Your job contains 1 sequence.
>016557
MTKKRKNNGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGD
SGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDF
EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE
INDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL
TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN
TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP
PPPLFKDVMEKNIIPQLQRLSGHMWQG
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016557
(387 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:4010713900 - symbol:AT4G22285 species:3702 "Ar... 604 3.1e-124 3
TAIR|locus:2127490 - symbol:AT4G22410 species:3702 "Arabi... 580 3.4e-101 3
DICTYBASE|DDB_G0278929 - symbol:usp39 "putative ubiquitin... 394 1.4e-72 2
ZFIN|ZDB-GENE-030131-966 - symbol:usp39 "ubiquitin specif... 388 1.6e-71 2
UNIPROTKB|B9A018 - symbol:USP39 "U4/U6.U5 tri-snRNP-assoc... 373 1.8e-68 2
UNIPROTKB|G5E9H0 - symbol:USP39 "U4/U6.U5 tri-snRNP-assoc... 373 1.8e-68 2
UNIPROTKB|I3LFS1 - symbol:USP39 "Uncharacterized protein"... 373 1.8e-68 2
UNIPROTKB|B8ZZD1 - symbol:USP39 "U4/U6.U5 tri-snRNP-assoc... 373 2.3e-68 2
UNIPROTKB|E2QZF6 - symbol:USP39 "Uncharacterized protein"... 373 4.9e-68 2
MGI|MGI:107622 - symbol:Usp39 "ubiquitin specific peptida... 373 5.4e-68 2
UNIPROTKB|A6QQX8 - symbol:USP39 "Uncharacterized protein"... 373 5.6e-68 2
UNIPROTKB|Q53GS9 - symbol:USP39 "U4/U6.U5 tri-snRNP-assoc... 373 5.6e-68 2
RGD|1308103 - symbol:Usp39 "ubiquitin specific peptidase ... 373 6.9e-68 2
FB|FBgn0030969 - symbol:CG7288 species:7227 "Drosophila m... 362 1.1e-66 2
WB|WBGene00017280 - symbol:usp-39 species:6239 "Caenorhab... 376 2.1e-64 3
UNIPROTKB|G4MZ61 - symbol:MGG_08169 "U4/U6.U5 tri-snRNP-a... 362 6.6e-64 2
ASPGD|ASPL0000076083 - symbol:AN4458 species:162425 "Emer... 357 3.6e-61 2
UNIPROTKB|F1SVB4 - symbol:LOC100523728 "Uncharacterized p... 373 1.8e-58 2
CGD|CAL0003935 - symbol:orf19.7265 species:5476 "Candida ... 222 8.6e-39 2
UNIPROTKB|C9JIU2 - symbol:USP39 "U4/U6.U5 tri-snRNP-assoc... 373 2.2e-34 1
POMBASE|SPBC577.07 - symbol:ubp10 "ubiquitin C-terminal h... 317 4.1e-28 1
SGD|S000001901 - symbol:SAD1 "Conserved zinc-finger domai... 242 6.4e-27 2
UNIPROTKB|C9J0X5 - symbol:USP39 "U4/U6.U5 tri-snRNP-assoc... 175 2.5e-16 2
TAIR|locus:2127505 - symbol:AT4G22420 "AT4G22420" species... 160 3.3e-11 1
UNIPROTKB|F1LRN2 - symbol:Usp33 "Ubiquitin carboxyl-termi... 121 2.4e-09 2
UNIPROTKB|F1LRS9 - symbol:Usp33 "Ubiquitin carboxyl-termi... 121 2.5e-09 2
UNIPROTKB|F1P6Y2 - symbol:USP33 "Ubiquitin carboxyl-termi... 116 2.8e-09 2
MGI|MGI:2159711 - symbol:Usp33 "ubiquitin specific peptid... 119 3.1e-09 2
UNIPROTKB|I3L7M6 - symbol:USP33 "Ubiquitin carboxyl-termi... 121 3.2e-09 3
ZFIN|ZDB-GENE-040426-2323 - symbol:usp33 "ubiquitin speci... 117 4.0e-09 2
UNIPROTKB|E1BWB2 - symbol:USP33 "Ubiquitin carboxyl-termi... 127 4.3e-09 2
UNIPROTKB|F1LPJ7 - symbol:Usp33 "Ubiquitin carboxyl-termi... 121 4.8e-09 2
UNIPROTKB|J9NW59 - symbol:USP33 "Ubiquitin carboxyl-termi... 116 6.7e-09 2
ZFIN|ZDB-GENE-040426-1219 - symbol:usp20 "ubiquitin speci... 108 8.2e-08 2
UNIPROTKB|F1PD56 - symbol:USP20 "Ubiquitin carboxyl-termi... 108 8.3e-08 2
WB|WBGene00013506 - symbol:usp-3 species:6239 "Caenorhabd... 110 1.2e-07 2
UNIPROTKB|A7Z056 - symbol:USP20 "Ubiquitin carboxyl-termi... 106 1.4e-07 2
UNIPROTKB|I3LBG3 - symbol:USP20 "Ubiquitin carboxyl-termi... 107 4.4e-07 2
UNIPROTKB|F1P4F0 - symbol:USP20 "Ubiquitin carboxyl-termi... 106 5.5e-07 2
UNIPROTKB|Q9Y2K6 - symbol:USP20 "Ubiquitin carboxyl-termi... 105 1.5e-06 2
RGD|1305621 - symbol:Usp20 "ubiquitin specific peptidase ... 104 1.9e-06 2
UNIPROTKB|Q28CN3 - symbol:usp33 "Ubiquitin carboxyl-termi... 142 2.2e-06 1
UNIPROTKB|Q5R5Z6 - symbol:USP20 "Ubiquitin carboxyl-termi... 105 3.0e-06 2
MGI|MGI:1921520 - symbol:Usp20 "ubiquitin specific peptid... 104 3.1e-06 2
UNIPROTKB|B1WBD7 - symbol:usp20 "Ubiquitin carboxyl-termi... 136 9.3e-06 1
UNIPROTKB|G8JYB7 - symbol:hda-6 "Protein HDA-6, isoform d... 107 2.1e-05 1
TAIR|locus:2037985 - symbol:UBP11 "AT1G32850" species:370... 127 9.8e-05 1
WB|WBGene00008547 - symbol:F07A11.4 species:6239 "Caenorh... 127 0.00013 1
ZFIN|ZDB-GENE-081104-421 - symbol:usp11 "ubiquitin specif... 126 0.00014 1
UNIPROTKB|F6Z5C0 - symbol:usp15 "Ubiquitin carboxyl-termi... 123 0.00031 1
UNIPROTKB|I3LRX7 - symbol:I3LRX7 "Uncharacterized protein... 119 0.00033 1
CGD|CAL0000531 - symbol:orf19.6260 species:5476 "Candida ... 124 0.00035 1
UNIPROTKB|Q5RCD3 - symbol:USP4 "Ubiquitin carboxyl-termin... 122 0.00038 1
UNIPROTKB|E2RFR2 - symbol:USP43 "Ubiquitin carboxyl-termi... 121 0.00059 1
UNIPROTKB|F8VVD6 - symbol:USP44 "Ubiquitin carboxyl-termi... 93 0.00069 1
MGI|MGI:2384312 - symbol:Usp11 "ubiquitin specific peptid... 119 0.00077 1
UNIPROTKB|Q5D006 - symbol:Usp11 "Ubiquitin carboxyl-termi... 119 0.00077 1
UNIPROTKB|Q9Y4E8 - symbol:USP15 "Ubiquitin carboxyl-termi... 119 0.00084 1
MGI|MGI:101857 - symbol:Usp15 "ubiquitin specific peptida... 119 0.00084 1
UNIPROTKB|E2R988 - symbol:USP15 "Ubiquitin carboxyl-termi... 119 0.00084 1
UNIPROTKB|F1SKD5 - symbol:LOC100737425 "Ubiquitin carboxy... 119 0.00084 1
RGD|1308216 - symbol:Usp44 "ubiquitin specific peptidase ... 94 0.00087 2
RGD|1562061 - symbol:Usp17l5 "ubiquitin specific peptidas... 115 0.00097 1
RGD|1565607 - symbol:RGD1565607 "similar to mouse deubiqu... 115 0.00097 1
UNIPROTKB|B7ZVX5 - symbol:USP43 "Ubiquitin carboxyl-termi... 119 0.00098 1
UNIPROTKB|E1BKF4 - symbol:USP43 "Ubiquitin carboxyl-termi... 119 0.00098 1
UNIPROTKB|Q70EL4 - symbol:USP43 "Ubiquitin carboxyl-termi... 119 0.00098 1
>TAIR|locus:4010713900 [details] [associations]
symbol:AT4G22285 species:3702 "Arabidopsis thaliana"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR015880 Pfam:PF00443 Pfam:PF02148
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 SMART:SM00355
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 eggNOG:NOG259163 HOGENOM:HOG000188754 KO:K12847
OMA:EDDNANI EMBL:BT000778 EMBL:AK226555 IPI:IPI00541916
RefSeq:NP_001078426.1 UniGene:At.32552 ProteinModelPortal:Q8H148
SMR:Q8H148 STRING:Q8H148 PaxDb:Q8H148 PRIDE:Q8H148
EnsemblPlants:AT4G22285.1 GeneID:5008155 KEGG:ath:AT4G22285
TAIR:At4g22285 PhylomeDB:Q8H148 ProtClustDB:CLSN2685806
Genevestigator:Q8H148 Uniprot:Q8H148
Length = 541
Score = 604 (217.7 bits), Expect = 3.1e-124, Sum P(3) = 3.1e-124
Identities = 124/198 (62%), Positives = 138/198 (69%)
Query: 3 KKRKNNGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYXXXXXXXXYG-----G 57
++ NG ++E+R VK +V+E+S PP LGF NPLLPLANTY
Sbjct: 4 EREVKNGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQA 63
Query: 58 RGDSGAKVGQNGRTGXXXXXXXXXXXXXLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLD 117
RG+ AK NG G+G+ SR VEVRRDCPYLDTVNRQVLD
Sbjct: 64 RGNGVAKGEGNGNKVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLD 123
Query: 118 FDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPD 177
FDFE+FCSVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD
Sbjct: 124 FDFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPD 183
Query: 178 GYEINDPSLEDIRHVGLN 195
YEINDPSL+DIRHV LN
Sbjct: 184 SYEINDPSLDDIRHV-LN 200
Score = 595 (214.5 bits), Expect = 3.1e-124, Sum P(3) = 3.1e-124
Identities = 112/130 (86%), Positives = 122/130 (93%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VGLNNI++T+FVNVTIQSLMRVTPLRNFFLIPENY+HCKSPLVHRFG+LTRKIWHARNFK
Sbjct: 231 VGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFK 290
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGE 311
GQVSPHEFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH DLR +K +SII++CFQGE
Sbjct: 291 GQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGE 350
Query: 312 LEVVKEIPKN 321
LEVVKE N
Sbjct: 351 LEVVKEFQGN 360
Score = 57 (25.1 bits), Expect = 3.1e-124, Sum P(3) = 3.1e-124
Identities = 11/12 (91%), Positives = 12/12 (100%)
Query: 366 KDVMEKNIIPQL 377
KDVMEKNIIPQ+
Sbjct: 384 KDVMEKNIIPQV 395
>TAIR|locus:2127490 [details] [associations]
symbol:AT4G22410 species:3702 "Arabidopsis thaliana"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR015880
Pfam:PF00443 Pfam:PF02148 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 SMART:SM00355 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:AL161557
GO:GO:0004221 EMBL:AL033545 HOGENOM:HOG000188754 KO:K12847
UniGene:At.28613 UniGene:At.32552 ProtClustDB:CLSN2685806
IPI:IPI00544117 PIR:F85256 RefSeq:NP_193972.1 UniGene:At.72567
ProteinModelPortal:Q9SUX8 SMR:Q9SUX8 STRING:Q9SUX8
EnsemblPlants:AT4G22410.1 GeneID:828336 KEGG:ath:AT4G22410
TAIR:At4g22410 InParanoid:Q9SUX8 OMA:SHRDFAN PhylomeDB:Q9SUX8
ArrayExpress:Q9SUX8 Genevestigator:Q9SUX8 Uniprot:Q9SUX8
Length = 340
Score = 580 (209.2 bits), Expect = 3.4e-101, Sum P(3) = 3.4e-101
Identities = 110/130 (84%), Positives = 120/130 (92%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VGLNNI++T+FVNVTIQSLMRVTPLRNFF IPENY+HCKSPLVH FG+LTRKIWHARNFK
Sbjct: 116 VGLNNIQKTEFVNVTIQSLMRVTPLRNFFHIPENYQHCKSPLVHCFGELTRKIWHARNFK 175
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGE 311
GQVSPHEFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH DLR +K +SII++CFQGE
Sbjct: 176 GQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGE 235
Query: 312 LEVVKEIPKN 321
LEVVKE N
Sbjct: 236 LEVVKEFQGN 245
Score = 400 (145.9 bits), Expect = 3.4e-101, Sum P(3) = 3.4e-101
Identities = 75/85 (88%), Positives = 78/85 (91%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
V QVLDF FE+FCSVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TE
Sbjct: 2 VEFQVLDFHFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTE 61
Query: 171 KVYCLPDGYEINDPSLEDIRHVGLN 195
KVYCLPD YEINDPSL+DIRHV LN
Sbjct: 62 KVYCLPDSYEINDPSLDDIRHV-LN 85
Score = 57 (25.1 bits), Expect = 3.4e-101, Sum P(3) = 3.4e-101
Identities = 11/12 (91%), Positives = 12/12 (100%)
Query: 366 KDVMEKNIIPQL 377
KDVMEKNIIPQ+
Sbjct: 269 KDVMEKNIIPQV 280
>DICTYBASE|DDB_G0278929 [details] [associations]
symbol:usp39 "putative ubiquitin carboxyl-terminal
hydrolase (UCH)" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR003034
Pfam:PF00443 Pfam:PF02037 Pfam:PF02148 PROSITE:PS50235
PROSITE:PS50271 SMART:SM00513 dictyBase:DDB_G0278929
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.720.30 EMBL:AAFI02000024 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 eggNOG:NOG259163
KO:K12847 RefSeq:XP_647829.1 ProteinModelPortal:Q54XH4
STRING:Q54XH4 EnsemblProtists:DDB0220679 GeneID:8621789
KEGG:ddi:DDB_G0278929 InParanoid:Q54XH4 OMA:EDDNANI Uniprot:Q54XH4
Length = 718
Score = 394 (143.8 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 85/192 (44%), Positives = 119/192 (61%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VGLNNIK T +VNV IQSL R+ +RNF L +N + KSPLV +L RKIW+ +NFK
Sbjct: 394 VGLNNIKNTAYVNVIIQSLARIPTIRNFLLNVDNIKTNKSPLVLTLSELLRKIWNPKNFK 453
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQG 310
QVSPHE LQA+ +S+KRF I S+P++F+ W LNTLH DL TK+ N+SIIY+ F G
Sbjct: 454 AQVSPHELLQAIQNSSQKRFNIRESSDPLDFLPWFLNTLHKDLGGTKQPNSSIIYKAFSG 513
Query: 311 ELEVV--KEIPKNTISGNDQNTEKGSDGGDDHD---NITTETSRXXXXXXXXXXXXXXXX 365
E+++ K IPK+ +D +++ +D G++ + TS+
Sbjct: 514 EIQITTDKPIPKSV---DDDSSDYDNDDGENKKLKTKYSNSTSKQPFLFLTLDLPPKPIF 570
Query: 366 KDVMEKNIIPQL 377
KD +K+IIPQ+
Sbjct: 571 KDDQDKSIIPQI 582
Score = 372 (136.0 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 95 RSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
+ + ++ R+DCPYLDTVNR VLDFDFEK CSVS N NVYACLVCGKY+QG+ Q SHA
Sbjct: 264 KKKQIKTRKDCPYLDTVNRDVLDFDFEKVCSVSFHNHNVYACLVCGKYFQGKSQDSHANY 323
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
H L+ HHV+INL+T+++YCLPD YE+ D SL+DI+++ LN F N I+ L R +
Sbjct: 324 HCLQMDHHVFINLKTQQIYCLPDDYEVIDSSLDDIKYL-LN----PTFTNDQIKELDRNS 378
Query: 215 PL 216
L
Sbjct: 379 KL 380
>ZFIN|ZDB-GENE-030131-966 [details] [associations]
symbol:usp39 "ubiquitin specific peptidase 39"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0048855 "adenohypophysis morphogenesis"
evidence=IMP] [GO:0043484 "regulation of RNA splicing"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR015880
Pfam:PF00443 Pfam:PF02148 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00355 ZFIN:ZDB-GENE-030131-966 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043484 GO:GO:0004221 GO:GO:0048855 EMBL:BX537304
GeneTree:ENSGT00390000007992 OMA:SHINVYA HOVERGEN:HBG079718
IPI:IPI00619151 UniGene:Dr.77033 Ensembl:ENSDART00000061406
