BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016557
(387 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147862940|emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]
Length = 566
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/425 (67%), Positives = 315/425 (74%), Gaps = 51/425 (12%)
Query: 1 MTKKRKNNGSADEDRH---VKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGG 57
M KR++N DE R +K K +++SSP P L FEN L LA+ DDDDE+EE
Sbjct: 1 MKTKREDNSDEDEGREFPDLKRQKKLDESSPPPASLAFENALHTLASYDDDDDEKEEEEM 60
Query: 58 RGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGY-------GQGQRSRLVEVRRDCPYLDT 110
+ SG + ++ R E + E+ DD + Q +RSRLVEVRRDCPYLDT
Sbjct: 61 KEASGLRGREDNRRAERNGHRDGEEYDDDDDDDDDPHQEANQVKRSRLVEVRRDCPYLDT 120
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE
Sbjct: 121 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 180
Query: 171 KVYCLPDGYEINDPSLEDIRHV---------------------------------GLNNI 197
KVYCLPDGYEINDPSL+DIRHV GLNNI
Sbjct: 181 KVYCLPDGYEINDPSLDDIRHVLNPRFTREQVDQLDKNKQWSRALDGSDYLPGMVGLNNI 240
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFG+LTRKIWHARNFKGQVSPH
Sbjct: 241 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGELTRKIWHARNFKGQVSPH 300
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKE 317
EFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH DLR +KKN+SIIY CFQGELEVVKE
Sbjct: 301 EFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHGDLRTSKKNSSIIYNCFQGELEVVKE 360
Query: 318 IPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
IP +G+DQN + D+H ++ ET RMPFLMLGLDLPPPPLFKDVMEKN
Sbjct: 361 IPNKGFFEKRENGDDQNK---ATTADEHADVILETCRMPFLMLGLDLPPPPLFKDVMEKN 417
Query: 373 IIPQL 377
IIPQ+
Sbjct: 418 IIPQV 422
>gi|356546089|ref|XP_003541464.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine
max]
Length = 563
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 270/383 (70%), Positives = 297/383 (77%), Gaps = 47/383 (12%)
Query: 37 NPLLPLANTYDDDDEEEEY--------GGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLAN 88
NPL LAN Y D DEEE+Y R + G++ + + GE DD D+++D + +
Sbjct: 42 NPLSGLANNYADIDEEEDYVRRERGSINERRNDGSQHNGHKKYGEADDSDEEDDSHEQFS 101
Query: 89 GYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQ 148
G R+R VEVR+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+
Sbjct: 102 G-----RNRQVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGK 156
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------- 192
KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL+DIR+V
Sbjct: 157 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRNVLNPRFAAKEVEQLDKN 216
Query: 193 -----------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVH 235
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+HCKSPLVH
Sbjct: 217 KQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVH 276
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
RFG+LTRKIWH RNFKGQVSPHEFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH+DL+
Sbjct: 277 RFGELTRKIWHTRNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLK 336
Query: 296 NTKKNTSIIYECFQGELEVVKEIPKNTIS-GNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
+KKNTSIIYECFQGELEVVKEIP IS + N EK SDG ++ ETS+MPFLM
Sbjct: 337 TSKKNTSIIYECFQGELEVVKEIPNKVISDKKENNAEKLSDGVNERYAFVKETSKMPFLM 396
Query: 355 LGLDLPPPPLFKDVMEKNIIPQL 377
LGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 397 LGLDLPPPPLFKDVMEKNIIPQV 419
>gi|356534252|ref|XP_003535671.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine
max]
Length = 569
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/395 (68%), Positives = 288/395 (72%), Gaps = 65/395 (16%)
Query: 37 NPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQ-- 94
NPL LAN Y D DEEE+ R G ++ D + N YG+
Sbjct: 42 NPLSGLANNYADIDEEEDDVRR-----------ERGSVNERSNDGSHHNGHNKYGEADDS 90
Query: 95 -------------RSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
R+R VEVR+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK
Sbjct: 91 DEEDDDSHEQFTGRNRQVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 150
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
YYQGRG+KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSL+DIRHV
Sbjct: 151 YYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRHVLNPRFTAKE 210
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+H
Sbjct: 211 VEQLDKNKQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQH 270
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
CKSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG QS+PVEFMSWLLN
Sbjct: 271 CKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLN 330
Query: 289 TLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISG------NDQNTEKGSDGGDDHDN 342
TLH+DL+ +KKNTSIIYECFQGELEVVKEIP IS N N EK SDG ++
Sbjct: 331 TLHADLKTSKKNTSIIYECFQGELEVVKEIPNKVISDKKENSENQNNAEKLSDGVNERYA 390
Query: 343 ITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
ETS+MPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 391 FVKETSKMPFLMLGLDLPPPPLFKDVMEKNIIPQV 425
>gi|255559080|ref|XP_002520562.1| ubiquitin specific protease 39 and snrnp assembly factor, putative
[Ricinus communis]
gi|223540222|gb|EEF41795.1| ubiquitin specific protease 39 and snrnp assembly factor, putative
[Ricinus communis]
Length = 557
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 276/419 (65%), Positives = 315/419 (75%), Gaps = 48/419 (11%)
Query: 1 MTKKRKNNGSADEDRHVKSVKVV---EQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGG 57
MT KRK+ G+ + + + S + E +SPS ++ +NPL+P Y+D D+EE Y
Sbjct: 1 MTTKRKDGGNIEIEGYNTSKRQRVGNEHNSPSSLQV-IDNPLVP----YNDVDDEEHYQR 55
Query: 58 RGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLD 117
+ G G +DDD+D D+D+DD G Q R +E R DCPYLDTVNRQVLD
Sbjct: 56 FEHNNQSNGYQGLKEDDDDDDDDDDDDDDGQGSNQANRRNQLEPREDCPYLDTVNRQVLD 115
Query: 118 FDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPD 177
FDFE+FCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINL+TEKVYCLPD
Sbjct: 116 FDFERFCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYINLQTEKVYCLPD 175
Query: 178 GYEINDPSLEDIRHV---------------------------------GLNNIKETDFVN 204
GYEI DPSL+DIRHV GLNNIKETDFVN
Sbjct: 176 GYEIIDPSLDDIRHVLNPRFSRDQVEQLDRNRQWSRALDGSDYLPGMVGLNNIKETDFVN 235
Query: 205 VTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVM 264
VTIQSLMRVTPLRNFFLIPENY+HC+SPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVM
Sbjct: 236 VTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVM 295
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTIS 324
KASKKRFRIG QS+PVEFM+WLLNTLH+DLR +KKN SIIY+CFQGELEVVKEIP I+
Sbjct: 296 KASKKRFRIGQQSDPVEFMAWLLNTLHADLRTSKKNNSIIYDCFQGELEVVKEIPSKAIA 355
Query: 325 GNDQN------TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+N +K +DGG++HD + TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 356 EKKENDDEQNSIQKTTDGGNEHD-VVTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 413
>gi|145333717|ref|NP_001078426.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
gi|23397271|gb|AAN31917.1| unknown protein [Arabidopsis thaliana]
gi|110741459|dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana]
gi|332659187|gb|AEE84587.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
Length = 541
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/408 (65%), Positives = 305/408 (74%), Gaps = 59/408 (14%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDD-----DEEEEYGGRGDSG 62
NG ++E+R VK +V+E+S PP LGF NPLLPLANTYDDD +E+++ RG+
Sbjct: 9 NGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQARGNGV 68
Query: 63 AKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEK 122
AK NG + + +++ +D++D G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+
Sbjct: 69 AKGEGNGNKVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLDFDFER 128
Query: 123 FCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIN 182
FCSVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEIN
Sbjct: 129 FCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEIN 188
Query: 183 DPSLEDIRHV---------------------------------GLNNIKETDFVNVTIQS 209
DPSL+DIRHV GLNNI++T+FVNVTIQS
Sbjct: 189 DPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQS 248
Query: 210 LMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
LMRVTPLRNFFLIPENY+HCKSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKK
Sbjct: 249 LMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
RFRIG QS+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE GN+
Sbjct: 309 RFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE-----FQGNE-- 361
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
E SRM FLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 362 --------------NKEISRMSFLMLGLDLPPPPLFKDVMEKNIIPQV 395
>gi|334186810|ref|NP_001190799.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
gi|332659199|gb|AEE84599.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
Length = 539
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/406 (66%), Positives = 299/406 (73%), Gaps = 57/406 (14%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYG-GRGDSGAKVG 66
NG ++E+R VK +V+E+S PP LGF NPLLP AN YDDD+ ++ R + AK
Sbjct: 9 NGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPFANAYDDDNNQQNKSQTRCNVVAKGE 68
Query: 67 QNGRT--GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFC 124
NG GE E D+++DD G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+FC
Sbjct: 69 GNGNKVKGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFC 128
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
SVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDP
Sbjct: 129 SVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDP 188
Query: 185 SLEDIRHV---------------------------------GLNNIKETDFVNVTIQSLM 211
SL+DIRHV GLNNI++T+FVNVTIQSLM
Sbjct: 189 SLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLM 248
Query: 212 RVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 271
RVTPLRNFFLIPENY+HCKSPL HRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRF
Sbjct: 249 RVTPLRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 308
Query: 272 RIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTE 331
RIG QS+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE GN+
Sbjct: 309 RIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE-----YQGNE---- 359
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
E SRMPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 360 ------------NKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 393
>gi|449443550|ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
sativus]
Length = 550
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 278/416 (66%), Positives = 313/416 (75%), Gaps = 49/416 (11%)
Query: 1 MTKKRKNNGSADEDR---HVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGG 57
M KR++N DE+ +K K++ + SPS ENP LP N Y DDDEEE++
Sbjct: 1 MGSKRRSNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFN-YGDDDEEEDF-- 57
Query: 58 RGDSGAKVGQNGRT--GEDDDEDKDEDEDDLANGYG-QGQRSRLVEVRRDCPYLDTVNRQ 114
K QNG G++ D + DE++D+ + G Q +RSR VEVR+DCPYLDTVNRQ
Sbjct: 58 ------KFKQNGSKYDGDEGDYNDDEEDDEEYDNNGNQVKRSRDVEVRKDCPYLDTVNRQ 111
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINLRTEKVYC
Sbjct: 112 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYC 171
Query: 175 LPDGYEINDPSLEDIRHV---------------------------------GLNNIKETD 201
LPDGYEINDPSL+DIR+V GLNNIKETD
Sbjct: 172 LPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETD 231
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
FVNVTIQSLMRVTPLRNFFLIP NY+HC+SPLVHRFG+LTRKIWHARNFKGQVSPHEFLQ
Sbjct: 232 FVNVTIQSLMRVTPLRNFFLIPANYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQ 291
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKN 321
AVMKASKKRFRIG QS+PVEFMSW LNTLHS+LR TKK++SIIYECFQGELEVVKEI
Sbjct: 292 AVMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSK 351
Query: 322 TISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ +N E+ D G + ++ ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 352 ALIEKKENGEE-QDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 406
>gi|449520261|ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
sativus]
Length = 550
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 277/416 (66%), Positives = 313/416 (75%), Gaps = 49/416 (11%)
