+|++|+... . ...++.||+. ++...+..... ...
T Consensus 102 --~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~---~~~ 175 (296)
T 3e5z_A 102 --WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV---KPN 175 (296)
T ss_dssp --EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS---SEE
T ss_pred --EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC---CCc
Confidence 7655321111 011111223334788998631 1 1478889887 55444332111 112
Q ss_pred EEEE-eCCeEEEEeCCCCeEEEEeCC-CCce-e--EccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 290 VAAM-DEEVLYGIDENSCTLSRYDEV-MDDW-K--EVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 290 ~~~~-~~~~ly~~~~~~~~l~~yd~~-~~~W-~--~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.+++ .++++++.+...+.|++||.+ +++. . .+...........+..-+|+||+.. +..|.+||+...
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~ 247 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGD 247 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSC
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCC
Confidence 3333 255655666666789999986 4444 1 1111111111122334578888876 677999998743
No 117
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.18 E-value=0.016 Score=53.84 Aligned_cols=189 Identities=10% Similarity=0.050 Sum_probs=99.9
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCc------ee-eCCCCCCCC-cceeEEEe-C-CEEEEEecCCCCCCCCCcceE
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRT------WT-FGPELVTPR-RWCAAGCS-R-GAVYVASGIGSQFSSDVAKSV 216 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~------W~-~l~~~p~~r-~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v 216 (387)
+.+++.|+.+ ..+.+||..+.. -. .+....... .....+.. + +.+++.|+.+. .+
T Consensus 126 ~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--------~v 190 (416)
T 2pm9_A 126 DNVLASGGNN-------GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSN--------FA 190 (416)
T ss_dssp TTBEEEECSS-------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSS--------CE
T ss_pred CCEEEEEcCC-------CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCC--------CE
Confidence 5566666643 257888887765 11 111111111 11122222 3 56777776644 68
Q ss_pred EEEECCCCccccCeEEcCCCCCCCcc-ccceEEEEE--CC-EEEEEeeeCC---eEEEEECCCCceeecccccc--cCCC
Q 016552 217 EKWDLMNGEKNSRWEKTGELKDGRFS-REAIDAVGW--KG-KLCLVNVKGA---EGAVYDVVANTWDDMREGMV--RGWR 287 (387)
Q Consensus 217 ~~yd~~~~~~~~~W~~~~~~p~~~~~-~~~~~~~~~--~g-~lyv~gg~~~---~i~~yD~~~~~W~~~~~~~~--~~~~ 287 (387)
.+||..+.+ -...-..+..... .....++.+ ++ .+++.++.+. .+.+||..+..-. +.. +. ....
T Consensus 191 ~iwd~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~~ 264 (416)
T 2pm9_A 191 SIWDLKAKK----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-LQT-LNQGHQKG 264 (416)
T ss_dssp EEEETTTTE----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-SBC-CCSCCSSC
T ss_pred EEEECCCCC----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-cEE-eecCccCc
Confidence 899998877 4433222210000 011223332 33 4666666555 8999999875311 111 11 1111
Q ss_pred CcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceeEccccccccC--ceEEEEeCC-eEEEEecCCCeEEEEeccCC
Q 016552 288 GPVAAMD--EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKG--ARHAAAGGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 288 ~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~--~~~~~~~~g-~i~v~gg~~~~i~~~d~~~~ 358 (387)
..+++.. ++.+++.++.++.|.+||.++.+- +........ ......-++ ++++.++....+.+||+.+.
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ--LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCCE--EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc--ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 2233332 567777777788999999987643 222222222 122233345 78888888889999999865
No 118
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.18 E-value=0.014 Score=59.25 Aligned_cols=183 Identities=11% Similarity=-0.006 Sum_probs=104.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccC----CceeeCC--CCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPIC----RTWTFGP--ELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVE 217 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t----~~W~~l~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~ 217 (387)
++.||+.-. ....++++++.+ ..-..+. .+..|. ..++ .+++||++-. ....|.
T Consensus 417 ~~~Ly~sD~-------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~---glavD~~~g~LY~tD~--------~~~~I~ 478 (699)
T 1n7d_A 417 SNRIYWSDL-------SQRMICSTQLDRAHGVSSYDTVISRDIQAPD---GLAVDWIHSNIYWTDS--------VLGTVS 478 (699)
T ss_dssp TTEEEECCT-------TTTSBEEEESCCCCC-CCCCCBCCSCC--CC---CEECCCSSSBCEECCT--------TTSCEE
T ss_pred cCeEEEEec-------CCCeEEEEecCCCCCCcceEEEEeCCCCCcc---eEEEEeeCCcEEEEec--------cCCeEE
Confidence 567888632 224688888875 1111111 111121 1222 4678998632 124678
Q ss_pred EEECCCCccccCeEEcCC--CCCCCccccceEEEE--ECCEEEEEeeeC-CeEEEEECCCCceeecccccccCCCCcEEE
Q 016552 218 KWDLMNGEKNSRWEKTGE--LKDGRFSREAIDAVG--WKGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRGPVAA 292 (387)
Q Consensus 218 ~yd~~~~~~~~~W~~~~~--~p~~~~~~~~~~~~~--~~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~ 292 (387)
++|+.... -..+.. +..++ ..++ .+|.||+..... ..|+++++....-+.+.. ....+ ..+++
T Consensus 479 v~d~dg~~----~~~l~~~~~~~P~------giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~-~~l~~-PnGla 546 (699)
T 1n7d_A 479 VADTKGVK----RKTLFREQGSKPR------AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-ENIQW-PNGIT 546 (699)
T ss_dssp EEBSSSCC----EEEECCCSSCCCC------CEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC-SSCSS-CCCEE
T ss_pred EEecCCCc----eEEEEeCCCCCcc------eEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe-CCCCC-ccEEE
Confidence 88887665 444322 22121 1222 267888876332 578888876543322211 01111 12344
Q ss_pred E--eCCeEEEEeCCCCeEEEEeCCCCceeEcccc-ccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 293 M--DEEVLYGIDENSCTLSRYDEVMDDWKEVVKS-DLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 293 ~--~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~-~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+ .+++||+.+...+.|.++|+++..-+.+... .....+.+++..++.||++-..+..|..+|..+.
T Consensus 547 vd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 547 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp ECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred EeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 4 3689999998778999999987544444332 2334456667778899999777789999997643
No 119
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.18 E-value=0.015 Score=52.82 Aligned_cols=187 Identities=9% Similarity=0.017 Sum_probs=100.5
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCC-CCcceeEEEe--CCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVT-PRRWCAAGCS--RGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
+.+++.|+.+ ..+.+||..+.+-... +.. .......+.. ++++++.|+.+. .+.+||..+
T Consensus 85 ~~~l~~~~~d-------g~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR-------GIIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKDH--------ALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT-------CEEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETTS--------CEEEEETTT
T ss_pred CCEEEEecCC-------CEEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCCC--------eEEEEEeec
Confidence 4677777643 2688899887653321 111 1111122222 567777777644 788999988
Q ss_pred CccccCeEEc-CCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeec-cc---------cc--------
Q 016552 224 GEKNSRWEKT-GELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDM-RE---------GM-------- 282 (387)
Q Consensus 224 ~~~~~~W~~~-~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~---------~~-------- 282 (387)
.+ -... ..+..... ...++.+ ++...+.++.+..+.+||..+.+-... .. ..
T Consensus 148 ~~----~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (366)
T 3k26_A 148 DT----LVAIFGGVEGHRD---EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIH 220 (366)
T ss_dssp TE----EEEEECSTTSCSS---CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEEC
T ss_pred Ce----EEEEecccccccC---ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeec
Confidence 76 3322 11111111 1223332 466666777667899999987642110 00 00
Q ss_pred ------c--cCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCce------------eEccccccccC--ceEEEEeC--C
Q 016552 283 ------V--RGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDW------------KEVVKSDLLKG--ARHAAAGG--G 338 (387)
Q Consensus 283 ------~--~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W------------~~v~~~~~~~~--~~~~~~~~--g 338 (387)
. ......+++.. +.+++.++.++.+.+||..+..= ..+........ .......+ +
T Consensus 221 ~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 299 (366)
T 3k26_A 221 FPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ 299 (366)
T ss_dssp CCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS
T ss_pred cCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC
Confidence 0 11112344455 45666676788999999866421 11111111111 12223445 7
Q ss_pred eEEEEecCCCeEEEEeccCC
Q 016552 339 RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 339 ~i~v~gg~~~~i~~~d~~~~ 358 (387)
++++.|+..+.|.+||+.+.
T Consensus 300 ~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 300 KMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp SEEEEECTTSCEEEEECCSS
T ss_pred cEEEEEecCCcEEEEECCCC
Confidence 88888888889999999864
No 120
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.18 E-value=0.036 Score=49.97 Aligned_cols=152 Identities=11% Similarity=-0.030 Sum_probs=75.6
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCC-CcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTP-RRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~-r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+|+.++.. ..++++|+.+++....-+.+.. .....+..-++ .+|+.+..+ ..+.+||..+
T Consensus 10 ~~~~~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~--------~~i~~~d~~t 74 (349)
T 1jmx_B 10 GHEYMIVTNYP-------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY--------GDIYGIDLDT 74 (349)
T ss_dssp TCEEEEEEETT-------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT--------TEEEEEETTT
T ss_pred CCEEEEEeCCC-------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC--------CcEEEEeCCC
Confidence 46777776632 4689999998876543222220 11122222344 578776432 3789999988
Q ss_pred CccccCeEEcCCCCCC---CccccceEEEEECCE-EEEEeee-----------CCeEEEEECCCCceeecccccccCCCC
Q 016552 224 GEKNSRWEKTGELKDG---RFSREAIDAVGWKGK-LCLVNVK-----------GAEGAVYDVVANTWDDMREGMVRGWRG 288 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~---~~~~~~~~~~~~~g~-lyv~gg~-----------~~~i~~yD~~~~~W~~~~~~~~~~~~~ 288 (387)
++ -...-..+.. +.......+..-+|+ +|+.+.. ...+.+||+++++-...-.........
T Consensus 75 ~~----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (349)
T 1jmx_B 75 CK----NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQV 150 (349)
T ss_dssp TE----EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSC
T ss_pred Cc----EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcc
Confidence 87 4432222210 000000112222554 5655532 268999999875322111101111112
Q ss_pred cEEEE-eCCeEEEEeCCCCeEEEEeCCCCcee
Q 016552 289 PVAAM-DEEVLYGIDENSCTLSRYDEVMDDWK 319 (387)
Q Consensus 289 ~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~ 319 (387)
.++++ .+|++|+. ++.+++||.++.+-.
T Consensus 151 ~~~~~s~dg~l~~~---~~~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 151 YLMRAADDGSLYVA---GPDIYKMDVKTGKYT 179 (349)
T ss_dssp CCEEECTTSCEEEE---SSSEEEECTTTCCEE
T ss_pred cceeECCCCcEEEc---cCcEEEEeCCCCcee
Confidence 22222 35567774 234888888776543
No 121
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.17 E-value=0.012 Score=54.54 Aligned_cols=146 Identities=8% Similarity=0.087 Sum_probs=80.6
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEECC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~ 271 (387)
++.+++.|+.+. .+.+||..+.+ -......+.... ...... ++.+.+.++.+..+.+||+.
T Consensus 111 ~~~~l~s~~~d~--------~i~iwd~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 111 DTGMFTSSSFDK--------TLKVWDTNTLQ----TADVFNFEETVY----SHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp CTTCEEEEETTS--------EEEEEETTTTE----EEEEEECSSCEE----EEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred CCcEEEEEeCCC--------eEEEeeCCCCc----cceeccCCCcee----eeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 455677766544 78899998877 443333222211 111111 34466677666789999998
Q ss_pred CCceeecccccccCCCCcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCc--eeEcccc------------ccccCceEEEE
Q 016552 272 ANTWDDMREGMVRGWRGPVAAMD-EE-VLYGIDENSCTLSRYDEVMDD--WKEVVKS------------DLLKGARHAAA 335 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~~~~~~~~-~~-~ly~~~~~~~~l~~yd~~~~~--W~~v~~~------------~~~~~~~~~~~ 335 (387)
+.+-...-. .......+++.. ++ .+++.++.++.+..||..+.. ...+... .........+.
T Consensus 175 ~~~~~~~~~--~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 175 SGSCSHILQ--GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp SSCCCEEEC--CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred Ccceeeeec--CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 764321111 001111233332 33 367777778899999987653 1121100 11112222233
Q ss_pred --eCCeEEEEecCCCeEEEEeccCC
Q 016552 336 --GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 336 --~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.+++.++.++..+.+.+||+.+.
T Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 253 FTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EcCCCCEEEEecCCCeEEEEECCCC
Confidence 36778888788888999999864
No 122
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.16 E-value=0.053 Score=48.14 Aligned_cols=190 Identities=9% Similarity=-0.037 Sum_probs=97.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCC----CCcceeEEEeCCEEEEE----ecCCCC-----CCCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVT----PRRWCAAGCSRGAVYVA----SGIGSQ-----FSSDV 212 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~----~r~~~~~~~~~~~iyv~----GG~~~~-----~~~~~ 212 (387)
++.+|+.... ...+.+||+.+++.+.+..... .+....+..-+|++|+. |..... .....
T Consensus 79 dg~l~v~~~~-------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~ 151 (296)
T 3e5z_A 79 QGHLIACSHG-------LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELP 151 (296)
T ss_dssp TCCEEEEETT-------TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSS
T ss_pred CCcEEEEecC-------CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCC
Confidence 5677766431 1368999998888776532211 11122233346789987 331100 00011
Q ss_pred cceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECC-CCce-eeccc-ccccCCCCc
Q 016552 213 AKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVV-ANTW-DDMRE-GMVRGWRGP 289 (387)
Q Consensus 213 ~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~-~~~W-~~~~~-~~~~~~~~~ 289 (387)
...++.||+. ++ ...+..-. . .. ...+..-+|++++.+.....+.+||+. +++. ..... ....+.. .
T Consensus 152 ~~~l~~~~~~-g~----~~~~~~~~-~-~~--~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p-~ 221 (296)
T 3e5z_A 152 GRWVFRLAPD-GT----LSAPIRDR-V-KP--NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT-D 221 (296)
T ss_dssp SCEEEEECTT-SC----EEEEECCC-S-SE--EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC-C
T ss_pred CcEEEEECCC-CC----EEEeecCC-C-CC--ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC-C
Confidence 2367888887 55 44433111 0 10 111222367776444444789999986 4554 21111 0111111 1
Q ss_pred EEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEE-EeCC-eEEEEecCCCeEEEEeccCC
Q 016552 290 VAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAA-AGGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 290 ~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~g-~i~v~gg~~~~i~~~d~~~~ 358 (387)
.+++ .+|.||+.. .+.|.+||++...-..+..... ....+. .-++ .||+.+. ..++.+++.+.
T Consensus 222 ~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~--~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~~ 287 (296)
T 3e5z_A 222 GLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQT--TSNLCFGGPEGRTLYMTVS--TEFWSIETNVR 287 (296)
T ss_dssp SEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSC--CCEEEEESTTSCEEEEEET--TEEEEEECSCC
T ss_pred eEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCC--ceeEEEECCCCCEEEEEcC--CeEEEEEcccc
Confidence 2333 467888876 6789999998665444433222 122222 2233 4666533 47888888754
No 123
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.15 E-value=0.18 Score=49.73 Aligned_cols=205 Identities=11% Similarity=0.076 Sum_probs=114.8
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccEEEec-cCC--ceeeCCCCCCC--------CcceeEEEeCCEEEEEecCCCCCC
Q 016552 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDP-ICR--TWTFGPELVTP--------RRWCAAGCSRGAVYVASGIGSQFS 209 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~-~t~--~W~~l~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~ 209 (387)
..++.++.||+.... ...++.+|+ .|. .|+.-...... ......++.+++||+...
T Consensus 57 ~P~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------ 123 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF-------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------ 123 (571)
T ss_dssp CCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------
T ss_pred ccEEECCEEEEEeCC-------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------
Confidence 345678999987542 136899999 776 58874332211 111234567889998632
Q ss_pred CCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeee-----CCeEEEEECCCC--ceeeccccc
Q 016552 210 SDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVAN--TWDDMREGM 282 (387)
Q Consensus 210 ~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~-----~~~i~~yD~~~~--~W~~~~~~~ 282 (387)
-..+.++|..+++.. |+.-..-+...... ...-++.++++|+.... ...+.+||.+++ .|+.-....
T Consensus 124 ---dg~l~alD~~tG~~~--W~~~~~~~~~~~~~-~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~ 197 (571)
T 2ad6_A 124 ---NGHLLALDAKTGKIN--WEVEVCDPKVGSTL-TQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGS 197 (571)
T ss_dssp ---TSEEEEEETTTCCEE--EEEECCCGGGTCBC-CSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred ---CCEEEEEECCCCCEE--EEecCCCCCcccee-ccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCC
Confidence 136789999988765 88543211000110 12234569999886542 357999999877 486432111
Q ss_pred c-----------------------cCC-------------CCcEEEEeCCeEEEEeCC---------------CCeEEEE
Q 016552 283 V-----------------------RGW-------------RGPVAAMDEEVLYGIDEN---------------SCTLSRY 311 (387)
Q Consensus 283 ~-----------------------~~~-------------~~~~~~~~~~~ly~~~~~---------------~~~l~~y 311 (387)
. ..| ...+.-...+.+|+-.++ .+.|+++
T Consensus 198 ~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Al 277 (571)
T 2ad6_A 198 DDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGR 277 (571)
T ss_dssp HHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEE
T ss_pred ccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEE
Confidence 0 000 011111234678876532 1359999
Q ss_pred eCCCC--ceeEccccc---c--ccCceEEEE--eCCe---EEEEecCCCeEEEEeccCCCCCCceEE
Q 016552 312 DEVMD--DWKEVVKSD---L--LKGARHAAA--GGGR---VCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 312 d~~~~--~W~~v~~~~---~--~~~~~~~~~--~~g~---i~v~gg~~~~i~~~d~~~~~~~~~W~~ 366 (387)
|++++ .|+.-.... . ......++. .+|+ +++++..+..++++|..+. ...|..
T Consensus 278 d~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~~w~~ 342 (571)
T 2ad6_A 278 DLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENG--NLIVAE 342 (571)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTC--CEEEEE
T ss_pred ecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCC--CEEeee
Confidence 99876 476432211 0 111222232 4674 6677677778999998754 235765
No 124
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.15 E-value=0.039 Score=49.65 Aligned_cols=186 Identities=9% Similarity=-0.058 Sum_probs=98.0
Q ss_pred CCE-EEEEecccCCCCCCCCccEEEec-cCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGK-LILLAATTHNFNPALTRPLIFDP-ICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~-l~v~GG~~~~~~~~~~~~~vyd~-~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++. .++.|+.+ ..+.+||. .++.-..+...+........+...+.+++.|+.+. .+.+||..+
T Consensus 67 ~~~~~l~~~~~d-------g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~--------~i~iwd~~~ 131 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-------GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDG--------LIEVIDPRN 131 (342)
T ss_dssp SSSEEEEEEETT-------SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTS--------EEEEECHHH
T ss_pred CCCcEEEEEcCC-------CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCC--------eEEEEcccc
Confidence 566 66666643 36899999 88877665441111222222222255666666543 678888765
Q ss_pred ---------CccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCC-Cc--eeecccccccCCCCcEE
Q 016552 224 ---------GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVA-NT--WDDMREGMVRGWRGPVA 291 (387)
Q Consensus 224 ---------~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~-~~--W~~~~~~~~~~~~~~~~ 291 (387)
.+ - +..+... ..........+. ++.+..+..+.+||..+ .. ...... .......++
T Consensus 132 ~~~~~~~~~~~----~--~~~~~~~---~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~i 199 (342)
T 1yfq_A 132 YGDGVIAVKNL----N--SNNTKVK---NKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEES--GLKYQIRDV 199 (342)
T ss_dssp HTTBCEEEEES----C--SSSSSSC---CCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEEC--SCSSCEEEE
T ss_pred cccccccccCC----e--eeEEeeC---CceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeec--CCCCceeEE
Confidence 33 1 1111111 111223333444 45555557899999987 43 222211 111112334
Q ss_pred EEe--CCeEEEEeCCCCeEEEEeCCCC--c--eeEccccccc---------cCceEEEE--eCCeEEEEecCCCeEEEEe
Q 016552 292 AMD--EEVLYGIDENSCTLSRYDEVMD--D--WKEVVKSDLL---------KGARHAAA--GGGRVCAVCENGGGIVVVD 354 (387)
Q Consensus 292 ~~~--~~~ly~~~~~~~~l~~yd~~~~--~--W~~v~~~~~~---------~~~~~~~~--~~g~i~v~gg~~~~i~~~d 354 (387)
+.. ++.+++.+..++.+.+||.+.. . ...+...... ......+. .++++++.|+..+.+.+||
T Consensus 200 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp EECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 443 4677777777888888887654 1 1111111111 11222333 3677778877788899999
Q ss_pred ccCC
Q 016552 355 VKAA 358 (387)
Q Consensus 355 ~~~~ 358 (387)
+.+.
T Consensus 280 ~~~~ 283 (342)
T 1yfq_A 280 LQTR 283 (342)
T ss_dssp TTTT
T ss_pred CccH
Confidence 9855
No 125
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.14 E-value=0.09 Score=47.65 Aligned_cols=182 Identities=12% Similarity=0.012 Sum_probs=94.5
Q ss_pred ccEEEeccCCceeeCCC-CCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCC-----C
Q 016552 165 RPLIFDPICRTWTFGPE-LVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELK-----D 238 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p-----~ 238 (387)
.++++|+.+++...... -........+..-+++|||..... ..+.+||+...... -..+.... .
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~--------~~v~~~~~~g~~~~--~~~~~~~~~~g~~~ 139 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL--------HQVFKLDPHSKEGP--LLILGRSMQPGSDQ 139 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT--------TEEEEECTTCSSCC--SEEESBTTBCCCST
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCC--------CEEEEEeCCCCeEE--EEEecccCCCCCCc
Confidence 58999998877543211 011111112222367899986432 37888998655100 22222110 0
Q ss_pred CCccccceEEEEE---CCEEEEEee-eCCeEEEEECCCCceeecccc-c-----ccCCC-CcEEEEe--CCeEEEEeCCC
Q 016552 239 GRFSREAIDAVGW---KGKLCLVNV-KGAEGAVYDVVANTWDDMREG-M-----VRGWR-GPVAAMD--EEVLYGIDENS 305 (387)
Q Consensus 239 ~~~~~~~~~~~~~---~g~lyv~gg-~~~~i~~yD~~~~~W~~~~~~-~-----~~~~~-~~~~~~~--~~~ly~~~~~~ 305 (387)
.... ....+++ +|.+|+... ....+.+||+....-..+... . +.... ...+++. ++.||+.+...
T Consensus 140 ~~~~--~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 140 NHFC--QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp TCCS--SEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred cccC--CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 1111 1223333 688999986 457899999655433333210 0 00111 1234443 38999999888
Q ss_pred CeEEEEeCCCCceeEcccccc-ccCceEEEEeCCeEEEEec-------CCCeEEEEeccCC
Q 016552 306 CTLSRYDEVMDDWKEVVKSDL-LKGARHAAAGGGRVCAVCE-------NGGGIVVVDVKAA 358 (387)
Q Consensus 306 ~~l~~yd~~~~~W~~v~~~~~-~~~~~~~~~~~g~i~v~gg-------~~~~i~~~d~~~~ 358 (387)
+.|.+||+++++....-..+. ......+....+.++...| .+..+.++|..+.
T Consensus 218 ~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC
T ss_pred CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC
Confidence 899999999666554322221 1112222222344444433 3457888887644
No 126
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.14 E-value=0.095 Score=48.22 Aligned_cols=202 Identities=8% Similarity=0.001 Sum_probs=101.1
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccEEEeccCCc----eeeCCCCCCCC-cceeE-EEeC----C---EEEEEecCCCC
Q 016552 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDPICRT----WTFGPELVTPR-RWCAA-GCSR----G---AVYVASGIGSQ 207 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~----W~~l~~~p~~r-~~~~~-~~~~----~---~iyv~GG~~~~ 207 (387)
.++.....+++.|+.+ ..+.+||..+.. +..+..+.... ..... ..-+ + ++++.|+.+.
T Consensus 20 ~~~~~~~~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg- 91 (397)
T 1sq9_A 20 FSVSACNSFTVSCSGD-------GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG- 91 (397)
T ss_dssp EEEEECSSEEEEEETT-------SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS-
T ss_pred EEEEecCCeEEEEcCC-------CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCC-
Confidence 3444455666666643 367888888776 22111111111 11122 2234 6 7777777644
Q ss_pred CCCCCcceEEEEECCCCcccc--CeEEcCCCCCCCccccceEEEE-----ECCEE-EEEeeeCCeEEEEECCC------C
Q 016552 208 FSSDVAKSVEKWDLMNGEKNS--RWEKTGELKDGRFSREAIDAVG-----WKGKL-CLVNVKGAEGAVYDVVA------N 273 (387)
Q Consensus 208 ~~~~~~~~v~~yd~~~~~~~~--~W~~~~~~p~~~~~~~~~~~~~-----~~g~l-yv~gg~~~~i~~yD~~~------~ 273 (387)
.+.+||..+..... .+..+...+............. -++.. ++.++.+..+.+||..+ .
T Consensus 92 -------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 92 -------DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp -------CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred -------CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 67888877766100 0233332210000001122233 35666 66776667899999877 3
Q ss_pred c---eeecccc-------cccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceeEcccc-ccc---cCceEEEE--e
Q 016552 274 T---WDDMREG-------MVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMDDWKEVVKS-DLL---KGARHAAA--G 336 (387)
Q Consensus 274 ~---W~~~~~~-------~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~-~~~---~~~~~~~~--~ 336 (387)
+ |...... ........+++.. ++ +++.+..++.+..||..+..-...-.. ... ......+. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 2 2111010 0011122344443 45 666777788999999987643332221 001 22222333 3
Q ss_pred CCeEEEEecCC---CeEEEEeccCC
Q 016552 337 GGRVCAVCENG---GGIVVVDVKAA 358 (387)
Q Consensus 337 ~g~i~v~gg~~---~~i~~~d~~~~ 358 (387)
+++++++++.. ..|.+||+.+.
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTC
T ss_pred CCCEEEEEecCCCCceEEEEECCCC
Confidence 67777777766 78999998854
No 127
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.14 E-value=0.079 Score=49.94 Aligned_cols=195 Identities=13% Similarity=0.024 Sum_probs=107.0
Q ss_pred ECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
.++.||+.... ...+.++|+.++.-..+.... .....+....++.||+...... ..+.++|+..+
T Consensus 140 ~~g~lyv~d~~-------~~~I~~id~~~g~~~~~~~~~-~~~~ia~~~~g~~l~~~d~~~~-------~~I~~~d~~~~ 204 (409)
T 3hrp_A 140 GNNTVLAYQRD-------DPRVRLISVDDNKVTTVHPGF-KGGKPAVTKDKQRVYSIGWEGT-------HTVYVYMKASG 204 (409)
T ss_dssp STTEEEEEETT-------TTEEEEEETTTTEEEEEEETC-CBCBCEECTTSSEEEEEBSSTT-------CEEEEEEGGGT
T ss_pred CCCCEEEEecC-------CCcEEEEECCCCEEEEeeccC-CCCceeEecCCCcEEEEecCCC-------ceEEEEEcCCC
Confidence 46788888642 246899999988766543321 1111222222346777643221 27888888765
Q ss_pred ccccCeEEcCCCCCCCccccceEEEEE-CCEEEEEeeeCCeEEEEECCCCceeeccc---ccccCCC-CcEEEEe--CCe
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVGW-KGKLCLVNVKGAEGAVYDVVANTWDDMRE---GMVRGWR-GPVAAMD--EEV 297 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~~-~g~lyv~gg~~~~i~~yD~~~~~W~~~~~---~~~~~~~-~~~~~~~--~~~ 297 (387)
. ....+...+..........++.- +|.||+... ...+..||+.+..-..+.. ....++. ...+++. ++.
T Consensus 205 ~---~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 205 W---APTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp T---CEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE
T ss_pred c---eeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE
Confidence 3 02233111110011111222222 688999543 3579999999876554421 0111111 1155554 589
Q ss_pred EEEEeCCCCeEEEEeCCCCceeEcccc------------ccccCceEEEE-eCCeEEEEec-CCCeEEEEeccCC
Q 016552 298 LYGIDENSCTLSRYDEVMDDWKEVVKS------------DLLKGARHAAA-GGGRVCAVCE-NGGGIVVVDVKAA 358 (387)
Q Consensus 298 ly~~~~~~~~l~~yd~~~~~W~~v~~~------------~~~~~~~~~~~-~~g~i~v~gg-~~~~i~~~d~~~~ 358 (387)
||+.+...+.|++||++...-...... .....+..++. -+|.||+.-. .+..|..+|+.+.
T Consensus 281 lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp EEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred EEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 999988788999999876522222211 00122333333 3678999977 7889999995433
No 128
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.13 E-value=0.12 Score=52.07 Aligned_cols=204 Identities=17% Similarity=0.200 Sum_probs=116.0
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccEEEeccCC--ceeeCCCCCCC--------CcceeEEEeCCEEEEEecCCCCCCC
Q 016552 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTP--------RRWCAAGCSRGAVYVASGIGSQFSS 210 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~--~W~~l~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~ 210 (387)
..++.++.||+.... ..++.+|..|. .|+.-...+.. ......++.+++||+...
T Consensus 72 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------- 136 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW--------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------- 136 (677)
T ss_dssp CCEEETTEEEEECGG--------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------
T ss_pred CCEEECCEEEEECCC--------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------
Confidence 345678999988652 35899999887 58874432210 112234567889988632
Q ss_pred CCcceEEEEECCCCccccCeEEcCC-CCCCCccccceEEEEECCEEEEEeee-----CCeEEEEECCCCc--eeeccccc
Q 016552 211 DVAKSVEKWDLMNGEKNSRWEKTGE-LKDGRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVANT--WDDMREGM 282 (387)
Q Consensus 211 ~~~~~v~~yd~~~~~~~~~W~~~~~-~p~~~~~~~~~~~~~~~g~lyv~gg~-----~~~i~~yD~~~~~--W~~~~~~~ 282 (387)
-..+.++|..+++.. |+.-.. -+..... ....-++.++++|+.... ...+.+||.++++ |+.-....
T Consensus 137 --dg~l~alD~~tG~~~--W~~~~~~~~~~~~~-~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~ 211 (677)
T 1kb0_A 137 --DGRLIALDAATGKEV--WHQNTFEGQKGSLT-ITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPG 211 (677)
T ss_dssp --TSEEEEEETTTCCEE--EEEETTTTCCSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCC
T ss_pred --CCEEEEEECCCCCEE--eeecCCcCcCcCcc-cccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCC
Confidence 136889999988866 886432 1110011 112345668999886542 2579999998874 86532111
Q ss_pred cc--------------CCC----------C----cEEEE--eCCeEEEEeCCC------------------CeEEEEeCC
Q 016552 283 VR--------------GWR----------G----PVAAM--DEEVLYGIDENS------------------CTLSRYDEV 314 (387)
Q Consensus 283 ~~--------------~~~----------~----~~~~~--~~~~ly~~~~~~------------------~~l~~yd~~ 314 (387)
.. .|. + ...++ .++.||+-.++. +.|+++|.+
T Consensus 212 ~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~ 291 (677)
T 1kb0_A 212 DPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPD 291 (677)
T ss_dssp CTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT
T ss_pred CccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECC
Confidence 10 010 0 12222 366777654321 259999998
Q ss_pred CC--ceeEcccccc-----ccCceEEE--EeCC---eEEEEecCCCeEEEEeccCCCCCCceEE
Q 016552 315 MD--DWKEVVKSDL-----LKGARHAA--AGGG---RVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 315 ~~--~W~~v~~~~~-----~~~~~~~~--~~~g---~i~v~gg~~~~i~~~d~~~~~~~~~W~~ 366 (387)
++ .|..-..... ......++ ..+| ++++++..++.++++|..++ ...|.+
T Consensus 292 TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG--~~l~~~ 353 (677)
T 1kb0_A 292 TGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG--KFISAK 353 (677)
T ss_dssp TCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC--CEEEEE
T ss_pred CCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC--CEeccc
Confidence 87 4764221110 11122222 2366 67777777788999998864 134654
No 129
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.11 E-value=0.12 Score=45.13 Aligned_cols=154 Identities=10% Similarity=0.023 Sum_probs=86.9
Q ss_pred eEEEEE--CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEe--CCEEEEEecCCCCCCCCCcce
Q 016552 140 VQLVSL--SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS--RGAVYVASGIGSQFSSDVAKS 215 (387)
Q Consensus 140 ~~~~~~--~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 215 (387)
..++.. ++.||+.-.. ...+.++|+....-+.+.+....+.. ..++. +++||+..... ....
T Consensus 82 ~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~P~-~i~vd~~~g~lyv~~~~~------~~~~ 147 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQ-------LDRIEVAKMDGTQRRVLFDTGLVNPR-GIVTDPVRGNLYWTDWNR------DNPK 147 (267)
T ss_dssp EEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSSEE-EEEEETTTTEEEEEECCS------SSCE
T ss_pred cEEEEEecCCeEEEEECC-------CCEEEEEEcCCCCEEEEEECCCCCcc-EEEEeeCCCEEEEEECCC------CCcE
Confidence 344443 5789987542 24688888875543333211111111 22232 67999985321 1246
Q ss_pred EEEEECCCCccccCeEEcCCCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEE
Q 016552 216 VEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA 292 (387)
Q Consensus 216 v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~ 292 (387)
+.++++.... -..+...... . .....+ ++.||+.....+.+.+||+....-..+.... ..-..++
T Consensus 148 I~~~~~dg~~----~~~~~~~~~~-~----P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~---~~P~gi~ 215 (267)
T 1npe_A 148 IETSHMDGTN----RRILAQDNLG-L----PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL---QYPFAVT 215 (267)
T ss_dssp EEEEETTSCC----CEEEECTTCS-C----EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC---CSEEEEE
T ss_pred EEEEecCCCC----cEEEEECCCC-C----CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC---CCceEEE
Confidence 7788876544 3333211111 1 222233 4689998776678999999864322221111 1112456
Q ss_pred EeCCeEEEEeCCCCeEEEEeCCCCcee
Q 016552 293 MDEEVLYGIDENSCTLSRYDEVMDDWK 319 (387)
Q Consensus 293 ~~~~~ly~~~~~~~~l~~yd~~~~~W~ 319 (387)
+.++.||+.+..++.|.++|+++.+-.
T Consensus 216 ~d~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 216 SYGKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp EETTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EeCCEEEEEECCCCeEEEEeCCCCCce
Confidence 678899999877789999999877544
No 130
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.11 E-value=0.13 Score=45.67 Aligned_cols=196 Identities=9% Similarity=0.012 Sum_probs=98.7
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCC-------ceeeCCCCCCCCcceeEEEe--C--CEEEEEecCCCCCCCCCcce
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICR-------TWTFGPELVTPRRWCAAGCS--R--GAVYVASGIGSQFSSDVAKS 215 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~-------~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~ 215 (387)
+.+++.|+.++ .+.+||..+. .|+.+..+............ + +.+++.|+.+. .
T Consensus 71 ~~~l~s~~~dg-------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg--------~ 135 (351)
T 3f3f_A 71 GRIIASASYDK-------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG--------I 135 (351)
T ss_dssp CSEEEEEETTS-------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC--------E
T ss_pred CCEEEEEcCCC-------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC--------c
Confidence 56777776432 5788888764 23333222222221122222 3 66667766544 7
Q ss_pred EEEEECCCCccccCeEEcC-----CCCCCCccccceEEEEE-----CCEEEEEeeeCCeEEEEECCCCceeecccccccC
Q 016552 216 VEKWDLMNGEKNSRWEKTG-----ELKDGRFSREAIDAVGW-----KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRG 285 (387)
Q Consensus 216 v~~yd~~~~~~~~~W~~~~-----~~p~~~~~~~~~~~~~~-----~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~ 285 (387)
+.+||..+.+....|.... ........ ....++.. ++.+++.++....+..++...+....+.......
T Consensus 136 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 214 (351)
T 3f3f_A 136 LRLYDALEPSDLRSWTLTSEMKVLSIPPANHL-QSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHK 214 (351)
T ss_dssp EEEEECSSTTCTTCCEEEEEEESCSCCCSSCS-CCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCC
T ss_pred EEEecCCChHHhccccccccccccccccCCcc-cceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCC
Confidence 7889887665222233111 01100000 00112222 2566666666656666666666654333211111
Q ss_pred CCCcEEEEe-CC----eEEEEeCCCCeEEEEeCCCCc-------------------------------------------
Q 016552 286 WRGPVAAMD-EE----VLYGIDENSCTLSRYDEVMDD------------------------------------------- 317 (387)
Q Consensus 286 ~~~~~~~~~-~~----~ly~~~~~~~~l~~yd~~~~~------------------------------------------- 317 (387)
....+++.. ++ .+++.++.++.|.+||..+..
T Consensus 215 ~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (351)
T 3f3f_A 215 SLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNL 294 (351)
T ss_dssp SCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSE
T ss_pred cceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccc
Confidence 112233333 33 677777778899999987631
Q ss_pred -eeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccCC
Q 016552 318 -WKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 318 -W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
...+............+. .++++++.|+..+.|.+||+.+.
T Consensus 295 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 295 QVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp EEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred cccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 112221221222332333 36778888788888999999864
No 131
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.11 E-value=0.14 Score=51.92 Aligned_cols=198 Identities=16% Similarity=0.175 Sum_probs=110.9
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccEEEeccCC--ceeeCCCCCCC--------CcceeEEEeCCEEEEEecCCCCCCC
Q 016552 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTP--------RRWCAAGCSRGAVYVASGIGSQFSS 210 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~--~W~~l~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~ 210 (387)
..++.++.||+.... ..++.+|..|. .|+.-...+.. ......++.+++||+... +
T Consensus 65 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d----- 130 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF--------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-D----- 130 (689)
T ss_dssp CCEEETTEEEEECGG--------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T-----
T ss_pred cCEEECCEEEEEcCC--------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-C-----
Confidence 345678999987642 35889999876 58874433211 011234567889988642 1
Q ss_pred CCcceEEEEECCCCccccCeEEcCC-CCCCCccccceEEEEECCEEEEEeee-----CCeEEEEECCCCc--eeeccc-c
Q 016552 211 DVAKSVEKWDLMNGEKNSRWEKTGE-LKDGRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVANT--WDDMRE-G 281 (387)
Q Consensus 211 ~~~~~v~~yd~~~~~~~~~W~~~~~-~p~~~~~~~~~~~~~~~g~lyv~gg~-----~~~i~~yD~~~~~--W~~~~~-~ 281 (387)
..+.++|..|++.. |+.-.. -+..... ....-++.+|++|+-.+. ...+.+||.++++ |+.-.. .
T Consensus 131 ---g~l~AlDa~TG~~~--W~~~~~~~~~~~~~-~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~ 204 (689)
T 1yiq_A 131 ---GRLEAIDAKTGQRA--WSVDTRADHKRSYT-ITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPG 204 (689)
T ss_dssp ---SEEEEEETTTCCEE--EEEECCSCTTSCCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCC
T ss_pred ---CEEEEEECCCCCEe--eeecCcCCCCCCcc-ccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCC
Confidence 36789999988866 886542 1111111 112345679999875432 2579999999885 874311 0
Q ss_pred ccc-------------CCC-------------CcEEEE--eCCeEEEEeCCC------------------CeEEEEeCCC
Q 016552 282 MVR-------------GWR-------------GPVAAM--DEEVLYGIDENS------------------CTLSRYDEVM 315 (387)
Q Consensus 282 ~~~-------------~~~-------------~~~~~~--~~~~ly~~~~~~------------------~~l~~yd~~~ 315 (387)
-+. .+. -...++ .++.||+-.++. +.|+++|.++
T Consensus 205 ~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~T 284 (689)
T 1yiq_A 205 DPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADT 284 (689)
T ss_dssp CTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTT
T ss_pred CcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccC
Confidence 000 000 012333 356666653321 1499999998
Q ss_pred C--ceeEcccccc-----ccCceEEE--EeCCe---EEEEecCCCeEEEEeccCC
Q 016552 316 D--DWKEVVKSDL-----LKGARHAA--AGGGR---VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 316 ~--~W~~v~~~~~-----~~~~~~~~--~~~g~---i~v~gg~~~~i~~~d~~~~ 358 (387)
+ .|..-..... ......+. ..+|+ +++++..++.++++|..++
T Consensus 285 G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 339 (689)
T 1yiq_A 285 GEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG 339 (689)
T ss_dssp CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred CceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC
Confidence 7 4764322111 11112121 23565 6667667788999998765
No 132
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.10 E-value=0.11 Score=51.59 Aligned_cols=205 Identities=12% Similarity=0.091 Sum_probs=115.1
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccEEEec-cCC--ceeeCCCCCCC--------CcceeEEE--eCCE----EEEEec
Q 016552 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDP-ICR--TWTFGPELVTP--------RRWCAAGC--SRGA----VYVASG 203 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~-~t~--~W~~l~~~p~~--------r~~~~~~~--~~~~----iyv~GG 203 (387)
..++.++.||+.... ...++.+|. .|. .|+.-...+.. ......++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp CCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred ccEEECCEEEEEeCC-------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 345678999997642 135899999 776 58875433211 01112344 5667 887532
Q ss_pred CCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEee-----eCCeEEEEECCCCc--ee
Q 016552 204 IGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNV-----KGAEGAVYDVVANT--WD 276 (387)
Q Consensus 204 ~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg-----~~~~i~~yD~~~~~--W~ 276 (387)
+ ..+.++|..+++.. |+.-..-+...... ...-++.+|++|+-.. ....+..||.++++ |+
T Consensus 130 -d--------g~l~AlDa~TG~~~--W~~~~~~~~~~~~~-~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 130 -D--------GNVAALNAETGETV--WKVENSDIKVGSTL-TIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp -T--------SEEEEEETTTCCEE--EEEECCCGGGTCBC-CSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred -C--------CEEEEEECCCCCEE--EeecCCCCCcccee-ecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 1 26788999988866 88543211100110 1223457999887543 13589999999874 86
Q ss_pred ecccccc------------------------------------cCCCCcEEEEeCCeEEEEeCC---------------C
Q 016552 277 DMREGMV------------------------------------RGWRGPVAAMDEEVLYGIDEN---------------S 305 (387)
Q Consensus 277 ~~~~~~~------------------------------------~~~~~~~~~~~~~~ly~~~~~---------------~ 305 (387)
.-..... ..|...+....++.+|+-.++ .
T Consensus 198 ~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~ 277 (599)
T 1w6s_A 198 AYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWT 277 (599)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTS
T ss_pred EcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCcccc
Confidence 4322110 011122333356777776543 2
Q ss_pred CeEEEEeCCCC--ceeEcccccc-----ccCceEEEE---eCC---eEEEEecCCCeEEEEeccCCCCCCceEE
Q 016552 306 CTLSRYDEVMD--DWKEVVKSDL-----LKGARHAAA---GGG---RVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 306 ~~l~~yd~~~~--~W~~v~~~~~-----~~~~~~~~~---~~g---~i~v~gg~~~~i~~~d~~~~~~~~~W~~ 366 (387)
+.|+++|++++ .|..-..... ......++. .+| ++++.+..+..++++|..+. ...|..
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~lw~~ 349 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDG--ALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTC--CEEEEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCC--CEeecc
Confidence 47999999887 4654222111 111223333 356 56776667788999998754 235654
No 133
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.10 E-value=0.022 Score=51.64 Aligned_cols=187 Identities=10% Similarity=0.001 Sum_probs=98.2
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCc--eeeCCCCCC--CCcceeEE-----EeCCEEEEEecCCCCCCCCCcceE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRT--WTFGPELVT--PRRWCAAG-----CSRGAVYVASGIGSQFSSDVAKSV 216 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~--W~~l~~~p~--~r~~~~~~-----~~~~~iyv~GG~~~~~~~~~~~~v 216 (387)
++..++.|+.+ ..+.+||..+.. ...+..... .+.....+ ..++++++.|+.+. .+
T Consensus 128 ~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~--------~i 192 (357)
T 3i2n_A 128 GAPEIVTGSRD-------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG--------DI 192 (357)
T ss_dssp CCCEEEEEETT-------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS--------EE
T ss_pred CccEEEEEeCC-------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC--------eE
Confidence 45566666533 257889988764 333333222 11222222 13567777766543 78
Q ss_pred EEEECCCCccccCeEEcCCCCCCCccccceEEEEE-----CCEEEEEeeeCCeEEEEECCCCcee-eccccc--ccCCCC
Q 016552 217 EKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW-----KGKLCLVNVKGAEGAVYDVVANTWD-DMREGM--VRGWRG 288 (387)
Q Consensus 217 ~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~-----~g~lyv~gg~~~~i~~yD~~~~~W~-~~~~~~--~~~~~~ 288 (387)
.+||..+.+ -......... ..++.+ ++..++.++.+..+.+||..+..-. .+.... ......
T Consensus 193 ~i~d~~~~~----~~~~~~~~~~------v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v 262 (357)
T 3i2n_A 193 KLFDLRNMA----LRWETNIKNG------VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTV 262 (357)
T ss_dssp EEEETTTTE----EEEEEECSSC------EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCE
T ss_pred EEEECccCc----eeeecCCCCc------eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCE
Confidence 899998887 3322222111 222322 5666667766678899988764211 000000 111112
Q ss_pred cEEEEe-CCe-EEEEeCCCCeEEEEeCCCCc-----------------eeEccccccccCceEEE--EeCCeEEE-EecC
Q 016552 289 PVAAMD-EEV-LYGIDENSCTLSRYDEVMDD-----------------WKEVVKSDLLKGARHAA--AGGGRVCA-VCEN 346 (387)
Q Consensus 289 ~~~~~~-~~~-ly~~~~~~~~l~~yd~~~~~-----------------W~~v~~~~~~~~~~~~~--~~~g~i~v-~gg~ 346 (387)
.+++.. ++. +++.++.++.+.+||.++.. +..+............+ ..+++.++ .|+.
T Consensus 263 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~ 342 (357)
T 3i2n_A 263 WQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF 342 (357)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC
Confidence 233333 345 66777778899999987542 22333332223332223 23566555 5777
Q ss_pred CCeEEEEeccC
Q 016552 347 GGGIVVVDVKA 357 (387)
Q Consensus 347 ~~~i~~~d~~~ 357 (387)
...+.+||+.+
T Consensus 343 d~~i~iw~~~~ 353 (357)
T 3i2n_A 343 DQTVRVLIVTK 353 (357)
T ss_dssp TSEEEEEEECC
T ss_pred CCcEEEEECCC
Confidence 88899999884
No 134
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.09 E-value=0.086 Score=49.98 Aligned_cols=153 Identities=11% Similarity=-0.048 Sum_probs=77.7
Q ss_pred CCE-EEEEecccCCCCCCCCccEEEecc--CCceee-CCCCCCCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEE
Q 016552 146 SGK-LILLAATTHNFNPALTRPLIFDPI--CRTWTF-GPELVTPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 146 ~~~-l~v~GG~~~~~~~~~~~~~vyd~~--t~~W~~-l~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd 220 (387)
++. |++.|+.++ .+.+||.. +..-.. +.....+....+.+ .-+++.++.|+.+. .+.++|
T Consensus 113 d~~~l~~~~~~dg-------~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g--------~v~~~~ 177 (450)
T 2vdu_B 113 DESRLIACADSDK-------SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFG--------DVYSID 177 (450)
T ss_dssp TSSEEEEEEGGGT-------EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS--------EEEEEE
T ss_pred CCCEEEEEECCCC-------eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCC--------cEEEEe
Confidence 344 456776432 57888887 443322 11101111111222 22556666665433 678888
Q ss_pred CCCCccccCeEE--cCCCCCCCccccceEEEEEC---CEEEEEeeeCCeEEEEECCCCceeec-ccccccCCCCcEEEEe
Q 016552 221 LMNGEKNSRWEK--TGELKDGRFSREAIDAVGWK---GKLCLVNVKGAEGAVYDVVANTWDDM-REGMVRGWRGPVAAMD 294 (387)
Q Consensus 221 ~~~~~~~~~W~~--~~~~p~~~~~~~~~~~~~~~---g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~~~~~~~~~~~~ 294 (387)
..+.. -.. ...+... ...-......-+ +++++.++.+..+.+||+.+.+-... ..... ....++++.
T Consensus 178 ~~~~~----~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~--~~v~~~~~s 250 (450)
T 2vdu_B 178 INSIP----EEKFTQEPILGH-VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK--HFVSSICCG 250 (450)
T ss_dssp TTSCC----CSSCCCCCSEEC-SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS--SCEEEEEEC
T ss_pred cCCcc----cccccceeeecc-cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC--CceEEEEEC
Confidence 76665 221 0011100 000012233346 77777777778899999887653321 11011 111233333
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceeE
Q 016552 295 EEVLYGIDENSCTLSRYDEVMDDWKE 320 (387)
Q Consensus 295 ~~~ly~~~~~~~~l~~yd~~~~~W~~ 320 (387)
++.+++.++.++.|.+||..+.+-..
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNLS 276 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEee
Confidence 66677777778899999998876443
No 135
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.09 E-value=0.091 Score=48.87 Aligned_cols=187 Identities=16% Similarity=0.089 Sum_probs=97.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCC-CCcceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVT-PRRWCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
+++.++.|+.+ ..+.+||..+.+-... +.. .....+.+. -+++.++.|+.+. .+.+||..+
T Consensus 134 dg~~l~s~~~d-------~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d~--------~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAED-------RLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGDR--------TVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTT
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCCC--------cEEEEECCC
Confidence 46677776643 3578999988754332 111 111122222 2455666666544 788999988
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeec-ccc--cccCCCC--cEEEE-eC
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDM-REG--MVRGWRG--PVAAM-DE 295 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~--~~~~~~~--~~~~~-~~ 295 (387)
++ -...-...... ...+.. ++++++.++.+..+.+||..++.-... ... ...+... .++++ .+
T Consensus 197 ~~----~~~~~~~~~~v-----~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 197 GQ----CSLTLSIEDGV-----TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp TE----EEEEEECSSCE-----EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred Ce----eEEEEEcCCCc-----EEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 87 44322221110 112222 677777777778899999988753221 110 0011111 22333 25
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceeEccc----------cccccCceE--EEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 296 EVLYGIDENSCTLSRYDEVMDDWKEVVK----------SDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 296 ~~ly~~~~~~~~l~~yd~~~~~W~~v~~----------~~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+++++.++.++.|..||..+..-..... ......... ....+++.++.|+....+.+||..+.
T Consensus 268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 268 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 6666777778899999987642211100 001111111 22235677777777888999998854
No 136
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.16 Score=48.15 Aligned_cols=177 Identities=7% Similarity=-0.137 Sum_probs=90.1
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceee--CCCCCCCC--cceeEEEeC---CEEEEEecCCCCCCCCCcceEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF--GPELVTPR--RWCAAGCSR---GAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~--l~~~p~~r--~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~v~~ 218 (387)
++..++.|+.+ ..++++|..+..... ...+.... .......-+ +++++.|+.+. .+.+
T Consensus 160 ~~~~l~~~~~~-------g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~--------~i~v 224 (450)
T 2vdu_B 160 DDTTVIIADKF-------GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE--------HIKI 224 (450)
T ss_dssp TSSEEEEEETT-------SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS--------CEEE
T ss_pred CCCEEEEEeCC-------CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC--------cEEE
Confidence 45556666532 256888876654332 11111111 112222335 77778777644 7888
Q ss_pred EECCCCccccCeEEc-C-CCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeeccccc--------------
Q 016552 219 WDLMNGEKNSRWEKT-G-ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGM-------------- 282 (387)
Q Consensus 219 yd~~~~~~~~~W~~~-~-~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~-------------- 282 (387)
||..+.. -... . ... ... .+.+.. ++++++.++.+..+.+||..+++-...-...
T Consensus 225 wd~~~~~----~~~~~~~~h~-~~v---~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
T 2vdu_B 225 SHYPQCF----IVDKWLFGHK-HFV---SSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAP 295 (450)
T ss_dssp EEESCTT----CEEEECCCCS-SCE---EEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-
T ss_pred EECCCCc----eeeeeecCCC-Cce---EEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccc
Confidence 9988776 3322 1 111 100 022223 7877777777789999999887642211100
Q ss_pred ---------ccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeC--CC-CceeEccccccccCceEEEEeCCeEEEEecC
Q 016552 283 ---------VRGWRGPVAAMD--EEVLYGIDENSCTLSRYDE--VM-DDWKEVVKSDLLKGARHAAAGGGRVCAVCEN 346 (387)
Q Consensus 283 ---------~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~--~~-~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~ 346 (387)
........++.. +..|++.....+.|.+||. .+ +.+..+...+.......+....+.+++..+.
T Consensus 296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp ---------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECC
T ss_pred ccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEec
Confidence 000111122222 3344444436788999998 33 4555555444332234444455677776543
No 137
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.06 E-value=0.095 Score=46.70 Aligned_cols=186 Identities=12% Similarity=0.074 Sum_probs=101.5
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++.||++... ...+++||+.++.-.... .+ .+....+..-++++|+..+ +.+.+||+.+++
T Consensus 24 ~~~l~~~d~~-------~~~i~~~d~~~~~~~~~~-~~-~~~~~i~~~~dG~l~v~~~----------~~l~~~d~~~g~ 84 (297)
T 3g4e_A 24 SNSLLFVDIP-------AKKVCRWDSFTKQVQRVT-MD-APVSSVALRQSGGYVATIG----------TKFCALNWKEQS 84 (297)
T ss_dssp TTEEEEEETT-------TTEEEEEETTTCCEEEEE-CS-SCEEEEEEBTTSSEEEEET----------TEEEEEETTTTE
T ss_pred CCEEEEEECC-------CCEEEEEECCCCcEEEEe-CC-CceEEEEECCCCCEEEEEC----------CeEEEEECCCCc
Confidence 4678887542 246899999988654432 11 1111222223567777531 267899999988
Q ss_pred cccCeEEcCCCCCCC-ccccceEEEEECCEEEEEeeeC-----------CeEEEEECCCCceeecccccccCCCCcEEEE
Q 016552 226 KNSRWEKTGELKDGR-FSREAIDAVGWKGKLCLVNVKG-----------AEGAVYDVVANTWDDMREGMVRGWRGPVAAM 293 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~-~~~~~~~~~~~~g~lyv~gg~~-----------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~ 293 (387)
+..+...+... ..+.....+--+|++|+..... ..++.+|+.. +...+...... ...+++
T Consensus 85 ----~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~---pngi~~ 156 (297)
T 3g4e_A 85 ----AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI---SNGLDW 156 (297)
T ss_dssp ----EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB---EEEEEE
T ss_pred ----EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc---ccceEE
Confidence 87765433211 1111112222368888854221 3577787753 33332221111 123343
Q ss_pred e--CCeEEEEeCCCCeEEEEeC--CCCceeE---ccccccc-cCceEEE-EeCCeEEEEecCCCeEEEEeccCC
Q 016552 294 D--EEVLYGIDENSCTLSRYDE--VMDDWKE---VVKSDLL-KGARHAA-AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~--~~~ly~~~~~~~~l~~yd~--~~~~W~~---v~~~~~~-~~~~~~~-~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
. ++.||+.+...+.|++||. ++..... +...+.. .....++ --+|.||+....+..|.+||+.+.
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 2 4468998876788999986 4554321 1111111 1122233 346889998777788999999854
No 138
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.05 E-value=0.032 Score=50.96 Aligned_cols=150 Identities=9% Similarity=0.071 Sum_probs=86.7
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++++.+.||.+. .+.+||..++. |.....+..... ....++. -+|++.+.++.+..+.++|..+
T Consensus 27 ~g~~las~~~D~--------~i~iw~~~~~~----~~~~~~~~~~h~--~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR--------RIRIWGTEGDS----WICKSVLSEGHQ--RTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS--------CEEEEEEETTE----EEEEEEECSSCS--SCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred CCCEEEEEcCCC--------eEEEEEcCCCc----ceeeeeeccccC--CcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 566777777654 67889988887 764322211111 1122333 2677777777777889999888
Q ss_pred CceeecccccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCC-ceeEccccccccCceEEE--EeCCeEEEEecCCC
Q 016552 273 NTWDDMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMD-DWKEVVKSDLLKGARHAA--AGGGRVCAVCENGG 348 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~-~W~~v~~~~~~~~~~~~~--~~~g~i~v~gg~~~ 348 (387)
+.+..+...........+++.. ++++++.++.++.+.+||..+. .+..+..+.........+ .-++++++.|+...
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC
Confidence 7665443211111111233332 5667777777889999998764 333333333222222222 33577788877778
Q ss_pred eEEEEeccCC
Q 016552 349 GIVVVDVKAA 358 (387)
Q Consensus 349 ~i~~~d~~~~ 358 (387)
.+.+||..+.
T Consensus 173 ~i~~w~~~~~ 182 (345)
T 3fm0_A 173 TVKLYREEED 182 (345)
T ss_dssp CEEEEEEETT
T ss_pred cEEEEEecCC
Confidence 8999988765
No 139
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.05 E-value=0.046 Score=49.09 Aligned_cols=142 Identities=13% Similarity=0.102 Sum_probs=78.6
Q ss_pred EEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECCCCc
Q 016552 197 AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 197 ~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
.+++.|+.+. .+.+||..+.+ -...-.-... ...++. -++++.+.++.+..+.+||..+..
T Consensus 186 ~~~~s~~~d~--------~i~i~d~~~~~----~~~~~~~h~~-----~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 186 PIIVSCGWDK--------LVKVWNLANCK----LKTNHIGHTG-----YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp CEEEEEETTS--------CEEEEETTTTE----EEEEECCCSS-----CEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cEEEEEcCCC--------EEEEEECCCCc----eeeEecCCCC-----cEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 4556665543 67889988876 4332211111 122232 367777777777789999988764
Q ss_pred eeecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEccccc-------cccCceEE--EEeCCeEEEEec
Q 016552 275 WDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSD-------LLKGARHA--AAGGGRVCAVCE 345 (387)
Q Consensus 275 W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~-------~~~~~~~~--~~~~g~i~v~gg 345 (387)
-...- ........++...+..++.++.++.|.+||.++..-......+ ........ ...+|+.++.|+
T Consensus 249 ~~~~~---~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 249 HLYTL---DGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp EEEEE---ECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred eeeee---cCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 32111 1111122333433334455556788999999876433221111 11112222 234678888888
Q ss_pred CCCeEEEEeccCC
Q 016552 346 NGGGIVVVDVKAA 358 (387)
Q Consensus 346 ~~~~i~~~d~~~~ 358 (387)
..+.|.+||++++
T Consensus 326 ~Dg~v~iW~~~tG 338 (340)
T 4aow_A 326 TDNLVRVWQVTIG 338 (340)
T ss_dssp TTSCEEEEEEEC-
T ss_pred CCCEEEEEeCCCc
Confidence 8888999999864
No 140
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.05 E-value=0.03 Score=51.71 Aligned_cols=193 Identities=13% Similarity=0.053 Sum_probs=99.0
Q ss_pred EEEEEecccCCCCCCCCccEEEeccCCc------eeeCCCCCCC---CcceeEE-E----eCCEE-EEEecCCCCCCCCC
Q 016552 148 KLILLAATTHNFNPALTRPLIFDPICRT------WTFGPELVTP---RRWCAAG-C----SRGAV-YVASGIGSQFSSDV 212 (387)
Q Consensus 148 ~l~v~GG~~~~~~~~~~~~~vyd~~t~~------W~~l~~~p~~---r~~~~~~-~----~~~~i-yv~GG~~~~~~~~~ 212 (387)
.+++.|+.+ ..+.+||..++. +..+...+.. ......+ . -+++. ++.|+.+.
T Consensus 82 ~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg------ 148 (397)
T 1sq9_A 82 CLVATTSFS-------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG------ 148 (397)
T ss_dssp EEEEEEETT-------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS------
T ss_pred cEEEEEcCC-------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC------
Confidence 677776643 358889988876 6666544311 2222222 2 34566 77766543
Q ss_pred cceEEEEECCC------CccccCeEEcCCCC------CCCccccceEEEE-ECCEEEEEeeeCCeEEEEECCCCceeecc
Q 016552 213 AKSVEKWDLMN------GEKNSRWEKTGELK------DGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMR 279 (387)
Q Consensus 213 ~~~v~~yd~~~------~~~~~~W~~~~~~p------~~~~~~~~~~~~~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~ 279 (387)
.+.+||..+ .... .|.....+. ... ......... -++ +++.++.+..+.+||..+.+-...-
T Consensus 149 --~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 149 --TTYIWKFHPFADESNSLTL-NWSPTLELQGTVESPMTP-SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp --CEEEEEEESSSSHHHHTTT-CCCCEEEEEEEECCSSSS-CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred --cEEEEeCCcccccccccee-eccCcceeeeeeccccCC-CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 677888876 3310 011100110 000 000012222 256 5566666678999999876532221
Q ss_pred ccc-cc---CCCCcEEEEe-CCeEEEEeCCC---CeEEEEeCCCCceeEcccccc-----------ccCceEEEE--eCC
Q 016552 280 EGM-VR---GWRGPVAAMD-EEVLYGIDENS---CTLSRYDEVMDDWKEVVKSDL-----------LKGARHAAA--GGG 338 (387)
Q Consensus 280 ~~~-~~---~~~~~~~~~~-~~~ly~~~~~~---~~l~~yd~~~~~W~~v~~~~~-----------~~~~~~~~~--~~g 338 (387)
... .. .....+++.. ++.+++.++.+ +.|.+||..+.+-...-..+. .......+. .++
T Consensus 224 ~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 224 ESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp ECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred eccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 100 00 1112233332 45666666666 789999998764322111100 222322333 357
Q ss_pred eEEEEecCCCeEEEEeccCC
Q 016552 339 RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 339 ~i~v~gg~~~~i~~~d~~~~ 358 (387)
+.++.|+..+.+.+||+.+.
T Consensus 304 ~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 304 ETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp SEEEEEETTSEEEEEETTTT
T ss_pred CEEEEEeCCCeEEEEEcCCC
Confidence 88888888889999999854
No 141
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.05 E-value=0.095 Score=49.16 Aligned_cols=176 Identities=10% Similarity=0.077 Sum_probs=96.1
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEE--EeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAG--CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
.++++|..|++-.++-.+........++ .-+++.++.|+.+. .+.+||..+++ -.....-...
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg--------~v~iWd~~~~~----~~~~~~~h~~--- 190 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQQK----RLRNMTSHSA--- 190 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTE----EEEEECCCSS---
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC--------eEEEEEcCCCc----EEEEEeCCCC---
Confidence 6899999998776654443322222222 23667777777654 78999998887 3322211111
Q ss_pred ccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCc--ee
Q 016552 243 REAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSCTLSRYDEVMDD--WK 319 (387)
Q Consensus 243 ~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~~~ly~~~~~~~~l~~yd~~~~~--W~ 319 (387)
...+...++.+.+.++.+..+..+|................ ...... ..++..++.++.++.+.+||..+.. +.
T Consensus 191 --~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~-~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~ 267 (420)
T 4gga_A 191 --RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV 267 (420)
T ss_dssp --CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC
T ss_pred --ceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccccc-ceeeeeecCCCCeeeeeeccccceEEeeccccccce
Confidence 13455667887777777778889988765432211000000 011111 2245666666677889999987653 22
Q ss_pred EccccccccCceEEEE---eCCeEEEEecC--CCeEEEEeccCC
Q 016552 320 EVVKSDLLKGARHAAA---GGGRVCAVCEN--GGGIVVVDVKAA 358 (387)
Q Consensus 320 ~v~~~~~~~~~~~~~~---~~g~i~v~gg~--~~~i~~~d~~~~ 358 (387)
.+.............. .++.++.++++ ...|.+||+.+.
T Consensus 268 ~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 268 PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp CSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT
T ss_pred eeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc
Confidence 2222222222222222 24556655443 467889998865
No 142
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.04 E-value=0.11 Score=47.67 Aligned_cols=170 Identities=13% Similarity=-0.000 Sum_probs=98.8
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCC--CCCCC
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGE--LKDGR 240 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~--~p~~~ 240 (387)
.+.++++.......+.+- .....+.+. .+++||+.--. ...+..+++.... -..+.. +..+.
T Consensus 54 ~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~~--------~~~I~r~~~~g~~----~~~~~~~~~~~p~ 119 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVT--------LDRILRANLNGSN----VEEVVSTGLESPG 119 (349)
T ss_dssp CEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCS----CEEEECSSCSCCC
T ss_pred ceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEecc--------CCceEEEecCCCC----ceEEEeCCCCCcc
Confidence 467777777666553221 111122222 35789987422 2478889988766 554422 21111
Q ss_pred ccccceEEEE-ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCC-cEEEEe--CCeEEEEeCCC-CeEEEEeCCC
Q 016552 241 FSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRG-PVAAMD--EEVLYGIDENS-CTLSRYDEVM 315 (387)
Q Consensus 241 ~~~~~~~~~~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~~--~~~ly~~~~~~-~~l~~yd~~~ 315 (387)
..++- .++.||+.......|.++|+....-..+.. ..... ..+++. ++.||+.+... +.|+++|++.
T Consensus 120 -----glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~---~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 120 -----GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp -----EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred -----EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe---CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 22222 378999987666789999987654333221 11112 234444 78999998665 7899999987
Q ss_pred CceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccC
Q 016552 316 DDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 316 ~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
..=+.+.. .....+.+++. .+++||+.-.....|..+|++.
T Consensus 192 ~~~~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 192 SGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp CSCEESCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCcEEEEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 64444322 12222333333 4688988866677888888774
No 143
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.015 Score=59.62 Aligned_cols=149 Identities=8% Similarity=0.044 Sum_probs=89.1
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--C--CEEEEEeeeCCeEEEEEC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~--g~lyv~gg~~~~i~~yD~ 270 (387)
+++.++.||.+. .+.+||...++ +..+..+..... ...++.+ + +.+.+.++.+..+.+||.
T Consensus 20 dg~~latg~~dg--------~I~vwd~~~~~----~~~~~~l~~h~~---~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSDK--------TIKIFEVEGET----HKLIDTLTGHEG---PVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp SSCCEEEEETTT--------EEEEEEEETTE----EEEEEEECCCSS---CEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEECCC--------cEEEEecCCCC----CccceeccCCcC---ceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 455666666544 78889988777 766554432211 1333333 3 667777777778999999
Q ss_pred CCCceeecccccccCCCCcEEEEe-C--CeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEe-----------
Q 016552 271 VANTWDDMREGMVRGWRGPVAAMD-E--EVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAG----------- 336 (387)
Q Consensus 271 ~~~~W~~~~~~~~~~~~~~~~~~~-~--~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~----------- 336 (387)
.++.|..+...........+++.. + +.+++.++.++.+.+||..+..-...............+..
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 999876665422222122333333 2 56777777789999999987632222211122222222222
Q ss_pred ----CCeEEEEecCCCeEEEEeccCC
Q 016552 337 ----GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 337 ----~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++..++.|+..+.|.+||+.+.