InParanoid:A3KQ59 Uniprot:A3KQ59
Length = 497
Score = 388 (141.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 70/107 (65%), Positives = 84/107 (78%)
Query: 86 LANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQG 145
+ GY + +RSR CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QG
Sbjct: 23 VGRGYVEDRRSR------HCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQG 76
Query: 146 RGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
RGQKSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 77 RGQKSHAYIHSVQVAHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV 123
Score = 354 (129.7 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 72/136 (52%), Positives = 91/136 (66%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ NV +Q+L V PLRN+FL ENYR + P LV RFG+L RK+
Sbjct: 156 VGLNNIKANDYANVVLQALSNVPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKL 215
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LH L TKK +SII
Sbjct: 216 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDAVDFLSWFLNALHGALGGTKKKSSII 275
Query: 305 YECFQGELEVV-KEIP 319
+ FQG + + K++P
Sbjct: 276 TKAFQGSMRIFSKKLP 291
>UNIPROTKB|B9A018 [details] [associations]
symbol:USP39 "U4/U6.U5 tri-snRNP-associated protein 2"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR015880
Pfam:PF00443 Pfam:PF02148 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00355 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:AC012454
GO:GO:0004221 EMBL:AC016753 HOGENOM:HOG000188754 HGNC:HGNC:20071
HOVERGEN:HBG079718 IPI:IPI00916833 ProteinModelPortal:B9A018
SMR:B9A018 STRING:B9A018 PRIDE:B9A018 Ensembl:ENST00000409025
ArrayExpress:B9A018 Bgee:B9A018 Uniprot:B9A018
Length = 536
Score = 373 (136.4 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 103 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 162
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 163 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Score = 340 (124.7 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 78/195 (40%), Positives = 110/195 (56%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 225 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 284
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-SI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK +I
Sbjct: 285 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 344
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRXXXXXXXXXXXXX 362
+ + FQG + + K++P + ++ +D ++ E++
Sbjct: 345 VTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND---EYQETMVEST---FMYLTLDLPTA 398
Query: 363 XXXKDVMEKNIIPQL 377
KD E+ IIPQ+
Sbjct: 399 PLYKDEKEQLIIPQV 413
>UNIPROTKB|G5E9H0 [details] [associations]
symbol:USP39 "U4/U6.U5 tri-snRNP-associated protein 2"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR015880
Pfam:PF00443 Pfam:PF02148 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00355 EMBL:CH471053 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:AC012454 GO:GO:0004221 EMBL:AC016753 KO:K12847
UniGene:Hs.654745 GeneID:10713 KEGG:hsa:10713 CTD:10713
HGNC:HGNC:20071 GenomeRNAi:10713 RefSeq:NP_001243655.1
ProteinModelPortal:G5E9H0 SMR:G5E9H0 PRIDE:G5E9H0
Ensembl:ENST00000409766 ArrayExpress:G5E9H0 Bgee:G5E9H0
Uniprot:G5E9H0
Length = 488
Score = 373 (136.4 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 103 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 162
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 163 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Score = 340 (124.7 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 78/195 (40%), Positives = 110/195 (56%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 225 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 284
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-SI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK +I
Sbjct: 285 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 344
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRXXXXXXXXXXXXX 362
+ + FQG + + K++P + ++ +D ++ E++
Sbjct: 345 VTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND---EYQETMVEST---FMYLTLDLPTA 398
Query: 363 XXXKDVMEKNIIPQL 377
KD E+ IIPQ+
Sbjct: 399 PLYKDEKEQLIIPQV 413
>UNIPROTKB|I3LFS1 [details] [associations]
symbol:USP39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR015880 Pfam:PF00443 Pfam:PF02148
PROSITE:PS50271 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00390000007992 EMBL:FP325280
Ensembl:ENSSSCT00000027775 OMA:VEFETDE Uniprot:I3LFS1
Length = 428
Score = 373 (136.4 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 103 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 162
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 163 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Score = 340 (124.7 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 78/195 (40%), Positives = 110/195 (56%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 225 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 284
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-SI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK +I
Sbjct: 285 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 344
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRXXXXXXXXXXXXX 362
+ + FQG + + K++P + ++ +D ++ E++
Sbjct: 345 VTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND---EYQETMVEST---FMYLTLDLPTA 398
Query: 363 XXXKDVMEKNIIPQL 377
KD E+ IIPQ+
Sbjct: 399 PLYKDEKEQLIIPQV 413
>UNIPROTKB|B8ZZD1 [details] [associations]
symbol:USP39 "U4/U6.U5 tri-snRNP-associated protein 2"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR015880
Pfam:PF00443 Pfam:PF02148 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00355 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:AC012454
GO:GO:0004221 EMBL:AC016753 HOGENOM:HOG000188754 HGNC:HGNC:20071
HOVERGEN:HBG079718 IPI:IPI00916761 ProteinModelPortal:B8ZZD1
SMR:B8ZZD1 STRING:B8ZZD1 PRIDE:B8ZZD1 Ensembl:ENST00000409268
ArrayExpress:B8ZZD1 Bgee:B8ZZD1 Uniprot:B8ZZD1
Length = 502
Score = 373 (136.4 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 103 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 162
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 163 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Score = 339 (124.4 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 69/137 (50%), Positives = 91/137 (66%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 225 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 284
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-SI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK +I
Sbjct: 285 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 344
Query: 304 IYECFQGELEV-VKEIP 319
+ + FQG + + K++P
Sbjct: 345 VTDVFQGSMRIFTKKLP 361
>UNIPROTKB|E2QZF6 [details] [associations]
symbol:USP39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR015880 Pfam:PF00443 Pfam:PF02148
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00390000007992 KO:K12847
OMA:SHINVYA CTD:10713 EMBL:AAEX03010937 RefSeq:XP_532977.1
Ensembl:ENSCAFT00000012278 GeneID:475767 KEGG:cfa:475767
NextBio:20851544 Uniprot:E2QZF6
Length = 561
Score = 373 (136.4 bits), Expect = 4.9e-68, Sum P(2) = 4.9e-68
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 99 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 158
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 159 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 188
Score = 340 (124.7 bits), Expect = 4.9e-68, Sum P(2) = 4.9e-68
Identities = 78/195 (40%), Positives = 110/195 (56%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 221 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 280
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-SI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK +I
Sbjct: 281 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 340
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRXXXXXXXXXXXXX 362
+ + FQG + + K++P + ++ +D ++ E++
Sbjct: 341 VTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND---EYQETMVEST---FMYLTLDLPTA 394
Query: 363 XXXKDVMEKNIIPQL 377
KD E+ IIPQ+
Sbjct: 395 PLYKDEKEQLIIPQV 409
>MGI|MGI:107622 [details] [associations]
symbol:Usp39 "ubiquitin specific peptidase 39" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR015880 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00355
MGI:MGI:107622 GO:GO:0005634 GO:GO:0008380 GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 eggNOG:NOG259163
GeneTree:ENSGT00390000007992 HOGENOM:HOG000188754 KO:K12847
OMA:SHINVYA MEROPS:C19.972 CTD:10713 HOVERGEN:HBG079718
OrthoDB:EOG4C5CJ7 EMBL:AK010443 EMBL:AK018595 EMBL:AK033105
EMBL:AK045062 EMBL:AK167668 EMBL:AK165625 EMBL:AK168003
EMBL:AK088354 EMBL:BC026983 IPI:IPI00457815 RefSeq:NP_613058.1
UniGene:Mm.281900 ProteinModelPortal:Q3TIX9 SMR:Q3TIX9
STRING:Q3TIX9 PhosphoSite:Q3TIX9 PaxDb:Q3TIX9 PRIDE:Q3TIX9
Ensembl:ENSMUST00000070345 GeneID:28035 KEGG:mmu:28035
UCSC:uc009cif.1 InParanoid:Q3TIX9 NextBio:306554 Bgee:Q3TIX9
CleanEx:MM_USP39 Genevestigator:Q3TIX9
GermOnline:ENSMUSG00000056305 Uniprot:Q3TIX9
Length = 564
Score = 373 (136.4 bits), Expect = 5.4e-68, Sum P(2) = 5.4e-68
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 102 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 161
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 162 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 191
Score = 340 (124.7 bits), Expect = 5.4e-68, Sum P(2) = 5.4e-68
Identities = 78/195 (40%), Positives = 110/195 (56%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 224 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 283
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-SI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK +I
Sbjct: 284 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 343
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRXXXXXXXXXXXXX 362
+ + FQG + + K++P + ++ +D ++ E++
Sbjct: 344 VNDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND---EYQETMVEST---FMYLTLDLPTA 397
Query: 363 XXXKDVMEKNIIPQL 377
KD E+ IIPQ+
Sbjct: 398 PLYKDEKEQLIIPQV 412
>UNIPROTKB|A6QQX8 [details] [associations]
symbol:USP39 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR015880 Pfam:PF00443 Pfam:PF02148
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 eggNOG:NOG259163
GeneTree:ENSGT00390000007992 HOGENOM:HOG000188754 KO:K12847
OMA:SHINVYA CTD:10713 HOVERGEN:HBG079718 OrthoDB:EOG4C5CJ7
EMBL:DAAA02031136 EMBL:BC150035 IPI:IPI00703951
RefSeq:NP_001094615.1 UniGene:Bt.16651 STRING:A6QQX8
Ensembl:ENSBTAT00000014148 GeneID:532985 KEGG:bta:532985
InParanoid:A6QQX8 NextBio:20875864 Uniprot:A6QQX8
Length = 565
Score = 373 (136.4 bits), Expect = 5.6e-68, Sum P(2) = 5.6e-68
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 103 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 162
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 163 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Score = 340 (124.7 bits), Expect = 5.6e-68, Sum P(2) = 5.6e-68
Identities = 78/195 (40%), Positives = 110/195 (56%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 225 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 284
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-SI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK +I
Sbjct: 285 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 344
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRXXXXXXXXXXXXX 362
+ + FQG + + K++P + ++ +D ++ E++
Sbjct: 345 VTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND---EYQETMVEST---FMYLTLDLPTA 398
Query: 363 XXXKDVMEKNIIPQL 377
KD E+ IIPQ+
Sbjct: 399 PLYKDEKEQLIIPQV 413
>UNIPROTKB|Q53GS9 [details] [associations]
symbol:USP39 "U4/U6.U5 tri-snRNP-associated protein 2"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0006397
"mRNA processing" evidence=TAS] [GO:0000245 "spliceosomal complex
assembly" evidence=TAS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR015880 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00355
GO:GO:0005634 EMBL:CH471053 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:AC012454
GO:GO:0004221 GO:GO:0000245 EMBL:AC016753 eggNOG:NOG259163
KO:K12847 OMA:SHINVYA EMBL:AF353989 EMBL:AF132955 EMBL:AK289451
EMBL:AK295257 EMBL:AK222852 EMBL:BC001384 EMBL:BC067273
EMBL:AF130096 EMBL:AF161450 IPI:IPI00419844 RefSeq:NP_001243654.1
RefSeq:NP_001243656.1 RefSeq:NP_001243657.1 RefSeq:NP_006581.2