Query: 1 MTKKRKNNGSADEDR---HVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGG 57
M KR++N DE+ +K K++ + SPS ENP LP N Y DDDEEE++
Sbjct: 1 MGSKRRSNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFN-YGDDDEEEDF-- 57
Query: 58 RGDSGAKVGQNGRT--GEDDDEDKDEDEDDLANGYG-QGQRSRLVEVRRDCPYLDTVNRQ 114
K QNG G++ D + DE++D+ + G Q +RSR VEVR+DCPYLDTVNRQ
Sbjct: 58 ------KFKQNGSKYDGDEGDYNDDEEDDEEYDNNGNQVKRSRDVEVRKDCPYLDTVNRQ 111
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINLRTEKVYC
Sbjct: 112 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYC 171
Query: 175 LPDGYEINDPSLEDIRHV---------------------------------GLNNIKETD 201
LPDGYEINDPSL+DIR+V GLNNIKETD
Sbjct: 172 LPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETD 231
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
FVNVTIQSLMRVTPLRNFFLIP NY+HC+SPLVHRFG+LTRKIWHARNFKGQVSPHEFLQ
Sbjct: 232 FVNVTIQSLMRVTPLRNFFLIPANYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQ 291
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKN 321
A+MKASKKRFRIG QS+PVEFMSW LNTLHS+LR TKK++SIIYECFQGELEVVKEI
Sbjct: 292 AIMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSK 351
Query: 322 TISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ +N E+ D G + ++ ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 352 ALIEKKENGEE-QDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 406
>gi|357474209|ref|XP_003607389.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
gi|355508444|gb|AES89586.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
Length = 544
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/401 (65%), Positives = 291/401 (72%), Gaps = 56/401 (13%)
Query: 14 DRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGE 73
D K +V E SSPSPP + NPL LAN Y D DEEE+Y R +NG + +
Sbjct: 19 DFESKRQRVDEDSSPSPPPVNIANPLSGLANNYADIDEEEDYYQRAKGAVSDKRNGESQQ 78
Query: 74 DDDEDKDEDEDDLANGYGQ----GQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
+ + + +D+ D Q G+ SR VEVR+DCPYLDTVNRQVLDFDFEKFCSVSLS
Sbjct: 79 NGHKYEGDDDSDEEEDSNQQLFGGRSSRQVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLS 138
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
NLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINL TEKV+CLPDGYEI+DPSL+DI
Sbjct: 139 NLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLLTEKVFCLPDGYEIDDPSLDDI 198
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
RHV GLNNIKETDFVNVTIQSLMRVTPL
Sbjct: 199 RHVLNPRFTAKDVEQLDKNKQWSRALDGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPL 258
Query: 217 RNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
RNFFLIPENY+HC+S LV RFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG Q
Sbjct: 259 RNFFLIPENYQHCESQLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQ 318
Query: 277 SNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG 336
S+PVEF+SWLLNTLH+DL+ KKN SIIYECFQGELEVVK+IP S
Sbjct: 319 SDPVEFVSWLLNTLHADLKPPKKNMSIIYECFQGELEVVKDIPNKNASAK---------- 368
Query: 337 GDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
ETS+MPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 369 ---------ETSKMPFLMLGLDLPPPPLFKDVMEKNIIPQV 400
>gi|224089613|ref|XP_002308779.1| predicted protein [Populus trichocarpa]
gi|222854755|gb|EEE92302.1| predicted protein [Populus trichocarpa]
Length = 557
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 272/422 (64%), Positives = 302/422 (71%), Gaps = 54/422 (12%)
Query: 1 MTKKRKNN--GSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGR 58
M KR+ + GS +K +V EQSS S G NPL+P Y+D D+E+E R
Sbjct: 1 MKNKREEDDMGSEVSGSVLKRQRVDEQSSAS----GIGNPLVP----YNDVDDEDEDFER 52
Query: 59 GDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQG----QRSRLVEVRRDCPYLDTVNRQ 114
G + G + + EDE++ + YGQG +R E R DCPYLDTVNRQ
Sbjct: 53 GKTNNGGGVEESNTQVVAAENGEDEEEEEDVYGQGDSLERRKSQFEPREDCPYLDTVNRQ 112
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINLRTEKVYC
Sbjct: 113 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYC 172
Query: 175 LPDGYEINDPSLEDIRHV---------------------------------GLNNIKETD 201
LPDGYEI DPSL+DIRHV GLNNIKETD
Sbjct: 173 LPDGYEIIDPSLDDIRHVLNPRFTRDQVGQIDKNRQWSRALDGSDYLPGMVGLNNIKETD 232
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
FVNVTIQSLMRVTPLRNFFLIPENY+HCKSPLV RFG+L RKIWHARNFKGQVSPHEFLQ
Sbjct: 233 FVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVQRFGELMRKIWHARNFKGQVSPHEFLQ 292
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKN 321
AVMK SKKRFRIG QS+PVEFM+WLLNTLH++LR +KKN SIIYECFQGELEV+KE P
Sbjct: 293 AVMKVSKKRFRIGQQSDPVEFMAWLLNTLHANLRTSKKNNSIIYECFQGELEVIKESPNK 352
Query: 322 TISGNDQNT------EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIP 375
I+ QN ++ +DG HD I TETSRM FLMLGLDLPPPPLFKDVMEKNIIP
Sbjct: 353 AITEKKQNADDQSSDQRITDGVTKHD-IFTETSRMQFLMLGLDLPPPPLFKDVMEKNIIP 411
Query: 376 QL 377
Q+
Sbjct: 412 QV 413
>gi|357110906|ref|XP_003557256.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like
[Brachypodium distachyon]
Length = 546
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/313 (75%), Positives = 259/313 (82%), Gaps = 34/313 (10%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE 158
VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKYYQGRG KSHAYTHSLE
Sbjct: 90 VELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAYTHSLE 149
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------- 192
AGHHV+INL+TE+VYCLPDGYEINDPSLEDIRHV
Sbjct: 150 AGHHVFINLQTERVYCLPDGYEINDPSLEDIRHVLNPRFAREQVLNLDKNKQWSRALDGS 209
Query: 193 -------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIW 245
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENY+H KSPLVHRFG+LTRKIW
Sbjct: 210 NYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYQHSKSPLVHRFGELTRKIW 269
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-KNTSII 304
HARNFKGQVSPHEFLQAVMKAS+K+F+IGVQS+PVEFMSWLLNTLH+ LR++K KN SII
Sbjct: 270 HARNFKGQVSPHEFLQAVMKASEKKFQIGVQSDPVEFMSWLLNTLHAKLRSSKRKNRSII 329
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
Y+CFQGELEVVKEI + I G++QN E S D + TETSR+PFLMLGLDLPPPPL
Sbjct: 330 YDCFQGELEVVKEIHRKHIVGDEQNGESSSQVETTSDGMVTETSRVPFLMLGLDLPPPPL 389
Query: 365 FKDVMEKNIIPQL 377
FKD MEKNIIPQ+
Sbjct: 390 FKDAMEKNIIPQV 402
>gi|326495966|dbj|BAJ90605.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 553
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/390 (66%), Positives = 297/390 (76%), Gaps = 46/390 (11%)
Query: 25 QSSPSPPRLGFEN---PLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDE 81
+++ PR G E+ LL LAN Y D++EEE RG + NGR E ++++ +E
Sbjct: 29 EAAEKRPRAGDESEGASLLGLAN-YADEEEEERGAPRGHA------NGRPREQEEDEDEE 81
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
+E+D + R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGK
Sbjct: 82 EEEDERRAPERRPRQ--VELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGK 139
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
YYQGRG KSHAYTHSLEAGHHV+INL+TEKVYCLPDGYEINDPSLEDIRHV
Sbjct: 140 YYQGRGLKSHAYTHSLEAGHHVFINLQTEKVYCLPDGYEINDPSLEDIRHVLNPRFAREQ 199
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENY+H
Sbjct: 200 VKILDKNKQWSRALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYQH 259
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
KSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKAS+K+F+IGVQS+PVEFMSWLLN
Sbjct: 260 SKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASEKKFQIGVQSDPVEFMSWLLN 319
Query: 289 TLHSDLRNT-KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTET 347
TLH+ LR++ KKN SIIY+CFQGELEVVKEI + + ++QN E S D + T+T
Sbjct: 320 TLHAKLRSSKKKNRSIIYDCFQGELEVVKEIHRKHLVDDEQNGEASSQVETTSDGMVTQT 379
Query: 348 SRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
SR+PFLMLGLDLPPPPLFKD MEKNIIPQ+
Sbjct: 380 SRVPFLMLGLDLPPPPLFKDAMEKNIIPQV 409
>gi|125605649|gb|EAZ44685.1| hypothetical protein OsJ_29311 [Oryza sativa Japonica Group]
Length = 554
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/322 (74%), Positives = 259/322 (80%), Gaps = 45/322 (13%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKYYQGRG KSHAY
Sbjct: 96 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAY 155
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 156 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTTEQVRNLDRNKQWSR 215
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENYRH KSPLVHRFG+L
Sbjct: 216 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYRHSKSPLVHRFGEL 275
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
TRKIWHARNFKGQVSPHEFLQAVMKAS KRF+IGVQS+PVEFMSWLLNT+HS L++ K+N
Sbjct: 276 TRKIWHARNFKGQVSPHEFLQAVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLKSRKRN 335
Query: 301 TSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
SII++CFQGELEVVKE K I G++QN + GSD I TETSR+PFLML
Sbjct: 336 RSIIHDCFQGELEVVKEFHKKHIVEKKEDGDEQNGDAGSD-------IVTETSRVPFLML 388
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
GLDLPPPPLFKD MEKNIIPQ+
Sbjct: 389 GLDLPPPPLFKDAMEKNIIPQV 410
>gi|125563679|gb|EAZ09059.1| hypothetical protein OsI_31320 [Oryza sativa Indica Group]
Length = 555
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/322 (74%), Positives = 259/322 (80%), Gaps = 45/322 (13%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKYYQGRG KSHAY
Sbjct: 97 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAY 156
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 157 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTTEQVRNLDRNKQWSR 216
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENYRH KSPLVHRFG+L
Sbjct: 217 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYRHSKSPLVHRFGEL 276
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
TRKIWHARNFKGQVSPHEFLQAVMKAS KRF+IGVQS+PVEFMSWLLNT+HS L++ K+N
Sbjct: 277 TRKIWHARNFKGQVSPHEFLQAVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLKSRKRN 336
Query: 301 TSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
SII++CFQGELEVVKE K I G++QN + GSD I TETSR+PFLML
Sbjct: 337 RSIIHDCFQGELEVVKEFHKKHIVEKKEDGDEQNGDAGSD-------IVTETSRVPFLML 389
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
GLDLPPPPLFKD MEKNIIPQ+
Sbjct: 390 GLDLPPPPLFKDAMEKNIIPQV 411
>gi|115479091|ref|NP_001063139.1| Os09g0407900 [Oryza sativa Japonica Group]
gi|51091509|dbj|BAD36247.1| putative U4/U6.U5 tri-snRNP-associated 65 kDa protein [Oryza sativa
Japonica Group]
gi|51091565|dbj|BAD36302.1| putative U4/U6.U5 tri-snRNP-associated 65 kDa protein [Oryza sativa
Japonica Group]
gi|113631372|dbj|BAF25053.1| Os09g0407900 [Oryza sativa Japonica Group]
gi|215678580|dbj|BAG92235.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/322 (74%), Positives = 259/322 (80%), Gaps = 45/322 (13%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKYYQGRG KSHAY
Sbjct: 96 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAY 155
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 156 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTTEQVRNLDRNKQWSR 215
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMR+TPLRNFFLIPENYRH KSPLVHRFG+L
Sbjct: 216 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRITPLRNFFLIPENYRHSKSPLVHRFGEL 275
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
TRKIWHARNFKGQVSPHEFLQAVMKAS KRF+IGVQS+PVEFMSWLLNT+HS L++ K+N
Sbjct: 276 TRKIWHARNFKGQVSPHEFLQAVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLKSRKRN 335
Query: 301 TSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
SII++CFQGELEVVKE K I G++QN + GSD I TETSR+PFLML
Sbjct: 336 RSIIHDCFQGELEVVKEFHKKHIVEKKEDGDEQNGDAGSD-------IVTETSRVPFLML 388
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
GLDLPPPPLFKD MEKNIIPQ+
Sbjct: 389 GLDLPPPPLFKDAMEKNIIPQV 410
>gi|224137344|ref|XP_002322534.1| predicted protein [Populus trichocarpa]
gi|222867164|gb|EEF04295.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 261/391 (66%), Positives = 287/391 (73%), Gaps = 58/391 (14%)
Query: 24 EQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKV----GQNGRTGEDDDEDK 79
EQSS S G ENPL+P N DD++E+ E G + G +V GQ ++E++
Sbjct: 17 EQSSAS----GIENPLVPY-NDVDDEEEDFERGRTANGGGRVEENRGQVVAAENGEEEEE 71
Query: 80 DEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 139
+E+ED +R E R DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC
Sbjct: 72 EEEEDLYGEENSLEKRKSQFEPREDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 131
Query: 140 GKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------- 192
GKYYQGRG+KSHAYTHSLEAGHHVY+NLRTEKVYCLPDGYEI DPSL+DIRHV
Sbjct: 132 GKYYQGRGKKSHAYTHSLEAGHHVYVNLRTEKVYCLPDGYEIIDPSLDDIRHVLNPRFTR 191
Query: 193 --------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY
Sbjct: 192 DQVKQLDKNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 251
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
+HCKSPLV R+G+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG QS+PVEFM+WL
Sbjct: 252 QHCKSPLVQRYGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMAWL 311
Query: 287 LNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE 346
LNTLH++LR KKN SIIYECFQGELEVVKEIP I+ +N E
Sbjct: 312 LNTLHTNLRTLKKNNSIIYECFQGELEVVKEIPNKAITEKKEN----------------E 355
Query: 347 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 356 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 386
>gi|242093968|ref|XP_002437474.1| hypothetical protein SORBIDRAFT_10g027800 [Sorghum bicolor]
gi|241915697|gb|EER88841.1| hypothetical protein SORBIDRAFT_10g027800 [Sorghum bicolor]
Length = 549
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/361 (67%), Positives = 272/361 (75%), Gaps = 63/361 (17%)
Query: 79 KDEDEDDLANGYGQGQRS-----------------------RLVEVRRDCPYLDTVNRQV 115
+DEDED+ A G+ G+R+ R E+RRDCPYLDTVNRQV
Sbjct: 46 EDEDEDEAARGHANGRRAVEPDEEEDDDEEDDVRRAPERRPRQAELRRDCPYLDTVNRQV 105
Query: 116 LDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCL 175
LDFDFEKFCS+SLSNLNVYACLVCGKY+QGRG KSHAYTHSLEAGHHV+INL+TEK YCL
Sbjct: 106 LDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAYTHSLEAGHHVFINLQTEKAYCL 165
Query: 176 PDGYEINDPSLEDIRHV---------------------------------GLNNIKETDF 202
PDGYEINDPSLEDIRHV GLNNIKETDF
Sbjct: 166 PDGYEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSRALDGSNYLPGMVGLNNIKETDF 225
Query: 203 VNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQA 262
VNVTIQSLMRVTPLRNFFLIPENY+H KSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQA
Sbjct: 226 VNVTIQSLMRVTPLRNFFLIPENYQHRKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQA 285
Query: 263 VMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQGELEVVKEIPKN 321
VMKAS KRF+IGVQS+PVEFMSWLLNTLH+ L+++ KKN SII++CFQGELEVVKE+ +
Sbjct: 286 VMKASDKRFQIGVQSDPVEFMSWLLNTLHAKLKSSKKKNRSIIHDCFQGELEVVKEVHRK 345
Query: 322 TI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ 376
I G++ N E GS G D I TETS++PFLMLGLDLPPPPLFKD MEKNIIPQ
Sbjct: 346 HIMEKREDGDEPNGEAGSVVGTA-DGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIPQ 404
Query: 377 L 377
+
Sbjct: 405 V 405
>gi|22328871|ref|NP_193966.2| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
gi|18087625|gb|AAL58942.1|AF462856_1 AT4g22410/F7K2_7 [Arabidopsis thaliana]
gi|33589748|gb|AAQ22640.1| At4g22410/F7K2_7 [Arabidopsis thaliana]
gi|332659198|gb|AEE84598.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
Length = 510
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/403 (63%), Positives = 285/403 (70%), Gaps = 80/403 (19%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQ 67
NG ++E+R VK +V+E+S PP PL+ G G+ G KV
Sbjct: 9 NGVSEEEREVKRKRVMERSDSPPP------PLVA--------------KGEGN-GNKV-- 45
Query: 68 NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVS 127
GE E D+++DD G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+FCSVS
Sbjct: 46 ---KGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVS 102
Query: 128 LSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLE 187
LSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDPSL+
Sbjct: 103 LSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLD 162
Query: 188 DIRHV---------------------------------GLNNIKETDFVNVTIQSLMRVT 214
DIRHV GLNNI++T+FVNVTIQSLMRVT
Sbjct: 163 DIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVT 222
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
PLRNFFLIPENY+HCKSPL HRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG
Sbjct: 223 PLRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 282
Query: 275 VQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
QS+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE GN+
Sbjct: 283 QQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE-----YQGNE------- 330
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
E SRMPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 331 ---------NKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 364
>gi|413934601|gb|AFW69152.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 551
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/323 (73%), Positives = 260/323 (80%), Gaps = 40/323 (12%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKY+QGRG KSHAY
Sbjct: 86 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAY 145
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 146 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSR 205
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+H KSPLVHRFG+L
Sbjct: 206 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHSKSPLVHRFGEL 265
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KK 299
TRKIWHARNFKGQVSPHEFLQAVMKAS K+F+IGVQS+PVEFM+WLLNTLH+ L+++ KK
Sbjct: 266 TRKIWHARNFKGQVSPHEFLQAVMKASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKK 325
Query: 300 NTSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
N SII++CFQGELEVVKE+ + I G + N E GS G D I TETS++PFLM
Sbjct: 326 NRSIIHDCFQGELEVVKEVHRKHIMEKREDGGELNGEAGSVVGTA-DGIVTETSKVPFLM 384
Query: 355 LGLDLPPPPLFKDVMEKNIIPQL 377
LGLDLPPPPLFKD MEKNIIPQ+
Sbjct: 385 LGLDLPPPPLFKDAMEKNIIPQV 407
>gi|226497272|ref|NP_001152034.1| LOC100285671 [Zea mays]
gi|195652005|gb|ACG45470.1| USP39 protein [Zea mays]
Length = 552
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/323 (73%), Positives = 260/323 (80%), Gaps = 40/323 (12%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKY+QGRG KSHAY
Sbjct: 86 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAY 145
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 146 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSR 205
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+H KSPLVHRFG+L
Sbjct: 206 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHSKSPLVHRFGEL 265
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KK 299
TRKIWHARNFKGQVSPHEFLQAVMKAS K+F+IGVQS+PVEFM+WLLNTLH+ L+++ KK
Sbjct: 266 TRKIWHARNFKGQVSPHEFLQAVMKASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKK 325
Query: 300 NTSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
N SII++CFQGELEVVKE+ + I G + N E GS G D I TETS++PFLM
Sbjct: 326 NRSIIHDCFQGELEVVKEVHRKHIMEKREDGGELNGEAGSVVGTA-DGIVTETSKVPFLM 384
Query: 355 LGLDLPPPPLFKDVMEKNIIPQL 377
LGLDLPPPPLFKD MEKNIIPQ+
Sbjct: 385 LGLDLPPPPLFKDAMEKNIIPQV 407
>gi|413934600|gb|AFW69151.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 552
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/323 (73%), Positives = 260/323 (80%), Gaps = 40/323 (12%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R R VE+RRDCPYLDTVNRQVLDFDFEKFCS+SLSNLNVYACLVCGKY+QGRG KSHAY
Sbjct: 86 RRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSISLSNLNVYACLVCGKYFQGRGLKSHAY 145
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THSLEAGHHV+INL+TEK YCLPDGYEINDPSLEDIRHV
Sbjct: 146 THSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIRHVLNPRFTKEQVLNLDKNKQWSR 205
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY+H KSPLVHRFG+L
Sbjct: 206 ALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHSKSPLVHRFGEL 265
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KK 299
TRKIWHARNFKGQVSPHEFLQAVMKAS K+F+IGVQS+PVEFM+WLLNTLH+ L+++ KK
Sbjct: 266 TRKIWHARNFKGQVSPHEFLQAVMKASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKK 325
Query: 300 NTSIIYECFQGELEVVKEIPKNTI-----SGNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
N SII++CFQGELEVVKE+ + I G + N E GS G D I TETS++PFLM
Sbjct: 326 NRSIIHDCFQGELEVVKEVHRKHIMEKREDGGELNGEAGSVVGTA-DGIVTETSKVPFLM 384
Query: 355 LGLDLPPPPLFKDVMEKNIIPQL 377
LGLDLPPPPLFKD MEKNIIPQ+
Sbjct: 385 LGLDLPPPPLFKDAMEKNIIPQV 407
>gi|297799780|ref|XP_002867774.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313610|gb|EFH44033.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 506
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/403 (62%), Positives = 279/403 (69%), Gaps = 84/403 (20%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQ 67
NG ++++R VK +V+E+S PP LG E G G V
Sbjct: 9 NGVSEDEREVKRKRVMERSDSPPPPLG-------------------EGNGNKVRGEVVDD 49
Query: 68 NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVS 127
+DD+ K G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+FCSVS
Sbjct: 50 EDDDDDDDEASK-----------GRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVS 98
Query: 128 LSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLE 187
LSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDPSL+
Sbjct: 99 LSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLD 158
Query: 188 DIRHV---------------------------------GLNNIKETDFVNVTIQSLMRVT 214
DIRHV GLNNI++T+FVNVTIQSLMRVT
Sbjct: 159 DIRHVLNPRFSRAQVEELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVT 218
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
PLRNFFLIPENY+HCKSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG
Sbjct: 219 PLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 278
Query: 275 VQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
QS+PVEFMSWLLNTLH DL+ +K +SII++CFQGELEVV+E GN+
Sbjct: 279 QQSDPVEFMSWLLNTLHMDLKTSKDASSIIHKCFQGELEVVRE-----YQGNE------- 326
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
E SRMPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 327 ---------NKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 360
>gi|168000765|ref|XP_001753086.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695785|gb|EDQ82127.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 450
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 250/325 (76%), Gaps = 62/325 (19%)
Query: 92 QGQRSRL-----VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGR 146
+ +RSR +E+R+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY+QGR
Sbjct: 5 EAERSRAGLRRDIELRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGR 64
Query: 147 GQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--------------- 191
G+KSHAYTHSLEAGHHV+INL TEKVYCLPDGYE+NDPSL+DIRH
Sbjct: 65 GRKSHAYTHSLEAGHHVFINLHTEKVYCLPDGYEVNDPSLDDIRHVLNPRFTRAQAEQLD 124
Query: 192 ------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPL 233
VG+NNIKE DFVNVTIQSLMRVTPLRN+FL+PENY+HCKSPL
Sbjct: 125 KIKQWSRALDGSDYLPGMVGINNIKENDFVNVTIQSLMRVTPLRNYFLLPENYKHCKSPL 184
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V RFG+LT+KIWH +NFKGQVSPHEFLQAVM ASKKRFRIGVQS+PVEFMSWLLNTLH+D
Sbjct: 185 VQRFGELTKKIWHTKNFKGQVSPHEFLQAVMVASKKRFRIGVQSDPVEFMSWLLNTLHTD 244
Query: 294 LRNTKK-NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
L TKK N+S+IY+CFQGELEV KE T+K D S+MPF
Sbjct: 245 LGGTKKRNSSVIYKCFQGELEVTKE------------TQKKGD-----------VSKMPF 281
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQL 377
LMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 282 LMLGLDLPPPPLFKDVMEKNIIPQI 306
>gi|302771339|ref|XP_002969088.1| hypothetical protein SELMODRAFT_90860 [Selaginella moellendorffii]
gi|302784408|ref|XP_002973976.1| hypothetical protein SELMODRAFT_100186 [Selaginella moellendorffii]
gi|300158308|gb|EFJ24931.1| hypothetical protein SELMODRAFT_100186 [Selaginella moellendorffii]
gi|300163593|gb|EFJ30204.1| hypothetical protein SELMODRAFT_90860 [Selaginella moellendorffii]
Length = 458
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/312 (71%), Positives = 244/312 (78%), Gaps = 54/312 (17%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY+QGRG+KSHAYTHSLEA
Sbjct: 23 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGRKSHAYTHSLEA 82
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
GHHV+INL +EKVYCLPDGYE++DPSL+DIRHV
Sbjct: 83 GHHVFINLHSEKVYCLPDGYEVDDPSLDDIRHVLNPRFTGAQVSQLDKSKQWARALDGSD 142
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWH 246
GLNNIKETDFVNV IQSLMRVTPLR+FFLIPENYRH SPLVHRFG+LTRKIWH