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETT
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCC
Confidence 3678888888888999998754
No 144
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.02 E-value=0.011 Score=63.84 Aligned_cols=185 Identities=11% Similarity=0.023 Sum_probs=103.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++..+++|+.+ ..+.+||..+.+......-........+..-+++..+.|+.+. .+.+||..+++
T Consensus 972 ~g~~l~~g~~~-------g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg--------~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 972 HLEYVAFGDED-------GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDS--------VIQVWNWQTGD 1036 (1249)
T ss_dssp TSSEEEEEETT-------SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSS--------BEEEEETTTTE
T ss_pred CCCEEEEEcCC-------CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCc
Confidence 44556666532 3578899887654432111111112222233566677776544 78899999888
Q ss_pred cccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEE-EeCCeEEEEeCC
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDEN 304 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~~~ly~~~~~ 304 (387)
........... .......+..++.++.+..+.+||..+++-...-.... + ...+++ ..++++++.++.
T Consensus 1037 ----~~~~~~~~~~v-----~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~-~v~~~~~s~d~~~l~s~s~ 1105 (1249)
T 3sfz_A 1037 ----YVFLQAHQETV-----KDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQ-G-TVLSCAISSDATKFSSTSA 1105 (1249)
T ss_dssp ----EECCBCCSSCE-----EEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCS-S-CCCCEEECSSSSSCEEECC
T ss_pred ----eEEEecCCCcE-----EEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccC-C-cEEEEEECCCCCEEEEEcC
Confidence 65443222111 22233333334555556789999998875322111011 1 112222 235666777777
Q ss_pred CCeEEEEeCCCCceeEccccccccCceE--EEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 305 SCTLSRYDEVMDDWKEVVKSDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 305 ~~~l~~yd~~~~~W~~v~~~~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++.+..||..+.. .+..+........ ....+|++++.|+..+.|.+||+.+.
T Consensus 1106 d~~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1106 DKTAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159 (1249)
T ss_dssp SSCCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSS
T ss_pred CCcEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 8899999987654 2222222223322 23447888888888888999999864
No 145
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.01 E-value=0.19 Score=45.60 Aligned_cols=180 Identities=12% Similarity=-0.008 Sum_probs=107.1
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCc---eeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRT---WTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~---W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd 220 (387)
++.||+.-- ....++++++.+.. +.....+..+. ..++ .+++||+.-.. ...++++|
T Consensus 46 ~~~lyw~D~-------~~~~I~r~~~~g~~~~~~~~~~~l~~p~---glavd~~~g~ly~~d~~--------~~~I~~~~ 107 (318)
T 3sov_A 46 HGLIYWSDV-------SEEAIKRTEFNKTESVQNVVVSGLLSPD---GLACDWLGEKLYWTDSE--------TNRIEVSN 107 (318)
T ss_dssp GTEEEEEET-------TTTEEEEEETTSSSCCCEEEEECCSCCC---EEEEETTTTEEEEEETT--------TTEEEEEE
T ss_pred CCEEEEEEC-------CCCcEEEEEccCCCceEEEEcCCCCCcc---EEEEEcCCCeEEEEECC--------CCEEEEEE
Confidence 578888743 22467888887652 11111111111 2232 47899997432 24788898
Q ss_pred CCCCccccCeEEcC--CCCCCCccccceEEEEE---CCEEEEEee-eCCeEEEEECCCCceeecccccccCCCC-cEEEE
Q 016552 221 LMNGEKNSRWEKTG--ELKDGRFSREAIDAVGW---KGKLCLVNV-KGAEGAVYDVVANTWDDMREGMVRGWRG-PVAAM 293 (387)
Q Consensus 221 ~~~~~~~~~W~~~~--~~p~~~~~~~~~~~~~~---~g~lyv~gg-~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~ 293 (387)
+.... -..+. .+..+ ...++ +|.||+... ....|+++|+....=+.+.. .+... .++++
T Consensus 108 ~dG~~----~~~l~~~~~~~P-------~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~---~~l~~Pnglav 173 (318)
T 3sov_A 108 LDGSL----RKVLFWQELDQP-------RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN---SEIYWPNGLTL 173 (318)
T ss_dssp TTSCS----CEEEECSSCSSE-------EEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC---SSCSCEEEEEE
T ss_pred CCCCc----EEEEEeCCCCCc-------cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE---CCCCCccEEEE
Confidence 87654 33332 22211 23233 588998863 34689999987533222211 11111 24454
Q ss_pred e--CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 294 D--EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
. +++||+.+...+.|+++|.+...=+.+.. .....+.+++..++.+|+.-..+..|..+|..++
T Consensus 174 d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 174 DYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred eccCCEEEEEECCCCEEEEEcCCCCceEEEec-CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 3 78999999878899999998654343332 1234456677778999999777889999998644
No 146
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.99 E-value=0.077 Score=49.57 Aligned_cols=170 Identities=13% Similarity=0.003 Sum_probs=98.7
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCC--CCCCC
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGE--LKDGR 240 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~--~p~~~ 240 (387)
.+.++|+.+.....+.+- .....+.+. .+++||+.--. ...+..+++.... ...+.. +..+.
T Consensus 97 ~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~~--------~~~I~r~~~~g~~----~~~~~~~~~~~p~ 162 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVT--------LDRILRANLNGSN----VEEVVSTGLESPG 162 (386)
T ss_dssp CEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCC----EEEEECSSCSCCC
T ss_pred cceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeCC--------CCcEEEEecCCCC----cEEEEeCCCCCcc
Confidence 567778777665554321 111122222 35789997422 2478889988776 555432 21111
Q ss_pred ccccceEEEE-ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCC-cEEEEe--CCeEEEEeCCC-CeEEEEeCCC
Q 016552 241 FSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRG-PVAAMD--EEVLYGIDENS-CTLSRYDEVM 315 (387)
Q Consensus 241 ~~~~~~~~~~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~~--~~~ly~~~~~~-~~l~~yd~~~ 315 (387)
..++- .++.||+.......|.++|+....-..+.. ..... ..+++. ++.||+.+... +.|++++++.
T Consensus 163 -----glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~---~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 163 -----GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp -----CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred -----EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec---CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 12222 478999987666789999987654332221 11112 234444 78999998655 7899999987
Q ss_pred CceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccC
Q 016552 316 DDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 316 ~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
..=+.+... ....+..++. .+++||+.-.....|..+|.+.
T Consensus 235 ~~~~~~~~~-~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 235 SGRRIIADT-HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp CSCEEEECS-SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCcEEEEEC-CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 643333221 1222333333 4688888866677888888764
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.98 E-value=0.016 Score=52.16 Aligned_cols=178 Identities=11% Similarity=0.004 Sum_probs=88.7
Q ss_pred ccEEEecc-CCceeeCCCCCCCCc-ceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECC--CCccccCeEEcCCCCCC
Q 016552 165 RPLIFDPI-CRTWTFGPELVTPRR-WCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLM--NGEKNSRWEKTGELKDG 239 (387)
Q Consensus 165 ~~~vyd~~-t~~W~~l~~~p~~r~-~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~--~~~~~~~W~~~~~~p~~ 239 (387)
.+.+||.. +++.+.+...+.... ...+..-++ .||+.+..+ ..+.+||.. +++ +..+..++..
T Consensus 16 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--------~~v~~~~~~~~~~~----~~~~~~~~~~ 83 (343)
T 1ri6_A 16 QIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--------FRVLAYRIAPDDGA----LTFAAESALP 83 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--------TEEEEEEECTTTCC----EEEEEEEECS
T ss_pred eEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--------CeEEEEEecCCCCc----eeeccccccC
Confidence 57778774 445544332222221 112222244 466654321 367787776 666 7765543322
Q ss_pred CccccceEEEEECCE-EEEEeeeCCeEEEEECCCCc-eeecccccccCCCCcEEEE--eCCeEEEEeCCCCeEEEEeCCC
Q 016552 240 RFSREAIDAVGWKGK-LCLVNVKGAEGAVYDVVANT-WDDMREGMVRGWRGPVAAM--DEEVLYGIDENSCTLSRYDEVM 315 (387)
Q Consensus 240 ~~~~~~~~~~~~~g~-lyv~gg~~~~i~~yD~~~~~-W~~~~~~~~~~~~~~~~~~--~~~~ly~~~~~~~~l~~yd~~~ 315 (387)
... ...+..-+|+ +|+.+..+..+.+||+..+. ...+.. .........+++ .++.||+.+...+.+.+||.++
T Consensus 84 ~~~--~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 84 GSL--THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV-VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp SCC--SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE-ECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCC--cEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccc-ccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 111 1222233555 65555444678999884221 222211 111111122233 2446777664578899999987
Q ss_pred -CceeEcc--cccc--ccCceEE-EEeCCe-EEEEecCCCeEEEEeccC
Q 016552 316 -DDWKEVV--KSDL--LKGARHA-AAGGGR-VCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 316 -~~W~~v~--~~~~--~~~~~~~-~~~~g~-i~v~gg~~~~i~~~d~~~ 357 (387)
++...+. .... ......+ ..-+|+ +|+.+...+.+.+||+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 6665433 2111 1112222 233555 667766778899999863
No 148
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.98 E-value=0.11 Score=47.03 Aligned_cols=184 Identities=9% Similarity=-0.010 Sum_probs=96.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEE---EeCCEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAG---CSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~---~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
++..++.|+.+ ..+.+||..+.+-..+.... ......+ ..++++++.|+.+. .+.+||..
T Consensus 97 ~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~dg--------~i~vwd~~ 159 (368)
T 3mmy_A 97 DGSKVFTASCD-------KTAKMWDLSSNQAIQIAQHD--APVKTIHWIKAPNYSCVMTGSWDK--------TLKFWDTR 159 (368)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEEEECS--SCEEEEEEEECSSCEEEEEEETTS--------EEEEECSS
T ss_pred CCCEEEEEcCC-------CcEEEEEcCCCCceeecccc--CceEEEEEEeCCCCCEEEEccCCC--------cEEEEECC
Confidence 45566666533 36889999888766533211 1112222 23567777777654 78899988
Q ss_pred CCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc--eeecccccccCCCCcEEEE-eCC---
Q 016552 223 NGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT--WDDMREGMVRGWRGPVAAM-DEE--- 296 (387)
Q Consensus 223 ~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~--W~~~~~~~~~~~~~~~~~~-~~~--- 296 (387)
+.+ -...-..+.. ..........+ +++..+..+.+||..... +..+.. .........++ .+.
T Consensus 160 ~~~----~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 227 (368)
T 3mmy_A 160 SSN----PMMVLQLPER-----CYCADVIYPMA-VVATAERGLIVYQLENQPSEFRRIES--PLKHQHRCVAIFKDKQNK 227 (368)
T ss_dssp CSS----CSEEEECSSC-----EEEEEEETTEE-EEEEGGGCEEEEECSSSCEEEEECCC--SCSSCEEEEEEEECTTSC
T ss_pred CCc----EEEEEecCCC-----ceEEEecCCee-EEEeCCCcEEEEEeccccchhhhccc--cccCCCceEEEcccCCCC
Confidence 776 2221111111 12233344444 444444578999987653 333322 11111122221 111
Q ss_pred -eEEEEeCCCCeEEEEeCCCCce-eEcccccccc------------CceEEE--EeCCeEEEEecCCCeEEEEeccCC
Q 016552 297 -VLYGIDENSCTLSRYDEVMDDW-KEVVKSDLLK------------GARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 297 -~ly~~~~~~~~l~~yd~~~~~W-~~v~~~~~~~------------~~~~~~--~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
..++.+..++.+..||.....- ..+....... .....+ ..++++++.|+..+.|.+||+.+.
T Consensus 228 ~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 228 PTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp EEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred CCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC
Confidence 2356666788999999877522 1111111110 022222 236778888888888999999864
No 149
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.95 E-value=0.037 Score=49.32 Aligned_cols=176 Identities=13% Similarity=0.033 Sum_probs=95.1
Q ss_pred CccEEEeccCCceeeCCCC--C-CCCcceeEEE-eC-CEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEc-CCCC
Q 016552 164 TRPLIFDPICRTWTFGPEL--V-TPRRWCAAGC-SR-GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKT-GELK 237 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~--p-~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~-~~~p 237 (387)
..+++||+.+++++.+... . ........+. -+ +++|+.... +.+.+||+. ++ ...+ ....
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~---------~~l~~~d~~-g~----~~~~~~~~~ 111 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR---------LGLLVVQTD-GT----FEEIAKKDS 111 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT---------TEEEEEETT-SC----EEECCSBCT
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC---------CCEEEEeCC-CC----EEEEEeccC
Confidence 3689999988888764320 0 0011112222 35 789987531 257889998 77 6655 3221
Q ss_pred CCC-ccccceEEEEECCEEEEEeeeC---------------CeEEEEECCCCceeecccccccCCCCcEEEEe-----CC
Q 016552 238 DGR-FSREAIDAVGWKGKLCLVNVKG---------------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-----EE 296 (387)
Q Consensus 238 ~~~-~~~~~~~~~~~~g~lyv~gg~~---------------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-----~~ 296 (387)
... .......++--+|++|+..... ..+..||+. ++...+..... . ...+++. ++
T Consensus 112 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~--~-~~~i~~~~~~d~dg 187 (314)
T 1pjx_A 112 EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ--F-PNGIAVRHMNDGRP 187 (314)
T ss_dssp TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES--S-EEEEEEEECTTSCE
T ss_pred CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC--C-cceEEEecccCCCC
Confidence 111 1101122222368899876432 468889987 55544322111 1 1233333 34
Q ss_pred -eEEEEeCCCCeEEEEeCC-CCceeEcc---ccccc--cCceEEE-EeCCeEEEEecCCCeEEEEeccC
Q 016552 297 -VLYGIDENSCTLSRYDEV-MDDWKEVV---KSDLL--KGARHAA-AGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 297 -~ly~~~~~~~~l~~yd~~-~~~W~~v~---~~~~~--~~~~~~~-~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
.||+.+...+.|++||.+ ++...... ..+.. .....++ .-+|.+|+....++.|.+||+.+
T Consensus 188 ~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~ 256 (314)
T 1pjx_A 188 YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG 256 (314)
T ss_dssp EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred CEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 588887667889999976 34332211 11111 1122222 34688888866677899999873
No 150
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.94 E-value=0.013 Score=55.56 Aligned_cols=145 Identities=7% Similarity=-0.047 Sum_probs=82.5
Q ss_pred CEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEE---ECCEEEEEeeeCCeEEEEECCC
Q 016552 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG---WKGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~---~~g~lyv~gg~~~~i~~yD~~~ 272 (387)
+++.+.|+.+. .|.+||..+.. -..+-.+..... ...++. .++.+.+.++.+..+.++|.++
T Consensus 132 ~~~lasGs~dg--------~i~lWd~~~~~----~~~~~~~~gH~~---~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 132 PSTVAVGSKGG--------DIMLWNFGIKD----KPTFIKGIGAGG---SITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp TTCEEEEETTS--------CEEEECSSCCS----CCEEECCCSSSC---CCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CCEEEEEeCCC--------EEEEEECCCCC----ceeEEEccCCCC---CEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 45666666544 67888887766 332221111100 122332 2566666666667899999988
Q ss_pred CceeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEe--C-CeEEEEecCCC
Q 016552 273 NTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAG--G-GRVCAVCENGG 348 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~--~-g~i~v~gg~~~ 348 (387)
+.-..+...........++++ .++.+++.++.++.|..||.++.. +..+.........+.. + ..+++.|+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 197 NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETTS
T ss_pred CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCcc
Confidence 766544321111111223333 366777888888999999997653 2222223333333333 3 44777777778
Q ss_pred eEEEEeccCC
Q 016552 349 GIVVVDVKAA 358 (387)
Q Consensus 349 ~i~~~d~~~~ 358 (387)
.|.+||+.+.
T Consensus 274 ~v~iwd~~~~ 283 (435)
T 4e54_B 274 TVKIWDLRQV 283 (435)
T ss_dssp BCCEEETTTC
T ss_pred eeeEEecccc
Confidence 8999998754
No 151
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.94 E-value=0.13 Score=48.82 Aligned_cols=194 Identities=9% Similarity=-0.044 Sum_probs=98.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCC----ceeeCC-------CCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICR----TWTFGP-------ELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAK 214 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~----~W~~l~-------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 214 (387)
..+||+-|.. .+.++++|..++ +-.+.- .....+.+...+.-++ |||..-.+. ++..-.
T Consensus 95 r~~l~v~~l~-------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~--~g~~~g 164 (462)
T 2ece_A 95 RRFLIVPGLR-------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNE--EGEGPG 164 (462)
T ss_dssp SCEEEEEBTT-------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEET--TSCSCC
T ss_pred CCEEEEccCC-------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCc--CCCCCC
Confidence 3456665542 257999998877 322211 1111232333444566 877432221 223346
Q ss_pred eEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEee-------------------eCCeEEEEECCCCce
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNV-------------------KGAEGAVYDVVANTW 275 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg-------------------~~~~i~~yD~~~~~W 275 (387)
.+.++|.+|.+...+|..- ..+.. +. ......-++++++... +++.+.+||..+++
T Consensus 165 ~v~vlD~~T~~v~~~~~~~-~~~~~-~~--Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k- 239 (462)
T 2ece_A 165 GILMLDHYSFEPLGKWEID-RGDQY-LA--YDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK- 239 (462)
T ss_dssp EEEEECTTTCCEEEECCSB-CTTCC-CC--CCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE-
T ss_pred eEEEEECCCCeEEEEEccC-CCCcc-cc--ceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc-
Confidence 8999999988733334311 11111 11 0011122444444442 24789999998753
Q ss_pred eecccccccCCC--CcE-EEE----eCCeEEEEeC-----CCCeEEEEeCCCCceeEcccc--cc---------------
Q 016552 276 DDMREGMVRGWR--GPV-AAM----DEEVLYGIDE-----NSCTLSRYDEVMDDWKEVVKS--DL--------------- 326 (387)
Q Consensus 276 ~~~~~~~~~~~~--~~~-~~~----~~~~ly~~~~-----~~~~l~~yd~~~~~W~~v~~~--~~--------------- 326 (387)
.+.. ...+.. .+. +.+ .+..+|+... -++.|++|..+.+.|..+... +.
T Consensus 240 -~~~t-I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~ 317 (462)
T 2ece_A 240 -RIHS-LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFK 317 (462)
T ss_dssp -EEEE-EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGT
T ss_pred -EeeE-EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccc
Confidence 2222 222111 111 111 2456888776 566777765555778765521 11
Q ss_pred ---ccCceEEEEeCCe-EEEEecCCCeEEEEecc
Q 016552 327 ---LKGARHAAAGGGR-VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 327 ---~~~~~~~~~~~g~-i~v~gg~~~~i~~~d~~ 356 (387)
.......+..+|+ ||+-..+.+.|.+||++
T Consensus 318 ~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 318 AVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 1112323444555 77776777899999986
No 152
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.94 E-value=0.075 Score=48.90 Aligned_cols=143 Identities=9% Similarity=-0.025 Sum_probs=83.8
Q ss_pred EEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEE-EE--CCEEEEEeeeCCeEEEEECCCC
Q 016552 197 AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAV-GW--KGKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 197 ~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~-~~--~g~lyv~gg~~~~i~~yD~~~~ 273 (387)
++++.|+.+. .+.+||..+.+ ............ ...++ .. ++.+.+.++.+..+.++|..+.
T Consensus 87 ~~l~s~~~dg--------~i~iwd~~~~~----~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG--------DIILWDYDVQN----KTSFIQGMGPGD---AITGMKFNQFNTNQLFVSSIRGATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS--------CEEEEETTSTT----CEEEECCCSTTC---BEEEEEEETTEEEEEEEEETTTEEEEEETTSC
T ss_pred CEEEEEcCCC--------eEEEEeCCCcc----cceeeecCCcCC---ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC
Confidence 5777776544 78899999887 655433211111 12233 33 3466666666678999999987
Q ss_pred ceeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEE--eCCe-EEEEecCCCe
Q 016552 274 TWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA--GGGR-VCAVCENGGG 349 (387)
Q Consensus 274 ~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~g~-i~v~gg~~~~ 349 (387)
....+...........+++. .++.+++.++.++.+..||.....-..+. ........+. -+++ +++.|+....
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEK---LHKAKVTHAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEE---CSSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEec---cCCCcEEEEEECCCCCCEEEEEeCCCE
Confidence 66555431111111122332 35566777777889999999654332222 2222222232 3455 8888888889
Q ss_pred EEEEeccC
Q 016552 350 IVVVDVKA 357 (387)
Q Consensus 350 i~~~d~~~ 357 (387)
+.+||+.+
T Consensus 229 i~iwd~~~ 236 (383)
T 3ei3_B 229 VKLWDLRN 236 (383)
T ss_dssp EEEEEGGG
T ss_pred EEEEeCCC
Confidence 99999986
No 153
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.1 Score=47.16 Aligned_cols=198 Identities=11% Similarity=-0.008 Sum_probs=95.6
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++..++.++.+ ..+.+||..+.+-...-....+ .......-+++.+++++.+. ......+.+||..+..
T Consensus 85 ~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~~~---~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 85 FTKYCVTGSAD-------YSIKLWDVSNGQCVATWKSPVP-VKRVEFSPCGNYFLAILDNV---MKNPGSINIYEIERDS 153 (369)
T ss_dssp TSSEEEEEETT-------TEEEEEETTTCCEEEEEECSSC-EEEEEECTTSSEEEEEECCB---TTBCCEEEEEEEEECT
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEeecCCC-eEEEEEccCCCEEEEecCCc---cCCCCEEEEEEecCCc
Confidence 35566666643 3688999887765443221111 11112222455556555431 1122367778776654
Q ss_pred cccCeEEcCCCCCCCcc--c--cceEEEE--ECCEEEEEeeeCCeEEEEECCCC-ce-eecccccccCCCCcEEEEe-CC
Q 016552 226 KNSRWEKTGELKDGRFS--R--EAIDAVG--WKGKLCLVNVKGAEGAVYDVVAN-TW-DDMREGMVRGWRGPVAAMD-EE 296 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~--~--~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~-~W-~~~~~~~~~~~~~~~~~~~-~~ 296 (387)
....+......+..... . ....++. -++++.+.++.+..+.+||+.++ .- ..+.. ......+++.. ++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL---HEKSISDMQFSPDL 230 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC---CSSCEEEEEECTTS
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec---CCCceeEEEECCCC
Confidence 21112222111110000 0 0122222 25666666666678999999873 32 12211 11111233332 55
Q ss_pred eEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCC--------------eEEEEeccCC
Q 016552 297 VLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGG--------------GIVVVDVKAA 358 (387)
Q Consensus 297 ~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~--------------~i~~~d~~~~ 358 (387)
.+++.+..++.|.+||..+..-........ .........+++.+++++... .+.+||..+.
T Consensus 231 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 305 (369)
T 3zwl_B 231 TYFITSSRDTNSFLVDVSTLQVLKKYETDC-PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE 305 (369)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECSS-CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC
T ss_pred CEEEEecCCceEEEEECCCCceeeeecCCC-CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC
Confidence 666666678899999998765443322111 111222334556666655433 6778887644
No 154
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.92 E-value=0.16 Score=51.25 Aligned_cols=198 Identities=17% Similarity=0.189 Sum_probs=111.4
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccEEEeccCC--ceeeCCCCCCCC--------cceeEEEeCCEEEEEecCCCCCCC
Q 016552 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTPR--------RWCAAGCSRGAVYVASGIGSQFSS 210 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~--~W~~l~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~ 210 (387)
..++.++.||+.... ..++.+|..|. .|+.-...+... .....++.+++||+... +
T Consensus 61 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d----- 126 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW--------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-D----- 126 (668)
T ss_dssp CCEEETTEEEEEEGG--------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-T-----
T ss_pred CCEEECCEEEEECCC--------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-C-----
Confidence 345678999987652 25788998876 588744322110 11234567889988532 1
Q ss_pred CCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeee-----CCeEEEEECCCCc--eeeccc-cc
Q 016552 211 DVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVANT--WDDMRE-GM 282 (387)
Q Consensus 211 ~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~-----~~~i~~yD~~~~~--W~~~~~-~~ 282 (387)
..+.++|..+++.. |+.-..-+..... .....++.++++|+..+. ...+.+||.++++ |+.-.. ..
T Consensus 127 ---g~l~alD~~tG~~~--W~~~~~~~~~~~~-~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 200 (668)
T 1kv9_A 127 ---GRLIALDAKTGKAI--WSQQTTDPAKPYS-ITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGD 200 (668)
T ss_dssp ---SEEEEEETTTCCEE--EEEECSCTTSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCC
T ss_pred ---CEEEEEECCCCCEe--eeeccCCCCCcce-ecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCC
Confidence 36889999988866 8865421111111 112335679999876432 2579999998874 865311 01
Q ss_pred ccC-------------CCC-------------cEEEE--eCCeEEEEeCCC------------------CeEEEEeCCCC
Q 016552 283 VRG-------------WRG-------------PVAAM--DEEVLYGIDENS------------------CTLSRYDEVMD 316 (387)
Q Consensus 283 ~~~-------------~~~-------------~~~~~--~~~~ly~~~~~~------------------~~l~~yd~~~~ 316 (387)
+.. +.+ ...++ .++.+|+-.++. +.|+++|++++
T Consensus 201 p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG 280 (668)
T 1kv9_A 201 PALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTG 280 (668)
T ss_dssp TTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC
T ss_pred CCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCC
Confidence 100 000 12233 346676654321 25999999887
Q ss_pred --ceeEcccccc-----ccCceEE--EEeCCe---EEEEecCCCeEEEEeccCC
Q 016552 317 --DWKEVVKSDL-----LKGARHA--AAGGGR---VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 317 --~W~~v~~~~~-----~~~~~~~--~~~~g~---i~v~gg~~~~i~~~d~~~~ 358 (387)
.|+.-..... ......+ ...+|+ +++++..++.++++|..++
T Consensus 281 ~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 281 KLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred ceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC
Confidence 4765322111 1112222 234676 5666667788999998765
No 155
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.92 E-value=0.05 Score=50.16 Aligned_cols=105 Identities=6% Similarity=-0.139 Sum_probs=59.0
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeeccccc--ccCCC--CcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEccccccc
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGM--VRGWR--GPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLL 327 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~--~~~~~--~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~ 327 (387)
+++..+.++.+..+.+||..+.+-....... ..... ........+..+++...++.+.+||..+..-. ..+...
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~--~~~~~~ 333 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI--TMLKGH 333 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE--EEECCC
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce--eeeccC
Confidence 6666667776678999999877533221100 00101 11111222233444445678999998776432 222222
Q ss_pred cCc--eEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 328 KGA--RHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 328 ~~~--~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
... ......++++++.|+..+.+.+||+.+.
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 222 2233446788888888888999999865
No 156
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.92 E-value=0.14 Score=46.20 Aligned_cols=191 Identities=10% Similarity=0.094 Sum_probs=97.0
Q ss_pred EEEEecccCCCCCCCCccEEEeccCCceeeCCCCC---CCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 149 LILLAATTHNFNPALTRPLIFDPICRTWTFGPELV---TPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 149 l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p---~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
+++.|+.+ ..+.+||..++....+..+. ......+.+ .-++++++.|+.+. .+.+||....
T Consensus 26 ~las~~~D-------~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~--------~v~iw~~~~~ 90 (330)
T 2hes_X 26 ILATGSTD-------RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS--------TVSIWAKEES 90 (330)
T ss_dssp EEEEEESS-------SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS--------CEEEEEC---
T ss_pred EEEEEcCC-------CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC--------cEEEEEcccC
Confidence 55666533 35788888876544332221 111111122 22567777777654 6778887532
Q ss_pred ccc-cCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCC--CceeecccccccCCCCcEEEE-eCCeE
Q 016552 225 EKN-SRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA--NTWDDMREGMVRGWRGPVAAM-DEEVL 298 (387)
Q Consensus 225 ~~~-~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~--~~W~~~~~~~~~~~~~~~~~~-~~~~l 298 (387)
... ..+..+..+.... ....++.+ +|++.+.++.+..+.++|... ..+..+...........+++. .++.+
T Consensus 91 ~~~~~~~~~~~~~~~h~---~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 167 (330)
T 2hes_X 91 ADRTFEMDLLAIIEGHE---NEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEAL 167 (330)
T ss_dssp ----CCCEEEEEEC-------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSE
T ss_pred cCccccceeEEEEcCCC---CcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCE
Confidence 100 0033222111110 01222322 577666777677899999843 234333210000111122332 25566
Q ss_pred EEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEe--C--CeEEEEecCCCeEEEEeccC
Q 016552 299 YGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAG--G--GRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 299 y~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~--~--g~i~v~gg~~~~i~~~d~~~ 357 (387)
++.++.++.+..||..++.|..+..+.........+.. + +..++.|+....|-+||+.+
T Consensus 168 l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 168 LASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred EEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 77777788999999988888776655443333323332 2 34566666677788888753
No 157
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.91 E-value=0.15 Score=47.20 Aligned_cols=180 Identities=7% Similarity=-0.007 Sum_probs=98.0
Q ss_pred ccEEEeccCCceeeCC--CCCCCCc--ceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCC
Q 016552 165 RPLIFDPICRTWTFGP--ELVTPRR--WCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKD 238 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~--~~p~~r~--~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~ 238 (387)
.+.+||..+++-...- ..+.... ....+. .++.+++.|+.+. .+.+||....... -..+.....
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--------~v~~wd~~~~~~~--~~~~~~h~~ 250 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT--------TVRLWDLRITSRA--VRTYHGHEG 250 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS--------CEEEEETTTTCCC--CEEECCCSS
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC--------eEEEEECCCCCcc--eEEECCcCC
Confidence 5788898887644321 1111111 111111 2567888887755 7788998643200 222221111
Q ss_pred CCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccc---cC-C-CCcEEEE-eCCeEEEEeCCCCeEEEEe
Q 016552 239 GRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMV---RG-W-RGPVAAM-DEEVLYGIDENSCTLSRYD 312 (387)
Q Consensus 239 ~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~---~~-~-~~~~~~~-~~~~ly~~~~~~~~l~~yd 312 (387)
. . ...+..-++..++.++.+..+.++|+.++.-...-...+ .. . ...++++ .+|++++.+..++.+.+||
T Consensus 251 ~-v---~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd 326 (380)
T 3iz6_a 251 D-I---NSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWD 326 (380)
T ss_dssp C-C---CEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEE
T ss_pred C-e---EEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEE
Confidence 1 1 011222367777777777889999998875322111000 00 0 1123333 3667777787789999999
Q ss_pred CCCCceeE-cccc-ccccCc--eEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 313 EVMDDWKE-VVKS-DLLKGA--RHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 313 ~~~~~W~~-v~~~-~~~~~~--~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
..+.+-.. +... ...... ......+|+.++.|+....+.+||++..
T Consensus 327 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 327 TLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp TTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 87765432 2121 112222 3233457888888888889999998853
No 158
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.91 E-value=0.059 Score=48.46 Aligned_cols=182 Identities=10% Similarity=-0.048 Sum_probs=97.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCc----eeeCCCCCCCCcceeE-EEeCCE-EEEEecCCCCCCCCCcceEEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRT----WTFGPELVTPRRWCAA-GCSRGA-VYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~----W~~l~~~p~~r~~~~~-~~~~~~-iyv~GG~~~~~~~~~~~~v~~y 219 (387)
++.+++.|+.+ ..+.+||..+.. -..+. .......+. ..-+++ .++.|+.+. .+.+|
T Consensus 22 ~~~~l~~~~~d-------~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg--------~i~~w 84 (342)
T 1yfq_A 22 SKSLLLITSWD-------GSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQG--------EILKV 84 (342)
T ss_dssp GGTEEEEEETT-------SEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEETTS--------CEEEE
T ss_pred CCCEEEEEcCC-------CeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEcCCC--------eEEEE
Confidence 34555665532 357888887765 33222 111112222 233567 667776543 78899
Q ss_pred EC-CCCccccCeEEcCC--CCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc-------eeecccccccCCCCc
Q 016552 220 DL-MNGEKNSRWEKTGE--LKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT-------WDDMREGMVRGWRGP 289 (387)
Q Consensus 220 d~-~~~~~~~~W~~~~~--~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~-------W~~~~~~~~~~~~~~ 289 (387)
|. .+.. -..+.. ..... .......+.+++.++.+..+.+||+.+.. .+.+.. ........
T Consensus 85 d~~~~~~----~~~~~~~~~~~~v-----~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~v~ 154 (342)
T 1yfq_A 85 DLIGSPS----FQALTNNEANLGI-----CRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN-TKVKNKIF 154 (342)
T ss_dssp CSSSSSS----EEECBSCCCCSCE-----EEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS-SSSCCCEE
T ss_pred EeccCCc----eEeccccCCCCce-----EEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeE-EeeCCceE
Confidence 99 8887 655553 22111 22223325555666666789999876510 111211 11111123
Q ss_pred EEEEeCCeEEEEeCCCCeEEEEeCCC-Cc--eeEccccccccCc-eEEEE-e-CCeEEEEecCCCeEEEEeccC
Q 016552 290 VAAMDEEVLYGIDENSCTLSRYDEVM-DD--WKEVVKSDLLKGA-RHAAA-G-GGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 290 ~~~~~~~~ly~~~~~~~~l~~yd~~~-~~--W~~v~~~~~~~~~-~~~~~-~-~g~i~v~gg~~~~i~~~d~~~ 357 (387)
+++...+. ++.+..++.+..||.++ .. ...... ..... .++.. . +++.+++|+..+.+.++|...
T Consensus 155 ~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 155 TMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEES--GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp EEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEEC--SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred EEEecCCc-EEEEeCCCeEEEEECCccccccceeeec--CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence 44455555 55555678999999987 43 222111 11122 22222 2 578888888888888888764
No 159
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.90 E-value=0.012 Score=53.38 Aligned_cols=143 Identities=8% Similarity=0.046 Sum_probs=81.7
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEE--ECCEEEEEeeeC----CeEEEE
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKG----AEGAVY 268 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~----~~i~~y 268 (387)
+++||+.+..+ ..+.+||+.+++ ...+...+... ..++. -+|++|+..... ..+.+|
T Consensus 55 ~g~l~~~~~~~--------~~i~~~d~~~~~----~~~~~~~~~~~-----~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 55 QGQLFLLDVFE--------GNIFKINPETKE----IKRPFVSHKAN-----PAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp TSCEEEEETTT--------CEEEEECTTTCC----EEEEEECSSSS-----EEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred CCCEEEEECCC--------CEEEEEeCCCCc----EEEEeeCCCCC-----cceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 56888876542 278899999888 76543111111 22333 367888876433 479999
Q ss_pred ECCCCceeecccccccCCCCcEEEE-eCCeEEEEeCC------CCeEEEEeCCCCceeEccccccccCceEEE-EeCCe-
Q 016552 269 DVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDEN------SCTLSRYDEVMDDWKEVVKSDLLKGARHAA-AGGGR- 339 (387)
Q Consensus 269 D~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~------~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~g~- 339 (387)
|++++.-..+-...........+++ .+|++|+.+.. .+.|+.||+++.+...+.. .......++ .-+|+
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NISVANGIALSTDEKV 195 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EESSEEEEEECTTSSE
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCCcccceEECCCCCE
Confidence 9988765522110111111122333 36788887642 3579999998876665432 111122222 23454
Q ss_pred EEEEecCCCeEEEEecc
Q 016552 340 VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 340 i~v~gg~~~~i~~~d~~ 356 (387)
||+.......|.+||+.
T Consensus 196 l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 196 LWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCeEEEEEec
Confidence 77765556778888885
No 160
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.022 Score=52.99 Aligned_cols=192 Identities=8% Similarity=0.021 Sum_probs=97.5
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccC-----CceeeCCCCCCCCcceeEEEe--CCEEEEEecCCCCCCCCCcceEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPIC-----RTWTFGPELVTPRRWCAAGCS--RGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t-----~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~ 218 (387)
++.+++.|+.+ ..+.+||..+ ..-..+.....+ ....+.. ++++++.|+.+. .+.+
T Consensus 78 ~~~~l~~~~~d-------g~v~vw~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~l~s~~~dg--------~v~i 140 (416)
T 2pm9_A 78 NNKIIAGALDN-------GSLELYSTNEANNAINSMARFSNHSSS--VKTVKFNAKQDNVLASGGNNG--------EIFI 140 (416)
T ss_dssp SSSCEEEEESS-------SCEEEECCSSTTSCCCEEEECCCSSSC--CCEEEECSSSTTBEEEECSSS--------CEEB
T ss_pred CCCeEEEEccC-------CeEEEeecccccccccchhhccCCccc--eEEEEEcCCCCCEEEEEcCCC--------eEEE
Confidence 45566666532 2578888877 122333222111 1112222 266777776544 6788
Q ss_pred EECCCCcccc---CeEEcCCCCCCCccccceEEEEE--C-CEEEEEeeeCCeEEEEECCCCceeecccccc--c--CCCC
Q 016552 219 WDLMNGEKNS---RWEKTGELKDGRFSREAIDAVGW--K-GKLCLVNVKGAEGAVYDVVANTWDDMREGMV--R--GWRG 288 (387)
Q Consensus 219 yd~~~~~~~~---~W~~~~~~p~~~~~~~~~~~~~~--~-g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~--~--~~~~ 288 (387)
||..+..... .-..+....... ....++.+ + +.+++.++.+..+.+||..+.+-...-.... . ....
T Consensus 141 wd~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v 217 (416)
T 2pm9_A 141 WDMNKCTESPSNYTPLTPGQSMSSV---DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL 217 (416)
T ss_dssp CBTTTTSSCTTTCCCBCCCCSCCSS---CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCE
T ss_pred EECCCCccccccccccccccccCCC---CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCce
Confidence 8887664000 011111011000 01122222 3 5666776666789999998875432211110 0 1112
Q ss_pred cEEEEe--CCeEEEEeCCCC---eEEEEeCCCCceeEccccc-cccCceEEEEe---CCeEEEEecCCCeEEEEeccCC
Q 016552 289 PVAAMD--EEVLYGIDENSC---TLSRYDEVMDDWKEVVKSD-LLKGARHAAAG---GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 289 ~~~~~~--~~~ly~~~~~~~---~l~~yd~~~~~W~~v~~~~-~~~~~~~~~~~---~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.+++.. ++.+++.+..++ .|.+||..+..- .+.... ........+.. ++++++.++....+.+||+.+.
T Consensus 218 ~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp EEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred EEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 233333 235677766666 899999987531 111222 22222223332 6788888888888999998854
No 161
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.89 E-value=0.054 Score=48.93 Aligned_cols=197 Identities=10% Similarity=-0.019 Sum_probs=107.9
Q ss_pred eEEEEE--CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCC----CCcceeEEEe-CCEEEEEecCCCCCC---
Q 016552 140 VQLVSL--SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVT----PRRWCAAGCS-RGAVYVASGIGSQFS--- 209 (387)
Q Consensus 140 ~~~~~~--~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~----~r~~~~~~~~-~~~iyv~GG~~~~~~--- 209 (387)
..++.. ++.||+.... ..+.++|+.++..+.+..... .+..-.++.- +++|||.-.... +.
T Consensus 83 ~gi~~~~~~g~l~v~d~~--------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~-~~~~~ 153 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY--------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTL-YDDRG 153 (322)
T ss_dssp EEEEEETTTTEEEEEETT--------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSS-CCTTC
T ss_pred ceEEEcCCCCcEEEEECC--------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccc-ccccc
Confidence 445554 5788887431 237889988776655432211 1111122223 578999743210 00
Q ss_pred -------CCCcceEEEEECCCCccccCeEEcC-CCCCCCccccceEEEEECC-EEEEEeeeCCeEEEEECCCC---ceee
Q 016552 210 -------SDVAKSVEKWDLMNGEKNSRWEKTG-ELKDGRFSREAIDAVGWKG-KLCLVNVKGAEGAVYDVVAN---TWDD 277 (387)
Q Consensus 210 -------~~~~~~v~~yd~~~~~~~~~W~~~~-~~p~~~~~~~~~~~~~~~g-~lyv~gg~~~~i~~yD~~~~---~W~~ 277 (387)
......+.+||+.+.+ ...+. .+..+ ...+..-+| .||+.......+.+||+... +.+.
T Consensus 154 ~~~~~~~~~~~g~v~~~d~~~~~----~~~~~~~~~~p-----~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~ 224 (322)
T 2fp8_A 154 VQQIMDTSDKTGRLIKYDPSTKE----TTLLLKELHVP-----GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV 224 (322)
T ss_dssp HHHHHHHTCCCEEEEEEETTTTE----EEEEEEEESCC-----CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEE
T ss_pred cceehcccCCCceEEEEeCCCCE----EEEeccCCccC-----cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccce
Confidence 0112468899998877 55432 11111 111222245 48887655578999998753 3333
Q ss_pred cccccccCCCCcEEEE-eCCeEEEEeCC----------CCeEEEEeCCCCceeEcccccc--ccCceEEEEeCCeEEEEe
Q 016552 278 MREGMVRGWRGPVAAM-DEEVLYGIDEN----------SCTLSRYDEVMDDWKEVVKSDL--LKGARHAAAGGGRVCAVC 344 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~-~~~~ly~~~~~----------~~~l~~yd~~~~~W~~v~~~~~--~~~~~~~~~~~g~i~v~g 344 (387)
... .+ + ...+++ .+|.||+.... .+.|.+||++...-..+..... ......++..+|+|||.+
T Consensus 225 ~~~-~~-g--P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~ 300 (322)
T 2fp8_A 225 LVK-IP-N--PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGT 300 (322)
T ss_dssp EEE-CS-S--EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEEC
T ss_pred EEe-CC-C--CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEee
Confidence 221 11 1 122333 35678887643 3569999997664444443221 233344455689999997
Q ss_pred cCCCeEEEEeccCC
Q 016552 345 ENGGGIVVVDVKAA 358 (387)
Q Consensus 345 g~~~~i~~~d~~~~ 358 (387)
..+..|.+|++..+
T Consensus 301 ~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 301 LFHGSVGILVYDKK 314 (322)
T ss_dssp SSCSEEEEEEC---
T ss_pred cCCCceEEEecccc
Confidence 78899999998744
No 162
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.88 E-value=0.12 Score=45.96 Aligned_cols=148 Identities=7% Similarity=0.048 Sum_probs=81.5
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE----CCEEEEEeeeCCeEEEEEC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW----KGKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~----~g~lyv~gg~~~~i~~yD~ 270 (387)
+++.++.|+.+. .+.+||..++. ...+..+.... ....++.+ ++.+.+.++.+..+.++|.
T Consensus 20 ~g~~las~s~D~--------~v~iw~~~~~~----~~~~~~l~gH~---~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 20 YGKRMATCSSDK--------TIKIFEVEGET----HKLIDTLTGHE---GPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp TSSEEEEEETTS--------CEEEEEBCSSC----BCCCEEECCCS---SCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred CCCEEEEEeCCC--------EEEEEecCCCC----cEEEEEEcccc---CCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 567777777654 67888887654 32222121110 11223333 2667677777789999999
Q ss_pred CCCceeecccccccCCCCcEEEEe-C--CeEEEEeCCCCeEEEEeCCCCc-eeEccccccccCceEEEEe----------
Q 016552 271 VANTWDDMREGMVRGWRGPVAAMD-E--EVLYGIDENSCTLSRYDEVMDD-WKEVVKSDLLKGARHAAAG---------- 336 (387)
Q Consensus 271 ~~~~W~~~~~~~~~~~~~~~~~~~-~--~~ly~~~~~~~~l~~yd~~~~~-W~~v~~~~~~~~~~~~~~~---------- 336 (387)
.++.|..+...........+++.. + +.+++.++.++.+..||..+.. +.. ............+..
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP-IIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC-EEEECCSSCEEEEEECCCC------
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee-eeeecccCccceEeecCCccccccc
Confidence 988886554211111112233332 1 5667777778899999987652 321 111111111111111
Q ss_pred -----CCeEEEEecCCCeEEEEeccCC
Q 016552 337 -----GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 337 -----~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+++.++.|+....|.+||+.+.
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~ 190 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSD 190 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETT
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCC
Confidence 2467788777888999998753
No 163
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=96.86 E-value=0.00043 Score=63.48 Aligned_cols=42 Identities=24% Similarity=0.285 Sum_probs=36.6
Q ss_pred CCCCCCCChHHHHHHHhhhcC---chhhhhhhHhhhhhhcCCCCC
Q 016552 39 HQPLLPGLPDHIAHLCLSHVH---PSILHNVCHSWRRLIYSPSFP 80 (387)
Q Consensus 39 ~~~~~~~LPddl~~~iL~rLP---l~~~r~VcK~W~~li~~~~f~ 80 (387)
+...|..||+|++.+||.+|+ +.+++.|||+|+.+..++...
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 456789999999999999999 889999999999999887753
No 164
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.84 E-value=0.0058 Score=56.33 Aligned_cols=147 Identities=12% Similarity=0.169 Sum_probs=80.9
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++++++.|+.+. .+.+||..++. |..+..+..... ...++.+ ++++.+.++.+..+.+||..+
T Consensus 22 ~g~~l~~~~~d~--------~i~iw~~~~~~----~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTATN--------QVELYEQDGNG----WKHARTFSDHDK---IVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSSS--------CBCEEEEETTE----EEECCCBCCCSS---CEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred CCCEEEEecCCC--------EEEEEEccCCc----eEEEEEEecCCc---eEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 556666665543 67889999887 877765543221 1223332 566666777667899999998
Q ss_pred Cc-eeecccccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCc-eeEcccccc-ccCceEEEE--eCCeEEEEecC
Q 016552 273 NT-WDDMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMDD-WKEVVKSDL-LKGARHAAA--GGGRVCAVCEN 346 (387)
Q Consensus 273 ~~-W~~~~~~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~-W~~v~~~~~-~~~~~~~~~--~~g~i~v~gg~ 346 (387)
+. |..............+++.. ++++++.++.++.+.+||.++.. |..+..+.. .......+. -++++++.|+.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 87 55433211111112223322 45666666677899999998764 544443332 333333333 36778888888
Q ss_pred CCeEEEEecc
Q 016552 347 GGGIVVVDVK 356 (387)
Q Consensus 347 ~~~i~~~d~~ 356 (387)
...+.+||+.
T Consensus 167 d~~i~iwd~~ 176 (377)
T 3dwl_C 167 DRKAYVLSAY 176 (377)
T ss_dssp SSCEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 8889999985
No 165
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.83 E-value=0.11 Score=48.96 Aligned_cols=105 Identities=10% Similarity=-0.010 Sum_probs=60.0
Q ss_pred CCEEEEEeeeCCeEEEEECCCCc-eeecccccccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceeEcccccccc
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANT-WDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLK 328 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~ 328 (387)
++.+++.++....+.+||..+.. ...+...........+++.. +..+++.++.++.|.+||..+.. ..+.......
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~ 321 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESHK 321 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECCS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCC
Confidence 45677777766799999998763 11111100111111233332 33478888888999999997632 1122222222
Q ss_pred CceEEEEe--CC-eEEEEecCCCeEEEEeccC
Q 016552 329 GARHAAAG--GG-RVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 329 ~~~~~~~~--~g-~i~v~gg~~~~i~~~d~~~ 357 (387)
.....+.. ++ .+++.++..+.|.+||+..
T Consensus 322 ~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 322 DEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 23323332 34 5788888888899999986
No 166
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.83 E-value=0.1 Score=47.21 Aligned_cols=145 Identities=10% Similarity=-0.030 Sum_probs=81.7
Q ss_pred CEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEE-cCCCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEECC
Q 016552 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEK-TGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~-~~~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~ 271 (387)
+.+++.|+.+. .+.+||..+.+ -.. +..... ...++.+ ++.+++.++.+..+.+||..
T Consensus 85 ~~~l~~~~~dg--------~i~v~d~~~~~----~~~~~~~~~~------~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 85 HPLLAVAGSRG--------IIRIINPITMQ----CIKHYVGHGN------AINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp CEEEEEEETTC--------EEEEECTTTCC----EEEEEESCCS------CEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCEEEEecCCC--------EEEEEEchhce----EeeeecCCCC------cEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 56777777644 78899988776 222 211111 1223333 56777777777789999998
Q ss_pred CCceeecccc-cccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEcccc-----c-------------------
Q 016552 272 ANTWDDMREG-MVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKS-----D------------------- 325 (387)
Q Consensus 272 ~~~W~~~~~~-~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~-----~------------------- 325 (387)
+++-...-.. ........+++. .++..++.++.++.+.+||..+.+-...... +
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 8754332110 011111223333 2455666666788999999986532211000 0
Q ss_pred --cccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 326 --LLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 326 --~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.......++...+.+++.++....+.+||+.+.
T Consensus 227 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 227 RDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp CSSCSSCCCEEEEETTEEEEECSSSEEEEEEESST
T ss_pred ccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCc
Confidence 012223333333777788788889999998754
No 167
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.82 E-value=0.24 Score=44.83 Aligned_cols=183 Identities=13% Similarity=0.022 Sum_probs=98.6
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCcc
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEK 226 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~ 226 (387)
+.+|+++... ..+++||+.+++.+... ++. .....+..-++++|+... ..+.+||+.+++
T Consensus 61 ~~l~~~d~~~-------~~i~~~d~~~~~~~~~~-~~~-~v~~i~~~~dg~l~v~~~----------~gl~~~d~~~g~- 120 (326)
T 2ghs_A 61 GTAWWFNILE-------RELHELHLASGRKTVHA-LPF-MGSALAKISDSKQLIASD----------DGLFLRDTATGV- 120 (326)
T ss_dssp TEEEEEEGGG-------TEEEEEETTTTEEEEEE-CSS-CEEEEEEEETTEEEEEET----------TEEEEEETTTCC-
T ss_pred CEEEEEECCC-------CEEEEEECCCCcEEEEE-CCC-cceEEEEeCCCeEEEEEC----------CCEEEEECCCCc-
Confidence 6788876532 36899999988765432 221 112222334788887641 147889999888
Q ss_pred ccCeEEcCCCCCCC-ccccceEEEEECCEEEEEeee------CCeEEEEECCCCceeecccccccCCCCcEEEEe-CC-e
Q 016552 227 NSRWEKTGELKDGR-FSREAIDAVGWKGKLCLVNVK------GAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE-V 297 (387)
Q Consensus 227 ~~~W~~~~~~p~~~-~~~~~~~~~~~~g~lyv~gg~------~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~-~ 297 (387)
...+...+... ..+.....+--+|++|+.... ...++.|| +++...+..... ....+++. ++ .
T Consensus 121 ---~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~---~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 121 ---LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS---IPNSICFSPDGTT 192 (326)
T ss_dssp ---EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES---SEEEEEECTTSCE
T ss_pred ---EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc---ccCCeEEcCCCCE
Confidence 77665432211 111111122236788875432 14688888 455554422111 11233333 34 6
Q ss_pred EEEEeCCCCeEEEEeCC--CC-cee---EccccccccC-ceEE-EEeCCeEEEEecCCCeEEEEeccC
Q 016552 298 LYGIDENSCTLSRYDEV--MD-DWK---EVVKSDLLKG-ARHA-AAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 298 ly~~~~~~~~l~~yd~~--~~-~W~---~v~~~~~~~~-~~~~-~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
||+.+...+.|++||.+ ++ ... .+...+.... ...+ ..-+|.|++...++..|.+||+..
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG 260 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTC
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCC
Confidence 88887667789999975 44 221 1111111111 1222 223578888765667899998853
No 168
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.79 E-value=0.29 Score=45.31 Aligned_cols=152 Identities=10% Similarity=-0.009 Sum_probs=83.4
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCC--ccccceEEEEE--CC-EEEEEeeeCCeEEEEE
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR--FSREAIDAVGW--KG-KLCLVNVKGAEGAVYD 269 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~--~~~~~~~~~~~--~g-~lyv~gg~~~~i~~yD 269 (387)
++++++.|+.+. .+.+||..++. ......-+... .......++.+ ++ .+++.++.+..+.+||
T Consensus 93 ~~~~l~s~s~dg--------~v~vw~~~~~~----~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 93 NDNVIASGSEDC--------TVMVWEIPDGG----LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp CTTEEEEEETTS--------EEEEEECCTTC----CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCCC--------eEEEEEccCCC----CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 567777777644 78899988875 31100000000 00011222222 33 4666777667899999
Q ss_pred CCCCceeecccccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceeEcccccc--ccCceEEEEeCCeEEEEe--
Q 016552 270 VVANTWDDMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDL--LKGARHAAAGGGRVCAVC-- 344 (387)
Q Consensus 270 ~~~~~W~~~~~~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~--~~~~~~~~~~~g~i~v~g-- 344 (387)
..+++....-..........+++.. ++.+++.++.++.|.+||+++..-........ ......+...+++++++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 240 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS 240 (402)
T ss_dssp TTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC
T ss_pred CCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc
Confidence 9987653221000001111233332 56666677678899999998875433221111 112233344578888887
Q ss_pred -cCCCeEEEEeccCC
Q 016552 345 -ENGGGIVVVDVKAA 358 (387)
Q Consensus 345 -g~~~~i~~~d~~~~ 358 (387)
.....+.+||+.+.
T Consensus 241 ~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 241 RMSERQVALWDTKHL 255 (402)
T ss_dssp TTCCEEEEEEETTBC
T ss_pred CCCCceEEEEcCccc
Confidence 56788999999864
No 169
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.78 E-value=0.16 Score=45.55 Aligned_cols=142 Identities=13% Similarity=0.136 Sum_probs=80.5
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~ 272 (387)
+++..+.|+.+. .+.+||..+++. ...+...... ..++. -++.+.+.++.+..+.++|...
T Consensus 76 dg~~l~s~s~D~--------~v~~wd~~~~~~---~~~~~~h~~~------v~~~~~~~~~~~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 76 DGAYALSASWDK--------TLRLWDVATGET---YQRFVGHKSD------VMSVDIDKKASMIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp TSSEEEEEETTS--------EEEEEETTTTEE---EEEEECCSSC------EEEEEECTTSCEEEEEETTSCEEEEETTS
T ss_pred CCCEEEEEeCCC--------EEEEEECCCCCe---eEEEccCCCc------EEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 567777777654 789999988871 2222211111 22222 2566667777777899999876
Q ss_pred CceeecccccccCCCCcEEEEe-------CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEE--EEeCCeEEEE
Q 016552 273 NTWDDMREGMVRGWRGPVAAMD-------EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHA--AAGGGRVCAV 343 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~~-------~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~--~~~~g~i~v~ 343 (387)
..-..+... .. ....+... ++.+++.++.++.+..||.++..-. ............ ...+|+.++.
T Consensus 139 ~~~~~~~~h-~~--~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~--~~~~~h~~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 139 QCLATLLGH-ND--WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE--ADFIGHNSNINTLTASPDGTLIAS 213 (319)
T ss_dssp CEEEEECCC-SS--CEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE--EEECCCCSCEEEEEECTTSSEEEE
T ss_pred CeEEEEecc-CC--cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh--eeecCCCCcEEEEEEcCCCCEEEE
Confidence 543332210 00 01112221 3345666667889999999775322 222222222222 2346788888
Q ss_pred ecCCCeEEEEeccCC
Q 016552 344 CENGGGIVVVDVKAA 358 (387)
Q Consensus 344 gg~~~~i~~~d~~~~ 358 (387)
|+....|.+||+.+.
T Consensus 214 ~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 214 AGKDGEIMLWNLAAK 228 (319)
T ss_dssp EETTCEEEEEETTTT
T ss_pred EeCCCeEEEEECCCC
Confidence 888888999998854
No 170
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.78 E-value=0.1 Score=46.78 Aligned_cols=144 Identities=9% Similarity=0.019 Sum_probs=83.5
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEE-EECCEEEEEeeeC--CeEEEEECC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAV-GWKGKLCLVNVKG--AEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~-~~~g~lyv~gg~~--~~i~~yD~~ 271 (387)
+++||+..-. ...+.+||+.... ......+. .. +..+ .-+|++|+..... ..+..||+.
T Consensus 42 ~g~lyv~d~~--------~~~I~~~d~~g~~-----~~~~~~~~--~p---~gia~~~dG~l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 42 DGTIFVTNHE--------VGEIVSITPDGNQ-----QIHATVEG--KV---SGLAFTSNGDLVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp TSCEEEEETT--------TTEEEEECTTCCE-----EEEEECSS--EE---EEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCCEEEEeCC--------CCeEEEECCCCce-----EEEEeCCC--Cc---eeEEEcCCCcEEEEeccCCcceEEEEcCC
Confidence 6789988432 2367889887643 22222221 10 2222 2368899887543 358889998
Q ss_pred CCceeecccccccCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCC---ceeEccc------cccccCceEEEEeCCeEE
Q 016552 272 ANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSCTLSRYDEVMD---DWKEVVK------SDLLKGARHAAAGGGRVC 341 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~~~~~~-~~~~~ly~~~~~~~~l~~yd~~~~---~W~~v~~------~~~~~~~~~~~~~~g~i~ 341 (387)
+++.+.+.. .+........+ ..++.+|+.+...+.|+++|+.+. .|..-.. .........+..-++.||
T Consensus 104 ~g~~~~~~~-~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ly 182 (306)
T 2p4o_A 104 DGTVETLLT-LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLY 182 (306)
T ss_dssp TSCEEEEEE-CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEE
T ss_pred CCeEEEEEe-CCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEE
Confidence 888766543 22222222222 346678888766789999999764 2211111 011223344433445788
Q ss_pred EEecCCCeEEEEeccC
Q 016552 342 AVCENGGGIVVVDVKA 357 (387)
Q Consensus 342 v~gg~~~~i~~~d~~~ 357 (387)
+.-..+..|.+||++.
T Consensus 183 v~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEETTTTEEEEEEBCT
T ss_pred EEeCCCCEEEEEEeCC
Confidence 8877788999999874
No 171
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.78 E-value=0.056 Score=50.33 Aligned_cols=143 Identities=9% Similarity=0.083 Sum_probs=82.6
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
+++.++.|+.+. .+.+||..+.+ -...-.-... ...++.+ ++...+.++.+..+.++|..+
T Consensus 134 dg~~l~s~~~d~--------~i~iwd~~~~~----~~~~~~~h~~-----~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAEDR--------LIRIWDIENRK----IVMILQGHEQ-----DIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETTS--------CEEEEETTTTE----EEEEECCCSS-----CEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEcCCC--------eEEEEECCCCc----EEEEEccCCC-----CEEEEEEcCCCCEEEEecCCCcEEEEECCC
Confidence 567777777644 78899998876 4322111111 1222222 566666666667899999988
Q ss_pred CceeecccccccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceeEccccc-----cccCceEEE--EeCCeEEEE
Q 016552 273 NTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSRYDEVMDDWKEVVKSD-----LLKGARHAA--AGGGRVCAV 343 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~-----~~~~~~~~~--~~~g~i~v~ 343 (387)
++....-. ... ...++++. ++++++.++.++.+..||.++..-......+ ........+ .-+++.++.
T Consensus 197 ~~~~~~~~-~~~--~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 197 GQCSLTLS-IED--GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp TEEEEEEE-CSS--CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEE
T ss_pred CeeEEEEE-cCC--CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEE
Confidence 76432211 111 11223332 5677778777889999999887543321111 112222222 236778888
Q ss_pred ecCCCeEEEEeccC
Q 016552 344 CENGGGIVVVDVKA 357 (387)
Q Consensus 344 gg~~~~i~~~d~~~ 357 (387)
|+....+.+||+.+
T Consensus 274 ~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 274 GSLDRSVKLWNLQN 287 (393)
T ss_dssp EETTSEEEEEEC--
T ss_pred EeCCCEEEEEECCC
Confidence 88888899999874
No 172
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.78 E-value=0.17 Score=45.76 Aligned_cols=170 Identities=11% Similarity=-0.000 Sum_probs=94.5
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEEe--CCEEEEEecCCCCCCCCCcceEEEEECCC----CccccCeEEcC--CC
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGCS--RGAVYVASGIGSQFSSDVAKSVEKWDLMN----GEKNSRWEKTG--EL 236 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~----~~~~~~W~~~~--~~ 236 (387)
++.++|+.+.....+.+ .-..-.+.+.. +++||+.... ...+.++|+.. .. -..+. .+
T Consensus 11 ~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~--------~~~I~~~~~~g~~~~~~----~~~~~~~~~ 76 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSS----YDTVISRDI 76 (316)
T ss_dssp SEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT--------TTEEEEEEC------------CEEEECSSC
T ss_pred eEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC--------CCcEEEEECCCCCCCcc----cEEEEeCCC
Confidence 46777877776655322 11111222322 5789998533 23788888876 22 22221 11
Q ss_pred CCCCccccceEEEE-ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCC-cEEEE--eCCeEEEEeCCC-CeEEEE
Q 016552 237 KDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRG-PVAAM--DEEVLYGIDENS-CTLSRY 311 (387)
Q Consensus 237 p~~~~~~~~~~~~~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~--~~~~ly~~~~~~-~~l~~y 311 (387)
..+ ...++- .++.||+.......|.++|+....-..+.. ..... ..+++ .++.||+.+... +.|+++
T Consensus 77 ~~p-----~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~---~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~ 148 (316)
T 1ijq_A 77 QAP-----DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 148 (316)
T ss_dssp SCC-----CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCc-----CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE---CCCCCcceEEeCCCCCEEEEEccCCCCeEEEE
Confidence 111 122222 478999987666789999988654332221 11112 23444 378999988543 789999
Q ss_pred eCCCCceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccC
Q 016552 312 DEVMDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
+++...=+.+... ....+..++. -+++||+.-.....|.++|.+.
T Consensus 149 ~~dG~~~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 149 GLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp ETTSCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cCCCCCeEEEEEC-CCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 9977543333221 2223333443 3678998876778888888874
No 173
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.77 E-value=0.035 Score=50.03 Aligned_cols=191 Identities=9% Similarity=0.108 Sum_probs=101.0
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcc-eeEEE-eC--CEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRW-CAAGC-SR--GAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~-~~~~~-~~--~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
+.+++.|+.+ ..+.+||..+..|..+..+...... .+.+. -+ +.+++.|+.+. .+.+||..
T Consensus 71 ~~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYD-------RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG--------AISLLTYT 135 (316)
T ss_dssp SSCEEEEETT-------SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS--------CEEEEEEC
T ss_pred CCEEEEEECC-------CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC--------CEEEEecC
Confidence 5566666643 3578899988877654333222211 11222 12 55667766544 67778877
Q ss_pred CC-ccccCeEEcCCCCCCCccccceEEEEE-------------------CCEEEEEeeeCCeEEEEECCC-Cceeecccc
Q 016552 223 NG-EKNSRWEKTGELKDGRFSREAIDAVGW-------------------KGKLCLVNVKGAEGAVYDVVA-NTWDDMREG 281 (387)
Q Consensus 223 ~~-~~~~~W~~~~~~p~~~~~~~~~~~~~~-------------------~g~lyv~gg~~~~i~~yD~~~-~~W~~~~~~ 281 (387)
+. . |.....+...... ..++.. ++++++.++.+..+.++|..+ +.|..+..
T Consensus 136 ~~~~----~~~~~~~~~h~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~- 207 (316)
T 3bg1_A 136 GEGQ----WEVKKINNAHTIG---CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK- 207 (316)
T ss_dssp SSSC----EEECCBTTSSSSC---BCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC-
T ss_pred CCCC----cceeeeeccccCC---cceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee-
Confidence 65 4 6543322111100 001110 134556666667788888864 45755432
Q ss_pred cccCCCC--cEEEEe-C----CeEEEEeCCCCeEEEEeCCC---CceeEccccccccCceEE--EEeCCeEEEEecCCCe
Q 016552 282 MVRGWRG--PVAAMD-E----EVLYGIDENSCTLSRYDEVM---DDWKEVVKSDLLKGARHA--AAGGGRVCAVCENGGG 349 (387)
Q Consensus 282 ~~~~~~~--~~~~~~-~----~~ly~~~~~~~~l~~yd~~~---~~W~~v~~~~~~~~~~~~--~~~~g~i~v~gg~~~~ 349 (387)
+ .+... .+++.. + +.+++.++.++.|..||.++ ..|.... +......... ...++++++.++....
T Consensus 208 l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~-~~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 208 L-EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKL-LHKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp C-BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCE-EEECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred c-ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhh-hhcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 1 11111 223322 2 25666677788999999876 3443211 1111222222 2346788888888888
Q ss_pred EEEEeccCCCCCCceE
Q 016552 350 IVVVDVKAAAAPTIFV 365 (387)
Q Consensus 350 i~~~d~~~~~~~~~W~ 365 (387)
+.+||.... ..|.
T Consensus 286 v~lw~~~~~---g~~~ 298 (316)
T 3bg1_A 286 VTLWKESVD---GQWV 298 (316)
T ss_dssp EEEEEECTT---SCEE
T ss_pred EEEEEECCC---CcEE
Confidence 999998733 2677
No 174
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.77 E-value=0.04 Score=49.48 Aligned_cols=186 Identities=11% Similarity=0.012 Sum_probs=92.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++.+++.|+.+. .+.+++........................++..++.|+.+. .+.+||.....
T Consensus 97 dg~~l~s~~~d~-------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~--------~~~~~d~~~~~ 161 (340)
T 4aow_A 97 DGQFALSGSWDG-------TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK--------TIKLWNTLGVC 161 (340)
T ss_dssp TSSEEEEEETTS-------EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS--------CEEEECTTSCE
T ss_pred CCCEEEEEcccc-------cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCC--------eEEEEEeCCCc
Confidence 455666666432 466777776655443222222222222223455566665543 55677776554
Q ss_pred cccCeEEcCCCCCCCccccceEEEEE--C--CEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEE
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYG 300 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~--~--g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~ 300 (387)
-......... .....+.+ + +.+++.++.+..+.+||..+.+-...-.... ....++++ .++++++
T Consensus 162 ----~~~~~~~~~~----~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~ 231 (340)
T 4aow_A 162 ----KYTVQDESHS----EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCA 231 (340)
T ss_dssp ----EEEECSSSCS----SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEE
T ss_pred ----eEEEEecccc----CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCC--CcEEEEEECCCCCEEE
Confidence 2222111101 01112222 2 2355556666789999998876433211111 11123333 2567777
Q ss_pred EeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 301 IDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.++.++.+..||..+..- +........-..+....+..++.++.+..|.+||+.+.