UniGene:Hs.654745 ProteinModelPortal:Q53GS9 SMR:Q53GS9
IntAct:Q53GS9 STRING:Q53GS9 MEROPS:C19.972 PhosphoSite:Q53GS9
DMDM:88909655 PaxDb:Q53GS9 PeptideAtlas:Q53GS9 PRIDE:Q53GS9
Ensembl:ENST00000323701 Ensembl:ENST00000409470
Ensembl:ENST00000450066 GeneID:10713 KEGG:hsa:10713 UCSC:uc002sqb.3
CTD:10713 GeneCards:GC02P085829 HGNC:HGNC:20071 HPA:HPA034823
MIM:611594 neXtProt:NX_Q53GS9 PharmGKB:PA134905136
HOVERGEN:HBG079718 InParanoid:Q53GS9 OrthoDB:EOG4C5CJ7
PhylomeDB:Q53GS9 GenomeRNAi:10713 NextBio:40671 ArrayExpress:Q53GS9
Bgee:Q53GS9 CleanEx:HS_USP39 Genevestigator:Q53GS9
GermOnline:ENSG00000168883 Uniprot:Q53GS9
Length = 565
Score = 373 (136.4 bits), Expect = 5.6e-68, Sum P(2) = 5.6e-68
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 103 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 162
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 163 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Score = 340 (124.7 bits), Expect = 5.6e-68, Sum P(2) = 5.6e-68
Identities = 78/195 (40%), Positives = 110/195 (56%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 225 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 284
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-SI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK +I
Sbjct: 285 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 344
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRXXXXXXXXXXXXX 362
+ + FQG + + K++P + ++ +D ++ E++
Sbjct: 345 VTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND---EYQETMVEST---FMYLTLDLPTA 398
Query: 363 XXXKDVMEKNIIPQL 377
KD E+ IIPQ+
Sbjct: 399 PLYKDEKEQLIIPQV 413
>RGD|1308103 [details] [associations]
symbol:Usp39 "ubiquitin specific peptidase 39" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR015880 Pfam:PF00443 Pfam:PF02148 PROSITE:PS50235
PROSITE:PS50271 SMART:SM00355 RGD:1308103 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0008233 GO:GO:0004221 EMBL:CH473957
eggNOG:NOG259163 GeneTree:ENSGT00390000007992 HOGENOM:HOG000188754
OMA:SHINVYA HOVERGEN:HBG079718 OrthoDB:EOG4C5CJ7 EMBL:BC166516
IPI:IPI00869569 UniGene:Rn.50051 STRING:B2GV41
Ensembl:ENSRNOT00000015562 UCSC:RGD:1308103 Genevestigator:B2GV41
Uniprot:B2GV41
Length = 564
Score = 373 (136.4 bits), Expect = 6.9e-68, Sum P(2) = 6.9e-68
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 102 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 161
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 162 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 191
Score = 339 (124.4 bits), Expect = 6.9e-68, Sum P(2) = 6.9e-68
Identities = 69/137 (50%), Positives = 91/137 (66%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 224 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 283
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-SI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK +I
Sbjct: 284 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 343
Query: 304 IYECFQGELEV-VKEIP 319
+ + FQG + + K++P
Sbjct: 344 VNDVFQGSMRIFTKKLP 360
>FB|FBgn0030969 [details] [associations]
symbol:CG7288 species:7227 "Drosophila melanogaster"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001394 InterPro:IPR001607 Pfam:PF00443 Pfam:PF02148
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 EMBL:AE014298
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0071011 GO:GO:0000398 GO:GO:0004221 eggNOG:NOG259163
GeneTree:ENSGT00390000007992 KO:K12847 OMA:SHINVYA EMBL:AY061442
RefSeq:NP_573334.1 UniGene:Dm.7243 SMR:Q9VWP1 STRING:Q9VWP1
EnsemblMetazoa:FBtr0074643 GeneID:32881 KEGG:dme:Dmel_CG7288
UCSC:CG7288-RA FlyBase:FBgn0030969 InParanoid:Q9VWP1
OrthoDB:EOG4PG4G9 ChiTaRS:CG7288 GenomeRNAi:32881 NextBio:780857
Uniprot:Q9VWP1
Length = 494
Score = 362 (132.5 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 63/93 (67%), Positives = 77/93 (82%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHVGLN 195
V++NL T + YCLPD YEI D SL+DI++V LN
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYV-LN 127
Score = 334 (122.6 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 67/137 (48%), Positives = 93/137 (67%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ NV + +L V PLR++FL ++Y H P LV RFG+L RK+
Sbjct: 159 VGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVRPPGDSVFTLVQRFGELMRKM 218
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSI 303
W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ K N+SI
Sbjct: 219 WNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKHPNSSI 278
Query: 304 IYECFQGELEV-VKEIP 319
+Y+ F GE+++ +++P
Sbjct: 279 LYKIFLGEMKIYTRKMP 295
>WB|WBGene00017280 [details] [associations]
symbol:usp-39 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR001394 InterPro:IPR001607 Pfam:PF00443 Pfam:PF02148
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0046872 GO:GO:0008270 GO:GO:0040011 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
eggNOG:NOG259163 GeneTree:ENSGT00390000007992 HOGENOM:HOG000188754
KO:K12847 OMA:SHINVYA EMBL:FO081097 PIR:D88077 PIR:T42401
RefSeq:NP_494298.1 ProteinModelPortal:O44787 SMR:O44787
STRING:O44787 PaxDb:O44787 EnsemblMetazoa:F09D1.1 GeneID:173606
KEGG:cel:CELE_F09D1.1 UCSC:F09D1.1 CTD:173606 WormBase:F09D1.1
InParanoid:O44787 NextBio:880353 Uniprot:O44787
Length = 602
Score = 376 (137.4 bits), Expect = 2.1e-64, Sum P(3) = 2.1e-64
Identities = 65/90 (72%), Positives = 78/90 (86%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+VCGKY+QGRG +HAYTH+LE HH
Sbjct: 134 RMCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACMVCGKYFQGRGTNTHAYTHALETDHH 193
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL+T K YCLPD YE+ DPSLEDI++V
Sbjct: 194 VFLNLQTLKFYCLPDNYEVIDPSLEDIKYV 223
Score = 286 (105.7 bits), Expect = 2.1e-64, Sum P(3) = 2.1e-64
Identities = 64/148 (43%), Positives = 86/148 (58%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL NY K P L RFG+L RK+
Sbjct: 256 VGLNNIKANDYCNAILQALSAVRPLRNWFLKESNYTSIKRPPGDKLTLLPQRFGELIRKL 315
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W+ R + VSPHE LQAV+ S K+F+ Q++ +FM +LL TLHS L T K SII
Sbjct: 316 WNPRALRTHVSPHEMLQAVVVCSNKKFQFIKQNDAADFMLFLLTTLHSALNGTDKKPSII 375
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEK 332
+ F+G + ++ + I D + EK
Sbjct: 376 SKTFRGRM---RQYSRRVIPAEDTDEEK 400
Score = 37 (18.1 bits), Expect = 2.1e-64, Sum P(3) = 2.1e-64
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 366 KDVMEKNIIPQL 377
+DV +NIIPQ+
Sbjct: 432 RDVQLQNIIPQV 443
>UNIPROTKB|G4MZ61 [details] [associations]
symbol:MGG_08169 "U4/U6.U5 tri-snRNP-associated protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001394
InterPro:IPR001607 Pfam:PF00443 Pfam:PF02148 PROSITE:PS50235
PROSITE:PS50271 SMART:SM00290 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:CM001232
GO:GO:0004221 KO:K12847 RefSeq:XP_003715141.1
ProteinModelPortal:G4MZ61 EnsemblFungi:MGG_08169T0 GeneID:2678373
KEGG:mgr:MGG_08169 Uniprot:G4MZ61
Length = 563
Score = 362 (132.5 bits), Expect = 6.6e-64, Sum P(2) = 6.6e-64
Identities = 62/86 (72%), Positives = 76/86 (88%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTV+R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+L+ HHV+IN
Sbjct: 103 YLDTVDRNVLDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALDENHHVFIN 162
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV 192
++T+KVY LP+GYE+ SL+D+++V
Sbjct: 163 MQTQKVYVLPEGYEVRSSSLDDVKYV 188
Score = 314 (115.6 bits), Expect = 6.6e-64, Sum P(2) = 6.6e-64
Identities = 64/125 (51%), Positives = 83/125 (66%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VG+NNIKE D++NV +Q+L V PLRNFFL+ E+ +S LV R L RKIW+ R FK
Sbjct: 223 VGMNNIKENDYLNVVVQALAHVPPLRNFFLL-EDLSQSQSELVRRTATLFRKIWNPRAFK 281
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L TK +S++ FQ
Sbjct: 282 AHVSPHELLQEVSLRSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSRTKPGSSMVQRVFQ 341
Query: 310 GELEV 314
G+++V
Sbjct: 342 GKVKV 346
>ASPGD|ASPL0000076083 [details] [associations]
symbol:AN4458 species:162425 "Emericella nidulans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 Pfam:PF00443 Pfam:PF02148 PROSITE:PS50235
PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 EMBL:BN001303 GO:GO:0004221
HOGENOM:HOG000188754 EnsemblFungi:CADANIAT00005994 OMA:ANRESII
Uniprot:C8V8I3
Length = 616
Score = 357 (130.7 bits), Expect = 3.6e-61, Sum P(2) = 3.6e-61
Identities = 61/86 (70%), Positives = 76/86 (88%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KS+AY H+LE HHV+IN
Sbjct: 111 YLDTINRHILDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSYAYFHALEVSHHVFIN 170
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV 192
+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 171 MGTKKVYVLPEGYEVKNKSLDDIKYV 196
Score = 298 (110.0 bits), Expect = 3.6e-61, Sum P(2) = 3.6e-61
Identities = 64/142 (45%), Positives = 86/142 (60%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VG+NNIK D++NV Q+L V P+RN+FL+ E + LV RFG L RK+W+ + F+
Sbjct: 229 VGMNNIKANDYLNVVAQALAHVLPIRNYFLLHEFPQPGTPQLVLRFGTLVRKLWNPKAFR 288
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN----TSIIYEC 307
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L ++K TS+++
Sbjct: 289 SHVSPHELLQEVALRSSKRFTLTQQSDPVEFLSWFLNNLHLALGGSRKPSKTPTSVVHAA 348
Query: 308 FQGELEVVKEIPKNTISGNDQN 329
FQG L + E T + QN
Sbjct: 349 FQGHLRI--ESQAITAHSDTQN 368
>UNIPROTKB|F1SVB4 [details] [associations]
symbol:LOC100523728 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR015880 Pfam:PF00443 Pfam:PF02148
PROSITE:PS50271 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00390000007992 EMBL:CU928286
Ensembl:ENSSSCT00000009018 Uniprot:F1SVB4
Length = 325
Score = 373 (136.4 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 103 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 162
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 163 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Score = 245 (91.3 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 50/92 (54%), Positives = 62/92 (67%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 225 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 284
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
W+ RNFK VSPHE LQAV+ SKK F+I Q
Sbjct: 285 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQ 316
>CGD|CAL0003935 [details] [associations]
symbol:orf19.7265 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
Pfam:PF00443 Pfam:PF02148 PROSITE:PS50271 CGD:CAL0003935
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 EMBL:AACQ01000092 eggNOG:NOG259163 KO:K12847
RefSeq:XP_715062.1 ProteinModelPortal:Q59ZS6 STRING:Q59ZS6
GeneID:3643327 KEGG:cal:CaO19.7265 Uniprot:Q59ZS6
Length = 242
Score = 222 (83.2 bits), Expect = 8.6e-39, Sum P(2) = 8.6e-39
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
+NR+VLDFDF K CS +LS+ NVYACL CGKY++GR S AY H++ H +Y++ TE
Sbjct: 15 INREVLDFDFAKICSQTLSSTNVYACLACGKYFEGRSPSSPAYKHAVSTNHQMYMSFATE 74
Query: 171 KVYCLPDGYEINDPSLEDI 189
K Y LP E++ P ++D+
Sbjct: 75 KFYELPQDREVS-P-VQDV 91
Score = 212 (79.7 bits), Expect = 8.6e-39, Sum P(2) = 8.6e-39
Identities = 50/128 (39%), Positives = 73/128 (57%)
Query: 189 IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--PENYRHCKSPLVHRFGDLTRKIWH 246
+ +VGLNNIK+ D+ NV +Q L + P+RN++L+ P N PL G L RK+W
Sbjct: 120 VGYVGLNNIKKNDYANVVVQVLAHIEPVRNYYLLETPTN------PLNVHLGLLIRKMWS 173
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYE 306
FK ++PHEF+ +V + SKKRF + + +P F+ WLLN R YE
Sbjct: 174 PHLFKSHIAPHEFMNSVSEESKKRFTLE-KGHPKSFLLWLLN------RGGP------YE 220
Query: 307 CFQGELEV 314
C +G++EV
Sbjct: 221 CLRGKVEV 228
>UNIPROTKB|C9JIU2 [details] [associations]
symbol:USP39 "U4/U6.U5 tri-snRNP-associated protein 2"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 InterPro:IPR015880 Pfam:PF02148 PROSITE:PS50271
SMART:SM00355 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC012454 EMBL:AC016753 HGNC:HGNC:20071
IPI:IPI00927463 ProteinModelPortal:C9JIU2 SMR:C9JIU2 STRING:C9JIU2
Ensembl:ENST00000448971 ArrayExpress:C9JIU2 Bgee:C9JIU2
Uniprot:C9JIU2
Length = 129
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 84
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 85 VFLNLHTLKFYCLPDNYEIIDSSLEDITYV 114
>POMBASE|SPBC577.07 [details] [associations]
symbol:ubp10 "ubiquitin C-terminal hydrolase Ubp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR001394 InterPro:IPR001607 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PomBase:SPBC577.07 GO:GO:0005634 GO:GO:0046872 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0005681