Sbjct: 143 YLPGMVGLNNIKETDFVNVIIQSLMRVTPLRDFFLIPENYRHSSSPLVHRFGELTRKIWH 202
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-KNTSIIY 305
ARNFKGQVSPHEFLQA+M ASKK+FRIGVQS+PVEF SWLLNTLHS+L T +N+SIIY
Sbjct: 203 ARNFKGQVSPHEFLQAIMSASKKKFRIGVQSDPVEFFSWLLNTLHSELGGTTLRNSSIIY 262
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
+CFQGELEV+KE+ +D N E SR+PFLMLGLDLPPPPLF
Sbjct: 263 QCFQGELEVLKEL------QSDPNNR--------------EISRLPFLMLGLDLPPPPLF 302
Query: 366 KDVMEKNIIPQL 377
KDVMEKNIIPQ+
Sbjct: 303 KDVMEKNIIPQV 314
>gi|294463557|gb|ADE77307.1| unknown [Picea sitchensis]
Length = 336
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/313 (67%), Positives = 231/313 (73%), Gaps = 57/313 (18%)
Query: 36 ENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQR 95
+N LLPLA S + +D++D+DE NG Q +R
Sbjct: 43 DNGLLPLA-----------------SYGDDDDDEDGYGEDEDDRDE------NGAVQERR 79
Query: 96 SRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH 155
RLVE+R+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+ SHAYTH
Sbjct: 80 QRLVEIRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGRNSHAYTH 139
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------ 191
SLEAGHHVYINLRTEK YCLPDGYE+NDPSL+DIRH
Sbjct: 140 SLEAGHHVYINLRTEKAYCLPDGYEVNDPSLDDIRHVLNPRFSREQVEQLDTIKQWSRAL 199
Query: 192 ---------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTR 242
VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY++CKSPLVHRFG+LTR
Sbjct: 200 DGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQNCKSPLVHRFGELTR 259
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
KIWH+RNFKGQVSPHEFLQAVM ASKKRFRIG QS+PVEFMSWLLNTLH+DL TKK N+
Sbjct: 260 KIWHSRNFKGQVSPHEFLQAVMVASKKRFRIGAQSDPVEFMSWLLNTLHADLGGTKKSNS 319
Query: 302 SIIYECFQGELEV 314
SIIY+CFQ L +
Sbjct: 320 SIIYKCFQVVLLI 332
>gi|15235641|ref|NP_193972.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
gi|5738372|emb|CAB52815.1| putative protein [Arabidopsis thaliana]
gi|7269087|emb|CAB79196.1| putative protein [Arabidopsis thaliana]
gi|332659205|gb|AEE84605.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
Length = 340
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/300 (70%), Positives = 227/300 (75%), Gaps = 54/300 (18%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
V QVLDF FE+FCSVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TE
Sbjct: 2 VEFQVLDFHFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTE 61
Query: 171 KVYCLPDGYEINDPSLEDIRHV---------------------------------GLNNI 197
KVYCLPD YEINDPSL+DIRHV GLNNI
Sbjct: 62 KVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNI 121
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
++T+FVNVTIQSLMRVTPLRNFF IPENY+HCKSPLVH FG+LTRKIWHARNFKGQVSPH
Sbjct: 122 QKTEFVNVTIQSLMRVTPLRNFFHIPENYQHCKSPLVHCFGELTRKIWHARNFKGQVSPH 181
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKE 317
EFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE
Sbjct: 182 EFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE 241
Query: 318 IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
GN+ E SRM FLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 242 -----FQGNENK----------------EISRMSFLMLGLDLPPPPLFKDVMEKNIIPQV 280
>gi|2832679|emb|CAA16779.1| putative protein [Arabidopsis thaliana]
gi|7269075|emb|CAB79184.1| putative protein [Arabidopsis thaliana]
Length = 974
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 227/400 (56%), Positives = 272/400 (68%), Gaps = 52/400 (13%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDD-----DEEEEYGGRGDSG 62
NG ++E+R VK +V+E+S PP LGF NPLLPLANTYDDD +E+++ RG+
Sbjct: 440 NGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKKSQARGNGV 499
Query: 63 AKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEK 122
AK NG + + +++ +D++D G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+
Sbjct: 500 AKGEGNGNKVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQVLDFDFER 559
Query: 123 FCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIN 182
FCSVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEIN
Sbjct: 560 FCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEIN 619
Query: 183 DPSLEDIRHVGLN--NIKETDFVNVTIQS-----------LMRVTPLRNFFLIPENYRHC 229
DPSL+DIRHV LN I+ D+ + + + + ++ L F LI +
Sbjct: 620 DPSLDDIRHV-LNPRYIRSCDYYFIVLTAFCVLICEHLEHITLLSCLVKFSLILQFLFMK 678
Query: 230 KSPL-VHRFG-----------DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
S L ++RF +R + + G VSPHEFLQAVMKASKKRFRIG QS
Sbjct: 679 ASVLSIYRFSRAQVNELDKNRQWSRALDGSDYLPGMVSPHEFLQAVMKASKKRFRIGQQS 738
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG 337
+PVEFMSWLLNTLH DLR +K +SII++CFQGELEVVKE GN+
Sbjct: 739 DPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKE-----FQGNENK-------- 785
Query: 338 DDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
E SRM FLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 786 --------EISRMSFLMLGLDLPPPPLFKDVMEKNIIPQV 817
>gi|2832685|emb|CAA16785.1| putative protein [Arabidopsis thaliana]
gi|7269081|emb|CAB79190.1| putative protein [Arabidopsis thaliana]
Length = 477
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 220/373 (58%), Positives = 250/373 (67%), Gaps = 53/373 (14%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYG-GRGDSGAKVG 66
NG ++E+R VK +V+E+S PP LGF NPLLP AN YDDD+ ++ R + AK
Sbjct: 9 NGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPFANAYDDDNNQQNKSQTRCNVVAKGE 68
Query: 67 QNGRT--GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFC 124
NG GE E D+++DD G+G+ SR VEVRRDCPYLDTVNRQVLDFDFE+FC
Sbjct: 69 GNGNKVKGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVLDFDFERFC 128
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
SVSLSNLNVYACLVCGKY+QGR QKSHAYTHSLEAGHHVYINL TEKVYCLPD YEINDP
Sbjct: 129 SVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDP 188
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKI 244
SL+DIRHV LN F + L + +R +
Sbjct: 189 SLDDIRHV-LN----PRFSRAQVNEL------------------------DKNRQWSRAL 219
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
+ G VSPHEFLQAVMKASKKRFRIG QS+PVEFMSWLLNTLH DLR +K +SII
Sbjct: 220 DGSDYLPGMVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSII 279
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
++CFQGELEVVKE GN+ E SRMPFLMLGLDLPPPPL
Sbjct: 280 HKCFQGELEVVKE-----YQGNE----------------NKEISRMPFLMLGLDLPPPPL 318
Query: 365 FKDVMEKNIIPQL 377
FKDVMEKNIIPQ+
Sbjct: 319 FKDVMEKNIIPQV 331
>gi|384247659|gb|EIE21145.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 484
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 177/338 (52%), Positives = 219/338 (64%), Gaps = 52/338 (15%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
DDD D DE L +R+ V +CPYLDTV+RQ LDFDFEK CSVSLS +NV
Sbjct: 17 DDDSDLDEPVQPL-------RRASQVRKGHECPYLDTVSRQNLDFDFEKCCSVSLSPVNV 69
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
YACLVCGKY+QGRGQ++HA+TH+LE GHH+++ L +VYCLP+GYE++D SL+ IR+V
Sbjct: 70 YACLVCGKYFQGRGQQTHAFTHALETGHHMFMKLSDGRVYCLPEGYEVDDRSLDAIRYVL 129
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GLNN+K D+VNV +Q+L+RV PLRNFF
Sbjct: 130 NPTFTPEKIASLDTDARWVRSLDGSEYMPGLVGLNNMKANDYVNVIVQALLRVLPLRNFF 189
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+PENY CKS LV RFG+L RK + RNFKGQVSPHEF+QAVM AS K+F I QS+PV
Sbjct: 190 LLPENYASCKSQLVQRFGELLRKACNPRNFKGQVSPHEFMQAVMTASAKKFTIEKQSDPV 249
Query: 281 EFMSWLLNTLHSDLRNTK-KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD 339
+F+SW LN LH+DL K K SII CFQGELE+ T+ + G+
Sbjct: 250 DFLSWFLNMLHADLTGGKRKKASIISRCFQGELEI-------TVEAGTGKAAVPNAAGEV 302
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
D + R+PFLML LDLPP PL+KD +EKNIIPQ+
Sbjct: 303 RDVV----ERVPFLMLALDLPPAPLYKDALEKNIIPQV 336
>gi|302829829|ref|XP_002946481.1| ubiquitin-specific protease 39 [Volvox carteri f. nagariensis]
gi|300268227|gb|EFJ52408.1| ubiquitin-specific protease 39 [Volvox carteri f. nagariensis]
Length = 474
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 204/305 (66%), Gaps = 44/305 (14%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
+CPYLDT++RQ LDFDFEK CSV+LS +NVY CLVCGKY+QGRG +HAYTHSLE+ HH+
Sbjct: 31 ECPYLDTISRQNLDFDFEKCCSVTLSPVNVYVCLVCGKYFQGRGLNTHAYTHSLESAHHM 90
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------G 193
++ L KVYCLPD YE+ D SL+DIRHV G
Sbjct: 91 FMKLDNGKVYCLPDNYEVLDKSLDDIRHVRDPLFRTEEIASLDNSSSISRLLSYMPGLVG 150
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNN+K D++NV +Q R+TPLR+FFL P NY C+SPLV RFG+L RK+W+ RNFKGQ
Sbjct: 151 LNNMKNNDYINVIMQICARITPLRDFFLDPANYSDCRSPLVQRFGELLRKMWNTRNFKGQ 210
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGEL 312
VSPHEF+QAV ASKKRF Q +PVE SWLLN LH DL R K SII +C QGEL
Sbjct: 211 VSPHEFVQAVRNASKKRFTADTQCDPVELWSWLLNNLHLDLTRGKPKKPSIITQCLQGEL 270
Query: 313 EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
EV T++G + T + G D T R+PFL+LGL+LPP PLFKDV+EKN
Sbjct: 271 EV------TTLAGTGRGTRAATSGED-------VTERVPFLLLGLELPPAPLFKDVLEKN 317
Query: 373 IIPQL 377
IIPQ+
Sbjct: 318 IIPQV 322
>gi|307102449|gb|EFN50724.1| hypothetical protein CHLNCDRAFT_33393 [Chlorella variabilis]
Length = 513
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 206/336 (61%), Gaps = 70/336 (20%)
Query: 96 SRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH 155
SR V +CPYLDT++RQ LDFDFEK CSV+LS NVYACLVCGKY+QGRG + AYTH
Sbjct: 51 SRSVRKGAECPYLDTISRQNLDFDFEKCCSVTLSGHNVYACLVCGKYFQGRGPSTQAYTH 110
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------- 192
+LEAGHH+++ + + +VYCLPD YE+ D SL DI++V
Sbjct: 111 ALEAGHHMFMKVESGRVYCLPDMYEVQDRSLADIQYVLNPTFTAEDVSKLDGGVSWARAL 170
Query: 193 ----------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTR 242
GLNN+K+ D+ NV +Q+L+RV P+R+FFL PENY C+S LV RFG+L R
Sbjct: 171 DGSEYMPGLVGLNNMKQNDYANVVVQALIRVWPIRDFFLRPENYASCQSLLVQRFGELVR 230
Query: 243 KIWHARNFKGQVSPHEFLQ--------------------AVMKASKKRFRIGVQSNPVEF 282
K+W+ R FKGQVSPHEF+Q AVM AS KR I QS+P+EF
Sbjct: 231 KVWNPRAFKGQVSPHEFMQARGSWLLARSSWHAAAGSCRAVMSASSKRLIIDRQSDPLEF 290
Query: 283 MSWLLNTLHSDLRNTK-KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHD 341
+SWL+N+LH DL K K S+I +C QGELEVV TE G+ G +
Sbjct: 291 LSWLVNSLHLDLTGGKRKKRSVITDCLQGELEVV--------------TEAGT--GKAKE 334
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
I +PFLMLGLDLP PLFKD +EK IIPQ+
Sbjct: 335 AIKDVIDHVPFLMLGLDLPAAPLFKDALEKVIIPQV 370
>gi|255072647|ref|XP_002499998.1| predicted protein [Micromonas sp. RCC299]
gi|226515260|gb|ACO61256.1| predicted protein [Micromonas sp. RCC299]
Length = 483
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/322 (52%), Positives = 197/322 (61%), Gaps = 70/322 (21%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDTVNR +LDFDFEK CSVSL NVYACLVCGKY+QGRG +HAY H+LEA HHV+
Sbjct: 21 CPYLDTVNRSLLDFDFEKCCSVSLVPHNVYACLVCGKYFQGRGPSTHAYVHALEATHHVF 80
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------------- 192
+NL T +VYCLPD YE+ D SL+DIRHV
Sbjct: 81 MNLDTGRVYCLPDMYEVVDASLDDIRHVLNPKFTSPQIAEVDHRRLWSRGLDGTDYLTGA 140
Query: 193 -GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY---------------RHCKSPLVHR 236
GLNN++ TD+VNV +QSLMRV P+R+FFL SPL R
Sbjct: 141 VGLNNLRATDYVNVVLQSLMRVGPVRDFFLAQRELGVSGAGGGGAGGAGPGPAASPLARR 200
Query: 237 FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN 296
FG+LTRKIW++RNFKGQVSPHEF+QAV+ AS +RF I QS+PVEF+SWLLNTL++DL
Sbjct: 201 FGELTRKIWNSRNFKGQVSPHEFMQAVLAASDRRFLIDKQSDPVEFLSWLLNTLNADLSG 260
Query: 297 TKK-NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
K+ SI+ CFQGELEV T G DD RMPF ML
Sbjct: 261 KKRGGKSIVSRCFQGELEV---------------TNAGLAYQDD------PPVRMPFFML 299
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
LDLP PLF+D MEKN IPQ+
Sbjct: 300 SLDLPAAPLFQDAMEKNTIPQV 321
>gi|330842890|ref|XP_003293401.1| hypothetical protein DICPUDRAFT_41968 [Dictyostelium purpureum]
gi|325076271|gb|EGC30071.1| hypothetical protein DICPUDRAFT_41968 [Dictyostelium purpureum]
Length = 472
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 162/343 (47%), Positives = 212/343 (61%), Gaps = 44/343 (12%)
Query: 71 TGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 130
T E+DD+D D L + + V+ R+DCPYLDTV+R VLDFDFEK CS+S N
Sbjct: 2 TNENDDDDFDLATYKL--------KKKHVKARKDCPYLDTVDRSVLDFDFEKICSISFHN 53
Query: 131 LNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR 190