T Consensus 232 s~s~Dg~i~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 232 SGGKDGQAMLWDLNEGKH--LYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEETTCEEEEEETTTTEE--EEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred EEeCCCeEEEEEeccCce--eeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCC
Confidence 777789999999977632 22222211122233334445555566777888888753
No 175
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.74 E-value=0.27 Score=43.64 Aligned_cols=194 Identities=12% Similarity=0.120 Sum_probs=101.6
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCC--ceeeCCCCCCCCc-ceeEEEe---CCEEEEEecCCCCCCCCCcceEEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTPRR-WCAAGCS---RGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~--~W~~l~~~p~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~y 219 (387)
++.+++.|+.+ ..+.+||..++ .++.+..+..... ..+.+.. ++++++.|+.+. .+.+|
T Consensus 22 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg--------~v~vw 86 (351)
T 3f3f_A 22 YGRHVATCSSD-------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK--------TVKLW 86 (351)
T ss_dssp SSSEEEEEETT-------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS--------CEEEE
T ss_pred CCCEEEEeeCC-------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC--------eEEEE
Confidence 45566666532 25777777643 3443333322222 2222222 367777777654 67888
Q ss_pred ECCCCccc---cCeEEcCCCCCCCccccceEEEEE--C--CEEEEEeeeCCeEEEEECCCCc----eeeccc-----ccc
Q 016552 220 DLMNGEKN---SRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVANT----WDDMRE-----GMV 283 (387)
Q Consensus 220 d~~~~~~~---~~W~~~~~~p~~~~~~~~~~~~~~--~--g~lyv~gg~~~~i~~yD~~~~~----W~~~~~-----~~~ 283 (387)
|..+.... -.|..+..+..... ...++.+ + +.+.+.++.+..+.+||..+.+ |..... ..+
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKG---SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSS---CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred ecCCCcccccccCcceeeeecccCC---ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 88765310 00333332221111 1223333 2 6666676766789999987664 221110 001
Q ss_pred cCCC--CcEEEEe----CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEE--eCC----eEEEEecCCCeEE
Q 016552 284 RGWR--GPVAAMD----EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA--GGG----RVCAVCENGGGIV 351 (387)
Q Consensus 284 ~~~~--~~~~~~~----~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~g----~i~v~gg~~~~i~ 351 (387)
.... ..+++.. ++.+++.++..+.+..++........+............+. -++ ++++.|+..+.|.
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 1111 1222222 25666777667778777777777665555544333322232 234 6888888888899
Q ss_pred EEeccC
Q 016552 352 VVDVKA 357 (387)
Q Consensus 352 ~~d~~~ 357 (387)
+||+.+
T Consensus 244 iwd~~~ 249 (351)
T 3f3f_A 244 IFKITE 249 (351)
T ss_dssp EEEEEE
T ss_pred EEeCCC
Confidence 999985
No 176
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.14 Score=46.54 Aligned_cols=104 Identities=8% Similarity=0.026 Sum_probs=63.0
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEcccccc-ccC
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDL-LKG 329 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~-~~~ 329 (387)
++.+++.++.+..+.+||+.+++-...... .......+++. .++.+++.++.++.|.+||..+..-.. ..+.. ...
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~-~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~-~~~~~~h~~ 215 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSA-KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS-SRFPVDEEA 215 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECC-CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC-EECCCCTTS
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEec-CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc-cEEeccCCC
Confidence 566667677777899999988765332211 11111233443 366777888888999999998875330 11111 223
Q ss_pred ceEEEE--eCCeEEEEecCCCeEEEEeccCC
Q 016552 330 ARHAAA--GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 330 ~~~~~~--~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
....+. -+++.++.++.+ .+.+||+.+.
T Consensus 216 ~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~ 245 (343)
T 3lrv_A 216 KIKEVKFADNGYWMVVECDQ-TVVCFDLRKD 245 (343)
T ss_dssp CEEEEEECTTSSEEEEEESS-BEEEEETTSS
T ss_pred CEEEEEEeCCCCEEEEEeCC-eEEEEEcCCC
Confidence 333333 357777776655 8999999865
No 177
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.73 E-value=0.56 Score=46.80 Aligned_cols=181 Identities=8% Similarity=-0.097 Sum_probs=110.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.||+.-. ....++++++.....+.+....... -...++ .+++||++-.. ...++++|+..
T Consensus 48 ~~~lywtD~-------~~~~I~r~~~~g~~~~~v~~~g~~~-P~GlAvD~~~~~LY~tD~~--------~~~I~v~~~dG 111 (628)
T 4a0p_A 48 DNRIYWTDI-------SLKTISRAFMNGSALEHVVEFGLDY-PEGMAVDWLGKNLYWADTG--------TNRIEVSKLDG 111 (628)
T ss_dssp TTEEEEEET-------TTTEEEEEETTSCSCEEEECSSCSC-CCEEEEETTTTEEEEEETT--------TTEEEEEETTS
T ss_pred CCEEEEEEC-------CCCeEEEEECCCCCcEEEEeCCCCC-cceEEEEeCCCEEEEEECC--------CCEEEEEecCC
Confidence 578898743 2246788888766555543222111 112333 46899997432 24789999865
Q ss_pred CccccCeEEc--CCCCCCCccccceEEEE--ECCEEEEEe-eeCCeEEEEECCCCceeecccccccCCCCc-EEEEe--C
Q 016552 224 GEKNSRWEKT--GELKDGRFSREAIDAVG--WKGKLCLVN-VKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD--E 295 (387)
Q Consensus 224 ~~~~~~W~~~--~~~p~~~~~~~~~~~~~--~~g~lyv~g-g~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~--~ 295 (387)
.. =..+ ..+..| ...++ .+|.||+.. +....|+..++....-+.+.. ....| ++++. +
T Consensus 112 ~~----~~~l~~~~l~~P------~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~----~~~~P~GlalD~~~ 177 (628)
T 4a0p_A 112 QH----RQVLVWKDLDSP------RALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP----NVGRANGLTIDYAK 177 (628)
T ss_dssp TT----CEEEECSSCCCE------EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC----SCSSEEEEEEETTT
T ss_pred Cc----EEEEEeCCCCCc------ccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC----CCCCcceEEEcccc
Confidence 54 2222 222222 12222 268999986 334689999987665444332 11122 34443 6
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 296 EVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 296 ~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++||+.+...+.|.++|.++..=+.+.. ....+++++..++.||+.-..+..|..+|..++
T Consensus 178 ~~LY~aD~~~~~I~~~d~dG~~~~v~~~--~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 178 RRLYWTDLDTNLIESSNMLGLNREVIAD--DLPHPFGLTQYQDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEE--CCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEECCCCEEEEEcCCCCceEEeec--cCCCceEEEEECCEEEEecCCCCEEEEEECCCC
Confidence 8999999888899999997643232222 244567788888999999777788999987644
No 178
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.72 E-value=0.14 Score=50.09 Aligned_cols=143 Identities=11% Similarity=-0.042 Sum_probs=83.0
Q ss_pred CEEEEEecC-CCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCC
Q 016552 196 GAVYVASGI-GSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 196 ~~iyv~GG~-~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++.++.|+. +. .+.+||..+.+ ... ..+..... ...++.+ +|++.+.++.+..+.+||..+
T Consensus 456 ~~~l~~~~~~d~--------~i~~~~~~~~~----~~~-~~~~~~~~---~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 519 (615)
T 1pgu_A 456 QNYVAVGLEEGN--------TIQVFKLSDLE----VSF-DLKTPLRA---KPSYISISPSETYIAAGDVMGKILLYDLQS 519 (615)
T ss_dssp SSEEEEEETTTS--------CEEEEETTEEE----EEE-ECSSCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCEEEEeecCCC--------eEEEEECCCcc----ccc-cccCCccC---ceEEEEECCCCCEEEEcCCCCeEEEeeCCC
Confidence 555566554 33 67889998877 542 21111111 1233333 778777777777899999987
Q ss_pred CceeecccccccCCCCcEEEE-e----------CCeEEEEeCCCCeEEEEeCCCCceeEccccccccC--ceEEEEeCCe
Q 016552 273 NTWDDMREGMVRGWRGPVAAM-D----------EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKG--ARHAAAGGGR 339 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~-~----------~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~--~~~~~~~~g~ 339 (387)
.+-...-... ......+++. . ++++++.++.++.|.+||.++.. ..+..+..... .......+++
T Consensus 520 ~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 520 REVKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-KIIKALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp TEEEECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT-CCEEETTSSTTCEEEEEEEETTE
T ss_pred CcceeEeecC-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc-eechhhhcCccceEEEEEcCCCC
Confidence 6543221100 1111223333 2 56777777778899999998762 11222222222 2334456788
Q ss_pred EEEEecCCCeEEEEeccC
Q 016552 340 VCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 340 i~v~gg~~~~i~~~d~~~ 357 (387)
++.++..+.+.+||++.
T Consensus 598 -l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 598 -LVSSGADACIKRWNVVL 614 (615)
T ss_dssp -EEEEETTSCEEEEEEC-
T ss_pred -eEEecCCceEEEEeeec
Confidence 77777788899999874
No 179
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.72 E-value=0.1 Score=47.65 Aligned_cols=181 Identities=12% Similarity=0.095 Sum_probs=89.3
Q ss_pred cEEEeccCCceeeCCCCCCCCcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEE--CCCCccccCeEEcCCCCCCCcc
Q 016552 166 PLIFDPICRTWTFGPELVTPRRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWD--LMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 166 ~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd--~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
++.+|+.+++.+.+...........+..-++ .||+.+..+. ....+.+|+ ..+++ ...+...+.....
T Consensus 31 ~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~-----~~~~v~~~~~~~~~g~----~~~~~~~~~~~~~ 101 (361)
T 3scy_A 31 TFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSK-----DQAAVSAFAFDKEKGT----LHLLNTQKTMGAD 101 (361)
T ss_dssp EEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSS-----TTCEEEEEEEETTTTE----EEEEEEEECSSSC
T ss_pred EEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCC-----CCCcEEEEEEeCCCCc----EEEeeEeccCCCC
Confidence 4556788888877654422222222223344 5777654321 113555554 44466 6665533321111
Q ss_pred ccceEEEEECCE-EEEEeeeCCeEEEEECCCC-ceeeccccc---ccC----C----CCcEEEEe-CC-eEEEEeCCCCe
Q 016552 243 REAIDAVGWKGK-LCLVNVKGAEGAVYDVVAN-TWDDMREGM---VRG----W----RGPVAAMD-EE-VLYGIDENSCT 307 (387)
Q Consensus 243 ~~~~~~~~~~g~-lyv~gg~~~~i~~yD~~~~-~W~~~~~~~---~~~----~----~~~~~~~~-~~-~ly~~~~~~~~ 307 (387)
.+..+. +|+ +|+.+..+..+.+||..++ ....+.... ..+ + ....+++. +| .||+.+...+.
T Consensus 102 --p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 102 --PCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp --EEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred --cEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 122233 666 6655544478999998754 222221100 000 0 01224432 44 58887766778
Q ss_pred EEEEeCCCCc-------eeEc-----cccccccCc-eEEEEeCCe-EEEEecCCCeEEEEeccCC
Q 016552 308 LSRYDEVMDD-------WKEV-----VKSDLLKGA-RHAAAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 308 l~~yd~~~~~-------W~~v-----~~~~~~~~~-~~~~~~~g~-i~v~gg~~~~i~~~d~~~~ 358 (387)
+.+|+.+.+. .... ...+..... ..+..-+|+ +|+.+..++.+.+||+.+.
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 8888776544 2211 111111122 323344565 6666556788999998744
No 180
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.66 E-value=0.48 Score=46.83 Aligned_cols=117 Identities=16% Similarity=0.119 Sum_probs=69.0
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccEEEeccCC--ceeeCCCCCCCC------cceeEEEeCCEEEEEecCCCCCCCCC
Q 016552 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTPR------RWCAAGCSRGAVYVASGIGSQFSSDV 212 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~--~W~~l~~~p~~r------~~~~~~~~~~~iyv~GG~~~~~~~~~ 212 (387)
..++.++.||+.... ..++.+|..|. .|+.-...+... .....++.+++||+...
T Consensus 63 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--------- 125 (582)
T 1flg_A 63 QAIVSDGVIYVTASY--------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--------- 125 (582)
T ss_dssp CCEEETTEEEEEETT--------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------
T ss_pred ccEEECCEEEEEcCC--------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------
Confidence 345678999997652 23889999876 588743322110 11234567889988532
Q ss_pred cceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECC------EEEEEee-----eCCeEEEEECCCC--ceee
Q 016552 213 AKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKG------KLCLVNV-----KGAEGAVYDVVAN--TWDD 277 (387)
Q Consensus 213 ~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g------~lyv~gg-----~~~~i~~yD~~~~--~W~~ 277 (387)
-..+.++|..+++.. |+.-..-+...+... ..-++.++ .+|+-.. ....+.+||++++ .|+.
T Consensus 126 dg~l~AlD~~TG~~~--W~~~~~~~~~~~~~~-~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 126 DASVVALNKNTGKVV--WKKKFADHGAGYTMT-GAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp TTEEEEEESSSCCEE--EEEECSCGGGTCBCC-SCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred CCEEEEEECCCCCEE--eeecCCCCCcCcccc-cCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 136789999998866 885432211111101 12234566 7776432 1357999999877 4864
No 181
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.63 E-value=0.27 Score=44.30 Aligned_cols=183 Identities=8% Similarity=-0.007 Sum_probs=96.0
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCc-ceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~-~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
+.+++.|+.+ ..+.+||..+........+..... ....+ .-+++.++.|+.+. .+.+||..+.
T Consensus 54 g~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--------~v~iwd~~~~ 118 (368)
T 3mmy_A 54 GNFLIAGSWA-------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK--------TAKMWDLSSN 118 (368)
T ss_dssp SEEEEEEETT-------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTT
T ss_pred ceEEEEECCC-------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC--------cEEEEEcCCC
Confidence 3677777643 257888888733322111111111 11122 22566666766544 7899999988
Q ss_pred ccccCeEEcCCCCCCCccccceEEEE----ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEE
Q 016552 225 EKNSRWEKTGELKDGRFSREAIDAVG----WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYG 300 (387)
Q Consensus 225 ~~~~~W~~~~~~p~~~~~~~~~~~~~----~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~ 300 (387)
+ -......... ..++. -++.+++.++.+..+.+||..+++-... ........+.......+ +
T Consensus 119 ~----~~~~~~~~~~------v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~---~~~~~~~~~~~~~~~~~-~ 184 (368)
T 3mmy_A 119 Q----AIQIAQHDAP------VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV---LQLPERCYCADVIYPMA-V 184 (368)
T ss_dssp E----EEEEEECSSC------EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE---EECSSCEEEEEEETTEE-E
T ss_pred C----ceeeccccCc------eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE---EecCCCceEEEecCCee-E
Confidence 8 5554322211 22232 3667777777777899999887642211 11111122333445444 4
Q ss_pred EeCCCCeEEEEeCCCCc--eeEccccccccCceEEEEeCC----eEEEEecCCCeEEEEeccCC
Q 016552 301 IDENSCTLSRYDEVMDD--WKEVVKSDLLKGARHAAAGGG----RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~--W~~v~~~~~~~~~~~~~~~~g----~i~v~gg~~~~i~~~d~~~~ 358 (387)
++...+.+..||.+... +..+...............+. ..+++|+.+..+.+||+...
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPP 248 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCS
T ss_pred EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCC
Confidence 44456789999987653 333322111111222222222 23677777888899988754
No 182
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.61 E-value=0.37 Score=43.64 Aligned_cols=141 Identities=9% Similarity=0.044 Sum_probs=76.1
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeE-EcCCCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWE-KTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~-~~~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~ 271 (387)
++.+.+.|+.+. .+.+||..+.+ -. .+...... ..++. -+++..+.++.+..+.++|..
T Consensus 87 ~~~~l~s~s~D~--------~v~lwd~~~~~----~~~~~~~h~~~------v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 87 ENCFAISSSWDK--------TLRLWDLRTGT----TYKRFVGHQSE------VYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp STTEEEEEETTS--------EEEEEETTSSC----EEEEEECCCSC------EEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred CCCEEEEEcCCC--------cEEEEECCCCc----EEEEEcCCCCc------EEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 456667776644 78899998876 33 22211111 22222 256666677777789999987
Q ss_pred CCceeecccccccCCCCcEEEEe-C----------CeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEE--EeCC
Q 016552 272 ANTWDDMREGMVRGWRGPVAAMD-E----------EVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAA--AGGG 338 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~~~~~~~~-~----------~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~g 338 (387)
...-..............+++.. + +.+++.++.++.|.+||.... ..............+ ..+|
T Consensus 149 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~h~~~v~~~~~s~~g 225 (343)
T 2xzm_R 149 GECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ---IRYTFKAHESNVNHLSISPNG 225 (343)
T ss_dssp SCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE---EEEEEECCSSCEEEEEECTTS
T ss_pred CCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCc---eeEEEcCccccceEEEECCCC
Confidence 44322221100000001122221 1 145666667889999995432 222222222222223 3467
Q ss_pred eEEEEecCCCeEEEEecc
Q 016552 339 RVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 339 ~i~v~gg~~~~i~~~d~~ 356 (387)
+.++.|+....|.+||+.
T Consensus 226 ~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 226 KYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp SEEEEEETTCEEEEEESS
T ss_pred CEEEEEcCCCeEEEEECC
Confidence 888888888899999984
No 183
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.58 E-value=0.00073 Score=60.04 Aligned_cols=37 Identities=24% Similarity=0.396 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhhhcC---chhhhhhhHhhhhhhcCCCC
Q 016552 43 LPGLPDHIAHLCLSHVH---PSILHNVCHSWRRLIYSPSF 79 (387)
Q Consensus 43 ~~~LPddl~~~iL~rLP---l~~~r~VcK~W~~li~~~~f 79 (387)
|..||+||+..||+.|+ ++++..|||+|+.+..++..
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~L 44 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPIL 44 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchH
Confidence 55799999999999998 99999999999999999854
No 184
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.33 Score=43.90 Aligned_cols=180 Identities=9% Similarity=0.043 Sum_probs=90.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCC-cceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPR-RWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++..++.|+.+ ..+.+||..+.+-.......... ....+..-++++++.|+.+. .+.+||..+.
T Consensus 138 ~~~~l~s~s~d-------g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg--------~i~iwd~~~~ 202 (343)
T 3lrv_A 138 NTEYFIWADNR-------GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG--------ILDVYNLSSP 202 (343)
T ss_dssp -CCEEEEEETT-------CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS--------CEEEEESSCT
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCC
Confidence 45566666643 25789999887654332222221 12222233677778777654 7899999887
Q ss_pred ccccCeE--EcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCcee-ecccccccCCC--CcEEEEe-CC
Q 016552 225 EKNSRWE--KTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWD-DMREGMVRGWR--GPVAAMD-EE 296 (387)
Q Consensus 225 ~~~~~W~--~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~-~~~~~~~~~~~--~~~~~~~-~~ 296 (387)
+ -. .+..-.. ....++.+ +|...+.++.+ .+.+||+.+.+-. .+......... ..+++.. ++
T Consensus 203 ~----~~~~~~~~~h~-----~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 203 D----QASSRFPVDEE-----AKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp T----SCCEECCCCTT-----SCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred C----CCccEEeccCC-----CCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 7 32 2221001 11223333 56666666644 8999999876421 11110000011 1124433 45
Q ss_pred eEEEEeCC-CCeEEEEeC--CCCceeE----cccccc---ccCceEEEEeCCeEEEEecCCCeE
Q 016552 297 VLYGIDEN-SCTLSRYDE--VMDDWKE----VVKSDL---LKGARHAAAGGGRVCAVCENGGGI 350 (387)
Q Consensus 297 ~ly~~~~~-~~~l~~yd~--~~~~W~~----v~~~~~---~~~~~~~~~~~g~i~v~gg~~~~i 350 (387)
+.++.++. ++.+.+|+. ....|.. .....+ ......++..++.+.++-..+...
T Consensus 273 ~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~ 336 (343)
T 3lrv_A 273 KNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDSF 336 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEEECSSEE
T ss_pred CEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEEEecCCeE
Confidence 55555433 667777766 5567987 112222 112344556677777665444333
No 185
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.55 E-value=0.21 Score=51.11 Aligned_cols=212 Identities=10% Similarity=0.055 Sum_probs=115.2
Q ss_pred EEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEEEE-CCEEEEEecccCCCCCCCCccEEEeccCCceeeC
Q 016552 101 HLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVSL-SGKLILLAATTHNFNPALTRPLIFDPICRTWTFG 179 (387)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l 179 (387)
.++.||+.++++..+...... . ..-.+++.. ++.|++. .. ..+++||+.+++|...
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~-~-------------~~v~~i~~d~~g~lwig-t~--------~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNE-L-------------LDVRVFYEDKNKKIWIG-TH--------AGVFVIDLASKKVIHH 484 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTC-C-------------CCEEEEEECTTSEEEEE-ET--------TEEEEEESSSSSCCEE
T ss_pred CEEEEcCCCCcEEEeccCCCC-C-------------CeEEEEEECCCCCEEEE-EC--------CceEEEeCCCCeEEec
Confidence 466788887777766432110 0 000223332 3566653 31 2489999999988765
Q ss_pred CCCC-----CCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--C
Q 016552 180 PELV-----TPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--K 252 (387)
Q Consensus 180 ~~~p-----~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~ 252 (387)
.... ...........+++|++... . .-+..||+.+++ +..... +.. .......++.. +
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~--------~Gl~~~~~~~~~----~~~~~~-~~~-l~~~~i~~i~~d~~ 549 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIGTF-G--------GGVGIYTPDMQL----VRKFNQ-YEG-FCSNTINQIYRSSK 549 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEEES-S--------SCEEEECTTCCE----EEEECT-TTT-CSCSCEEEEEECTT
T ss_pred ccCcccccccceeEEEEEcCCCCEEEEEc-C--------CCEEEEeCCCCe----EEEccC-CCC-CCCCeeEEEEECCC
Confidence 4322 11111112223567887532 1 135779998888 877653 111 11111223333 5
Q ss_pred CEEEEEeeeCCeE-EEEECCCCceeeccc--ccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceeEcccccccc
Q 016552 253 GKLCLVNVKGAEG-AVYDVVANTWDDMRE--GMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLK 328 (387)
Q Consensus 253 g~lyv~gg~~~~i-~~yD~~~~~W~~~~~--~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~ 328 (387)
|.|++... ..+ ..||++++++..... +++... ..+++.. +|.|++-+ ...|..||+++.+++.......+.
T Consensus 550 g~lWi~T~--~Glv~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~~~dGl~ 624 (781)
T 3v9f_A 550 GQMWLATG--EGLVCFPSARNFDYQVFQRKEGLPNTH-IRAISEDKNGNIWAST--NTGISCYITSKKCFYTYDHSNNIP 624 (781)
T ss_dssp SCEEEEET--TEEEEESCTTTCCCEEECGGGTCSCCC-CCEEEECSSSCEEEEC--SSCEEEEETTTTEEEEECGGGTCC
T ss_pred CCEEEEEC--CCceEEECCCCCcEEEccccCCCCCce-EEEEEECCCCCEEEEc--CCceEEEECCCCceEEecccCCcc
Confidence 78887654 346 899999998876542 222221 2334433 57788764 345999999999887765432222
Q ss_pred C-----ceEEEEeCCeEEEEecCCCeEEEEeccC
Q 016552 329 G-----ARHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 329 ~-----~~~~~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
. ...+..-+|.|++-+. .++..||++.
T Consensus 625 ~~~f~~~~~~~~~~G~l~~g~~--~Gl~~f~p~~ 656 (781)
T 3v9f_A 625 QGSFISGCVTKDHNGLIYFGSI--NGLCFFNPDI 656 (781)
T ss_dssp SSCEEEEEEEECTTSCEEEEET--TEEEEECSCC
T ss_pred ccccccCceEECCCCEEEEECC--CceEEEChhh
Confidence 1 1222223567666432 3578888774
No 186
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.54 E-value=0.2 Score=49.38 Aligned_cols=122 Identities=11% Similarity=0.101 Sum_probs=74.4
Q ss_pred eeEEEeCCEEEEEecCCCCCCCCCcceEEEEEC-CCCccccCeEEcCCCCCCCcc-----ccceEEEEECCEEEEEeeeC
Q 016552 189 CAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDL-MNGEKNSRWEKTGELKDGRFS-----REAIDAVGWKGKLCLVNVKG 262 (387)
Q Consensus 189 ~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~-~~~~~~~~W~~~~~~p~~~~~-----~~~~~~~~~~g~lyv~gg~~ 262 (387)
...++.+++||+....+ ..+.++|. .+++.. |+.-...+..... ......++.+++||+....
T Consensus 56 ~~P~v~~g~vyv~~~~~--------~~v~AlD~~~tG~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d- 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP--------NNTYALNLNDPGKIV--WQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN- 124 (571)
T ss_dssp SCCEEETTEEEEECSTT--------TCEEEEETTCTTSEE--EEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-
T ss_pred cccEEECCEEEEEeCCC--------CEEEEEeCCCCccEE--EEEcCCCCccccccccccccccccEEECCEEEEEeCC-
Confidence 34456799999985421 26788999 888866 9875433211100 0011235679999987543
Q ss_pred CeEEEEECCCC--ceeecccccccCCC-CcEEEEeCCeEEEEeCC-----CCeEEEEeCCCC--ceeEc
Q 016552 263 AEGAVYDVVAN--TWDDMREGMVRGWR-GPVAAMDEEVLYGIDEN-----SCTLSRYDEVMD--DWKEV 321 (387)
Q Consensus 263 ~~i~~yD~~~~--~W~~~~~~~~~~~~-~~~~~~~~~~ly~~~~~-----~~~l~~yd~~~~--~W~~v 321 (387)
..+.++|.+++ .|+.-......+.. ..+.++.++.+|+-... .+.|++||.+++ .|+.-
T Consensus 125 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 47999999887 58753221111111 12334568888876532 578999999876 47653
No 187
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.53 E-value=0.2 Score=48.95 Aligned_cols=146 Identities=9% Similarity=0.001 Sum_probs=81.5
Q ss_pred EEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--C-CEEEEEeeeCCeEEEEECCCCc
Q 016552 198 VYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--K-GKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 198 iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~-g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
+++.|+.+. .+.+||..+.+ -... +...........++.+ + +++.+.++.+..+.+||..+++
T Consensus 175 ~l~~~~~d~--------~v~vwd~~~~~----~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 175 RSMTVGDDG--------SVVFYQGPPFK----FSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp EEEEEETTT--------EEEEEETTTBE----EEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred EEEEEeCCC--------cEEEEeCCCcc----eeee--ecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 666666544 78889977665 3221 1111010001222322 4 6777777766789999998775
Q ss_pred eeecc-cc-cccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEcccccc--c-cCceEEEEeCCeEEEEecCCCe
Q 016552 275 WDDMR-EG-MVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDL--L-KGARHAAAGGGRVCAVCENGGG 349 (387)
Q Consensus 275 W~~~~-~~-~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~--~-~~~~~~~~~~g~i~v~gg~~~~ 349 (387)
-...- .. ........+++..++.+++.++.++.+..||.++.+-......+. . .....+...++..++.|+.++.
T Consensus 241 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 320 (615)
T 1pgu_A 241 FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 320 (615)
T ss_dssp EEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSC
T ss_pred EeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCC
Confidence 43221 10 011111223333366677777778899999998775443322221 1 1122233337778888888888
Q ss_pred EEEEeccC
Q 016552 350 IVVVDVKA 357 (387)
Q Consensus 350 i~~~d~~~ 357 (387)
+.+||+.+
T Consensus 321 i~~~d~~~ 328 (615)
T 1pgu_A 321 LNFYELGH 328 (615)
T ss_dssp EEEEETTE
T ss_pred EEEEECCC
Confidence 99999884
No 188
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.50 E-value=0.48 Score=48.54 Aligned_cols=170 Identities=8% Similarity=0.003 Sum_probs=97.1
Q ss_pred ccEEEeccCCceeeCCCC----CCCCcceeEEE-eCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCC--C
Q 016552 165 RPLIFDPICRTWTFGPEL----VTPRRWCAAGC-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGEL--K 237 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~----p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~--p 237 (387)
.+++||+.+++++..... +... ..+... -++.|++... .-+.+||+.+++ |...... +
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~-v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~----~~~~~~~~~~ 492 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNEN-VYAILPDGEGNLWLGTL----------SALVRFNPEQRS----FTTIEKEKDG 492 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSC-EEEEEECSSSCEEEEES----------SCEEEEETTTTE----EEECCBCTTC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCe-eEEEEECCCCCEEEEec----------CceeEEeCCCCe----EEEccccccc
Confidence 479999999988776431 1111 112222 2567877532 146789999998 8877533 1
Q ss_pred CCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccc-----ccccCCCCcEEEE-eCCeEEEEeCCCCeEE
Q 016552 238 DGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMRE-----GMVRGWRGPVAAM-DEEVLYGIDENSCTLS 309 (387)
Q Consensus 238 ~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~-----~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~ 309 (387)
.. .......+... +|.|++... ..+..||+.++++ .... .++.. ...+++. .+|.|++-.. +.|.
T Consensus 493 ~~-~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT~--~Gl~ 565 (795)
T 4a2l_A 493 TP-VVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKL-FTNCIYEASNGIIWVGTR--EGFY 565 (795)
T ss_dssp CB-CCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGS-CEEEEEECTTSCEEEEES--SCEE
T ss_pred cc-cCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCC-eeEEEEECCCCCEEEEeC--CCce
Confidence 11 11011223333 577887654 3689999998887 3321 11111 1122333 3567877643 3799
Q ss_pred EEeCCCCceeEccccccccC-ce-EEEE-eCCeEEEEecCCCeEEEEeccCC
Q 016552 310 RYDEVMDDWKEVVKSDLLKG-AR-HAAA-GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 310 ~yd~~~~~W~~v~~~~~~~~-~~-~~~~-~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.||+++++++.......+.. .. +++. -+|.|++.+ ..++..||+.+.
T Consensus 566 ~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~ 615 (795)
T 4a2l_A 566 CFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNPETE 615 (795)
T ss_dssp EEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTT
T ss_pred eECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcCCCC
Confidence 99999998887654332222 12 2222 257788775 356778887755
No 189
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.48 E-value=0.37 Score=51.93 Aligned_cols=144 Identities=13% Similarity=0.141 Sum_probs=77.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCc--ceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR--WCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~--~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++..++.|+.+ ..+.+||..+.+-.. .+..... ...+..-+++..+.|+.+. .+.+||..+
T Consensus 626 ~~~~l~s~~~d-------~~i~vw~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~~~d~--------~v~vwd~~~ 688 (1249)
T 3sfz_A 626 DGQRIASCGAD-------KTLQVFKAETGEKLL--DIKAHEDEVLCCAFSSDDSYIATCSADK--------KVKIWDSAT 688 (1249)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTT
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCCEEE--EeccCCCCEEEEEEecCCCEEEEEeCCC--------eEEEEECCC
Confidence 56667777643 258899998875432 1111111 1112223567777776544 789999988
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE----CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeE
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW----KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVL 298 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~----~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l 298 (387)
++ -...-.-.... ..++.+ ++.+.+.++.+..+.+||..++.-...-..... ...++++ .++.+
T Consensus 689 ~~----~~~~~~~~~~~-----v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~--~v~~~~~sp~~~~ 757 (1249)
T 3sfz_A 689 GK----LVHTYDEHSEQ-----VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN--SVNHCRFSPDDEL 757 (1249)
T ss_dssp CC----EEEEEECCSSC-----EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS--CEEEEEECSSTTE
T ss_pred Cc----eEEEEcCCCCc-----EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC--CEEEEEEecCCCE
Confidence 87 43322111111 222332 334555566667899999988764322110111 1112222 24556
Q ss_pred EEEeCCCCeEEEEeCCCCc
Q 016552 299 YGIDENSCTLSRYDEVMDD 317 (387)
Q Consensus 299 y~~~~~~~~l~~yd~~~~~ 317 (387)
++.++.++.+..||..+..
T Consensus 758 l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 758 LASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp EEEEESSSEEEEEEGGGTE
T ss_pred EEEEECCCeEEEEeCCCCc
Confidence 6666667888888887653
No 190
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.47 E-value=0.3 Score=42.29 Aligned_cols=219 Identities=11% Similarity=-0.014 Sum_probs=106.9
Q ss_pred CCeEEEEEeCCCCCeecCCCCCCCCcccccccCCCccccccceEEE-EECCEEEEEecccCCCCCCCCccEEEeccC-Cc
Q 016552 98 TPIHLFTFDPVSSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLV-SLSGKLILLAATTHNFNPALTRPLIFDPIC-RT 175 (387)
Q Consensus 98 ~~~~~~~~d~~~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t-~~ 175 (387)
....++++|..++....+...... . ..+. ..+++.+++++ . ..++++|..+ .+
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~--v---------------~~~~~spdg~~l~~~~-~-------~~i~~~d~~~~~~ 74 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPEL--F---------------EAPNWSPDGKYLLLNS-E-------GLLYRLSLAGDPS 74 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSC--C---------------EEEEECTTSSEEEEEE-T-------TEEEEEESSSCCS
T ss_pred cceeEEEEeCCCCceeeeccCCcc--e---------------EeeEECCCCCEEEEEc-C-------CeEEEEeCCCCCC
Confidence 344688889887765543322210 0 1222 23455555544 1 3689999999 87
Q ss_pred eeeCCCCCCCC-cceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCE
Q 016552 176 WTFGPELVTPR-RWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGK 254 (387)
Q Consensus 176 W~~l~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~ 254 (387)
...+....... .......-+++.+++++... .....++.+|..+.. -..+..... . ......-+|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~----~~~~~l~~~~~~~~~----~~~~~~~~~---~--~~~~~spdg~ 141 (297)
T 2ojh_A 75 PEKVDTGFATICNNDHGISPDGALYAISDKVE----FGKSAIYLLPSTGGT----PRLMTKNLP---S--YWHGWSPDGK 141 (297)
T ss_dssp CEECCCTTCCCBCSCCEECTTSSEEEEEECTT----TSSCEEEEEETTCCC----CEECCSSSS---E--EEEEECTTSS
T ss_pred ceEeccccccccccceEECCCCCEEEEEEeCC----CCcceEEEEECCCCc----eEEeecCCC---c--cceEECCCCC
Confidence 77665433212 12222233555555554322 123477888887777 555543221 0 0111222555
Q ss_pred -EEEEeeeCC--eEEEEECCCCceeecccccccCCCCcEEEE-eCCe-EEEEeCCCC--eEEEEeCCCCceeEccccccc
Q 016552 255 -LCLVNVKGA--EGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEV-LYGIDENSC--TLSRYDEVMDDWKEVVKSDLL 327 (387)
Q Consensus 255 -lyv~gg~~~--~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~-ly~~~~~~~--~l~~yd~~~~~W~~v~~~~~~ 327 (387)
|++.+.... .++.+|..+.....+... .. ....++. .+++ |++.....+ .++.++..+.....+......
T Consensus 142 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~--~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 218 (297)
T 2ojh_A 142 SFTYCGIRDQVFDIYSMDIDSGVETRLTHG-EG--RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG 218 (297)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEECCCS-SS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE
T ss_pred EEEEEECCCCceEEEEEECCCCcceEcccC-CC--ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc
Confidence 444444443 455566777666554431 11 1122232 2444 555543333 567777666666555432211
Q ss_pred cCceEEEEeCCeEEEEecC-C----------CeEEEEeccCC
Q 016552 328 KGARHAAAGGGRVCAVCEN-G----------GGIVVVDVKAA 358 (387)
Q Consensus 328 ~~~~~~~~~~g~i~v~gg~-~----------~~i~~~d~~~~ 358 (387)
........+|+.+++++. + ..++++|..+.
T Consensus 219 -~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 219 -DWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp -EEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred -cCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 111122345655444432 1 45888888765
No 191
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.45 E-value=0.58 Score=43.63 Aligned_cols=185 Identities=5% Similarity=-0.019 Sum_probs=93.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++..++.|+.++ .+.+||..+++-... +........+...++.+.+.|+.+. .+..+|..+..
T Consensus 158 dg~~lasgs~Dg-------~v~iWd~~~~~~~~~--~~~h~~~v~~~s~~~~~l~sgs~d~--------~i~~~d~~~~~ 220 (420)
T 4gga_A 158 EGNYLAVGTSSA-------EVQLWDVQQQKRLRN--MTSHSARVGSLSWNSYILSSGSRSG--------HIHHHDVRVAE 220 (420)
T ss_dssp TSSEEEEEETTS-------CEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETTS--------EEEEEETTSSS
T ss_pred CCCEEEEEECCC-------eEEEEEcCCCcEEEE--EeCCCCceEEEeeCCCEEEEEeCCC--------ceeEeeecccc
Confidence 466777776433 588999988754332 2222222334455677777777654 66777776654
Q ss_pred cccCeEE--cCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCce--eecccccccCCCCc--EEEEe--CCe
Q 016552 226 KNSRWEK--TGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTW--DDMREGMVRGWRGP--VAAMD--EEV 297 (387)
Q Consensus 226 ~~~~W~~--~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W--~~~~~~~~~~~~~~--~~~~~--~~~ 297 (387)
... +...... . .......+|...+.++.++.+.++|..+++= ..+.. .....+. +++.+ ++.
T Consensus 221 ----~~~~~~~~h~~~-~---~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~--~~~~~~~V~~~~~~p~~~~ 290 (420)
T 4gga_A 221 ----HHVATLSGHSQE-V---CGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT--FTQHQGAVKAVAWCPWQSN 290 (420)
T ss_dssp ----CEEEEEECCSSC-E---EEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEE--ECCCSSCEEEEEECTTCTT
T ss_pred ----eeeEEecccccc-e---eeeeecCCCCeeeeeeccccceEEeeccccccceeeee--ecccCCceeeeeeCCCccc
Confidence 221 1111111 0 0112223566666666667888888876532 11111 1111111 22222 344
Q ss_pred EEEE-eC-CCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEE-ec-CCCeEEEEeccCC
Q 016552 298 LYGI-DE-NSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAV-CE-NGGGIVVVDVKAA 358 (387)
Q Consensus 298 ly~~-~~-~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~-gg-~~~~i~~~d~~~~ 358 (387)
+++. ++ .++.|..||..++.-........ .....+...+++.+++ +| ..+.|.+||..+.
T Consensus 291 ~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 291 VLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp EEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred EEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 5444 33 45789999998875433222111 1112223334444444 34 3577999998754
No 192
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.44 E-value=0.098 Score=52.74 Aligned_cols=186 Identities=11% Similarity=0.075 Sum_probs=94.1
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCC-cceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPR-RWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+++.|+.+ ..+.+||..+..-... +.... ...+.+ ..+++.++.|+.+. .+.+||...
T Consensus 441 ~g~~l~sgs~D-------g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D~--------~i~iwd~~~ 503 (694)
T 3dm0_A 441 DGQFALSGSWD-------GELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRDR--------TIKLWNTLG 503 (694)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETTS--------CEEEECTTS
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcceeE--EeCCCCCEEEEEEeCCCCEEEEEeCCC--------EEEEEECCC
Confidence 45666666643 3678899887653321 11111 111122 23556667776644 677888755
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--CC--EEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeE
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KG--KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVL 298 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g--~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~l 298 (387)
.. =..+....... .....++.+ ++ .+.+.++.+..+.+||+.+.+-...-... .....++++ .++++
T Consensus 504 ~~----~~~~~~~~~~h--~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h--~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 504 EC----KYTISEGGEGH--RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGH--TGYVSTVAVSPDGSL 575 (694)
T ss_dssp CE----EEEECSSTTSC--SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSE
T ss_pred Cc----ceeeccCCCCC--CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCC--CCCEEEEEEeCCCCE
Confidence 43 22221111111 111223333 22 34555666678999999876533211100 111123333 25677
Q ss_pred EEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 299 YGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 299 y~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++.++.++.|.+||..+..- +........-.++....+..+++++....|.+||+.+.
T Consensus 576 l~sg~~Dg~i~iwd~~~~~~--~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 576 CASGGKDGVVLLWDLAEGKK--LYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESK 633 (694)
T ss_dssp EEEEETTSBCEEEETTTTEE--EECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred EEEEeCCCeEEEEECCCCce--EEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCC
Confidence 77777789999999987742 22222211122233333333444455566999998854
No 193
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.44 E-value=0.61 Score=43.73 Aligned_cols=177 Identities=11% Similarity=0.018 Sum_probs=95.8
Q ss_pred ccEEEeccCCce-eeCCCC---CCCCcceeEEEe-CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCC
Q 016552 165 RPLIFDPICRTW-TFGPEL---VTPRRWCAAGCS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 165 ~~~vyd~~t~~W-~~l~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~ 239 (387)
.++++|+.++.- ..+... ...+....+..- ++.||+... ...+..||+.+.. -..+...+..
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---------~~~I~~~d~~~~~----~~~~~~~~~~ 261 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---------NKNFGRFNVKTQE----VTLIKQLELS 261 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT---------TCEEEEEETTTCC----EEEEEECCCC
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---------CCcEEEEECCCCC----EEEEeccccc
Confidence 688999876532 233111 111112222222 679999421 1378899998876 5544211110
Q ss_pred Cccccc-e-EEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccc-ccC----------CCCc-EEEEe-CCeEEEEe
Q 016552 240 RFSREA-I-DAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGM-VRG----------WRGP-VAAMD-EEVLYGID 302 (387)
Q Consensus 240 ~~~~~~-~-~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~-~~~----------~~~~-~~~~~-~~~ly~~~ 302 (387)
...... . ..++- ++.||+.......+.+||+... ...+.... ..+ ...+ .+++. +|.||+.+
T Consensus 262 g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad 340 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVD 340 (409)
T ss_dssp SCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEE
T ss_pred CCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEe
Confidence 000011 1 23333 5899998766678999998754 22221100 000 1122 33333 56799999
Q ss_pred C-CCCeEEEEeCCCCceeEccccc-------------cccCceEEEE-eCCeEEEEecCCCeEEEEec
Q 016552 303 E-NSCTLSRYDEVMDDWKEVVKSD-------------LLKGARHAAA-GGGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 303 ~-~~~~l~~yd~~~~~W~~v~~~~-------------~~~~~~~~~~-~~g~i~v~gg~~~~i~~~d~ 355 (387)
. ....|.+||+.++.-..+...+ ....+..++. -+|.|||.-..+..|..+++
T Consensus 341 ~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 7 7889999997666555443221 0122343443 34889988777788877765
No 194
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.39 E-value=0.34 Score=43.44 Aligned_cols=180 Identities=7% Similarity=-0.011 Sum_probs=89.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCc-ceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~-~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++..++.|+.+ ..+.+||..+++-.. .+..... ..+.+ .-++.+++.|+.+. .+.+||...
T Consensus 76 dg~~l~s~s~D-------~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~--------~i~vwd~~~ 138 (319)
T 3frx_A 76 DGAYALSASWD-------KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRDK--------TIKVWTIKG 138 (319)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETTS--------CEEEEETTS
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCC
Confidence 45566666643 367889998875322 1111111 11111 22566777777654 678888865
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--------CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-e
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--------KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-D 294 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--------~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~ 294 (387)
.. -..+...... ...+.+ ++.+.+.++.+..+..+|+.+.+-...-. .......+++. .
T Consensus 139 ~~----~~~~~~h~~~------v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~h~~~v~~~~~sp 206 (319)
T 3frx_A 139 QC----LATLLGHNDW------VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI--GHNSNINTLTASP 206 (319)
T ss_dssp CE----EEEECCCSSC------EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC--CCCSCEEEEEECT
T ss_pred Ce----EEEEeccCCc------EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec--CCCCcEEEEEEcC
Confidence 54 3333211110 111111 33355566666789999988754322111 00111122333 3
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEE-EEeCCeEEEEecCCCeEEEEeccC
Q 016552 295 EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHA-AAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 295 ~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
++++++.++.++.|..||..+.+=. ........-..+ ...++.+++. +....+.+|+...
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~v~~~~~sp~~~~la~-~~~~~i~v~~~~~ 267 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAKKAM--YTLSAQDEVFSLAFSPNRYWLAA-ATATGIKVFSLDP 267 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEEE--EEEECCSCEEEEEECSSSSEEEE-EETTEEEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEE--EEecCCCcEEEEEEcCCCCEEEE-EcCCCcEEEEeCc
Confidence 5677777777899999999876422 221111111222 2234555444 3345577776653
No 195
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.39 E-value=0.29 Score=49.20 Aligned_cols=143 Identities=11% Similarity=0.134 Sum_probs=81.1
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEc-CCCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKT-GELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~-~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~ 271 (387)
++++.+.|+.+. .+.+||..+.. -... ...... ..++. .+++..+.++.+..+.++|..
T Consensus 441 ~g~~l~sgs~Dg--------~v~vwd~~~~~----~~~~~~~h~~~------v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 441 DGQFALSGSWDG--------ELRLWDLAAGV----STRRFVGHTKD------VLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp TSSEEEEEETTS--------EEEEEETTTTE----EEEEEECCSSC------EEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCEEEEEeCCC--------cEEEEECCCCc----ceeEEeCCCCC------EEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 567777777654 78999998876 2221 111111 22222 356666666766789999976
Q ss_pred CCceeecccccccCCC--CcEEEEe-CC--eEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEE--EeCCeEEEEe
Q 016552 272 ANTWDDMREGMVRGWR--GPVAAMD-EE--VLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVC 344 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~--~~~~~~~-~~--~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~g~i~v~g 344 (387)
...=..+.. ...+.. ..+++.. ++ .+++.++.++.|.+||..+..-.. .+.........+ ..++++++.|
T Consensus 503 ~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~--~~~~h~~~v~~v~~spdg~~l~sg 579 (694)
T 3dm0_A 503 GECKYTISE-GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS--TLAGHTGYVSTVAVSPDGSLCASG 579 (694)
T ss_dssp SCEEEEECS-STTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCcceeecc-CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE--EEcCCCCCEEEEEEeCCCCEEEEE
Confidence 543222211 111111 1233332 22 355666678899999998764332 222223332223 3467888888
Q ss_pred cCCCeEEEEeccCC
Q 016552 345 ENGGGIVVVDVKAA 358 (387)
Q Consensus 345 g~~~~i~~~d~~~~ 358 (387)
+....|.+||+.+.
T Consensus 580 ~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 580 GKDGVVLLWDLAEG 593 (694)
T ss_dssp ETTSBCEEEETTTT
T ss_pred eCCCeEEEEECCCC
Confidence 88888999999854
No 196
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.38 E-value=0.1 Score=46.54 Aligned_cols=138 Identities=17% Similarity=0.122 Sum_probs=70.2
Q ss_pred CccEEEeccCCceeeCCCCCCC--CcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCC
Q 016552 164 TRPLIFDPICRTWTFGPELVTP--RRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~--r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~ 240 (387)
..+.++|+.+.+-...-.++.. +....+..-++ .+|+.+..+ ..+.+||..+.+ -...-..+...
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~--------~~v~~~d~~~~~----~~~~~~~~~~~ 78 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS--------ESLVKIDLVTGE----TLGRIDLSTPE 78 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT--------TEEEEEETTTCC----EEEEEECCBTT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC--------CeEEEEECCCCC----eEeeEEcCCcc
Confidence 3688899888765442222221 11222222344 678876432 378999998877 43221121100
Q ss_pred --ccccceEEEEECC-EEEEEee-----------eCCeEEEEECCCCceeecccccccCCCCcEEEEe-CC-eEEEEeCC
Q 016552 241 --FSREAIDAVGWKG-KLCLVNV-----------KGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE-VLYGIDEN 304 (387)
Q Consensus 241 --~~~~~~~~~~~~g-~lyv~gg-----------~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~-~ly~~~~~ 304 (387)
.......+..-+| .+|+... ....+.+||+.+.+....-. .+.....+++. ++ .||+.
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~--- 152 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE---APRQITMLAWARDGSKLYGL--- 152 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE---CCSSCCCEEECTTSSCEEEE---
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe---CCCCcceeEECCCCCEEEEe---
Confidence 0000011222355 5776641 13689999998876432211 11111223332 34 46665
Q ss_pred CCeEEEEeCCCCcee
Q 016552 305 SCTLSRYDEVMDDWK 319 (387)
Q Consensus 305 ~~~l~~yd~~~~~W~ 319 (387)
++.+++||.++.+-.
T Consensus 153 ~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 153 GRDLHVMDPEAGTLV 167 (337)
T ss_dssp SSSEEEEETTTTEEE
T ss_pred CCeEEEEECCCCcEe
Confidence 468999999887543
No 197
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.38 E-value=0.62 Score=47.74 Aligned_cols=171 Identities=10% Similarity=0.061 Sum_probs=95.8
Q ss_pred ccEEEeccCCceeeCCCC------CCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCC-C
Q 016552 165 RPLIFDPICRTWTFGPEL------VTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGEL-K 237 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~-p 237 (387)
.+++||+.+++|+..... +...........+++||+... . -+..||+.+++ + ..... .
T Consensus 472 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~--------Gl~~~~~~~~~----~-~~~~~~~ 536 (795)
T 4a2l_A 472 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--E--------GLSVFKQEGLD----I-QKASILP 536 (795)
T ss_dssp CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--S--------CEEEEEEETTE----E-EECCCSC
T ss_pred ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--C--------ceEEEeCCCCe----E-EEecCCC
Confidence 489999999999887543 111111112223567887542 1 35778988888 7 43211 1
Q ss_pred CCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccc--ccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEe
Q 016552 238 DGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMRE--GMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYD 312 (387)
Q Consensus 238 ~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~--~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd 312 (387)
..........++.. +|.|++.... .+..||+.++++..... +++.. ...+++.. +|.|++-+ ...|..||
T Consensus 537 ~~~l~~~~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~~~~~~~~~~gl~~~-~i~~i~~d~~g~lWi~t--~~Gl~~~~ 611 (795)
T 4a2l_A 537 VSNVTKLFTNCIYEASNGIIWVGTRE--GFYCFNEKDKQIKRYNTTNGLPNN-VVYGILEDSFGRLWLST--NRGISCFN 611 (795)
T ss_dssp SCGGGGSCEEEEEECTTSCEEEEESS--CEEEEETTTTEEEEECGGGTCSCS-CEEEEEECTTSCEEEEE--TTEEEEEE
T ss_pred CCCCCCCeeEEEEECCCCCEEEEeCC--CceeECCCCCcEEEeCCCCCCchh-heEEEEECCCCCEEEEc--CCceEEEc
Confidence 11011111233333 5788875432 68999999998876542 22221 11233332 56788775 45799999
Q ss_pred CCCCceeEccccccccC-c---eEEE-EeCCeEEEEecCCCeEEEEeccC
Q 016552 313 EVMDDWKEVVKSDLLKG-A---RHAA-AGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 313 ~~~~~W~~v~~~~~~~~-~---~~~~-~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
+++++++.......+.. . .++. .-+|.|++-+. .++..||++.
T Consensus 612 ~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~--~Gl~~~~p~~ 659 (795)
T 4a2l_A 612 PETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGI--NGITTFRPEL 659 (795)
T ss_dssp TTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEET--TEEEEECGGG
T ss_pred CCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecC--CceEEEcHHH
Confidence 99998887654322221 1 1222 33566666432 3577777764
No 198
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.33 E-value=0.25 Score=50.64 Aligned_cols=174 Identities=9% Similarity=0.045 Sum_probs=98.4
Q ss_pred ccEEEeccCCceeeCCCCC-CCCcceeEEEe-CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc
Q 016552 165 RPLIFDPICRTWTFGPELV-TPRRWCAAGCS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
.+++||+.+++++...... ......+.+.. +++||+... .-+.+||+.+++ |......+.....
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~----~~~~~~~~~~~~~ 493 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH----------AGVFVIDLASKK----VIHHYDTSNSQLL 493 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET----------TEEEEEESSSSS----CCEEECTTTSSCS
T ss_pred CEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC----------CceEEEeCCCCe----EEecccCcccccc
Confidence 4799999999998875321 11112222222 568887532 256889999988 8765432211000
Q ss_pred ccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccc--ccccCCCCcEEEE-eCCeEEEEeCCCCeE-EEEeCCCC
Q 016552 243 REAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMRE--GMVRGWRGPVAAM-DEEVLYGIDENSCTL-SRYDEVMD 316 (387)
Q Consensus 243 ~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~--~~~~~~~~~~~~~-~~~~ly~~~~~~~~l-~~yd~~~~ 316 (387)
.....+... +|.|++... +..+..||+.+++++.... .++.. ...+++. .+|.|++-.. +.+ ..||++++
T Consensus 494 ~~~i~~i~~d~~g~lWigt~-~~Gl~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~T~--~Glv~~~d~~~~ 569 (781)
T 3v9f_A 494 ENFVRSIAQDSEGRFWIGTF-GGGVGIYTPDMQLVRKFNQYEGFCSN-TINQIYRSSKGQMWLATG--EGLVCFPSARNF 569 (781)
T ss_dssp CSCEEEEEECTTCCEEEEES-SSCEEEECTTCCEEEEECTTTTCSCS-CEEEEEECTTSCEEEEET--TEEEEESCTTTC
T ss_pred cceeEEEEEcCCCCEEEEEc-CCCEEEEeCCCCeEEEccCCCCCCCC-eeEEEEECCCCCEEEEEC--CCceEEECCCCC
Confidence 011223333 577876543 2358999999998877643 11111 1122333 3567877653 456 99999999
Q ss_pred ceeEccccccccC--ceEEEE-eCCeEEEEecCCCeEEEEeccCC
Q 016552 317 DWKEVVKSDLLKG--ARHAAA-GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 317 ~W~~v~~~~~~~~--~~~~~~-~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+++.......+.. -.+++. -+|.|++.+. ..+..||+.+.
T Consensus 570 ~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~--~Gl~~~~~~~~ 612 (781)
T 3v9f_A 570 DYQVFQRKEGLPNTHIRAISEDKNGNIWASTN--TGISCYITSKK 612 (781)
T ss_dssp CCEEECGGGTCSCCCCCEEEECSSSCEEEECS--SCEEEEETTTT
T ss_pred cEEEccccCCCCCceEEEEEECCCCCEEEEcC--CceEEEECCCC
Confidence 8877654322221 122322 3577887753 34777887754
No 199
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.28 E-value=0.0022 Score=59.85 Aligned_cols=172 Identities=12% Similarity=0.063 Sum_probs=73.0
Q ss_pred ccEEEeccCC--ceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc
Q 016552 165 RPLIFDPICR--TWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 165 ~~~vyd~~t~--~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
.++.+|..|+ .|+.-. . ......+..++++|+.++.+. .+.++|..+++.. |..-...+.....
T Consensus 20 ~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~dg--------~l~a~d~~tG~~~--w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPNDG--------SLYTLGSKNNEGL--TKLPFTIPELVQA 85 (369)
T ss_dssp EEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTTC--------CEEEC-----CCS--EECSCCHHHHHTT
T ss_pred EEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCCC--------EEEEEECCCCcee--eeeeccCcccccc
Confidence 5888998876 476532 1 111223445677888764433 6788998777644 5532211110000
Q ss_pred ccceEEEEECCEEEEEeeeCCeEEEEECCCC--ceeecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCc--e
Q 016552 243 REAIDAVGWKGKLCLVNVKGAEGAVYDVVAN--TWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDD--W 318 (387)
Q Consensus 243 ~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~--W 318 (387)
...+..++.+|+.+ ....+.++|++++ .|+.-.... . ..+..++.||+. ..++.|++||.++++ |
T Consensus 86 ---sp~~~~~~~v~~g~-~dg~v~a~D~~tG~~~w~~~~~~~--~----~~~p~~~~v~~~-~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 86 ---SPCRSSDGILYMGK-KQDIWYVIDLLTGEKQQTLSSAFA--D----SLSPSTSLLYLG-RTEYTITMYDTKTRELRW 154 (369)
T ss_dssp ---CSCC-----CCCCE-EEEEEEEECCC----------------------------EEEE-EEEEEEECCCSSSSSCCC
T ss_pred ---CceEecCCEEEEEe-CCCEEEEEECCCCcEEEEecCCCc--c----cccccCCEEEEE-ecCCEEEEEECCCCCEEE
Confidence 11111366666533 3347899999876 476432211 0 111145566654 345789999998764 7
Q ss_pred eEccccccccCceEEE---EeCCeEEEEecCCCeEEEEeccCCCCCCceEEe
Q 016552 319 KEVVKSDLLKGARHAA---AGGGRVCAVCENGGGIVVVDVKAAAAPTIFVVD 367 (387)
Q Consensus 319 ~~v~~~~~~~~~~~~~---~~~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~~ 367 (387)
+.-... . ....+. ..++.+|+ +..++.++.+|..++ ...|+..
T Consensus 155 ~~~~~~--~-~~~~~~~~~~~~~~v~~-~~~dg~v~a~d~~tG--~~~W~~~ 200 (369)
T 2hz6_A 155 NATYFD--Y-AASLPEDDVDYKMSHFV-SNGDGLVVTVDSESG--DVLWIQN 200 (369)
T ss_dssp EEEEEE--E-CCBCCCCCTTCCCCEEE-EETSCEEEEECTTTC--CEEEEEE
T ss_pred eEeccc--c-cCccccCCccccceEEE-ECCCCEEEEEECCCC--cEEEEec
Confidence 742211 0 000000 12255655 355567888998743 2468764
No 200
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.24 E-value=0.45 Score=46.54 Aligned_cols=187 Identities=11% Similarity=-0.051 Sum_probs=94.6
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE-eCC-EEEEEecCCCCCCCCCcceEEEEEC--
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRG-AVYVASGIGSQFSSDVAKSVEKWDL-- 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~v~~yd~-- 221 (387)
++.+|+.+..+ ..+.++|..+++-...-+.... .+..+. -++ .+|+.+. + +.+.+||.
T Consensus 148 ~~~~~vs~~~d-------~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~-d--------~~V~v~D~~~ 209 (543)
T 1nir_A 148 PNLFSVTLRDA-------GQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGR-D--------ARIDMIDLWA 209 (543)
T ss_dssp GGEEEEEEGGG-------TEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEET-T--------SEEEEEETTS
T ss_pred CCEEEEEEcCC-------CeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECC-C--------CeEEEEECcC
Confidence 56777776532 3678899988765432111111 222322 244 5676642 1 47899999
Q ss_pred CCCccccCeEEcCCCCCCCccccceEEEEE----CCE-EEEEeeeCCeEEEEECCCCcee-eccc-ccc-c-----CC-C
Q 016552 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW----KGK-LCLVNVKGAEGAVYDVVANTWD-DMRE-GMV-R-----GW-R 287 (387)
Q Consensus 222 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~----~g~-lyv~gg~~~~i~~yD~~~~~W~-~~~~-~~~-~-----~~-~ 287 (387)
.+.+ - +..++..... .+.+..- +|+ +|+.+.....+.++|..+.+-. .++. .+. . .. .
T Consensus 210 ~t~~----~--~~~i~~g~~p--~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 210 KEPT----K--VAEIKIGIEA--RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp SSCE----E--EEEEECCSEE--EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCC
T ss_pred CCCc----E--EEEEecCCCc--ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCc
Confidence 5554 2 2222222111 1222222 564 6666555678999998876432 2221 010 0 00 1
Q ss_pred CcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCc-eEEEEeCCe-EEEEecCCCeEEEEeccCC
Q 016552 288 GPVAAMD--EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGA-RHAAAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 288 ~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~-~~~~~~~g~-i~v~gg~~~~i~~~d~~~~ 358 (387)
..+++.. ++.+|+-...++.|+++|.++.+-..+...+..... .....-+|+ +|+.+...+.|.++|..+.
T Consensus 282 v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred eEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 1223332 456666666678999999877532222222211111 222334555 4444445677888888754
No 201
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.19 E-value=0.25 Score=48.96 Aligned_cols=122 Identities=12% Similarity=0.129 Sum_probs=72.7
Q ss_pred eeEEEeCCEEEEEecCCCCCCCCCcceEEEEEC-CCCccccCeEEcCCCCCCCc---c--ccceEEEE--ECCE----EE
Q 016552 189 CAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDL-MNGEKNSRWEKTGELKDGRF---S--REAIDAVG--WKGK----LC 256 (387)
Q Consensus 189 ~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~-~~~~~~~~W~~~~~~p~~~~---~--~~~~~~~~--~~g~----ly 256 (387)
...++.+++||+....+ ..+.++|. .+++.. |+.-...+.... . ......++ .+++ ||
T Consensus 56 ~tP~v~~g~vyv~~~~~--------~~v~AlD~~~tG~~l--W~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~ 125 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFP--------NNTFALGLDDPGTIL--WQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALIL 125 (599)
T ss_dssp SCCEEETTEEEEECSTT--------TCEEEEETTCTTSEE--EEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEE
T ss_pred eccEEECCEEEEEeCCC--------CEEEEEeCCCCCcEE--EEECCCCCccccccccccccccceEEEecCCcceeEEE
Confidence 34566799999985421 26788999 888866 987654332110 0 00011234 5777 88
Q ss_pred EEeeeCCeEEEEECCCC--ceeecccccccCC-CCcEEEEeCCeEEEEeC-----CCCeEEEEeCCCCc--eeEc
Q 016552 257 LVNVKGAEGAVYDVVAN--TWDDMREGMVRGW-RGPVAAMDEEVLYGIDE-----NSCTLSRYDEVMDD--WKEV 321 (387)
Q Consensus 257 v~gg~~~~i~~yD~~~~--~W~~~~~~~~~~~-~~~~~~~~~~~ly~~~~-----~~~~l~~yd~~~~~--W~~v 321 (387)
+.... ..+.++|.+++ .|+.-......+. ...+.++.+++||+-.. ..+.|++||.++++ |+.-
T Consensus 126 v~t~d-g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 126 KTQLD-GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EECTT-SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEcCC-CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 76543 47999999887 4875322111111 11233456788876432 25789999998764 7754
No 202
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.17 E-value=0.33 Score=48.11 Aligned_cols=177 Identities=8% Similarity=0.049 Sum_probs=94.7
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEE--EeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcC-CC-CCCC
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAG--CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG-EL-KDGR 240 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~-~~-p~~~ 240 (387)
.+.+||..+.+... .+........++ .-++++++.|+.+. .+.+||..+++ -...- .. ....
T Consensus 171 ~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D~--------~i~lwd~~~g~----~~~~~~~~~~~~~ 236 (611)
T 1nr0_A 171 TVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGDG--------TIVLYNGVDGT----KTGVFEDDSLKNV 236 (611)
T ss_dssp CEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCC----EEEECBCTTSSSC
T ss_pred eEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECCC--------cEEEEECCCCc----Eeeeecccccccc
Confidence 46778866544322 222222111122 23677888887655 78889988776 43221 10 0000
Q ss_pred ccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCC-CcEEEEeCCeEEEEeCCCCeEEEEeCCCCc
Q 016552 241 FSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWR-GPVAAMDEEVLYGIDENSCTLSRYDEVMDD 317 (387)
Q Consensus 241 ~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~-~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~ 317 (387)
.......++.+ +|+..+.++.+..+.++|..+.+....-. ...... ....+..++..++.+..++.+..||+++..
T Consensus 237 ~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~ 315 (611)
T 1nr0_A 237 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP-VGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGS 315 (611)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTE
T ss_pred ccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec-CCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCC
Confidence 00011223333 67777777777889999999876543211 010100 111222245555555567889999988765
Q ss_pred eeEccccccccCceEEE--EeCCeEEEEecCCCeEEEEeccCC
Q 016552 318 WKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 318 W~~v~~~~~~~~~~~~~--~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
-.. .+.........+ ..+|+.++.++....|.+||+.+.
T Consensus 316 ~~~--~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 316 IDQ--VRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp EEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cce--EEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 222 122222222222 346788888888888999998754
No 203
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.17 E-value=0.55 Score=44.00 Aligned_cols=177 Identities=10% Similarity=0.018 Sum_probs=91.3
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccc
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~ 243 (387)
..++++|..+..-+.+..... ......-.-+++.+++++.+. ....+.++|..+++ ...+...+...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~-~v~~~~~Spdg~~la~~s~~~-----~~~~i~~~d~~tg~----~~~l~~~~~~~--- 225 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ-PLMSPAWSPDGSKLAYVTFES-----GRSALVIQTLANGA----VRQVASFPRHN--- 225 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS-CEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTTCC----EEEEECCSSCE---
T ss_pred ceEEEEcCCCCCCEEEeCCCC-cceeeEEcCCCCEEEEEEecC-----CCcEEEEEECCCCc----EEEeecCCCcc---
Confidence 568889987655444432111 111111122555545544432 12478999999988 76655433211
Q ss_pred cceEEEEECCE-EEEEeeeC--CeEEEEECCCCceeecccccccCCCCcEEEE-eCCe-EEEEeCCCC--eEEEEeCCCC
Q 016552 244 EAIDAVGWKGK-LCLVNVKG--AEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEV-LYGIDENSC--TLSRYDEVMD 316 (387)
Q Consensus 244 ~~~~~~~~~g~-lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~-ly~~~~~~~--~l~~yd~~~~ 316 (387)
...+..-||+ |++.+..+ ..++.+|+.+++...+... .. ....++. -+|+ |++.....+ .|+.||.++.
T Consensus 226 -~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~-~~--~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 226 -GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG-RS--NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp -EEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC-SS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred -cCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCC-CC--cccceEECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 0112223565 44443322 5699999998877655431 11 1122332 2444 555543233 6999999887
Q ss_pred ceeEccccccccCceEEEEeCCeEEEEecC---CCeEEEEeccCC
Q 016552 317 DWKEVVKSDLLKGARHAAAGGGRVCAVCEN---GGGIVVVDVKAA 358 (387)
Q Consensus 317 ~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~---~~~i~~~d~~~~ 358 (387)
.-..+..... .........+|+.++++.. ...++++|+.+.
T Consensus 302 ~~~~l~~~~~-~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 302 APQRITWEGS-QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp CCEECCCSSS-EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred CEEEEecCCC-cccCeEECCCCCEEEEEECcCCceEEEEEECCCC
Confidence 6444332111 1112223346665555442 357899999865
No 204
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.16 E-value=0.59 Score=41.11 Aligned_cols=136 Identities=7% Similarity=0.032 Sum_probs=73.6
Q ss_pred ccEEEeccCCceeeCCCCCCCCc-cee-EEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc
Q 016552 165 RPLIFDPICRTWTFGPELVTPRR-WCA-AGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~-~~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
.+.++|..|++-.+.-.+..... ..+ +..-+++.++.|+.+. .+.+||..+++ -.........
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg--------~v~iw~~~~~~----~~~~~~~h~~--- 110 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQQK----RLRNMTSHSA--- 110 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTE----EEEEEECCSS---
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC--------cEEEeecCCce----eEEEecCccc---
Confidence 68999999987665433332221 112 2223667778877654 78899998887 3322211111
Q ss_pred ccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCc
Q 016552 243 REAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDD 317 (387)
Q Consensus 243 ~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~ 317 (387)
...+...++.+.+.++....+..++..+......................++.+++.+..++.+.+||.++.+
T Consensus 111 --~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 111 --RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp --CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred --eEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 1334445566656665556677777665543322110001100111122345666666678899999997653
No 205
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.16 E-value=0.98 Score=43.75 Aligned_cols=180 Identities=8% Similarity=0.047 Sum_probs=95.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++..++.++.+ ..+.++|..+..-..+..... .....+..-+++.++.|+.+. .+.+||.....