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0004221 GO:GO:0045292 eggNOG:NOG259163 HOGENOM:HOG000188754
KO:K12847 OMA:SHINVYA OrthoDB:EOG44QX88 PIR:T40551
RefSeq:NP_595305.1 ProteinModelPortal:Q9USR2 STRING:Q9USR2
EnsemblFungi:SPBC577.07.1 GeneID:2540864 KEGG:spo:SPBC577.07
NextBio:20801980 Uniprot:Q9USR2
Length = 502
Score = 317 (116.6 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 61/120 (50%), Positives = 85/120 (70%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSVSL+NL+VYACLVCG+Y+QGRG SHAY H+L HHV++N
Sbjct: 60 YLDTINRKLLDFDFEKVCSVSLTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVN 119
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
T K Y LP+ Y++ +L+DI +V ++ T F + +Q L TP ++ L+ + Y
Sbjct: 120 CSTLKFYVLPESYQVESSALQDIAYV----MRPT-FTKLEVQRLDH-TPQLSYDLMLKPY 173
Score = 282 (104.3 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 71/191 (37%), Positives = 100/191 (52%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VG+NNIK D+ NV I L V P RN+FL+ +N+ +C LV R L RK+W+ + FK
Sbjct: 178 VGMNNIKNNDYFNVVIHMLAHVKPFRNYFLL-KNFDNCPQ-LVQRLAILIRKLWNHKAFK 235
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYEC 307
VSP E +Q V S K++ I Q +PVEF+SW LNTLH+ L K K TSI++
Sbjct: 236 SHVSPQELIQEVTVLSHKKYSINEQKDPVEFLSWFLNTLHNCLGGKKSTIAKPTSIVHYS 295
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRXXXXXXXXXXXXXXXXKD 367
FQG + + + + Q+ EKG D + +T+ +D
Sbjct: 296 FQGFVRIESQKIR-------QHAEKGEQVVFTGDRVI-QTNVVPFLYLTLDLPPKPIFQD 347
Query: 368 VMEKNIIPQLQ 378
E NIIPQ++
Sbjct: 348 EFEGNIIPQVE 358
>SGD|S000001901 [details] [associations]
symbol:SAD1 "Conserved zinc-finger domain protein involved in
pre-mRNA splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 Pfam:PF00443 Pfam:PF02148
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 SGD:S000001901
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:D50617 EMBL:BK006940
GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0000398 GO:GO:0004221 EMBL:AY692766 PIR:S56260
RefSeq:NP_116660.1 ProteinModelPortal:P43589 STRING:P43589
PaxDb:P43589 PeptideAtlas:P43589 EnsemblFungi:YFR005C GeneID:850555
KEGG:sce:YFR005C CYGD:YFR005c eggNOG:NOG259163
GeneTree:ENSGT00390000007992 HOGENOM:HOG000188754 KO:K12847
OMA:SHINVYA OrthoDB:EOG44QX88 NextBio:966342 Genevestigator:P43589
GermOnline:YFR005C Uniprot:P43589
Length = 448
Score = 242 (90.2 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 49/92 (53%), Positives = 62/92 (67%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGHYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHVGLNNIK 198
L + K Y LP +I L D LN+IK
Sbjct: 91 LTSLKFYMLPQNVQI----LHDGEVQLLNSIK 118
Score = 111 (44.1 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
+G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 150 IGFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFK 207
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECF 308
+S +F+ S + R G+ NP++ F+ WL N + S + K SI+
Sbjct: 208 HHLSVDDFV------SYLKVREGLNLNPIDPRLFLLWLFNKICSSSNDLK---SILNHSC 258
Query: 309 QGELEVVK 316
+G++++ K
Sbjct: 259 KGKVKIAK 266
>UNIPROTKB|C9J0X5 [details] [associations]
symbol:USP39 "U4/U6.U5 tri-snRNP-associated protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012454
EMBL:AC016753 HGNC:HGNC:20071 IPI:IPI00916869
ProteinModelPortal:C9J0X5 SMR:C9J0X5 STRING:C9J0X5
Ensembl:ENST00000442708 ArrayExpress:C9J0X5 Bgee:C9J0X5
Uniprot:C9J0X5
Length = 113
Score = 175 (66.7 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 32/48 (66%), Positives = 37/48 (77%)
Query: 145 GRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
GRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 42 GRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV 89
Score = 51 (23.0 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 103 RDCPYLDTVN 112
R CPYLDT+N
Sbjct: 25 RHCPYLDTIN 34
>TAIR|locus:2127505 [details] [associations]
symbol:AT4G22420 "AT4G22420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] PROSITE:PS50181 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161557 EMBL:AL033545
eggNOG:NOG237838 IPI:IPI00516374 PIR:G85256 RefSeq:NP_193973.1
UniGene:At.54474 EnsemblPlants:AT4G22420.1 GeneID:828337
KEGG:ath:AT4G22420 TAIR:At4g22420 PhylomeDB:Q9SUX7
Genevestigator:Q9SUX7 Uniprot:Q9SUX7
Length = 184
Score = 160 (61.4 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 44/106 (41%), Positives = 51/106 (48%)
Query: 21 KVVEQSSPSPPRLGFENPLLPLANTYXXXXXXXXYG-----GRGDSGAKVGQNGR--TGX 73
+V+E+S PP LGF N LLPLAN Y R + AK NG G
Sbjct: 41 RVIERSDSPPPPLGFNNHLLPLANAYDDDDEEEGNELKKSQARRNGVAKGEGNGNKVNGE 100
Query: 74 XXXXXXXXXXXXLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFD 119
G+G+ SR VEVRRDCPYLDTVNRQV+ D
Sbjct: 101 AQEEVDDEEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVIIID 146
>UNIPROTKB|F1LRN2 [details] [associations]
symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0001664 "G-protein coupled
receptor binding" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0007411 GO:GO:0016477
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
GO:GO:0004197 GO:GO:0044297 GO:GO:0004221 IPI:IPI00949514
Ensembl:ENSRNOT00000016022 ArrayExpress:F1LRN2 Uniprot:F1LRN2
Length = 919
Score = 121 (47.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 42/152 (27%), Positives = 67/152 (44%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNF 250
GL NI T ++N +Q+L PL FFL R K P + + + L ++WH ++
Sbjct: 172 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSR 230
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG 310
G V P Q + K FR Q + EF+ L++ LH +L+ +
Sbjct: 231 PGSVVPANLFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEIEEEPQALTS 289
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDN 342
E E V+E K+ + Q+ E S + +N
Sbjct: 290 E-ETVEE-EKSQSDVDFQSCESCSSSSEKGEN 319
Score = 96 (38.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKF---CS-VSLSNLNVYACLVCGKYYQGRGQ- 148
+ ++ R CP+LD+V + +K C + N++ACL Y G G+
Sbjct: 15 KNKKMTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNLWACLENRCSYVGCGES 74
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI 181
+ H+ HS + H++ +NL T +V+C E+
Sbjct: 75 QDHSTIHSKKTKHYLTVNLTTLRVWCYACSKEV 107
>UNIPROTKB|F1LRS9 [details] [associations]
symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
SMART:SM00695 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
IPI:IPI01016284 Ensembl:ENSRNOT00000016290 ArrayExpress:F1LRS9
Uniprot:F1LRS9
Length = 839
Score = 121 (47.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 42/152 (27%), Positives = 67/152 (44%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNF 250
GL NI T ++N +Q+L PL FFL R K P + + + L ++WH ++
Sbjct: 167 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSR 225
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG 310
G V P Q + K FR Q + EF+ L++ LH +L+ +
Sbjct: 226 PGSVVPANLFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEIEEEPQALTS 284
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDN 342
E E V+E K+ + Q+ E S + +N
Sbjct: 285 E-ETVEE-EKSQSDVDFQSCESCSSSSEKGEN 314
Score = 95 (38.5 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF---CS-VSLSNLNVYACLVCGKYYQGRGQ-KSH 151
++ R CP+LD+V + +K C + N++ACL Y G G+ + H
Sbjct: 13 KMTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNLWACLENRCSYVGCGESQDH 72
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEI 181
+ HS + H++ +NL T +V+C E+
Sbjct: 73 STIHSKKTKHYLTVNLTTLRVWCYACSKEV 102
>UNIPROTKB|F1P6Y2 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0008277 "regulation of G-protein coupled receptor protein
signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:AAEX03004889
Ensembl:ENSCAFT00000032445 Uniprot:F1P6Y2
Length = 947
Score = 116 (45.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNF 250
GL NI T ++N +Q+L PL FFL R K P + + + L ++WH ++
Sbjct: 186 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSR 244
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
G V P Q + K FR Q + EF+ L++ LH +L+
Sbjct: 245 PGSVVPTTLFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288
Score = 101 (40.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 96 SRLVEVRRDCPYLDTVNRQVLDFDFEKF---CS-VSLSNLNVYACLV--CGKYYQGRGQK 149
+R+ R CP+LD+V + +K C + N++ACL C G Q
Sbjct: 30 NRMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNLWACLENRCSYVGCGESQV 89
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI 181
H+ HS E H++ +NL T +V+C E+
Sbjct: 90 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEV 121
>MGI|MGI:2159711 [details] [associations]
symbol:Usp33 "ubiquitin specific peptidase 33" species:10090
"Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0008152 "metabolic
process" evidence=ISA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0008277 "regulation of G-protein coupled receptor protein
signaling pathway" evidence=ISO] [GO:0016477 "cell migration"
evidence=IMP] [GO:0016579 "protein deubiquitination" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0044297 "cell
body" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
[GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 MGI:MGI:2159711 GO:GO:0048471
GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 HSSP:Q93009
eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
OrthoDB:EOG4B8JC9 EMBL:AF383174 EMBL:BC005506 EMBL:BC031366
EMBL:BC089315 EMBL:AK143844 IPI:IPI00319995 IPI:IPI00798461
RefSeq:NP_001239415.1 RefSeq:NP_573510.2 UniGene:Mm.258320
ProteinModelPortal:Q8R5K2 SMR:Q8R5K2 STRING:Q8R5K2
PhosphoSite:Q8R5K2 PaxDb:Q8R5K2 PRIDE:Q8R5K2 DNASU:170822
Ensembl:ENSMUST00000026507 Ensembl:ENSMUST00000117492 GeneID:170822
KEGG:mmu:170822 UCSC:uc008rti.1 UCSC:uc008rtj.1 InParanoid:Q8R5K2
NextBio:370477 Bgee:Q8R5K2 Genevestigator:Q8R5K2 Uniprot:Q8R5K2
Length = 909
Score = 119 (46.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 44/164 (26%), Positives = 68/164 (41%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNF 250
GL NI T ++N +Q+L PL FFL R K P + + + L ++WH ++
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSR 213
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG 310
G V P Q + K FR Q + EF+ L++ LH +L+ +
Sbjct: 214 PGSVVPANLFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQTLTS 272
Query: 311 ELEVVKEIPKNTI---------SGNDQNTEKGSDGGDDHDNITT 345
E V +E ++ + S E GS G + N TT
Sbjct: 273 EETVEEEKSQSDVDFQSCESCSSSEKAENESGSKGFPEDSNETT 316
Score = 97 (39.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF---CS-VSLSNLNVYACLV--CGKYYQGRGQKSHAYTH 155
R CP+LD+V + +K C + N++ACL C G Q H+ H
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI 181
S E H++ +NL T +V+C E+
Sbjct: 65 SQETKHYLTVNLTTLRVWCYACSKEV 90
>UNIPROTKB|I3L7M6 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
deubiquitination" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0008277 "regulation of G-protein coupled receptor protein
signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:CU915644
Ensembl:ENSSSCT00000026836 Uniprot:I3L7M6
Length = 901
Score = 121 (47.7 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHRFGDLTRKIWHARNFK 251
GL NI T ++N +Q+L PL FFL R K P + L ++WH ++
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPACKSYLKLMTELWH-KSRP 213
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
G V P Q + K FR Q + EF+ L++ LH +L+
Sbjct: 214 GSVVPTNLFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 256
Score = 96 (38.9 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF--C--SVSLSNLNVYACLV--CGKYYQGRGQKSHAYTH 155
R CP+LD+V + +K C + N++ACL C G Q H+ H
Sbjct: 5 RSHCPHLDSVGEITKEDLIQKSHGCCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI 181
S E H++ +NL T +V+C E+
Sbjct: 65 SQETKHYLTVNLTTLRVWCYACSKEV 90
Score = 39 (18.8 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
+GEL+ ++ T+ N Q T K G + IT
Sbjct: 346 EGELDKDRDSVSETVDLNSQETVKVQIHGRASEYIT 381
>ZFIN|ZDB-GENE-040426-2323 [details] [associations]
symbol:usp33 "ubiquitin specific peptidase 33"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016477 "cell migration"
evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
protein signaling pathway" evidence=ISS] [GO:0007411 "axon
guidance" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695
ZFIN:ZDB-GENE-040426-2323 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
OrthoDB:EOG4B8JC9 EMBL:BX649634 EMBL:BC066557 IPI:IPI00512747