NVYACLVCGKY+QG+ Q SHA H L+ GHHV+INL+T+++YCLPD YE+ D SL+DI+
Sbjct: 54 HNVYACLVCGKYFQGKSQDSHANYHCLQTGHHVFINLKTQQIYCLPDDYEVIDSSLDDIK 113
Query: 191 H---------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
+ +GLNN+K T +VNV IQSL R+ +R
Sbjct: 114 YLLNPTFTTEQIKELDKNTKNSKALDGSFYLPGIIGLNNLKNTSYVNVIIQSLARIPTIR 173
Query: 218 NFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
++ L N +CKS LV F +L RKIW+ RNFK QVSPHE LQA+ AS+K+F I +
Sbjct: 174 DYLLDFNNISNCKSILVQSFSELLRKIWNPRNFKPQVSPHELLQAIQNASQKKFNIRETA 233
Query: 278 NPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDG 336
+P+EF+ W LNTLH DL TK+ N+SIIY+ G++EV E P +D + + DG
Sbjct: 234 DPLEFLQWFLNTLHRDLGGTKQPNSSIIYKALSGQIEVTTEKPIKNDDDSDDSDSEMKDG 293
Query: 337 GDDHDNI--TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ +T T R PFL L LDLPP +FKD EK+IIPQ+
Sbjct: 294 NKSKKPVQYSTSTMRNPFLFLTLDLPPKQIFKDSQEKSIIPQV 336
>gi|189235059|ref|XP_974413.2| PREDICTED: similar to ubiquitin specific protease 39 and snrnp
assembly factor [Tribolium castaneum]
gi|270003988|gb|EFA00436.1| hypothetical protein TcasGA2_TC003290 [Tribolium castaneum]
Length = 501
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/320 (50%), Positives = 201/320 (62%), Gaps = 48/320 (15%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
+ R CPYLDT+NRQ LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+
Sbjct: 43 QTHRLCPYLDTINRQYLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVAE 102
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
GHHV++NL T K YCLPD YEI D SL+DI++
Sbjct: 103 GHHVFLNLHTLKFYCLPDNYEIIDSSLDDIKYLLNPTFTEQHISTLDVSTKMSRAIDGLL 162
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
VGLNNIK D+ NV +Q+L RV PLRN+FL ENY K P LV R+G+
Sbjct: 163 YMPGIVGLNNIKANDYCNVVLQALSRVVPLRNYFLREENYSKIKRPPGDSSYLLVQRYGE 222
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTK 298
L RK+W+ RNFK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN LH L N K
Sbjct: 223 LMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQITAQGDPIDFLSWFLNALHRALNGNKK 282
Query: 299 KNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
KN+SIIY+ F G +++ ++IP + D ++ ++ I TE+ PFL L
Sbjct: 283 KNSSIIYQSFLGNMKIYTRKIPPTEL---DDRQKRMLLSTPEYQEIITES---PFLYLTC 336
Query: 358 DLPPPPLFKDVMEKNIIPQL 377
DLPPPPLF D +NIIPQ+
Sbjct: 337 DLPPPPLFIDEFRENIIPQV 356
>gi|291234279|ref|XP_002737076.1| PREDICTED: ubiquitin specific peptidase 39-like [Saccoglossus
kowalevskii]
Length = 455
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/317 (50%), Positives = 200/317 (63%), Gaps = 48/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R+CPYLDT+NR VLDFDFEK CSV LS++NVYACL+CGKY+QGRG KSHAYTHS+E HH
Sbjct: 22 RNCPYLDTINRNVLDFDFEKLCSVCLSHINVYACLICGKYFQGRGLKSHAYTHSVEVDHH 81
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
VY+NL T K YCLPD YE+ D SL+DI++V
Sbjct: 82 VYLNLHTLKFYCLPDNYEVIDSSLDDIKYVLKPTFTRLQIYHMDKTSKLSRAYDGSTYLP 141
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK+ D+ NV + + V PLRN+FL ENY H K P L RFG+L R
Sbjct: 142 GVVGLNNIKKNDYCNVILHAFAHVPPLRNYFLREENYAHIKRPPGDIMILLSQRFGELMR 201
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK+++I Q +PVEFMSW LN LH L KKN+
Sbjct: 202 KMWNPRNFKAHVSPHEMLQAVVLCSKKKYQITSQGDPVEFMSWFLNALHIALNGGKKKNS 261
Query: 302 SIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SI+Y+ FQG + + +++P + ++ S+ D TS PFL L LD+P
Sbjct: 262 SIVYKTFQGSMRIYSRKLPPADVEDLEKQALIQSEEYQD------TTSDSPFLYLMLDIP 315
Query: 361 PPPLFKDVMEKNIIPQL 377
P PLFKD +E+NIIPQ+
Sbjct: 316 PAPLFKDELEQNIIPQV 332
>gi|66828951|ref|XP_647829.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
AX4]
gi|60470085|gb|EAL68066.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
AX4]
Length = 718
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/319 (48%), Positives = 202/319 (63%), Gaps = 36/319 (11%)
Query: 95 RSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
+ + ++ R+DCPYLDTVNR VLDFDFEK CSVS N NVYACLVCGKY+QG+ Q SHA
Sbjct: 264 KKKQIKTRKDCPYLDTVNRDVLDFDFEKVCSVSFHNHNVYACLVCGKYFQGKSQDSHANY 323
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH----------------------- 191
H L+ HHV+INL+T+++YCLPD YE+ D SL+DI++
Sbjct: 324 HCLQMDHHVFINLKTQQIYCLPDDYEVIDSSLDDIKYLLNPTFTNDQIKELDRNSKLSRA 383
Query: 192 ----------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT 241
VGLNNIK T +VNV IQSL R+ +RNF L +N + KSPLV +L
Sbjct: 384 LDDSKYLPGIVGLNNIKNTAYVNVIIQSLARIPTIRNFLLNVDNIKTNKSPLVLTLSELL 443
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-N 300
RKIW+ +NFK QVSPHE LQA+ +S+KRF I S+P++F+ W LNTLH DL TK+ N
Sbjct: 444 RKIWNPKNFKAQVSPHELLQAIQNSSQKRFNIRESSDPLDFLPWFLNTLHKDLGGTKQPN 503
Query: 301 TSIIYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
+SIIY+ F GE+++ K IPK+ + + + TS+ PFL L LD
Sbjct: 504 SSIIYKAFSGEIQITTDKPIPKSVDDDSSDYDNDDGENKKLKTKYSNSTSKQPFLFLTLD 563
Query: 359 LPPPPLFKDVMEKNIIPQL 377
LPP P+FKD +K+IIPQ+
Sbjct: 564 LPPKPIFKDDQDKSIIPQI 582
>gi|303272677|ref|XP_003055700.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463674|gb|EEH60952.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 501
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/325 (54%), Positives = 210/325 (64%), Gaps = 60/325 (18%)
Query: 87 ANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGR 146
A+ +R R RDCPYLDTVNR +LDFDFEK CSVSLS NVYACLVCGKY+ GR
Sbjct: 40 ASRLAAERRERANRASRDCPYLDTVNRALLDFDFEKCCSVSLSPNNVYACLVCGKYFAGR 99
Query: 147 GQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------- 192
G +HAYTHSLEA HHV++NL T KVYCLPD YEI D SL+DIRHV
Sbjct: 100 GPNTHAYTHSLEATHHVFMNLHTGKVYCLPDAYEIVDRSLDDIRHVLDPTFTPAQIEETE 159
Query: 193 -------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPL 233
GLNN+K TD+VNV +Q+LMRV P+RNFFL + +S L
Sbjct: 160 TKKMWSRGLDGTDYLTGAIGLNNLKATDYVNVVLQALMRVKPVRNFFLSDD-----QSLL 214
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V RFG+LTRKIW++RNFKGQVSPHEF+QAV+ +S++RF + QS+PV+FM+WLLNTLH D
Sbjct: 215 VQRFGELTRKIWNSRNFKGQVSPHEFMQAVLASSRRRFLVDKQSDPVDFMTWLLNTLHRD 274
Query: 294 LR-NTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
L K +S+I CFQGELEV T G G T E+++MPF
Sbjct: 275 LSGKMKGGSSVINHCFQGELEV---------------TSVGRPGE------TGESAKMPF 313
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQL 377
L LDLPPPPLF+D ME N IPQ+
Sbjct: 314 YTLALDLPPPPLFQDAMENNFIPQV 338
>gi|390335093|ref|XP_001185686.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2
[Strongylocentrotus purpuratus]
Length = 517
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 160/316 (50%), Positives = 198/316 (62%), Gaps = 46/316 (14%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CSVSLS+LNVYACLVCGKY+QGRGQKSHAYTHS+ HH
Sbjct: 43 RSCPYLDTINRGLLDFDFEKLCSVSLSHLNVYACLVCGKYFQGRGQKSHAYTHSVYINHH 102
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 103 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKKQIKLLDKDPKTCRAYDTTMYTA 162
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIKE D+ NV + +L V P+RN+FL ENY K P L RFG+L R
Sbjct: 163 GIVGLNNIKENDYCNVLLHALSGVVPMRNYFLREENYGDIKLPPGNIMSILSQRFGELMR 222
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQA++ SKKRF+I Q +PV+ +SW +N LHS L TKK N+
Sbjct: 223 KMWNQRNFKAHVSPHEMLQAIVLCSKKRFQITEQGDPVDVLSWFINALHSSLAGTKKHNS 282
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
SI+Y+ FQG +++ K + + + EK + T + PFL L LD+PP
Sbjct: 283 SIVYKTFQGRMKI---FTKKVLPADVSDEEKAKLLKTEEYKETEQDQ--PFLFLSLDIPP 337
Query: 362 PPLFKDVMEKNIIPQL 377
PLFKD +E+NIIPQ+
Sbjct: 338 APLFKDELEQNIIPQV 353
>gi|350415794|ref|XP_003490754.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated
protein 2-like [Bombus impatiens]
Length = 508
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/333 (47%), Positives = 205/333 (61%), Gaps = 52/333 (15%)
Query: 91 GQGQRSRLV----EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGR 146
G ++++++ E R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGR
Sbjct: 24 GIAKKAKIIKTNSEAPRLCPYLDTINRQFLDFDFEKLCSVSLSKINVYACLVCGKYFQGR 83
Query: 147 GQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------- 192
G +HAYTHS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 84 GTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIAQLD 143
Query: 193 -------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP- 232
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P
Sbjct: 144 KSDKLSRAIDGSLYSPGIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPP 203
Query: 233 ------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW
Sbjct: 204 GDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWF 263
Query: 287 LNTLHSDLRNTKK-NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
LN LH L TKK ++SI+Y+ F G + + ++IP + D++ ++
Sbjct: 264 LNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIPPLEL---DESQRSELLHTVEYGETV 320
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
TE+ PFL L DLPPPPLFKD +NIIPQ+
Sbjct: 321 TES---PFLYLTCDLPPPPLFKDQFTENIIPQV 350
>gi|307214210|gb|EFN89316.1| U4/U6.U5 tri-snRNP-associated protein 2 [Harpegnathos saltator]
Length = 509
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/338 (48%), Positives = 205/338 (60%), Gaps = 48/338 (14%)
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
D D+ A G+ E R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGK
Sbjct: 20 DSDNEAEKNGKHVTRTKSEAPRLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGK 79
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------- 192
Y+QGRG +HAYTHS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 80 YFQGRGSNTHAYTHSVADTHHVFLNLHTLKFYCLPDNYEIVDSSLDDIKYVLNPTFDKTQ 139
Query: 193 ------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
G+NNIK D+ NV +Q+L VTPLR+FFL NY H
Sbjct: 140 IAQLDKSDKQSRAIDGSMYSPGIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSH 199
Query: 229 CKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +PV+
Sbjct: 200 VKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPVD 259
Query: 282 FMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDD 339
F+SW LN LH L TKK ++SIIY+ F G + + ++IP + + ++ + +
Sbjct: 260 FLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRIYTRKIPPLELEESQRSELLHT---VE 316
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ TE+ PFL L DLPPPPLFKD +NIIPQ+
Sbjct: 317 YGETVTES---PFLYLTCDLPPPPLFKDQFTENIIPQV 351
>gi|340713360|ref|XP_003395212.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Bombus
terrestris]
Length = 502
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/320 (49%), Positives = 198/320 (61%), Gaps = 48/320 (15%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
E R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+
Sbjct: 37 EAPRLCPYLDTINRQFLDFDFEKLCSVSLSKINVYACLVCGKYFQGRGTNTHAYTHSVAE 96
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 97 SHHVFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIAQLDKSDKLSRAIDGSL 156
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P LV RFG+
Sbjct: 157 YSPGIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGE 216
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
L RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW LN LH L TKK
Sbjct: 217 LMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKK 276
Query: 300 -NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
++SI+Y+ F G + + ++IP + D++ ++ TE+ PFL L
Sbjct: 277 RDSSIVYKTFLGHMRIYTRKIPPLEL---DESQRSELLHTVEYGETVTES---PFLYLTC 330
Query: 358 DLPPPPLFKDVMEKNIIPQL 377
DLPPPPLFKD +NIIPQ+
Sbjct: 331 DLPPPPLFKDQFTENIIPQV 350
>gi|322783229|gb|EFZ10815.1| hypothetical protein SINV_09876 [Solenopsis invicta]
Length = 539
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 169/372 (45%), Positives = 220/372 (59%), Gaps = 59/372 (15%)
Query: 48 DDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPY 107
DDD+ RG+ + + TG D D + ++D G+ ++R E R CPY
Sbjct: 27 DDDKMAASDRRGNPLKRKFID--TGSDSDNETEKD--------GKHVKTR-AEAPRLCPY 75
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
LDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG + AYTHS+ HHV++NL
Sbjct: 76 LDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTLAYTHSVAESHHVFLNL 135
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV---------------------------------GL 194
T K YCLPD YEI D SL+DI++V G+