T Consensus 314 ~~~~l~t~~~d-------~~i~~w~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~~~~dg--------~v~~~~~~~~~ 377 (577)
T 2ymu_A 314 DGQTIASASDD-------KTVKLWNRNGQHLQTLTGHSS-SVWGVAFSPDGQTIASASDDK--------TVKLWNRNGQL 377 (577)
T ss_dssp TSSEEEEEETT-------SCEEEEETTSCEEEEECCCSS-CEEEEEECTTSSEEEEEETTS--------EEEEEETTCCE
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeEEEeCCCC-CEEEEEECCCCCEEEEEeCCC--------EEEEEcCCCCE
Confidence 34555555532 246778876665444332111 111112223566667666543 67788865444
Q ss_pred cccCeEEcCCCCCCCccccceEEE--EECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEe
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAV--GWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGID 302 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~--~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~ 302 (387)
-..+...... ..++ .-+|+..+.++.+..+.+||.....-..+.. . .....++++ .++++++.+
T Consensus 378 ----~~~~~~~~~~------v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~-~--~~~v~~~~~s~d~~~l~~~ 444 (577)
T 2ymu_A 378 ----LQTLTGHSSS------VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG-H--SSSVWGVAFSPDDQTIASA 444 (577)
T ss_dssp ----EEEEECCSSC------EEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEEC-C--SSCEEEEEECTTSSEEEEE
T ss_pred ----EEEecCCCCC------eEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecC-C--CCCeEEEEECCCCCEEEEE
Confidence 3333321111 2222 2367766677666788999865433222221 1 111122333 256666777
Q ss_pred CCCCeEEEEeCCCCceeEccccccccCce--EEEEeCCeEEEEecCCCeEEEEeccC
Q 016552 303 ENSCTLSRYDEVMDDWKEVVKSDLLKGAR--HAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 303 ~~~~~l~~yd~~~~~W~~v~~~~~~~~~~--~~~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
+.++.+..||.....-..+. ...... .....++++++.++....|.+||...
T Consensus 445 ~~d~~v~~w~~~~~~~~~~~---~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~ 498 (577)
T 2ymu_A 445 SDDKTVKLWNRNGQLLQTLT---GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 498 (577)
T ss_dssp ETTSEEEEEETTSCEEEEEE---CCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred cCCCEEEEEECCCCEEEEEc---CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC
Confidence 67889999997665333322 222222 22334788888888888899999663
No 206
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.14 E-value=0.4 Score=49.18 Aligned_cols=175 Identities=12% Similarity=0.022 Sum_probs=92.3
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEc-C-CCCCCC
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKT-G-ELKDGR 240 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~-~-~~p~~~ 240 (387)
.+..++.....+..+.+- .+...+.+. .+++||++-.. ...|..+++...........+ . .+..+.
T Consensus 405 ~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~~lY~sD~~--------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp SEEEECTTSCCCEEEECS--CSSEEEEEEETTTTEEEEEETT--------TTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ceeEeeccCCcceeeecC--CCceEEEeecccCCeeEEeecc--------ceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 345556655555544221 111122222 25789998432 235677776542100003332 2 222111
Q ss_pred ccccceEEEE-ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc-EEEE--eCCeEEEEeCC-CCeEEEEeCCC
Q 016552 241 FSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAM--DEEVLYGIDEN-SCTLSRYDEVM 315 (387)
Q Consensus 241 ~~~~~~~~~~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~--~~~~ly~~~~~-~~~l~~yd~~~ 315 (387)
..++- .+++||+.......|.++|+....-+.+.. .....+ .+++ .++.||+.+.. ...|++.+++.
T Consensus 475 -----GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~---~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 475 -----GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp -----EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred -----eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe---CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 11222 357999987766889999998765544422 111122 3444 35799999843 37899999987
Q ss_pred CceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccCC
Q 016552 316 DDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 316 ~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
..=+.+.. ..+..+.+++. .+++||++=.....|.++|++..
T Consensus 547 ~~~~~lv~-~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 547 VDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp CCEEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEe-CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 64443332 12223333333 46888888666677888877643
No 207
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.07 E-value=1.3 Score=43.98 Aligned_cols=183 Identities=12% Similarity=-0.023 Sum_probs=107.5
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.||+.-- ....++++++.....+.+..-...+.. ..++ .+++||+.-.. ...+++.++..
T Consensus 360 ~~~ly~sD~-------~~~~I~r~~~~g~~~~~v~~~~~~~p~-GlAvD~~~~~lY~tD~~--------~~~I~v~~~~G 423 (619)
T 3s94_A 360 EGYIYWTDD-------EVRAIRRSFIDGSGSQFVVTAQIAHPD-GIAVDWVARNLYWTDTG--------TDRIEVTRLNG 423 (619)
T ss_dssp TTEEEEEET-------TTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETT--------TTEEEEEETTS
T ss_pred CCeEEEEeC-------CCCeEEEEEcCCCccEEEEECCCCCcC-ceEEecccCcEEEEeCC--------CCcEEEEeCCC
Confidence 467777632 224577777776555544322211111 2333 37899998322 34788888876
Q ss_pred CccccCeEEcC--CCCCCCccccceEEEEE---CCEEEEEee-eCCeEEEEECCCCceeecccccccCCCCcEEEEe--C
Q 016552 224 GEKNSRWEKTG--ELKDGRFSREAIDAVGW---KGKLCLVNV-KGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--E 295 (387)
Q Consensus 224 ~~~~~~W~~~~--~~p~~~~~~~~~~~~~~---~g~lyv~gg-~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~ 295 (387)
.. -..+. .+..| .++++ +|.||+..- ....|+..++.-..=..+... ...+. .++++. +
T Consensus 424 ~~----~~~l~~~~l~~P-------~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~-~l~~P-~GlalD~~~ 490 (619)
T 3s94_A 424 TM----RKILISEDLEEP-------RAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNT-SLGWP-NGLALDYDE 490 (619)
T ss_dssp CS----CEEEECTTCCSE-------EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS-SCSCE-EEEEEETTT
T ss_pred Ce----EEEEEECCCCCe-------eeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeC-CCCCC-eeeEEcccC
Confidence 54 33332 22222 23333 589998863 235788888764322222110 11111 234444 6
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 296 EVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 296 ~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++||+.+...+.|..+|++...=+.+.. .....+++++..++.||+.-.....|..+|..++
T Consensus 491 ~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 491 GKIYWGDAKTDKIEVMNTDGTGRRVLVE-DKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp TEEEEEETTTTEEEEEESSSCCCEEEEE-CCCCSSCCEEEETTEEEEECTTSSCEEEEESSSC
T ss_pred CEEEEEECCCCEEEEEecCCCceEEEec-cCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCC
Confidence 8999999888899999997654333322 2234566778889999999667788888888765
No 208
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.03 E-value=0.0021 Score=63.77 Aligned_cols=34 Identities=18% Similarity=0.510 Sum_probs=25.9
Q ss_pred CCCCCCChHHHHHHHhhhcC----chhhhhhhHhhhhh
Q 016552 40 QPLLPGLPDHIAHLCLSHVH----PSILHNVCHSWRRL 73 (387)
Q Consensus 40 ~~~~~~LPddl~~~iL~rLP----l~~~r~VcK~W~~l 73 (387)
...|..||||++.+||.+|| ..+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46789999999999999999 68999999999988
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.01 E-value=0.42 Score=42.50 Aligned_cols=184 Identities=13% Similarity=0.021 Sum_probs=93.5
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCcc
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEK 226 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~ 226 (387)
+.||+.+.. ...+++||+ ++..+.+.. +.......+..-++++|+..... ..+..||+. ++
T Consensus 57 ~~l~~~d~~-------~~~i~~~~~-~g~~~~~~~-~~~~~~gl~~d~dG~l~v~~~~~--------~~v~~~~~~-g~- 117 (305)
T 3dr2_A 57 RTLVWSDLV-------GRRVLGWRE-DGTVDVLLD-ATAFTNGNAVDAQQRLVHCEHGR--------RAITRSDAD-GQ- 117 (305)
T ss_dssp TEEEEEETT-------TTEEEEEET-TSCEEEEEE-SCSCEEEEEECTTSCEEEEETTT--------TEEEEECTT-SC-
T ss_pred CEEEEEECC-------CCEEEEEeC-CCCEEEEeC-CCCccceeeECCCCCEEEEECCC--------CEEEEECCC-CC-
Confidence 347776542 135788888 444443321 11111111222367888764221 257778875 55
Q ss_pred ccCeEEcCCCCCC-CccccceEEEEECCEEEEEe---ee--------------CCeEEEEECCCCceeecccccccCCCC
Q 016552 227 NSRWEKTGELKDG-RFSREAIDAVGWKGKLCLVN---VK--------------GAEGAVYDVVANTWDDMREGMVRGWRG 288 (387)
Q Consensus 227 ~~~W~~~~~~p~~-~~~~~~~~~~~~~g~lyv~g---g~--------------~~~i~~yD~~~~~W~~~~~~~~~~~~~ 288 (387)
...+...... ........++--+|++|+.. |. ...++.||+++++.+.+. .... .
T Consensus 118 ---~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~---p 190 (305)
T 3dr2_A 118 ---AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH---P 190 (305)
T ss_dssp ---EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS---E
T ss_pred ---EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC---C
Confidence 5554321111 11101122333478899852 11 146899999888877654 2211 1
Q ss_pred cEEEEe-CC-eEEEEeCCC-----CeEEEEeCCCCceeEcc---ccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 289 PVAAMD-EE-VLYGIDENS-----CTLSRYDEVMDDWKEVV---KSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 289 ~~~~~~-~~-~ly~~~~~~-----~~l~~yd~~~~~W~~v~---~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
..+++. ++ .||+.+... +.|++||.+.+...... ..+........+..+|+|++.. +..|.+||+...
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~--~~gv~~~~~~g~ 268 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS--GTGVCVFDSDGQ 268 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC--SSEEEEECTTSC
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec--CCcEEEECCCCC
Confidence 233332 34 588887542 68999998766422111 1111111122334567777764 446899998754
No 210
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.00 E-value=0.3 Score=45.77 Aligned_cols=173 Identities=11% Similarity=0.018 Sum_probs=92.3
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEc-C-CCCCCC
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKT-G-ELKDGR 240 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~-~-~~p~~~ 240 (387)
.+.+.|+.+..+..+.+ ......+.+. .+++||+.--. ...+..+++...........+ . .+..+
T Consensus 93 ~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~--------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p- 161 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSSYDTVISRDIQAP- 161 (400)
T ss_dssp EEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT--------TTEEEEEEC------CCCEEEECSSCSCE-
T ss_pred eeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC--------CCeEEEEEcccCCCCCcceEEEeCCCCCc-
Confidence 45666776666655422 1122222332 25799997432 236777887642100002222 2 11111
Q ss_pred ccccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc-EEEE--eCCeEEEEeCC-CCeEEEEeCC
Q 016552 241 FSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAM--DEEVLYGIDEN-SCTLSRYDEV 314 (387)
Q Consensus 241 ~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~--~~~~ly~~~~~-~~~l~~yd~~ 314 (387)
...++ .++.||+.......|.++|++...-..+.. .....+ .+++ .++.||+.+.. .+.|++++++
T Consensus 162 -----~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~---~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 162 -----DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp -----EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE---CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred -----ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe---CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 11222 378999997766789999998765444322 111222 3444 36899998743 4689999998
Q ss_pred CCceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccC
Q 016552 315 MDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 315 ~~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
...=+.+.. .....+..++. .+++||+.=.....|..+|.+.
T Consensus 234 G~~~~~~~~-~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 234 GVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp SCSCEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCccEEEEE-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 753333221 12222333333 3678888866667788888764
No 211
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.95 E-value=0.78 Score=44.47 Aligned_cols=170 Identities=5% Similarity=-0.040 Sum_probs=88.2
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccc
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~ 243 (387)
.+.++|......+.+..... ...+.+ .-+++.++.++.+. .+.++|..... -..+.......
T Consensus 285 ~i~~w~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~t~~~d~--------~i~~w~~~~~~----~~~~~~~~~~v--- 347 (577)
T 2ymu_A 285 TVKLWNRNGQLLQTLTGHSS--SVWGVAFSPDGQTIASASDDK--------TVKLWNRNGQH----LQTLTGHSSSV--- 347 (577)
T ss_dssp CEEEEETTSCEEEEECCCSS--CEEEEEECTTSSEEEEEETTS--------CEEEEETTSCE----EEEECCCSSCE---
T ss_pred EEEEEeCCCcEEEEEecCCC--CeEEEEECCCCCEEEEEeCCC--------eEEEEeCCCCe----eEEEeCCCCCE---
Confidence 45667765544443322111 111122 22456666665533 56778876665 44433221110
Q ss_pred cceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEcc
Q 016552 244 EAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVV 322 (387)
Q Consensus 244 ~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~ 322 (387)
...+..-+|+..+.+..+..+.+||.....-..+.. . .....++++ .+++.++.++.++.+..||.....-..
T Consensus 348 -~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~-~--~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~-- 421 (577)
T 2ymu_A 348 -WGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG-H--SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT-- 421 (577)
T ss_dssp -EEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEEC-C--SSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEE--
T ss_pred -EEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecC-C--CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEE--
Confidence 011222367776776666788899965544333321 1 111122333 356666677677889999965443222
Q ss_pred ccccccCceE--EEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 323 KSDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 323 ~~~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+........ ....+++.++.++....+.+||....
T Consensus 422 -~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~ 458 (577)
T 2ymu_A 422 -LTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ 458 (577)
T ss_dssp -EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC
T ss_pred -ecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 222222222 23346788888788888999997643
No 212
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.93 E-value=0.72 Score=39.73 Aligned_cols=175 Identities=10% Similarity=-0.077 Sum_probs=87.0
Q ss_pred CCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCC-CccccCeEEcCCCCCCC
Q 016552 162 ALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMN-GEKNSRWEKTGELKDGR 240 (387)
Q Consensus 162 ~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~-~~~~~~W~~~~~~p~~~ 240 (387)
....++++|+.+++...+......- ......-+++.+++++ + ..+.+||..+ .+ ...+.......
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v-~~~~~spdg~~l~~~~-~--------~~i~~~d~~~~~~----~~~~~~~~~~~ 85 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELF-EAPNWSPDGKYLLLNS-E--------GLLYRLSLAGDPS----PEKVDTGFATI 85 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCC-EEEEECTTSSEEEEEE-T--------TEEEEEESSSCCS----CEECCCTTCCC
T ss_pred cceeEEEEeCCCCceeeeccCCcce-EeeEECCCCCEEEEEc-C--------CeEEEEeCCCCCC----ceEeccccccc
Confidence 3457899999998877654432211 1112223556555543 1 2789999998 77 66554332111
Q ss_pred ccccceEEEEECCEEEEEeee----CCeEEEEECCCCceeecccccccCCCCcEEEEe-CC-eEEEEeCCCC--eEEEEe
Q 016552 241 FSREAIDAVGWKGKLCLVNVK----GAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE-VLYGIDENSC--TLSRYD 312 (387)
Q Consensus 241 ~~~~~~~~~~~~g~lyv~gg~----~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~-~ly~~~~~~~--~l~~yd 312 (387)
.. ......-+|+..++... ...++.+|..++.-..+..... ...++.. ++ .|++.....+ .|+.+|
T Consensus 86 ~~--~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 86 CN--NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP----SYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp BC--SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS----EEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred cc--cceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC----ccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 10 01223336665544441 2578888887776554433111 1222332 34 4554544445 456666
Q ss_pred CCCCceeEccccccccCceEEEEeCCeEEE-EecCC--CeEEEEeccC
Q 016552 313 EVMDDWKEVVKSDLLKGARHAAAGGGRVCA-VCENG--GGIVVVDVKA 357 (387)
Q Consensus 313 ~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v-~gg~~--~~i~~~d~~~ 357 (387)
.++.....+...+... .......+|+.++ .+... ..++.++..+
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 160 IDSGVETRLTHGEGRN-DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG 206 (297)
T ss_dssp TTTCCEEECCCSSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCCCcceEcccCCCcc-ccceECCCCCEEEEEecCCCCccEEEECCCC
Confidence 7776665544322111 1222233565444 43323 4556666543
No 213
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.90 E-value=0.65 Score=43.91 Aligned_cols=186 Identities=9% Similarity=-0.013 Sum_probs=99.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.||+.--. ..+.++|+.++....+.+ ...+....+...++ .|||...... .....+..++...
T Consensus 149 ~g~Lyv~d~~--------~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~----~~~~~v~~~~~~g- 214 (430)
T 3tc9_A 149 HNHLYLVGEQ--------HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNN----NDRPNNYILTRES- 214 (430)
T ss_dssp EEEEEEEEBT--------EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSC----TTSEEEEEEEGGG-
T ss_pred CCeEEEEeCC--------CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCC----cccceEEEEeCCC-
Confidence 4678887431 578999999988877643 11222222222344 5999864322 1122455566543
Q ss_pred ccccCeE---EcCCCCCCCccccceEEEE-E-CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CC-e
Q 016552 225 EKNSRWE---KTGELKDGRFSREAIDAVG-W-KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE-V 297 (387)
Q Consensus 225 ~~~~~W~---~~~~~p~~~~~~~~~~~~~-~-~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~-~ 297 (387)
. |. .++.+..+ +..++ - +|.||+.......+.+||+.+..-..+.......+. ..+++. +| .
T Consensus 215 ~----~~~~~~l~~~~~p------~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P-~gia~~pdG~~ 283 (430)
T 3tc9_A 215 G----FKVITELTKGQNC------NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWE-FHIQFHPSGNY 283 (430)
T ss_dssp T----SCSEEEEEECSSC------CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCC-EEEEECTTSSE
T ss_pred c----eeeeeeeccCCCc------eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcc-eeEEEcCCCCE
Confidence 2 33 33322222 22222 2 688998876557899999987754333211111111 233432 34 4
Q ss_pred EEEEeCCCCeEEEEeCCC--Cce---eEccccc-------------cccCce-EEEEe---------CCeEEEEecCCCe
Q 016552 298 LYGIDENSCTLSRYDEVM--DDW---KEVVKSD-------------LLKGAR-HAAAG---------GGRVCAVCENGGG 349 (387)
Q Consensus 298 ly~~~~~~~~l~~yd~~~--~~W---~~v~~~~-------------~~~~~~-~~~~~---------~g~i~v~gg~~~~ 349 (387)
||+.+.....|+++|.+. +.. ..+...+ .+..+. .++.- +|.||+.-..+..
T Consensus 284 lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~ 363 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC 363 (430)
T ss_dssp EEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE
T ss_pred EEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE
Confidence 999988778898877653 222 1111110 111233 23332 3678888666788
Q ss_pred EEEEecc
Q 016552 350 IVVVDVK 356 (387)
Q Consensus 350 i~~~d~~ 356 (387)
|..+|..
T Consensus 364 I~~i~~~ 370 (430)
T 3tc9_A 364 IRILTPQ 370 (430)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 8888855
No 214
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.88 E-value=1.7 Score=43.67 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=37.6
Q ss_pred CeEEEEeCCCC--ceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCCCCCCceEEeCCCC
Q 016552 306 CTLSRYDEVMD--DWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVVDTPLG 371 (387)
Q Consensus 306 ~~l~~yd~~~~--~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~~~p~~ 371 (387)
+.|.++|++++ .|+.-...+.. .. .....|.++++|...+.+.++|..+. ...|....+.+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~--~g-~~~~~g~~v~~g~~dg~l~a~D~~tG--~~lw~~~~~~~ 519 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWN--GG-TLTTAGNVVFQGTADGRLVAYHAATG--EKLWEAPTGTG 519 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCC--CC-EEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSC
T ss_pred cEEEEEeCCCCcEEeecCCCCCCc--Cc-ceEeCCCEEEEECCCCcEEEEECCCC--ceeeeeeCCCC
Confidence 57999999886 47653322211 22 23344445555666788999998854 24688765543
No 215
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.85 E-value=0.91 Score=45.48 Aligned_cols=183 Identities=9% Similarity=0.039 Sum_probs=92.3
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEE--EeCCEEEEEecCCCCCCCCCcceEEEEECCCC-ccccCeEEcCCCCCCC
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAG--CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG-EKNSRWEKTGELKDGR 240 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~-~~~~~W~~~~~~p~~~ 240 (387)
..++++|..+++-..+............. .-+++..+++..+. ......+.++|..++ . ...+.......
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~---~~~~~~v~~~d~~~g~~----~~~~~~~~~~~ 307 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNR---AQNECKVNAYDAETGRF----VRTLFVETDKH 307 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECT---TSCEEEEEEEETTTCCE----EEEEEEEECSS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCC---CCCeeEEEEEECCCCce----eeEEEEccCCC
Confidence 46899999998876654322111222222 22555333333322 112347889999888 5 65543111110
Q ss_pred cc-ccceEEEEE--CCEEEEEeeeC--CeEEEEECCCCceeecccccccCCCCcE-EEE--eCCeEEEEeCCCC----eE
Q 016552 241 FS-REAIDAVGW--KGKLCLVNVKG--AEGAVYDVVANTWDDMREGMVRGWRGPV-AAM--DEEVLYGIDENSC----TL 308 (387)
Q Consensus 241 ~~-~~~~~~~~~--~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~~~~~~~-~~~--~~~~ly~~~~~~~----~l 308 (387)
.. ........- ||++++.+..+ ..++.+|........+... .+.... ++. .++.||+.+...+ .|
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG---EWEVTNFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS---SSCEEEEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred eECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC---CeEEEeeeEEcCCCCEEEEEecCCCCceEEE
Confidence 00 000112233 77765554433 5677778766666665431 111112 222 2446777765443 78
Q ss_pred EEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCC----CeEEEEeccCC
Q 016552 309 SRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG----GGIVVVDVKAA 358 (387)
Q Consensus 309 ~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~----~~i~~~d~~~~ 358 (387)
+.+|.++...+.+...... ......-+|+.+++...+ ..++++|..+.
T Consensus 385 ~~~d~~~~~~~~l~~~~~~--~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 385 YCIDIKGGKTKDLTPESGM--HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEEETTCCCCEESCCSSSE--EEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred EEEEcCCCCceeccCCCce--EEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 9999988776655421111 122233456655554321 45888887654
No 216
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.78 E-value=0.61 Score=47.08 Aligned_cols=119 Identities=14% Similarity=0.195 Sum_probs=73.0
Q ss_pred eEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc-----ccceEEEEECCEEEEEeeeCCe
Q 016552 190 AAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS-----REAIDAVGWKGKLCLVNVKGAE 264 (387)
Q Consensus 190 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~-----~~~~~~~~~~g~lyv~gg~~~~ 264 (387)
..++.+++||+.... ..+.++|..+++.. |+.-...+..... ......++.+++||+.... ..
T Consensus 65 ~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d-g~ 132 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF---------SVVYALDARDGRLI--WKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD-GR 132 (689)
T ss_dssp CCEEETTEEEEECGG---------GCEEEEETTTCCEE--EEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-SE
T ss_pred cCEEECCEEEEEcCC---------CeEEEEECCCCcee--EEEcCCCCccccccccccCCCCccEEECCEEEEEccC-CE
Confidence 345679999997531 35788999988866 8875433321100 0011235678999886543 48
Q ss_pred EEEEECCCC--ceeeccc-ccccCC-CCcEEEEeCCeEEEEeC-----CCCeEEEEeCCCCc--eeE
Q 016552 265 GAVYDVVAN--TWDDMRE-GMVRGW-RGPVAAMDEEVLYGIDE-----NSCTLSRYDEVMDD--WKE 320 (387)
Q Consensus 265 i~~yD~~~~--~W~~~~~-~~~~~~-~~~~~~~~~~~ly~~~~-----~~~~l~~yd~~~~~--W~~ 320 (387)
+.++|.+++ .|+.... ...... ...+.++.++.+|+-.. ..+.|++||.++++ |+.
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 999999887 4875432 111111 12233456888877432 14689999998875 875
No 217
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.77 E-value=1.1 Score=40.53 Aligned_cols=182 Identities=11% Similarity=0.033 Sum_probs=91.1
Q ss_pred ECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEe-CCEEEEEecCCCCCCCCCcceEEEE-ECC
Q 016552 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS-RGAVYVASGIGSQFSSDVAKSVEKW-DLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~y-d~~ 222 (387)
-++.+|+.+.. ..+++-+=.-.+|+.+.... +...+..+.. ++++|++|.. . .+..- |..
T Consensus 131 ~~~~~~~~~~~--------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~~-G--------~~~~S~d~g 192 (327)
T 2xbg_A 131 GNGSAEMITNV--------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSSR-G--------SFYSTWEPG 192 (327)
T ss_dssp ETTEEEEEETT--------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEETT-S--------SEEEEECTT
T ss_pred CCCCEEEEeCC--------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEECC-C--------cEEEEeCCC
Confidence 45777776641 12444333356899875322 2233333333 4566665522 1 11221 322
Q ss_pred CCccccCeEEcCCCCCCCccccceEEE-EECCEEEEEeeeCCeEEEEECC-CCceeecccc-cccCCCCcEEEEe-CCeE
Q 016552 223 NGEKNSRWEKTGELKDGRFSREAIDAV-GWKGKLCLVNVKGAEGAVYDVV-ANTWDDMREG-MVRGWRGPVAAMD-EEVL 298 (387)
Q Consensus 223 ~~~~~~~W~~~~~~p~~~~~~~~~~~~-~~~g~lyv~gg~~~~i~~yD~~-~~~W~~~~~~-~~~~~~~~~~~~~-~~~l 298 (387)
-.+ |..+........ ...+ .-++.+|+.+..+ .+...+.. -.+|+.+... ++.......++.. ++.+
T Consensus 193 G~t----W~~~~~~~~~~~----~~~~~~~~g~~~~~~~~G-~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (327)
T 2xbg_A 193 QTA----WEPHNRTTSRRL----HNMGFTPDGRLWMIVNGG-KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV 263 (327)
T ss_dssp CSS----CEEEECCSSSCE----EEEEECTTSCEEEEETTT-EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred CCc----eeECCCCCCCcc----ceeEECCCCCEEEEeCCc-eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence 455 998853221111 2222 2367888775433 44444333 5589987642 2222112233332 5688
Q ss_pred EEEeCCCCeEEEEeCCCCceeEcccccc-ccCceEEEE-eCCeEEEEecCCCeEEEEec
Q 016552 299 YGIDENSCTLSRYDEVMDDWKEVVKSDL-LKGARHAAA-GGGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 299 y~~~~~~~~l~~yd~~~~~W~~v~~~~~-~~~~~~~~~-~~g~i~v~gg~~~~i~~~d~ 355 (387)
|+.+. .+.++.-.-...+|+.+..... ....+.++. -+++++++ |....++.++.
T Consensus 264 ~~~g~-~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~-G~~G~i~~~~~ 320 (327)
T 2xbg_A 264 WLAGG-AGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFIL-GQKGILLRYVT 320 (327)
T ss_dssp EEEES-TTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEE-CSTTEEEEECC
T ss_pred EEEeC-CCeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEE-cCCceEEEEcC
Confidence 88875 4566655555789998874321 222233333 35666666 55556776664
No 218
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.76 E-value=0.47 Score=47.70 Aligned_cols=119 Identities=13% Similarity=0.186 Sum_probs=73.2
Q ss_pred eEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc-----ccceEEEEECCEEEEEeeeCCe
Q 016552 190 AAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS-----REAIDAVGWKGKLCLVNVKGAE 264 (387)
Q Consensus 190 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~-----~~~~~~~~~~g~lyv~gg~~~~ 264 (387)
..++.+++||+.... ..+.++|..+++.. |+.-...+..... ......++.+++||+.... ..
T Consensus 61 ~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-g~ 128 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW---------SRVIAVDAASGKEL--WRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD-GR 128 (668)
T ss_dssp CCEEETTEEEEEEGG---------GEEEEEETTTCCEE--EEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-SE
T ss_pred CCEEECCEEEEECCC---------CeEEEEECCCChhc--eEECCCCCccccccccccCCccceEEECCEEEEEcCC-CE
Confidence 345679999997542 36788999888866 8875543321000 0001235578999876533 48
Q ss_pred EEEEECCCC--ceeecccccccCC-CCcEEEEeCCeEEEEeCC-----CCeEEEEeCCCCc--eeE
Q 016552 265 GAVYDVVAN--TWDDMREGMVRGW-RGPVAAMDEEVLYGIDEN-----SCTLSRYDEVMDD--WKE 320 (387)
Q Consensus 265 i~~yD~~~~--~W~~~~~~~~~~~-~~~~~~~~~~~ly~~~~~-----~~~l~~yd~~~~~--W~~ 320 (387)
+.++|.+++ .|+.-........ ...+.++.++.+|+-... .+.|++||.++++ |+.
T Consensus 129 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 999999887 4875432111111 122334567888775332 3689999998764 865
No 219
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.68 E-value=0.73 Score=45.00 Aligned_cols=267 Identities=10% Similarity=-0.034 Sum_probs=128.0
Q ss_pred CCChHHHHHHHhhhcC-------chhhhhhhHhhhhhhcC------CCC--CceeeEEeecCCCCCCCCCCeEEEEEeCC
Q 016552 44 PGLPDHIAHLCLSHVH-------PSILHNVCHSWRRLIYS------PSF--PPFLSLYALFSPKSNSSSTPIHLFTFDPV 108 (387)
Q Consensus 44 ~~LPddl~~~iL~rLP-------l~~~r~VcK~W~~li~~------~~f--~~~~~l~~~~~~~~~~~~~~~~~~~~d~~ 108 (387)
..|.|+-+..+.+.|- -..+..+.+.|..+..- +.+ .+-..+|+... ....+.++|..
T Consensus 95 ~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~p~~~~~vs~~-------~d~~V~v~D~~ 167 (543)
T 1nir_A 95 GELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKKQLNDLDLPNLFSVTLR-------DAGQIALVDGD 167 (543)
T ss_dssp TSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCSSCCSCCCGGGEEEEEEG-------GGTEEEEEETT
T ss_pred cCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCcccccccCCCCEEEEEEc-------CCCeEEEEECC
Confidence 4577877777766654 23445566677655411 111 11113444332 12346677887
Q ss_pred CCCeecCCCCCCCCcccccccCCCccccccceEEEE-ECC-EEEEEecccCCCCCCCCccEEEec--cCCceeeCCCCCC
Q 016552 109 SSTWDPLPRPPPDPPLHLILHHPSFLSRNLPVQLVS-LSG-KLILLAATTHNFNPALTRPLIFDP--ICRTWTFGPELVT 184 (387)
Q Consensus 109 ~~~W~~l~~~p~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~v~GG~~~~~~~~~~~~~vyd~--~t~~W~~l~~~p~ 184 (387)
+++-... ++.. ...+.++. -++ .||+.+. + ..+.+||. .|.+-. ..++.
T Consensus 168 t~~~~~~--i~~g---------------~~~~~v~~spdg~~l~v~~~-d-------~~V~v~D~~~~t~~~~--~~i~~ 220 (543)
T 1nir_A 168 SKKIVKV--IDTG---------------YAVHISRMSASGRYLLVIGR-D-------ARIDMIDLWAKEPTKV--AEIKI 220 (543)
T ss_dssp TCCEEEE--EECS---------------TTEEEEEECTTSCEEEEEET-T-------SEEEEEETTSSSCEEE--EEEEC
T ss_pred CceEEEE--EecC---------------cccceEEECCCCCEEEEECC-C-------CeEEEEECcCCCCcEE--EEEec
Confidence 7644211 1110 00133322 244 4555432 1 56899999 665432 22222
Q ss_pred CCcceeEE-Ee----CC-EEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCC---C--Ccccc-ceEEEEE-
Q 016552 185 PRRWCAAG-CS----RG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKD---G--RFSRE-AIDAVGW- 251 (387)
Q Consensus 185 ~r~~~~~~-~~----~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~---~--~~~~~-~~~~~~~- 251 (387)
...-...+ .- ++ .+|+..-.+ ..+.++|..+.+ -...-+... . .+... ...++..
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~--------~~v~v~D~~t~~----~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWP--------PQFAIMDGETLE----PKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEES--------SEEEEEETTTCC----EEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccC--------CeEEEEeccccc----cceeecccCcccCccccccCCceEEEEEC
Confidence 22212222 22 45 566653222 367889988776 322211110 0 00000 0122222
Q ss_pred --CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCe-EEEEeCCCCeEEEEeCCCCceeEccc---c
Q 016552 252 --KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEV-LYGIDENSCTLSRYDEVMDDWKEVVK---S 324 (387)
Q Consensus 252 --~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~-ly~~~~~~~~l~~yd~~~~~W~~v~~---~ 324 (387)
++.+|+.......+.++|..+.+-..+.. ...+.....+++ -+|+ +|+....+++|.+||.++++-..... .
T Consensus 289 ~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~-i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ 367 (543)
T 1nir_A 289 HEHPEFIVNVKETGKVLLVNYKDIDNLTVTS-IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT 367 (543)
T ss_dssp SSSSEEEEEETTTTEEEEEECTTSSSCEEEE-EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred CCCCEEEEEECCCCeEEEEEecCCCcceeEE-eccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCC
Confidence 34455544444789999988753211111 111111122333 2444 66655557789999999886443222 1
Q ss_pred ccccCceEEEEe-CCeEEEEec-CCCeEEEEeccC
Q 016552 325 DLLKGARHAAAG-GGRVCAVCE-NGGGIVVVDVKA 357 (387)
Q Consensus 325 ~~~~~~~~~~~~-~g~i~v~gg-~~~~i~~~d~~~ 357 (387)
|..-.....+.- ++.+|+.+. +.+.|.++|..+
T Consensus 368 ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 368 PHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp BCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 222122222222 377888765 457899999986
No 220
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.63 E-value=0.3 Score=43.38 Aligned_cols=135 Identities=15% Similarity=0.034 Sum_probs=68.1
Q ss_pred eEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECC-EEEEEeeeCCeEEEEECCCCceee-ccccccc--CCCCcE
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKG-KLCLVNVKGAEGAVYDVVANTWDD-MREGMVR--GWRGPV 290 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g-~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~--~~~~~~ 290 (387)
.+.++|..+.+ -...-.++...... ...+..-+| .+|+.+.....+.++|+.+++-.. +....+. +.....
T Consensus 12 ~v~~~d~~~~~----~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (337)
T 1pby_B 12 KLVVIDTEKMA----VDKVITIADAGPTP-MVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFG 86 (337)
T ss_dssp EEEEEETTTTE----EEEEEECTTCTTCC-CCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTC
T ss_pred eEEEEECCCCc----EEEEEEcCCCCCCc-cceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccc
Confidence 78889998877 43322222210000 022233356 577776555789999998876432 2211100 001122
Q ss_pred EEEe--CCeEEEEeC-----------CCCeEEEEeCCCCceeEccccccccCceEEEEeCCe-EEEEecCCCeEEEEecc
Q 016552 291 AAMD--EEVLYGIDE-----------NSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGR-VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 291 ~~~~--~~~ly~~~~-----------~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~-i~v~gg~~~~i~~~d~~ 356 (387)
+++. ++.||+... ..+.|.+||.++.+........... ......-+|+ |++. +..+.++|+.
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~---~~~i~~~d~~ 162 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI-TMLAWARDGSKLYGL---GRDLHVMDPE 162 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC-CCEEECTTSSCEEEE---SSSEEEEETT
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc-ceeEECCCCCEEEEe---CCeEEEEECC
Confidence 3332 346777641 2478999999887654322221111 1222333555 4444 4568888876
Q ss_pred CC
Q 016552 357 AA 358 (387)
Q Consensus 357 ~~ 358 (387)
+.
T Consensus 163 ~~ 164 (337)
T 1pby_B 163 AG 164 (337)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 221
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.60 E-value=0.25 Score=46.47 Aligned_cols=147 Identities=6% Similarity=0.020 Sum_probs=77.4
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--CCE-EEEEeeeCCeEEEEECC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGK-LCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~-lyv~gg~~~~i~~yD~~ 271 (387)
++.+++.|+.+. .+.+||..+....-.-..+.... ....++.+ ++. +++.++.+..+.+||..
T Consensus 243 ~~~~l~s~~~dg--------~i~i~d~~~~~~~~~~~~~~~~~------~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~ 308 (430)
T 2xyi_A 243 HESLFGSVADDQ--------KLMIWDTRNNNTSKPSHTVDAHT------AEVNCLSFNPYSEFILATGSADKTVALWDLR 308 (430)
T ss_dssp CTTEEEEEETTS--------EEEEEETTCSCSSSCSEEEECCS------SCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEeCCC--------eEEEEECCCCCCCcceeEeecCC------CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCC
Confidence 456777776544 78899998762000011111111 11223333 343 77777777889999987
Q ss_pred CCc--eeecccccccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCce------------eEccccccccCceEEEE
Q 016552 272 ANT--WDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSRYDEVMDDW------------KEVVKSDLLKGARHAAA 335 (387)
Q Consensus 272 ~~~--W~~~~~~~~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W------------~~v~~~~~~~~~~~~~~ 335 (387)
+.. -..+.. ......+++.. +..+++.++.++.|.+||.....= ..+............+.
T Consensus 309 ~~~~~~~~~~~---h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 385 (430)
T 2xyi_A 309 NLKLKLHSFES---HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 385 (430)
T ss_dssp CTTSCSEEEEC---CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEE
T ss_pred CCCCCeEEeec---CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEE
Confidence 632 111111 01111223332 335777777788999999876211 01111111112222222
Q ss_pred --eCCe-EEEEecCCCeEEEEeccCC
Q 016552 336 --GGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 336 --~~g~-i~v~gg~~~~i~~~d~~~~ 358 (387)
-++. +++.++..+.|.+|++.+.
T Consensus 386 ~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 386 WNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp ECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ECCCCCCEEEEEECCCCEEEeEcccc
Confidence 3455 7777778888999999865
No 222
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.60 E-value=1.9 Score=42.28 Aligned_cols=94 Identities=7% Similarity=-0.048 Sum_probs=51.3
Q ss_pred CeEEEEECCCCceeecccccccCCCCcEEEE-eCC-eEEEEeCCCCeEEEEeCCCCceeE---c-cccccccCceEEEEe
Q 016552 263 AEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEE-VLYGIDENSCTLSRYDEVMDDWKE---V-VKSDLLKGARHAAAG 336 (387)
Q Consensus 263 ~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~-~ly~~~~~~~~l~~yd~~~~~W~~---v-~~~~~~~~~~~~~~~ 336 (387)
..+...|........+.. ...+..-+...+ .++ .+|+....+++|.++|.++++=.. + ...|.+......+.-
T Consensus 320 g~v~~vd~~~~~~~~v~~-i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p 398 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTE-ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHP 398 (567)
T ss_dssp TEEEEEETTCSSEEEEEE-EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEET
T ss_pred CeEEEEecCCCccceeee-eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECC
Confidence 678888887665433332 222222222222 233 455555557889999999885332 2 222332222223333
Q ss_pred -CCeEEEEec-CCCeEEEEeccC
Q 016552 337 -GGRVCAVCE-NGGGIVVVDVKA 357 (387)
Q Consensus 337 -~g~i~v~gg-~~~~i~~~d~~~ 357 (387)
++.+++.+. +.+.|.++|...
T Consensus 399 ~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 399 TFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCcEEEeCCCCCCeEEEecCCC
Confidence 367777764 347789998875
No 223
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.59 E-value=1.2 Score=44.05 Aligned_cols=187 Identities=10% Similarity=0.028 Sum_probs=97.2
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceee-CCC--C---CCCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF-GPE--L---VTPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~-l~~--~---p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~ 218 (387)
++.+++.|+.+ ..+.+||..+++-.. +.. + .......+.+ .-+++.++.|+.+. .+.+
T Consensus 201 dg~~las~s~D-------~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~--------~v~l 265 (611)
T 1nr0_A 201 DGSLFASTGGD-------GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK--------TIKI 265 (611)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS--------EEEE
T ss_pred CCCEEEEEECC-------CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC--------eEEE
Confidence 45566666643 257888887765433 211 0 1111111222 22567777777654 7899
Q ss_pred EECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCC--cEEEE-eC
Q 016552 219 WDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRG--PVAAM-DE 295 (387)
Q Consensus 219 yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~--~~~~~-~~ 295 (387)
||..+.+ ....-...... ......+..++...+.+..+..+..+|+.+..-...- .+... .+++. .+
T Consensus 266 Wd~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~----~gh~~~v~~l~~spd 335 (611)
T 1nr0_A 266 WNVATLK----VEKTIPVGTRI--EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVR----YGHNKAITALSSSAD 335 (611)
T ss_dssp EETTTTE----EEEEEECCSSG--GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEE----CCCSSCEEEEEECTT
T ss_pred EeCCCCc----eeeeecCCCCc--cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEE----cCCCCCEEEEEEeCC
Confidence 9998887 55432222111 1113344456666666666678889998876522211 11111 22333 25
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccC
Q 016552 296 EVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 296 ~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
++.++.++.++.|..||..+..-..+........-..+....+..++.++....+.++|..+
T Consensus 336 g~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~ 397 (611)
T 1nr0_A 336 GKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGG 397 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSS
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCC
Confidence 66666666788999999988765443211111111222222333344445556677776553
No 224
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.58 E-value=1.2 Score=41.46 Aligned_cols=129 Identities=14% Similarity=0.020 Sum_probs=71.3
Q ss_pred CCEEEEEeeeCCeEEEEECC---CCcee------ecccc--cccCCCCcEEEE-----eCCeEEEEeCCCCeEEEEeCCC
Q 016552 252 KGKLCLVNVKGAEGAVYDVV---ANTWD------DMREG--MVRGWRGPVAAM-----DEEVLYGIDENSCTLSRYDEVM 315 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~---~~~W~------~~~~~--~~~~~~~~~~~~-----~~~~ly~~~~~~~~l~~yd~~~ 315 (387)
++.+.+.++.+..+.+||.+ +++-. .+... .+.+......++ .++.+++.++.++.|..||.++
T Consensus 122 ~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 201 (437)
T 3gre_A 122 NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT 201 (437)
T ss_dssp TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 45666666666788888874 22211 11100 010011112221 2466777777789999999988
Q ss_pred CceeEccccccccCceEEEEe--CCeEEEEecCCCeEEEEeccCCCCCCceEE--eCCCCceeEEEEEccCCC
Q 016552 316 DDWKEVVKSDLLKGARHAAAG--GGRVCAVCENGGGIVVVDVKAAAAPTIFVV--DTPLGFEALSVHIMPRMS 384 (387)
Q Consensus 316 ~~W~~v~~~~~~~~~~~~~~~--~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~--~~p~~~~~~~~~~~~~~~ 384 (387)
.+-...-..+........+.. +++.++.|+..+.|.+||+.+. +-.. ..+......++...|..+
T Consensus 202 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~s 270 (437)
T 3gre_A 202 LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN----VLIRSWSFGDHAPITHVEVCQFYG 270 (437)
T ss_dssp CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT----EEEEEEBCTTCEEEEEEEECTTTC
T ss_pred CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc----cEEEEEecCCCCceEEEEeccccC
Confidence 654332222212333333333 6788888888888999999864 3332 224444566666655543
No 225
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.57 E-value=1.5 Score=41.52 Aligned_cols=186 Identities=13% Similarity=0.034 Sum_probs=100.7
Q ss_pred CEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCcc
Q 016552 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEK 226 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~ 226 (387)
+.||+.-.. ..+.++|+.+++...+.. ...+....+...+++|||..-... .....+..++....
T Consensus 153 g~Lyv~D~~--------~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~----~~~~gv~~~~~~~~-- 217 (433)
T 4hw6_A 153 DDLYWVGQR--------DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSS----DTNTGIYLFTRASG-- 217 (433)
T ss_dssp CEEEEECBT--------SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSC----TTSEEEEEECGGGT--
T ss_pred CEEEEEeCC--------CCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCC----cccceEEEEECCCC--
Confidence 788887431 578999999998877654 112222223333567999853221 11123445554322
Q ss_pred ccCeE---EcCCCCCCCccccceEEEEE-CCEEEEEeeeCCeEEEEECCCCce-eecccccccCCCCcEEEEe--CCeEE
Q 016552 227 NSRWE---KTGELKDGRFSREAIDAVGW-KGKLCLVNVKGAEGAVYDVVANTW-DDMREGMVRGWRGPVAAMD--EEVLY 299 (387)
Q Consensus 227 ~~~W~---~~~~~p~~~~~~~~~~~~~~-~g~lyv~gg~~~~i~~yD~~~~~W-~~~~~~~~~~~~~~~~~~~--~~~ly 299 (387)
+. .++.+..+. ..++-- +|.||+.......+.+||+.+++- ..+.......+. ..+++. ++.||
T Consensus 218 ---~~~~~~~~~~~~P~-----giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~-~~ia~dpdG~~LY 288 (433)
T 4hw6_A 218 ---FTERLSLCNARGAK-----TCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSN-FHIVWHPTGDWAY 288 (433)
T ss_dssp ---TCCEEEEEECSSBC-----CCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSC-EEEEECTTSSEEE
T ss_pred ---eeccccccccCCCC-----EEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCc-ccEEEeCCCCEEE
Confidence 32 222222111 122222 688998876556899999987654 222211111211 234443 44599
Q ss_pred EEeCCCCeEEEEeCC--CCcee---Ecccc---c----------cccCceEEEE----------eCCeEEEEecCCCeEE
Q 016552 300 GIDENSCTLSRYDEV--MDDWK---EVVKS---D----------LLKGARHAAA----------GGGRVCAVCENGGGIV 351 (387)
Q Consensus 300 ~~~~~~~~l~~yd~~--~~~W~---~v~~~---~----------~~~~~~~~~~----------~~g~i~v~gg~~~~i~ 351 (387)
+.+.....|+++|.+ +.... .+... . .+..+..++. -+|.|||.-..+..|.
T Consensus 289 vad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~ 368 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVR 368 (433)
T ss_dssp EEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEE
T ss_pred EEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEE
Confidence 998777889997754 33221 11110 0 1122343443 4578998877788898
Q ss_pred EEecc
Q 016552 352 VVDVK 356 (387)
Q Consensus 352 ~~d~~ 356 (387)
.+|+.
T Consensus 369 ~~~~~ 373 (433)
T 4hw6_A 369 VLTPE 373 (433)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 88875
No 226
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.79 Score=42.72 Aligned_cols=148 Identities=11% Similarity=0.021 Sum_probs=82.9
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++.+++.|+.+. .+.+||..+.+ -...-..+.. .....++.+ ++.+.+.++.+..+.+||+.+
T Consensus 181 ~~~~l~~~~~d~--------~i~iwd~~~~~----~~~~~~~~~h---~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNLS--------RVIIFDIRTLE----RLQIIENSPR---HGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETTS--------EEEEEETTTCC----EEEEEECCGG---GCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEeCCC--------eEEEEeCCCCe----eeEEEccCCC---CCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 467777776644 78999998877 3222111100 011233333 677777777777899999988
Q ss_pred CceeecccccccCCCCcEEEE-----eCCeEEEEeCCCCeEEEEeCCCCceeEccc-c----------cc----------
Q 016552 273 NTWDDMREGMVRGWRGPVAAM-----DEEVLYGIDENSCTLSRYDEVMDDWKEVVK-S----------DL---------- 326 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~-----~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~-~----------~~---------- 326 (387)
++....-. ........+++. .++.+++.++.++.|.+||.++..-...-. . |.
T Consensus 246 ~~~~~~~~-~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 246 NVLIRSWS-FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp TEEEEEEB-CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred ccEEEEEe-cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 65432110 000000112211 135566667677889999998764222111 0 00
Q ss_pred ---cc-CceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 327 ---LK-GARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 327 ---~~-~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.. .-.++...++++++.|+....|.+||+.+.
T Consensus 325 ~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 325 GIRSLNALSTISVSNDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp CCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCG
T ss_pred ccccCCceEEEEECCceEEEecCCCCeEEEEECCCc
Confidence 00 012233347888888888889999999855
No 227
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.52 E-value=0.18 Score=44.77 Aligned_cols=140 Identities=7% Similarity=-0.061 Sum_probs=74.3
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
++.||++.-.. ..+..||+.++. -.... .+.. . ...+..-+|++|+.. ...+..||+++++
T Consensus 24 ~~~l~~~d~~~--------~~i~~~d~~~~~----~~~~~-~~~~-~---~~i~~~~dG~l~v~~--~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 24 SNSLLFVDIPA--------KKVCRWDSFTKQ----VQRVT-MDAP-V---SSVALRQSGGYVATI--GTKFCALNWKEQS 84 (297)
T ss_dssp TTEEEEEETTT--------TEEEEEETTTCC----EEEEE-CSSC-E---EEEEEBTTSSEEEEE--TTEEEEEETTTTE
T ss_pred CCEEEEEECCC--------CEEEEEECCCCc----EEEEe-CCCc-e---EEEEECCCCCEEEEE--CCeEEEEECCCCc
Confidence 46788875432 378899999887 44332 2211 0 011222367877654 3579999999998
Q ss_pred eeeccccccc-CCCC-cEEE-EeCCeEEEEeC-----------CCCeEEEEeCCCCceeEccccccccCceEEE-EeCC-
Q 016552 275 WDDMREGMVR-GWRG-PVAA-MDEEVLYGIDE-----------NSCTLSRYDEVMDDWKEVVKSDLLKGARHAA-AGGG- 338 (387)
Q Consensus 275 W~~~~~~~~~-~~~~-~~~~-~~~~~ly~~~~-----------~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~g- 338 (387)
++.+...... .... ..++ -.+|++|+-.. ..+.|+.+|++.. ...+.. ....+..++ .-++
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~--~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFD--QVDISNGLDWSLDHK 161 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEE--EESBEEEEEECTTSC
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEee--ccccccceEEcCCCC
Confidence 8766532111 1111 1222 23678887541 2346888988643 222221 111122222 2244
Q ss_pred eEEEEecCCCeEEEEecc
Q 016552 339 RVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 339 ~i~v~gg~~~~i~~~d~~ 356 (387)
.+|+.......|++||++
T Consensus 162 ~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp EEEEEEGGGTEEEEEEEC
T ss_pred EEEEecCCCCcEEEEecc
Confidence 466665556677777753
No 228
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.48 E-value=0.78 Score=46.68 Aligned_cols=141 Identities=9% Similarity=-0.071 Sum_probs=76.9
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++.|++++|... -+..||+.+++ +.....-... ......++.. +|.|++-.. ..+..||+.+
T Consensus 482 ~g~lWi~~~t~~--------Gl~~~d~~~~~----~~~~~~~~~~--~~~~~~~i~~d~~g~lWigt~--~Gl~~~~~~~ 545 (758)
T 3ott_A 482 EGNVWVLLYNNK--------GIDKINPRTRE----VTKLFADELT--GEKSPNYLLCDEDGLLWVGFH--GGVMRINPKD 545 (758)
T ss_dssp TSCEEEEETTCS--------SEEEEETTTTE----EEEECTTTSC--GGGCEEEEEECTTSCEEEEET--TEEEEECC--
T ss_pred CCCEEEEccCCC--------CcEEEeCCCCc----eEEecCCCcC--CCcccceEEECCCCCEEEEec--CceEEEecCC
Confidence 578998766533 36789999998 8876421110 0011223333 577886542 3699999999
Q ss_pred Cceeeccc-ccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEE-eCCeEEEEecCCCeE
Q 016552 273 NTWDDMRE-GMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGI 350 (387)
Q Consensus 273 ~~W~~~~~-~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~g~i~v~gg~~~~i 350 (387)
+++..... .++.. ...+++..+|.|++-. ...|..||+++.+...... +.......+.. -+|.|++- + ..++
T Consensus 546 ~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~l~fG-~-~~Gl 619 (758)
T 3ott_A 546 ESQQSISFGSFSNN-EILSMTCVKNSIWVST--TNGLWIIDRKTMDARQQNM-TNKRFTSLLFDPKEDCVYLG-G-ADGF 619 (758)
T ss_dssp CCCCBCCCCC---C-CEEEEEEETTEEEEEE--SSCEEEEETTTCCEEEC---CCCCCSEEEEETTTTEEEEE-C-BSEE
T ss_pred CceEEecccCCCcc-ceEEEEECCCCEEEEC--CCCeEEEcCCCceeEEecC-CCCceeeeEEECCCCcEEEe-c-CCce
Confidence 88876531 12211 1233444578888865 3469999999987765432 22111222222 35666654 3 3457
Q ss_pred EEEeccC
Q 016552 351 VVVDVKA 357 (387)
Q Consensus 351 ~~~d~~~ 357 (387)
..+|++.
T Consensus 620 ~~f~p~~ 626 (758)
T 3ott_A 620 GISHSNL 626 (758)
T ss_dssp EEEEC--
T ss_pred EEEChhh
Confidence 7777763
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.48 E-value=0.69 Score=41.99 Aligned_cols=200 Identities=10% Similarity=0.058 Sum_probs=99.5
Q ss_pred eEEEEE-CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCC----CCCcc-eeEEEe--CCEEEEEecCCCCCCCC
Q 016552 140 VQLVSL-SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV----TPRRW-CAAGCS--RGAVYVASGIGSQFSSD 211 (387)
Q Consensus 140 ~~~~~~-~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p----~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~ 211 (387)
+.++.. ++.||++..... ......+++||+.|++-.+.-.++ .+... ...++. ++.+|+......
T Consensus 70 ~gv~~d~~g~L~v~D~g~~--~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~----- 142 (343)
T 2qe8_A 70 LGIKSDGNGIVWMLDNGNQ--SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD----- 142 (343)
T ss_dssp EEEEECSSSEEEEEECHHH--HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG-----
T ss_pred eEEEEcCCCcEEEEcCCCC--cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC-----
Confidence 344443 478999753210 001246899999988743311221 11112 223333 468999743100
Q ss_pred CcceEEEEECCCCccccCeEEcCC---C-CCC-Cccc------------------cceEEEEE--CC-EEEEEeeeCCeE
Q 016552 212 VAKSVEKWDLMNGEKNSRWEKTGE---L-KDG-RFSR------------------EAIDAVGW--KG-KLCLVNVKGAEG 265 (387)
Q Consensus 212 ~~~~v~~yd~~~~~~~~~W~~~~~---~-p~~-~~~~------------------~~~~~~~~--~g-~lyv~gg~~~~i 265 (387)
....+.+||+.+++ .|..+.. + +.+ .+.. .....+.+ +| .||+....+..+
T Consensus 143 ~~~~i~v~d~~~g~---~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l 219 (343)
T 2qe8_A 143 DKAALIRVDLQTGL---AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSM 219 (343)
T ss_dssp GGCEEEEEETTTCC---EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEE
T ss_pred CCCeEEEEECCCCC---EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeE
Confidence 12478899998765 1665532 1 100 0000 00112222 34 477665444567
Q ss_pred EEEECCCC---------ceeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEE
Q 016552 266 AVYDVVAN---------TWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA 335 (387)
Q Consensus 266 ~~yD~~~~---------~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~ 335 (387)
+.+|.... .+..+...-..+. ...+++ .+|.||+.....+.|.+||+++++...+...+....+..++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~-pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 220 YRIKSADLSNLQLTDAELGSKIERYSEKPI-CDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp EEEEHHHHTCTTCCHHHHHTTCEEEEECCS-CSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEE
T ss_pred EEEEHHHhcCCCCChhhhhcceEecccCCC-CceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEE
Confidence 77764210 0111110000111 123343 367899988777899999996666666655443333333333
Q ss_pred -eCCeEEEEecCCCeE
Q 016552 336 -GGGRVCAVCENGGGI 350 (387)
Q Consensus 336 -~~g~i~v~gg~~~~i 350 (387)
-+|++|+.....+.+
T Consensus 299 ~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 299 GSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CTTSCEEEEECCGGGS
T ss_pred CCCCcEEEEeCccccc
Confidence 468899886544333
No 230
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.46 E-value=1.5 Score=40.08 Aligned_cols=191 Identities=12% Similarity=-0.053 Sum_probs=99.9
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
+|++.++++.. ....+.++|+.+.+-......... ....+-.-++++++.++. +.+.+++..++.
T Consensus 144 Dg~~la~as~~-----~d~~i~iwd~~~~~~~~~~~~~~~-V~~v~fspdg~~l~s~s~---------~~~~~~~~~~~~ 208 (365)
T 4h5i_A 144 EGTVAAIASSK-----VPAIMRIIDPSDLTEKFEIETRGE-VKDLHFSTDGKVVAYITG---------SSLEVISTVTGS 208 (365)
T ss_dssp TSSCEEEEESC-----SSCEEEEEETTTTEEEEEEECSSC-CCEEEECTTSSEEEEECS---------SCEEEEETTTCC
T ss_pred CCCEEEEEECC-----CCCEEEEeECCCCcEEEEeCCCCc-eEEEEEccCCceEEeccc---------eeEEEEEeccCc
Confidence 55655544321 123578899988765543221111 111122235666666542 145677777766
Q ss_pred cccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeC----CeEEEEECCCCceeecccccccCCCC--cEEEE-eCCeE
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG----AEGAVYDVVANTWDDMREGMVRGWRG--PVAAM-DEEVL 298 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~----~~i~~yD~~~~~W~~~~~~~~~~~~~--~~~~~-~~~~l 298 (387)
-............ -......-+|+..+.+..+ ..+..+|...............+... .++++ .+|++
T Consensus 209 ----~~~~~~~~~~~~~-v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~ 283 (365)
T 4h5i_A 209 ----CIARKTDFDKNWS-LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL 283 (365)
T ss_dssp ----EEEEECCCCTTEE-EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE
T ss_pred ----ceeeeecCCCCCC-EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCc
Confidence 4332211111110 0022234477777665544 24566776665554332111111111 22333 36788
Q ss_pred EEEeCCCCeEEEEeCCCCceeEcccc-ccccCceEEE--EeCCeEEEEecCCCeEEEEeccCC
Q 016552 299 YGIDENSCTLSRYDEVMDDWKEVVKS-DLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 299 y~~~~~~~~l~~yd~~~~~W~~v~~~-~~~~~~~~~~--~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
++.++.++.|.+||.++.+ .+... .........+ .-+|+.++.|+....|-++|+..+
T Consensus 284 lasgs~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 284 AVLASNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred eEEEcCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 8888888999999998764 22221 2223333333 447888888888899999998643
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.37 E-value=1.4 Score=39.11 Aligned_cols=182 Identities=12% Similarity=0.179 Sum_probs=94.4
Q ss_pred ECCEEEEEecccCCCCCCCCccEEEecc-CCceeeCCCCCCCCcceeEEEe-CCEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 145 LSGKLILLAATTHNFNPALTRPLIFDPI-CRTWTFGPELVTPRRWCAAGCS-RGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd~~-t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
.++.||+... . ..++.||+. ...|+.-.+.+ . ..+.+.. ++.||+.. .+ ..+..||+.
T Consensus 106 ~~~~l~v~t~-~-------~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~vgt-~~--------~~l~~~d~~ 165 (330)
T 3hxj_A 106 FEDILYVTSM-D-------GHLYAINTDGTEKWRFKTKKA--I-YATPIVSEDGTIYVGS-ND--------NYLYAINPD 165 (330)
T ss_dssp ETTEEEEECT-T-------SEEEEECTTSCEEEEEECSSC--C-CSCCEECTTSCEEEEC-TT--------SEEEEECTT
T ss_pred ECCEEEEEec-C-------CEEEEEcCCCCEEEEEcCCCc--e-eeeeEEcCCCEEEEEc-CC--------CEEEEECCC
Confidence 4777777432 1 357889987 34566532211 1 1122333 67787742 11 267888887
Q ss_pred CCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCC-CceeecccccccCCCCcEEEEe-CCeEEE
Q 016552 223 NGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVA-NTWDDMREGMVRGWRGPVAAMD-EEVLYG 300 (387)
Q Consensus 223 ~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~-~~W~~~~~~~~~~~~~~~~~~~-~~~ly~ 300 (387)
++.. |..... ..... .....-+|.+|+.. ..+.+||... ..|+..... . ...+++.. +|.||+
T Consensus 166 -g~~~--~~~~~~--~~~~~---~~~~d~~g~l~v~t---~~l~~~d~~g~~~~~~~~~~---~-~~~~~~~~~~g~l~v 230 (330)
T 3hxj_A 166 -GTEK--WRFKTN--DAITS---AASIGKDGTIYFGS---DKVYAINPDGTEKWNFYAGY---W-TVTRPAISEDGTIYV 230 (330)
T ss_dssp -SCEE--EEEECS--SCCCS---CCEECTTCCEEEES---SSEEEECTTSCEEEEECCSS---C-CCSCCEECTTSCEEE
T ss_pred -CCEe--EEEecC--CCcee---eeEEcCCCEEEEEe---CEEEEECCCCcEEEEEccCC---c-ceeceEECCCCeEEE
Confidence 4422 665432 11111 11222478888776 4789999442 257654321 1 11223333 457877
Q ss_pred EeCCCCeEEEEeCCCCc-eeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCCCCCCceEEeC
Q 016552 301 IDENSCTLSRYDEVMDD-WKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVVDT 368 (387)
Q Consensus 301 ~~~~~~~l~~yd~~~~~-W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~~~ 368 (387)
.. ..+.+++||+.+.. |.. ....... ...+..-+|.|++. ..++.++.+|.... ..|....
T Consensus 231 ~t-~~~gl~~~~~~g~~~~~~-~~~~~~~-~~~~~~~~g~l~v~-t~~ggl~~~d~~g~---~~~~~~~ 292 (330)
T 3hxj_A 231 TS-LDGHLYAINPDGTEKWRF-KTGKRIE-SSPVIGNTDTIYFG-SYDGHLYAINPDGT---EKWNFET 292 (330)
T ss_dssp EE-TTTEEEEECTTSCEEEEE-ECSSCCC-SCCEECTTSCEEEE-CTTCEEEEECTTSC---EEEEEEC
T ss_pred Ec-CCCeEEEECCCCCEeEEe-eCCCCcc-ccceEcCCCeEEEe-cCCCCEEEECCCCc---EEEEEEc
Confidence 64 35789999876554 443 2211111 12222336777765 44557888886432 3566543
No 232
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.34 E-value=1 Score=44.23 Aligned_cols=188 Identities=12% Similarity=-0.022 Sum_probs=93.7
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEE-EeCC-EEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAG-CSRG-AVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~-~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+||... ....+.++|+.|++-.. .++....-+..+ .-++ .+||.+ .+ ..+.+||..+
T Consensus 166 ~~~~~V~~~-------~~~~V~viD~~t~~v~~--~i~~g~~p~~v~~SpDGr~lyv~~-~d--------g~V~viD~~~ 227 (567)
T 1qks_A 166 ENLFSVTLR-------DAGQIALIDGSTYEIKT--VLDTGYAVHISRLSASGRYLFVIG-RD--------GKVNMIDLWM 227 (567)
T ss_dssp GGEEEEEET-------TTTEEEEEETTTCCEEE--EEECSSCEEEEEECTTSCEEEEEE-TT--------SEEEEEETTS
T ss_pred CceEEEEeC-------CCCeEEEEECCCCeEEE--EEeCCCCccceEECCCCCEEEEEc-CC--------CeEEEEECCC
Confidence 345666643 22478999999886543 122222212222 2244 678764 21 3789999862
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE-----CC-EEEEEeeeCCeEEEEECCCCcee-eccc-ccc-cC-----C-CC
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW-----KG-KLCLVNVKGAEGAVYDVVANTWD-DMRE-GMV-RG-----W-RG 288 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~-----~g-~lyv~gg~~~~i~~yD~~~~~W~-~~~~-~~~-~~-----~-~~ 288 (387)
.+ -..+..++.+... ...++- || .+|+.+...+.+.++|..+.+=. .++. .++ .+ . +.
T Consensus 228 ~t----~~~v~~i~~G~~P---~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rv 300 (567)
T 1qks_A 228 KE----PTTVAEIKIGSEA---RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV 300 (567)
T ss_dssp SS----CCEEEEEECCSEE---EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCE
T ss_pred CC----CcEeEEEecCCCC---ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCce
Confidence 23 2223333322221 223333 56 57887777788999997765321 1221 011 00 0 11
Q ss_pred cEEE-EeCCeEEEE-eCCCCeEEEEeCCCCceeEccccccccCceE-EEEeCCeEEE-EecCCCeEEEEeccCC
Q 016552 289 PVAA-MDEEVLYGI-DENSCTLSRYDEVMDDWKEVVKSDLLKGARH-AAAGGGRVCA-VCENGGGIVVVDVKAA 358 (387)
Q Consensus 289 ~~~~-~~~~~ly~~-~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~-~~~~~g~i~v-~gg~~~~i~~~d~~~~ 358 (387)
..++ ..++..+++ -..+|.|+..|.+......+...+..+..+. ....+|+.++ .....+.|.++|..+.
T Consensus 301 a~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 301 AAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred EEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 1122 223333333 3457899999988766555444332222222 2233455443 3344677888887754
No 233
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.25 E-value=2.4 Score=42.17 Aligned_cols=173 Identities=10% Similarity=-0.008 Sum_probs=97.9
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
++.+.|+.+..-..+.+++.-+...+.+. .+++||+.--. ...+..+++.... .+.+.......
T Consensus 16 ~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~--------~~~I~r~~~~g~~----~~~v~~~g~~~-- 81 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS--------LKTISRAFMNGSA----LEHVVEFGLDY-- 81 (628)
T ss_dssp EEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCS----CEEEECSSCSC--
T ss_pred cEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC--------CCeEEEEECCCCC----cEEEEeCCCCC--
Confidence 34555665543333323332222222332 25799998432 2377888887665 55543222111
Q ss_pred ccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc-EEEEe--CCeEEEEe-CCCCeEEEEeCCCC
Q 016552 243 REAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD--EEVLYGID-ENSCTLSRYDEVMD 316 (387)
Q Consensus 243 ~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~--~~~ly~~~-~~~~~l~~yd~~~~ 316 (387)
+ ...++ .+++||+.......|+++|+....=+.+.. .....| .+++. +|.||+.+ +..++|++.+++..
T Consensus 82 P--~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~---~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 82 P--EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW---KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS 156 (628)
T ss_dssp C--CEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC---SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred c--ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe---CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC
Confidence 0 11222 468999987766789999987553222211 111222 44454 68999998 34678999999887
Q ss_pred ceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccCC
Q 016552 317 DWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 317 ~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.-+.+.. ....+.+++. .+++||+.=.....|..+|++..
T Consensus 157 ~~~~l~~--~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 157 ERTTLVP--NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp SCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEEC--CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 6555432 2233333333 25788888767778888888743
No 234
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.25 E-value=1.9 Score=42.85 Aligned_cols=183 Identities=10% Similarity=-0.085 Sum_probs=102.1
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCc-eeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRT-WTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~-W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
++.||+.-- ....++++++.... +..+..-... .-...++ .+++||+.-.. ...++++|..
T Consensus 51 ~~~ly~sD~-------~~~~I~r~~~~g~~~~~~v~~~~~~-~P~GlAvD~~~~~ly~~d~~--------~~~I~v~~~d 114 (619)
T 3s94_A 51 HGLIYWSDV-------SEEAIKRTEFNKTESVQNVVVSGLL-SPDGLACDWLGEKLYWTDSE--------TNRIEVSNLD 114 (619)
T ss_dssp TTEEEEEET-------TTTEEEEEEC-----CEEEECSSCS-CEEEEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEEC-------CCCeEEEEEccCCCceEEEEeCCCC-CcCeEEEEecCCEEEEEeCC--------CCEEEEEECC
Confidence 678888632 23467788876543 2322111111 1122333 36899998432 2478999987
Q ss_pred CCccccCeEEc--CCCCCCCccccceEEEE--ECCEEEEEee-eCCeEEEEECCCCceeecccccccCCCC-cEEEEe--
Q 016552 223 NGEKNSRWEKT--GELKDGRFSREAIDAVG--WKGKLCLVNV-KGAEGAVYDVVANTWDDMREGMVRGWRG-PVAAMD-- 294 (387)
Q Consensus 223 ~~~~~~~W~~~--~~~p~~~~~~~~~~~~~--~~g~lyv~gg-~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~~-- 294 (387)
... =..+ ..+..|+ ..++ .+|.||+..- ....++..++....-..+-. ..... .++++.