RefSeq:NP_998392.1 UniGene:Dr.32515 ProteinModelPortal:A5PMR2
SMR:A5PMR2 Ensembl:ENSDART00000018114 GeneID:406508 KEGG:dre:406508
NextBio:20818084 ArrayExpress:A5PMR2 Bgee:A5PMR2 Uniprot:A5PMR2
Length = 897
Score = 117 (46.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 34/105 (32%), Positives = 49/105 (46%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LVHRFGDLTRKIWHARNF 250
GL NI T ++N +Q+L PL FFL + K P L + L +WH +N
Sbjct: 157 GLKNIGNTCYMNAALQALSNCPPLTQFFLECGGLVKTDKKPALCKSYQKLITDLWH-KNR 215
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
V P Q + KA FR Q + EF+ L++ LH +L+
Sbjct: 216 NAYVVPTNLFQGI-KAVNPMFRGYSQQDSQEFLRCLMDQLHEELK 259
Score = 98 (39.6 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 104 DCPYLDTVNRQVLDFDFEKF---CS-VSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSL 157
DCP+L+ V + +K C + N++ACL G Y G G+ H+ HS
Sbjct: 8 DCPHLECVGEITKEELIQKSHGQCQDCKVGGPNLWACLENGCSYVGCGESHADHSTVHSQ 67
Query: 158 EAGHHVYINLRTEKVYC 174
E H++ +NL T +V+C
Sbjct: 68 ETRHNLTVNLTTLRVWC 84
>UNIPROTKB|E1BWB2 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008277
"regulation of G-protein coupled receptor protein signaling
pathway" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0044297 "cell body" evidence=IEA] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA] [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
SMART:SM00695 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0044297
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11848 CTD:23032
EMBL:AADN02012750 IPI:IPI00598742 RefSeq:XP_422389.2
UniGene:Gga.26668 ProteinModelPortal:E1BWB2
Ensembl:ENSGALT00000014598 GeneID:424553 KEGG:gga:424553
NextBio:20826873 Uniprot:E1BWB2
Length = 910
Score = 127 (49.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-F 237
E+ + L+ GL NI T ++N +Q+L PL +FFL R K P + + +
Sbjct: 140 EVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDCGGLARTDKKPAICKSY 199
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
L ++WH +N G V P Q + K+ FR Q + EF+ L++ LH +L+
Sbjct: 200 LKLMTELWH-KNRPGSVVPTGLFQGI-KSVNPTFRGYSQQDAQEFLRCLMDLLHEELK 255
Score = 87 (35.7 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 104 DCPYLDTVNRQVLDFDFEKF---CS-VSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSL 157
+CP+L++V + +K C + N++ACL Y G G+ H+ THS
Sbjct: 7 NCPHLESVGEITKEELIQKSHGSCQDCKVRGPNLWACLENRCTYVGCGETHVDHSTTHSQ 66
Query: 158 EAGHHVYINLRTEKVYCLPDGYEI 181
E H + +NL T +V+C E+
Sbjct: 67 ETKHCLTVNLTTLRVWCYACSKEV 90
>UNIPROTKB|F1LPJ7 [details] [associations]
symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0001664 "G-protein coupled
receptor binding" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000101718 OMA:TMEEDKS
IPI:IPI00369811 Ensembl:ENSRNOT00000066125 ArrayExpress:F1LPJ7
Uniprot:F1LPJ7
Length = 909
Score = 121 (47.7 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 42/152 (27%), Positives = 67/152 (44%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNF 250
GL NI T ++N +Q+L PL FFL R K P + + + L ++WH ++
Sbjct: 154 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSR 212
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG 310
G V P Q + K FR Q + EF+ L++ LH +L+ +
Sbjct: 213 PGSVVPANLFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEIEEEPQALTS 271
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDN 342
E E V+E K+ + Q+ E S + +N
Sbjct: 272 E-ETVEE-EKSQSDVDFQSCESCSSSSEKGEN 301
Score = 93 (37.8 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF---CS-VSLSNLNVYACLVCGKYYQGRGQ-KSHAYTHS 156
R CP+LD+V + +K C + N++ACL Y G G+ + H+ HS
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNLWACLENRCSYVGCGESQDHSTIHS 64
Query: 157 LEAGHHVYINLRTEKVYCLPDGYEI 181
+ H++ +NL T +V+C E+
Sbjct: 65 KKTKHYLTVNLTTLRVWCYACSKEV 89
>UNIPROTKB|J9NW59 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
EMBL:AAEX03004889 Ensembl:ENSCAFT00000045024 Uniprot:J9NW59
Length = 912
Score = 116 (45.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNF 250
GL NI T ++N +Q+L PL FFL R K P + + + L ++WH ++
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSR 213
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
G V P Q + K FR Q + EF+ L++ LH +L+
Sbjct: 214 PGSVVPTTLFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
Score = 97 (39.2 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF---CS-VSLSNLNVYACLV--CGKYYQGRGQKSHAYTH 155
R CP+LD+V + +K C + N++ACL C G Q H+ H
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI 181
S E H++ +NL T +V+C E+
Sbjct: 65 SQETKHYLTVNLTTLRVWCYACSKEV 90
>ZFIN|ZDB-GENE-040426-1219 [details] [associations]
symbol:usp20 "ubiquitin specific protease 20"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
"protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
"protein K48-linked deubiquitination" evidence=ISS] [GO:0021551
"central nervous system morphogenesis" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 ZFIN:ZDB-GENE-040426-1219
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 GO:GO:0021551
GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:BX927184
IPI:IPI00920034 Ensembl:ENSDART00000006021 ArrayExpress:F1QTS8
Bgee:F1QTS8 Uniprot:F1QTS8
Length = 913
Score = 108 (43.1 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 39/160 (24%), Positives = 67/160 (41%)
Query: 177 DGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LV 234
+G E + L+ G+ NI + ++N +Q+L PL FF R K P L
Sbjct: 133 EGSESEEDELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFQDCSGLVRTDKKPALC 192
Query: 235 HRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+ L ++WH + V P + K FR Q + EF+ L++ LH +L
Sbjct: 193 KSYQKLISELWHKKR-PSYVVPTTLFHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEEL 250
Query: 295 RNTKKNTSIIYECFQGELEVVKEIPK---NTISGNDQNTE 331
+ +++C G EV ++ N + G+ +E
Sbjct: 251 KEP------LFDCSGGISEVEPDLSLDSCNLVDGDRSPSE 284
Score = 95 (38.5 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 105 CPYLDTVNRQVLDFDFEKF---C-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD++ + +K C S + N++ACL C Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEELIQKSKGTCQSCGVGGPNLWACLQCDCPYVGCGESYSDHSTIHAQA 67
Query: 159 AGHHVYINLRTEKVYC 174
H++ +NL T +V+C
Sbjct: 68 KKHNLTVNLTTFRVWC 83
>UNIPROTKB|F1PD56 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA] [GO:0008277 "regulation
of G-protein coupled receptor protein signaling pathway"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0004221 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
OMA:ADYGQIS EMBL:AAEX03006844 RefSeq:XP_537816.3
Ensembl:ENSCAFT00000031793 GeneID:480696 KEGG:cfa:480696
Uniprot:F1PD56
Length = 915
Score = 108 (43.1 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 33/118 (27%), Positives = 51/118 (43%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LVHRF 237
E D L+ G+ N+ + ++N +Q+L PL FFL R K P L +
Sbjct: 133 ESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSY 192
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
L ++WH R V P + K FR Q + EF+ L++ LH +L+
Sbjct: 193 QKLVSEVWHRRR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLCCLMDQLHEELK 248
Score = 95 (38.5 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 103 RD-CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
RD CP+LD+ V ++ L F + C S ++ N++ACL Y G G+ H+ H
Sbjct: 5 RDFCPHLDSIGEVTKEDLLFKSKGACQSCGVTGPNLWACLQVACPYVGCGESFADHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYC 174
+ H++ +NL T +V+C
Sbjct: 65 AQAKKHNLTVNLTTFRVWC 83
>WB|WBGene00013506 [details] [associations]
symbol:usp-3 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 EMBL:AL132902 GeneTree:ENSGT00690000102047
MEROPS:C19.026 RefSeq:NP_493434.3 ProteinModelPortal:Q9GRV2
SMR:Q9GRV2 PaxDb:Q9GRV2 EnsemblMetazoa:Y71A12B.9 GeneID:190579
KEGG:cel:CELE_Y71A12B.9 UCSC:Y71A12B.9 CTD:190579
WormBase:Y71A12B.9 HOGENOM:HOG000020065 NextBio:946258
Uniprot:Q9GRV2
Length = 550
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 35/118 (29%), Positives = 62/118 (52%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP---ENYRHC-KSPLVH-RFGDLT---RKI 244
G+ N+ T F+N +Q+L ++ R + + E+Y H K P + LT RK+
Sbjct: 230 GMRNVGNTCFMNAVLQALASISEFREYIMSLSSLEDYIHDEKEPKNGGNYCYLTDEYRKL 289
Query: 245 W---HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
AR+F+ +P+EF +A + RFR Q + EFM + +++LH+++R +K
Sbjct: 290 LISQSARSFREPTAPNEFREAFISVCP-RFRGFRQHDSHEFMRYFMDSLHTEMRKCRK 346
Score = 86 (35.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 123 FCSVSLSNLNV-YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI 181
FC N N CL CG+ GR HA H E H V I+ + ++YC E+
Sbjct: 52 FCD-ECDNCNKSLMCLTCGRILCGRNDSGHALHHFEETSHPVVIDCISFELYCYSCDDEV 110
Query: 182 N---DPSL 186
+ +PSL
Sbjct: 111 SLDFEPSL 118
>UNIPROTKB|A7Z056 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
protein signaling pathway" evidence=ISS] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0071108 "protein
K48-linked deubiquitination" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0001664 "G-protein coupled
receptor binding" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
EMBL:BC153254 IPI:IPI00700030 RefSeq:NP_001098803.1
UniGene:Bt.26746 ProteinModelPortal:A7Z056 SMR:A7Z056 STRING:A7Z056
PRIDE:A7Z056 Ensembl:ENSBTAT00000027070 GeneID:505839
KEGG:bta:505839 CTD:10868 GeneTree:ENSGT00690000101718
HOGENOM:HOG000286031 HOVERGEN:HBG054196 InParanoid:A7Z056 KO:K11848
OMA:ADYGQIS OrthoDB:EOG4D52WZ NextBio:20867329 ArrayExpress:A7Z056
Uniprot:A7Z056
Length = 912
Score = 106 (42.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/118 (27%), Positives = 51/118 (43%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LVHRF 237
E D L+ G+ N+ + ++N +Q+L PL FFL R K P L +
Sbjct: 133 ESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSY 192
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
L ++WH R V P + K FR Q + EF+ L++ LH +L+
Sbjct: 193 QKLVSEVWH-RKRPSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
Score = 95 (38.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 103 RD-CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
RD CP+LD+ V ++ L + C S +S N++ACL Y G G+ H+ H
Sbjct: 5 RDLCPHLDSIGEVTKEDLLLKSKSTCQSCGVSGPNLWACLQVSCSYVGCGESFADHSTLH 64
Query: 156 SLEAGHHVYINLRTEKVYC 174
+ H++ +NL T +V+C
Sbjct: 65 AQAKKHNLTVNLTTFRVWC 83
>UNIPROTKB|I3LBG3 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
deubiquitination" evidence=IEA] [GO:0008277 "regulation of
G-protein coupled receptor protein signaling pathway" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0001664 "G-protein coupled receptor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:CU459043
Ensembl:ENSSSCT00000023659 Uniprot:I3LBG3
Length = 918
Score = 107 (42.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 33/121 (27%), Positives = 52/121 (42%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LVHRF 237
E D L+ G+ N+ + ++N +Q+L PL FFL R K P L +
Sbjct: 142 ESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSY 201
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
L ++WH R V P + K FR Q + EF+ L++ LH +L+
Sbjct: 202 QKLVTEVWH-RKRPSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEP 259
Query: 298 K 298
+
Sbjct: 260 R 260
Score = 89 (36.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 103 RD-CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
RD CP+LD+ V ++ L + C S ++ N++ACL Y G G+ H+ H
Sbjct: 5 RDPCPHLDSIGEVTKEDLLLKSKGTCQSCGVAGPNLWACLQVSCSYVGCGESFADHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYC 174
+ H++ +NL T +V+C
Sbjct: 65 AQVKTHNLTVNLTTFRVWC 83
>UNIPROTKB|F1P4F0 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0001664 "G-protein coupled receptor
binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=IEA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:AADN02026599
EMBL:AADN02026598 IPI:IPI00581772 Ensembl:ENSGALT00000006585
Uniprot:F1P4F0
Length = 903
Score = 106 (42.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 32/118 (27%), Positives = 51/118 (43%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LVHRF 237
E D L+ G+ N+ + ++N +Q+L PL FFL R K P L +
Sbjct: 128 ESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSY 187
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
L ++WH + V P + K FR Q + EF+ L++ LH +L+
Sbjct: 188 QKLVSEVWHKKR-PSYVVPSSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 243
Score = 89 (36.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V R L + C S N++ACL G Y G G+ H+ H+