Sbjct: 136 HTLKFYCLPDNYEIVDSSLDDIKYVLNPTFDKMQIALLDKSDKQSRAIDGSMYSPGIVGM 195
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHA 247
NNIK D+ NV +Q+L VTPLR+FFL NY H + P LV RFG+L RK+W+
Sbjct: 196 NNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVRRPPGDSSYLLVQRFGELMRKLWNP 255
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYE 306
RNFK VSPHE LQAV+ SKKRF+ Q +PV+F+SW LN LH L TKK ++SIIY+
Sbjct: 256 RNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYK 315
Query: 307 CFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
F G + + ++IP + + ++ + ++ TE+ PFL L DLPPPPLF
Sbjct: 316 TFLGHMRIYTRKIPPLELEESQRSELLNT---VEYGETVTES---PFLYLTCDLPPPPLF 369
Query: 366 KDVMEKNIIPQL 377
KD +NIIPQ+
Sbjct: 370 KDQFTENIIPQV 381
>gi|307184634|gb|EFN70965.1| U4/U6.U5 tri-snRNP-associated protein 2 [Camponotus floridanus]
Length = 504
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/352 (46%), Positives = 211/352 (59%), Gaps = 49/352 (13%)
Query: 68 NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVS 127
+G G+ D D D+ + +++ E R CPYLDT+NRQ LDFDFEK CSVS
Sbjct: 3 SGPQGKRKLVDIGSDSDNETEKNAKHAKTK-SETPRLCPYLDTINRQFLDFDFEKLCSVS 61
Query: 128 LSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLE 187
LS +NVYACLVCGKY+QGRG +HAYTHS+ HHV++NL T K YCLPD YEI D SL+
Sbjct: 62 LSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIVDSSLD 121
Query: 188 DIRHV---------------------------------GLNNIKETDFVNVTIQSLMRVT 214
DI++V GLNNIK D+ NV +Q+L VT
Sbjct: 122 DIKYVLYPTFDKAQIAQLDKSDKQSRAIDGSMYSPGIVGLNNIKANDYCNVILQALSHVT 181
Query: 215 PLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKAS 267
PLR+FFL NY H + P LV RFG+L RK+W+ RNFK VSPHE LQAV+ S
Sbjct: 182 PLRDFFLRESNYSHVRRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLWS 241
Query: 268 KKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEV-VKEIPKNTISG 325
KKRF+ Q +PV+F+SW LN LH L TKK ++SIIY+ F G + + ++IP +
Sbjct: 242 KKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRIYTRKIPPLELEE 301
Query: 326 NDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ ++ + ++ TE+ PFL L DLPPPPLFKD +NIIPQ+
Sbjct: 302 SQRSELLHT---VEYGETVTES---PFLYLTCDLPPPPLFKDQFTENIIPQV 347
>gi|332028251|gb|EGI68298.1| U4/U6.U5 tri-snRNP-associated protein 2 [Acromyrmex echinatior]
Length = 507
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/320 (49%), Positives = 199/320 (62%), Gaps = 48/320 (15%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
E R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+
Sbjct: 36 EAPRLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAE 95
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 96 SHHVFLNLHTLKFYCLPDNYEIVDSSLDDIKYVLNPTFDKMQIAQLDKSDKQSRAIDGSM 155
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
G+NNIK D+ NV +Q+L VTPLR+FFL NY H + P LV RFG+
Sbjct: 156 YSPGIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYAHVRRPPGDSSYLLVQRFGE 215
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
L RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +PV+F+SW LN LH L TKK
Sbjct: 216 LMRKLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKK 275
Query: 300 -NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
++SIIY+ F G + + ++IP + + ++ + ++ TE+ PFL L
Sbjct: 276 RDSSIIYKTFLGHMRIYTRKIPPLELEESQRSELLHT---VEYGETVTES---PFLYLTC 329
Query: 358 DLPPPPLFKDVMEKNIIPQL 377
DLPPPPLFKD +NIIPQ+
Sbjct: 330 DLPPPPLFKDQFTENIIPQV 349
>gi|449541552|gb|EMD32535.1| spindle pole body protein [Ceriporiopsis subvermispora B]
Length = 544
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 170/383 (44%), Positives = 224/383 (58%), Gaps = 62/383 (16%)
Query: 45 TYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDED-----------EDDLANGYGQG 93
T DDD + R D V + R E + +K + ED++A+ +
Sbjct: 6 TRDDDSDRPAKRARVDDQTIVSSSPRVEEKYEANKSKSILMDKNLDSLSEDEMAD---ET 62
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
Q S R YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+AY
Sbjct: 63 QESGPEPARASDLYLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGRSSYAY 122
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR----------------------- 190
HS+ HHV+INL T KVY LPDGY ++DPSLEDI
Sbjct: 123 AHSIHDDHHVFINLETTKVYVLPDGYAVSDPSLEDISFVLAPSFSQTQIQNLSKPAFALK 182
Query: 191 -------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRF 237
++GLNNIK DF+NV I SL+ VTPLR+ L+ +YR +S L+ RF
Sbjct: 183 PSYDLQSKPYIPGYIGLNNIKRNDFMNVVIHSLLHVTPLRDHLLL-SDYRGKESELLRRF 241
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
L +K+W+ R FK QVSPHEFLQ V++AS +F + Q +PVEF+SWLLN LH D+ +
Sbjct: 242 AGLAKKVWNPRLFKSQVSPHEFLQEVVRASAGKFSLEKQGDPVEFLSWLLNHLHKDMGGS 301
Query: 298 KK-NTSIIYECFQGE--LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
K+ N+SIIY FQG+ +E + + + I+GN++ D I + S PFL
Sbjct: 302 KRQNSSIIYSTFQGQVRMEAQQVLVRPDIAGNEKPR------FDIDREIKSTVS--PFLF 353
Query: 355 LGLDLPPPPLFKDVMEKNIIPQL 377
L +DLPPPPLF+D +EKNIIPQ+
Sbjct: 354 LAVDLPPPPLFQDSVEKNIIPQV 376
>gi|380021530|ref|XP_003694616.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Apis florea]
Length = 508
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 198/317 (62%), Gaps = 48/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 40 RLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHH 99
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SL+DI++V
Sbjct: 100 VFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIAQLDKSDKLSRAIDGSLYSP 159
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P LV RFG+L R
Sbjct: 160 GIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMR 219
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW LN LH L TKK ++
Sbjct: 220 KLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDS 279
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SI+Y+ F G + + ++IP + + ++ + ++ TE+ PFL L DLP
Sbjct: 280 SIVYKTFLGHMRIYTRKIPPLELEESQRSELLHT---VEYGETVTES---PFLYLTCDLP 333
Query: 361 PPPLFKDVMEKNIIPQL 377
PPPLFKD +NIIPQ+
Sbjct: 334 PPPLFKDQFTENIIPQV 350
>gi|383862535|ref|XP_003706739.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Megachile
rotundata]
Length = 508
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/317 (48%), Positives = 197/317 (62%), Gaps = 48/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 40 RLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHH 99
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SL+DI++V
Sbjct: 100 VFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIAQLDKSDKLSRAIDGSLYSP 159
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P LV RFG+L R
Sbjct: 160 GIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMR 219
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW +N LH L TKK ++
Sbjct: 220 KLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWFMNALHLALNGTKKRDS 279
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+Y+ F G + + ++IP + D++ ++ TE+ PFL L DLP
Sbjct: 280 TIVYKTFLGHMRIYTRKIPPLEL---DESQRSELLHTVEYGETVTES---PFLYLTCDLP 333
Query: 361 PPPLFKDVMEKNIIPQL 377
PPPLFKD +NIIPQ+
Sbjct: 334 PPPLFKDQFTENIIPQV 350
>gi|340370374|ref|XP_003383721.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Amphimedon
queenslandica]
Length = 469
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/322 (48%), Positives = 204/322 (63%), Gaps = 51/322 (15%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
+ R+CPYLDT+NR +LDFDFEK C+VSLSN NVYACLVCGKY+QGRGQ SHAY HS++
Sbjct: 6 LSRNCPYLDTINRSILDFDFEKLCTVSLSNNNVYACLVCGKYFQGRGQHSHAYIHSVQHY 65
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
H+V++NL+T + YCLPD YEI DPSLEDI+H+
Sbjct: 66 HYVFLNLKTLQFYCLPDNYEIIDPSLEDIKHICRPTFTSQEIESLDKSAKWMKALDETKY 125
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDL 240
GLNNIK D++NV + +L +TP R++FL +NY P LVHR G+L
Sbjct: 126 LPGILGLNNIKANDYMNVILHTLAHITPFRDYFLNEDNYLSITPPPGDQTFTLVHRLGEL 185
Query: 241 TRKIWHARNF--KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
RK+W+ R F + VSPHE LQAV SKKRF+I Q +PVEFMSWLLNTLH L K
Sbjct: 186 FRKLWNPRYFLFRAHVSPHEMLQAVSSVSKKRFKIVEQGDPVEFMSWLLNTLHFALSAGK 245
Query: 299 K--NTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
+ +SI+Y+ FQGE+++ +++P T +N ++ D + E + PFL L
Sbjct: 246 RKNKSSIVYDTFQGEMKIYTRKLPPQT-----ENEDEMMDYLKMEEYKQKEET-TPFLYL 299
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
LDLP PPLF+D +EKNIIPQ+
Sbjct: 300 ALDLPAPPLFQDELEKNIIPQI 321
>gi|328782425|ref|XP_394503.4| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Apis
mellifera]
Length = 508
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 198/317 (62%), Gaps = 48/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 40 RLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHH 99
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SL+DI++V
Sbjct: 100 VFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFDKAQIGQLDKSDKLSRAIDGSLYSP 159
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
G+NNIK D+ NV +Q+L VTPLR+FFL NY H K P LV RFG+L R
Sbjct: 160 GIVGMNNIKANDYCNVILQALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMR 219
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P++F+SW LN LH L TKK ++
Sbjct: 220 KLWNPRNFKAHVSPHEMLQAVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDS 279
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SI+Y+ F G + + ++IP + + ++ + ++ TE+ PFL L DLP
Sbjct: 280 SIVYKTFLGHMRIYTRKIPPLELEESQRSELLHT---VEYGETVTES---PFLYLTCDLP 333
Query: 361 PPPLFKDVMEKNIIPQL 377
PPPLFKD +NIIPQ+
Sbjct: 334 PPPLFKDQFTENIIPQV 350
>gi|345489070|ref|XP_001603642.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Nasonia
vitripennis]
Length = 496
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/342 (47%), Positives = 208/342 (60%), Gaps = 56/342 (16%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
D DEDE YG+ QR+ R CPYLDT+NRQ LDFDFEK CSVSLS +NVYACL
Sbjct: 16 DNDEDE-----PYGKEQRAV---APRLCPYLDTINRQFLDFDFEKLCSVSLSRINVYACL 67
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----- 192
VCGKY+QGRG +HAYTHS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 68 VCGKYFQGRGNNTHAYTHSVAEYHHVFLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTF 127
Query: 193 ----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
G+NNIK D+ NV +Q+L VTPLR++FL
Sbjct: 128 DKHQIAQLDRNDKLSRAIDGSMYSPGIVGMNNIKANDYCNVILQALSHVTPLRDYFLRES 187
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
NY K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK+F+ Q
Sbjct: 188 NYSKVKRPPGDSSYQLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLWSKKKFQFTEQG 247
Query: 278 NPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSD 335
+PV+F+SW LN LH L T KK++SIIY+ F G + + ++IP + + ++ +
Sbjct: 248 DPVDFLSWFLNALHIALNGTKKKDSSIIYKTFLGHMRIYTRKIPPLELEESQRSELLNT- 306
Query: 336 GGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
++ TE+ PFL L DLPPPPLFKD +NIIPQ+
Sbjct: 307 --VEYGETVTES---PFLYLTCDLPPPPLFKDQHAENIIPQV 343
>gi|328703901|ref|XP_001946816.2| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like
[Acyrthosiphon pisum]
Length = 461
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/324 (48%), Positives = 200/324 (61%), Gaps = 48/324 (14%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
+V R CPYLDT+NRQVLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+
Sbjct: 3 KVHRLCPYLDTINRQVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAE 62
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
HHV++NL+T K YCLPD YEI D SL+DI++V
Sbjct: 63 SHHVFLNLQTLKFYCLPDNYEIVDSSLDDIKYVLNPTFTPKHVGQLDTCDKRSRAIDGTL 122
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
GLNNIK D+ NV +Q+L VTPLR++FL NY K P LV RFG+
Sbjct: 123 YLPGIVGLNNIKANDYCNVILQALSNVTPLRDYFLDERNYAKVKRPPGDSVFLLVQRFGE 182
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK- 298
L RK+W+ RNFK VSPHE LQAV+ S K+F+ Q +P++F+SW LN+LH L K
Sbjct: 183 LMRKLWNPRNFKAHVSPHEMLQAVVLWSGKKFQFTEQGDPIDFLSWFLNSLHRALNGKKS 242
Query: 299 KNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
+++SI+Y+ F G + V ++IP + + + +D +H S PFL L
Sbjct: 243 RHSSIVYKTFMGSMRVKTRKIPPVELDEKQRYSLLCTDEYAEH------VSESPFLYLTC 296
Query: 358 DLPPPPLFKDVMEKNIIPQLQRLS 381
DLPPPPLFKD + +NIIPQ+ S
Sbjct: 297 DLPPPPLFKDEVMENIIPQVSLYS 320
>gi|321473066|gb|EFX84034.1| hypothetical protein DAPPUDRAFT_187802 [Daphnia pulex]
Length = 495
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/351 (47%), Positives = 208/351 (59%), Gaps = 62/351 (17%)