T Consensus 115 G~~----~~~l~~~~l~~P~------~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~---~~~~~P~Glald~~ 181 (619)
T 3s94_A 115 GSL----RKVLFWQELDQPR------AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN---SEIYWPNGLTLDYE 181 (619)
T ss_dssp SCS----CEEEECSSCSCCC------CEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SSCSSEEEEEEETT
T ss_pred CCC----EEEEEeCCCCCCc------eEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe---CCCCCCcEEEEEcc
Confidence 654 2223 2333232 1222 3689998863 23578888887543333321 01111 234444
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 295 EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+++||+.+...+.|+++|.+...=+.+.. .....++++...++.||+.-..+..|..+|..++
T Consensus 182 ~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 182 EQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp TTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSSEEEEECTTTCSEEEEESSSC
T ss_pred CCEEEEEeCCCCeEEEecCCCCccEEEEe-CCCCCceEEEEeCCEEEEecCCCCEEEEEECCCC
Confidence 68999999888899999998753222221 1234456777778899998667788999988754
No 235
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.55 Score=49.01 Aligned_cols=185 Identities=12% Similarity=0.044 Sum_probs=95.8
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++.+++.|+.+ ..+.+||..+..-... +.........+...+++.+.|+.+. .+.+||..+.+
T Consensus 28 dg~~lAsgs~D-------g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D~--------~v~lWd~~~~~ 90 (902)
T 2oaj_A 28 TQNLLAIATVT-------GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAKD--------TVYVLSLYSQK 90 (902)
T ss_dssp TTTEEEEEETT-------SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETTC--------EEEEEETTTCS
T ss_pred CCCEEEEEeCC-------CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECcC--------eEEEEECCCCc
Confidence 34555555532 2466677655433221 1111112222222355455555433 78899998876
Q ss_pred cccCeEEcCCCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccc-------ccccCC--CCcEEEEe
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMRE-------GMVRGW--RGPVAAMD 294 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~-------~~~~~~--~~~~~~~~ 294 (387)
-...-..+. ...++. -++...+.+..+..+.+||..+..-..... ....+. ...+++..
T Consensus 91 ----~~~~~~~~~------~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 91 ----VLTTVFVPG------KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp ----EEEEEECSS------CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred ----EEEEEcCCC------CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence 332111111 122222 256666666666789999998876421100 011111 12344444
Q ss_pred --CCeEEEEeCCCCeEEEEeCCCCceeEccccc-----c-----------ccCceEEE--EeCCeEEEEecCCCeEEEEe
Q 016552 295 --EEVLYGIDENSCTLSRYDEVMDDWKEVVKSD-----L-----------LKGARHAA--AGGGRVCAVCENGGGIVVVD 354 (387)
Q Consensus 295 --~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~-----~-----------~~~~~~~~--~~~g~i~v~gg~~~~i~~~d 354 (387)
++.+++.+..++.+ .||.+++.-...-... . .......+ ..+|+.++.|+....|.+||
T Consensus 161 p~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 161 PRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWD 239 (902)
T ss_dssp TTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred cCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 23566777778889 9999887543321110 0 01222223 33688888888888899999
Q ss_pred ccCC
Q 016552 355 VKAA 358 (387)
Q Consensus 355 ~~~~ 358 (387)
+.+.
T Consensus 240 ~~~g 243 (902)
T 2oaj_A 240 ANSG 243 (902)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 8754
No 236
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.24 E-value=1.1 Score=44.37 Aligned_cols=185 Identities=8% Similarity=-0.103 Sum_probs=94.4
Q ss_pred CccEEEeccC------CceeeCC-CCCCCCcceeEEEeCCE-EEEEecCCCCCCCCCcceEEEEECC-CCccccCeEEcC
Q 016552 164 TRPLIFDPIC------RTWTFGP-ELVTPRRWCAAGCSRGA-VYVASGIGSQFSSDVAKSVEKWDLM-NGEKNSRWEKTG 234 (387)
Q Consensus 164 ~~~~vyd~~t------~~W~~l~-~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~-~~~~~~~W~~~~ 234 (387)
..++++|..+ ++-+.+. .-.. ........-+|+ |+........ .......++++|.. ++... ....+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~-~~~~~~~i~~~d~~~~g~~~-~~~~l~ 237 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPR-MPWEGTELKTARVTEDGRFA-DTRTLL 237 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS-EECCCEECTTSSEEEEEEECTTC-CTTTCEEEEEEEECTTSCEE-EEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC-cccCceECCCCCEEEEEECCCCC-CCCCCcEEEEEEECCCCccc-ccEEeC
Confidence 4689999988 6766665 3221 111112223554 4444322110 01123478999998 56300 033333
Q ss_pred CCCCCCccccceEEE-EECCEEEEEeeeC--CeEEEEECCCCceeeccccccc----CCC--CcEEEEe-CCeEEEEeCC
Q 016552 235 ELKDGRFSREAIDAV-GWKGKLCLVNVKG--AEGAVYDVVANTWDDMREGMVR----GWR--GPVAAMD-EEVLYGIDEN 304 (387)
Q Consensus 235 ~~p~~~~~~~~~~~~-~~~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~----~~~--~~~~~~~-~~~ly~~~~~ 304 (387)
.-.... ....+ .-||++|+.+..+ ..++.+|+.++++..+...... .|. ...+++. ++++++....
T Consensus 238 ~~~~~~----~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 238 GGPEEA----IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EETTBC----EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred CCCCce----EcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 111010 01122 2378888776554 3789999988888876532111 111 1234443 6777777655
Q ss_pred CC--eEEEEeCCCCceeEccccccccCceEE-EEeCCeEEEEecCC---CeEEEEeccCC
Q 016552 305 SC--TLSRYDEVMDDWKEVVKSDLLKGARHA-AAGGGRVCAVCENG---GGIVVVDVKAA 358 (387)
Q Consensus 305 ~~--~l~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~g~i~v~gg~~---~~i~~~d~~~~ 358 (387)
+ .|+.+|.+++..+.+...... ...+ ..-++.++++.... ..++.+|..++
T Consensus 314 -~~~~l~~~d~~~~~~~~l~~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 314 -GAAVLGILDPESGELVDAAGPWTE--WAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp -SSCEEEEEETTTTEEEECCSSCCE--EEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred -CccEEEEEECCCCcEEEecCCCCe--EEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 5 467779888876665432111 1122 23456666665432 36777776544
No 237
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.18 E-value=1.7 Score=39.09 Aligned_cols=183 Identities=8% Similarity=0.031 Sum_probs=86.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCC-cceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPR-RWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++.+++.|+.+ ..+.+||..+++-.. .+.... ...+.+ .-+++.++.||.+. .+.+||...
T Consensus 87 ~~~~l~s~s~D-------~~v~lwd~~~~~~~~--~~~~h~~~v~~v~~sp~~~~l~s~~~d~--------~i~~wd~~~ 149 (343)
T 2xzm_R 87 ENCFAISSSWD-------KTLRLWDLRTGTTYK--RFVGHQSEVYSVAFSPDNRQILSAGAER--------EIKLWNILG 149 (343)
T ss_dssp STTEEEEEETT-------SEEEEEETTSSCEEE--EEECCCSCEEEEEECSSTTEEEEEETTS--------CEEEEESSS
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCcEEE--EEcCCCCcEEEEEECCCCCEEEEEcCCC--------EEEEEeccC
Confidence 34556666543 357889988775432 111111 111122 22566667776544 678888764
Q ss_pred CccccCeEEcCCCCCCCccccceEEEEE--C----------CEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEE
Q 016552 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--K----------GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVA 291 (387)
Q Consensus 224 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~----------g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~ 291 (387)
.. -.......... ....++.+ + +.+++.++.+..+.+||.....=..+.. ......++
T Consensus 150 ~~----~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---h~~~v~~~ 219 (343)
T 2xzm_R 150 EC----KFSSAEKENHS---DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKA---HESNVNHL 219 (343)
T ss_dssp CE----EEECCTTTSCS---SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEEC---CSSCEEEE
T ss_pred Cc----eeeeecccCCC---ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcC---ccccceEE
Confidence 43 22222111110 01112222 1 1455566666788889843321111111 00011223
Q ss_pred EE-eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceE--EEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 292 AM-DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 292 ~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+. .++++++.++.++.|..||.....-. ..... ...... ...-+++++. ++....+.+||+.+.
T Consensus 220 ~~s~~g~~l~sgs~dg~v~iwd~~~~~~~-~~~~~-~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 220 SISPNGKYIATGGKDKKLLIWDILNLTYP-QREFD-AGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQ 286 (343)
T ss_dssp EECTTSSEEEEEETTCEEEEEESSCCSSC-SEEEE-CSSCEEEEEECSSSCEEE-EEESSCEEEEESSSC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCccc-ceeec-CCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCC
Confidence 33 35677777777899999998433211 01110 111111 2223455544 455566889988754
No 238
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.04 E-value=1.7 Score=39.06 Aligned_cols=145 Identities=10% Similarity=-0.004 Sum_probs=81.9
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEE-ECCEEEEEeeeCCeEEEEECCCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~-~~g~lyv~gg~~~~i~~yD~~~~ 273 (387)
+++||++--. ...+..+++...... .+.....+..+. ..++- .++.||+.......++++|+...
T Consensus 46 ~~~lyw~D~~--------~~~I~r~~~~g~~~~-~~~~~~~l~~p~-----glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 46 HGLIYWSDVS--------EEAIKRTEFNKTESV-QNVVVSGLLSPD-----GLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp GTEEEEEETT--------TTEEEEEETTSSSCC-CEEEEECCSCCC-----EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCEEEEEECC--------CCcEEEEEccCCCce-EEEEcCCCCCcc-----EEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 5789987432 236788887655300 022222222111 12222 47899998766678999998765
Q ss_pred ceeecccccccCCCCc-EEEE--eCCeEEEEeC-CCCeEEEEeCCCCceeEccccccccCceEEEE--eCCeEEEEecCC
Q 016552 274 TWDDMREGMVRGWRGP-VAAM--DEEVLYGIDE-NSCTLSRYDEVMDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENG 347 (387)
Q Consensus 274 ~W~~~~~~~~~~~~~~-~~~~--~~~~ly~~~~-~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~ 347 (387)
.=+.+.. .....+ .+++ .+|.||+.+. ..+.|++++++...=+.+.. .....+..++. .+++||+.=...
T Consensus 112 ~~~~l~~---~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~~l~~Pnglavd~~~~~lY~aD~~~ 187 (318)
T 3sov_A 112 LRKVLFW---QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN-SEIYWPNGLTLDYEEQKLYWADAKL 187 (318)
T ss_dssp SCEEEEC---SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEETTT
T ss_pred cEEEEEe---CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE-CCCCCccEEEEeccCCEEEEEECCC
Confidence 3332211 111122 3444 3689999884 35789999998654333321 12222333333 367888886667
Q ss_pred CeEEEEeccC
Q 016552 348 GGIVVVDVKA 357 (387)
Q Consensus 348 ~~i~~~d~~~ 357 (387)
..|..+|.+.
T Consensus 188 ~~I~~~d~dG 197 (318)
T 3sov_A 188 NFIHKSNLDG 197 (318)
T ss_dssp TEEEEEETTS
T ss_pred CEEEEEcCCC
Confidence 7788888764
No 239
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.87 E-value=2.2 Score=38.69 Aligned_cols=186 Identities=13% Similarity=0.064 Sum_probs=96.9
Q ss_pred CccEEEeccCCceeeCCCCCC------CCcc-eeEEE----eCCEEEEEecCCCCC-----CCCCcceEEEEECC---CC
Q 016552 164 TRPLIFDPICRTWTFGPELVT------PRRW-CAAGC----SRGAVYVASGIGSQF-----SSDVAKSVEKWDLM---NG 224 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~------~r~~-~~~~~----~~~~iyv~GG~~~~~-----~~~~~~~v~~yd~~---~~ 224 (387)
..+.++|+.++.-.++ ..+. +... ..... -+++|+|+.-....+ +....+.+.+||+. ++
T Consensus 35 g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg 113 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS 113 (334)
T ss_dssp TEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC
T ss_pred CEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC
Confidence 4688899986654443 2221 2222 23333 246888863211111 11124678999988 66
Q ss_pred ccccCeEEc-CCCCCC-------CccccceEEEEE--CCEEEEEeeeC-CeEEEEECCCC---ceeecccccccCCC-Cc
Q 016552 225 EKNSRWEKT-GELKDG-------RFSREAIDAVGW--KGKLCLVNVKG-AEGAVYDVVAN---TWDDMREGMVRGWR-GP 289 (387)
Q Consensus 225 ~~~~~W~~~-~~~p~~-------~~~~~~~~~~~~--~g~lyv~gg~~-~~i~~yD~~~~---~W~~~~~~~~~~~~-~~ 289 (387)
+.. |..- +..... .+. .+.-+++ +|.+||.+..+ ..|+.+|+... .|-.-.. ...... -.
T Consensus 114 ~~~--~~~dL~~~~~~~~~~~g~~~~--~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~-~~~~~~G~n 188 (334)
T 2p9w_A 114 KPV--WSVNFEKVQDEFEKKAGKRPF--GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESG-NGGQRPGYS 188 (334)
T ss_dssp CCS--EEEESHHHHHHHHHHHSSCCE--EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCC-CSSSCCSCS
T ss_pred CEE--EEecCcccccccccccccccc--CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCC-CcccccCcc
Confidence 533 5532 111100 111 1223333 57899988888 89999999865 2532221 111122 23
Q ss_pred EEEEe-CC-eEEEEeCCCCeEEEEeCCCCceeEcccc-----ccccCceE--EEEeCCeEEEEecCCCeEEEEecc
Q 016552 290 VAAMD-EE-VLYGIDENSCTLSRYDEVMDDWKEVVKS-----DLLKGARH--AAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 290 ~~~~~-~~-~ly~~~~~~~~l~~yd~~~~~W~~v~~~-----~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~ 356 (387)
.+++. +| .|++.+. .+.|+++|..+....++... ......-. ..-.+|++++++.....+.++...
T Consensus 189 GIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 189 GITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSW 263 (334)
T ss_dssp EEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECS
T ss_pred eEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECC
Confidence 45555 44 5555555 88999999885433122211 11222222 234799998887655555555554
No 240
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.79 E-value=0.2 Score=44.89 Aligned_cols=105 Identities=13% Similarity=0.017 Sum_probs=61.3
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCceeEcccccc---
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE-VLYGIDENSCTLSRYDEVMDDWKEVVKSDL--- 326 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~-~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~--- 326 (387)
++++|+.++....+.++|+.+++....-. .+.......+++. ++ .+|+.+...+.|++||+++.+-......+.
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCV-MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEE-CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEe-cCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 67888888777899999999886532211 1110012233332 34 588887667899999999876543222211
Q ss_pred --ccCc-eEEEEeCCeEEEEecC------------CCeEEEEeccC
Q 016552 327 --LKGA-RHAAAGGGRVCAVCEN------------GGGIVVVDVKA 357 (387)
Q Consensus 327 --~~~~-~~~~~~~g~i~v~gg~------------~~~i~~~d~~~ 357 (387)
.... .....-+|+.++++.. ...+.++|+.+
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 1111 2233345654444442 37899999875
No 241
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.79 E-value=0.84 Score=42.46 Aligned_cols=104 Identities=9% Similarity=0.018 Sum_probs=58.2
Q ss_pred CCEEEEEeeeCCeEEEEECCCC--ceeecccc--cccCCC--CcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCce-----
Q 016552 252 KGKLCLVNVKGAEGAVYDVVAN--TWDDMREG--MVRGWR--GPVAAMD-EE-VLYGIDENSCTLSRYDEVMDDW----- 318 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~--~~~~~~--~~~~~~~-~~-~ly~~~~~~~~l~~yd~~~~~W----- 318 (387)
++++++.+ .+..+.+||+.+. .+..+... ...+.. ..+++.. ++ .+++.++.++.|..||..+..-
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 56666665 5678999999843 23322100 011111 2233333 33 6777777788999999988753
Q ss_pred eEccccccc---------cCceEEE--EeCCeEEEEecCCCeEEEEeccC
Q 016552 319 KEVVKSDLL---------KGARHAA--AGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 319 ~~v~~~~~~---------~~~~~~~--~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
..+...... ......+ ..+|++++.++. ..+.+||+.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp EEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred eEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 222211100 0122222 336778777777 8999999985
No 242
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.79 E-value=0.19 Score=50.91 Aligned_cols=170 Identities=11% Similarity=-0.004 Sum_probs=90.6
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCCCcceEEEEECCC----CccccCeEEcC--CC
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN----GEKNSRWEKTG--EL 236 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~----~~~~~~W~~~~--~~ 236 (387)
.+.++++.+.....+.+... ...+.+. .+++||++--. ...|.++++.. .. -..+. .+
T Consensus 387 ~I~~id~~~~~~~~~~~~~~--~p~gla~d~~~~~Ly~sD~~--------~~~I~~~~~~g~~~~~~----~~~~i~~~~ 452 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNLR--NVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSS----YDTVISRDI 452 (699)
T ss_dssp C-CEECTTSCCEECCSCCCT--TCCCCEEETTTTEEEECCTT--------TTSBEEEESCCCCC-CC----CCCBCCSCC
T ss_pred ceEEEeCCCCcceeeeccCc--ceEEEccccccCeEEEEecC--------CCeEEEEecCCCCCCcc----eEEEEeCCC
Confidence 45677777776665432211 1122222 36789986322 23677888765 11 11111 11
Q ss_pred CCCCccccceEEEE-ECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCC-cEEEE--eCCeEEEEeCCC-CeEEEE
Q 016552 237 KDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRG-PVAAM--DEEVLYGIDENS-CTLSRY 311 (387)
Q Consensus 237 p~~~~~~~~~~~~~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~~--~~~~ly~~~~~~-~~l~~y 311 (387)
..+ . ..++- .++.||+.......|.++|+....-..+.. ..... ..+++ .++.||+.+... +.|+++
T Consensus 453 ~~P----~-glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~---~~~~~P~giavDp~~g~ly~td~~~~~~I~~~ 524 (699)
T 1n7d_A 453 QAP----D-GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR---EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 524 (699)
T ss_dssp --C----C-CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECC---CSSCCCCCEECCSSSSCCEECCCSSSCCEEBC
T ss_pred CCc----c-eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEe---CCCCCcceEEEccCCCcEEEcccCCCCeEEEE
Confidence 111 1 11221 468899986655789999988664433321 11111 23444 367899887433 689999
Q ss_pred eCCCCceeEccccccccCceEEEE--eCCeEEEEecCCCeEEEEeccC
Q 016552 312 DEVMDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~~--~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
+++...-+.+... .+..+.+++. .+++||+.-.....|.++|++.
T Consensus 525 ~~dG~~~~~l~~~-~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 525 GLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CSSSCCCCEESCS-SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred eCCCCCeeEEEeC-CCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 8876544333221 1222332333 3578888876677888888864
No 243
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.70 E-value=0.83 Score=41.11 Aligned_cols=138 Identities=9% Similarity=-0.036 Sum_probs=76.3
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
++.+|+++... ..+..||+.+++ ..... .+.. . ...+..-+|++++.. ...+..||+.+++
T Consensus 60 ~~~l~~~d~~~--------~~i~~~d~~~~~----~~~~~-~~~~-v---~~i~~~~dg~l~v~~--~~gl~~~d~~~g~ 120 (326)
T 2ghs_A 60 SGTAWWFNILE--------RELHELHLASGR----KTVHA-LPFM-G---SALAKISDSKQLIAS--DDGLFLRDTATGV 120 (326)
T ss_dssp TTEEEEEEGGG--------TEEEEEETTTTE----EEEEE-CSSC-E---EEEEEEETTEEEEEE--TTEEEEEETTTCC
T ss_pred CCEEEEEECCC--------CEEEEEECCCCc----EEEEE-CCCc-c---eEEEEeCCCeEEEEE--CCCEEEEECCCCc
Confidence 36788875432 268899998876 55443 2211 1 122334578888765 2469999999988
Q ss_pred eeecccccccCCC---CcEEEE-eCCeEEEEeC------CCCeEEEEeCCCCceeEccccccccCceEEE-EeCC-eEEE
Q 016552 275 WDDMREGMVRGWR---GPVAAM-DEEVLYGIDE------NSCTLSRYDEVMDDWKEVVKSDLLKGARHAA-AGGG-RVCA 342 (387)
Q Consensus 275 W~~~~~~~~~~~~---~~~~~~-~~~~ly~~~~------~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~g-~i~v 342 (387)
.+.+... ..... ...+++ .+|++|+... ..+.|+.|| +++...+.. .......++ .-+| .+|+
T Consensus 121 ~~~~~~~-~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 121 LTLHAEL-ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp EEEEECS-STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEE
T ss_pred EEEEeeC-CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEE
Confidence 7765431 11111 112222 3567887542 135789998 455544321 111122222 2345 4677
Q ss_pred EecCCCeEEEEecc
Q 016552 343 VCENGGGIVVVDVK 356 (387)
Q Consensus 343 ~gg~~~~i~~~d~~ 356 (387)
.......|++||..
T Consensus 196 ~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 196 VDTKVNRLMRVPLD 209 (326)
T ss_dssp EETTTCEEEEEEBC
T ss_pred EECCCCEEEEEEcc
Confidence 65556788888875
No 244
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=94.66 E-value=2.6 Score=39.09 Aligned_cols=105 Identities=10% Similarity=0.147 Sum_probs=59.6
Q ss_pred CCEEEEEeeeCCeEEEEECCCC------ceeecc-----cc-cccCCCCcEEEEeCCeEEEEeCC---------CCeEEE
Q 016552 252 KGKLCLVNVKGAEGAVYDVVAN------TWDDMR-----EG-MVRGWRGPVAAMDEEVLYGIDEN---------SCTLSR 310 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~------~W~~~~-----~~-~~~~~~~~~~~~~~~~ly~~~~~---------~~~l~~ 310 (387)
+|+++++... ..+.++|..++ .|.... .. .+.++...++--.+++||+.... ..+|++
T Consensus 237 dG~~~~vs~~-g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVWPTYT-GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEEEBTT-SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEEEeCC-CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 6776655443 46888888655 354111 11 12222222222346799996421 246999
Q ss_pred EeCCCCceeEccccccccCceEEEEeCCe--EEEEecCCCeEEEEeccCC
Q 016552 311 YDEVMDDWKEVVKSDLLKGARHAAAGGGR--VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 311 yd~~~~~W~~v~~~~~~~~~~~~~~~~g~--i~v~gg~~~~i~~~d~~~~ 358 (387)
+|+++.+-..--.... ......+.-+++ +|+..+.++.+.++|..+.
T Consensus 316 iD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 316 LDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp EETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 9998875544222222 112334445665 6666677899999999976
No 245
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.59 E-value=0.59 Score=44.22 Aligned_cols=144 Identities=13% Similarity=0.067 Sum_probs=83.1
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCE-EEEEeeeC----CeEEEEE
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGK-LCLVNVKG----AEGAVYD 269 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~-lyv~gg~~----~~i~~yD 269 (387)
++.||++-- . ..+.++|+.++. ...+... .......++--+|. ||+..... ..+..++
T Consensus 149 ~g~Lyv~d~-------~--~~I~~id~~~~~----v~~~~~~----~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 149 HNHLYLVGE-------Q--HPTRLIDFEKEY----VSTVYSG----LSKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp EEEEEEEEB-------T--EEEEEEETTTTE----EEEEECC----CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCeEEEEeC-------C--CcEEEEECCCCE----EEEEecC----CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 478998732 1 578899999988 7766431 11111222223455 99887533 2455666
Q ss_pred CCCCceeecccccccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEE-EeCCe-EEEEec
Q 016552 270 VVANTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAA-AGGGR-VCAVCE 345 (387)
Q Consensus 270 ~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~g~-i~v~gg 345 (387)
.. +.|..... .........+++. +|.||+.+...+.|++||+++..-..+...+....+..++ .-+|+ ||+.-.
T Consensus 212 ~~-g~~~~~~~-l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 212 RE-SGFKVITE-LTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp GG-GTSCSEEE-EEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred CC-Cceeeeee-eccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 53 33431111 1111112234443 6789999877789999999887553443333222233333 33555 899877
Q ss_pred CCCeEEEEeccC
Q 016552 346 NGGGIVVVDVKA 357 (387)
Q Consensus 346 ~~~~i~~~d~~~ 357 (387)
.+..|..+|.+.
T Consensus 290 ~~~~I~~~~~d~ 301 (430)
T 3tc9_A 290 NQHYILRSDYDW 301 (430)
T ss_dssp TTTEEEEEEEET
T ss_pred CCCEEEEEeCCc
Confidence 788999988773
No 246
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.48 E-value=0.79 Score=40.69 Aligned_cols=102 Identities=7% Similarity=-0.050 Sum_probs=58.8
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccc---cCCCCcEEEEeCCeEEEEeC-----------------CCCeEEEE
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMV---RGWRGPVAAMDEEVLYGIDE-----------------NSCTLSRY 311 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~---~~~~~~~~~~~~~~ly~~~~-----------------~~~~l~~y 311 (387)
+|++|+.......+..||+. ++.+.+..... .......++-.+|.+|+.+. ..+.|+.|
T Consensus 96 dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 96 QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 68888775444679999986 66655532111 11112233334778998531 12469999
Q ss_pred eCCCCceeEccccccccCceE-EEEeCCe-EEEEecC-----CCeEEEEeccC
Q 016552 312 DEVMDDWKEVVKSDLLKGARH-AAAGGGR-VCAVCEN-----GGGIVVVDVKA 357 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~-~~~~~g~-i~v~gg~-----~~~i~~~d~~~ 357 (387)
|+++++.+.+. ....... +..-+++ ||+.... ...|++||+..
T Consensus 175 d~~~g~~~~~~---~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 175 PPDGSPLQRMA---DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp CSSSCCCEEEE---EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred cCCCCcEEEEe---cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 99888887764 1122222 2333454 6666443 26788888763
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.35 E-value=1.8 Score=38.30 Aligned_cols=166 Identities=10% Similarity=0.119 Sum_probs=82.5
Q ss_pred cEEEeccCC-ceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcccc
Q 016552 166 PLIFDPICR-TWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSRE 244 (387)
Q Consensus 166 ~~vyd~~t~-~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~ 244 (387)
++.||+..+ .|+.-. +.. .....+..++.||+... + ..+.+||+. ++.. |......+ ..
T Consensus 80 l~~~d~~g~~~~~~~~--~~~-~~~~~~~~~~~l~v~t~-~--------~~l~~~d~~-g~~~--~~~~~~~~--~~--- 139 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDT--KKA-IVSDFTIFEDILYVTSM-D--------GHLYAINTD-GTEK--WRFKTKKA--IY--- 139 (330)
T ss_dssp EEEECCCGGGGGGSCC--------CCEEEETTEEEEECT-T--------SEEEEECTT-SCEE--EEEECSSC--CC---
T ss_pred EEEECCCCcEEEEEEC--CCC-cccCceEECCEEEEEec-C--------CEEEEEcCC-CCEE--EEEcCCCc--ee---
Confidence 888997433 354321 111 11223334888887531 1 257888887 4322 77554222 11
Q ss_pred ceEEEEE-CCEEEEEeeeCCeEEEEECCCC-ceeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCC-ceeE
Q 016552 245 AIDAVGW-KGKLCLVNVKGAEGAVYDVVAN-TWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMD-DWKE 320 (387)
Q Consensus 245 ~~~~~~~-~g~lyv~gg~~~~i~~yD~~~~-~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~-~W~~ 320 (387)
...+.. +|.+|+.. ....+..||+... .|..... .. ...+.+. .++.||+-. +.+++||.... .|..
T Consensus 140 -~~~~~~~~g~l~vgt-~~~~l~~~d~~g~~~~~~~~~---~~-~~~~~~~d~~g~l~v~t---~~l~~~d~~g~~~~~~ 210 (330)
T 3hxj_A 140 -ATPIVSEDGTIYVGS-NDNYLYAINPDGTEKWRFKTN---DA-ITSAASIGKDGTIYFGS---DKVYAINPDGTEKWNF 210 (330)
T ss_dssp -SCCEECTTSCEEEEC-TTSEEEEECTTSCEEEEEECS---SC-CCSCCEECTTCCEEEES---SSEEEECTTSCEEEEE
T ss_pred -eeeEEcCCCEEEEEc-CCCEEEEECCCCCEeEEEecC---CC-ceeeeEEcCCCEEEEEe---CEEEEECCCCcEEEEE
Confidence 112223 67887743 3357999999822 3654321 11 1122333 467787764 78999995432 4654
Q ss_pred ccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCCCCCCceEE
Q 016552 321 VVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 321 v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~ 366 (387)
...... ....+..-+|.|++. ..+..++.+|.... ..|..
T Consensus 211 ~~~~~~--~~~~~~~~~g~l~v~-t~~~gl~~~~~~g~---~~~~~ 250 (330)
T 3hxj_A 211 YAGYWT--VTRPAISEDGTIYVT-SLDGHLYAINPDGT---EKWRF 250 (330)
T ss_dssp CCSSCC--CSCCEECTTSCEEEE-ETTTEEEEECTTSC---EEEEE
T ss_pred ccCCcc--eeceEECCCCeEEEE-cCCCeEEEECCCCC---EeEEe
Confidence 322111 111122224566665 33456777765433 35654
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.17 E-value=0.63 Score=41.72 Aligned_cols=137 Identities=15% Similarity=0.045 Sum_probs=73.6
Q ss_pred CccEEEeccCCceeeCCC-CCCCCcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCc
Q 016552 164 TRPLIFDPICRTWTFGPE-LVTPRRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~-~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~ 241 (387)
..+++||+.+++.+.+.. +..+. ..+..-++ .|||.-.. ...+.+||...... ...+....++.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p~--gia~~~dg~~lyv~d~~--------~~~I~~~~~~~~~~-~~~~~~~~~~g--- 230 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVPG--GAEVSADSSFVLVAEFL--------SHQIVKYWLEGPKK-GTAEVLVKIPN--- 230 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCCC--EEEECTTSSEEEEEEGG--------GTEEEEEESSSTTT-TCEEEEEECSS---
T ss_pred ceEEEEeCCCCEEEEeccCCccCc--ceEECCCCCEEEEEeCC--------CCeEEEEECCCCcC-CccceEEeCCC---
Confidence 468999998887654321 12221 11222234 58887432 23788898875320 00443332321
Q ss_pred cccceEEEEECCEEEEEeee----------CCeEEEEECCCCceeecccccccCC-CCcEEEEeCCeEEEEeCCCCeEEE
Q 016552 242 SREAIDAVGWKGKLCLVNVK----------GAEGAVYDVVANTWDDMREGMVRGW-RGPVAAMDEEVLYGIDENSCTLSR 310 (387)
Q Consensus 242 ~~~~~~~~~~~g~lyv~gg~----------~~~i~~yD~~~~~W~~~~~~~~~~~-~~~~~~~~~~~ly~~~~~~~~l~~ 310 (387)
+. ..++--+|.||+.... ...+.+||+....-..+...-.... ...+++..+++||+.+...+.|.+
T Consensus 231 -P~-gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~ 308 (322)
T 2fp8_A 231 -PG-NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGI 308 (322)
T ss_dssp -EE-EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEE
T ss_pred -CC-CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEE
Confidence 11 1122235789988654 2468999997554444432111101 123455678899998766778999
Q ss_pred EeCCCC
Q 016552 311 YDEVMD 316 (387)
Q Consensus 311 yd~~~~ 316 (387)
|+++.+
T Consensus 309 ~~~~~~ 314 (322)
T 2fp8_A 309 LVYDKK 314 (322)
T ss_dssp EEC---
T ss_pred Eecccc
Confidence 997644
No 249
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.12 E-value=1.7 Score=39.42 Aligned_cols=180 Identities=11% Similarity=-0.075 Sum_probs=92.4
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEE-Ee-CC-EEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCC
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAG-CS-RG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~-~~-~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~ 240 (387)
..++++|..+++.+.+... ........ .- ++ +|++... .. .......++++|..+.. +..+.. ..+.
T Consensus 168 ~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~-~~--~~~~~~~l~~~d~~~~~----~~~l~~-~~~~ 237 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHE-GP--HDLVDARMWLVNEDGSN----VRKIKE-HAEG 237 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEEC-SC--SSSCSCCCEEEETTSCC----CEESSC-CCTT
T ss_pred ceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEec-CC--CCCCCceEEEEECCCCc----eeEeec-cCCC
Confidence 4678899998887765432 12111122 22 34 4544432 11 11122468899998887 777654 1111
Q ss_pred ccccceEEEEECCE-EEEEeeeC--C--eEEEEECCCCceeecccccccCCCCcEEEEe-CCeEEEEeC-----------
Q 016552 241 FSREAIDAVGWKGK-LCLVNVKG--A--EGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEVLYGIDE----------- 303 (387)
Q Consensus 241 ~~~~~~~~~~~~g~-lyv~gg~~--~--~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~~ly~~~~----------- 303 (387)
.. .......-+|+ |++..... . .+.++|+.+++...+.. .+ +. . ..... +|+++++..
T Consensus 238 ~~-~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~-~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 238 ES-CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PC-S-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EE-EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SE-E-EEEECSSSSEEEEEECCC--------
T ss_pred cc-ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CC-C-CCccCCCCceEEEecCCcceeecccc
Confidence 10 00112222565 55554332 3 39999999887665543 11 11 1 22223 666666532
Q ss_pred -----CCCeEEEEeCCCCceeEccccccc----------cCceEEEEeCCe-EEEEecC--CCeEEEEeccCC
Q 016552 304 -----NSCTLSRYDEVMDDWKEVVKSDLL----------KGARHAAAGGGR-VCAVCEN--GGGIVVVDVKAA 358 (387)
Q Consensus 304 -----~~~~l~~yd~~~~~W~~v~~~~~~----------~~~~~~~~~~g~-i~v~gg~--~~~i~~~d~~~~ 358 (387)
....|+.||.+++....+...+.. .........+|+ |++.+.. ...++.+|+.+.
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp --CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred ccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 235799999998876665433220 011223344554 5544432 356788887765
No 250
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=94.10 E-value=0.73 Score=45.08 Aligned_cols=168 Identities=12% Similarity=-0.045 Sum_probs=86.0
Q ss_pred ccEEEec--cCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc
Q 016552 165 RPLIFDP--ICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 165 ~~~vyd~--~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
.++..+. .... ..+...+..+ ..+....++.++++.+... .+.+||..+++ -..+...+.
T Consensus 91 ~l~~~~~~~~g~~-~~l~~~~~~~-~~~~s~dg~~~~~~s~~~~--------~~~l~d~~~g~----~~~l~~~~~---- 152 (582)
T 3o4h_A 91 ALFKVNTSRPGEE-QRLEAVKPMR-ILSGVDTGEAVVFTGATED--------RVALYALDGGG----LRELARLPG---- 152 (582)
T ss_dssp EEEEEETTSTTCC-EECTTSCSBE-EEEEEECSSCEEEEEECSS--------CEEEEEEETTE----EEEEEEESS----
T ss_pred EEEEEeccCCCcc-ccccCCCCce-eeeeCCCCCeEEEEecCCC--------CceEEEccCCc----EEEeecCCC----
Confidence 4666776 3332 2443333222 2222223345555544322 23478998887 666653332
Q ss_pred ccceEEEEECCEEEEEeeeC----CeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEEEEeCCCC--eEEEEeCCC
Q 016552 243 REAIDAVGWKGKLCLVNVKG----AEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSC--TLSRYDEVM 315 (387)
Q Consensus 243 ~~~~~~~~~~g~lyv~gg~~----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~--~l~~yd~~~ 315 (387)
......-||+..+..... ..++.+|+++++++.+.... +. ....+. -+|+.++.....+ .|+.||.++
T Consensus 153 --~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~--~~-~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 153 --FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE--GS-FSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp --CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSS--CE-EEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred --ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCC--Cc-cccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 123344577655443322 56899999999887664311 10 122222 2454444444455 799999999
Q ss_pred CceeEccccccccCce-------EEEEeCCeEEEEecCCCeEEEEec
Q 016552 316 DDWKEVVKSDLLKGAR-------HAAAGGGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 316 ~~W~~v~~~~~~~~~~-------~~~~~~g~i~v~gg~~~~i~~~d~ 355 (387)
++...+.......... ....-+|++++.+..+..+.+|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 228 GSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 8877322211100001 113456677666655566666666
No 251
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.07 E-value=4.8 Score=40.74 Aligned_cols=166 Identities=10% Similarity=0.061 Sum_probs=89.7
Q ss_pred ccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcC----CCCCCC
Q 016552 165 RPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG----ELKDGR 240 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~----~~p~~~ 240 (387)
.+++||+.++++..... .......+....++.|++... .-+..||..+++ ..... .++..
T Consensus 83 Gl~~yd~~~~~f~~~~~-~~~~~i~~i~~~~g~lWigt~----------~Gl~~~~~~~~~----~~~~~~~~~~l~~~- 146 (758)
T 3ott_A 83 GILVYNYRADRYEQPET-DFPTDVRTMALQGDTLWLGAL----------NGLYTYQLQSRK----LTSFDTRRNGLPNN- 146 (758)
T ss_dssp EEEEEETTTTEECCCSC-CCCSCEEEEEEETTEEEEEET----------TEEEEEETTTCC----EEEECHHHHCCSCS-
T ss_pred CeEEEeCCCCEEECccc-CCCceEEEEEecCCcEEEEcC----------CcceeEeCCCCe----EEEeccCCCCcCCC-
Confidence 47899999998865211 111112223345778888521 146789998888 77652 12211
Q ss_pred ccccceEEEEE--CCEEEEEeeeCCeEEEEECCCCceeecccccccCCC---CcEEEEe--CCeEEEEeCCCCeEEEEeC
Q 016552 241 FSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWR---GPVAAMD--EEVLYGIDENSCTLSRYDE 313 (387)
Q Consensus 241 ~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~---~~~~~~~--~~~ly~~~~~~~~l~~yd~ 313 (387)
...+... +|.|++... ..+..||+.++++............ ..++... ++.|++-. .+.++.||+
T Consensus 147 ----~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt--~~Gl~~~~~ 218 (758)
T 3ott_A 147 ----TIYSIIRTKDNQIYVGTY--NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT--EGYLFQYFP 218 (758)
T ss_dssp ----CEEEEEECTTCCEEEEET--TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE--EEEEEEEET
T ss_pred ----eEEEEEEcCCCCEEEEeC--CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE--CCCCeEEcC
Confidence 1223333 578887542 3688999999887654321111111 1223333 23467643 346999999
Q ss_pred CCCceeEccccccccCceEEEE-eCCeEEEEecCCCeEEEEeccC
Q 016552 314 VMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 314 ~~~~W~~v~~~~~~~~~~~~~~-~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
+++++.....++... -..+.. -+|.|+|-.. .++..||..+
T Consensus 219 ~~~~~~~~~~l~~~~-i~~i~~d~~g~lWigT~--~Gl~~~~~~~ 260 (758)
T 3ott_A 219 STGQIKQTEAFHNNS-IKSLALDGNGDLLAGTD--NGLYVYHNDT 260 (758)
T ss_dssp TTTEEEEEEEEEEEE-EEEEEECTTCCEEEEET--TEEEEECCTT
T ss_pred CCCeEEeccCCCCCe-EEEEEEcCCCCEEEEeC--CceeEEecCC
Confidence 998887654332111 111222 2456666542 3566666654
No 252
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.01 E-value=3.4 Score=37.39 Aligned_cols=115 Identities=11% Similarity=0.072 Sum_probs=68.1
Q ss_pred CCEEEEEeeeCCe-EEEEECCCCcee-ecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCC---ceeEcccc-
Q 016552 252 KGKLCLVNVKGAE-GAVYDVVANTWD-DMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMD---DWKEVVKS- 324 (387)
Q Consensus 252 ~g~lyv~gg~~~~-i~~yD~~~~~W~-~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~---~W~~v~~~- 324 (387)
+|++.+.++.+.. +.++|..+++-. ++..+. ......+++. .++++++.++.++.+.+||.+.. .+..+...
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~-h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~ 284 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL-DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWI 284 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEEEEECTT-CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCccccccccee
Confidence 6777777777776 999999876432 111000 1111223333 25677777777889999998654 33332220
Q ss_pred -c---------------ccc---CceEEEEeCCeEEEEecCCCeEEEEeccCCCCCCceEEe
Q 016552 325 -D---------------LLK---GARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVVD 367 (387)
Q Consensus 325 -~---------------~~~---~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~~ 367 (387)
+ ... ....+..-+|+.+++|...+.+.+|++.....+..|.+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~~~~~~~ 346 (355)
T 3vu4_A 285 NMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEMERWLIQ 346 (355)
T ss_dssp ECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTTTEEEEE
T ss_pred eccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCCceEEEe
Confidence 0 000 122233456888888887888888888866556677763
No 253
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.99 E-value=2.9 Score=36.48 Aligned_cols=189 Identities=6% Similarity=-0.052 Sum_probs=89.8
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCc
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 225 (387)
++..++.|+.++ .+.+||..+++-...- ............++.+.+.|+.+. .+..++..+..
T Consensus 78 ~~~~l~sgs~Dg-------~v~iw~~~~~~~~~~~--~~h~~~~~~~~~~~~~l~s~~~~~--------~~~~~~~~~~~ 140 (318)
T 4ggc_A 78 EGNYLAVGTSSA-------EVQLWDVQQQKRLRNM--TSHSARVGSLSWNSYILSSGSRSG--------HIHHHDVRVAE 140 (318)
T ss_dssp TSSEEEEEETTS-------EEEEEETTTTEEEEEE--ECCSSCEEEEEEETTEEEEEETTS--------EEEEEETTSSS
T ss_pred CCCEEEEEECCC-------cEEEeecCCceeEEEe--cCccceEEEeecCCCEEEEEecCC--------ceEeeecCCCc
Confidence 456677776432 5788998887643321 111122223344555666655433 44555555544
Q ss_pred cccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc--EEEE--eCCeEEE-
Q 016552 226 KNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP--VAAM--DEEVLYG- 300 (387)
Q Consensus 226 ~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~--~~~~--~~~~ly~- 300 (387)
..... +... ...........++++.+.++.+..+.+||..+++-............++ ..+. .++.++.
T Consensus 141 ----~~~~~-~~~~-~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 214 (318)
T 4ggc_A 141 ----HHVAT-LSGH-SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 214 (318)
T ss_dssp ----CEEEE-EECC-SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEE
T ss_pred ----eeEEE-EcCc-cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEE
Confidence 22111 1000 0000122233356666666666789999998764221111011111111 1222 1333433
Q ss_pred EeC-CCCeEEEEeCCCCceeEccccccccCceEEEEe-CCeEEEEec-CCCeEEEEeccCC
Q 016552 301 IDE-NSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAG-GGRVCAVCE-NGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~~~-~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~-~g~i~v~gg-~~~~i~~~d~~~~ 358 (387)
..+ ..+.+..||.....-.......... ....... ++.+++.+| ....|.+||..+.
T Consensus 215 ~~~~~~~~i~lwd~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~ 274 (318)
T 4ggc_A 215 GGGTSDRHIRIWNVCSGACLSAVDAHSQV-CSILWSPHYKELISGHGFAQNQLVIWKYPTM 274 (318)
T ss_dssp EECTTTCEEEEEETTTCCEEEEEECSSCE-EEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred EecCCCCEEEEEecccccccccccceeee-eeeeecccccceEEEEEcCCCEEEEEECCCC
Confidence 333 3567999998877544332211111 1222333 344555444 3577999998854
No 254
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.85 E-value=2 Score=39.09 Aligned_cols=186 Identities=10% Similarity=-0.072 Sum_probs=90.5
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEe-CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
..++++|+.+++-+.+...+. ........- +++.+++..... .......++.+|..... ...+.........
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~--~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~ 240 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGP--HDLVDARMWLINEDGTN----MRKVKTHAEGESC 240 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSC--TTTSSCSEEEEETTSCC----CEESCCCCTTEEE
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecC--CCCCcceEEEEeCCCCc----eEEeeeCCCCccc
Confidence 568899999887666543221 112222222 444333322211 11123478889988777 6666532211000
Q ss_pred ccceEEEEECCE-EEEEeeeC--C--eEEEEECCCCceeecccccc-----cCCCCcEEEEeCCeEEEEe--------CC
Q 016552 243 REAIDAVGWKGK-LCLVNVKG--A--EGAVYDVVANTWDDMREGMV-----RGWRGPVAAMDEEVLYGID--------EN 304 (387)
Q Consensus 243 ~~~~~~~~~~g~-lyv~gg~~--~--~i~~yD~~~~~W~~~~~~~~-----~~~~~~~~~~~~~~ly~~~--------~~ 304 (387)
......-||+ |++..... . .+..+|+++++-+.+..... ....+....-.|..|++.. ..
T Consensus 241 --~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 241 --THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp --EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC
T ss_pred --ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC
Confidence 0112222665 54444332 2 39999999887655532111 0011222333344454432 22
Q ss_pred CCeEEEEeCCCCceeEcccccc-c---------cCceEEEEeCCe-EEEEecC--CCeEEEEeccCC
Q 016552 305 SCTLSRYDEVMDDWKEVVKSDL-L---------KGARHAAAGGGR-VCAVCEN--GGGIVVVDVKAA 358 (387)
Q Consensus 305 ~~~l~~yd~~~~~W~~v~~~~~-~---------~~~~~~~~~~g~-i~v~gg~--~~~i~~~d~~~~ 358 (387)
...|+.||.+++.-..+...+. . ........-+|+ |++.+.. ...++.+|+...
T Consensus 319 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 319 DPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPES 385 (388)
T ss_dssp CCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGG
T ss_pred CCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChh
Confidence 4579999999887666554322 0 112223445665 4444332 356788887754
No 255
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=93.82 E-value=0.018 Score=56.87 Aligned_cols=32 Identities=13% Similarity=0.286 Sum_probs=28.7
Q ss_pred CCCChHHHHHHHhhhc-C---chhhhhhhHhhhhhh
Q 016552 43 LPGLPDHIAHLCLSHV-H---PSILHNVCHSWRRLI 74 (387)
Q Consensus 43 ~~~LPddl~~~iL~rL-P---l~~~r~VcK~W~~li 74 (387)
...||||++.+||.+| | ..+++.|||+|+.+.
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 3579999999999999 6 789999999999884
No 256
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.79 E-value=2.8 Score=38.01 Aligned_cols=180 Identities=10% Similarity=-0.066 Sum_probs=89.4
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCcc
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~ 242 (387)
..++++|+.+.+-+.+...+........-.-++ .|+... .+ ..+.++|..+++ =..+...+.....
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~-~~--------~~l~~~d~~~g~----~~~~~~~~~~~~~ 126 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK-DG--------RNLMRVDLATLE----ENVVYQVPAEWVG 126 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE-TT--------TEEEEEETTTCC----EEEEEECCTTEEE
T ss_pred ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe-CC--------CeEEEEECCCCc----ceeeeechhhccc
Confidence 368999999998888765543332122223344 454443 21 267888988887 5544444432110
Q ss_pred ccceEEEEECCEEEEEe----------------------eeCCeEEEEECCCCceeecccccccCCCCcEEEE-eCCeEE
Q 016552 243 REAIDAVGWKGKLCLVN----------------------VKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLY 299 (387)
Q Consensus 243 ~~~~~~~~~~g~lyv~g----------------------g~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ly 299 (387)
.....+.-++++++.. .....+..+|+.+++-..+... ......+...- .+.+|.
T Consensus 127 -~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~sp~dg~~l~ 204 (388)
T 3pe7_A 127 -YGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-NQWLGHPIYRPYDDSTVA 204 (388)
T ss_dssp -EEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-SSCEEEEEEETTEEEEEE
T ss_pred -ccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-CccccccEECCCCCCEEE
Confidence 0000112244443311 0114688899988865544321 11101111112 233444
Q ss_pred EEeCC-----CCeEEEEeCCCCceeEccccccc-cCceEEEEeCCe-EEEEec--CCC--eEEEEeccCC
Q 016552 300 GIDEN-----SCTLSRYDEVMDDWKEVVKSDLL-KGARHAAAGGGR-VCAVCE--NGG--GIVVVDVKAA 358 (387)
Q Consensus 300 ~~~~~-----~~~l~~yd~~~~~W~~v~~~~~~-~~~~~~~~~~g~-i~v~gg--~~~--~i~~~d~~~~ 358 (387)
+.... ...|+.+|.++.....+...... ........-+|+ |+.++. +.. .++++|+.++
T Consensus 205 ~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 205 FCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp EEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred EEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 43321 23799999988776665542211 111222334565 544432 222 3899998865
No 257
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.78 E-value=2.6 Score=38.25 Aligned_cols=144 Identities=10% Similarity=-0.069 Sum_probs=75.7
Q ss_pred CccEEEeccCCceeeCCCCCCCCcce-eEE-EeCCE-EEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCC
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWC-AAG-CSRGA-VYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~-~~~-~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~ 240 (387)
..++++|..+..++.+.. ..+.... ..+ .-+++ |++.+.... .....+.++|..+++ ...+..++.
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~----~~~~~l~~~d~~~g~----~~~l~~~~~-- 284 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKG----QTDRVIYKANPETLE----NEEVMVMPP-- 284 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETT----TCCEEEEEECTTTCC----EEEEEECCS--
T ss_pred ceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCC----CccceEEEEECCCCC----eEEeeeCCC--
Confidence 578999998888887765 2111111 112 22454 544432211 112358999999888 766654431
Q ss_pred ccccceEEEEE-CCEEEEEeee----------------CCeEEEEECCCCceeeccccccc----------CCCCcEEEE
Q 016552 241 FSREAIDAVGW-KGKLCLVNVK----------------GAEGAVYDVVANTWDDMREGMVR----------GWRGPVAAM 293 (387)
Q Consensus 241 ~~~~~~~~~~~-~g~lyv~gg~----------------~~~i~~yD~~~~~W~~~~~~~~~----------~~~~~~~~~ 293 (387)
. .....- +|++++..+. ...++.+|+.+++...+...... ....+....
T Consensus 285 ~----~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~ 360 (396)
T 3c5m_A 285 C----SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTP 360 (396)
T ss_dssp E----EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECT
T ss_pred C----CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEcc
Confidence 1 122233 7876665431 15789999988876655431110 011122222
Q ss_pred eCCeEEEEeCCC--CeEEEEeCCCCceeEcc
Q 016552 294 DEEVLYGIDENS--CTLSRYDEVMDDWKEVV 322 (387)
Q Consensus 294 ~~~~ly~~~~~~--~~l~~yd~~~~~W~~v~ 322 (387)
.+..|++..... ..|+.+|..+..+..+.
T Consensus 361 dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 361 NDDGVLFTSDFEGVPAIYIADVPESYKHLEH 391 (396)
T ss_dssp TSSEEEEEECTTSSCEEEEEECCTTCC----
T ss_pred CCCeEEEEecCCCCceEEEEEEccccccccc
Confidence 344566655433 35888888887776543
No 258
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.65 E-value=5.1 Score=39.54 Aligned_cols=145 Identities=12% Similarity=0.005 Sum_probs=80.9
Q ss_pred CccEEEecc-CC---ceeeCCCCCCCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCC
Q 016552 164 TRPLIFDPI-CR---TWTFGPELVTPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKD 238 (387)
Q Consensus 164 ~~~~vyd~~-t~---~W~~l~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~ 238 (387)
..++++|.. ++ ..+.+..-.. ......+ .-+|++|+.+..+. ...++.+|..+++ +..+.....
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~-~~~~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~----~~~l~~~~~ 285 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPE-EAIAQAEWAPDGSLIVATDRTG------WWNLHRVDPATGA----ATQLCRREE 285 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETT-BCEEEEEECTTSCEEEEECTTS------SCEEEEECTTTCC----EEESSCCSS
T ss_pred cEEEEEEECCCCcccccEEeCCCCC-ceEcceEECCCCeEEEEECCCC------CeEEEEEECCCCc----eeecccccc
Confidence 468999998 56 4444432111 1111222 23677777665432 2378889988888 888765332
Q ss_pred CC----ccccceEEEEE-CCEEEEEeeeC-CeEEEEECCCCceeecccccccCCCCcEE-EEeCCeEEEEeCCC---CeE
Q 016552 239 GR----FSREAIDAVGW-KGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRGPVA-AMDEEVLYGIDENS---CTL 308 (387)
Q Consensus 239 ~~----~~~~~~~~~~~-~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~~~~-~~~~~~ly~~~~~~---~~l 308 (387)
.. +.......+.. ++++++....+ ..++.+|..++..+.+... .+ ....+ ...++.+++..... ..+
T Consensus 286 ~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~--~~-~~~~~~s~~~~~~~~~~~~~~~~~~i 362 (662)
T 3azo_A 286 EFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGP--WT-EWAATLTVSGTRAVGVAASPRTAYEV 362 (662)
T ss_dssp BSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSS--CC-EEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred cccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCC--CC-eEEEEEecCCCEEEEEEcCCCCCCEE
Confidence 21 11101122332 67777665433 4566779888877766532 11 11223 45566666665322 368
Q ss_pred EEEeCCCCceeEcc
Q 016552 309 SRYDEVMDDWKEVV 322 (387)
Q Consensus 309 ~~yd~~~~~W~~v~ 322 (387)
+.+|.++++.+.+.
T Consensus 363 ~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 363 VELDTVTGRARTIG 376 (662)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEECCCCceEEee
Confidence 99999888877764
No 259
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=93.51 E-value=4.2 Score=36.77 Aligned_cols=129 Identities=13% Similarity=0.107 Sum_probs=66.5
Q ss_pred eEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD 294 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~ 294 (387)
.+.+||..+++ -...-..+.. ..++..+....++.. +..+.+||..+.. +.+.. ... .....++.
T Consensus 82 ~v~iWd~~~~~----~~~~~~~~~~------v~~v~~~~~~~~~~~-~~~i~i~d~~~~~-~~~~~-~~~--~~~~~~~s 146 (355)
T 3vu4_A 82 VVHIWDDVKKQ----DVSRIKVDAP------VKDLFLSREFIVVSY-GDVISVFKFGNPW-KRITD-DIR--FGGVCEFS 146 (355)
T ss_dssp EEEEEETTTTE----EEEEEECSSC------EEEEEECSSEEEEEE-TTEEEEEESSTTC-CBSSC-CEE--EEEEEEEE
T ss_pred EEEEEECCCCc----EEEEEECCCc------eEEEEEcCCEEEEEE-cCEEEEEECCCCc-eeeEE-ecc--CCceEEEE
Confidence 88999998887 3322212211 223334433333322 3578999988761 11111 110 11122333
Q ss_pred CCeEEEE-eCCCCeEEEEeCCCCc-eeE-------------ccccccccCceEEE--EeCCeEEEEecCCCe-EEEEecc
Q 016552 295 EEVLYGI-DENSCTLSRYDEVMDD-WKE-------------VVKSDLLKGARHAA--AGGGRVCAVCENGGG-IVVVDVK 356 (387)
Q Consensus 295 ~~~ly~~-~~~~~~l~~yd~~~~~-W~~-------------v~~~~~~~~~~~~~--~~~g~i~v~gg~~~~-i~~~d~~ 356 (387)
.+.+.+. +..+|.+..||..+.. +.. +..+.........+ ..+|++++.|+.... +.+||+.
T Consensus 147 ~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 147 NGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp TTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred ccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 3444444 5567899999998753 111 11122222333333 346788888777776 9999998
Q ss_pred CC
Q 016552 357 AA 358 (387)
Q Consensus 357 ~~ 358 (387)
+.
T Consensus 227 ~~ 228 (355)
T 3vu4_A 227 DG 228 (355)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 260
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=93.42 E-value=0.019 Score=53.32 Aligned_cols=147 Identities=10% Similarity=-0.005 Sum_probs=63.9
Q ss_pred EEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEEC
Q 016552 191 AGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 191 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~ 270 (387)
.++.++.||+.+. + ..+.++|..+++.. |+.-. .+.. ...+..+|++|+.+..+..+.++|.
T Consensus 5 P~v~~~~v~~gs~-d--------g~v~a~d~~tG~~~--W~~~~---~~~~----s~p~~~~g~~~v~~s~dg~l~a~d~ 66 (369)
T 2hz6_A 5 VTLPETLLFVSTL-D--------GSLHAVSKRTGSIK--WTLKE---DPVL----QVPTHVEEPAFLPDPNDGSLYTLGS 66 (369)
T ss_dssp ---CTTEEEEEET-T--------SEEEEEETTTCCEE--EEEEC---CCSC----CCC-----CCEEECTTTCCEEEC--
T ss_pred CeeeCCEEEEEcC-C--------CEEEEEECCCCCEE--EEecC---CCce----ecceEcCCCEEEEeCCCCEEEEEEC
Confidence 3455677777542 1 26889999988865 87544 1111 2234457778887655568999998
Q ss_pred CCC--ceeecccccccC-CCCcEEEEeCCeEEEEeCCCCeEEEEeCCCC--ceeEccccccccCceEEEEeCCeEEEEec
Q 016552 271 VAN--TWDDMREGMVRG-WRGPVAAMDEEVLYGIDENSCTLSRYDEVMD--DWKEVVKSDLLKGARHAAAGGGRVCAVCE 345 (387)
Q Consensus 271 ~~~--~W~~~~~~~~~~-~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~--~W~~v~~~~~~~~~~~~~~~~g~i~v~gg 345 (387)
+++ .|+.-.. .+.. ...+.. ..++.||+ +..++.+++||.+++ .|+.-.... ..... .+..++++.
T Consensus 67 ~tG~~~w~~~~~-~~~~~~~sp~~-~~~~~v~~-g~~dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p-~~~~v~~~~ 137 (369)
T 2hz6_A 67 KNNEGLTKLPFT-IPELVQASPCR-SSDGILYM-GKKQDIWYVIDLLTGEKQQTLSSAFA-----DSLSP-STSLLYLGR 137 (369)
T ss_dssp ---CCSEECSCC-HHHHHTTCSCC------CCC-CEEEEEEEEECCC----------------------------EEEEE
T ss_pred CCCceeeeeecc-CccccccCceE-ecCCEEEE-EeCCCEEEEEECCCCcEEEEecCCCc-----ccccc-cCCEEEEEe
Confidence 765 4653221 1110 111111 14555554 333567999998865 364322110 01111 344444555
Q ss_pred CCCeEEEEeccCCCCCCceEE
Q 016552 346 NGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 346 ~~~~i~~~d~~~~~~~~~W~~ 366 (387)
.+..+..+|..++ ...|..
T Consensus 138 ~dg~v~a~d~~tG--~~~W~~ 156 (369)
T 2hz6_A 138 TEYTITMYDTKTR--ELRWNA 156 (369)
T ss_dssp EEEEEECCCSSSS--SCCCEE
T ss_pred cCCEEEEEECCCC--CEEEeE
Confidence 5667888898754 135874
No 261
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.33 E-value=4.3 Score=36.41 Aligned_cols=184 Identities=10% Similarity=0.027 Sum_probs=88.1
Q ss_pred cCCceeeCCCCCCCCcceeEEEe-CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCC-CCCCccccceEEE
Q 016552 172 ICRTWTFGPELVTPRRWCAAGCS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGEL-KDGRFSREAIDAV 249 (387)
Q Consensus 172 ~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~-p~~~~~~~~~~~~ 249 (387)
.-.+|+.+. .+......+.... ++.+|++|.. . .+...+-.-.+ |+.+... +.+.. ......
T Consensus 23 ~g~~W~~~~-~~~~~~~~~v~~~~~~~~~~~G~~-g--------~i~~s~DgG~t----W~~~~~~~~~~~~--~~~~i~ 86 (327)
T 2xbg_A 23 DYNPWEAIQ-LPTTATILDMSFIDRHHGWLVGVN-A--------TLMETRDGGQT----WEPRTLVLDHSDY--RFNSVS 86 (327)
T ss_dssp SSCCEEEEE-CSCSSCEEEEEESSSSCEEEEETT-T--------EEEEESSTTSS----CEECCCCCSCCCC--EEEEEE
T ss_pred CCCCceEee-cCCCCcEEEEEECCCCcEEEEcCC-C--------eEEEeCCCCCC----CeECCCCCCCCCc--cEEEEE
Confidence 346788765 2332223333333 4577886531 1 22222112235 9988632 11111 112233
Q ss_pred EECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCceeEcccccccc
Q 016552 250 GWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLK 328 (387)
Q Consensus 250 ~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~ 328 (387)
..++.+|+++..+ .++.-+=.-.+|+.+.......-....++ ..++.+|+.+. .+.++.-+-...+|+.+......
T Consensus 87 ~~~~~~~~~g~~g-~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~~~- 163 (327)
T 2xbg_A 87 FQGNEGWIVGEPP-IMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQEAIG- 163 (327)
T ss_dssp EETTEEEEEEETT-EEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECSCCC-
T ss_pred ecCCeEEEEECCC-eEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecCCCc-
Confidence 4467888875433 34433223468998864211111112233 35678888764 55677666667899998653221
Q ss_pred CceEEEE-eCCeEEEEecCCCeEEEEeccCCCCCCceEE-eCCCCceeEEEE
Q 016552 329 GARHAAA-GGGRVCAVCENGGGIVVVDVKAAAAPTIFVV-DTPLGFEALSVH 378 (387)
Q Consensus 329 ~~~~~~~-~~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~-~~p~~~~~~~~~ 378 (387)
..+.+.. -++.+++++.. ..++.-+-. .+..|+. ..+.......+.
T Consensus 164 ~~~~~~~~~~~~~~~~g~~-G~~~~S~d~---gG~tW~~~~~~~~~~~~~~~ 211 (327)
T 2xbg_A 164 VMRNLNRSPSGEYVAVSSR-GSFYSTWEP---GQTAWEPHNRTTSRRLHNMG 211 (327)
T ss_dssp CEEEEEECTTSCEEEEETT-SSEEEEECT---TCSSCEEEECCSSSCEEEEE
T ss_pred ceEEEEEcCCCcEEEEECC-CcEEEEeCC---CCCceeECCCCCCCccceeE
Confidence 1222222 35667766543 344444322 1236874 333333333333
No 262
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=92.95 E-value=11 Score=39.84 Aligned_cols=133 Identities=11% Similarity=-0.037 Sum_probs=70.5
Q ss_pred eEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEE-EEECCCCceeecccccccCCCCcEEEE
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGA-VYDVVANTWDDMREGMVRGWRGPVAAM 293 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~-~yD~~~~~W~~~~~~~~~~~~~~~~~~ 293 (387)
.+.++|..+.. -..+...+..... ..... +|+..+.......++ +||..+++-..+.. . ......++.
T Consensus 318 ~i~~~~~~~~~----~~~~~~~~~~~~~---~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~-~--~~~~~~~~~ 386 (1045)
T 1k32_A 318 QAFIQDVSGTY----VLKVPEPLRIRYV---RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEE-N--LGNVFAMGV 386 (1045)
T ss_dssp EEEEECTTSSB----EEECSCCSCEEEE---EECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCC-C--CCSEEEEEE
T ss_pred EEEEEcCCCCc----eEEccCCCcceEE---eeeEc-CCCeEEEEECCCceEEEEECCCCCceEecC-C--ccceeeeEE
Confidence 56777777766 5554322210110 11122 555333333345678 89998876555431 1 111122333
Q ss_pred -eCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecC-C---------CeEEEEeccCC
Q 016552 294 -DEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCEN-G---------GGIVVVDVKAA 358 (387)
Q Consensus 294 -~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~-~---------~~i~~~d~~~~ 358 (387)
-+|+.++++...+.+++||.++++-..+..............-+|+.+++++. + ..++++|+.+.
T Consensus 387 SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 387 DRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred CCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 25555555556678999999988766554221111122234456775555432 1 47899998864
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.87 E-value=2 Score=42.34 Aligned_cols=119 Identities=16% Similarity=0.178 Sum_probs=69.7
Q ss_pred eEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCc-cc--cceEEEEECCEEEEEeeeCCeEE
Q 016552 190 AAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF-SR--EAIDAVGWKGKLCLVNVKGAEGA 266 (387)
Q Consensus 190 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~-~~--~~~~~~~~~g~lyv~gg~~~~i~ 266 (387)
..++.+++||+.... ..+.++|..+++.. |+.-...+.... .. .....++.+++||+... +..+.
T Consensus 63 ~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~--W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-dg~l~ 130 (582)
T 1flg_A 63 QAIVSDGVIYVTASY---------SRLFALDAKTGKRL--WTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-DASVV 130 (582)
T ss_dssp CCEEETTEEEEEETT---------TEEEEEESSSCCEE--EEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-TTEEE
T ss_pred ccEEECCEEEEEcCC---------CCEEEEECCCCcEE--EEEcCCCCcccccccccCCCccEEECCEEEEEeC-CCEEE
Confidence 446789999997542 13788999988866 887554332110 00 00123467899987643 34899
Q ss_pred EEECCCC--ceeecccccccCCC-CcEEEEeCC------eEEEEeC-----CCCeEEEEeCCCC--ceeE
Q 016552 267 VYDVVAN--TWDDMREGMVRGWR-GPVAAMDEE------VLYGIDE-----NSCTLSRYDEVMD--DWKE 320 (387)
Q Consensus 267 ~yD~~~~--~W~~~~~~~~~~~~-~~~~~~~~~------~ly~~~~-----~~~~l~~yd~~~~--~W~~ 320 (387)
++|.+++ .|+.-......... ..+.++.++ .||+-.. ..+.|++||.+++ .|+.
T Consensus 131 AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 131 ALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 9999888 48754321111111 112233344 5655321 2568999999876 4864
No 264
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.78 E-value=6.6 Score=38.10 Aligned_cols=107 Identities=13% Similarity=0.092 Sum_probs=59.9
Q ss_pred EEEECC-EEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCC---CCeEEEEeCCCCceeEccc
Q 016552 248 AVGWKG-KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDEN---SCTLSRYDEVMDDWKEVVK 323 (387)
Q Consensus 248 ~~~~~g-~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~---~~~l~~yd~~~~~W~~v~~ 323 (387)
+...+| .++++.+....+.+||+++++-..+... +. ......-.|..|+..... ...|+.+|.++++++.+..
T Consensus 116 ~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~-~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATEDRVALYALDGGGLRELARL-PG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE-SS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC
T ss_pred eeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC-CC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec
Confidence 455566 3555555444566899988876655431 11 122222334444433221 1569999999998877643
Q ss_pred cccccCceEEEEeCCeEEEEecCCC--eEEEEeccCC
Q 016552 324 SDLLKGARHAAAGGGRVCAVCENGG--GIVVVDVKAA 358 (387)
Q Consensus 324 ~~~~~~~~~~~~~~g~i~v~gg~~~--~i~~~d~~~~ 358 (387)
.+... ......-+|+.++.+.... .|+++|..++
T Consensus 193 ~~~~~-~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 193 GEGSF-SSASISPGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp SSCEE-EEEEECTTSCEEEEEECSSCEEEEEECTTTC
T ss_pred CCCcc-ccceECCCCCEEEEccCCCeeEEEEEcCCCC
Confidence 32211 2223345677655544444 7889998764
No 265
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.66 E-value=8.8 Score=38.16 Aligned_cols=139 Identities=12% Similarity=0.058 Sum_probs=69.7
Q ss_pred cceEEEEECCCCccccCeEEcCCCCCCCccccceEEE--EECCE-EEEEeeeC----CeEEEEECCCC-ceeeccccccc
Q 016552 213 AKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAV--GWKGK-LCLVNVKG----AEGAVYDVVAN-TWDDMREGMVR 284 (387)
Q Consensus 213 ~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~--~~~g~-lyv~gg~~----~~i~~yD~~~~-~W~~~~~~~~~ 284 (387)
...+.++|..+++ -..+....... .....+ .-||+ |++..... ..+..+|+.++ ....+......