Sbjct: 3 CPHLDSIGEVTRDDLLLKSKGTCQSCGAVGPNLWACLQIGCPYVGCGESFADHSTLHAQA 62
Query: 159 AGHHVYINLRTEKVYC 174
H++ +NL T +V+C
Sbjct: 63 KEHNLTVNLTTFRVWC 78
>UNIPROTKB|Q9Y2K6 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IDA] [GO:0070536
"protein K63-linked deubiquitination" evidence=IDA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP] [GO:0008277
"regulation of G-protein coupled receptor protein signaling
pathway" evidence=IMP] [GO:0001664 "G-protein coupled receptor
binding" evidence=IPI] [GO:0016579 "protein deubiquitination"
evidence=IDA] [GO:0071108 "protein K48-linked deubiquitination"
evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 EMBL:CH471090 GO:GO:0006897
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
EMBL:AL158207 eggNOG:COG5560 CTD:10868 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
EMBL:AY074877 EMBL:AB023220 EMBL:BC039593 EMBL:Y17457 EMBL:Y17459
IPI:IPI00328285 RefSeq:NP_001008563.2 RefSeq:NP_001103773.2
RefSeq:NP_006667.3 UniGene:Hs.5452 ProteinModelPortal:Q9Y2K6
SMR:Q9Y2K6 IntAct:Q9Y2K6 STRING:Q9Y2K6 MEROPS:C19.025
PhosphoSite:Q9Y2K6 DMDM:116242837 PRIDE:Q9Y2K6
Ensembl:ENST00000315480 Ensembl:ENST00000358355
Ensembl:ENST00000372429 GeneID:10868 KEGG:hsa:10868 UCSC:uc004byr.2
GeneCards:GC09P132596 H-InvDB:HIX0008459 HGNC:HGNC:12619
HPA:HPA006287 neXtProt:NX_Q9Y2K6 PharmGKB:PA37245 InParanoid:Q9Y2K6
PhylomeDB:Q9Y2K6 ChiTaRS:USP20 GenomeRNAi:10868 NextBio:41265
ArrayExpress:Q9Y2K6 Bgee:Q9Y2K6 CleanEx:HS_USP20
Genevestigator:Q9Y2K6 GermOnline:ENSG00000136878 Uniprot:Q9Y2K6
Length = 914
Score = 105 (42.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 32/118 (27%), Positives = 51/118 (43%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LVHRF 237
E D L+ G+ N+ + ++N +Q+L PL FFL R K P L +
Sbjct: 133 ESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSY 192
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
L ++WH + V P + K FR Q + EF+ L++ LH +L+
Sbjct: 193 QKLVSEVWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
Score = 86 (35.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 103 RD-CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
RD CP+LD+ V ++ L + C S ++ N++ACL Y G G+ H+ H
Sbjct: 5 RDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYC 174
+ H++ +NL T +++C
Sbjct: 65 AQAKKHNLTVNLTTFRLWC 83
>RGD|1305621 [details] [associations]
symbol:Usp20 "ubiquitin specific peptidase 20" species:10116
"Rattus norvegicus" [GO:0001664 "G-protein coupled receptor
binding" evidence=IEA;ISO] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA;ISO] [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA;ISO] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
SMART:SM00695 RGD:1305621 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
EMBL:CH474001 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
OMA:ADYGQIS OrthoDB:EOG4D52WZ IPI:IPI00869542 RefSeq:NP_001101297.1
Ensembl:ENSRNOT00000010786 GeneID:311856 KEGG:rno:311856
UCSC:RGD:1305621 NextBio:664327 Uniprot:D3ZLQ8
Length = 915
Score = 104 (41.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/118 (27%), Positives = 51/118 (43%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LVHRF 237
E D L+ G+ N+ + ++N +Q+L PL FFL R K P L +
Sbjct: 133 ESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSY 192
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
L ++WH + V P + K FR Q + EF+ L++ LH +L+
Sbjct: 193 QKLISEVWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
Score = 86 (35.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 103 RD-CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
RD CP+LD+ V ++ L + C S ++ N++ACL Y G G+ H+ H
Sbjct: 5 RDICPHLDSIGEVTKEDLLLKSKGTCQSCGVAGPNLWACLQVTCPYVGCGESFADHSSIH 64
Query: 156 SLEAGHHVYINLRTEKVYC 174
+ H++ +NL T +V+C
Sbjct: 65 AQVKRHNLTVNLTTLRVWC 83
>UNIPROTKB|Q28CN3 [details] [associations]
symbol:usp33 "Ubiquitin carboxyl-terminal hydrolase 33"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0007411 "axon
guidance" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
protein signaling pathway" evidence=ISS] [GO:0016477 "cell
migration" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 EMBL:CR926290
EMBL:BC171081 RefSeq:NP_001016228.1 UniGene:Str.42260
ProteinModelPortal:Q28CN3 SMR:Q28CN3 GeneID:548982 KEGG:xtr:548982
Xenbase:XB-GENE-1016674 Uniprot:Q28CN3
Length = 892
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 68/270 (25%), Positives = 107/270 (39%)
Query: 111 VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGK-YYQGRGQKSHAYTHSLEAGHHVYINLR 168
V+ L K C +V+L+ L V+ C C K + R + + L+ H +
Sbjct: 58 VDHSTLHSQDTKHCLTVNLTTLRVW-CYTCSKEVFLDRKLSTQPTSAKLQDSHTQESKMS 116
Query: 169 TEKVYCLPDGY--EINDPSLEDIRHV------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
+ +P E D LE+ + GL NI T ++N +Q+L PL ++F
Sbjct: 117 SSLTLKIPAAVVSENLDIELEEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHYF 176
Query: 221 LIPENY-RHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P L + L IWH +N G V P Q + K+ FR Q +
Sbjct: 177 LDCGGLARTDKKPALCKSYQKLMSDIWH-KNRPGFVIPTNLFQGI-KSVNPTFRGYSQQD 234
Query: 279 PVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD 338
EF+ L++ LH +L K+ + E + +V+E S +D N D G
Sbjct: 235 AQEFLRCLMDVLHEEL---KEQIVEVEE--DAQTGIVEENLDEDKSQSD-NDFHSCDSGS 288
Query: 339 DHDNITTETSRXXXXXXXXXXXXXXXXKDV 368
D+ +E+ + KDV
Sbjct: 289 SSDHAESESRKLSEELTESTMLIHEDQKDV 318
>UNIPROTKB|Q5R5Z6 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
G-protein coupled receptor protein signaling pathway" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
"protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
"protein K48-linked deubiquitination" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
GO:GO:0004197 GO:GO:0004221 CTD:10868 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 EMBL:CR860704 RefSeq:NP_001126647.1
UniGene:Pab.18678 ProteinModelPortal:Q5R5Z6 SMR:Q5R5Z6
GeneID:100173645 KEGG:pon:100173645 InParanoid:Q5R5Z6
Uniprot:Q5R5Z6
Length = 913
Score = 105 (42.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 32/118 (27%), Positives = 51/118 (43%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LVHRF 237
E D L+ G+ N+ + ++N +Q+L PL FFL R K P L +
Sbjct: 132 ESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSY 191
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
L ++WH + V P + K FR Q + EF+ L++ LH +L+
Sbjct: 192 QKLVSEVWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 247
Score = 83 (34.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 103 RD-CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
RD CP+LD+ V ++ L C S ++ N++ACL Y G G+ H+ H
Sbjct: 5 RDLCPHLDSIGEVTKEDLLLKSMGTCQSCGVTGPNLWACLQVACPYVGCGESFADHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYC 174
+ H++ +NL T +++C
Sbjct: 65 AQAKKHNLTVNLTTFRLWC 83
>MGI|MGI:1921520 [details] [associations]
symbol:Usp20 "ubiquitin specific peptidase 20" species:10090
"Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISO]
[GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISO] [GO:0071108 "protein K48-linked deubiquitination"
evidence=ISO] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 MGI:MGI:1921520
GO:GO:0048471 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:CH466542
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0004221 EMBL:AL844546 HSSP:Q93009 eggNOG:COG5560 CTD:10868
GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
MEROPS:C19.025 EMBL:AF449715 EMBL:AK173083 EMBL:AK054279
EMBL:AK163663 EMBL:BC079674 IPI:IPI00469997 RefSeq:NP_083122.1
UniGene:Mm.346654 ProteinModelPortal:Q8C6M1 SMR:Q8C6M1
PhosphoSite:Q8C6M1 PRIDE:Q8C6M1 Ensembl:ENSMUST00000102849
Ensembl:ENSMUST00000170476 GeneID:74270 KEGG:mmu:74270
UCSC:uc008jde.2 InParanoid:Q8C6M1 NextBio:340299 Bgee:Q8C6M1
Genevestigator:Q8C6M1 Uniprot:Q8C6M1
Length = 916
Score = 104 (41.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 32/118 (27%), Positives = 51/118 (43%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSP-LVHRF 237
E D L+ G+ N+ + ++N +Q+L PL FFL R K P L +
Sbjct: 133 ESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSY 192
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
L ++WH + V P + K FR Q + EF+ L++ LH +L+
Sbjct: 193 QKLISEVWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
Score = 84 (34.6 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 103 RD-CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
RD CP+LD V ++ L + C S ++ N++ACL Y G G+ H+ H
Sbjct: 5 RDLCPHLDCIGEVTKEDLLLKSKGTCQSCGVAGPNLWACLQVTCPYVGCGESFADHSSIH 64
Query: 156 SLEAGHHVYINLRTEKVYC 174
+ H++ +NL T +V+C
Sbjct: 65 AQVKKHNLTVNLTTFRVWC 83
>UNIPROTKB|B1WBD7 [details] [associations]
symbol:usp20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
G-protein coupled receptor protein signaling pathway" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
"protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
"protein K48-linked deubiquitination" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
GO:GO:0004197 GO:GO:0004221 CTD:10868 HOVERGEN:HBG054196 KO:K11848
EMBL:BC161716 RefSeq:NP_001121345.1 UniGene:Xl.16107
ProteinModelPortal:B1WBD7 SMR:B1WBD7 GeneID:100158436
KEGG:xla:100158436 Xenbase:XB-GENE-966533 Uniprot:B1WBD7
Length = 840
Score = 136 (52.9 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 53/202 (26%), Positives = 89/202 (44%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L + C S + N++ACL G G G+ H+ H+ +
Sbjct: 8 CPHLDSIGEVTKEDLILKSKGTCESCGVGGPNLWACLQDGCQSVGCGESYADHSTLHAQD 67
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---VGLNNIKETDFVNVTIQSLMRVTP 215
+ L++ + DG +D +DI+ G+ NI + ++N +Q+L P
Sbjct: 68 FPSPAH-PLKSVPIAVGDDGESESDE--DDIKPRGLTGMKNIGNSCYMNAALQALSNCPP 124
Query: 216 LRNFFLIPENY-RHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P L + L ++WH + V P + K FR
Sbjct: 125 LTQFFLECGGLVRTDKKPALCKSYQKLVSELWHKKR-PSYVVPSSLYHGI-KLINPLFRG 182
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 183 YSQQDTQEFLRCLMDQLHEELK 204
>UNIPROTKB|G8JYB7 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform d" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 PANTHER:PTHR10625 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 GO:GO:0033558
RefSeq:NP_001255270.1 ProteinModelPortal:G8JYB7 SMR:G8JYB7
EnsemblMetazoa:F41H10.6d WormBase:F41H10.6d Uniprot:G8JYB7
Length = 138
Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 105 CPYLDTVNR-QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
CP+L V + CS V+ CL C KY GR HA H L + H +
Sbjct: 38 CPHLKEVKPLPPAKINARTACSECQIGAEVWTCLTCYKYNCGRFVNEHAMMHHLSSSHPM 97
Query: 164 YINLRTEKVYCLP-DGYEINDPSL 186
+++ V+C P D Y +++P+L
Sbjct: 98 ALSMADLSVWCYPCDSY-VHNPAL 120
>TAIR|locus:2037985 [details] [associations]
symbol:UBP11 "AT1G32850" species:3702 "Arabidopsis
thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:AC006424 HSSP:P40818 eggNOG:COG5560 HOGENOM:HOG000264375
KO:K11835 ProtClustDB:CLSN2689389 IPI:IPI00534425 PIR:C86453
RefSeq:NP_174562.2 UniGene:At.51891 ProteinModelPortal:Q9MAQ3
SMR:Q9MAQ3 MEROPS:C19.A04 EnsemblPlants:AT1G32850.1 GeneID:840179
KEGG:ath:AT1G32850 TAIR:At1g32850 InParanoid:Q9MAQ3 OMA:HCSASEC
PhylomeDB:Q9MAQ3 Genevestigator:Q9MAQ3 Uniprot:Q9MAQ3
Length = 892
Score = 127 (49.8 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 45/146 (30%), Positives = 73/146 (50%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSPLVHR------FGDLTRK 243
GL N+ T F+N T+Q L P+ +FL ++YR + K+PL R FG+L RK
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFL--QDYRSDINAKNPLGMRGELAIAFGELLRK 359
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W + + V+P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 360 LWSSG--QNTVAPRAFKTKLARFAPQ-FSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYI 416
Query: 304 IYECFQG--ELEVVKEIPKNTISGND 327
+ G + EV +E K + ND
Sbjct: 417 EAKDSDGRPDDEVAEEKWKYHKARND 442
>WB|WBGene00008547 [details] [associations]
symbol:F07A11.4 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR002893 InterPro:IPR018200
Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50865 GO:GO:0008270 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5560
GeneTree:ENSGT00670000097750 KO:K11847 EMBL:Z66511 GeneID:174780
KEGG:cel:CELE_F07A11.4 CTD:174780 PIR:T20528 RefSeq:NP_001254304.1
ProteinModelPortal:Q19132 MEROPS:C19.A39 PaxDb:Q19132
EnsemblMetazoa:F07A11.4 UCSC:F07A11.4 WormBase:F07A11.4a
HOGENOM:HOG000016865 InParanoid:Q19132 OMA:RNDSIFV NextBio:885468