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
ED D++++ + +SRL CPYLDT+NR VLDFDFEK CSVSL+ +NVYAC
Sbjct: 13 EDFDDEDEPVVKTREPIAKSRL------CPYLDTINRTVLDFDFEKLCSVSLTRINVYAC 66
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---- 192
LVCGKY+QGRG +HAY HS+ GHHV++NL T + YCLPD YEI D SL+DI++V
Sbjct: 67 LVCGKYFQGRGPSTHAYLHSVGEGHHVFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPT 126
Query: 193 -----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
GLNNIK D+ NV +Q+L V PLR++FL
Sbjct: 127 FKKANIAVLDVIDKVSRSCDGTLYRPGVFGLNNIKANDYCNVVLQALSHVVPLRDYFLRE 186
Query: 224 ENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
ENY K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK+F+I Q
Sbjct: 187 ENYIGIKRPPGDNNVILVQRFGELIRKLWNPRNFKAHVSPHEMLQAVVLCSKKKFQITSQ 246
Query: 277 SNPVEFMSWLLNTLHSDLRNTKKNT-SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGS 334
+PVEF+SW LN LH L TKK T SIIY+ F G +++ + IP I D TEK
Sbjct: 247 GDPVEFLSWFLNALHLALNGTKKPTSSIIYKSFLGAMKIHSQRIPP--IDATD--TEK-- 300
Query: 335 DGGDDHDNITTETSRM----PFLMLGLDLPPPPLFKDVMEKNIIPQLQRLS 381
D +T E PFL L DLPPPPLFKD +NIIPQ+ +
Sbjct: 301 ----DALMLTAEYVETFVDSPFLFLAADLPPPPLFKDEFRENIIPQVSLFA 347
>gi|384497015|gb|EIE87506.1| hypothetical protein RO3G_12217 [Rhizopus delemar RA 99-880]
Length = 391
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 162/329 (49%), Positives = 210/329 (63%), Gaps = 52/329 (15%)
Query: 92 QGQRSRL----VEVRRDCP----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYY 143
Q +R+RL V++D YLDT++R +LDFDFEK CSVSLS+LNVYACL CGKYY
Sbjct: 5 QAKRARLNSPTKNVKKDKETTDLYLDTIDRHMLDFDFEKVCSVSLSHLNVYACLTCGKYY 64
Query: 144 QGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------- 192
QGRG+ SHAY HS++ HHV+INL T KVY LPDGYE++DPSL DI++V
Sbjct: 65 QGRGKSSHAYFHSIDKDHHVFINLSTLKVYVLPDGYEVDDPSLNDIKYVLNPILTKKQVE 124
Query: 193 ----------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK 230
GLNNIK D+VNV IQ+L + P+R++F++ +
Sbjct: 125 ELDKTLKTSYDLNNKKYFPGFVGLNNIKANDYVNVIIQALAHIPPIRDYFILQDFEAKGS 184
Query: 231 SPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
S LV RF L RKIW+ R FKGQVSPHE +Q + AS+KRF++ QSN ++F+SW LNTL
Sbjct: 185 SQLVCRFSALVRKIWNPRAFKGQVSPHELVQEISNASRKRFKLTEQSNAIDFLSWFLNTL 244
Query: 291 HSDLRNT-KKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG-DDHDNITTETS 348
H DL T KKN+SIIY+ FQGE++V + P TEK + + + ITT TS
Sbjct: 245 HKDLGGTKKKNSSIIYQYFQGEVKVESQEP-------GLPTEKDALAKFNPNRAITTTTS 297
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
PFL L LDLPP PL++D E++I+PQ+
Sbjct: 298 --PFLFLALDLPPVPLYQDERERDIVPQV 324
>gi|196011076|ref|XP_002115402.1| hypothetical protein TRIADDRAFT_59295 [Trichoplax adhaerens]
gi|190582173|gb|EDV22247.1| hypothetical protein TRIADDRAFT_59295 [Trichoplax adhaerens]
Length = 527
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/321 (49%), Positives = 197/321 (61%), Gaps = 50/321 (15%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
E R+CPYLDT+NR VLDFDFEK CS+SLSN NVYACLVCGKY+QGRG SHAYTHS++
Sbjct: 26 ERSRNCPYLDTINRSVLDFDFEKLCSISLSNQNVYACLVCGKYFQGRGSHSHAYTHSVQC 85
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
HHV+INL + K YCLPD YEI D SL+DI++V
Sbjct: 86 FHHVFINLHSLKFYCLPDDYEIIDSSLDDIKYVLDPTFSNEQIEVIDKIAKLSRTLEGKT 145
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGD 239
GLNNIK D+ NV +Q+L V PLRN+FL NY++ K P LV RFG+
Sbjct: 146 YLPGMVGLNNIKANDYCNVILQALAHVVPLRNYFLQENNYKNTKRPPGDTSFRLVQRFGE 205
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
L RKIW+ NFK +SPHE LQAV+ SKK+F+I Q +P+ F+SW+LN LH L TKK
Sbjct: 206 LIRKIWNPSNFKTHISPHEMLQAVVYCSKKQFQITEQGDPITFLSWMLNHLHMSLNGTKK 265
Query: 300 -NTSIIYECFQGELEVVKE--IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLG 356
+SIIY+ F G++ + K IP+ T E + D S PFL L
Sbjct: 266 MRSSIIYKTFCGQMRIYKRKVIPEET-------PELQKLELMELDEYKETQSVAPFLYLT 318
Query: 357 LDLPPPPLFKDVMEKNIIPQL 377
LDLPP PL++D + +NIIPQ+
Sbjct: 319 LDLPPAPLYQDELNENIIPQV 339
>gi|121583691|ref|NP_001073539.1| U4/U6.U5 tri-snRNP-associated protein 2 [Danio rerio]
gi|118763915|gb|AAI28869.1| Ubiquitin specific peptidase 39 [Danio rerio]
Length = 497
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 159/330 (48%), Positives = 199/330 (60%), Gaps = 53/330 (16%)
Query: 89 GYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQ 148
GY + +RSR CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRGQ
Sbjct: 26 GYVEDRRSR------HCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGQ 79
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------- 192
KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 80 KSHAYIHSVQVAHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHISGLDKQ 139
Query: 193 -----------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP--- 232
GLNNIK D+ NV +Q+L V PLRN+FL ENYR + P
Sbjct: 140 GKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLRNYFLEEENYRGIRRPPGD 199
Query: 233 ----LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN
Sbjct: 200 IMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDAVDFLSWFLN 259
Query: 289 TLHSDLRNTKKNTSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTET 347
LH L TKK +SII + FQG + + K++P + ++ + + E
Sbjct: 260 ALHGALGGTKKKSSIITKAFQGSMRIFSKKLPHPDLPPEEKEALLLKEEYQE------EM 313
Query: 348 SRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
S FL L LDLP PL+KD E+ IIPQ+
Sbjct: 314 SESTFLYLTLDLPTAPLYKDEKEQLIIPQV 343
>gi|242017490|ref|XP_002429221.1| U4/U6.U5 tri-snRNP-associated protein, putative [Pediculus humanus
corporis]
gi|212514110|gb|EEB16483.1| U4/U6.U5 tri-snRNP-associated protein, putative [Pediculus humanus
corporis]
Length = 482
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 198/317 (62%), Gaps = 48/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NRQVLDFDFEK CSVSLS +NVYACLVCGKY+QGRG + AYTHS+ GHH
Sbjct: 22 RLCPYLDTINRQVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTLAYTHSVSDGHH 81
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
VY+NL T K YCLPD YEI D SL+DI++
Sbjct: 82 VYLNLHTLKFYCLPDNYEIIDSSLDDIKYVLNPTFTSEHINSLDKTDKLSRAIDGTLYLP 141
Query: 192 --VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
VGLNNIK D+ NV +Q+L V+PLRN+FL NY K P LV RFG+L R
Sbjct: 142 GIVGLNNIKANDYCNVVLQALSHVSPLRNYFLREVNYSKVKRPPGDSSFLLVQRFGELLR 201
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQAV+ S+K+F+ Q +P++F+SW +N+LH L TKK ++
Sbjct: 202 KLWNPRNFKAHVSPHEMLQAVVLWSRKKFQFTEQGDPIDFLSWFINSLHIALNGTKKPDS 261
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SIIY+ F G + + ++IP + + + D++ TE+ PFL L DLP
Sbjct: 262 SIIYKSFLGSMRIYTRKIPPTEL---EDKQKVALLLTDEYQEKITES---PFLYLTCDLP 315
Query: 361 PPPLFKDVMEKNIIPQL 377
PPPLFKD +NIIPQ+
Sbjct: 316 PPPLFKDEFMENIIPQV 332
>gi|432873973|ref|XP_004072409.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Oryzias
latipes]
Length = 488
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/327 (47%), Positives = 199/327 (60%), Gaps = 49/327 (14%)
Query: 94 QRSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
+R R+VE RR CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRGQKSH
Sbjct: 25 RRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGQKSH 84
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------------------- 191
AYTHS++ HHV++NL T K YCLPD YEI D SLEDI +
Sbjct: 85 AYTHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIEGLDKHGKL 144
Query: 192 -------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------ 232
VGLNNIK D+ N +Q+ V PLRN+FL ENYR + P
Sbjct: 145 YRAYDGTTYLPGIVGLNNIKANDYANAVLQAFSNVPPLRNYFLEEENYRDIRRPPGDIMF 204
Query: 233 -LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+FM+W LN +H
Sbjct: 205 LLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDAVDFMTWFLNAMH 264
Query: 292 SDLRNTKKNTSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L TKK SI+ + FQG + + K++P + ++ ++ + + S
Sbjct: 265 GALGGTKKKPSILTKVFQGSMRIFSKKLPHPDLPPEEKEALLVTEEYQE------QMSES 318
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQL 377
FL L LDLP PL+KD E+ IIPQ+
Sbjct: 319 TFLFLTLDLPTAPLYKDEKEQLIIPQV 345
>gi|427783021|gb|JAA56962.1| Putative spindle pole body protein [Rhipicephalus pulchellus]
Length = 496
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/345 (46%), Positives = 206/345 (59%), Gaps = 52/345 (15%)
Query: 76 DEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYA 135
D K + +L G + SR + RR+CPYLDT+NR VLDFDFEK CSVSLS +NVYA
Sbjct: 6 DAKKRKLSVELKRGVSTVEHSR--QSRRNCPYLDTINRNVLDFDFEKLCSVSLSRINVYA 63
Query: 136 CLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--- 192
CLVCGKY+QGRG +HAYTHS++ HHV++NL+T + YCLPD YEI D SL+DI +V
Sbjct: 64 CLVCGKYFQGRGTNTHAYTHSVQVSHHVFLNLQTLRFYCLPDNYEIVDSSLDDITYVLRP 123
Query: 193 ------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLI 222
GLNNIK D+ NV +Q+L V PLRN+FL
Sbjct: 124 TFTKEDIVRLDTSDRLSRAYDGTTYLPGIVGLNNIKANDYCNVILQALSHVPPLRNYFLR 183
Query: 223 PENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
ENY K P +V RFG+L RK+W+ RNFK VSPHE LQAV+ SKKRF+I
Sbjct: 184 EENYTTLKRPPGDINFLIVQRFGELIRKLWNPRNFKAHVSPHEMLQAVVLCSKKRFQITQ 243
Query: 276 QSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEVV--KEIPKNTISGNDQNTEK 332
Q +P++F+SW LN+LH L T+K ++SI+Y F+G + V K IP + +
Sbjct: 244 QGDPIDFLSWFLNSLHMALNGTQKISSSIVYRTFRGGMNVYSRKVIPVEMTEAERRAALR 303
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ ++D T F+ L DLP PLFKD + +NIIPQ+
Sbjct: 304 TT----EYDEKVESTG---FMYLTADLPAQPLFKDELRENIIPQV 341
>gi|348528502|ref|XP_003451756.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Oreochromis
niloticus]
Length = 501
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/326 (48%), Positives = 196/326 (60%), Gaps = 49/326 (15%)
Query: 95 RSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHA 152
R VE RR CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRG KSHA
Sbjct: 28 RGHAVEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGLKSHA 87
Query: 153 YTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--------------------- 191
YTHS++ HHV++NL T K YCLPD YEI D SLEDI +
Sbjct: 88 YTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIAGLDKQGKLY 147
Query: 192 ------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------- 232
VGLNNIK D+ NV +Q+ V PLRN+FL ENYR + P
Sbjct: 148 RAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNVPPLRNYFLEEENYRGIRRPPGDIMFL 207
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+FM+W LN LH
Sbjct: 208 LVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDAVDFMTWFLNALHG 267
Query: 293 DLRNTKKNTSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
L TKK SII + FQG + + K++P + ++ +D + + S
Sbjct: 268 ALGGTKKKPSIITKAFQGYMRIFSKKLPHPDLPPEEKEALLTTDEYQE------QMSESS 321
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQL 377
FL L LDLP PL+KD E+ IIPQ+
Sbjct: 322 FLFLTLDLPTAPLYKDEKEQLIIPQV 347
>gi|357619622|gb|EHJ72117.1| putative ubiquitin specific protease 39 and snrnp assembly factor
[Danaus plexippus]
Length = 485
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/318 (49%), Positives = 198/318 (62%), Gaps = 55/318 (17%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT+NR VLDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+ GHHV+
Sbjct: 33 CPYLDTINRHVLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVAEGHHVF 92
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------------- 192
+NL T K YCLPD YE+ D SL DI++V
Sbjct: 93 LNLHTLKFYCLPDNYEVIDSSLNDIKYVLNPIFTPDQIKQLDQNIKMSRAIDGTMYMPGI 152
Query: 193 -GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
GLNNIK D+ NV +Q L +V PLRN+FL ENY K P LV RFG+L RK+
Sbjct: 153 VGLNNIKANDYCNVILQCLAQVRPLRNYFLREENYADVKRPPGDSSFLLVQRFGELLRKL 212
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSI 303
W+ R FK VSPHE LQAV+ SKKRF+ QS+P++F+SW LN+LH L TKK N+SI
Sbjct: 213 WNPRAFKAHVSPHEMLQAVVLWSKKRFQFIKQSDPIDFLSWFLNSLHMALNGTKKPNSSI 272
Query: 304 IYECFQGELEV-VKEIP---KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
IY+ F G + + +++P + + D N+E +++ + TE+ PFL L DL
Sbjct: 273 IYKSFLGHMRIYTRKLPPPDADEAANVDLNSE-------EYNEMITES---PFLYLTCDL 322
Query: 360 PPPPLFKDVMEKNIIPQL 377
PP PLF D +NIIPQ+
Sbjct: 323 PPTPLFTDEFRENIIPQV 340
>gi|336389959|gb|EGO31102.1| hypothetical protein SERLADRAFT_444682 [Serpula lacrymans var.