T Consensus 234 ~~~l~~~d~~~~~----~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 306 (706)
T 2z3z_A 234 HVTVGIYHLATGK----TVYLQTGEPKE---KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK 306 (706)
T ss_dssp EEEEEEEETTTTE----EEECCCCSCTT---CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS
T ss_pred eeEEEEEECCCCc----eEeeccCCCCc---eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC
Confidence 3578899998887 55544211110 011122 23666 54433221 37889999988 66655421111
Q ss_pred CCC--CcEEEE-e--CCeEEEEeCCCC--eEEEEeCCCCceeEccccccccCceEEEEeCC-eEEEEecCC----CeEEE
Q 016552 285 GWR--GPVAAM-D--EEVLYGIDENSC--TLSRYDEVMDDWKEVVKSDLLKGARHAAAGGG-RVCAVCENG----GGIVV 352 (387)
Q Consensus 285 ~~~--~~~~~~-~--~~~ly~~~~~~~--~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g-~i~v~gg~~----~~i~~ 352 (387)
.+. ...++. . +|++++.+..++ .|+.+|.++.....+..............-+| .|++.+..+ ..++.
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYC 386 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEE
T ss_pred CeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEE
Confidence 111 112232 3 667665554444 57777876666665543211111111223344 466655443 36788
Q ss_pred EeccCC
Q 016552 353 VDVKAA 358 (387)
Q Consensus 353 ~d~~~~ 358 (387)
+|..+.
T Consensus 387 ~d~~~~ 392 (706)
T 2z3z_A 387 IDIKGG 392 (706)
T ss_dssp EETTCC
T ss_pred EEcCCC
Confidence 887654
No 266
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=92.48 E-value=4.5 Score=37.37 Aligned_cols=111 Identities=11% Similarity=0.027 Sum_probs=58.8
Q ss_pred EEEEEecCCCCCCCCCcceEEEEECCCCccccCe-----EEcCCCCCCCcc------ccceEEEE--ECCEEEEEeeeCC
Q 016552 197 AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRW-----EKTGELKDGRFS------REAIDAVG--WKGKLCLVNVKGA 263 (387)
Q Consensus 197 ~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W-----~~~~~~p~~~~~------~~~~~~~~--~~g~lyv~gg~~~ 263 (387)
++++.|+.+. .+.+||..+.. - ..+.....+... .....++. -+|++.+.++. .
T Consensus 240 ~~l~s~~~dg--------~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~ 306 (447)
T 3dw8_B 240 NTFVYSSSKG--------TIRLCDMRASA----LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L 306 (447)
T ss_dssp TEEEEEETTS--------CEEEEETTTCS----SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S
T ss_pred cEEEEEeCCC--------eEEEEECcCCc----cccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C
Confidence 6777777644 78899988876 3 111111000000 00122222 25676666666 7
Q ss_pred eEEEEECCC-Cce-eecccccccCCC-------------CcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEc
Q 016552 264 EGAVYDVVA-NTW-DDMREGMVRGWR-------------GPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEV 321 (387)
Q Consensus 264 ~i~~yD~~~-~~W-~~~~~~~~~~~~-------------~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v 321 (387)
.+.+||..+ ++- ..+.. ...... ...++. .++..++.++.++.|.+||.++..-..+
T Consensus 307 ~v~iwd~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 307 SVKVWDLNMENRPVETYQV-HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITL 379 (447)
T ss_dssp EEEEEETTCCSSCSCCEES-CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEE
T ss_pred eEEEEeCCCCccccceeec-cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceee
Confidence 999999976 331 11111 000000 001333 3556667777789999999988765543
No 267
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=91.83 E-value=7.3 Score=35.38 Aligned_cols=106 Identities=14% Similarity=0.119 Sum_probs=52.4
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEEe-CCEEEEEecCCCC-CCCCCcceEEEEECCCCccccCeEEcCCCCCCCc
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGCS-RGAVYVASGIGSQ-FSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~-~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~ 241 (387)
..+++||+.+++-.. .++.....+.+..- +..+|+..-.... ..+...+.+.+||..+.+. -..++ ++..++
T Consensus 31 ~~v~v~D~~t~~~~~--~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~---~~~i~-~~~~~~ 104 (361)
T 2oiz_A 31 SRVHVYDYTNGKFLG--MVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF---EKEIS-LPPKRV 104 (361)
T ss_dssp CEEEEEETTTCCEEE--EEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE---EEEEE-ECTTBC
T ss_pred CeEEEEECCCCeEEE--EecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE---EEEEE-cCcccc
Confidence 468899988876543 22222211112222 3478987532110 0011234789999987651 22332 111111
Q ss_pred ---cccceEEEEECC-EEEEEeee-CCeEEEEECCCCce
Q 016552 242 ---SREAIDAVGWKG-KLCLVNVK-GAEGAVYDVVANTW 275 (387)
Q Consensus 242 ---~~~~~~~~~~~g-~lyv~gg~-~~~i~~yD~~~~~W 275 (387)
......++.-+| .+|+.+.. .+.+.+||..+++=
T Consensus 105 ~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 105 QGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY 143 (361)
T ss_dssp CBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE
T ss_pred ccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE
Confidence 000122223355 57776654 46899999988743
No 268
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=91.82 E-value=2.6 Score=40.56 Aligned_cols=149 Identities=15% Similarity=0.097 Sum_probs=84.8
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE---------CCE-EEEEeeeC--
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW---------KGK-LCLVNVKG-- 262 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~---------~g~-lyv~gg~~-- 262 (387)
+++|||+-.. ...+.+.|+.++. -..+.......+.+ .....+ +|. ||+.....
T Consensus 151 ~~~Lyv~~~~--------~~~i~~ID~~~~~----v~~l~~~~~~~~~~--p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 151 KDHLYICYDG--------HKAIQLIDLKNRM----LSSPLNINTIPTNR--IRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp EEEEEEEEET--------EEEEEEEETTTTE----EEEEECCTTSSCSB--EEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred CCEEEEEECC--------CCeEEEEECCCCE----EEEEEccCccccCC--CcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 4679998542 1368889999998 77766543322221 223333 554 88886543
Q ss_pred ----CeEEEEECCC-Cceeecc--cccccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCC-------CC-ceeEcc---
Q 016552 263 ----AEGAVYDVVA-NTWDDMR--EGMVRGWRGPVAAMD--EEVLYGIDENSCTLSRYDEV-------MD-DWKEVV--- 322 (387)
Q Consensus 263 ----~~i~~yD~~~-~~W~~~~--~~~~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~~-------~~-~W~~v~--- 322 (387)
..+..++... +.|.... ...........+++. ++.||+.....+.|++||++ +. .|....
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred cccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 2477887655 4664200 001111112344443 57899998888899999997 44 353321
Q ss_pred --------ccccccCceEEE-EeCCe-EEEEecCCCeEEEEeccC
Q 016552 323 --------KSDLLKGARHAA-AGGGR-VCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 323 --------~~~~~~~~~~~~-~~~g~-i~v~gg~~~~i~~~d~~~ 357 (387)
..+.....+.++ .-+|. |||.=..+..|..+|.+.
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 112112223333 34555 788766778898877653
No 269
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=91.82 E-value=11 Score=37.53 Aligned_cols=144 Identities=8% Similarity=-0.068 Sum_probs=74.3
Q ss_pred CccEEEeccCCcee--eCCCCCCC-CcceeE-EEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCC
Q 016552 164 TRPLIFDPICRTWT--FGPELVTP-RRWCAA-GCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 164 ~~~~vyd~~t~~W~--~l~~~p~~-r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~ 239 (387)
..+++++..|..-. .+...+.. ...... ..-+|+..++..... .....++++|..+.. |..+..-...
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~----~~~~~l~~~~~~~~~----~~~l~~~~~~ 273 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG----WSENDVYWKRPGEKD----FRLLVKGVGA 273 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET----TTEEEEEEECTTCSS----CEEEEECSSC
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC----CCceEEEEEcCCCCc----eEEeecCCCc
Confidence 45888888877532 22222211 112222 223454433332211 022366777776667 8877632221
Q ss_pred CccccceEEEEECCEEEEEeeeC---CeEEEEECCCCc---eeecccccccCCCCcEEEEeCCeEEEEeCCCC--eEEEE
Q 016552 240 RFSREAIDAVGWKGKLCLVNVKG---AEGAVYDVVANT---WDDMREGMVRGWRGPVAAMDEEVLYGIDENSC--TLSRY 311 (387)
Q Consensus 240 ~~~~~~~~~~~~~g~lyv~gg~~---~~i~~yD~~~~~---W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~--~l~~y 311 (387)
. ...+..+|.+|+....+ ..+..+|+.+.. |+.+-...+ ......++..+++|++....++ .|+.+
T Consensus 274 ~-----~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~l~~~~~~~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 274 K-----YEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS-SASLLSVSIVGGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp C-----EEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS-SCEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred e-----EEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC-CCeEEEEEEECCEEEEEEEECCEEEEEEE
Confidence 1 22333577766665422 679999987764 877643211 1112234455888887765444 57788
Q ss_pred eCCCCceeEc
Q 016552 312 DEVMDDWKEV 321 (387)
Q Consensus 312 d~~~~~W~~v 321 (387)
|.++..-..+
T Consensus 348 ~~~g~~~~~l 357 (695)
T 2bkl_A 348 TLKGKPVRTV 357 (695)
T ss_dssp ETTCCEEEEC
T ss_pred eCCCCeeEEe
Confidence 8765533333
No 270
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.80 E-value=11 Score=37.54 Aligned_cols=92 Identities=10% Similarity=-0.057 Sum_probs=47.7
Q ss_pred eEEEEECCC-CceeecccccccCC--CCcEEEEeCCeEEEEeC----CCCeEEEEeCCCCceeEccccccc----cCceE
Q 016552 264 EGAVYDVVA-NTWDDMREGMVRGW--RGPVAAMDEEVLYGIDE----NSCTLSRYDEVMDDWKEVVKSDLL----KGARH 332 (387)
Q Consensus 264 ~i~~yD~~~-~~W~~~~~~~~~~~--~~~~~~~~~~~ly~~~~----~~~~l~~yd~~~~~W~~v~~~~~~----~~~~~ 332 (387)
.+.++|+.+ ++-..+........ ...+- -.+..|++... ....|+.||.++.+...+...... .....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 678888887 66444332100110 11222 33445555432 134699999999877665432211 11222
Q ss_pred EEEeCCeEEEEecCC--CeEEEEecc
Q 016552 333 AAAGGGRVCAVCENG--GGIVVVDVK 356 (387)
Q Consensus 333 ~~~~~g~i~v~gg~~--~~i~~~d~~ 356 (387)
...-+|++++.+... ..++.+|..
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~ 368 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSK 368 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSS
T ss_pred EECCCCeEEEEecCCCccEEEEEcCC
Confidence 345577766665543 366777754
No 271
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=91.40 E-value=7.7 Score=34.81 Aligned_cols=204 Identities=12% Similarity=0.027 Sum_probs=99.3
Q ss_pred EEEEE-CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCC-CC---Ccce-eEEEe-CCEEEEEecCCCCCCCCCc
Q 016552 141 QLVSL-SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV-TP---RRWC-AAGCS-RGAVYVASGIGSQFSSDVA 213 (387)
Q Consensus 141 ~~~~~-~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p-~~---r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~ 213 (387)
.++.. +|++|+....... .. ..++.++ +.+-...|... .. .... ..+.. +++|||+.-... ....
T Consensus 21 ~va~~~~g~~~v~~~~~~~--~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~---~~~~ 92 (343)
T 2qe8_A 21 NITLTPDGRLFLSLHQFYQ--PE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ---SKSV 92 (343)
T ss_dssp EEEECTTSCEEEEECGGGC--CS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH---HTSC
T ss_pred eEEECCCCCEEEEeCCCCC--Cc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC---cCCC
Confidence 34443 6788887432111 11 4677777 55444333211 11 1122 22222 479999852110 0012
Q ss_pred ceEEEEECCCCccccCeEEcCCCCCCCcc--ccceEEEEE--CCEEEEEee---eCCeEEEEECCCC-ceeeccc--cc-
Q 016552 214 KSVEKWDLMNGEKNSRWEKTGELKDGRFS--REAIDAVGW--KGKLCLVNV---KGAEGAVYDVVAN-TWDDMRE--GM- 282 (387)
Q Consensus 214 ~~v~~yd~~~~~~~~~W~~~~~~p~~~~~--~~~~~~~~~--~g~lyv~gg---~~~~i~~yD~~~~-~W~~~~~--~~- 282 (387)
..+.+||+.+++ -...-.++..... ......++- ++.+|+... ....+.+||+.++ .|+.+.. .+
T Consensus 93 ~~i~~~d~~tg~----~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 93 PKLVAWDTLNNQ----LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp CEEEEEETTTTE----EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred CeEEEEECCCCe----EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 478999999887 4432223211000 000223332 478998865 4468999999866 4665532 00
Q ss_pred c-------cC--------------CC--CcEEEEe--CCeEEEEeCCCCeEEEEeCCC--C-------ceeEcccccccc
Q 016552 283 V-------RG--------------WR--GPVAAMD--EEVLYGIDENSCTLSRYDEVM--D-------DWKEVVKSDLLK 328 (387)
Q Consensus 283 ~-------~~--------------~~--~~~~~~~--~~~ly~~~~~~~~l~~yd~~~--~-------~W~~v~~~~~~~ 328 (387)
+ .+ +. ...+++. ++.||+.......++.+|... + .+..+.......
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 248 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKP 248 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECC
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCC
Confidence 0 00 10 1123332 336887766556788887531 0 011111000000
Q ss_pred Cc-eEEEEeCCeEEEEecCCCeEEEEecc
Q 016552 329 GA-RHAAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 329 ~~-~~~~~~~g~i~v~gg~~~~i~~~d~~ 356 (387)
.+ ..++--+|.||+....++.|.+||+.
T Consensus 249 ~pdgia~d~~G~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 249 ICDGISIDKDHNIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp SCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred CCceEEECCCCCEEEEccCCCeEEEEECC
Confidence 11 22233468888887777888999883
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.35 E-value=3.8 Score=38.60 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=78.9
Q ss_pred CEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeC----CeEEEEECC
Q 016552 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG----AEGAVYDVV 271 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~----~~i~~yD~~ 271 (387)
+.||+.-. . ..+.++|+.+++ ...+... .......++--+|.||+..... ..+..++..
T Consensus 153 g~Lyv~D~-------~--~~I~~id~~~g~----v~~~~~~----~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 153 DDLYWVGQ-------R--DAFRHVDFVNQY----VDIKTTN----IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CEEEEECB-------T--SCEEEEETTTTE----EEEECCC----CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred CEEEEEeC-------C--CCEEEEECCCCE----EEEeecC----CCCccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 78999721 1 578999998888 7666531 1111122333467799886422 235556543
Q ss_pred CCceeecccccccCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCce-eEccccccccCceEEE-EeCC-eEEEEecC
Q 016552 272 ANTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSRYDEVMDDW-KEVVKSDLLKGARHAA-AGGG-RVCAVCEN 346 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~W-~~v~~~~~~~~~~~~~-~~~g-~i~v~gg~ 346 (387)
..+..... .........+++. ++.||+.+...+.|++||+++..- ..+...........++ .-+| .||+.-..
T Consensus 216 -~~~~~~~~-~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 216 -SGFTERLS-LCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp -GTTCCEEE-EEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred -CCeecccc-ccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 22321010 1111111223333 688999887778999999986654 2332221111122233 3345 49998777
Q ss_pred CCeEEEEecc
Q 016552 347 GGGIVVVDVK 356 (387)
Q Consensus 347 ~~~i~~~d~~ 356 (387)
+..|..+|.+
T Consensus 294 ~~~I~~~~~d 303 (433)
T 4hw6_A 294 KHCIYRVDYN 303 (433)
T ss_dssp TTEEEEEEBC
T ss_pred CCEEEEEeCC
Confidence 8899998876
No 273
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=91.07 E-value=9.1 Score=35.06 Aligned_cols=63 Identities=10% Similarity=0.072 Sum_probs=38.2
Q ss_pred eCCeEEEEeCC---------CCeEEEEeCCCCceeEccccccccCceE-EEEeCCe-EEEEec-CCCeEEEEeccCC
Q 016552 294 DEEVLYGIDEN---------SCTLSRYDEVMDDWKEVVKSDLLKGARH-AAAGGGR-VCAVCE-NGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~~~~ly~~~~~---------~~~l~~yd~~~~~W~~v~~~~~~~~~~~-~~~~~g~-i~v~gg-~~~~i~~~d~~~~ 358 (387)
.+++||+.... ++.|+++|.++.+= +...+....... .+.-+|+ +++++. +.+.+.++|..+.
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 35789997531 35799999987643 333322222332 3344566 455544 5789999999854
No 274
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=90.80 E-value=14 Score=36.81 Aligned_cols=100 Identities=9% Similarity=0.008 Sum_probs=51.8
Q ss_pred eEEEEECCC-CccccCeEEcCCC-CCCCccccceEEEEECCE-EEEEeee----CCeEEEEECCCCceeecccccccCCC
Q 016552 215 SVEKWDLMN-GEKNSRWEKTGEL-KDGRFSREAIDAVGWKGK-LCLVNVK----GAEGAVYDVVANTWDDMREGMVRGWR 287 (387)
Q Consensus 215 ~v~~yd~~~-~~~~~~W~~~~~~-p~~~~~~~~~~~~~~~g~-lyv~gg~----~~~i~~yD~~~~~W~~~~~~~~~~~~ 287 (387)
.+.++|..+ .+ -..+... ...... ...+. -||+ |++.... ...+..+|+.+++...+-......+.
T Consensus 264 ~l~~~d~~~~~~----~~~~~~~~~~~~~~--~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQAQ----TQWIDLGKEQDIYL--ARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTCC----CEEECCCSCSSEEE--EEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred EEEEEECCCCCc----eEEecCCCCcceEE--EEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcC
Confidence 678889888 76 4444321 111110 12233 5555 4443321 15788999998877655332222211
Q ss_pred ---CcEEEEeCCeEEEEeCCCC--eEEEEeCCCCceeEcc
Q 016552 288 ---GPVAAMDEEVLYGIDENSC--TLSRYDEVMDDWKEVV 322 (387)
Q Consensus 288 ---~~~~~~~~~~ly~~~~~~~--~l~~yd~~~~~W~~v~ 322 (387)
.......+|++++.+..++ .|+.+|.++. ...+.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred CcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 1112233666666665554 5888887666 55443
No 275
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=90.79 E-value=2.7 Score=35.81 Aligned_cols=146 Identities=13% Similarity=0.026 Sum_probs=76.2
Q ss_pred ECCEEEEEecccCCCCCCCCccEEEe---------------ccCCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCC
Q 016552 145 LSGKLILLAATTHNFNPALTRPLIFD---------------PICRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQ 207 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd---------------~~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~ 207 (387)
..|.+|++-|. .+|+++ +.+..|..||+.+-.....-++. .++++|++-|.
T Consensus 12 ~~ge~~fFk~~---------~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg~--- 79 (225)
T 3oyo_A 12 SEYEVYFFAKN---------KYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSGN--- 79 (225)
T ss_dssp STTEEEEEETT---------EEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEETT---
T ss_pred CCCEEEEEECC---------EEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcCC---
Confidence 36788888762 345555 23455666654332222222332 57899999763
Q ss_pred CCCCCcceEEEEECCCCccccCeEEc--------CCCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEECCCCcee
Q 016552 208 FSSDVAKSVEKWDLMNGEKNSRWEKT--------GELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWD 276 (387)
Q Consensus 208 ~~~~~~~~v~~yd~~~~~~~~~W~~~--------~~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~~~~W~ 276 (387)
..++||..+++...+-..- +.+|...+. ....+|.. ++++|++.| +..+.||..+++..
T Consensus 80 -------~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~-~~IDAA~~~~~~gk~yfFkG--~~yw~~d~~~~~~~ 149 (225)
T 3oyo_A 80 -------HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFE-DSIDSAFRSTKGKEVYLFKG--NKYVRIAYDSKQLV 149 (225)
T ss_dssp -------EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTT-SCCCEEEECSSTTEEEEEET--TEEEEEETTTTEEE
T ss_pred -------EEEEEecccccCCCceecCchhhhhcCCCCCCcccc-cccceEEEECCCCcEEEEeC--CeEEEEECCCCeec
Confidence 5577766432110001110 122221000 01334443 689999977 46899997766544
Q ss_pred ecc----ccccc------CCCCcEEEE--eCCeEEEEeCCCCeEEEEeCC
Q 016552 277 DMR----EGMVR------GWRGPVAAM--DEEVLYGIDENSCTLSRYDEV 314 (387)
Q Consensus 277 ~~~----~~~~~------~~~~~~~~~--~~~~ly~~~~~~~~l~~yd~~ 314 (387)
.-+ ...+. .....++.. .++++|++-+ ...+.||..
T Consensus 150 ~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--~~ywr~d~~ 197 (225)
T 3oyo_A 150 GNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--QNYVRIDFT 197 (225)
T ss_dssp EEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--TEEEEEECC
T ss_pred CCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--CEEEEEeCC
Confidence 311 11111 111234444 3789999964 478999998
No 276
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=90.69 E-value=15 Score=36.77 Aligned_cols=132 Identities=13% Similarity=0.025 Sum_probs=73.4
Q ss_pred ceEEEEECCCC--ccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeC---CeEEEEECCCC---ceeecccccccC
Q 016552 214 KSVEKWDLMNG--EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG---AEGAVYDVVAN---TWDDMREGMVRG 285 (387)
Q Consensus 214 ~~v~~yd~~~~--~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~---~~i~~yD~~~~---~W~~~~~~~~~~ 285 (387)
+.++++|..+. + |..+..-..... ......++++|+....+ ..+..+|+.+. .|+.+-+.....
T Consensus 259 ~~i~~~d~~~~~~~----~~~l~~~~~~~~----~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 330 (693)
T 3iuj_A 259 NRLYVKDLSQENAP----LLTVQGDLDADV----SLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV 330 (693)
T ss_dssp CEEEEEETTSTTCC----CEEEECSSSSCE----EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred cEEEEEECCCCCCc----eEEEeCCCCceE----EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE
Confidence 47888898766 5 777653221111 12234578898886543 67899998764 487654322221
Q ss_pred CCCcEEEEeCCeEEEEeCCCC--eEEEEeCCCCceeEccccccccCceEEEE--eC-CeEEEEecC---CCeEEEEeccC
Q 016552 286 WRGPVAAMDEEVLYGIDENSC--TLSRYDEVMDDWKEVVKSDLLKGARHAAA--GG-GRVCAVCEN---GGGIVVVDVKA 357 (387)
Q Consensus 286 ~~~~~~~~~~~~ly~~~~~~~--~l~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~-g~i~v~gg~---~~~i~~~d~~~ 357 (387)
. .....++.|++.....+ .|+.+|.+++....+.. +.. +....+. .+ +.+++.... -..++.+|+.+
T Consensus 331 --~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~-p~~-~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 331 --L-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVAL-PGL-GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp --E-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECC-SSS-SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred --E-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeec-CCC-ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 1 45556777766554343 68999998765555432 211 1111111 13 334444222 26788888875
Q ss_pred C
Q 016552 358 A 358 (387)
Q Consensus 358 ~ 358 (387)
+
T Consensus 406 g 406 (693)
T 3iuj_A 406 G 406 (693)
T ss_dssp C
T ss_pred C
Confidence 4
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=90.13 E-value=10 Score=34.19 Aligned_cols=146 Identities=7% Similarity=-0.021 Sum_probs=79.0
Q ss_pred ceEEEEECCCCccccCeEEcCCCCCCC---ccccceEEEEE-----CCEEEEEeee-------------CCeEEEEECC-
Q 016552 214 KSVEKWDLMNGEKNSRWEKTGELKDGR---FSREAIDAVGW-----KGKLCLVNVK-------------GAEGAVYDVV- 271 (387)
Q Consensus 214 ~~v~~yd~~~~~~~~~W~~~~~~p~~~---~~~~~~~~~~~-----~g~lyv~gg~-------------~~~i~~yD~~- 271 (387)
..|.++|+..+. =.++ ..+... .......++.+ +|+|+++... ...+.+||+.
T Consensus 35 g~V~~~~~~~~~----~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~ 109 (334)
T 2p9w_A 35 GRIEVYNPKTQS----HFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPL 109 (334)
T ss_dssp TEEEEECTTTCC----EEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSC
T ss_pred CEEEEEcCCCCe----EEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCc
Confidence 478888888665 4444 233210 00011234444 5788885331 1568999988
Q ss_pred --CC--ceeec-cccccc-------CC--CCcEEEEeCCeEEEEeCCC-CeEEEEeCCCCc---eeEcccc-ccccCceE
Q 016552 272 --AN--TWDDM-REGMVR-------GW--RGPVAAMDEEVLYGIDENS-CTLSRYDEVMDD---WKEVVKS-DLLKGARH 332 (387)
Q Consensus 272 --~~--~W~~~-~~~~~~-------~~--~~~~~~~~~~~ly~~~~~~-~~l~~yd~~~~~---W~~v~~~-~~~~~~~~ 332 (387)
++ .|..- ...... .. ....++-.+|..|+.+... +.|+.+|++... |..-.+. ....+..+
T Consensus 110 ~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nG 189 (334)
T 2p9w_A 110 SENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSG 189 (334)
T ss_dssp CTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSE
T ss_pred CCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcce
Confidence 44 45422 110100 11 1122222367899987666 889999998763 4321111 12334556
Q ss_pred EEEe-CCeEEEEecCCCeEEEEeccCCCCCCceEEe
Q 016552 333 AAAG-GGRVCAVCENGGGIVVVDVKAAAAPTIFVVD 367 (387)
Q Consensus 333 ~~~~-~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~~ 367 (387)
++.. +|+++++...+..++.+|+.+. -.|.+.
T Consensus 190 Iv~~pdg~~Liv~~~~g~L~~fD~~~p---v~~~v~ 222 (334)
T 2p9w_A 190 ITFDPHSNKLIAFGGPRALTAFDVSKP---YAWPEP 222 (334)
T ss_dssp EEEETTTTEEEEESSSSSEEEEECSSS---SCCCEE
T ss_pred EEEeCCCCEEEEEcCCCeEEEEcCCCC---cceeec
Confidence 6766 5655555444888999998842 345553
No 278
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=90.02 E-value=9.7 Score=33.67 Aligned_cols=167 Identities=11% Similarity=-0.029 Sum_probs=80.2
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEEE-eCC-EEEEEecCC-C-----------------CCCCCCcceEEEEECCC
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRG-AVYVASGIG-S-----------------QFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~-~iyv~GG~~-~-----------------~~~~~~~~~v~~yd~~~ 223 (387)
..++++|..+++.+.+...+. ....+. -++ .|++..... . .+.......+.++|..+
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred ceEEEEECCCCceEEEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 358899998888777654432 111221 244 454443210 0 00001134688899988
Q ss_pred CccccCe-EEcCCCCCCCccccceEEEEECCEEEEEeee---------CCeEEEEECCCCceeecccccccCCCCcEEEE
Q 016552 224 GEKNSRW-EKTGELKDGRFSREAIDAVGWKGKLCLVNVK---------GAEGAVYDVVANTWDDMREGMVRGWRGPVAAM 293 (387)
Q Consensus 224 ~~~~~~W-~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~---------~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~ 293 (387)
++ . ..+.. + . .. .....-+| +++.+.. ...++.+| ++++..+... . .......
T Consensus 162 ~~----~~~~l~~-~-~-~~---~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~-~~~~~sp 224 (347)
T 2gop_A 162 EE----VIEEFEK-P-R-FS---SGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK---V-SFYAVDS 224 (347)
T ss_dssp TE----EEEEEEE-E-T-TC---EEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE---E-SEEEEEE
T ss_pred Ce----EEeeecC-C-C-cc---cccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC---c-ceeeECC
Confidence 87 6 55543 2 1 11 22333356 5555432 12567777 6666665432 1 1112223
Q ss_pred eCCeEEEEeCC-------CCeEEEEeCCCCceeEccccccc-cCceEEEEeCCeEEEEecCCCeEEE-Ee
Q 016552 294 DEEVLYGIDEN-------SCTLSRYDEVMDDWKEVVKSDLL-KGARHAAAGGGRVCAVCENGGGIVV-VD 354 (387)
Q Consensus 294 ~~~~ly~~~~~-------~~~l~~yd~~~~~W~~v~~~~~~-~~~~~~~~~~g~i~v~gg~~~~i~~-~d 354 (387)
.|..|++.... ...|+.+| ++++..+...... ........ ++ +++.+..+..+.+ ++
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~~~ 290 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLYIW 290 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEEEE
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEEEc
Confidence 34456665532 24799999 5666655432111 11112223 55 7666554444444 44
No 279
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.90 E-value=0.74 Score=42.02 Aligned_cols=111 Identities=10% Similarity=-0.000 Sum_probs=60.8
Q ss_pred CCEEEEEeeeCCeEEEEECCCC--ceeecccc--cccCCCCcEEEEeCCeEEEEe-CCCCeEEEEeCCCCceeEcccccc
Q 016552 252 KGKLCLVNVKGAEGAVYDVVAN--TWDDMREG--MVRGWRGPVAAMDEEVLYGID-ENSCTLSRYDEVMDDWKEVVKSDL 326 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~--~~~~~~~~~~~~~~~~ly~~~-~~~~~l~~yd~~~~~W~~v~~~~~ 326 (387)
+|.+|+.... ..++++|.+++ .|+.-... .+.....+.. ..++.+|++. ..+|.|+++|.+++.|+.-...+.
T Consensus 10 ~~~V~v~t~d-G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~-~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 10 SDILIAADVE-GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSR-LETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEETT-SCEEEEETTTTEEEEEECGGGSCCSEECCCSCT-TTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CCEEEEEeCC-CeEEEEECCCCcEEEEecCCccCCcEEecCCcc-ccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 4555554443 37888888777 58754320 1111111111 1356788876 368999999998887664333332
Q ss_pred ccC--ceE----EEE------eCCeEEEEecCCCeEEEEeccCCCCCCceEE
Q 016552 327 LKG--ARH----AAA------GGGRVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 327 ~~~--~~~----~~~------~~g~i~v~gg~~~~i~~~d~~~~~~~~~W~~ 366 (387)
... ++. -+. ..+..+++|..+..++.+|..++ ..+|+.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG--~~~W~~ 137 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG--EIISAF 137 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC--CEEEEE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC--cEEEEE
Confidence 221 111 111 14555666677778888888754 245764
No 280
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.90 E-value=20 Score=35.75 Aligned_cols=180 Identities=14% Similarity=0.039 Sum_probs=91.3
Q ss_pred CCccEEEeccCCcee--eCCCCC-CCCcceeE-EEeCCE-EEEEecCCCCCCCCCcceEEEEECCC------C--ccccC
Q 016552 163 LTRPLIFDPICRTWT--FGPELV-TPRRWCAA-GCSRGA-VYVASGIGSQFSSDVAKSVEKWDLMN------G--EKNSR 229 (387)
Q Consensus 163 ~~~~~vyd~~t~~W~--~l~~~p-~~r~~~~~-~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~~------~--~~~~~ 229 (387)
...+++++..|..-. .+...+ .+...... ..-+++ |++...... .....++++|..+ . .
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~~l~~~d~~~~~~~~~~~~~---- 278 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC----DPVNRLWYCDLQQESNGITGILK---- 278 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS----SSCCEEEEEEGGGSSSSSCSSCC----
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC----CCccEEEEEECcccccccCCccc----
Confidence 345888898887643 111111 12211222 233454 444332211 1135788899876 4 4
Q ss_pred eEEcCCCCCCCccccceEEEEECCEEEEEeeeC---CeEEEEECCCC---ceeecccccccCCCCcEEEEe-CCeEEEEe
Q 016552 230 WEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG---AEGAVYDVVAN---TWDDMREGMVRGWRGPVAAMD-EEVLYGID 302 (387)
Q Consensus 230 W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~---~~i~~yD~~~~---~W~~~~~~~~~~~~~~~~~~~-~~~ly~~~ 302 (387)
+..+..-.... ......-++.||+.+..+ ..+..+|+.+. .|+.+-..... .....++.. ++.|++..
T Consensus 279 ~~~l~~~~~~~----~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 279 WVKLIDNFEGE----YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK-DVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp CEEEECSSSSC----EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CEEEEEEEETTTEEEEEE
T ss_pred eEEeeCCCCcE----EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC-CeEEEEEEEcCCEEEEEE
Confidence 77665322111 111223356788776543 57999999876 58776542211 111233444 77777766
Q ss_pred CCCC--eEEEEeCCCCc-eeEccccccccCceEEEEe--CC-eEEEEecC---CCeEEEEeccCC
Q 016552 303 ENSC--TLSRYDEVMDD-WKEVVKSDLLKGARHAAAG--GG-RVCAVCEN---GGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~--~l~~yd~~~~~-W~~v~~~~~~~~~~~~~~~--~g-~i~v~gg~---~~~i~~~d~~~~ 358 (387)
...+ .|+.+|+++++ ...+.. + .+....+.. ++ .+++.... -..++.+|+.++
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~~-~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFPL-E--VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEECC-C--SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred EECCEEEEEEEECCCCCEEEecCC-C--CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 5444 58889985553 344332 1 222222222 34 44444322 257889998764
No 281
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.86 E-value=6.5 Score=38.02 Aligned_cols=102 Identities=4% Similarity=-0.109 Sum_probs=55.2
Q ss_pred EEEEEeeeCCeEEEEECCCCceee-cccccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceeEccccccccCce
Q 016552 254 KLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGAR 331 (387)
Q Consensus 254 ~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~ 331 (387)
.+.+.++.+..+.++|+.+.+-.. +....... ...+++.. +++.++.++.++.+..||..+..-.. .+.......
T Consensus 324 ~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~-~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~--~l~gH~~~V 400 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS-NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVH--PLVSRETTI 400 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHHCEEEEECSCC-SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCE--EEEECSSCE
T ss_pred eEEEEeccCCeEEEEECCCCCcccccccccccC-cccceEeCCCcCeEEEeCCCCcEEEEECcccccce--eeecCCCce
Confidence 676777777889999987643211 11001100 11234443 46677777777789999987753211 111112222
Q ss_pred EE--EEeCCeEEEEecCCCeEEEEeccCC
Q 016552 332 HA--AAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 332 ~~--~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.. ..-+|+.++.|+....+.++|+.+.
T Consensus 401 ~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 401 TAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred EEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 22 2335667777777777777776543
No 282
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=88.55 E-value=12 Score=38.74 Aligned_cols=143 Identities=8% Similarity=-0.119 Sum_probs=73.5
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
++++.+.|+.+. .+.+||..+.+ -.... +.. . .....+...|++.+.++.+..+.++|+.+++
T Consensus 28 dg~~lAsgs~Dg--------~I~lw~~~~~~----~~~~~--~~~-~--~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 28 TQNLLAIATVTG--------EVHIYGQQQVE----VVIKL--EDR-S--AIKEMRFVKGIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp TTTEEEEEETTS--------EEEEECSTTCE----EEEEC--SSC-C--CEEEEEEETTTEEEEEETTCEEEEEETTTCS
T ss_pred CCCEEEEEeCCC--------EEEEEeCCCcE----EEEEc--CCC-C--CEEEEEEcCCCEEEEEECcCeEEEEECCCCc
Confidence 455566665543 66777766554 22211 111 0 0122333346644445555789999998765
Q ss_pred eeecccccccCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeEcc---------ccccccCce-EEEEe--CCeEE
Q 016552 275 WDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKEVV---------KSDLLKGAR-HAAAG--GGRVC 341 (387)
Q Consensus 275 W~~~~~~~~~~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~v~---------~~~~~~~~~-~~~~~--~g~i~ 341 (387)
-... ........++++ .++..++.+..++.|..||.++..-.... .+....... ++... ++.++
T Consensus 91 ~~~~---~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 91 VLTT---VFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp EEEE---EECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred EEEE---EcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 3211 110101112222 24566667777889999999887542111 111111222 22222 23577
Q ss_pred EEecCCCeEEEEeccCC
Q 016552 342 AVCENGGGIVVVDVKAA 358 (387)
Q Consensus 342 v~gg~~~~i~~~d~~~~ 358 (387)
++|.....+ +||+.+.
T Consensus 168 ~~g~~dg~v-lWd~~~~ 183 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVEN 183 (902)
T ss_dssp EEECSSCEE-EEETTTT
T ss_pred EEEeCCCcE-EEECCCC
Confidence 777777777 9998854
No 283
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=88.50 E-value=21 Score=35.51 Aligned_cols=204 Identities=11% Similarity=0.067 Sum_probs=97.1
Q ss_pred ECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCC-----CCCCcceEEEE
Q 016552 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQF-----SSDVAKSVEKW 219 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~v~~y 219 (387)
-+|+.+++..... ......++++|..+++......++.......+-.-+|+.++++..+... +......+..+
T Consensus 130 PDG~~la~~~~~~--G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 130 WDGKKVAFAQKPN--AADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp TTSSEEEEEEEET--TCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred CCCCEEEEEECCC--CCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 3555555443222 1223578999999998752112222111111222355554444432210 00123468888
Q ss_pred ECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEee-eC---CeEEEEECCCCceeecccccccCCCCcEEEEeC
Q 016552 220 DLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNV-KG---AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDE 295 (387)
Q Consensus 220 d~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg-~~---~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~ 295 (387)
+..++... =..+...+..... .......-||+..++.. .. ..++.+|..+..|..+..... . ....+..+
T Consensus 208 ~l~t~~~~--~~lv~~~~~~~~~-~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-~--~~~~~~~~ 281 (695)
T 2bkl_A 208 TLGTEPSK--DTVVHERTGDPTT-FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG-A--KYEVHAWK 281 (695)
T ss_dssp ETTSCGGG--CEEEECCCCCTTC-EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS-C--CEEEEEET
T ss_pred ECCCCchh--ceEEEecCCCCEE-EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC-c--eEEEEecC
Confidence 88877611 1122211111000 00112223565333322 22 367777777777877654211 1 11222245
Q ss_pred CeEEEEeC---CCCeEEEEeCCCCc---eeEccccccccCceEEEEeCCeEEEEecCC--CeEEEEecc
Q 016552 296 EVLYGIDE---NSCTLSRYDEVMDD---WKEVVKSDLLKGARHAAAGGGRVCAVCENG--GGIVVVDVK 356 (387)
Q Consensus 296 ~~ly~~~~---~~~~l~~yd~~~~~---W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~--~~i~~~d~~ 356 (387)
|.+|+... ..+.|+.+|.++.. |+.+........-..+...++++++....+ ..++++|..
T Consensus 282 g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 282 DRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp TEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred CcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC
Confidence 55776654 24689999997764 887654321111111223378887776533 466777764
No 284
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=88.43 E-value=13 Score=37.34 Aligned_cols=145 Identities=8% Similarity=-0.057 Sum_probs=79.5
Q ss_pred CCccEEEeccCC--c-eeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCC--CccccCeEEcCCCC
Q 016552 163 LTRPLIFDPICR--T-WTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMN--GEKNSRWEKTGELK 237 (387)
Q Consensus 163 ~~~~~vyd~~t~--~-W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~--~~~~~~W~~~~~~p 237 (387)
..+++++|..+. . |+.+.+-....... ....++.||+....+. ....+.++|..+ .. |..+-+-.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~-----~~~~l~~~d~~~~~~~----~~~l~~~~ 362 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGA-----PLKKIVRVDLSGSTPR----FDTVVPES 362 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTC-----TTCEEEEEECSSSSCE----EEEEECCC
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCC-----CCCEEEEEeCCCCccc----cEEEecCC
Confidence 457899999887 6 88775433222222 2345667877754321 234688899877 56 98876332
Q ss_pred CCCccccceEEEEECCEEEEEeeeC--CeEEEEECCCCceeecccccccCCCCcEEEE--eCCeEEEEeCC---CCeEEE
Q 016552 238 DGRFSREAIDAVGWKGKLCLVNVKG--AEGAVYDVVANTWDDMREGMVRGWRGPVAAM--DEEVLYGIDEN---SCTLSR 310 (387)
Q Consensus 238 ~~~~~~~~~~~~~~~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~--~~~~ly~~~~~---~~~l~~ 310 (387)
.... ......++.+++....+ ..++.+|+..+.-..+.. +.......+.. .++.|++...+ .+.++.
T Consensus 363 ~~~l----~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~--~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~ 436 (741)
T 1yr2_A 363 KDNL----ESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSL--PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLA 436 (741)
T ss_dssp SSEE----EEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBC--SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEE
T ss_pred CCeE----EEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccC--CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 2111 12234478887776554 467788875544444431 11100111111 23345544321 257999
Q ss_pred EeCCCCceeEccc
Q 016552 311 YDEVMDDWKEVVK 323 (387)
Q Consensus 311 yd~~~~~W~~v~~ 323 (387)
||.++++.+.+..
T Consensus 437 ~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 437 LDPATAKTTPWEP 449 (741)
T ss_dssp EETTTTEEEECSC
T ss_pred EECCCCcEEEEec
Confidence 9999888766643
No 285
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=87.48 E-value=16 Score=32.98 Aligned_cols=135 Identities=10% Similarity=0.029 Sum_probs=71.2
Q ss_pred eEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEE-E
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-M 293 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~ 293 (387)
.+.++|+.+.+ -......... .. ..+..-+|++.+.+. ...+.+++..++.-..............+++ .
T Consensus 158 ~i~iwd~~~~~----~~~~~~~~~~-V~---~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs 228 (365)
T 4h5i_A 158 IMRIIDPSDLT----EKFEIETRGE-VK---DLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFI 228 (365)
T ss_dssp EEEEEETTTTE----EEEEEECSSC-CC---EEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEE
T ss_pred EEEEeECCCCc----EEEEeCCCCc-eE---EEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEc
Confidence 78899998887 4332211111 10 112223677655544 3467888877765432211011111111222 3
Q ss_pred eCCeEEEEeCCCC----eEEEEeCCCCceeEccc--cccccCceE--EEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 294 DEEVLYGIDENSC----TLSRYDEVMDDWKEVVK--SDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~~~~ly~~~~~~~----~l~~yd~~~~~W~~v~~--~~~~~~~~~--~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.++..++.+..++ .++.||........... ......... .+.-+|++++.|+....|.+||..+.
T Consensus 229 pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 229 ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 4666666554222 47778877665544322 122222222 23457888888888888999999864
No 286
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=87.26 E-value=10 Score=35.92 Aligned_cols=198 Identities=14% Similarity=0.100 Sum_probs=101.0
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceee--CCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF--GPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~--l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 223 (387)
++++|++.| +.+|+||..+++..+ .+-++ . .-++...++++|++-|. ..+.||..+
T Consensus 158 ~~~~yfFkG---------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~----------~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQG---------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGN----------QFLRFNPVS 215 (460)
T ss_dssp SSEEEEEET---------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETT----------EEEEECTTT
T ss_pred CCeEEEEec---------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECC----------EEEEEcCcc
Confidence 678888887 357999998876543 12222 2 23444557899999775 335566544
Q ss_pred Ccccc--------CeEEcCCCCCC--------------Ccc-ccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceee-
Q 016552 224 GEKNS--------RWEKTGELKDG--------------RFS-REAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDD- 277 (387)
Q Consensus 224 ~~~~~--------~W~~~~~~p~~--------------~~~-~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~- 277 (387)
.+..- .|-..+....+ ... .....++. .+|++|++-| ...+.||...+.+..
T Consensus 216 ~~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg--~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 216 GEVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG--SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp CCCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET--TEEEECTTGGGCCCCE
T ss_pred CcccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC--CEEEEEecCCCCcCcc
Confidence 32100 02222111000 000 00122333 4689999876 357777776543321
Q ss_pred -ccc---ccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEccc----------cccc---cC-ceEEEE-eCC
Q 016552 278 -MRE---GMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVVK----------SDLL---KG-ARHAAA-GGG 338 (387)
Q Consensus 278 -~~~---~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~----------~~~~---~~-~~~~~~-~~g 338 (387)
+.. .+|.. ..++...++++|++-+ ...++|+..++ .+.+.. +|.. .. .+++.. ..+
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG--~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~~~~~~ 368 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD--TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSS 368 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET--TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC--CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEEeCCCC
Confidence 111 11111 2344456789999954 47888986542 222221 1111 11 222222 458
Q ss_pred eEEEEecCCCeEEEEeccCCCCCCceEE--eCCCCceeE
Q 016552 339 RVCAVCENGGGIVVVDVKAAAAPTIFVV--DTPLGFEAL 375 (387)
Q Consensus 339 ~i~v~gg~~~~i~~~d~~~~~~~~~W~~--~~p~~~~~~ 375 (387)
++|+|.| +..+.||....++ .++.. ..|...+++
T Consensus 369 ktyfFkG--~~ywryd~~~~Pr-~i~~~~~gi~~~vdAa 404 (460)
T 1qhu_A 369 RLHIMAG--RRLWWLDLKSGAQ-ATWTELPWPHEKVDGA 404 (460)
T ss_dssp EEEEEET--TEEEEEEGGGGGG-CCCEEECCSCSCCSEE
T ss_pred EEEEEEC--CEEEEEECCCCcc-chhhhCCCCCCCcCEE
Confidence 9999954 4677888875422 34432 234444443
No 287
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=86.51 E-value=5.3 Score=36.66 Aligned_cols=105 Identities=8% Similarity=-0.020 Sum_probs=56.2
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCceeEcccc-----
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE-VLYGIDENSCTLSRYDEVMDDWKEVVKS----- 324 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~-~ly~~~~~~~~l~~yd~~~~~W~~v~~~----- 324 (387)
++++.+.++.+..+.++|+.++.=.... ........+++.. ++ .+++.+..++.+..||..+..-......
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~--~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~ 232 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAG--YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVK 232 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEE--EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CS
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeee--cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcc
Confidence 6778788888888999998665321111 1111112234443 33 4666666788999999887643221100
Q ss_pred ----------cc--------ccCc-eEEE--EeCCeEEEEecCCCeEEEEeccCC
Q 016552 325 ----------DL--------LKGA-RHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 325 ----------~~--------~~~~-~~~~--~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+. .... ..+. ..+++.++.+..+..+.++|+...
T Consensus 233 ~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 233 NPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp CCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred cceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 00 0011 1111 246777777777888999988754
No 288
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=86.29 E-value=18 Score=32.44 Aligned_cols=138 Identities=11% Similarity=0.055 Sum_probs=66.0
Q ss_pred ceEEEEECC-CCccccCeEEcCCC--CC-CCccccceEEEEECC-EEEEEeeeCCeEEEEE--CCCCcee----eccccc
Q 016552 214 KSVEKWDLM-NGEKNSRWEKTGEL--KD-GRFSREAIDAVGWKG-KLCLVNVKGAEGAVYD--VVANTWD----DMREGM 282 (387)
Q Consensus 214 ~~v~~yd~~-~~~~~~~W~~~~~~--p~-~~~~~~~~~~~~~~g-~lyv~gg~~~~i~~yD--~~~~~W~----~~~~~~ 282 (387)
+.+.+||.. +++ ...+... +. .... .+.+..-+| .+|+.+...+.+.+|+ .++++.. .+.. .
T Consensus 167 ~~v~~~~~~~~g~----~~~~~~~~~~~~g~~p--~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~-~ 239 (365)
T 1jof_A 167 NKLWTHRKLASGE----VELVGSVDAPDPGDHP--RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL-I 239 (365)
T ss_dssp TEEEEEEECTTSC----EEEEEEEECSSTTCCE--EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES-S
T ss_pred CEEEEEEECCCCC----EEEeeeEecCCCCCCC--CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc-C
Confidence 378889987 666 5543221 11 1111 022223356 4676654445677765 4455542 2222 2
Q ss_pred ccCC---C--------CcEEE-E-eCC-eEEEEeCCCC-----eEEEEeCC-CCceeEccc-cc--c-ccCceEEEE---
Q 016552 283 VRGW---R--------GPVAA-M-DEE-VLYGIDENSC-----TLSRYDEV-MDDWKEVVK-SD--L-LKGARHAAA--- 335 (387)
Q Consensus 283 ~~~~---~--------~~~~~-~-~~~-~ly~~~~~~~-----~l~~yd~~-~~~W~~v~~-~~--~-~~~~~~~~~--- 335 (387)
+.+. . ...++ + -+| .||+.....+ .|.+||.+ +++...+.. .+ . .....+...
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~ 319 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPW 319 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTT
T ss_pred CCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCc
Confidence 2221 1 12233 2 244 5776543223 79999875 555544221 11 1 111222222
Q ss_pred eCCeEEEEecCCCeEEEEeccCC
Q 016552 336 GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 336 ~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
-+..|++.+.+++.+.+|+++..
T Consensus 320 dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 320 SDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCEEEEEEcCCCeEEEEEEchh
Confidence 24455555455688999988743
No 289
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=85.88 E-value=30 Score=34.48 Aligned_cols=199 Identities=11% Similarity=0.080 Sum_probs=98.4
Q ss_pred ECCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEE-eCC-EEEEEecCCCC--------CCCCCcc
Q 016552 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGC-SRG-AVYVASGIGSQ--------FSSDVAK 214 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~--------~~~~~~~ 214 (387)
-+|+.++++.... ......++++|..+++...... .... ....+- -++ .||... .+.. .......
T Consensus 134 PDg~~la~~~~~~--G~~~~~i~v~d~~tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~-~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 134 EDGEYFAYGLSAS--GSDWVTIKFMKVDGAKELPDVL-ERVK-FSCMAWTHDGKGMFYNA-YPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp TTSSEEEEEEEET--TCSCEEEEEEETTTTEEEEEEE-EEEC-SCCEEECTTSSEEEEEE-CCCCSSCCSSSCCCCCCCC
T ss_pred CCCCEEEEEEcCC--CCceEEEEEEECCCCCCCcccc-cCcc-cceEEEEeCCCEEEEEE-ECCccccccccccccCCCC
Confidence 3555555543222 1122368999999998776421 1111 111222 244 454443 2211 0002234
Q ss_pred eEEEEECCCCccccCeE--EcCCCCC-CCccccceEEEEECCEEEEEeee-----CCeEEEEECCC------C--ceeec
Q 016552 215 SVEKWDLMNGEKNSRWE--KTGELKD-GRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVA------N--TWDDM 278 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~--~~~~~p~-~~~~~~~~~~~~~~g~lyv~gg~-----~~~i~~yD~~~------~--~W~~~ 278 (387)
.+.+++..+++ -. .+...+. +.+. ......-||+..++... ...++.+|..+ . .+..+
T Consensus 209 ~v~~~~l~t~~----~~~~~v~~~~~~~~~~--~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 209 KLYYHVLGTDQ----SEDILCAEFPDEPKWM--GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp EEEEEETTSCG----GGCEEEECCTTCTTCE--EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred EEEEEECCCCc----ccceEEeccCCCCeEE--EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence 57888888776 32 2211111 1110 01222336653333322 35788899876 4 57766
Q ss_pred ccccccCCCCcEEEEeCCeEEEEeCC---CCeEEEEeCCCC---ceeEccccccccCceEEEEe-CCeEEEEecCC--Ce
Q 016552 279 REGMVRGWRGPVAAMDEEVLYGIDEN---SCTLSRYDEVMD---DWKEVVKSDLLKGARHAAAG-GGRVCAVCENG--GG 349 (387)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~ly~~~~~---~~~l~~yd~~~~---~W~~v~~~~~~~~~~~~~~~-~g~i~v~gg~~--~~ 349 (387)
..... . ........|+.||+.... ...|+.+|.++. .|+.+........-..+... ++.+++....+ ..
T Consensus 283 ~~~~~-~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 283 IDNFE-G-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp ECSSS-S-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred eCCCC-c-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 54211 1 112233457788888653 347999999875 58876543221111122334 67777766433 46
Q ss_pred EEEEecc
Q 016552 350 IVVVDVK 356 (387)
Q Consensus 350 i~~~d~~ 356 (387)
++++|+.
T Consensus 361 l~~~~~~ 367 (710)
T 2xdw_A 361 LQLHDLA 367 (710)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 7888874
No 290
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=85.81 E-value=19 Score=37.82 Aligned_cols=98 Identities=15% Similarity=0.044 Sum_probs=53.5
Q ss_pred eEE-EEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEE
Q 016552 215 SVE-KWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM 293 (387)
Q Consensus 215 ~v~-~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~ 293 (387)
.++ +||..+.+ -..+.... ... ...+..-||+..+++.....+.++|+++++-..+..... +. ...++.
T Consensus 359 ~l~~~~d~~~~~----~~~l~~~~-~~~---~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~-~~-v~~~~~ 428 (1045)
T 1k32_A 359 DFLGIYDYRTGK----AEKFEENL-GNV---FAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE-AM-ITDFTI 428 (1045)
T ss_dssp EEEEEEETTTCC----EEECCCCC-CSE---EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-SC-CCCEEE
T ss_pred ceEEEEECCCCC----ceEecCCc-cce---eeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC-CC-ccceEE
Confidence 677 88988877 66554111 111 112223367766665555689999999887655532111 11 112222
Q ss_pred -eCCeEEEEeCC----------CCeEEEEeCCCCceeEcc
Q 016552 294 -DEEVLYGIDEN----------SCTLSRYDEVMDDWKEVV 322 (387)
Q Consensus 294 -~~~~ly~~~~~----------~~~l~~yd~~~~~W~~v~ 322 (387)
-+|+.+++... .+.+++||.++.+...+.
T Consensus 429 SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 429 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred CCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 34553333322 137999999987644443
No 291
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=85.41 E-value=28 Score=34.08 Aligned_cols=185 Identities=15% Similarity=0.007 Sum_probs=98.6
Q ss_pred CCccEEEeccCCceeeCCCCCCCCcceeEEE----eCCEEEEEecCCCC--CC-------CCCcceEEEEECCCCccccC
Q 016552 163 LTRPLIFDPICRTWTFGPELVTPRRWCAAGC----SRGAVYVASGIGSQ--FS-------SDVAKSVEKWDLMNGEKNSR 229 (387)
Q Consensus 163 ~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~----~~~~iyv~GG~~~~--~~-------~~~~~~v~~yd~~~~~~~~~ 229 (387)
...+.+.|+.+.+=.++-.+|....-+..+. -++.+|+.+-.... .+ ....+.+-+.|.++.+..
T Consensus 111 ~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~-- 188 (595)
T 1fwx_A 111 NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA-- 188 (595)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE--
T ss_pred CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE--
Confidence 3579999999987555334554333344443 24578877533110 01 123346788899887744
Q ss_pred eEEcC-CCCCCCccccceEEEEECCE-EEEEeeeC-------------------------------------CeEEEEEC
Q 016552 230 WEKTG-ELKDGRFSREAIDAVGWKGK-LCLVNVKG-------------------------------------AEGAVYDV 270 (387)
Q Consensus 230 W~~~~-~~p~~~~~~~~~~~~~~~g~-lyv~gg~~-------------------------------------~~i~~yD~ 270 (387)
|+..- .-|.. ..+..+|+ +|+..... +.+-+.|.
T Consensus 189 ~qI~Vgg~pd~-------~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~ 261 (595)
T 1fwx_A 189 WQVLVSGNLDN-------CDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDG 261 (595)
T ss_dssp EEEEESSCCCC-------EEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEEC
T ss_pred EEEEeCCCccc-------eEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeC
Confidence 65332 22211 12222332 33322110 35778888
Q ss_pred CCCceee-cccccccCCCCcEEEE--eCCeEEEEeCCCCeEEEEeCCCCc-ee---------EccccccccC-ceEEEEe
Q 016552 271 VANTWDD-MREGMVRGWRGPVAAM--DEEVLYGIDENSCTLSRYDEVMDD-WK---------EVVKSDLLKG-ARHAAAG 336 (387)
Q Consensus 271 ~~~~W~~-~~~~~~~~~~~~~~~~--~~~~ly~~~~~~~~l~~yd~~~~~-W~---------~v~~~~~~~~-~~~~~~~ 336 (387)
.+.+.+. +.. .+.+-.-+++.+ .|..+|+-+..++.+.+||.++.. +. .+...+.-.+ .+....-
T Consensus 262 ~~~~~~~~~~~-Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~ 340 (595)
T 1fwx_A 262 RKEASSLFTRY-IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDG 340 (595)
T ss_dssp SGGGCCSSEEE-EEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECT
T ss_pred cccCCceeEEE-EecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECC
Confidence 8744333 111 222222233333 244577776667899999998642 10 1112222222 3444455
Q ss_pred CCeEEEEecCCCeEEEEeccC
Q 016552 337 GGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 337 ~g~i~v~gg~~~~i~~~d~~~ 357 (387)
+|.+|+.-.-.+.+.+||+++
T Consensus 341 dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 341 RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TSEEEEEETTTTEEEEEEHHH
T ss_pred CCeEEEEEecCCcEEEEEhhH
Confidence 678888877788899999885
No 292
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=85.40 E-value=26 Score=34.91 Aligned_cols=145 Identities=14% Similarity=0.079 Sum_probs=79.8
Q ss_pred CccEEEeccCC--ceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCc
Q 016552 164 TRPLIFDPICR--TWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 164 ~~~~vyd~~t~--~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~ 241 (387)
++++++|..+. .|+.+.+-.... .......++++|+....+. ....+.++|..+.... .|+.+.+-...
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~~~t~~~~-----~~~~l~~~d~~~~~~~-~~~~l~~~~~~-- 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDAD-VSLVDNKGSTLYLLTNRDA-----PNRRLVTVDAANPGPA-HWRDLIPERQQ-- 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC-----TTCEEEEEETTSCCGG-GCEEEECCCSS--
T ss_pred cEEEEEECCCCCCceEEEeCCCCce-EEEEeccCCEEEEEECCCC-----CCCEEEEEeCCCCCcc-ccEEEecCCCC--
Confidence 57888888765 677664322211 1223445788988865432 2347788888764310 18876533221
Q ss_pred cccceEEEEECCEEEEEeeeC--CeEEEEECCCCceeecccccccCCCCcEEEE----eCCeEEEEeCC---CCeEEEEe
Q 016552 242 SREAIDAVGWKGKLCLVNVKG--AEGAVYDVVANTWDDMREGMVRGWRGPVAAM----DEEVLYGIDEN---SCTLSRYD 312 (387)
Q Consensus 242 ~~~~~~~~~~~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~----~~~~ly~~~~~---~~~l~~yd 312 (387)
. ......++.|++....+ ..+.++|+..+....+.. +.. +....+ .++.|++.... -+.++.||
T Consensus 330 ~---~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~--p~~--~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 330 V---LTVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVAL--PGL--GSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp C---EEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECC--SSS--SEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred E---EEEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeec--CCC--ceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 1 22334456666554443 468899988665555532 111 111111 23455554321 26899999
Q ss_pred CCCCceeEcccc
Q 016552 313 EVMDDWKEVVKS 324 (387)
Q Consensus 313 ~~~~~W~~v~~~ 324 (387)
.++++.+.+...
T Consensus 403 ~~~g~~~~l~~~ 414 (693)
T 3iuj_A 403 PKSGAISLYRAS 414 (693)
T ss_dssp TTTCCEEEEECC
T ss_pred CCCCeEEEEEeC
Confidence 998887776543
No 293
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.41 E-value=24 Score=32.18 Aligned_cols=147 Identities=13% Similarity=0.077 Sum_probs=78.1
Q ss_pred cEEEeccC--CceeeCCCCCCCCcceeEEEe---CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCC---C
Q 016552 166 PLIFDPIC--RTWTFGPELVTPRRWCAAGCS---RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGEL---K 237 (387)
Q Consensus 166 ~~vyd~~t--~~W~~l~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~---p 237 (387)
+++++... .+|+...+........+.+.. ++.||+.+.... .-..+...+-...+ |+.+... +
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~-----~g~gl~~s~D~G~t----W~~~~~~~~~~ 103 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGH-----LGPTVFRSDDGGGN----WTEATRPPAFN 103 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-------CCEEEEEESSTTSC----CEECSBCCCCC
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCC-----CCccEEEeCCCCCC----ceECCccccCC
Confidence 67777655 789876422222223333333 467888754321 00134445445566 9988632 2
Q ss_pred CCCc-----cccceEEEEE-----CCEEEEEeeeCCeEEEEECCCCceeeccccc--cc--------------CCCCcEE
Q 016552 238 DGRF-----SREAIDAVGW-----KGKLCLVNVKGAEGAVYDVVANTWDDMREGM--VR--------------GWRGPVA 291 (387)
Q Consensus 238 ~~~~-----~~~~~~~~~~-----~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~--~~--------------~~~~~~~ 291 (387)
.... ......++.. .+.+|+.+.. ..++..+-...+|+.+.... +. ......+
T Consensus 104 ~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~-ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i 182 (394)
T 3b7f_A 104 KAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP-QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSI 182 (394)
T ss_dssp CCC----CCCCCEEEEEEECCTTSTTCEEEEEET-TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEE
T ss_pred CcccccccccccceeEEEeCCCCCCCEEEEEecC-CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEE
Confidence 1100 0001222333 4778876543 36778877788999875311 10 0011234
Q ss_pred EEe---CCeEEEEeCCCCeEEEEeCCCCceeEccc
Q 016552 292 AMD---EEVLYGIDENSCTLSRYDEVMDDWKEVVK 323 (387)
Q Consensus 292 ~~~---~~~ly~~~~~~~~l~~yd~~~~~W~~v~~ 323 (387)
++. .+.||+... .+.|+..+....+|+.+..
T Consensus 183 ~~d~~~~~~l~vg~~-~ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 183 LVDPRDPKHLYIGMS-SGGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp EECTTCTTCEEEEEE-TBEEEEESSTTSSCEECCT
T ss_pred EECCCCCCEEEEEEC-CCCEEEECCCCCCceECCC
Confidence 443 356887643 3568888888999998753
No 294
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=83.58 E-value=36 Score=33.59 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=47.0
Q ss_pred eEEEEECCCCccccCe-EEcCCCCCCCccccce--EEEEECCEEEEEeeeC----CeEEEEECCCCceeecccccccCCC
Q 016552 215 SVEKWDLMNGEKNSRW-EKTGELKDGRFSREAI--DAVGWKGKLCLVNVKG----AEGAVYDVVANTWDDMREGMVRGWR 287 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W-~~~~~~p~~~~~~~~~--~~~~~~g~lyv~gg~~----~~i~~yD~~~~~W~~~~~~~~~~~~ 287 (387)
.+.++|..+.+ - ..+............. .+..-||++.+..... ..+..+|+.+++...+-.....++.
T Consensus 229 ~l~~~d~~~~~----~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 304 (723)
T 1xfd_A 229 SLHVIGLNGPT----HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWL 304 (723)
T ss_dssp EEEEEESSSSC----CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred EEEEEECCCCc----eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEE
Confidence 78889988776 3 3333211000000001 1222377765443221 4688899988876544221111221
Q ss_pred C---cEEEE--eCCeEEEE-eCCCC------eEEEEe-CCCCc
Q 016552 288 G---PVAAM--DEEVLYGI-DENSC------TLSRYD-EVMDD 317 (387)
Q Consensus 288 ~---~~~~~--~~~~ly~~-~~~~~------~l~~yd-~~~~~ 317 (387)
. ..++. .|..|++. ...++ .|+.|| ..+..
T Consensus 305 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 305 HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred eccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 1 12222 34446665 33344 588898 45544
No 295
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=83.56 E-value=18 Score=30.10 Aligned_cols=145 Identities=16% Similarity=0.082 Sum_probs=75.3
Q ss_pred EEECCEEEEEecccCCCCCCCCccEEEeccC---------CceeeCCCCCCCCcceeEEEe--CCEEEEEecCCCCCCCC
Q 016552 143 VSLSGKLILLAATTHNFNPALTRPLIFDPIC---------RTWTFGPELVTPRRWCAAGCS--RGAVYVASGIGSQFSSD 211 (387)
Q Consensus 143 ~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t---------~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 211 (387)
+...|.+|++-|. .+|+++... ..|..|| . ..-++... ++++|++-|.
T Consensus 30 ~~~~g~~y~Fkg~---------~~wr~~~~~~~~~p~~I~~~wp~Lp---~--~iDAa~~~~~~~~iyfFkG~------- 88 (207)
T 1pex_A 30 TSLRGETMIFKDR---------FFWRLHPQQVDAELFLTKSFWPELP---N--RIDAAYEHPSHDLIFIFRGR------- 88 (207)
T ss_dssp EEETTEEEEEETT---------EEEEECSSSSCCEEEEHHHHCTTSC---S--SCCEEEEETTTTEEEEEETT-------
T ss_pred EeCCCcEEEEECC---------EEEEEeCCCcCCCceehhHhccCCC---C--CccEEEEeccCCcEEEEccC-------
Confidence 3478999999873 355555433 2343333 2 12222222 5899999663
Q ss_pred CcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEECCCCceeec-ccccccCC-
Q 016552 212 VAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWDDM-REGMVRGW- 286 (387)
Q Consensus 212 ~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~~~~- 286 (387)
..++|+..+-...+ =..+..+..+... ....+|+. +|++|++.| +..+.||..+++=..- +..+...|
T Consensus 89 ---~~w~~~~~~~~~gy-Pk~I~~~GlP~~~-~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~~~d~gyPr~i~~~~~ 161 (207)
T 1pex_A 89 ---KFWALNGYDILEGY-PKKISELGLPKEV-KKISAAVHFEDTGKTLLFSG--NQVWRYDDTNHIMDKDYPRLIEEDFP 161 (207)
T ss_dssp ---EEEEESTTCCCTTC-SEESTTTTCCTTC-CCCCEEEECTTTSEEEEEET--TEEEEEETTTTEECSSCCCBHHHHST
T ss_pred ---EEEEEeCCeeccCC-ceeccccCCCCCC-ccccEEEEeCCCCEEEEEeC--CEEEEEeCcCccccCCCCccHHHcCC
Confidence 45666543222000 1223322111100 11334443 489999976 4689999876532110 00000011
Q ss_pred ----CCcEEEEeCCeEEEEeCCCCeEEEEeCCCCc
Q 016552 287 ----RGPVAAMDEEVLYGIDENSCTLSRYDEVMDD 317 (387)
Q Consensus 287 ----~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~ 317 (387)
...++...+|++|++-+ ...+.||..+..
T Consensus 162 Gip~~iDaAf~~~g~~YfFkg--~~y~rf~~~~~~ 194 (207)
T 1pex_A 162 GIGDKVDAVYEKNGYIYFFNG--PIQFEYSIWSNR 194 (207)
T ss_dssp TSCSCCSEEEEETTEEEEEET--TEEEEEETTTTE
T ss_pred CCCCCccEEEEcCCcEEEEEC--CEEEEEeCCccE
Confidence 12344456889999954 478999987764
No 296
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=81.75 E-value=54 Score=35.09 Aligned_cols=136 Identities=10% Similarity=0.028 Sum_probs=80.0
Q ss_pred CcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceeeccc-ccccCCCCcE
Q 016552 212 VAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMRE-GMVRGWRGPV 290 (387)
Q Consensus 212 ~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~-~~~~~~~~~~ 290 (387)
....+.+|+....+ .+.+...+..-. ..+.+.++|+|.+ +-+..+.+||...++--.... ..+. .....