Uniprot:Q19132
Length = 1095
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 47/148 (31%), Positives = 67/148 (45%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI----PE----NYRHCKSPLVHRFGDLTR 242
+ GL NI T F+N +Q L+ LR +FL PE N + L F D
Sbjct: 422 YTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMH 481
Query: 243 KIWHARNFKGQVSPHEFLQAVM-KASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN- 300
++W K + P + V KAS+ F Q + EF+S+LL+ LH D+ KK
Sbjct: 482 QMWSGHQ-KA-IEPTQIKNIVAEKASQ--FANFAQHDAHEFLSFLLDGLHEDVNRVKKKP 537
Query: 301 -TSIIYECFQGELEVVKEIPKNTISGND 327
T + + +L+V E KN I ND
Sbjct: 538 LTGTVESHGRHDLDVSNEAWKNHILRND 565
>ZFIN|ZDB-GENE-081104-421 [details] [associations]
symbol:usp11 "ubiquitin specific peptidase 11"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
SMART:SM00695 ZFIN:ZDB-GENE-081104-421 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00670000097750 EMBL:CR457452
EMBL:CR847787 IPI:IPI00890594 Ensembl:ENSDART00000075624
ArrayExpress:F1QPF4 Bgee:F1QPF4 Uniprot:F1QPF4
Length = 990
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 43/146 (29%), Positives = 69/146 (47%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L PL +FL + E N+ + K + + D+ +++
Sbjct: 243 GLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELNFSNPLGMKGEIAEAYADVIKQM 302
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV-EFMSWLLNTLHSDLRNTKKNTSI 303
W R++ V P F V + + F +G Q + E +S+LL+ LH DL KK I
Sbjct: 303 WSGRHYS--VVPRVFKTKVGHFASQ-F-LGYQQHDSQELLSFLLDGLHEDLNRVKKKEYI 358
Query: 304 IYECFQG--ELEVVKEIPKNTISGND 327
G + EV +E +N + ND
Sbjct: 359 ELRDADGRPDQEVAEEAWRNHLRRND 384
>UNIPROTKB|F6Z5C0 [details] [associations]
symbol:usp15 "Ubiquitin carboxyl-terminal hydrolase 15"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0007179 "transforming growth factor beta receptor signaling
pathway" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
[GO:0035520 "monoubiquitinated protein deubiquitination"
evidence=ISS] [GO:0060389 "pathway-restricted SMAD protein
phosphorylation" evidence=ISS] InterPro:IPR001394
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 GO:GO:0004197
GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 KO:K11835 MEROPS:C19.022
EMBL:AAMC01103598 EMBL:AAMC01103599 EMBL:AAMC01103600
EMBL:AAMC01103601 EMBL:BC166318 RefSeq:NP_001121498.1
GeneID:100158604 KEGG:xtr:100158604 Xenbase:XB-GENE-1008519
Uniprot:F6Z5C0
Length = 982
Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
Identities = 48/173 (27%), Positives = 80/173 (46%)
Query: 173 YCLPD-----GYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN 225
YCLP YE ++P + + GL+N+ T F+N IQ L PL +FL +
Sbjct: 262 YCLPSYAAYKNYEYSEPGRHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL-NDK 320
Query: 226 YR---HCKSPLVHR------FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
Y+ + +PL R + +L +++W + V+P F V + + + F Q
Sbjct: 321 YQDELNMDNPLGMRGEIAKSYAELIKQMWSGKY--SYVTPRAFKTQVGRFAPQ-FSGYQQ 377
Query: 277 SNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGND 327
+ E +++LL+ LH DL +K I + G + V +E +N I ND
Sbjct: 378 QDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHIKRND 430
>UNIPROTKB|I3LRX7 [details] [associations]
symbol:I3LRX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR013792
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
GeneTree:ENSGT00670000097750 Ensembl:ENSSSCT00000030942 OMA:NINNRNP
Uniprot:I3LRX7
Length = 489
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 165 INLRTEKV--YCLPD-----GYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTP 215
IN R K YCLP Y+ ++P + + GL+N+ T F+N IQ L P
Sbjct: 70 INNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPP 129
Query: 216 LRNFFLIPENYR---HCKSPLVHR------FGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
L +FL + Y+ + +PL R + +L +++W + F V+P F V +
Sbjct: 130 LTEYFL-NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK-FS-YVTPRAFKTQVGRF 186
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTIS 324
+ + F Q + E +++LL+ LH DL +K I + G + V +E +N +
Sbjct: 187 APQ-FSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLK 245
Query: 325 GND 327
ND
Sbjct: 246 RND 248
>CGD|CAL0000531 [details] [associations]
symbol:orf19.6260 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS51283 CGD:CAL0000531 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 EMBL:AACQ01000037 KO:K11835 MEROPS:C19.103
RefSeq:XP_718847.1 ProteinModelPortal:Q5AAY9 STRING:Q5AAY9
GeneID:3639521 KEGG:cal:CaO19.6260 Uniprot:Q5AAY9
Length = 1372
Score = 124 (48.7 bits), Expect = 0.00035, P = 0.00035
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTR 242
H+GL+N+ T ++N +Q L+ V + +F I + + +PL + FG L +
Sbjct: 326 HLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGYHGDVANAFGSLLK 385
Query: 243 KIW-HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+ + H +N +SP EF + + S F +Q + E +SWLL+ LH DL
Sbjct: 386 QAFDHVKN-SSSISPREFKSTIGRYSSM-FSGYLQQDSQELLSWLLDALHEDL 436
>UNIPROTKB|Q5RCD3 [details] [associations]
symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0031397 "negative regulation of
protein ubiquitination" evidence=ISS] [GO:0031647 "regulation of
protein stability" evidence=ISS] [GO:0034394 "protein localization
to cell surface" evidence=ISS] InterPro:IPR001394
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053
GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 KO:K11835 HOVERGEN:HBG000864 CTD:7375 EMBL:CR858339
RefSeq:NP_001125307.1 UniGene:Pab.8716 HSSP:Q9Y4E8
ProteinModelPortal:Q5RCD3 SMR:Q5RCD3 PRIDE:Q5RCD3 GeneID:100172206
KEGG:pon:100172206 InParanoid:Q5RCD3 Uniprot:Q5RCD3
Length = 963
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 44/161 (27%), Positives = 71/161 (44%)
Query: 179 YEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRH 228
Y +P I+ GL N+ T F+N +Q L PL ++FL E N
Sbjct: 287 YNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLG 346
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
K + + +L +++W R+ V+P F V + + + F Q + E +++LL+
Sbjct: 347 MKGEIAEAYAELIKQMWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLD 403
Query: 289 TLHSDLRNTKKNTSIIYECFQGELEVV--KEIPKNTISGND 327
LH DL KK + + G +VV KE +N ND
Sbjct: 404 GLHEDLNRVKKKPYLELKDANGRPDVVVAKEAWENHRLRND 444
>UNIPROTKB|E2RFR2 [details] [associations]
symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
OMA:RSISMKA GeneTree:ENSGT00680000099843 EMBL:AAEX03003657
EMBL:AAEX03003658 EMBL:AAEX03003659 Ensembl:ENSCAFT00000027639
Uniprot:E2RFR2
Length = 1121
Score = 121 (47.7 bits), Expect = 0.00059, P = 0.00059
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--KSPLVHRFGDLTRKIWHARNF 250
GL N T F+N +Q L T L FL YR ++ + + L R +W R +
Sbjct: 92 GLKNHGNTCFMNAVVQCLSN-TDLLAEFLALGRYRAAPGRAEVTEQLAALVRALW-TREY 149
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
Q+S EF AV K + F+ Q + +EF+ WLL+ +H DL + +
Sbjct: 150 TPQLSA-EFKNAVSKYGSQ-FQGNAQHDALEFLLWLLDRVHEDLEGSSR 196
>UNIPROTKB|F8VVD6 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018475 HGNC:HGNC:20064 IPI:IPI01021117
ProteinModelPortal:F8VVD6 SMR:F8VVD6 Ensembl:ENST00000549639
ArrayExpress:F8VVD6 Bgee:F8VVD6 Uniprot:F8VVD6
Length = 111
Score = 93 (37.8 bits), Expect = 0.00069, P = 0.00069
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 132 NVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC-LPDGYEINDPSLEDIR 190
+++ACL C GR + HA H E+ H V + + V+C L D Y +ND + D++
Sbjct: 37 SIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLK 96
>MGI|MGI:2384312 [details] [associations]
symbol:Usp11 "ubiquitin specific peptidase 11" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] Reactome:REACT_93132
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:2384312
GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 EMBL:CH466625 EMBL:AL807240
eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 MEROPS:C19.014
HOVERGEN:HBG000864 OrthoDB:EOG4QRH3H CTD:8237 EMBL:AK166523
EMBL:BC005470 IPI:IPI00378163 RefSeq:NP_663603.3 UniGene:Mm.34489
ProteinModelPortal:Q99K46 SMR:Q99K46 STRING:Q99K46
PhosphoSite:Q99K46 PaxDb:Q99K46 PRIDE:Q99K46
Ensembl:ENSMUST00000033383 GeneID:236733 KEGG:mmu:236733
GeneTree:ENSGT00670000097750 InParanoid:B1AXB2 NextBio:383051
Bgee:Q99K46 CleanEx:MM_USP11 Genevestigator:Q99K46
GermOnline:ENSMUSG00000031066 Uniprot:Q99K46
Length = 921
Score = 119 (46.9 bits), Expect = 0.00077, P = 0.00077
Identities = 45/148 (30%), Positives = 69/148 (46%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L V L +FL + E N+R+ K L + DL ++
Sbjct: 258 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 317
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV-EFMSWLLNTLHSDLRNTKKNTSI 303
W + + P+ F V + + F +G Q + E +S+LL+ LH DL KK +
Sbjct: 318 WSG--YHRSIVPNVFKNKVGHFASQ-F-LGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 373
Query: 304 IYECFQG----ELEVVKEIPKNTISGND 327
E G +LEV +E +N ND
Sbjct: 374 --ELCNGAGRPDLEVAQEAWQNHKRRND 399
>UNIPROTKB|Q5D006 [details] [associations]
symbol:Usp11 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 RGD:1303052
GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 EMBL:CH474009 HOGENOM:HOG000264375
KO:K11835 MEROPS:C19.014 HOVERGEN:HBG000864 CTD:8237 OMA:GICGLTN
GeneTree:ENSGT00670000097750 EMBL:BC090333 IPI:IPI00421768
RefSeq:NP_001008861.2 UniGene:Rn.2492 Ensembl:ENSRNOT00000051956
GeneID:408217 KEGG:rno:408217 InParanoid:Q5D006 NextBio:696448
Genevestigator:Q5D006 Uniprot:Q5D006
Length = 921
Score = 119 (46.9 bits), Expect = 0.00077, P = 0.00077
Identities = 45/148 (30%), Positives = 69/148 (46%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE-NYRH---CKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L V L +FL + E N+R+ K L + DL ++
Sbjct: 258 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 317
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV-EFMSWLLNTLHSDLRNTKKNTSI 303
W + + P+ F V + + F +G Q + E +S+LL+ LH DL KK +
Sbjct: 318 WSG--YHRSIVPNVFKNKVGHFASQ-F-LGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 373
Query: 304 IYECFQG----ELEVVKEIPKNTISGND 327
E G +LEV +E +N ND
Sbjct: 374 --ELCNGAGRPDLEVAQEAWQNHKRRND 399
>UNIPROTKB|Q9Y4E8 [details] [associations]
symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase 15"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0016579
"protein deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0035520
"monoubiquitinated protein deubiquitination" evidence=IDA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IMP]
[GO:0007179 "transforming growth factor beta receptor signaling
pathway" evidence=IMP;IDA;TAS] [GO:0030509 "BMP signaling pathway"
evidence=IDA] [GO:0046332 "SMAD binding" evidence=IPI] [GO:0060389
"pathway-restricted SMAD protein phosphorylation" evidence=IMP]
[GO:0005160 "transforming growth factor beta receptor binding"
evidence=IPI] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=TAS]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR013792
InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111102 GO:GO:0006508
GO:GO:0030509 GO:GO:0007179 GO:GO:0060389 GO:GO:0006511
GO:GO:0008233 SUPFAM:SSF55205 GO:GO:0004197 GO:GO:0030512
GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 eggNOG:COG5560
HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864 MEROPS:C19.022
OMA:RMDPLAK OrthoDB:EOG4DNF3R EMBL:AF106069 EMBL:AB011101
EMBL:AF153604 EMBL:AK023703 EMBL:AK292337 EMBL:AC048342
EMBL:AC079035 EMBL:AC117370 EMBL:BC020688 EMBL:BC063454
EMBL:BC125123 EMBL:AF013990 IPI:IPI00000728 IPI:IPI00219504
IPI:IPI01015293 RefSeq:NP_001239007.1 RefSeq:NP_001239008.1
RefSeq:NP_006304.1 UniGene:Hs.434951 PDB:1W6V PDB:3LMN PDB:3PPA
PDB:3PV1 PDB:3T9L PDB:4A3O PDB:4A3P PDBsum:1W6V PDBsum:3LMN
PDBsum:3PPA PDBsum:3PV1 PDBsum:3T9L PDBsum:4A3O PDBsum:4A3P
ProteinModelPortal:Q9Y4E8 SMR:Q9Y4E8 IntAct:Q9Y4E8 STRING:Q9Y4E8
PhosphoSite:Q9Y4E8 DMDM:28381406 PaxDb:Q9Y4E8 PRIDE:Q9Y4E8
DNASU:9958 Ensembl:ENST00000280377 Ensembl:ENST00000312635
Ensembl:ENST00000353364 GeneID:9958 KEGG:hsa:9958 UCSC:uc001srb.2
UCSC:uc001src.2 CTD:9958 GeneCards:GC12P062706 H-InvDB:HIX0010773
HGNC:HGNC:12613 HPA:HPA006237 MIM:604731 neXtProt:NX_Q9Y4E8
PharmGKB:PA37239 InParanoid:Q9Y4E8 PhylomeDB:Q9Y4E8 ChiTaRS:USP15
EvolutionaryTrace:Q9Y4E8 GenomeRNAi:9958 NextBio:37576
ArrayExpress:Q9Y4E8 Bgee:Q9Y4E8 CleanEx:HS_USP15
Genevestigator:Q9Y4E8 GermOnline:ENSG00000135655 Uniprot:Q9Y4E8
Length = 981
Score = 119 (46.9 bits), Expect = 0.00084, P = 0.00084
Identities = 50/186 (26%), Positives = 85/186 (45%)