T Consensus 862 ~~Gri~vf~v~~~k----L~lv~~~~v~g~---v~al~~~~g~Lla--~ig~~l~vy~l~~~~~L~~~~~~~~~-i~~~~ 931 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGK----LQTVAEKEVKGA---VYSMVEFNGKLLA--SINSTVRLYEWTTEKELRTECNHYNN-IMALY 931 (1158)
T ss_dssp CCEEEEEEEEETTE----EEEEEEEEESSC---EEEEEEETTEEEE--EETTEEEEEEECTTSCEEEEEEECCC-SCEEE
T ss_pred CceEEEEEEEECCE----EEEEEEEEcCCc---CEEEeeeCCEEEE--EcCCEEEEEECCCCceEEEEeecccc-EEEEE
Confidence 34578888887666 776654332211 1446678896544 444689999987664222110 0000 00112
Q ss_pred EEEeCCeEEEEeCCCC-eEEEEeCCCCceeEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccC
Q 016552 291 AAMDEEVLYGIDENSC-TLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 291 ~~~~~~~ly~~~~~~~-~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
+.+.++.+++-+-..+ .+..|+++.++-..+......+...++..+++.-++.+...++++++....
T Consensus 932 l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 932 LKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred EeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 3355777766554322 477899999988888877666655555555544445545567788776654
No 297
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=80.68 E-value=12 Score=31.70 Aligned_cols=61 Identities=13% Similarity=0.028 Sum_probs=37.1
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceee-----cccccccC------CCCcEEEE--eCCeEEEEeCCCCeEEEEeCCCC
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDD-----MREGMVRG------WRGPVAAM--DEEVLYGIDENSCTLSRYDEVMD 316 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~-----~~~~~~~~------~~~~~~~~--~~~~ly~~~~~~~~l~~yd~~~~ 316 (387)
++++|++-| ...++||..+++-.. +..+.+.. ....++.. .++++|++-+ ..-+.||..++
T Consensus 129 ~~k~yfFkG--~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--~~Ywr~d~~~~ 202 (227)
T 3lp9_A 129 GKEVYLFKG--DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--DHYARVKVTPX 202 (227)
T ss_dssp TTEEEEEET--TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--TEEEEEECCSS
T ss_pred CCEEEEEEC--CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC--CEEEEEECCcc
Confidence 589999977 468999987653211 11112210 11223333 3579999964 47899998776
No 298
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=80.58 E-value=34 Score=31.16 Aligned_cols=192 Identities=10% Similarity=-0.058 Sum_probs=87.2
Q ss_pred CCEEEEEecccCC--CCCCCCccEEEeccCCceeeCCCCC---------CCCcceeEEEeCCEEEEEecCCCCCCCCCcc
Q 016552 146 SGKLILLAATTHN--FNPALTRPLIFDPICRTWTFGPELV---------TPRRWCAAGCSRGAVYVASGIGSQFSSDVAK 214 (387)
Q Consensus 146 ~~~l~v~GG~~~~--~~~~~~~~~vyd~~t~~W~~l~~~p---------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 214 (387)
+..+|+..-.... .....+.+.+||+.|.+-..--+++ .|+ ..+....+..+|+..-. ..+
T Consensus 77 g~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG~~l~v~n~~-------~~~ 148 (373)
T 2mad_H 77 GSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNNADLLFFQFA-------AGP 148 (373)
T ss_pred CCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCCCEEEEEecC-------CCC
Confidence 4467876421110 0112356789999876433211122 111 11222234568887321 124
Q ss_pred eEEEEECCCCccccCeEEcCCCCCCCccccceEEEE-ECCEEEEEeeeCCeEEEEECCCCcee-ecc--cccccCC---C
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWD-DMR--EGMVRGW---R 287 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~-~~g~lyv~gg~~~~i~~yD~~~~~W~-~~~--~~~~~~~---~ 287 (387)
.+.++| .+++ -... -.+.+. +.... -+.+.|+....+..+..+|. +++-. ... ....... .
T Consensus 149 ~v~viD-~t~~----~~~~-~i~~~~-----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~ 216 (373)
T 2mad_H 149 AVGLVV-QGGS----SDDQ-LLSSPT-----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLT 216 (373)
T ss_pred eEEEEE-CCCC----EEeE-EcCCCc-----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceee
Confidence 789999 8777 4322 022221 11122 23344444333346777777 44322 111 0000000 0
Q ss_pred CcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEccccc---------c-ccCc---eEEEEeCCeEEEEecC--------
Q 016552 288 GPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSD---------L-LKGA---RHAAAGGGRVCAVCEN-------- 346 (387)
Q Consensus 288 ~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~---------~-~~~~---~~~~~~~g~i~v~gg~-------- 346 (387)
.+.....++++|+.. ..+.+++.|.+++.-..+...+ . .... ..+..-++++|+....
T Consensus 217 ~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~ 295 (373)
T 2mad_H 217 QPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHA 295 (373)
T ss_pred cceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccC
Confidence 111223355666665 3567888888665322222110 0 1111 2222234778887542
Q ss_pred -CCeEEEEeccCC
Q 016552 347 -GGGIVVVDVKAA 358 (387)
Q Consensus 347 -~~~i~~~d~~~~ 358 (387)
++.|.++|..+.
T Consensus 296 ~~~~V~VID~~t~ 308 (373)
T 2mad_H 296 AAKEVTSVTGLVG 308 (373)
T ss_pred CCCeEEEEECCCC
Confidence 357999999865
No 299
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=80.24 E-value=38 Score=31.62 Aligned_cols=63 Identities=10% Similarity=0.139 Sum_probs=39.0
Q ss_pred eCCeEEEEeCC---------CCeEEEEeCCCCceeEccccccccCceE-EEEeCCe--EEEEecCCCeEEEEeccCC
Q 016552 294 DEEVLYGIDEN---------SCTLSRYDEVMDDWKEVVKSDLLKGARH-AAAGGGR--VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~~~~ly~~~~~---------~~~l~~yd~~~~~W~~v~~~~~~~~~~~-~~~~~g~--i~v~gg~~~~i~~~d~~~~ 358 (387)
.++++|+.... ++.|.++|.++.+ .+...+-...+.. .+.-+|+ +|+.....+.+.++|..+.
T Consensus 329 dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 329 QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--RINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--EEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CCCEEEEEecccccccccCCCCEEEEEECCCCe--EEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 45789997531 3479999988763 4433332222322 3344555 6666556899999999943
No 300
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=79.39 E-value=6.6 Score=36.37 Aligned_cols=102 Identities=11% Similarity=0.006 Sum_probs=59.0
Q ss_pred CCEEEEEeee----CCeEEEEECCCCcee-ecccccccCCCCcEEEEe--CCeEEEEeC---------CCCeEEEEeCCC
Q 016552 252 KGKLCLVNVK----GAEGAVYDVVANTWD-DMREGMVRGWRGPVAAMD--EEVLYGIDE---------NSCTLSRYDEVM 315 (387)
Q Consensus 252 ~g~lyv~gg~----~~~i~~yD~~~~~W~-~~~~~~~~~~~~~~~~~~--~~~ly~~~~---------~~~~l~~yd~~~ 315 (387)
+.++|+.... .+.+.++|+.+++=. +++ .+.. +.+++. +..+|+... .++.|.+||+++
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~----vG~~-P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMID----GGFL-PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEE----ECSS-CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEE----CCCC-CcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 5578888764 368999999887532 222 2222 234433 456888752 235699999999
Q ss_pred CceeEcccccc-c-----cCc-eEEEEeCC-eEEEEecC-CCeEEEEeccCC
Q 016552 316 DDWKEVVKSDL-L-----KGA-RHAAAGGG-RVCAVCEN-GGGIVVVDVKAA 358 (387)
Q Consensus 316 ~~W~~v~~~~~-~-----~~~-~~~~~~~g-~i~v~gg~-~~~i~~~d~~~~ 358 (387)
.+=..--..+. . ..+ ...+.-+| ++|+.... .+.+.++|..+.
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 86433211111 0 122 22333455 46776543 678999999865
No 301
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=79.33 E-value=19 Score=33.54 Aligned_cols=104 Identities=11% Similarity=0.044 Sum_probs=54.4
Q ss_pred CEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceeEcccccccc---
Q 016552 253 GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLK--- 328 (387)
Q Consensus 253 g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~--- 328 (387)
+.+++.++.+..+.++|..++.-.... ........+++.. +|+.++.+..++.|..||++...-..+.......
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~~~~~~--~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETVKVCAT--LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDH 239 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSEEEEEE--ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTS
T ss_pred CCEEEEEECCCeEEEEEcCCCcceeec--cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCC
Confidence 567777777778999999877321111 1101112233332 5666667777889999999843322332221111
Q ss_pred --CceEEEEeCCeEEEEe---cC-----CCeEEEEeccCC
Q 016552 329 --GARHAAAGGGRVCAVC---EN-----GGGIVVVDVKAA 358 (387)
Q Consensus 329 --~~~~~~~~~g~i~v~g---g~-----~~~i~~~d~~~~ 358 (387)
....+.-..+..++++ +. ...+.++|+.+.
T Consensus 240 ~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 240 PVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 1122233344455533 21 135888888754
No 302
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=79.14 E-value=5.6 Score=37.40 Aligned_cols=103 Identities=11% Similarity=0.007 Sum_probs=57.7
Q ss_pred CCEEEEEeeeC----CeEEEEECCCCceeecccccccCCCCcEEEE--eCCeEEEEeC---------CCCeEEEEeCCCC
Q 016552 252 KGKLCLVNVKG----AEGAVYDVVANTWDDMREGMVRGWRGPVAAM--DEEVLYGIDE---------NSCTLSRYDEVMD 316 (387)
Q Consensus 252 ~g~lyv~gg~~----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~--~~~~ly~~~~---------~~~~l~~yd~~~~ 316 (387)
..++|+..... +.+.++|+.+++=. .. .+.+.. +.+++ .++.||+... .++.|.++|+++.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv--~~-I~vG~~-Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRIL--GM-TDGGFL-PHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEE--EE-EEECSS-CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEE--EE-EECCCC-CceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 34678876543 58999999887532 21 222222 24443 3557888752 2457999999987
Q ss_pred ceeEccccc---cc---cCc-eEEEEeCC-eEEEEecC-CCeEEEEeccCC
Q 016552 317 DWKEVVKSD---LL---KGA-RHAAAGGG-RVCAVCEN-GGGIVVVDVKAA 358 (387)
Q Consensus 317 ~W~~v~~~~---~~---~~~-~~~~~~~g-~i~v~gg~-~~~i~~~d~~~~ 358 (387)
+=..--..+ .. ..+ ...+.-+| ++|+.... .+.+.++|..+.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 543211111 10 112 22333344 56666543 678999999864
No 303
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=79.07 E-value=38 Score=30.83 Aligned_cols=146 Identities=14% Similarity=0.038 Sum_probs=77.1
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeE-EcCCCCCCCccccceEEEEECCEEEEEe------------ee
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWE-KTGELKDGRFSREAIDAVGWKGKLCLVN------------VK 261 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~-~~~~~p~~~~~~~~~~~~~~~g~lyv~g------------g~ 261 (387)
++.+++.|+.+. ++.++|..+++ -. .+..-...... -.+.+..-+|++.+.+ ..
T Consensus 192 ~~~~LaSgS~D~--------TIkIWDl~TGk----~l~tL~g~~~~v~~-v~~vafSpdG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 192 MQEALLGTTIMN--------NIVIWNLKTGQ----LLKKMHIDDSYQAS-VCHKAYSEMGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp STTEEEEEETTS--------EEEEEETTTCC----EEEEEECCC---CC-CEEEEEEETTEEEEEEC------------C
T ss_pred CCceEEEecCCC--------cEEEEECCCCc----EEEEEcCCCcceee-eEEEEECCCCCEEEEeccCCCcceeeccCC
Confidence 457777777655 88999999987 33 33211000000 0011233467765432 22
Q ss_pred CCeEEEEECCCCceeecc-cccccCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCceeEcccccccc-C--ceEEEEe
Q 016552 262 GAEGAVYDVVANTWDDMR-EGMVRGWRGPVAA-MDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLK-G--ARHAAAG 336 (387)
Q Consensus 262 ~~~i~~yD~~~~~W~~~~-~~~~~~~~~~~~~-~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~-~--~~~~~~~ 336 (387)
+..+..+|+.++.-..+- ...+.+..+.... -.++.+.+-+..++.|..||.++++-... +.... . ......-
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~t--L~gH~~~vvs~vafSP 336 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTAL--LPPVSDQHWSFVKWSG 336 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEE--ECCC--CCCCEEEECS
T ss_pred CcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEE--ecCCCCCeEEEEEECC
Confidence 256777888876532211 0012222211111 01133445555678999999998864432 22211 1 1223445
Q ss_pred CCeEEEEecCCCeEEEEec
Q 016552 337 GGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 337 ~g~i~v~gg~~~~i~~~d~ 355 (387)
+|+.++.|+....|.+||.
T Consensus 337 DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 337 TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SSSEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEECCCcEEEecC
Confidence 7888888888888999885
No 304
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=78.38 E-value=46 Score=31.39 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=38.7
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeec-ccccccCC-----CCcEEEEeCCeEEEEeCCCCeEEEEeCCCCce
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDM-REGMVRGW-----RGPVAAMDEEVLYGIDENSCTLSRYDEVMDDW 318 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~~~~-----~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W 318 (387)
++++|++-| +..+.||..+++-..- +..+...+ ...++...+|++|++-+ ...+.||..+..=
T Consensus 367 ~~k~yfFkG--~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFFkg--~~ywr~d~~~~~v 435 (450)
T 1su3_A 367 TGKTYFFVA--NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHG--TRQYKFDPKTKRI 435 (450)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEEET--TEEEEEETTTTEE
T ss_pred CCeEEEEeC--CEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCeEEEEeC--CEEEEEECCcceE
Confidence 689999976 4799999875432210 00000111 12344556889999964 4789999877643
No 305
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=78.27 E-value=49 Score=31.72 Aligned_cols=103 Identities=8% Similarity=-0.059 Sum_probs=55.7
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc--EE--EEe-CC-eEEEEeCCCCeEEEEeCCCCceeEccccc
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP--VA--AMD-EE-VLYGIDENSCTLSRYDEVMDDWKEVVKSD 325 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~--~~--~~~-~~-~ly~~~~~~~~l~~yd~~~~~W~~v~~~~ 325 (387)
.+...+.|+.+..+..+|+.+.. .+.....+.... ++ +.. ++ .+++.++.++.+.+||..+.+-..... .
T Consensus 276 ~~~~lasgs~DgtV~lWD~~~~~---~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~ 351 (524)
T 2j04_B 276 SPTTVVCGFKNGFVAEFDLTDPE---VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-S 351 (524)
T ss_dssp SSSEEEEEETTSEEEEEETTBCS---SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-E
T ss_pred CCCeEEEEeCCCEEEEEECCCCC---CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-c
Confidence 34444556666789999998652 110001111122 22 112 34 677777778999999987642111000 0
Q ss_pred ccc-C--ceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 326 LLK-G--ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 326 ~~~-~--~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
... . ......-+++.++.++....+-++|+.+.
T Consensus 352 ~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~ 387 (524)
T 2j04_B 352 RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA 387 (524)
T ss_dssp ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT
T ss_pred ccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc
Confidence 111 1 12233345777777777778889988754
No 306
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=77.43 E-value=42 Score=30.50 Aligned_cols=203 Identities=12% Similarity=0.082 Sum_probs=101.3
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCC---CC--------------CCcceeEEEe---CCEEEEEecCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPEL---VT--------------PRRWCAAGCS---RGAVYVASGIG 205 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~---p~--------------~r~~~~~~~~---~~~iyv~GG~~ 205 (387)
.+.||+.+. . ..+++.+-...+|+.+... |. ....+..+.. .+.||+....
T Consensus 128 ~~~l~~g~~-~-------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~- 198 (394)
T 3b7f_A 128 PGTWYAGTS-P-------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS- 198 (394)
T ss_dssp TTCEEEEEE-T-------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-
T ss_pred CCEEEEEec-C-------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-
Confidence 456766542 1 2477777788899987532 11 1112223322 3568876432
Q ss_pred CCCCCCCcceEEEEECCCCccccCeEEcCCC------CCCC--ccccceEEEEEC----CEEEEEeeeCCeEEEEECCCC
Q 016552 206 SQFSSDVAKSVEKWDLMNGEKNSRWEKTGEL------KDGR--FSREAIDAVGWK----GKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 206 ~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~------p~~~--~~~~~~~~~~~~----g~lyv~gg~~~~i~~yD~~~~ 273 (387)
..+...+-...+ |+.+..- |... +... ...+..+ +.||+... ..++.++-...
T Consensus 199 --------ggl~~s~DgG~t----W~~~~~~~~~~~~p~~~~~~g~~-~~~i~~~~~~~~~l~vg~~--~gl~~s~D~G~ 263 (394)
T 3b7f_A 199 --------GGVFESTDAGTD----WKPLNRGCAANFLPDPNVEFGHD-PHCVVQHPAAPDILYQQNH--CGIYRMDRREG 263 (394)
T ss_dssp --------BEEEEESSTTSS----CEECCTTCCCTTSSSSSSSSCBC-EEEEEECSSSTTEEEEEET--TEEEEEETTTT
T ss_pred --------CCEEEECCCCCC----ceECCCCccccccCCCccccCcc-eeEEEECCCCCCEEEEEcC--CeEEEeCCCCC
Confidence 124444445556 9987531 1110 0111 2233332 67777432 35888888888
Q ss_pred ceeecccccccC--CCCcEEEE---eCCeEEEEeCC----------C--CeEEEEeCCCCceeEccc-ccccc-----Cc
Q 016552 274 TWDDMREGMVRG--WRGPVAAM---DEEVLYGIDEN----------S--CTLSRYDEVMDDWKEVVK-SDLLK-----GA 330 (387)
Q Consensus 274 ~W~~~~~~~~~~--~~~~~~~~---~~~~ly~~~~~----------~--~~l~~yd~~~~~W~~v~~-~~~~~-----~~ 330 (387)
+|+.+...++.. .....+++ ..+.||+.... . ..++.-.-...+|+.+.. +|... ..
T Consensus 264 tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~ 343 (394)
T 3b7f_A 264 VWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKR 343 (394)
T ss_dssp EEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCT
T ss_pred cceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEE
Confidence 999886533331 11223444 34678886421 1 234444444579998863 33211 01
Q ss_pred eEEEE--eC-CeEEEEecCCCeEEEEeccCCCCCCceEE---eCCCCceeEEEE
Q 016552 331 RHAAA--GG-GRVCAVCENGGGIVVVDVKAAAAPTIFVV---DTPLGFEALSVH 378 (387)
Q Consensus 331 ~~~~~--~~-g~i~v~gg~~~~i~~~d~~~~~~~~~W~~---~~p~~~~~~~~~ 378 (387)
..++. .+ +.||+ ++....++.-+-.. +.|+. .+|. ...+.++
T Consensus 344 ~~~~~~p~~~~~l~~-g~~~g~l~~S~D~G----~tW~~~~~~lp~-~~~v~~~ 391 (394)
T 3b7f_A 344 QAMTADAHAPVGVYF-GTTGGEIWASADEG----EHWQCIASHLPH-IYAVQSA 391 (394)
T ss_dssp BSEEECCSSSCCEEE-ECTTSCEEEESSTT----SBCEEEECSCSC-EEEEEEE
T ss_pred EEEEECCCCCCEEEE-EeCCCeEEEECCCC----CCceEcccCCCC-eeEEEEe
Confidence 22222 23 34664 44444566544443 48995 3444 3455555
No 307
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=76.71 E-value=44 Score=30.35 Aligned_cols=176 Identities=11% Similarity=0.061 Sum_probs=86.9
Q ss_pred CccEEEeccCCceeeCCCCCCCCcceeEE----EeCCE---E-EEEecCCCCCCCCCcceEEEE--ECCCCccccCeEEc
Q 016552 164 TRPLIFDPICRTWTFGPELVTPRRWCAAG----CSRGA---V-YVASGIGSQFSSDVAKSVEKW--DLMNGEKNSRWEKT 233 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~l~~~p~~r~~~~~~----~~~~~---i-yv~GG~~~~~~~~~~~~v~~y--d~~~~~~~~~W~~~ 233 (387)
..+++||..-+.-..++. .|.+-.-. .++++ + |+.- .. .-.+.+.+| |+.+++ +..+
T Consensus 50 ~gL~Vydl~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~-R~-----~~~n~l~vf~iDp~~~~----l~~i 116 (355)
T 3amr_A 50 SGLVVYSLDGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASN-RS-----EGKNTIEIYAIDGKNGT----LQSM 116 (355)
T ss_dssp TEEEEEETTSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEE-CS-----TTCCEEEEEEECTTTCC----EEEC
T ss_pred CCEEEEcCCCcEEEEccC---CCcccEEEecccccCCceEeEEEEeC-CC-----CCCCeEEEEEECCCCCc----eeec
Confidence 358999996666666543 33221111 12333 1 2221 11 003477788 778888 9999
Q ss_pred CCC--C--CCCccccceEEEEE----CCEEEEEe-eeCCeEEEEEC---CCCcee--ecccccccCCCCcEEEEe--CCe
Q 016552 234 GEL--K--DGRFSREAIDAVGW----KGKLCLVN-VKGAEGAVYDV---VANTWD--DMREGMVRGWRGPVAAMD--EEV 297 (387)
Q Consensus 234 ~~~--p--~~~~~~~~~~~~~~----~g~lyv~g-g~~~~i~~yD~---~~~~W~--~~~~~~~~~~~~~~~~~~--~~~ 297 (387)
... | ...... ...+.+ .+++|++- +....++.|++ ..++.+ .+.. +..+-..-.+++. .++
T Consensus 117 ~~~~~pv~t~~~~p--yGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~-f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 117 TDPDHPIATAINEV--YGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA-FKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp SCTTSCEECCCSSC--CCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE-EECSSCEEEEEEETTTTE
T ss_pred cccccCcCCCCCCe--eEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE-ecCCCCcceEEEcCCCCe
Confidence 653 4 221111 223332 36655542 22246777766 333332 2222 2222222233343 368
Q ss_pred EEEEeCCCCeEEEEeCC--CC-ceeEcccc--cccc-CceEEEEe-C----CeEEEEecCCCeEEEEecc
Q 016552 298 LYGIDENSCTLSRYDEV--MD-DWKEVVKS--DLLK-GARHAAAG-G----GRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 298 ly~~~~~~~~l~~yd~~--~~-~W~~v~~~--~~~~-~~~~~~~~-~----g~i~v~gg~~~~i~~~d~~ 356 (387)
||+-... ..||.||.+ +. +-+.+... .... ....++.+ + +.|++..-+++...+||..
T Consensus 194 Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 194 LYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 8887765 459999954 31 23444322 2222 33444443 2 3455555456788999886
No 308
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=76.64 E-value=44 Score=30.28 Aligned_cols=64 Identities=14% Similarity=0.116 Sum_probs=36.7
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE-CCE-EEEEeeeCCeEEEEECCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW-KGK-LCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~-~g~-lyv~gg~~~~i~~yD~~~ 272 (387)
++++++.||.+. ++.++|..++.. =........+ ....+.. ++. +.+.++.+..+.+||..+
T Consensus 155 d~~~las~s~D~--------tv~~Wd~~~~~~---~~~~~~~~~~-----v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 155 AEQVIASVGDDC--------TLIIWRLTDEGP---ILAGYPLSSP-----GISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEEEEETTS--------EEEEEEEETTEE---EEEEEECSSC-----EEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEEECCC--------eEEEEECCCCce---eeeecCCCCC-----cEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 578888888755 788888876651 1111111111 0222222 444 455555667899999987
Q ss_pred Cc
Q 016552 273 NT 274 (387)
Q Consensus 273 ~~ 274 (387)
++
T Consensus 219 ~~ 220 (393)
T 4gq1_A 219 NL 220 (393)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 309
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=75.93 E-value=38 Score=29.17 Aligned_cols=146 Identities=5% Similarity=0.016 Sum_probs=78.8
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEE--CCEEEEEeeeCCeEEEEECCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++.+|++.... ..+..+|+.... +..++--. +. + ...+.+ +|.+++.......+.+|+...
T Consensus 38 ~~~L~aV~d~~--------~~I~~ld~~g~v----~~~i~l~g---~~-D-~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 38 SNTLFSTINKP--------AAIVEMTTNGDL----IRTIPLDF---VK-D-LETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp TTEEEEEEETT--------EEEEEEETTCCE----EEEEECSS---CS-S-EEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCEEEEEECCC--------CeEEEEeCCCCE----EEEEecCC---CC-C-hHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 46899876542 368889998555 77765211 11 1 223333 556555543446788887665
Q ss_pred Cc--eeecccccc----cCCCC-cEEEE--eCCeEEEEeCCCC-eEEEEeC--CCCceeEccc-----cccccCceEEEE
Q 016552 273 NT--WDDMREGMV----RGWRG-PVAAM--DEEVLYGIDENSC-TLSRYDE--VMDDWKEVVK-----SDLLKGARHAAA 335 (387)
Q Consensus 273 ~~--W~~~~~~~~----~~~~~-~~~~~--~~~~ly~~~~~~~-~l~~yd~--~~~~W~~v~~-----~~~~~~~~~~~~ 335 (387)
+. |..-....+ ....+ -+++. .+++||+...... .|+.|+- .++.-..+.. ........++..
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 54 421111111 11111 24454 3558999876554 6888882 2211111111 011222333333
Q ss_pred --eCCeEEEEecCCCeEEEEeccC
Q 016552 336 --GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 336 --~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
..|.+|++...+..++++|...
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTC
T ss_pred cCCCCeEEEEECCCCeEEEEcCCC
Confidence 3588999988899999999874
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=74.90 E-value=49 Score=30.02 Aligned_cols=179 Identities=10% Similarity=-0.000 Sum_probs=87.6
Q ss_pred CCccEEEeccC--CceeeCCCCC---CCC--cceeEEE-e--CC--EEEEEecCCCCCCCCCcceEEEE--ECCCCcccc
Q 016552 163 LTRPLIFDPIC--RTWTFGPELV---TPR--RWCAAGC-S--RG--AVYVASGIGSQFSSDVAKSVEKW--DLMNGEKNS 228 (387)
Q Consensus 163 ~~~~~vyd~~t--~~W~~l~~~p---~~r--~~~~~~~-~--~~--~iyv~GG~~~~~~~~~~~~v~~y--d~~~~~~~~ 228 (387)
...+++||+.+ .+-+++.... .+. .-+.... . ++ +|||+-... .-..+++| |+..+.
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~------~~s~ielf~~d~~~~~--- 152 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG------SSSTVEVFKFQEEEKS--- 152 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST------TCCEEEEEEEETTTTE---
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC------CCCeEEEEEEECCCCE---
Confidence 44688999873 4555554221 111 1222222 2 34 588875431 12355555 454454
Q ss_pred CeEEcCCCCCCCccccceEEEEECCEEEEEeee-----------------CCeEEEEECCCCceeecccccccCCCCcEE
Q 016552 229 RWEKTGELKDGRFSREAIDAVGWKGKLCLVNVK-----------------GAEGAVYDVVANTWDDMREGMVRGWRGPVA 291 (387)
Q Consensus 229 ~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~-----------------~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~ 291 (387)
...+......+..+.+-..+.-+|.+|+-+.. ...++.||+. +.+.+...+.. ..++
T Consensus 153 -~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~---pNGi 226 (355)
T 3sre_A 153 -LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDF---ANGI 226 (355)
T ss_dssp -EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESS---EEEE
T ss_pred -EEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcc---cCcc
Confidence 44443333233333334456668999886431 1457788874 44444322211 1234
Q ss_pred EEe--CCeEEEEeCCCCeEEEEeCCCC-ceeEccccccccCceE-EEEe-CCeEEEEec-CCCeEEEEecc
Q 016552 292 AMD--EEVLYGIDENSCTLSRYDEVMD-DWKEVVKSDLLKGARH-AAAG-GGRVCAVCE-NGGGIVVVDVK 356 (387)
Q Consensus 292 ~~~--~~~ly~~~~~~~~l~~yd~~~~-~W~~v~~~~~~~~~~~-~~~~-~g~i~v~gg-~~~~i~~~d~~ 356 (387)
+.. +..||+.+...+.|++||.+.+ +............+-. .+-. +|.+++... ++..+..||+.
T Consensus 227 a~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 227 NISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred eECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 443 4479998866788999998643 3322111111111222 2334 488998543 33333334433
No 311
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=74.64 E-value=19 Score=34.48 Aligned_cols=105 Identities=10% Similarity=-0.011 Sum_probs=64.5
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcE-EEE---------eCCeEEEEeCCCC------eEEEEeCCC
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPV-AAM---------DEEVLYGIDENSC------TLSRYDEVM 315 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~-~~~---------~~~~ly~~~~~~~------~l~~yd~~~ 315 (387)
++.||++......+.+.|++++.-+.+..........+. +++ .++.||+.+...+ .++.++.+.
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~ 230 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA 230 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC
Confidence 367999876556799999999988876542111222233 333 2445998875432 377887655
Q ss_pred -CceeE-c--cccccccCceEEEEe--CCeEEEEecCCCeEEEEecc
Q 016552 316 -DDWKE-V--VKSDLLKGARHAAAG--GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 316 -~~W~~-v--~~~~~~~~~~~~~~~--~g~i~v~gg~~~~i~~~d~~ 356 (387)
+.|.. . ...+....+..++.. ++.||+.-.....++.||+.
T Consensus 231 ~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 231 DGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp TSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 45531 0 111223344444443 57899887777889999997
No 312
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=73.89 E-value=15 Score=37.24 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=0.0
Q ss_pred CceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECC
Q 016552 174 RTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKG 253 (387)
Q Consensus 174 ~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g 253 (387)
++|+.+...|..........-++.+|+.+ .. .+.+-.=.-.+ |+.+.....+...........-++
T Consensus 556 ~tW~~~~~~~~~~~i~~~~~~~~~~~a~~--~g--------~v~~S~DgG~t----W~~~~~~~~p~~~~~i~~~~~~~g 621 (737)
T 2cn3_A 556 NSWKVCTNLGMGAVVASDRVNGKKFYAFY--NG--------KFYISTDGGLT----FTDTKAPQLPKSVNKIKAVPGKEG 621 (737)
T ss_dssp SSCEECBTCCTTCEEEECSSCTTCEEEEE--TT--------EEEEESSTTSB----CEECCCSSCCSCCSEEEEETTEEE
T ss_pred CCCccCCCCCCCceEEEEecCCCEEEEec--CC--------EEEEECCCCcC----cccccCCCCCCccceEEEEeCCCC
Q ss_pred EEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEeCC---eEEEEe--CCCCeEEEEeCCCCceeEcccccccc
Q 016552 254 KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEE---VLYGID--ENSCTLSRYDEVMDDWKEVVKSDLLK 328 (387)
Q Consensus 254 ~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~---~ly~~~--~~~~~l~~yd~~~~~W~~v~~~~~~~ 328 (387)
.+|+.+..+ .++.-+-.-.+|+.+................++ .||+++ +....|+.-+-...+|+.+.......
T Consensus 622 ~l~~~~~~g-~l~~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~gl~~S~D~G~tW~~~~~~~~~~ 700 (737)
T 2cn3_A 622 HVWLAAREG-GLWRSTDGGYTFEKLSNVDTAHVVGFGKAAPGQDYMAIYITGKIDNVLGFFRSDDAGKTWVRINDDEHGY 700 (737)
T ss_dssp EEEEECBTT-CEEEESSTTSSCEECTTCSEEEEEEEECCCTTCSSCEEEEEEEETTEEEEEEESSTTSSCEECSBTTBCC
T ss_pred EEEEEeCCC-cEEEEeCCCcccEECcCCCccceEEEeecCCCCCCcEEEEEEecCCcceEEEeCCCCCCCEeccCCcccc
Q ss_pred CceEEEEe-----CCeEEEEecCCCeEEEEecc
Q 016552 329 GARHAAAG-----GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 329 ~~~~~~~~-----~g~i~v~gg~~~~i~~~d~~ 356 (387)
........ .++||+. ..+..++..|+.
T Consensus 701 ~~~~~~i~~d~~~~g~v~~~-t~g~g~~~~~~~ 732 (737)
T 2cn3_A 701 GAVDTAITGDPRVYGRVYIA-TNGRGIVYGEPA 732 (737)
T ss_dssp SCCCSCEEEETTEEEEEEEE-CBSSCEEEEEEC
T ss_pred CcccceecCCCCcCceEEEE-eCCCceEEEecC
No 313
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=73.12 E-value=41 Score=28.24 Aligned_cols=64 Identities=19% Similarity=0.102 Sum_probs=36.6
Q ss_pred EEEECCEEEEEeeeCCeEEEEECCCC-cee-----eccc--ccccC--CC-CcEEEEe--CCeEEEEeCCCCeEEEEeCC
Q 016552 248 AVGWKGKLCLVNVKGAEGAVYDVVAN-TWD-----DMRE--GMVRG--WR-GPVAAMD--EEVLYGIDENSCTLSRYDEV 314 (387)
Q Consensus 248 ~~~~~g~lyv~gg~~~~i~~yD~~~~-~W~-----~~~~--~~~~~--~~-~~~~~~~--~~~ly~~~~~~~~l~~yd~~ 314 (387)
+...+|++|++-| +..++||..++ +=. .+.. +++.. .. ..++... ++++|++-+ ...+.||.+
T Consensus 68 A~~~~~~~yfFkG--~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~ 143 (219)
T 1hxn_A 68 AFSWEDKLYLIQD--TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--RRLWWLDLK 143 (219)
T ss_dssp EEEETTEEEEEET--TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET--TEEEEEEGG
T ss_pred EEEECCcEEEecC--CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC--CEEEEEeCC
Confidence 3345899999976 46899987532 110 1110 12222 11 2233332 579999964 478999976
Q ss_pred C
Q 016552 315 M 315 (387)
Q Consensus 315 ~ 315 (387)
+
T Consensus 144 ~ 144 (219)
T 1hxn_A 144 S 144 (219)
T ss_dssp G
T ss_pred C
Confidence 5
No 314
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=73.10 E-value=73 Score=31.14 Aligned_cols=144 Identities=8% Similarity=-0.081 Sum_probs=76.2
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcC-CCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG-ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~-~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~ 273 (387)
+|+..+.++.+. .+.+||... . +.... .++.+.... ...+..-||++.+.++.+..+.+||..++
T Consensus 96 dG~~LAs~s~dg--------~V~iwd~~~-~----l~~l~~~~~~~~~sv-~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 96 IDDWMAVLSNNG--------NVSVFKDNK-M----LTNLDSKGNLSSRTY-HCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp SSSCEEEEETTS--------CEEEEETTE-E----EEECCCSSCSTTTCE-EEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred CCCEEEEEeCCC--------cEEEEeCCc-e----eeeccCCCccccccE-EEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 566666665544 567777433 3 55443 121111110 01222358888888888889999999886
Q ss_pred c--------eeecccccccCC--CCcEEEEeCCeEEEEeCCCCeEEEEeCCCCc----eeEccccccccCc-eEEEEeCC
Q 016552 274 T--------WDDMREGMVRGW--RGPVAAMDEEVLYGIDENSCTLSRYDEVMDD----WKEVVKSDLLKGA-RHAAAGGG 338 (387)
Q Consensus 274 ~--------W~~~~~~~~~~~--~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~----W~~v~~~~~~~~~-~~~~~~~g 338 (387)
. ..++.... .+. ...+++...+. ++.++.++.+..||..++. |..+.. ..+.. ..++-. |
T Consensus 162 ~l~~~~~i~l~ti~~~~-~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~--~h~~~V~svaFs-g 236 (588)
T 2j04_A 162 SENTPEFYFESSIRLSD-AGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQN--ASRRKITDLKIV-D 236 (588)
T ss_dssp TTTCCCCEEEEEEECSC-TTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEEC--CCSSCCCCEEEE-T
T ss_pred ccccccceeeeeeeccc-ccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecc--cccCcEEEEEEE-C
Confidence 4 22222111 111 12344444444 5666667899999998765 223321 12211 112222 4
Q ss_pred eEEEEecCCCeEEEEeccCC
Q 016552 339 RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 339 ~i~v~gg~~~~i~~~d~~~~ 358 (387)
..++.++ .+.|.+||+.+.
T Consensus 237 ~~LASa~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 237 YKVVLTC-PGYVHKIDLKNY 255 (588)
T ss_dssp TEEEEEC-SSEEEEEETTTT
T ss_pred CEEEEEe-CCeEEEEECCCC
Confidence 5555544 468888888754
No 315
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=72.60 E-value=8.2 Score=32.77 Aligned_cols=108 Identities=16% Similarity=0.080 Sum_probs=56.6
Q ss_pred EECCEEEEEecccCCCCCCCCccEEEe--cc-------------CCceeeCCCCCCCCcceeEEEe--CCEEEEEecCCC
Q 016552 144 SLSGKLILLAATTHNFNPALTRPLIFD--PI-------------CRTWTFGPELVTPRRWCAAGCS--RGAVYVASGIGS 206 (387)
Q Consensus 144 ~~~~~l~v~GG~~~~~~~~~~~~~vyd--~~-------------t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 206 (387)
..++++|++-| +.+|+|+ +. +..|.-||....+...-++... ++++|++-|.
T Consensus 70 ~~~g~~~fFKg---------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG~-- 138 (227)
T 3lp9_A 70 TENNEAFIFYE---------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKGD-- 138 (227)
T ss_dssp CSTTEEEEEET---------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEETT--
T ss_pred CCCCEEEEEeC---------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEECC--
Confidence 36789999987 3567777 22 2334444321112222222222 5899999763
Q ss_pred CCCCCCcceEEEEECCCCccccC-eEEcC-CCCCCC---ccccceEEEEE---CCEEEEEeeeCCeEEEEECCCC
Q 016552 207 QFSSDVAKSVEKWDLMNGEKNSR-WEKTG-ELKDGR---FSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 207 ~~~~~~~~~v~~yd~~~~~~~~~-W~~~~-~~p~~~---~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~~~ 273 (387)
..++||..+++.... =..+. .+|... +. ....+|.. +|++|++-| ..-+.||..++
T Consensus 139 --------~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p-~~iDAA~~~~~~g~~YfFkg--~~Ywr~d~~~~ 202 (227)
T 3lp9_A 139 --------QYARIDYGSNSMVNKEIKSISSGYPCFRNTIFE-SGADAAFASHKTNEVYFFKD--DHYARVKVTPX 202 (227)
T ss_dssp --------EEEEEETTTTEESSSSCEEHHHHCGGGTTSGGG-GCCSEEEECSSTTEEEEEET--TEEEEEECCSS
T ss_pred --------EEEEEeCCCccccCCCCeEHHHCCCCccccccC-CCccEEEEcCCCceEEEEEC--CEEEEEECCcc
Confidence 568888765540000 01111 122100 00 12334443 589999977 46899998876
No 316
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=72.32 E-value=39 Score=27.70 Aligned_cols=142 Identities=14% Similarity=0.030 Sum_probs=74.5
Q ss_pred EEEECCEEEEEecccCCCCCCCCccEEEeccC-----------CceeeCCCCCCCCcceeEEEe--CCEEEEEecCCCCC
Q 016552 142 LVSLSGKLILLAATTHNFNPALTRPLIFDPIC-----------RTWTFGPELVTPRRWCAAGCS--RGAVYVASGIGSQF 208 (387)
Q Consensus 142 ~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t-----------~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 208 (387)
++..+|++|++-|. .+|+++... ..|..|| .. .-++... ++++|++-|.
T Consensus 12 i~~~~g~~yfFkg~---------~~Wr~~~~~~~~~~~p~~Is~~w~glP---~~--IDAa~~~~~~~~~yfFkG~---- 73 (195)
T 1itv_A 12 IAEIGNQLYLFKDG---------KYWRFSEGRGSRPQGPFLIADKWPALP---RK--LDSVFEEPLSKKLFFFSGR---- 73 (195)
T ss_dssp EEEETTEEEEEETT---------EEEEECCSSSCCCEEEEEHHHHCTTSC---SS--CSEEEECTTTCCEEEEETT----
T ss_pred EEEeCCEEEEEECC---------EEEEEECCccccCCCcEEhhhccCCCC---CC--ccEEEEECCCCeEEEEeCC----
Confidence 34578999999872 456666543 2333333 21 1122222 6789998763
Q ss_pred CCCCcceEEEEECCCCccccCeEEcC--CCCCCCccccceEEEE--ECCEEEEEeeeCCeEEEEECCCCceeec-ccccc
Q 016552 209 SSDVAKSVEKWDLMNGEKNSRWEKTG--ELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDM-REGMV 283 (387)
Q Consensus 209 ~~~~~~~v~~yd~~~~~~~~~W~~~~--~~p~~~~~~~~~~~~~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~ 283 (387)
..++|+..+-.. =..+. .+|.... ...+|+ .+|++|++.| +..+.||..+++=..- +..+.
T Consensus 74 ------~yw~~~~~~~~~---Pk~i~~~G~p~~~~---~iDAA~~~~~g~~yfFkg--~~ywr~d~~~~~~~~gyPr~i~ 139 (195)
T 1itv_A 74 ------QVWVYTGASVLG---PRRLDKLGLGADVA---QVTGALRSGRGKMLLFSG--RRLWRFDVKAQMVDPRSASEVD 139 (195)
T ss_dssp ------EEEEEETTEEEE---EEEGGGGTCCTTCC---CCCEEEECSTTEEEEEET--TEEEEEETTTTEECGGGCEEHH
T ss_pred ------EEEEEcCCccCC---CEEeeecccCCCcc---ceeEEEEcCCCeEEEEeC--CEEEEEeCCcccccCCCccChh
Confidence 446665432110 01111 1232101 122333 3689999876 4689999877542110 00000
Q ss_pred cCC-----CCcEEEEeCCeEEEEeCCCCeEEEEeCCCCc
Q 016552 284 RGW-----RGPVAAMDEEVLYGIDENSCTLSRYDEVMDD 317 (387)
Q Consensus 284 ~~~-----~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~ 317 (387)
..| ...++...+|.+|++-+ ...+.||..+..
T Consensus 140 ~~w~Gvp~~idaa~~~~g~~Yffkg--~~y~~~~~~~~~ 176 (195)
T 1itv_A 140 RMFPGVPLDTHDVFQFREKAYFCQD--RFYWRVSSRSEL 176 (195)
T ss_dssp HHSTTSCSSCSEEEEETTEEEEEET--TEEEEEECCTTC
T ss_pred hcCCCCCCCCCEEEEeCCeEEEEeC--CEEEEEECCccE
Confidence 111 12345555789999964 478889987664
No 317
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=71.62 E-value=60 Score=29.56 Aligned_cols=145 Identities=12% Similarity=0.051 Sum_probs=75.6
Q ss_pred EEECCEEEEEecccCCCCCCCCccEEEecc---------CCceeeCCCCCCCCcceeEEE--eCCEEEEEecCCCCCCCC
Q 016552 143 VSLSGKLILLAATTHNFNPALTRPLIFDPI---------CRTWTFGPELVTPRRWCAAGC--SRGAVYVASGIGSQFSSD 211 (387)
Q Consensus 143 ~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~---------t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~ 211 (387)
...++++|++-|. .+|+++.. ...|..|| . ..-++.. .++++|++-|.
T Consensus 187 ~~~~g~~~fFkg~---------~~Wr~~~~~~~~~p~~I~~~wpgLP---~--~iDAa~~~~~~g~~~fFkg~------- 245 (365)
T 3ba0_A 187 TTVGNKIFFFKDR---------FFWLKVSERPKTSVNLISSLWPTLP---S--GIEAAYEIEARNQVFLFKDD------- 245 (365)
T ss_dssp EEETTEEEEEETT---------EEEECCSSCCCCCEEEHHHHCSSCC---S--SCCEEEEEGGGTEEEEEETT-------
T ss_pred EEcCCeEEEEeCC---------EEEEEcCCCccCCccchhhhccCCC---C--CccEEEEecCCCEEEEEeCC-------
Confidence 4468999999772 34554433 23344443 1 1112222 27899998663
Q ss_pred CcceEEEEECCCCccccCe-EEcCC--CCCCCccccceEEEE-E--CCEEEEEeeeCCeEEEEECCCCceeec-cccccc
Q 016552 212 VAKSVEKWDLMNGEKNSRW-EKTGE--LKDGRFSREAIDAVG-W--KGKLCLVNVKGAEGAVYDVVANTWDDM-REGMVR 284 (387)
Q Consensus 212 ~~~~v~~yd~~~~~~~~~W-~~~~~--~p~~~~~~~~~~~~~-~--~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~~ 284 (387)
..++|+...-... + ..+.. +|.... ...+++ . ++++|++-| +..+.||..+++-..- +..+..
T Consensus 246 ---~yWr~~~~~~~~g--yPk~I~~~GlP~~~~---~IDAA~~~~~~~~~yfFkG--~~yw~yd~~~~~v~~gyPk~I~~ 315 (365)
T 3ba0_A 246 ---KYWLISNLRPEPN--YPKSIHSFGFPNFVK---KIDAAVFNPRFYRTYFFVD--NQYWRYDERRQMMDPGYPKLITK 315 (365)
T ss_dssp ---EEEECSTTSCTTT--CSEETTTTTCCTTCC---CCCEEEEETTTTEEEEEET--TEEEEEETTTTEECSSCCCCHHH
T ss_pred ---EEEEEcCCcccCC--CCceeeeccCCCCCC---CcCEEEEeCCCCEEEEEEC--CEEEEEeCCcceecCCCCcchhh
Confidence 4455654322211 2 13332 232100 122333 3 589999976 4689999876542210 000111
Q ss_pred CC-----CCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceeE
Q 016552 285 GW-----RGPVAAMD-EEVLYGIDENSCTLSRYDEVMDDWKE 320 (387)
Q Consensus 285 ~~-----~~~~~~~~-~~~ly~~~~~~~~l~~yd~~~~~W~~ 320 (387)
.| ...++... ++++|++-+ ...+.||..+.+-..
T Consensus 316 ~f~g~p~~iDaA~~~~~g~~YfFkg--~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 316 NFQGIGPKIDAVFYSKNKYYYFFQG--SNQFEYDFLLQRITK 355 (365)
T ss_dssp HSTTCCSSCSEEEEETTTEEEEEET--TEEEEEETTTTEEEE
T ss_pred cCCCCCCccceeeEecCCcEEEEeC--CEEEEEECCccEEec
Confidence 11 12344444 789999964 478999998765433
No 318
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=71.20 E-value=42 Score=27.55 Aligned_cols=141 Identities=15% Similarity=0.108 Sum_probs=72.6
Q ss_pred EEEECCEEEEEecccCCCCCCCCccEEEeccC----------CceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCC
Q 016552 142 LVSLSGKLILLAATTHNFNPALTRPLIFDPIC----------RTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSD 211 (387)
Q Consensus 142 ~~~~~~~l~v~GG~~~~~~~~~~~~~vyd~~t----------~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 211 (387)
++...+.+|++-| +.+|+++... ..|..| |. .-.++....++++|++-|.
T Consensus 11 ~~~~~g~~~fFkg---------~~~w~~~~~~~~~gyP~~I~~~w~gl---P~-~iDAa~~~~~g~~yfFkg~------- 70 (196)
T 3c7x_A 11 VAMLRGEMFVFKE---------RWFWRVRNNQVMDGYPMPIGQFWRGL---PA-SINTAYERKDGKFVFFKGD------- 70 (196)
T ss_dssp EEEETTEEEEEET---------TEEEEEETTEECTTCSEEHHHHSTTC---CS-SCCEEEECTTSCEEEEETT-------
T ss_pred EEEcCCEEEEEEC---------CEEEEEECCccCCCCceEhhHhccCC---CC-CccEEEEeCCCcEEEecCC-------
Confidence 3457899999987 2456665321 123222 22 1122222246789988653
Q ss_pred CcceEEEEECCCCccccCeEEcCC----CCCCCccccceEEEE-E--CCEEEEEeeeCCeEEEEECCCCceee-----cc
Q 016552 212 VAKSVEKWDLMNGEKNSRWEKTGE----LKDGRFSREAIDAVG-W--KGKLCLVNVKGAEGAVYDVVANTWDD-----MR 279 (387)
Q Consensus 212 ~~~~v~~yd~~~~~~~~~W~~~~~----~p~~~~~~~~~~~~~-~--~g~lyv~gg~~~~i~~yD~~~~~W~~-----~~ 279 (387)
..++||..+-...+ =..+.. +|... ..+|. . ++++|++.| +..+.||..+++-.. +.
T Consensus 71 ---~yw~~~~~~~~~gy-Pk~I~~~~~glP~~~-----IDAA~~~~~~g~~yfFkG--~~yw~yd~~~~~v~~gyPk~i~ 139 (196)
T 3c7x_A 71 ---KHWVFDEASLEPGY-PKHIKELGRGLPTDK-----IDAALFWMPNGKTYFFRG--NKYYRFNEELRAVDSEYPKNIK 139 (196)
T ss_dssp ---EEEEEETTEECTTC-SEEGGGTCBSCCSSC-----CSEEEEETTTTEEEEEET--TEEEEEETTTTEECTTCSEEGG
T ss_pred ---EEEEEeCCcccCCC-CeEhhhcCCCCCCCc-----ccEEEEEccCCEEEEEEC--CEEEEEeCCcccccCCCCccHH
Confidence 45777643211000 012222 33211 22333 2 689999976 468999987754221 11
Q ss_pred c--ccccCCCCcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCc
Q 016552 280 E--GMVRGWRGPVAAMD-EE-VLYGIDENSCTLSRYDEVMDD 317 (387)
Q Consensus 280 ~--~~~~~~~~~~~~~~-~~-~ly~~~~~~~~l~~yd~~~~~ 317 (387)
. +++. ...++... ++ ++|++-+ ...+.||..+.+
T Consensus 140 ~~~gip~--~idaAf~~~~~~~~YfFkg--~~y~r~d~~~~~ 177 (196)
T 3c7x_A 140 VWEGIPE--SPRGSFMGSDEVFTYFYKG--NKYWKFNNQKLK 177 (196)
T ss_dssp GSBTCCS--SCSEEEECTTSSEEEEEET--TEEEEEETTTTE
T ss_pred HCCCcCC--CcceeEEecCCCEEEEEEC--CEEEEEECCcce
Confidence 0 1111 12233333 33 8999954 478999987763
No 319
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=70.51 E-value=73 Score=30.08 Aligned_cols=136 Identities=13% Similarity=0.167 Sum_probs=74.8
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcC--CCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~--~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++++|++-|. ..+.||..+.+ ..... .+|. .-++...+|++|++.|. ..+.||..+
T Consensus 158 ~~~~yfFkG~----------~yw~yd~~~~~----~~~~~w~gi~~------iDAA~~~~g~~YfFkG~--~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQGN----------RKWFWDLTTGT----KKERSWPAVGN------CTSALRWLGRYYCFQGN--QFLRFNPVS 215 (460)
T ss_dssp SSEEEEEETT----------EEEEEETTTTE----EEEECCTTSCC------CSEEEEETTEEEEEETT--EEEEECTTT
T ss_pred CCeEEEEecc----------cEEEEecccce----eecccCCCCCc------cchheeeCCceEEEECC--EEEEEcCcc
Confidence 6788888763 45889988776 54321 1221 12355568999999774 688899865
Q ss_pred Cc------------eeecccc-------------c-c-c---CCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceeE-
Q 016552 273 NT------------WDDMREG-------------M-V-R---GWRGPVAAM-DEEVLYGIDENSCTLSRYDEVMDDWKE- 320 (387)
Q Consensus 273 ~~------------W~~~~~~-------------~-~-~---~~~~~~~~~-~~~~ly~~~~~~~~l~~yd~~~~~W~~- 320 (387)
.+ |.-++.. . + . .....++.. .+|++|++- +...+.+|...+.+..
T Consensus 216 ~~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFK--g~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 216 GEVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFS--GSHYWRLDTNRDGWHSW 293 (460)
T ss_dssp CCCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEE--TTEEEECTTGGGCCCCE
T ss_pred CcccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEe--CCEEEEEecCCCCcCcc
Confidence 43 2111100 0 0 0 011223333 468999985 3467888876543321
Q ss_pred -cccc-cccc-CceEEEEeCCeEEEEecCCCeEEEEecc
Q 016552 321 -VVKS-DLLK-GARHAAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 321 -v~~~-~~~~-~~~~~~~~~g~i~v~gg~~~~i~~~d~~ 356 (387)
|... +.+. .--++...++++|+|- |...++|+..
T Consensus 294 ~Is~~WpglP~~IDAAf~~~~~~yfFk--G~~yw~f~~~ 330 (460)
T 1qhu_A 294 PIAHQWPQGPSTVDAAFSWEDKLYLIQ--DTKVYVFLTK 330 (460)
T ss_dssp EGGGTCTTSCSSCSEEEEETTEEEEEE--TTEEEEEECS
T ss_pred chhhhccCCCCCCcEEEEECCeEEEEe--CCEEEEEeCC
Confidence 1110 1111 1223344578999994 4457777755
No 320
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=70.50 E-value=7.8 Score=36.32 Aligned_cols=59 Identities=12% Similarity=0.022 Sum_probs=38.8
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceeEccccccccCceEEE--EeCCeEEEEecCCCeEEEEecc
Q 016552 296 EVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 296 ~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~g~i~v~gg~~~~i~~~d~~ 356 (387)
+.+++.++.++.|..||.++.. .+...........++ ..+|+.++.|+..+.|.+||+.
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~--~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETV--KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSE--EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCEEEEEECCCeEEEEEcCCCc--ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 5677777778999999998772 221111122222233 3367888888888889999987
No 321
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=68.50 E-value=92 Score=30.43 Aligned_cols=151 Identities=6% Similarity=-0.072 Sum_probs=78.1
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCC-CCCC-CCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGP-ELVT-PRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~-~~p~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 222 (387)
+|+.+..++.++ .+.+||-.+ .+..+. .++. .+...+.+ .-+|++.+.||.+. .+.+||..
T Consensus 96 dG~~LAs~s~dg-------~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG--------tVkIWd~~ 159 (588)
T 2j04_A 96 IDDWMAVLSNNG-------NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG--------ELQFFSIR 159 (588)
T ss_dssp SSSCEEEEETTS-------CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS--------EEEEEECC
T ss_pred CCCEEEEEeCCC-------cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC--------EEEEEECC
Confidence 556566655433 467777433 444433 2221 22233333 34778888887755 78899988
Q ss_pred CCcc---c-cCeEEcCCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc----eeecccccccCCCCcEEEEe
Q 016552 223 NGEK---N-SRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT----WDDMREGMVRGWRGPVAAMD 294 (387)
Q Consensus 223 ~~~~---~-~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~----W~~~~~~~~~~~~~~~~~~~ 294 (387)
++.. . .....+..-..+... .....+...+. .+.++.++.+..+|..++. |.++... ......+++..
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~-~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~--h~~~V~svaFs 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKD-WVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNA--SRRKITDLKIV 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCC-CEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECC--CSSCCCCEEEE
T ss_pred CCccccccceeeeeeecccccccc-cEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeeccc--ccCcEEEEEEE
Confidence 7740 0 001222100111000 11223344444 6677777889999998766 3333211 11123345555
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCce
Q 016552 295 EEVLYGIDENSCTLSRYDEVMDDW 318 (387)
Q Consensus 295 ~~~ly~~~~~~~~l~~yd~~~~~W 318 (387)
| ...+.++ .+.|..||.++..=
T Consensus 236 g-~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 236 D-YKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp T-TEEEEEC-SSEEEEEETTTTEE
T ss_pred C-CEEEEEe-CCeEEEEECCCCeE
Confidence 5 4444444 58999999988755
No 322
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=68.07 E-value=86 Score=30.82 Aligned_cols=107 Identities=9% Similarity=-0.136 Sum_probs=49.2
Q ss_pred ccEEEeccCCceeeCCCCCCC---CcceeEEEeCCEEEEEecCCC-CCCCCCcceEEEEECCCCccccCeEEcCCCCCCC
Q 016552 165 RPLIFDPICRTWTFGPELVTP---RRWCAAGCSRGAVYVASGIGS-QFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 165 ~~~vyd~~t~~W~~l~~~p~~---r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~ 240 (387)
.++++|+.+++-..+-..... .....+..-+++..+++..+. .........++++|..+++ -..+.......
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~l~~~~~~~ 113 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD----PQSLDPPEVSN 113 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC----CEECCCTTCCS
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc----eEeccCCcccc
Confidence 578888888765543222111 112222233566555544322 1111223688999999888 65554322110
Q ss_pred ccccceEEEEECCEEEEEeeeCCeEEEEECCCCceee
Q 016552 241 FSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDD 277 (387)
Q Consensus 241 ~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~ 277 (387)
.. -...+..-||+..++... ..+.++|..+++-..
T Consensus 114 ~~-~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~ 148 (723)
T 1xfd_A 114 AK-LQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIR 148 (723)
T ss_dssp CC-CSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEE
T ss_pred cc-ccccEECCCCCEEEEEEC-CeEEEEECCCCceEE
Confidence 00 001111224432222222 356777776665443
No 323
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=67.05 E-value=56 Score=27.45 Aligned_cols=100 Identities=10% Similarity=-0.022 Sum_probs=55.4
Q ss_pred ECCEEEEEeeeCCeEEEEECCCC--ceeec--ccccccCC----------CCcEEEE--eCCeEEEEeCCCCeEEEEeCC
Q 016552 251 WKGKLCLVNVKGAEGAVYDVVAN--TWDDM--REGMVRGW----------RGPVAAM--DEEVLYGIDENSCTLSRYDEV 314 (387)
Q Consensus 251 ~~g~lyv~gg~~~~i~~yD~~~~--~W~~~--~~~~~~~~----------~~~~~~~--~~~~ly~~~~~~~~l~~yd~~ 314 (387)
.+|++|++-| +..+.||..++ .-... +..+...| ...++.. .++++|++-+ ...++||..
T Consensus 69 ~~g~~~fFkg--~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG--~~yw~~d~~ 144 (225)
T 3oyo_A 69 EASEAYVFSG--NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG--NKYVRIAYD 144 (225)
T ss_dssp STTEEEEEET--TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET--TEEEEEETT
T ss_pred CCCeEEEEcC--CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC--CeEEEEECC
Confidence 4899999977 46899986432 11111 11011111 1223333 3689999964 478999987
Q ss_pred CCceeE----cc-ccccc-----c-CceEEEE--eCCeEEEEecCCCeEEEEecc
Q 016552 315 MDDWKE----VV-KSDLL-----K-GARHAAA--GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 315 ~~~W~~----v~-~~~~~-----~-~~~~~~~--~~g~i~v~gg~~~~i~~~d~~ 356 (387)
+++-.. +. ..|.. . .--++.. .++++|++-| ...+.||..
T Consensus 145 ~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--~~ywr~d~~ 197 (225)
T 3oyo_A 145 SKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--QNYVRIDFT 197 (225)
T ss_dssp TTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--TEEEEEECC
T ss_pred CCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--CEEEEEeCC
Confidence 765443 11 12222 1 1222333 4789999954 456777776
No 324
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=66.37 E-value=57 Score=27.25 Aligned_cols=62 Identities=10% Similarity=-0.011 Sum_probs=36.7
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeec-ccccccCC-----CCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCc
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDM-REGMVRGW-----RGPVAAMD--EEVLYGIDENSCTLSRYDEVMDD 317 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~~~~-----~~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~~ 317 (387)
+|++|++.| +..+.||..+++-..- +..+...| ...++... +|.+|++-+ ...+.||..+..
T Consensus 135 ~g~~YfFkG--~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg--~~y~~~~~~~~~ 204 (218)
T 1gen_A 135 NKKTYIFAG--DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG--AYYLKLENQSLK 204 (218)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEET--TEEEEEETTEEE
T ss_pred CCeEEEEEC--CEEEEEECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEEC--CEEEEEECCcee
Confidence 689999976 4689999877642211 00000111 12333333 379999954 478889886654
No 325
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=65.53 E-value=75 Score=28.45 Aligned_cols=60 Identities=12% Similarity=0.105 Sum_probs=36.0
Q ss_pred eCCeEEEEeC----------CCCeEEEEeCCCCceeEccccccccCceEEE-EeCCeEEEEecCCCeEEEEeccC
Q 016552 294 DEEVLYGIDE----------NSCTLSRYDEVMDDWKEVVKSDLLKGARHAA-AGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 294 ~~~~ly~~~~----------~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
.++++|+... ..+.+++||.++.+ .+...+-.. ...++ .-+|+.+.++.. +.+.+||..+
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 3578998753 13479999998874 444433222 33333 345553334344 8899999884
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=65.14 E-value=11 Score=34.31 Aligned_cols=102 Identities=8% Similarity=-0.018 Sum_probs=51.4
Q ss_pred eEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEee-eCCeEEEEECCCCceeeccc--ccccC--CC-C
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNV-KGAEGAVYDVVANTWDDMRE--GMVRG--WR-G 288 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg-~~~~i~~yD~~~~~W~~~~~--~~~~~--~~-~ 288 (387)
.+.++|..+++.. |+.-.....+..... ......++.+|++.. .+..++.||.+++.|..--. .+... .. .
T Consensus 21 ~l~Ald~~tG~~~--W~~~~~~~~p~~~~~-~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~ 97 (339)
T 2be1_A 21 GLHAVDRRNGHII--WSIEPENFQPLIEIQ-EPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLK 97 (339)
T ss_dssp CEEEEETTTTEEE--EEECGGGSCCSEECC-CSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEE
T ss_pred eEEEEECCCCcEE--EEecCCccCCcEEec-CCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccC
Confidence 6788888888766 886543101111000 001113567777753 33588899988876542111 01110 00 0
Q ss_pred cEEEE-------eCCeEEEEeCCCCeEEEEeCCCCc--eeE
Q 016552 289 PVAAM-------DEEVLYGIDENSCTLSRYDEVMDD--WKE 320 (387)
Q Consensus 289 ~~~~~-------~~~~ly~~~~~~~~l~~yd~~~~~--W~~ 320 (387)
...++ .++.+|+ +..++.+++.|..+++ |+.
T Consensus 98 ~~pvv~~~~~~~~~g~Vy~-Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 98 TNIVVNDSGKIVEDEKVYT-GSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp CC----------CCEEEEE-CEEEEEEEEEETTTCCEEEEE
T ss_pred CCceeecccccccCCEEEE-EecCCEEEEEECCCCcEEEEE
Confidence 11122 4555554 3346788888888774 554
No 327
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=64.61 E-value=57 Score=26.67 Aligned_cols=103 Identities=13% Similarity=0.056 Sum_probs=54.2
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCce-eeCCC--CCCC--CcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTW-TFGPE--LVTP--RRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W-~~l~~--~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 220 (387)
++++|++-| +.+|+|+..+-.- +.+.. +|.. ....+....++++|++-|. ..+.||
T Consensus 64 ~~~~yfFkG---------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~----------~ywr~d 124 (195)
T 1itv_A 64 SKKLFFFSG---------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR----------RLWRFD 124 (195)
T ss_dssp TCCEEEEET---------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT----------EEEEEE
T ss_pred CCeEEEEeC---------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC----------EEEEEe
Confidence 578999987 3567777542110 11111 1211 1222222236799999663 457888
Q ss_pred CCCCccccCe-EEcC----CCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc
Q 016552 221 LMNGEKNSRW-EKTG----ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 221 ~~~~~~~~~W-~~~~----~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
..+++-.-.. ..+. .+|.. ..++...+|.+|++.| ...+.||..+..
T Consensus 125 ~~~~~~~~gyPr~i~~~w~Gvp~~-----idaa~~~~g~~Yffkg--~~y~~~~~~~~~ 176 (195)
T 1itv_A 125 VKAQMVDPRSASEVDRMFPGVPLD-----THDVFQFREKAYFCQD--RFYWRVSSRSEL 176 (195)
T ss_dssp TTTTEECGGGCEEHHHHSTTSCSS-----CSEEEEETTEEEEEET--TEEEEEECCTTC
T ss_pred CCcccccCCCccChhhcCCCCCCC-----CCEEEEeCCeEEEEeC--CEEEEEECCccE
Confidence 7765410000 0111 12211 1234456899999876 468889987664
No 328
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=63.66 E-value=74 Score=27.65 Aligned_cols=161 Identities=10% Similarity=0.002 Sum_probs=81.3
Q ss_pred CCccEEEeccCCceeeCCCCCCCCcceeEEEeCC-EEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCc
Q 016552 163 LTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 163 ~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~ 241 (387)
...++++|..+++-+.+ .......-.-+| .|+....... .....++++|..+++ ...+...+. .
T Consensus 42 ~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~----~~~~~l~~~~~~~g~----~~~l~~~~~--~ 106 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEE----KKVSEIWVADLETLS----SKKILEAKN--I 106 (347)
T ss_dssp EEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETT----TTEEEEEEEETTTTE----EEEEEEESE--E
T ss_pred cceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccC----CCcceEEEEECCCCc----eEEEEcCCC--c
Confidence 34688899988876665 111111122244 4444332211 122367888988877 665543321 1
Q ss_pred cccceEEEE-ECCE-EEEEeee--------------------------CCeEEEEECCCCce-eecccccccCCCCcEEE
Q 016552 242 SREAIDAVG-WKGK-LCLVNVK--------------------------GAEGAVYDVVANTW-DDMREGMVRGWRGPVAA 292 (387)
Q Consensus 242 ~~~~~~~~~-~~g~-lyv~gg~--------------------------~~~i~~yD~~~~~W-~~~~~~~~~~~~~~~~~ 292 (387)
..... -||+ |++.... ...+..+|+.+++. ..+.. + ....++
T Consensus 107 ----~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~---~~~~~~ 177 (347)
T 2gop_A 107 ----RSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P---RFSSGI 177 (347)
T ss_dssp ----EEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--E---TTCEEE
T ss_pred ----cceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C---Cccccc
Confidence 11222 2554 4444311 14688899988876 55443 1 222333
Q ss_pred E-eCCeEEEEeCC---------CCeEEEEeCCCCceeEccccccccCceEEEEeCCe-EEEEecC-------CCeEEEEe
Q 016552 293 M-DEEVLYGIDEN---------SCTLSRYDEVMDDWKEVVKSDLLKGARHAAAGGGR-VCAVCEN-------GGGIVVVD 354 (387)
Q Consensus 293 ~-~~~~ly~~~~~---------~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~~~~g~-i~v~gg~-------~~~i~~~d 354 (387)
. .+| +++.... ...|+.+| +++++.+... .......-+|+ |++.+.. ...++++|
T Consensus 178 ~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 178 WHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred CCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 3 344 5544421 22588888 6666665442 22222255665 4444422 25788888
No 329
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=62.93 E-value=1.3e+02 Score=30.05 Aligned_cols=199 Identities=10% Similarity=0.022 Sum_probs=96.4
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEE-EeCCEEEEEecCCCC------CCCCCcceEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAG-CSRGAVYVASGIGSQ------FSSDVAKSVEK 218 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~-~~~~~iyv~GG~~~~------~~~~~~~~v~~ 218 (387)
+|+.++++....+ .....++++|..+++..... .+.... ...+ .-+..||+.. .+.. .+......+..