Query: 164 YINLRTEKV----YCLPD-----GYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMR 212
Y N+ V YCLP Y+ ++P + + GL+N+ T F+N IQ L
Sbjct: 250 YNNMNNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSN 309
Query: 213 VTPLRNFFLIPENYR---HCKSPLVHR------FGDLTRKIWHARNFKGQVSPHEFLQAV 263
PL +FL + Y+ + +PL R + +L +++W + F V+P F V
Sbjct: 310 TPPLTEYFL-NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK-FS-YVTPRAFKTQV 366
Query: 264 MKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKN 321
+ + + F Q + E +++LL+ LH DL +K I + G + V +E +N
Sbjct: 367 GRFAPQ-FSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWEN 425
Query: 322 TISGND 327
+ ND
Sbjct: 426 HLKRND 431
>MGI|MGI:101857 [details] [associations]
symbol:Usp15 "ubiquitin specific peptidase 15" species:10090
"Mus musculus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=ISO]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
[GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO;IDA] [GO:0005160 "transforming growth factor beta
receptor binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007179 "transforming growth factor beta
receptor signaling pathway" evidence=ISO] [GO:0008152 "metabolic
process" evidence=IDA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030509 "BMP
signaling pathway" evidence=ISO] [GO:0035520 "monoubiquitinated
protein deubiquitination" evidence=ISO] [GO:0046332 "SMAD binding"
evidence=ISO] [GO:0060389 "pathway-restricted SMAD protein
phosphorylation" evidence=ISO] InterPro:IPR001394
InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:101857
GO:GO:0005634 GO:GO:0005737 GO:GO:0030509 GO:GO:0007179
GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004197
GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 EMBL:CH466578
eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
GeneTree:ENSGT00670000097750 MEROPS:C19.022 OMA:RMDPLAK
OrthoDB:EOG4DNF3R CTD:9958 ChiTaRS:USP15 EMBL:AF468037
EMBL:AK046332 EMBL:AK083303 EMBL:AK133852 EMBL:AK145749
EMBL:AK161469 EMBL:AK168755 EMBL:AK122301 EMBL:BC050042
IPI:IPI00154012 IPI:IPI00222152 IPI:IPI00222154 IPI:IPI00403342
RefSeq:NP_081880.2 UniGene:Mm.244209 UniGene:Mm.470032
ProteinModelPortal:Q8R5H1 SMR:Q8R5H1 STRING:Q8R5H1
PhosphoSite:Q8R5H1 PaxDb:Q8R5H1 PRIDE:Q8R5H1
Ensembl:ENSMUST00000020334 GeneID:14479 KEGG:mmu:14479
UCSC:uc007hgn.1 UCSC:uc007hgt.1 UCSC:uc011xpf.1 InParanoid:Q8R5H1
NextBio:286150 Bgee:Q8R5H1 CleanEx:MM_USP15 Genevestigator:Q8R5H1
GermOnline:ENSMUSG00000020124 Uniprot:Q8R5H1
Length = 981
Score = 119 (46.9 bits), Expect = 0.00084, P = 0.00084
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 165 INLRTEKV--YCLPD-----GYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTP 215
IN R K YCLP Y+ ++P + + GL+N+ T F+N IQ L P
Sbjct: 253 INNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPP 312
Query: 216 LRNFFLIPENYR---HCKSPLVHR------FGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
L +FL + Y+ + +PL R + +L +++W + F V+P F V +
Sbjct: 313 LTEYFL-NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK-FS-YVTPRAFKTQVGRF 369
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTIS 324
+ + F Q + E +++LL+ LH DL +K I + G + V +E +N +
Sbjct: 370 APQ-FSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLK 428
Query: 325 GND 327
ND
Sbjct: 429 RND 431
>UNIPROTKB|E2R988 [details] [associations]
symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0060389
"pathway-restricted SMAD protein phosphorylation" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0035520
"monoubiquitinated protein deubiquitination" evidence=IEA]
[GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005160 "transforming growth factor
beta receptor binding" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR013792
InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
GO:GO:0008234 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0016579
GO:GO:0004221 GeneTree:ENSGT00670000097750 OMA:RMDPLAK
EMBL:AAEX03006985 Ensembl:ENSCAFT00000000496 Uniprot:E2R988
Length = 982
Score = 119 (46.9 bits), Expect = 0.00084, P = 0.00084
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 165 INLRTEKV--YCLPD-----GYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTP 215
IN R K YCLP Y+ ++P + + GL+N+ T F+N IQ L P
Sbjct: 254 INNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPP 313
Query: 216 LRNFFLIPENYR---HCKSPLVHR------FGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
L +FL + Y+ + +PL R + +L +++W + F V+P F V +
Sbjct: 314 LTEYFL-NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK-FS-YVTPRAFKTQVGRF 370
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTIS 324
+ + F Q + E +++LL+ LH DL +K I + G + V +E +N +
Sbjct: 371 APQ-FSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKIVAEEAWENHLK 429
Query: 325 GND 327
ND
Sbjct: 430 RND 432
>UNIPROTKB|F1SKD5 [details] [associations]
symbol:LOC100737425 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
GeneTree:ENSGT00670000097750 OMA:RMDPLAK EMBL:AEMK01054830
EMBL:AEMK01054840 EMBL:CU570842 EMBL:CU856603 EMBL:CU928889
Ensembl:ENSSSCT00000000493 Uniprot:F1SKD5
Length = 982
Score = 119 (46.9 bits), Expect = 0.00084, P = 0.00084
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 165 INLRTEKV--YCLPD-----GYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTP 215
IN R K YCLP Y+ ++P + + GL+N+ T F+N IQ L P
Sbjct: 254 INNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPP 313
Query: 216 LRNFFLIPENYR---HCKSPLVHR------FGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
L +FL + Y+ + +PL R + +L +++W + F V+P F V +
Sbjct: 314 LTEYFL-NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK-FS-YVTPRAFKTQVGRF 370
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTIS 324
+ + F Q + E +++LL+ LH DL +K I + G + V +E +N +
Sbjct: 371 APQ-FSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLK 429
Query: 325 GND 327
ND
Sbjct: 430 RND 432
>RGD|1308216 [details] [associations]
symbol:Usp44 "ubiquitin specific peptidase 44" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051322 "anaphase"
evidence=IEA] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=IEA] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 RGD:1308216
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 EMBL:CH473960 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
OrthoDB:EOG4XGZZK IPI:IPI00870073 RefSeq:NP_001101553.1
UniGene:Rn.64954 Ensembl:ENSRNOT00000007465 GeneID:314746
KEGG:rno:314746 UCSC:RGD:1308216 NextBio:668165 Uniprot:D4A251
Length = 481
Score = 94 (38.1 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 123 FCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC-LPDGYEI 181
FC V + +++ACL C G+ + HA H E+ H V + V+C L + Y +
Sbjct: 25 FCMVCNTTESIWACLSCSHVACGQYIQEHALKHFEESSHPVAFEVNDMYVFCYLCNDYVL 84
Query: 182 NDPSLEDIRHVG--LNNIKETDFVNVTIQS 209
ND + D++ + L+ IK + V +QS
Sbjct: 85 NDNTAGDLKSLRSTLSAIKGKSYPCV-VQS 113
Score = 64 (27.6 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 31/111 (27%), Positives = 41/111 (36%)
Query: 217 RNFFLI-PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
RN LI P S L H L + +W VSP L +V K FR
Sbjct: 365 RNMELIQPREPSSPYSSLCHELHTLFQVMWSGE--WALVSPFAMLHSVWKLIPA-FRGYA 421
Query: 276 QSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGEL-EVVKEIPKNTISG 325
Q + EF+ LL+ + +L T + Q L E V + N G
Sbjct: 422 QQDAQEFLCELLDKIQRELETTGTKLPALIPTSQRRLIEQVLNVVNNIFHG 472
>RGD|1562061 [details] [associations]
symbol:Usp17l5 "ubiquitin specific peptidase 17-like 5"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
Ensembl:ENSRNOT00000023213 Uniprot:F1M413
Length = 504
Score = 115 (45.5 bits), Expect = 0.00097, P = 0.00097
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----LVHRFGDLTRKIWHAR 248
GL NI + ++N +Q L PL ++ L E+ + C P + +T+ + H+
Sbjct: 52 GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCCYPEGCNMCAMEAHVTQSLLHSH 111
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-SDLRN------TKKNT 301
+ G + P E L + K R Q + EF+ + LNT+H S LR T K++
Sbjct: 112 S-GGVMKPSEILTSTFH--KHR-----QEDAHEFLMFTLNTMHESCLRGCKQSETTSKDS 163
Query: 302 SIIYECFQGEL 312
S+IY+ F G++
Sbjct: 164 SLIYDIFGGQM 174
>RGD|1565607 [details] [associations]
symbol:RGD1565607 "similar to mouse deubiquitinating enzyme 6"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
Ensembl:ENSRNOT00000023213 Uniprot:F1M413
Length = 504
Score = 115 (45.5 bits), Expect = 0.00097, P = 0.00097
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----LVHRFGDLTRKIWHAR 248
GL NI + ++N +Q L PL ++ L E+ + C P + +T+ + H+
Sbjct: 52 GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCCYPEGCNMCAMEAHVTQSLLHSH 111
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-SDLRN------TKKNT 301
+ G + P E L + K R Q + EF+ + LNT+H S LR T K++
Sbjct: 112 S-GGVMKPSEILTSTFH--KHR-----QEDAHEFLMFTLNTMHESCLRGCKQSETTSKDS 163
Query: 302 SIIYECFQGEL 312
S+IY+ F G++
Sbjct: 164 SLIYDIFGGQM 174
>UNIPROTKB|B7ZVX5 [details] [associations]
symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase 43"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004221 EMBL:AC027045 EMBL:AC118755
IPI:IPI00166377 RefSeq:NP_001254505.1 UniGene:Hs.709621
GeneID:124739 KEGG:hsa:124739 CTD:124739 HGNC:HGNC:20072
HOVERGEN:HBG094126 KO:K11856 EMBL:BC136368 EMBL:BC171759
STRING:B7ZVX5 Ensembl:ENST00000570475 UCSC:uc010vva.2
Uniprot:B7ZVX5
Length = 1118
Score = 119 (46.9 bits), Expect = 0.00098, P = 0.00098
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--KSPLVHRFGDLTRKIWHARNF 250
GL N T F+N +Q L T L FL YR ++ + + L R +W R +
Sbjct: 102 GLKNHGNTCFMNAVVQCLSN-TDLLAEFLALGRYRAAPGRAEVTEQLAALVRALW-TREY 159
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
Q+S EF AV K + F+ Q + +EF+ WLL+ +H DL + +
Sbjct: 160 TPQLSA-EFKNAVSKYGSQ-FQGNSQHDALEFLLWLLDRVHEDLEGSSR 206
>UNIPROTKB|E1BKF4 [details] [associations]
symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
OMA:RSISMKA GeneTree:ENSGT00680000099843 EMBL:DAAA02048838
EMBL:DAAA02048839 IPI:IPI00904143 Ensembl:ENSBTAT00000000131
Uniprot:E1BKF4
Length = 1121
Score = 119 (46.9 bits), Expect = 0.00098, P = 0.00098
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--CKSPLVHRFGDLTRKIWHARNF 250
GL N T F+N +Q L T L FL YR ++ + + L R +W R +
Sbjct: 101 GLKNHGNTCFMNAVVQCLSN-TDLLAEFLALRRYRAEPGRAEVTEQLAALVRALW-TREY 158
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
Q+S EF AV K + F+ Q + +EF+ WLL+ +H DL + +
Sbjct: 159 TPQLSA-EFKNAVSKYGAQ-FQGNAQHDALEFLLWLLDRVHEDLEGSSR 205
>UNIPROTKB|Q70EL4 [details] [associations]
symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase 43"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 EMBL:CH471108 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 EMBL:AC027045 HSSP:P54578 eggNOG:COG5560
EMBL:AJ583817 EMBL:AK055188 EMBL:AK090821 EMBL:AC118755
EMBL:BC144041 IPI:IPI00166377 IPI:IPI00176488 IPI:IPI00739286
RefSeq:NP_001254505.1 RefSeq:NP_694942.3 UniGene:Hs.709621
ProteinModelPortal:Q70EL4 IntAct:Q70EL4 MINT:MINT-3976419
STRING:Q70EL4 MEROPS:C19.976 PhosphoSite:Q70EL4 DMDM:296452852
PaxDb:Q70EL4 PRIDE:Q70EL4 Ensembl:ENST00000285199
Ensembl:ENST00000570827 Ensembl:ENST00000573955
Ensembl:ENST00000574408 GeneID:124739 KEGG:hsa:124739
UCSC:uc002gma.4 UCSC:uc002gmc.4 CTD:124739 GeneCards:GC17P009489
H-InvDB:HIX0013531 HGNC:HGNC:20072 HPA:HPA023389 HPA:HPA027762
neXtProt:NX_Q70EL4 PharmGKB:PA134865304 HOGENOM:HOG000293426
HOVERGEN:HBG094126 InParanoid:Q70EL4 KO:K11856 OMA:RSISMKA
OrthoDB:EOG4DR9BH GenomeRNAi:124739 NextBio:81362
ArrayExpress:Q70EL4 Bgee:Q70EL4 CleanEx:HS_USP43
Genevestigator:Q70EL4 GermOnline:ENSG00000154914 Uniprot:Q70EL4
Length = 1123
Score = 119 (46.9 bits), Expect = 0.00098, P = 0.00098
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--KSPLVHRFGDLTRKIWHARNF 250
GL N T F+N +Q L T L FL YR ++ + + L R +W R +
Sbjct: 102 GLKNHGNTCFMNAVVQCLSN-TDLLAEFLALGRYRAAPGRAEVTEQLAALVRALW-TREY 159
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
Q+S EF AV K + F+ Q + +EF+ WLL+ +H DL + +
Sbjct: 160 TPQLSA-EFKNAVSKYGSQ-FQGNSQHDALEFLLWLLDRVHEDLEGSSR 206
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 387 350 0.0010 116 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 67
No. of states in DFA: 613 (65 KB)
Total size of DFA: 249 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.03u 0.10s 29.13t Elapsed: 00:00:01
Total cpu time: 29.04u 0.10s 29.14t Elapsed: 00:00:01
Start: Sat May 11 15:06:10 2013 End: Sat May 11 15:06:11 2013