T Consensus 173 DG~~la~~~~~~G--~e~~~i~v~dl~tg~~~~~~-~~~~~~-~~~~wspD~~l~~~~-~~~~~~~~~~~~~~~~~~v~~ 247 (741)
T 1yr2_A 173 DGRLLAYSVQDGG--SDWRTVKFVGVADGKPLADE-LKWVKF-SGLAWLGNDALLYSR-FAEPKEGQAFQALNYNQTVWL 247 (741)
T ss_dssp TSSEEEEEEEETT--CSEEEEEEEETTTCCEEEEE-EEEEES-CCCEESTTSEEEEEE-CCCC--------CCCCCEEEE
T ss_pred CCCEEEEEEcCCC--CceEEEEEEECCCCCCCCcc-CCCcee-ccEEEECCCEEEEEE-ecCcccccccccCCCCCEEEE
Confidence 5555555442221 12246899999999876531 111110 0111 1133444433 2211 00112346777
Q ss_pred EECCCCccccCeEEcCCCCCC-CccccceEEEEECCE-EEEEeee----CCeEEEEECCCC--c-eeecccccccCCCCc
Q 016552 219 WDLMNGEKNSRWEKTGELKDG-RFSREAIDAVGWKGK-LCLVNVK----GAEGAVYDVVAN--T-WDDMREGMVRGWRGP 289 (387)
Q Consensus 219 yd~~~~~~~~~W~~~~~~p~~-~~~~~~~~~~~~~g~-lyv~gg~----~~~i~~yD~~~~--~-W~~~~~~~~~~~~~~ 289 (387)
++..++... =..+...+.. .+. ......-||+ |++.... ...++.+|+.+. . |..+.... ... ..
T Consensus 248 ~~lgt~~~~--~~lv~~~~~~~~~~--~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~-~~ 321 (741)
T 1yr2_A 248 HRLGTPQSA--DQPVFATPELPKRG--HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL-KAQ-WD 321 (741)
T ss_dssp EETTSCGGG--CEEEECCTTCTTCE--EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS-SSC-EE
T ss_pred EECCCCchh--CEEEeccCCCCeEE--EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC-Cce-EE
Confidence 787766410 0112111111 110 0112233665 4433322 257888898876 6 87775422 111 11
Q ss_pred EEEEeCCeEEEEeCC---CCeEEEEeCCC--CceeEccccccccCceEEEEeCCeEEEEecCC--CeEEEEecc
Q 016552 290 VAAMDEEVLYGIDEN---SCTLSRYDEVM--DDWKEVVKSDLLKGARHAAAGGGRVCAVCENG--GGIVVVDVK 356 (387)
Q Consensus 290 ~~~~~~~~ly~~~~~---~~~l~~yd~~~--~~W~~v~~~~~~~~~~~~~~~~g~i~v~gg~~--~~i~~~d~~ 356 (387)
.+...++.||+.... ...|+.+|.++ ..|+.+....... ...+...++++++....+ ..++++|..
T Consensus 322 ~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~-l~~~~~~~~~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 322 FVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN-LESVGIAGNRLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp EEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE-EEEEEEEBTEEEEEEEETTEEEEEEEETT
T ss_pred EEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe-EEEEEEECCEEEEEEEECCEEEEEEEeCC
Confidence 223467788887642 35799999988 5788875322111 112233477877776433 467777765
No 330
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=62.48 E-value=1.1e+02 Score=28.98 Aligned_cols=22 Identities=14% Similarity=-0.026 Sum_probs=15.8
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
+.++||.|..+ +.+.++|..++
T Consensus 95 r~~l~v~~l~s--------~~I~viD~~t~ 116 (462)
T 2ece_A 95 RRFLIVPGLRS--------SRIYIIDTKPN 116 (462)
T ss_dssp SCEEEEEBTTT--------CCEEEEECCSC
T ss_pred CCEEEEccCCC--------CeEEEEECCCC
Confidence 45677766543 38899999877
No 331
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=62.45 E-value=75 Score=27.26 Aligned_cols=192 Identities=10% Similarity=-0.005 Sum_probs=97.8
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceeeCCCCCCCCcceeEEEe-CCEEEEEecCCCCCCCCCcceEEEEECCCC
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGCS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 224 (387)
++.||++... ...++.+|+..+.+++++- .........+.. ++.++|.- .. ...+.+|+...+
T Consensus 38 ~~~L~aV~d~-------~~~I~~ld~~g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs~-E~-------~~~l~~~~v~~~ 101 (255)
T 3qqz_A 38 SNTLFSTINK-------PAAIVEMTTNGDLIRTIPL-DFVKDLETIEYIGDNQFVISD-ER-------DYAIYVISLTPN 101 (255)
T ss_dssp TTEEEEEEET-------TEEEEEEETTCCEEEEEEC-SSCSSEEEEEECSTTEEEEEE-TT-------TTEEEEEEECTT
T ss_pred CCEEEEEECC-------CCeEEEEeCCCCEEEEEec-CCCCChHHeEEeCCCEEEEEE-CC-------CCcEEEEEcCCC
Confidence 4679988653 2468999999777777632 222223333433 44555542 11 135666765544
Q ss_pred ccccCeE-EcCCCCCC-CccccceEEEEE---CCEEEEEeeeC-CeEEEEEC--CCCceeecccc-c--ccCCC-CcEEE
Q 016552 225 EKNSRWE-KTGELKDG-RFSREAIDAVGW---KGKLCLVNVKG-AEGAVYDV--VANTWDDMREG-M--VRGWR-GPVAA 292 (387)
Q Consensus 225 ~~~~~W~-~~~~~p~~-~~~~~~~~~~~~---~g~lyv~gg~~-~~i~~yD~--~~~~W~~~~~~-~--~~~~~-~~~~~ 292 (387)
... |. ....++.. ........+.++ +++||+..... ..++.|+- .+..-+..... . ..... ..+++
T Consensus 102 ~~i--~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 102 SEV--KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp CCE--EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred Cee--eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 311 32 11112210 011112345555 45899987766 37888872 22111111100 0 00111 23444
Q ss_pred Ee--CCeEEEEeCCCCeEEEEeCCCCceeEcccccc-------ccCceEEE-EeCCeEEEEecCCCeEEEEecc
Q 016552 293 MD--EEVLYGIDENSCTLSRYDEVMDDWKEVVKSDL-------LKGARHAA-AGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 293 ~~--~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~-------~~~~~~~~-~~~g~i~v~gg~~~~i~~~d~~ 356 (387)
+. .++||++...+..|..+|.+.+.=..+.-.+. .+.+-+++ --+|.|||++.. +-+++|...
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~~ 252 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTPQ 252 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC-
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEec
Confidence 43 56899999888899999988662222211111 12233333 346889999554 567777654
No 332
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=61.12 E-value=73 Score=29.23 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=28.7
Q ss_pred CCeEEEEeCCCCeEEEEeCCCC-ceeEccccccccCceEEEEeCCeEE
Q 016552 295 EEVLYGIDENSCTLSRYDEVMD-DWKEVVKSDLLKGARHAAAGGGRVC 341 (387)
Q Consensus 295 ~~~ly~~~~~~~~l~~yd~~~~-~W~~v~~~~~~~~~~~~~~~~g~i~ 341 (387)
++.+|+-+.....|.+||.+++ .|+.......+. ......++|+-+
T Consensus 170 ~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd-~~~~~~i~G~~~ 216 (381)
T 3q6k_A 170 ETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAE-RPTKFDYGGKEY 216 (381)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCC-SCEEEEETTEEE
T ss_pred ccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccc-cCcceEECCEEe
Confidence 4678988866678999999876 687664221111 233445555544
No 333
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=58.86 E-value=19 Score=32.90 Aligned_cols=61 Identities=8% Similarity=-0.075 Sum_probs=38.2
Q ss_pred CEEEEEeeeCC----eEEEEECCCCceeecccccccCCCCcEEEE--eCCeEEEEeC---------CCCeEEEEeCCCCc
Q 016552 253 GKLCLVNVKGA----EGAVYDVVANTWDDMREGMVRGWRGPVAAM--DEEVLYGIDE---------NSCTLSRYDEVMDD 317 (387)
Q Consensus 253 g~lyv~gg~~~----~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~--~~~~ly~~~~---------~~~~l~~yd~~~~~ 317 (387)
.++|+.....+ .+.++|+++++ .+.. .+.+.. +.+++ .+.++|+... .++.|.++|+.+.+
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~--v~~~-i~vG~~-P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGV--TLGH-SLGAFL-SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTE--EEEE-EEECTT-CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CeEEEECCccCCccceEEEEECCCCe--EEEE-EeCCCC-CceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 46788776544 77899988764 3332 233332 24444 3567888751 24579999998874
No 334
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=57.15 E-value=1.1e+02 Score=27.61 Aligned_cols=99 Identities=16% Similarity=0.120 Sum_probs=53.3
Q ss_pred EEEEEeeeC--CeEEE--EECCCCceeecccc--cccCCCCcEEEEeCCeEEEEeC-----------------CCCeEEE
Q 016552 254 KLCLVNVKG--AEGAV--YDVVANTWDDMREG--MVRGWRGPVAAMDEEVLYGIDE-----------------NSCTLSR 310 (387)
Q Consensus 254 ~lyv~gg~~--~~i~~--yD~~~~~W~~~~~~--~~~~~~~~~~~~~~~~ly~~~~-----------------~~~~l~~ 310 (387)
+||+++... ..+++ +|+.++....+... .+....+..++..+|.+|+-+. ..+.++.
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 588886542 34444 56655555444321 2222334556666788887542 1357999
Q ss_pred EeCCCCceeEccccccccCceEEE-EeCC-eEEEEecCCCeEEEEecc
Q 016552 311 YDEVMDDWKEVVKSDLLKGARHAA-AGGG-RVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 311 yd~~~~~W~~v~~~~~~~~~~~~~-~~~g-~i~v~gg~~~~i~~~d~~ 356 (387)
||+. +.+.+. .....+-+++ .-++ .+|+.-.....|+.||+.
T Consensus 208 ~d~~--~~~~~~--~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 208 YSPN--DVRVVA--EGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp ECTT--CCEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EECC--eEEEee--cCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 9984 333332 1222233333 3344 566665556777787776
No 335
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=56.50 E-value=87 Score=26.15 Aligned_cols=144 Identities=18% Similarity=0.154 Sum_probs=72.8
Q ss_pred eEEEE--ECCEEEEEecccCCCCCCCCccEEEec---------cCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCC
Q 016552 140 VQLVS--LSGKLILLAATTHNFNPALTRPLIFDP---------ICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQF 208 (387)
Q Consensus 140 ~~~~~--~~~~l~v~GG~~~~~~~~~~~~~vyd~---------~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 208 (387)
+.++. .+|.+|++-|. .+|+++. .+..|..|| . ..-++...++++|++-|.
T Consensus 20 ~DAi~~~~~g~~yfFkg~---------~~Wr~~~~~~~~~p~~Is~~wpgLP---~--~IDAA~~~~~~~yfFkG~---- 81 (219)
T 1hxn_A 20 LSAMVSDNHGATYVFSGS---------HYWRLDTNRDGWHSWPIAHQWPQGP---S--TVDAAFSWEDKLYLIQDT---- 81 (219)
T ss_dssp CCEEEECTTSCEEEEETT---------EEEESSSSSCTTCCEEGGGTCTTSC---S--SCSEEEEETTEEEEEETT----
T ss_pred EeEEEECCCCcEEEEeCC---------EEEEEcCCCCCCCceEhhhhccCCC---C--CccEEEEECCcEEEecCC----
Confidence 55555 37889999872 3444443 333454443 2 222333458999999663
Q ss_pred CCCCcceEEEEECCCC-ccccCe-EEcC---CCCCCCccccceEEEEE---CCEEEEEeeeCCeEEEEECCCC---ceee
Q 016552 209 SSDVAKSVEKWDLMNG-EKNSRW-EKTG---ELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVAN---TWDD 277 (387)
Q Consensus 209 ~~~~~~~v~~yd~~~~-~~~~~W-~~~~---~~p~~~~~~~~~~~~~~---~g~lyv~gg~~~~i~~yD~~~~---~W~~ 277 (387)
..++|+..++ +..-.. ..+. .+|.... .....+|+. ++++|++.|. ..+.||..+. .|..
T Consensus 82 ------~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~-~~~IDAA~~~~~~gk~yfFkG~--~ywr~d~~~~P~~i~~~ 152 (219)
T 1hxn_A 82 ------KVYVFLTKGGYTLVNGYPKRLEKELGSPPVIS-LEAVDAAFVCPGSSRLHIMAGR--RLWWLDLKSGAQATWTE 152 (219)
T ss_dssp ------EEEEEECSSSCEECTTCCEEHHHHHCCCSSCC-CSCCCEEECCTTCCEEEEEETT--EEEEEEGGGGGGCCCEE
T ss_pred ------EEEEEeCCCCceecCCCCeehhhccCCCCccc-ccccceeEEecCCCEEEEEeCC--EEEEEeCCCCceEhhhc
Confidence 5688876532 100000 1111 2332200 011234442 5899999774 6899997653 2322
Q ss_pred cccccccCCCCcEEEE------------eCCeEEEEeCCCCeEEEEeCCC
Q 016552 278 MREGMVRGWRGPVAAM------------DEEVLYGIDENSCTLSRYDEVM 315 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~------------~~~~ly~~~~~~~~l~~yd~~~ 315 (387)
.+. .+.. ..++.. .++.+|++-+ ..-+.||..+
T Consensus 153 ~~g-~p~~--vdAa~~~~~~~~~~~~~~~~~~~YFFkg--~~y~r~~~~~ 197 (219)
T 1hxn_A 153 LPW-PHEK--VDGALCMEKPLGPNSCSTSGPNLYLIHG--PNLYCYRHVD 197 (219)
T ss_dssp ECC-SCSC--CSEEEEESSCSSSCCSCSSSCEEEEEET--TEEEEESSHH
T ss_pred CCC-CCCC--cCEEEEccccccccceeccCCeEEEEEC--CEEEEEeCCc
Confidence 111 1111 122333 3457999854 4678887643
No 336
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=53.78 E-value=1.3e+02 Score=27.47 Aligned_cols=97 Identities=12% Similarity=-0.053 Sum_probs=53.5
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEccccccccCce
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLKGAR 331 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~~~~ 331 (387)
++.+.+++ .+..+.+||..+..-.......... -..+......+.++ ..+|.|.+||.++..-.. .....
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~--v~~i~~~~p~~av~-~~dG~L~v~dl~~~~~~~------~~~~V 165 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKP--VFQLKNVNNTLVIL-NSVNDLSALDLRTKSTKQ------LAQNV 165 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSC--EEEEEECSSEEEEE-ETTSEEEEEETTTCCEEE------EEESE
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccceeecc--eeeEEecCCCEEEE-ECCCCEEEEEccCCcccc------ccCCc
Confidence 66544444 5568999998776532211111111 11222233344444 457899999998765433 22234
Q ss_pred EEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 332 HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 332 ~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
.++++..+-.++|..++.+..|++...
T Consensus 166 s~v~WSpkG~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 166 TSFDVTNSQLAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEEEECSSEEEEEETTSCEEEEEEETT
T ss_pred eEEEEcCCceEEEEcCCcEEEEcCCCc
Confidence 445443332566667777888888854
No 337
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=52.92 E-value=62 Score=31.67 Aligned_cols=151 Identities=11% Similarity=0.014 Sum_probs=77.1
Q ss_pred CccEEEeccCCceee-CCCCCCCCcceeEE-EeCC-EEEEEecCCCCCCCCCcceEEEEECCCCcc------ccCeEEcC
Q 016552 164 TRPLIFDPICRTWTF-GPELVTPRRWCAAG-CSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEK------NSRWEKTG 234 (387)
Q Consensus 164 ~~~~vyd~~t~~W~~-l~~~p~~r~~~~~~-~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~------~~~W~~~~ 234 (387)
+.+.+.|..+.+... +...|.+..-+.+. .-+| .+||.+... +.+.+||..+.+. .-+=..+.
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s--------~~VsVid~~~~~~~~~~~l~~~~~v~~ 325 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS--------PTVTVLDVTRFDAVFYENADPRSAVVA 325 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS--------SBEEEEEGGGHHHHHHSCCCGGGGEEE
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC--------CeEEEEECcccccccccccCcccceEE
Confidence 457888888843322 22233333323333 3345 567765443 4889999986520 00000111
Q ss_pred CCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCC--------CceeecccccccCCC-CcEEE-------EeCCeE
Q 016552 235 ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVA--------NTWDDMREGMVRGWR-GPVAA-------MDEEVL 298 (387)
Q Consensus 235 ~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~--------~~W~~~~~~~~~~~~-~~~~~-------~~~~~l 298 (387)
..+.+.-+ .+.+..-+|.+|+...-++.+.++|.++ ..+..+.. .+.... ++..+ ..|..|
T Consensus 326 ~v~vG~gP--~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~k-idV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 326 EPELGLGP--LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDK-LDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp CCBCCSCE--EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEE-EECSSCEEEEEETTTTSTTCCSSEE
T ss_pred EcCCCCCc--ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEE-eecccccccceeccceEeCCCCCEE
Confidence 22222111 1434444678888877677888898776 23554443 222211 11111 335567
Q ss_pred EEEeCCC-CeE-----------EEEeCCCCceeEccccc
Q 016552 299 YGIDENS-CTL-----------SRYDEVMDDWKEVVKSD 325 (387)
Q Consensus 299 y~~~~~~-~~l-----------~~yd~~~~~W~~v~~~~ 325 (387)
|+....+ .++ ..||.++++=+.+...|
T Consensus 403 ~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p 441 (595)
T 1fwx_A 403 VCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGP 441 (595)
T ss_dssp EEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEE
T ss_pred EEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEc
Confidence 7765433 233 77888877766665544
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=51.98 E-value=88 Score=29.32 Aligned_cols=95 Identities=7% Similarity=0.003 Sum_probs=49.8
Q ss_pred ECCEEEEEeeeCCeEEEEECCCCceeeccccccc------CCCC-cEEEEe-----CCeEEEEeCC------------CC
Q 016552 251 WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVR------GWRG-PVAAMD-----EEVLYGIDEN------------SC 306 (387)
Q Consensus 251 ~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~------~~~~-~~~~~~-----~~~ly~~~~~------------~~ 306 (387)
-+|+|||....+..|..++..+++-..+.. .+. +..+ ..+++. ++.||+.... ..
T Consensus 36 pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~-~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~ 114 (454)
T 1cru_A 36 PDNQIWLTERATGKILRVNPESGSVKTVFQ-VPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQT 114 (454)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEE-CTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCcEeEEec-CCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcccccccc
Confidence 367787775444467788776555544332 111 1122 246676 7899998631 23
Q ss_pred eEEEEeCCCC--c---eeEcc-ccccc-cC-ceEE-EEeCCeEEEEecC
Q 016552 307 TLSRYDEVMD--D---WKEVV-KSDLL-KG-ARHA-AAGGGRVCAVCEN 346 (387)
Q Consensus 307 ~l~~yd~~~~--~---W~~v~-~~~~~-~~-~~~~-~~~~g~i~v~gg~ 346 (387)
.|.+|+.+.+ . .+.+- .+|.. .+ ...+ +.-+|+|||..|.
T Consensus 115 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 115 IIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred EEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 5787775432 2 23322 22321 11 2222 2357899997653
No 339
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=51.47 E-value=1.3e+02 Score=26.61 Aligned_cols=67 Identities=12% Similarity=0.033 Sum_probs=35.6
Q ss_pred ECCE-EEEEeeeCC-----eEEEEECC-CCceeeccc-c--cccCCCCcEEEE---eCCeEEEEeCCCCeEEEEeCCCCc
Q 016552 251 WKGK-LCLVNVKGA-----EGAVYDVV-ANTWDDMRE-G--MVRGWRGPVAAM---DEEVLYGIDENSCTLSRYDEVMDD 317 (387)
Q Consensus 251 ~~g~-lyv~gg~~~-----~i~~yD~~-~~~W~~~~~-~--~~~~~~~~~~~~---~~~~ly~~~~~~~~l~~yd~~~~~ 317 (387)
-||+ ||+.+...+ .+.+||.. +++...+.. . ....-...+..- .++.||+....++.|.+|+.+.+.
T Consensus 264 pdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 264 FSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp TTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred CCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 3665 665543333 78999985 555543211 0 111111112222 355677766556788888877663
No 340
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=51.11 E-value=1.4e+02 Score=26.99 Aligned_cols=153 Identities=7% Similarity=-0.073 Sum_probs=75.7
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCceee-CCCCCC-CCcc-eeEEEeCCEEEEEecCCCC----CCCCCcceEEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF-GPELVT-PRRW-CAAGCSRGAVYVASGIGSQ----FSSDVAKSVEK 218 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W~~-l~~~p~-~r~~-~~~~~~~~~iyv~GG~~~~----~~~~~~~~v~~ 218 (387)
++.+++-|+.+ ..+.++|+.|++-.+ +..-.. .... +.+..-++++.+.+..+.. ..+....++..
T Consensus 192 ~~~~LaSgS~D-------~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 192 MQEALLGTTIM-------NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp STTEEEEEETT-------SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred CCceEEEecCC-------CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 34566666643 367899999887433 321110 1111 1223347777766543210 01223457788
Q ss_pred EECCCCccccCeEEcC--CCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCceee-cccccccCCCCcEEEE-e
Q 016552 219 WDLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWRGPVAAM-D 294 (387)
Q Consensus 219 yd~~~~~~~~~W~~~~--~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~~-~ 294 (387)
+|+.+.. -..+- .+|.+.... ......++.+.+.+..+..+.++|+.+++-.. +... ... ....++. -
T Consensus 265 Wd~~tgk----~l~v~~~~~p~Gh~~~--~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH-~~~-vvs~vafSP 336 (356)
T 2w18_A 265 INPKTTL----SVGVMLYCLPPGQAGR--FLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPV-SDQ-HWSFVKWSG 336 (356)
T ss_dssp EETTTTE----EEEEEEECCCTTCCCC--EEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC---C-CCCEEEECS
T ss_pred EECCCCE----EEEEEEeeccCCCcce--eEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCC-CCC-eEEEEEECC
Confidence 9998776 32211 122222110 11122234444555555789999999887533 2211 111 1122333 3
Q ss_pred CCeEEEEeCCCCeEEEEeC
Q 016552 295 EEVLYGIDENSCTLSRYDE 313 (387)
Q Consensus 295 ~~~ly~~~~~~~~l~~yd~ 313 (387)
+|++.+-+..++.|.+||.
T Consensus 337 DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 337 TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SSSEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEECCCcEEEecC
Confidence 5677777777889999985
No 341
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=47.28 E-value=1.2e+02 Score=25.00 Aligned_cols=99 Identities=17% Similarity=0.103 Sum_probs=53.8
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCce---eeCCCCCCCC---cceeEEEe--CCEEEEEecCCCCCCCCCcceEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRTW---TFGPELVTPR---RWCAAGCS--RGAVYVASGIGSQFSSDVAKSVE 217 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~W---~~l~~~p~~r---~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~ 217 (387)
++++|++-| +.+|+|+..+-.- +.+..+--|. ..-++... ++++|++-|. ..+
T Consensus 79 ~~~iyfFkG---------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~----------~yw 139 (207)
T 1pex_A 79 HDLIFIFRG---------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN----------QVW 139 (207)
T ss_dssp TTEEEEEET---------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT----------EEE
T ss_pred CCcEEEEcc---------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC----------EEE
Confidence 589999987 3567776432111 1222211121 11222222 4799999763 558
Q ss_pred EEECCCCccccCeEE-----c----CCCCCCCccccceEEEEECCEEEEEeeeCCeEEEEECCCCc
Q 016552 218 KWDLMNGEKNSRWEK-----T----GELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 218 ~yd~~~~~~~~~W~~-----~----~~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
.||..+++ =.. + +.+|.. .-++...+|++|++-| +..+.||..+++
T Consensus 140 r~d~~~~~----~d~gyPr~i~~~~~Gip~~-----iDaAf~~~g~~YfFkg--~~y~rf~~~~~~ 194 (207)
T 1pex_A 140 RYDDTNHI----MDKDYPRLIEEDFPGIGDK-----VDAVYEKNGYIYFFNG--PIQFEYSIWSNR 194 (207)
T ss_dssp EEETTTTE----ECSSCCCBHHHHSTTSCSC-----CSEEEEETTEEEEEET--TEEEEEETTTTE
T ss_pred EEeCcCcc----ccCCCCccHHHcCCCCCCC-----ccEEEEcCCcEEEEEC--CEEEEEeCCccE
Confidence 88876543 110 1 112211 1234456999999966 468899987764
No 342
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=47.14 E-value=1.5e+02 Score=26.85 Aligned_cols=102 Identities=10% Similarity=-0.005 Sum_probs=57.0
Q ss_pred CCEEEEEeeeCCeEEEEECCCC------ceeecc-----cc-cccCCCCcEEEEeCCeEEEEeC-C-------CCeEEEE
Q 016552 252 KGKLCLVNVKGAEGAVYDVVAN------TWDDMR-----EG-MVRGWRGPVAAMDEEVLYGIDE-N-------SCTLSRY 311 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~------~W~~~~-----~~-~~~~~~~~~~~~~~~~ly~~~~-~-------~~~l~~y 311 (387)
++++|++.. +.+.+.|..++ .|.... .. .+.+.......-.++++|+... . .+.+.++
T Consensus 222 ~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~Vi 299 (368)
T 1mda_H 222 PGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV 299 (368)
T ss_dssp TTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEE
T ss_pred CCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEE
Confidence 456666655 57888998653 243221 00 1111111122224578998533 2 2356699
Q ss_pred eCCCCceeEccccccccCceEEE-EeCCe-EEEEec-CCCeEEEEeccC
Q 016552 312 DEVMDDWKEVVKSDLLKGARHAA-AGGGR-VCAVCE-NGGGIVVVDVKA 357 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~-~~~g~-i~v~gg-~~~~i~~~d~~~ 357 (387)
|+++.+ .+...+....+.++. .-+|+ +|+..+ ..+.+.++|..+
T Consensus 300 D~~t~~--vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 300 TASVGQ--TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp ESSSCC--EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred ECCCCe--EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 998874 444443322344343 34555 888877 689999999994
No 343
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=44.97 E-value=2.4e+02 Score=27.80 Aligned_cols=61 Identities=10% Similarity=-0.014 Sum_probs=34.7
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeec-ccccccCCC-----CcEEEEe--CCeEEEEeCCCCeEEEEeCCCC
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDM-REGMVRGWR-----GPVAAMD--EEVLYGIDENSCTLSRYDEVMD 316 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~~~~~-----~~~~~~~--~~~ly~~~~~~~~l~~yd~~~~ 316 (387)
++++|++.| +..+.||..+++=... +..+...|. ..++... +|++|++-+ ..-+.||..+.
T Consensus 548 ~gktYFFkG--~~ywryd~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG--~~Ywr~d~~~~ 616 (631)
T 1ck7_A 548 NKKTYIFAG--DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG--AYYLKLENQSL 616 (631)
T ss_dssp TCEEEEEET--TEEEEEETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEET--TEEECCBTTBT
T ss_pred CCeEEEEEC--CEEEEEcCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEEC--CEEEEEeCccc
Confidence 689999976 4689999876532111 000111111 2233332 378999854 46788887654
No 344
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=43.26 E-value=1.8e+02 Score=25.88 Aligned_cols=63 Identities=11% Similarity=0.066 Sum_probs=37.1
Q ss_pred CEEEEEeeeC-----CeEEEEECCCCcee---ecccccc---cC-CCCcEEEE-eCCeEEEEeCC-------------CC
Q 016552 253 GKLCLVNVKG-----AEGAVYDVVANTWD---DMREGMV---RG-WRGPVAAM-DEEVLYGIDEN-------------SC 306 (387)
Q Consensus 253 g~lyv~gg~~-----~~i~~yD~~~~~W~---~~~~~~~---~~-~~~~~~~~-~~~~ly~~~~~-------------~~ 306 (387)
+.||+..... ..+..|+...++.. .+-...+ .. .....+++ .+|.||+..+. .+
T Consensus 90 g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g 169 (352)
T 2ism_A 90 PYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGG 169 (352)
T ss_dssp CEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSS
T ss_pred CEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCce
Confidence 5899886542 47889988765432 2211122 11 11223443 46799998642 25
Q ss_pred eEEEEeCCC
Q 016552 307 TLSRYDEVM 315 (387)
Q Consensus 307 ~l~~yd~~~ 315 (387)
+|+++|++.
T Consensus 170 ~I~ri~~dG 178 (352)
T 2ism_A 170 KILRLTPEG 178 (352)
T ss_dssp EEEEECTTS
T ss_pred EEEEEcCCC
Confidence 799999876
No 345
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=42.86 E-value=1.6e+02 Score=27.65 Aligned_cols=64 Identities=8% Similarity=0.018 Sum_probs=37.2
Q ss_pred CCEEEEEecCCCCCCCCCcceEEEEECCCCccccC-eEEcC----CCCCCCccccceEEEEECCEEEEEeeeCCeEEEEE
Q 016552 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSR-WEKTG----ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYD 269 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~-W~~~~----~~p~~~~~~~~~~~~~~~g~lyv~gg~~~~i~~yD 269 (387)
++++|++-|. ..++||..+.+..-. =+.+. .+|.. .-+++..+|++|++-| ...+.||
T Consensus 367 ~~k~yfFkG~----------~yw~yd~~~~~~~~gYPk~I~~~fpgip~~-----iDAA~~~~g~~YFFkg--~~ywr~d 429 (450)
T 1su3_A 367 TGKTYFFVAN----------KYWRYDEYKRSMDPGYPKMIAHDFPGIGHK-----VDAVFMKDGFFYFFHG--TRQYKFD 429 (450)
T ss_dssp TTEEEEEETT----------EEEEEETTTTEECSSCSEEHHHHSTTSCSC-----CSEEEEETTEEEEEET--TEEEEEE
T ss_pred CCeEEEEeCC----------EEEEEeCCCccccCCCCcchhhcCCCCCCC-----ccEEEEcCCeEEEEeC--CEEEEEE
Confidence 5899999663 568888765430000 01111 12211 1234456899999976 4689999
Q ss_pred CCCCce
Q 016552 270 VVANTW 275 (387)
Q Consensus 270 ~~~~~W 275 (387)
..+.+=
T Consensus 430 ~~~~~v 435 (450)
T 1su3_A 430 PKTKRI 435 (450)
T ss_dssp TTTTEE
T ss_pred CCcceE
Confidence 877653
No 346
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=42.15 E-value=72 Score=27.03 Aligned_cols=64 Identities=17% Similarity=0.228 Sum_probs=38.4
Q ss_pred CCEEEEEeeeCCeEEEEECCC---Cceeeccccccc-CCCCcEEE--EeCCeEEEEeCCCCeEEEEeCC---CCcee
Q 016552 252 KGKLCLVNVKGAEGAVYDVVA---NTWDDMREGMVR-GWRGPVAA--MDEEVLYGIDENSCTLSRYDEV---MDDWK 319 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~---~~W~~~~~~~~~-~~~~~~~~--~~~~~ly~~~~~~~~l~~yd~~---~~~W~ 319 (387)
+|.||.+ ....++..|+.+ +.|......+.. +|..-.++ -.+|.||.+ .+|.|+..++- .+.|.
T Consensus 51 ~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl 123 (236)
T 1tl2_A 51 GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWI 123 (236)
T ss_dssp TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHH
T ss_pred CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCcee
Confidence 7889988 334788888854 356544322211 33322222 246789998 35899998872 35673
No 347
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=40.60 E-value=2.7e+02 Score=27.19 Aligned_cols=72 Identities=14% Similarity=0.261 Sum_probs=37.9
Q ss_pred CCEEEEEeeeC----CeEEEEE----CCCCceeeccc---ccccCCCC-----cEEEEeCC-eEEEE-eCCCC--eEEEE
Q 016552 252 KGKLCLVNVKG----AEGAVYD----VVANTWDDMRE---GMVRGWRG-----PVAAMDEE-VLYGI-DENSC--TLSRY 311 (387)
Q Consensus 252 ~g~lyv~gg~~----~~i~~yD----~~~~~W~~~~~---~~~~~~~~-----~~~~~~~~-~ly~~-~~~~~--~l~~y 311 (387)
|+++.+..... ..+..+| +.++++..+-. ....++.. ......+| .|++. ...++ .|+.|
T Consensus 263 D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~ 342 (719)
T 1z68_A 263 DERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYI 342 (719)
T ss_dssp SSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEE
Confidence 67766553221 3588899 87777665531 11122211 11222344 45553 32333 69999
Q ss_pred eCCCCceeEccc
Q 016552 312 DEVMDDWKEVVK 323 (387)
Q Consensus 312 d~~~~~W~~v~~ 323 (387)
|.++...+.+..
T Consensus 343 ~~~~~~~~~lt~ 354 (719)
T 1z68_A 343 KDTVENAIQITS 354 (719)
T ss_dssp SSCSTTCEECSC
T ss_pred ECCCCceEeccc
Confidence 998887665543
No 348
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=36.58 E-value=16 Score=22.04 Aligned_cols=21 Identities=29% Similarity=0.271 Sum_probs=15.7
Q ss_pred CCCCCCCCChHHHHHHHhhhc
Q 016552 38 DHQPLLPGLPDHIAHLCLSHV 58 (387)
Q Consensus 38 ~~~~~~~~LPddl~~~iL~rL 58 (387)
.+.+-...||.||-+|+|+--
T Consensus 16 VD~eVF~~LP~dIQ~Ells~~ 36 (48)
T 2kwv_A 16 VDQEVFKQLPADIQEEILSGK 36 (48)
T ss_dssp CCGGGTTTSCHHHHHHHTTCC
T ss_pred CCHHHHHHCcHHHHHHHHhcc
Confidence 345667789999999988743
No 349
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=36.10 E-value=2e+02 Score=28.18 Aligned_cols=97 Identities=6% Similarity=-0.001 Sum_probs=49.3
Q ss_pred eEEEEECCCCccccCeEEcCCCCCCC-ccccceEEEEECCEEEEEeee---------CCeEEEEECCCCce---eecccc
Q 016552 215 SVEKWDLMNGEKNSRWEKTGELKDGR-FSREAIDAVGWKGKLCLVNVK---------GAEGAVYDVVANTW---DDMREG 281 (387)
Q Consensus 215 ~v~~yd~~~~~~~~~W~~~~~~p~~~-~~~~~~~~~~~~g~lyv~gg~---------~~~i~~yD~~~~~W---~~~~~~ 281 (387)
.+.++|..+++ -..+....... .. -...+..-||+..+++.. ...+.++|.++++. ..+..
T Consensus 37 ~i~~~~~~~g~----~~~~~~~~~~~~~~-~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~- 110 (719)
T 1z68_A 37 NIVLYNIETGQ----SYTILSNRTMKSVN-ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPR- 110 (719)
T ss_dssp CEEEEESSSCC----EEEEECHHHHHTTT-CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCS-
T ss_pred CEEEEEcCCCc----EEEEEccccccccc-eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCc-
Confidence 67889998887 55443211000 00 012223336664444332 25789999998876 44421
Q ss_pred cccCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceeEcc
Q 016552 282 MVRGWRGPVAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVV 322 (387)
Q Consensus 282 ~~~~~~~~~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~ 322 (387)
....++..-.|..|.+. ..+.|+.||.+++.-..+.
T Consensus 111 ---~~~~~~~SPDG~~la~~--~~~~i~~~~~~~g~~~~l~ 146 (719)
T 1z68_A 111 ---PIQYLCWSPVGSKLAYV--YQNNIYLKQRPGDPPFQIT 146 (719)
T ss_dssp ---SBCCEEECSSTTCEEEE--ETTEEEEESSTTSCCEECC
T ss_pred ---ccccceECCCCCEEEEE--ECCeEEEEeCCCCCcEEEe
Confidence 11111111223334433 2568888888777655543
No 350
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=35.35 E-value=2.8e+02 Score=25.81 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=26.4
Q ss_pred CCEEEEEeee------------CCeEEEEECCCC--ce---eecccccccC--CCCcEEEE-eCCeEEEEeC
Q 016552 252 KGKLCLVNVK------------GAEGAVYDVVAN--TW---DDMREGMVRG--WRGPVAAM-DEEVLYGIDE 303 (387)
Q Consensus 252 ~g~lyv~gg~------------~~~i~~yD~~~~--~W---~~~~~~~~~~--~~~~~~~~-~~~~ly~~~~ 303 (387)
++.||+.... ...+..|+...+ +. +.+-..++.. .....+++ -+|+||+..+
T Consensus 91 ~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 91 NPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp SCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 6889987643 135777765432 22 2222112221 12333444 3779999754
No 351
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=35.00 E-value=2.6e+02 Score=25.29 Aligned_cols=102 Identities=7% Similarity=-0.015 Sum_probs=55.6
Q ss_pred CCEEEEEecccCCCCCCCCccEEEeccCCc--e-eeCCC--CCCC-CcceeEEEe--CCEEEEEecCCCCCCCCCcceEE
Q 016552 146 SGKLILLAATTHNFNPALTRPLIFDPICRT--W-TFGPE--LVTP-RRWCAAGCS--RGAVYVASGIGSQFSSDVAKSVE 217 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vyd~~t~~--W-~~l~~--~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~ 217 (387)
++++|++-| +.+|+|+..+-. + +.+.. +|.. ...-++... ++++|++-|. ..+
T Consensus 236 ~g~~~fFkg---------~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~----------~yw 296 (365)
T 3ba0_A 236 RNQVFLFKD---------DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN----------QYW 296 (365)
T ss_dssp GTEEEEEET---------TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT----------EEE
T ss_pred CCEEEEEeC---------CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC----------EEE
Confidence 689999977 346777653211 1 12222 2221 122222223 5799999663 568
Q ss_pred EEECCCCccccCeEE-----c----CCCCCCCccccceEEEEE-CCEEEEEeeeCCeEEEEECCCCceee
Q 016552 218 KWDLMNGEKNSRWEK-----T----GELKDGRFSREAIDAVGW-KGKLCLVNVKGAEGAVYDVVANTWDD 277 (387)
Q Consensus 218 ~yd~~~~~~~~~W~~-----~----~~~p~~~~~~~~~~~~~~-~g~lyv~gg~~~~i~~yD~~~~~W~~ 277 (387)
.||..+.+ -.. + +.+|. ..-++... +|++|++-| ...+.||..+.+-..
T Consensus 297 ~yd~~~~~----v~~gyPk~I~~~f~g~p~-----~iDaA~~~~~g~~YfFkg--~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 297 RYDERRQM----MDPGYPKLITKNFQGIGP-----KIDAVFYSKNKYYYFFQG--SNQFEYDFLLQRITK 355 (365)
T ss_dssp EEETTTTE----ECSSCCCCHHHHSTTCCS-----SCSEEEEETTTEEEEEET--TEEEEEETTTTEEEE
T ss_pred EEeCCcce----ecCCCCcchhhcCCCCCC-----ccceeeEecCCcEEEEeC--CEEEEEECCccEEec
Confidence 88876554 211 1 11221 11223334 899999876 468999988776443
No 352
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=34.60 E-value=3.6e+02 Score=26.88 Aligned_cols=144 Identities=8% Similarity=-0.074 Sum_probs=72.3
Q ss_pred CCccEEEeccCC--ce--eeCCCCCCCCcceeEE-EeCCEEEEEecCCCCCCCCCcceEEEEECCC-CccccCeEE-cCC
Q 016552 163 LTRPLIFDPICR--TW--TFGPELVTPRRWCAAG-CSRGAVYVASGIGSQFSSDVAKSVEKWDLMN-GEKNSRWEK-TGE 235 (387)
Q Consensus 163 ~~~~~vyd~~t~--~W--~~l~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~-~~~~~~W~~-~~~ 235 (387)
..+++++|..+. .+ +.+.+-.. ...+... ..++.||+....+. .....+..+|..+ .. |.. +-+
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~----a~~~~L~~~d~~~~~~----~~~~li~ 364 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGG----AVNHKLLIAPRGQPSD----WSHVLVD 364 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTT----CTTCEEEEEETTSTTC----CCCEEEC
T ss_pred CceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCC----CCCcEEEEEcCCCccc----ceeeEEC
Confidence 356788888765 45 55432211 1112222 23778888765431 1223678888876 56 876 432
Q ss_pred CCCCCccccceEEEEECCEEEEEeeeC--CeEEEEEC-------CCCc-eeecccccccCCCCcEEEE--------eCCe
Q 016552 236 LKDGRFSREAIDAVGWKGKLCLVNVKG--AEGAVYDV-------VANT-WDDMREGMVRGWRGPVAAM--------DEEV 297 (387)
Q Consensus 236 ~p~~~~~~~~~~~~~~~g~lyv~gg~~--~~i~~yD~-------~~~~-W~~~~~~~~~~~~~~~~~~--------~~~~ 297 (387)
-.... ........++.|++..... ..+.++|+ .++. -+.+. ++.. +....+ .++.
T Consensus 365 ~~~~~---~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~--l~~~--~~~~~~~~~~~~~~~~~~ 437 (751)
T 2xe4_A 365 HSEDV---FMESIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVV--MEEP--IFTVHLVESQMLEYEEPT 437 (751)
T ss_dssp CCSSE---EEEEEEECSSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECC--CCCS--SCEEEECGGGCCCTTCSC
T ss_pred CCCCc---EEEEEEEECCEEEEEEEeCCEEEEEEEecccccccccCCccceEEC--CCCc--eeEEEeccCcccCCCCCE
Confidence 11110 1112233467777665544 56788886 3333 33432 1111 111222 2334
Q ss_pred EEEEeCC---CCeEEEEeCCCCceeEcc
Q 016552 298 LYGIDEN---SCTLSRYDEVMDDWKEVV 322 (387)
Q Consensus 298 ly~~~~~---~~~l~~yd~~~~~W~~v~ 322 (387)
+++.... -..++.||.++++.+.+.
T Consensus 438 l~~~~ss~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 438 FRMEYSSLATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp EEEEEEETTEEEEEEEECTTTCCEEEEE
T ss_pred EEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 4443221 146899999888776655
No 353
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=33.84 E-value=2.4e+02 Score=24.57 Aligned_cols=141 Identities=11% Similarity=0.018 Sum_probs=79.3
Q ss_pred EEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCCCCccccceEEEEECCEEEEEeeeC--------
Q 016552 191 AGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-------- 262 (387)
Q Consensus 191 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~-------- 262 (387)
.+..++.||.....+. ..+...+..-.. =.++.+-. .....+.++.||......
T Consensus 21 ~~~~g~~iy~~n~~d~-------~~ly~~~~dg~~----~~~l~~~~-------~~~i~~~g~~Iyy~~~~~~~~~~~~~ 82 (302)
T 3s25_A 21 FCESDGEVFFSNTNDN-------GRLYAMNIDGSN----IHKLSNDT-------AMYINADKNYVYYVRNNNQKITSQTF 82 (302)
T ss_dssp EEEETTEEEEEEGGGT-------TEEEEEETTSCS----CEEEEEEE-------EEEEEECSSEEEEEEECC------CC
T ss_pred EEEeCCEEEEEeCCCC-------ceEEEEcCCCCC----CEEccCCc-------eeeEEEcCCEEEEEECCCCcccccce
Confidence 4456778888754322 245555544333 22222110 022345577888876532
Q ss_pred -----CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEe---CCCCeEEEEeCCCCceeEccccccccCceEEE
Q 016552 263 -----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGID---ENSCTLSRYDEVMDDWKEVVKSDLLKGARHAA 334 (387)
Q Consensus 263 -----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~---~~~~~l~~yd~~~~~W~~v~~~~~~~~~~~~~ 334 (387)
..+...++....=+.+... .+....+.+++||... .....|+..+.++..-+.+..-.. ..+.
T Consensus 83 ~~~n~~~Iy~i~~dg~~~~~l~~~-----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~ 153 (302)
T 3s25_A 83 FSYDRNSLCRIKRNGHGSTVLDPD-----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCN 153 (302)
T ss_dssp SSCCSEEEEEEETTSCCCEEEECS-----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSE
T ss_pred eccCCCeEEEEeCCCCcceEeecC-----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEee
Confidence 3577777776653333321 1235667889999987 234578888888765555543221 1124
Q ss_pred EeCCeEEEEecCCCeEEEEeccCC
Q 016552 335 AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 335 ~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
..++.||....+...|++.+++..
T Consensus 154 ~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 154 TSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp EETTEEEEECTTTCCEEEEETTTT
T ss_pred EECCEEEEEeCCCceEEEEECCCC
Confidence 566777777555567777777643
No 354
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=32.73 E-value=4.8e+02 Score=27.78 Aligned_cols=133 Identities=11% Similarity=0.103 Sum_probs=71.5
Q ss_pred CCccEEEeccCCceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcC--CCCCCC
Q 016552 163 LTRPLIFDPICRTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG--ELKDGR 240 (387)
Q Consensus 163 ~~~~~vyd~~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~--~~p~~~ 240 (387)
...+++|+...++.+.+...+..-...+.+.++|+|.+.-| ..+.+||...++ --... ..+.
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig----------~~l~vy~l~~~~----~L~~~~~~~~~-- 926 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN----------STVRLYEWTTEK----ELRTECNHYNN-- 926 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET----------TEEEEEEECTTS----CEEEEEEECCC--
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC----------CEEEEEECCCCc----eEEEEeecccc--
Confidence 34678888876666666544443345566677887766543 267888887665 22211 0110
Q ss_pred ccccceEEEEECCEEEEEeeeC-CeEEEEECCCCceeecccccccCCCCcEEEEeCCeEEEEeCCCCeE--EEEeCC
Q 016552 241 FSREAIDAVGWKGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTL--SRYDEV 314 (387)
Q Consensus 241 ~~~~~~~~~~~~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~l--~~yd~~ 314 (387)
.. .....+.++++++-.-.. -.+..|+...++-..++......|.-+...+.++.+ +.+...+.+ ..||++
T Consensus 927 i~--~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~-l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 927 IM--ALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNF-LGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp SC--EEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEE-EEEETTSEEEEEEECTT
T ss_pred EE--EEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcE-EEEcCCCcEEEEecCCC
Confidence 00 012334577765543322 456779999988888875444333333333444433 333234554 446664
No 355
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=32.44 E-value=3.9e+02 Score=26.62 Aligned_cols=91 Identities=13% Similarity=0.000 Sum_probs=50.3
Q ss_pred CeEEEEECCCC--ce--eecccccccCCCCcEEE-EeCCeEEEEeCCC----CeEEEEeCCC-CceeE-ccccccccCce
Q 016552 263 AEGAVYDVVAN--TW--DDMREGMVRGWRGPVAA-MDEEVLYGIDENS----CTLSRYDEVM-DDWKE-VVKSDLLKGAR 331 (387)
Q Consensus 263 ~~i~~yD~~~~--~W--~~~~~~~~~~~~~~~~~-~~~~~ly~~~~~~----~~l~~yd~~~-~~W~~-v~~~~~~~~~~ 331 (387)
..++.+|+.+. .+ +.+..... . ...+.. ..++.||++...+ ..|+.+|.++ ..|+. +-.........
T Consensus 295 ~~l~~~d~~~~~~~~~~~~l~~~~~-~-~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~ 372 (751)
T 2xe4_A 295 AEVHLLDLRKGNAHNTLEIVRPREK-G-VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFME 372 (751)
T ss_dssp EEEEEEESSSCTTCCCEEESSCCCT-T-CCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEE
T ss_pred ceEEEEECCCCCCCceeEEeecCCC-C-ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEE
Confidence 67888998875 46 54432111 1 111222 2377888886432 3799999886 68876 43321111111
Q ss_pred EEEEeCCeEEEEecC--CCeEEEEec
Q 016552 332 HAAAGGGRVCAVCEN--GGGIVVVDV 355 (387)
Q Consensus 332 ~~~~~~g~i~v~gg~--~~~i~~~d~ 355 (387)
.+...++.|++.... ...++++|+
T Consensus 373 ~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 373 SIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEECCEEEEEEEeCCEEEEEEEec
Confidence 223346777776543 256788886
No 356
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=31.26 E-value=2.2e+02 Score=23.49 Aligned_cols=99 Identities=12% Similarity=0.080 Sum_probs=50.0
Q ss_pred CCEEEEEeeeCCeEEEEECCCCce---eeccc-ccccCC-CCcEEEE--eCCeEEEEeCCCCeEEEEeCCCCceeE----
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTW---DDMRE-GMVRGW-RGPVAAM--DEEVLYGIDENSCTLSRYDEVMDDWKE---- 320 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W---~~~~~-~~~~~~-~~~~~~~--~~~~ly~~~~~~~~l~~yd~~~~~W~~---- 320 (387)
++++|++-| +..++||-.+..- +.+.. +.+... ...++.. .++++|++-+ ...+.||..++.=..
T Consensus 87 ~~k~yfFkG--~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--~~ywr~d~~~~~v~~gyPr 162 (218)
T 1gen_A 87 EEKAVFFAG--NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--DKFWRYNEVKKKMDPGFPK 162 (218)
T ss_dssp TTEEEEEET--TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--TEEEEEETTTTEECSSCCE
T ss_pred CCEEEEEeC--CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--CEEEEEECccccccCCCCc
Confidence 689999976 4689998531100 01111 111111 1233333 3689999954 478999987763211
Q ss_pred -cc-ccccc-cCceEEEEeC--CeEEEEecCCCeEEEEecc
Q 016552 321 -VV-KSDLL-KGARHAAAGG--GRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 321 -v~-~~~~~-~~~~~~~~~~--g~i~v~gg~~~~i~~~d~~ 356 (387)
+. .-+.. ..--++.... |++|++-| ...+.||..
T Consensus 163 ~i~~~w~g~p~~idaAf~~~~~g~~YfFkg--~~y~~~~~~ 201 (218)
T 1gen_A 163 LIADAWNAIPDNLDAVVDLQGGGHSYFFKG--AYYLKLENQ 201 (218)
T ss_dssp EHHHHSSSCCSSCSEEEECTTTCEEEEEET--TEEEEEETT
T ss_pred chhhccCCCCCCCCEEEEEcCCCcEEEEEC--CEEEEEECC
Confidence 00 00111 1112234443 88999843 345556554
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=30.98 E-value=4.1e+02 Score=26.46 Aligned_cols=148 Identities=12% Similarity=0.021 Sum_probs=77.4
Q ss_pred CccEEEeccC--CceeeCCCCCCCCcceeEEEeCCEEEEEecCCCCC--CCCCcceEEEEECCC--------CccccCeE
Q 016552 164 TRPLIFDPIC--RTWTFGPELVTPRRWCAAGCSRGAVYVASGIGSQF--SSDVAKSVEKWDLMN--------GEKNSRWE 231 (387)
Q Consensus 164 ~~~~vyd~~t--~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~v~~yd~~~--------~~~~~~W~ 231 (387)
+++++.|... ..|.++ .+ ++........++++|+....+-.. .......+.+.|..+ .. |+
T Consensus 269 ~~~~~~~~~~~~~~~~~l-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~ 341 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI-NM--PSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTS----LK 341 (711)
T ss_dssp EEEEEEECSSSSCEEEEC-CS--CTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTT----CE
T ss_pred eeEEEEcCCCCCCcceEe-ec--CCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCccccccccccc----ce
Confidence 4456666542 567766 22 332222456688999975432100 011234677788764 34 88
Q ss_pred E-cCCCCCCCccccceEEEEECCEEEEEeeeC--CeEEEEECCCCceeecc-cccccCCCCcEEE---EeCCeEEEEeC-
Q 016552 232 K-TGELKDGRFSREAIDAVGWKGKLCLVNVKG--AEGAVYDVVANTWDDMR-EGMVRGWRGPVAA---MDEEVLYGIDE- 303 (387)
Q Consensus 232 ~-~~~~p~~~~~~~~~~~~~~~g~lyv~gg~~--~~i~~yD~~~~~W~~~~-~~~~~~~~~~~~~---~~~~~ly~~~~- 303 (387)
. +++-+.. ........++.+|+..... ..+.++|+.++.|.... ..++... ..... ..++.+++...
T Consensus 342 ~~~~~~~~~----~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~-~~~~~~~~~~~~~~~~~~ss 416 (711)
T 4hvt_A 342 ILFTPTANE----VFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQN-AIFGMSSYEEEEEALITIEN 416 (711)
T ss_dssp EEECCCTTE----EEEEEEECSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTT-CEEEEECCTTCSCEEEEEEC
T ss_pred EEECCCCCC----eEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCe-EEEEEeecCcCCEEEEEEec
Confidence 7 4432211 1123445567777665444 46888998888885433 2123211 11111 12344554432
Q ss_pred --CCCeEEEEeCCCCceeEcccc
Q 016552 304 --NSCTLSRYDEVMDDWKEVVKS 324 (387)
Q Consensus 304 --~~~~l~~yd~~~~~W~~v~~~ 324 (387)
.-..++.||.+ ++++.+...
T Consensus 417 ~~~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 417 SIVPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp SSSCCEEEEECTT-SCEEEEECC
T ss_pred CCCCCEEEEEeCC-CcEEEEecC
Confidence 23579999988 777766544
No 358
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=29.17 E-value=3e+02 Score=24.35 Aligned_cols=106 Identities=11% Similarity=0.078 Sum_probs=55.4
Q ss_pred CCE-EEEEeeeCCeEEEEECCCCceeeccc---ccccCCCC-cEEEEe-----CCeEEEEeCC-------CCeEEEEeCC
Q 016552 252 KGK-LCLVNVKGAEGAVYDVVANTWDDMRE---GMVRGWRG-PVAAMD-----EEVLYGIDEN-------SCTLSRYDEV 314 (387)
Q Consensus 252 ~g~-lyv~gg~~~~i~~yD~~~~~W~~~~~---~~~~~~~~-~~~~~~-----~~~ly~~~~~-------~~~l~~yd~~ 314 (387)
+|+ |||.... ..|.++|.....=+.+.. ....+..+ ..+++. ++.||+.... ...|.+|+.+
T Consensus 28 dG~~l~V~e~~-G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~ 106 (353)
T 2g8s_A 28 DNHGMLITLRG-GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLS 106 (353)
T ss_dssp TTCCEEEEETT-TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEEC
T ss_pred CCCEEEEEeCC-ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEEC
Confidence 677 7776543 467778764321111221 11111122 245554 6889998532 2368888765
Q ss_pred CC-----ceeEcc-cccc-----ccCceEEEEeCCeEEEEecCC-------------CeEEEEeccCC
Q 016552 315 MD-----DWKEVV-KSDL-----LKGARHAAAGGGRVCAVCENG-------------GGIVVVDVKAA 358 (387)
Q Consensus 315 ~~-----~W~~v~-~~~~-----~~~~~~~~~~~g~i~v~gg~~-------------~~i~~~d~~~~ 358 (387)
.+ ..+.+- ..|. ......++.-+|.||+.-|.. ..|+.+|++..
T Consensus 107 ~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 107 DDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp TTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 43 233221 2231 111233444589999986642 36888888753
No 359
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=29.02 E-value=1.8e+02 Score=28.78 Aligned_cols=103 Identities=10% Similarity=-0.094 Sum_probs=0.0
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccccCCCCc----EEEEeCCeEEEEeCCC---------CeEEEEeCCCCce
Q 016552 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP----VAAMDEEVLYGIDENS---------CTLSRYDEVMDDW 318 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~----~~~~~~~~ly~~~~~~---------~~l~~yd~~~~~W 318 (387)
||++++.+ +..+..||+.+++=..+-.......... -...-+|+..++.... +.++.||.++++-
T Consensus 27 dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~ 104 (740)
T 4a5s_A 27 DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL 104 (740)
T ss_dssp SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcE
Q ss_pred eEccccccccCceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 319 KEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 319 ~~v~~~~~~~~~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
..+...+...... ...-+|+.++++ .+.+|+++|..++
T Consensus 105 ~~l~~~~~~~~~~-~~SPdG~~la~~-~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 105 ITEERIPNNTQWV-TWSPVGHKLAYV-WNNDIYVKIEPNL 142 (740)
T ss_dssp CCSSCCCTTEEEE-EECSSTTCEEEE-ETTEEEEESSTTS
T ss_pred EEcccCCCcceee-EECCCCCEEEEE-ECCeEEEEECCCC
No 360
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=26.09 E-value=3.5e+02 Score=24.01 Aligned_cols=107 Identities=14% Similarity=0.036 Sum_probs=58.8
Q ss_pred EEEECCEEEEEeeeCCeEEEEECCCCceeecccc--cccCCCC-cEEEEe-----CCeEEEEeCC---C----CeEEEEe
Q 016552 248 AVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREG--MVRGWRG-PVAAMD-----EEVLYGIDEN---S----CTLSRYD 312 (387)
Q Consensus 248 ~~~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~--~~~~~~~-~~~~~~-----~~~ly~~~~~---~----~~l~~yd 312 (387)
++.-+|+|||.... ..|.++|. .++ +.+... ...+..+ ..+++. ++.||+.... . ..|.+|+
T Consensus 35 a~~pdG~l~V~e~~-g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 35 APLGGGRYLVTERP-GRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp EEEETTEEEEEETT-TEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred EEcCCCeEEEEeCC-CEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEE
Confidence 34458899887654 47888874 344 444321 1112222 245554 3689987532 2 5788998
Q ss_pred CCCC--c---eeEcc-ccccc---cCceEEEEeCCeEEEEecCC-------------CeEEEEeccC
Q 016552 313 EVMD--D---WKEVV-KSDLL---KGARHAAAGGGRVCAVCENG-------------GGIVVVDVKA 357 (387)
Q Consensus 313 ~~~~--~---W~~v~-~~~~~---~~~~~~~~~~g~i~v~gg~~-------------~~i~~~d~~~ 357 (387)
.+.+ . .+.+- ..|.. .....++.-+|+||+.-|.. ..|+.+|++.
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 112 LDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp ECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred ECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 7665 2 33321 22311 11233344588999975531 3678887764
No 361
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=22.52 E-value=4e+02 Score=23.48 Aligned_cols=29 Identities=10% Similarity=0.090 Sum_probs=21.9
Q ss_pred ceEEEEeCCeEEEEecCCCeEEEEeccCC
Q 016552 330 ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 330 ~~~~~~~~g~i~v~gg~~~~i~~~d~~~~ 358 (387)
+..++..+|.+|+..-.+..|..++++..
T Consensus 270 p~G~~~~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 270 PGNLAFFRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEEEEEE
T ss_pred CcceEEECCEEEEEECCCCEEEEEEECCC
Confidence 45566689999988767788888887743
No 362
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=21.99 E-value=6.1e+02 Score=25.43 Aligned_cols=224 Identities=13% Similarity=0.149 Sum_probs=0.0
Q ss_pred EEEEeCCCCCeecCCCCC-----CCCcccccccCCCccccccceEEEEEC----CEEEEEecccCCCCCCC----CccEE
Q 016552 102 LFTFDPVSSTWDPLPRPP-----PDPPLHLILHHPSFLSRNLPVQLVSLS----GKLILLAATTHNFNPAL----TRPLI 168 (387)
Q Consensus 102 ~~~~d~~~~~W~~l~~~p-----~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~l~v~GG~~~~~~~~~----~~~~v 168 (387)
++.-+-...+|.++...+ . ..+...++++ +.+|+..| ... ..+++
T Consensus 39 v~rS~DgG~tW~~~~~~~~~~~~~----------------~~~i~~ia~dp~~~~~i~~~~g------~~~~~~~~~v~~ 96 (789)
T 1sqj_A 39 AYRWDAGTSKWIPLNDFIEAQDMN----------------IMGTESIALDPNNPDRLYLAQG------RYVGDEWAAFYV 96 (789)
T ss_dssp EEEEETTTTEEEESCTTCCGGGGG----------------GCSEEEEEEETTEEEEEEEEEC------SCTTSSCCEEEE
T ss_pred EEEecCCCCCeeECccCCCccccc----------------CCceeEEEECCCCCCEEEEEeC------ccCCCcccEEEE
Q ss_pred EeccCCceeeCCC-------CCCCCcceeEEEe---CCEEEEEecCCCCCCCCCcceEEEEECCCCccccCeEEcCCCCC
Q 016552 169 FDPICRTWTFGPE-------LVTPRRWCAAGCS---RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKD 238 (387)
Q Consensus 169 yd~~t~~W~~l~~-------~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~~~~~W~~~~~~p~ 238 (387)
=+=.-.+|+++.. ++........++. .+.+|+ |.... .+..=+=.-.+ |+.+..+|.
T Consensus 97 S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~-g~~~~--------gl~~S~DgG~T----W~~~~~~~~ 163 (789)
T 1sqj_A 97 SEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWM-GTRTE--------GIWKSSDRAKT----WTNVTSIPD 163 (789)
T ss_dssp ESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEE-ECSSS--------CEEEESSTTSS----CEEETTSCC
T ss_pred ECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEE-EeccC--------CEEEECCCCcc----cCCCccCcc
Q ss_pred CCccccceEEEEEC----CEEEEEeeeCCeEEEEECCCCceeecccccccCC------------------CCcEEEEeCC
Q 016552 239 GRFSREAIDAVGWK----GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGW------------------RGPVAAMDEE 296 (387)
Q Consensus 239 ~~~~~~~~~~~~~~----g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~------------------~~~~~~~~~~ 296 (387)
..........+.++ +.+|+.......++.=.=.-.+|+.+. ..+.+. ....+...++
T Consensus 164 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 242 (789)
T 1sqj_A 164 AFTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPVA-GQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPN 242 (789)
T ss_dssp CCSTTTCEEEEEECTTSTTCEEEEESSTTCEEEESSTTSSCEECT-TCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSS
T ss_pred ccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCcccCC-CCcCccccccccccCcccccccccceeEEcCCCC
Q ss_pred eEEEE--------eCCCCeEEEEeCCCCceeEcccccc----------cc---CceEEEEe---CCeEEEEecCC-----
Q 016552 297 VLYGI--------DENSCTLSRYDEVMDDWKEVVKSDL----------LK---GARHAAAG---GGRVCAVCENG----- 347 (387)
Q Consensus 297 ~ly~~--------~~~~~~l~~yd~~~~~W~~v~~~~~----------~~---~~~~~~~~---~g~i~v~gg~~----- 347 (387)
.||+. ++..+.|+..+-...+|+++...+. .. ....++.. .+.||+.+...
T Consensus 243 ~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~~ 322 (789)
T 1sqj_A 243 FLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPA 322 (789)
T ss_dssp EEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCSS
T ss_pred eEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCcc
Q ss_pred -CeEEEEeccCCCCCCceE
Q 016552 348 -GGIVVVDVKAAAAPTIFV 365 (387)
Q Consensus 348 -~~i~~~d~~~~~~~~~W~ 365 (387)
..++.-+-... .|+
T Consensus 323 ~~~l~~S~DgG~----tW~ 337 (789)
T 1sqj_A 323 LDSIYLSTDAGA----TWK 337 (789)
T ss_dssp CCCEEEESSTTS----SEE
T ss_pred cccEEEecCCCC----Cce
No 363
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=20.31 E-value=4.9e+02 Score=23.62 Aligned_cols=63 Identities=6% Similarity=-0.021 Sum_probs=30.9
Q ss_pred EEEEeCCeEEEEeCCCCeEEEEeCCCCceeEcccccccc-CceEEEEeCCeEEEEecCCCeEEEEeccC
Q 016552 290 VAAMDEEVLYGIDENSCTLSRYDEVMDDWKEVVKSDLLK-GARHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 290 ~~~~~~~~ly~~~~~~~~l~~yd~~~~~W~~v~~~~~~~-~~~~~~~~~g~i~v~gg~~~~i~~~d~~~ 357 (387)
.++. ++...+++ ..+.|..||..+..-.... +... .-..+......+.++ ..++.+.++|+++
T Consensus 92 ~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~--~~~~~~v~~i~~~~p~~av~-~~dG~L~v~dl~~ 155 (388)
T 1xip_A 92 FVCF-HGDQVLVS-TRNALYSLDLEELSEFRTV--TSFEKPVFQLKNVNNTLVIL-NSVNDLSALDLRT 155 (388)
T ss_dssp EEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEE--EECSSCEEEEEECSSEEEEE-ETTSEEEEEETTT
T ss_pred EEEE-CCCEEEEE-cCCcEEEEEchhhhccCcc--ceeecceeeEEecCCCEEEE-ECCCCEEEEEccC
Confidence 4445 44444444 5678999998776532211 1111 112222333333333 4455667777763
No 364
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=20.07 E-value=4.8e+02 Score=23.46 Aligned_cols=134 Identities=13% Similarity=0.070 Sum_probs=68.5
Q ss_pred CccEEE--eccCCceeeCCCC--C--CC-CcceeEEEe----CCEEEEEecCCCCCCCCCcceEEEEEC---CCCccccC
Q 016552 164 TRPLIF--DPICRTWTFGPEL--V--TP-RRWCAAGCS----RGAVYVASGIGSQFSSDVAKSVEKWDL---MNGEKNSR 229 (387)
Q Consensus 164 ~~~~vy--d~~t~~W~~l~~~--p--~~-r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~v~~yd~---~~~~~~~~ 229 (387)
+.+.+| ||.++.+..+... | .. +.-+..|.+ .+++|++-.... ..++.|+. ...+
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-------G~~~q~~l~~~~~g~---- 167 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-------GEFEQYELKADKNGY---- 167 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-------SEEEEEEEEECTTSC----
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-------CeEEEEEEEeCCCCc----
Confidence 456666 8899999998543 3 33 443444442 356655533222 25566655 3332
Q ss_pred eE--EcCCCCCCCccccceEEEEEC---CEEEEEeeeCCeEEEEECC--CC-ceeecccccccCC---CCcEEEEe-C--
Q 016552 230 WE--KTGELKDGRFSREAIDAVGWK---GKLCLVNVKGAEGAVYDVV--AN-TWDDMREGMVRGW---RGPVAAMD-E-- 295 (387)
Q Consensus 230 W~--~~~~~p~~~~~~~~~~~~~~~---g~lyv~gg~~~~i~~yD~~--~~-~W~~~~~~~~~~~---~~~~~~~~-~-- 295 (387)
.. .+..++.+- ....+++| ++||+-... ..|+.||.+ +. +-+.+.. ...+. ....+++. +
T Consensus 168 ~~~~lVR~f~lgs----q~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~-~~~g~l~aDvEGLai~~~~~ 241 (355)
T 3amr_A 168 ISGKKVRAFKMNS----QTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDR-ADGRHLTRDIEGLTIYYAAD 241 (355)
T ss_dssp EEEEEEEEEECSS----CEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEE-BSSSSBCSCEEEEEEEECGG
T ss_pred ccceEEEEecCCC----CcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEE-ecCCccccCcceEEEEecCC
Confidence 22 222222211 13355554 688875443 569999954 31 2333322 11111 12233332 2
Q ss_pred --CeEEEEeCCCCeEEEEeCC
Q 016552 296 --EVLYGIDENSCTLSRYDEV 314 (387)
Q Consensus 296 --~~ly~~~~~~~~l~~yd~~ 314 (387)
+.|++....++.+.+||.+
T Consensus 242 g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 242 GKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp GCEEEEEEEGGGTEEEEEESS
T ss_pred CCEEEEEEcCCCCEEEEEECC
Confidence 3566666556789999996
Done!