lacrymans S7.9]
Length = 543
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 167/372 (44%), Positives = 219/372 (58%), Gaps = 69/372 (18%)
Query: 63 AKVGQNGR--------TGEDDDEDK-----------DEDEDDLANGYGQGQRSRLVEVRR 103
KVG++GR T DD+ + ++D DD GY Q + E +
Sbjct: 21 VKVGEDGRFNGTSSTQTAPPDDQLEGGMEKNMQTFVEDDYDDEIEGYEQSKN----EPKA 76
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
YLDT+NR +LDFDFEK CSVSLSN+N Y CLVCGKY+QGRG+KS+AY HS+ HHV
Sbjct: 77 SDLYLDTINRALLDFDFEKVCSVSLSNINTYGCLVCGKYFQGRGRKSYAYAHSIHDDHHV 136
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIR--------------------------------- 190
+INL T KV+ LPDGY ++DPSLEDI
Sbjct: 137 FINLETTKVHVLPDGYPVSDPSLEDISFVLAPSFTRSSISSLSSSSHLLKPSYDLSSKPY 196
Query: 191 ---HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA 247
++GLNNIK D +NV I SL+ + PLR++ L+ N+R +S LV RF L +K+W+
Sbjct: 197 LPGYIGLNNIKRNDHMNVIIHSLLHIPPLRDYLLL-SNFRGKESELVKRFATLAKKVWNP 255
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYE 306
R FK QVSPHEFLQ V +AS +FR+ Q +PVEF+ WLLN LH D T KKN+S+I+
Sbjct: 256 RLFKSQVSPHEFLQEVNRASTGKFRLEQQGDPVEFLGWLLNRLHKDTGGTKKKNSSVIFS 315
Query: 307 CFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
FQGEL V +++ +G +N + D D + T+ PFL L +DLPPPPLF
Sbjct: 316 TFQGELRVETQQVLVRPDAG--ENEKPRFDIARDSKSTTS-----PFLFLAVDLPPPPLF 368
Query: 366 KDVMEKNIIPQL 377
+D +EKNIIPQ+
Sbjct: 369 QDSVEKNIIPQV 380
>gi|410923080|ref|XP_003975010.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Takifugu
rubripes]
Length = 500
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/327 (47%), Positives = 199/327 (60%), Gaps = 49/327 (14%)
Query: 94 QRSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
+R R+VE +R CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRG KSH
Sbjct: 27 RRGRVVEDKRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGLKSH 86
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------------------- 191
AYTHS++ HHV++NL T K YCLPD YEI D SLEDI +
Sbjct: 87 AYTHSVQFTHHVFLNLNTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIAGLDKQGKL 146
Query: 192 -------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------ 232
VGLNNIK D+ NV +Q+ V PLRNFFL ENY+ + P
Sbjct: 147 YRAYDGTTYLPGIVGLNNIKANDYANVVLQAFCNVPPLRNFFLEEENYKGIRRPPGDIMF 206
Query: 233 -LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+FM+W LN LH
Sbjct: 207 LLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDAVDFMTWFLNALH 266
Query: 292 SDLRNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L TKK SI+ + FQG + + K++P + ++ ++ + + S
Sbjct: 267 GALGGTKKKPSILTKVFQGSMRIFTKKLPHPDLMPEEKEALLVTEEYQE------QMSES 320
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQL 377
FL L LDLP PL+KD E+ IIPQ+
Sbjct: 321 TFLFLTLDLPTAPLYKDEKEQLIIPQV 347
>gi|156395358|ref|XP_001637078.1| predicted protein [Nematostella vectensis]
gi|156224187|gb|EDO45015.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 204/319 (63%), Gaps = 49/319 (15%)
Query: 103 RDCPYLDTVN--RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
R CPY+ R VLDFDFEK CS+SLS++NVYACL+CGKY+QGRG+ S+AYTHS++ G
Sbjct: 12 RHCPYITLFPFPRHVLDFDFEKLCSISLSHINVYACLICGKYFQGRGRHSYAYTHSVQFG 71
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
HHVY+NL T K YCLPD YE+ D SL+DI++V
Sbjct: 72 HHVYLNLHTLKFYCLPDNYEVIDSSLDDIKYVLNPTFTKKYIKEMDESARLSRAFDGATY 131
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDL 240
GLNNIK D++NV +Q+ +TP+RN+FL ENY K P LV R+G+L
Sbjct: 132 LPGIVGLNNIKANDYLNVVLQAFAFITPIRNYFLREENYNVIKRPPGDIMFQLVQRYGEL 191
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK- 299
RK+W+ RNFK VSPHE LQAV+ SKKRF+ Q +P+EF+ W LN LH+ L TKK
Sbjct: 192 LRKLWNPRNFKAHVSPHEMLQAVVLCSKKRFQFTKQGDPIEFLPWFLNALHTALNGTKKM 251
Query: 300 NTSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD 358
++SII++ FQG++ + +++P+ + N++ E+ +++ +E+ PFL+L LD
Sbjct: 252 SSSIIFKSFQGKMRIYSRKVPQTEVQCNEEKAEQMK--LEEYQETVSES---PFLVLALD 306
Query: 359 LPPPPLFKDVMEKNIIPQL 377
+P PLFKD ++NIIPQ+
Sbjct: 307 IPASPLFKDEFQQNIIPQV 325
>gi|428184928|gb|EKX53782.1| hypothetical protein GUITHDRAFT_100752 [Guillardia theta CCMP2712]
Length = 571
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 201/317 (63%), Gaps = 39/317 (12%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
+R CPYLD++NR +LDFDFEK CS+S S+LNVY CLVCGKY+QGR + S Y HSLE H
Sbjct: 79 QRFCPYLDSINRHILDFDFEKVCSISNSHLNVYVCLVCGKYFQGRARGSPVYFHSLEHNH 138
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
HV++ L + +VYC+PD YE+ D SL DI+H
Sbjct: 139 HVFMKLESGRVYCIPDNYEVLDSSLADIKHNLNPTYTSEHVKSLDIDVKYSRGIDGTEFI 198
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHAR 248
VGLNN+K T ++NV IQ+L VT LRNFFL+PENY+H KSPLV RFG+L RK+W+
Sbjct: 199 PGTVGLNNLKNTAYLNVIIQALSCVTELRNFFLLPENYKHFKSPLVQRFGELLRKMWNPS 258
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYEC 307
FKGQVSPHE QA+ S +++R V S+P EF++W LN+LH L + K+N+S+I++
Sbjct: 259 AFKGQVSPHELFQAISVESNRKYRSDVHSDPAEFLNWFLNSLHRGLGGSNKRNSSVIHKV 318
Query: 308 FQGEL---EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
FQG + EV E K I D+N D DD + +T+ PFL L LDLPP PL
Sbjct: 319 FQGLVRFQEVRVESKKAKIKKADENERMVMDDMDDDEPWDVQTT--PFLQLTLDLPPTPL 376
Query: 365 FKDVMEKNIIPQLQRLS 381
+ D +KNIIPQ+ L+
Sbjct: 377 YADERDKNIIPQVPLLT 393
>gi|336376913|gb|EGO05248.1| hypothetical protein SERLA73DRAFT_100998 [Serpula lacrymans var.
lacrymans S7.3]
Length = 496
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/336 (47%), Positives = 207/336 (61%), Gaps = 50/336 (14%)
Query: 80 DEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 139
++D DD GY Q + E + YLDT+NR +LDFDFEK CSVSLSN+N Y CLVC
Sbjct: 10 EDDYDDEIEGYEQSKN----EPKASDLYLDTINRALLDFDFEKVCSVSLSNINTYGCLVC 65
Query: 140 GKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR--------- 190
GKY+QGRG+KS+AY HS+ HHV+INL T KV+ LPDGY ++DPSLEDI
Sbjct: 66 GKYFQGRGRKSYAYAHSIHDDHHVFINLETTKVHVLPDGYPVSDPSLEDISFVLAPSFTR 125
Query: 191 ---------------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
++GLNNIK D +NV I SL+ + PLR++ L+
Sbjct: 126 SSISSLSSSSHLLKPSYDLSSKPYLPGYIGLNNIKRNDHMNVIIHSLLHIPPLRDYLLL- 184
Query: 224 ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
N+R +S LV RF L +K+W+ R FK QVSPHEFLQ V +AS +FR+ Q +PVEF+
Sbjct: 185 SNFRGKESELVKRFATLAKKVWNPRLFKSQVSPHEFLQEVNRASTGKFRLEQQGDPVEFL 244
Query: 284 SWLLNTLHSDLRNT-KKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHD 341
WLLN LH D T KKN+S+I+ FQGEL V +++ +G +N + D D
Sbjct: 245 GWLLNRLHKDTGGTKKKNSSVIFSTFQGELRVETQQVLVRPDAG--ENEKPRFDIARDSK 302
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ T+ PFL L +DLPPPPLF+D +EKNIIPQ+
Sbjct: 303 STTS-----PFLFLAVDLPPPPLFQDSVEKNIIPQV 333
>gi|347841544|emb|CCD56116.1| similar to U4/U6.U5 tri-snRNP-associated protein [Botryotinia
fuckeliana]
Length = 553
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 209/347 (60%), Gaps = 65/347 (18%)
Query: 81 EDEDDLANGYG----QGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLS 129
EDE+DL NG + + + V R P YLDT+NR VLDFDFEK CS+SLS
Sbjct: 59 EDEEDLKNGMEDLEVEDEDLQFVVPREKAPMEGYDDLYLDTINRNVLDFDFEKLCSISLS 118
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
N+NVYACLVCGKYYQGRG KSHAY H+LE GHHV+IN++T+KVY LP+GYE+ + SL+DI
Sbjct: 119 NINVYACLVCGKYYQGRGTKSHAYFHALEVGHHVFINMQTQKVYVLPEGYEVKNKSLDDI 178
Query: 190 R---------------------------------HVGLNNIKETDFVNVTIQSLMRVTPL 216
+ VG+NNIK+ D+ NV IQ+L V PL
Sbjct: 179 KFVSDPTYTKEQVMAMDREAKTSWTLSGKEYIPGFVGMNNIKDNDYFNVVIQALSHVPPL 238
Query: 217 RNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
RNFFL+ E++ H + L+ R L RKIW+ R FK VSPHE LQ + S K+F + Q
Sbjct: 239 RNFFLL-EDF-HNRPELIKRVSILFRKIWNPRAFKSHVSPHELLQEISLKSNKKFNLTTQ 296
Query: 277 SNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
S+PV+F+SW LN LH L TK +SII + FQG+L+V Q +
Sbjct: 297 SDPVDFLSWFLNNLHLALGGSKTKPGSSIIQKIFQGKLKV-----------ESQAITAKA 345
Query: 335 DGGD----DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
D GD + ++ T+ SR F++L LDLPP PLF+D +E+NIIPQ+
Sbjct: 346 DAGDRLRFEDADVKTDVSR--FMLLTLDLPPAPLFQDELERNIIPQI 390
>gi|326427425|gb|EGD72995.1| U4/U6.U5 tri-snRNP-associated protein 2 [Salpingoeca sp. ATCC
50818]
Length = 557
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 148/308 (48%), Positives = 192/308 (62%), Gaps = 38/308 (12%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CSV++SN NVYACLVCGKYYQGRG +HAYTHSLE GHH
Sbjct: 82 RRCPYLDTINRNMLDFDFEKLCSVTMSNQNVYACLVCGKYYQGRGPGTHAYTHSLEEGHH 141
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
V+INL T K YCLPD YE+ D +L+DI+
Sbjct: 142 VFINLHTLKFYCLPDNYEVIDSALDDIKFVLYPVYSKDYIAKMDEIGKYSRALDGTRYLP 201
Query: 192 --VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
VGLNNIK D+VNV +Q+L RV P RNFFL N R + LV GDL RK+ + +
Sbjct: 202 GVVGLNNIKANDYVNVVVQTLNRVAPFRNFFLDTTNTRRIRDRLVQTMGDLIRKVNNPKA 261
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FKG VSPHEFLQA+ +SKK+FRI QS+P+ +SWLLNTL D + +K ++I + F+
Sbjct: 262 FKGHVSPHEFLQAITTSSKKQFRITEQSDPIRLLSWLLNTL--DAKLSKHGHTVISDTFK 319
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++ V T + + +++ TTE + ++ LGLDLPP PLF D +
Sbjct: 320 GKMLVTSRKLPPTQDMQEVANIRIDPNAEEYKPKTTE---IEYMFLGLDLPPAPLFHDEL 376
Query: 370 EKNIIPQL 377
++N+IPQ+
Sbjct: 377 QQNVIPQV 384
>gi|299756400|ref|XP_001829307.2| ubiquitin C-terminal hydrolase Ubp10 [Coprinopsis cinerea
okayama7#130]
gi|298411659|gb|EAU92267.2| ubiquitin C-terminal hydrolase Ubp10 [Coprinopsis cinerea
okayama7#130]
Length = 560
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 167/373 (44%), Positives = 214/373 (57%), Gaps = 55/373 (14%)
Query: 50 DEEEEYGGRGDSGAKVGQNGRTGEDDDED--------KDEDEDDLANGYGQGQRSRLVEV 101
D + G GD+ + + R D +D + DEDD G + ++
Sbjct: 10 DIQSRESGEGDNAERPAKRARMDLDQPKDSKDRADSPQSSDEDDETLGQTLPPAT---DL 66
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
R YLDT+NRQ LDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+AY HS+ H
Sbjct: 67 RSSDLYLDTINRQALDFDFEKLCSVSLSNINIYGCLVCGKYFQGRGRNSYAYAHSIHEDH 126
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------------- 192
HV+INL T KVY LPDGY ++DPSLEDI V
Sbjct: 127 HVFINLETTKVYVLPDGYHVSDPSLEDISFVLAPKFTPESIKAISTGLYLTKPSYDLSHK 186
Query: 193 -------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIW 245
GLNNIK D +NV I +L+ V PLR+ L+ +Y+ + L+ RF L +K+W
Sbjct: 187 PYLQGFVGLNNIKRNDHMNVIIHALLHVPPLRDSLLL-SDYKGKEPELLKRFAGLAKKVW 245
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-TSII 304
+ R FK QVSPHEFLQ V +AS +FR+ Q +PVEF+ WLLN LH DL TKK +SII
Sbjct: 246 NPRLFKSQVSPHEFLQEVNRASGGKFRLEEQGDPVEFLGWLLNHLHKDLGGTKKKGSSII 305
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
++ FQGEL V E + + + EK D +I T S PFL L +DLPPPPL
Sbjct: 306 FKTFQGELRV--ETQQVVVRPDAGENEKPR--FDIDRDIKTTVS--PFLFLAVDLPPPPL 359
Query: 365 FKDVMEKNIIPQL 377
F+D +EKNIIPQ+
Sbjct: 360 FQDAVEKNIIPQV 372
>gi|194769538|ref|XP_001966861.1| GF19056 [Drosophila ananassae]
gi|190618382|gb|EDV33906.1| GF19056 [Drosophila ananassae]
Length = 494
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 199/318 (62%), Gaps = 49/318 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEIAKLDKVLPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL +NY H K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQNYAHIKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH ++ N + N
Sbjct: 216 RKMWNPRNFKAHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRAMKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + D ++ D++ + +T+ F+ L DL
Sbjct: 276 SSILYKIFLGEMQIYTRKIPPVEL---DDAAKQQLLATDEYKDQVEQTN---FIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQL 377
PPPPLF D +NIIPQ+
Sbjct: 330 PPPPLFTDEFRENIIPQV 347
>gi|346465657|gb|AEO32673.1| hypothetical protein [Amblyomma maculatum]
Length = 490
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 150/318 (47%), Positives = 194/318 (61%), Gaps = 50/318 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
++CPYLDT+NR VLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS++ HH
Sbjct: 18 QNCPYLDTINRNVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVQVSHH 77
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL+T + YCLPD YEI D SL+DI +V
Sbjct: 78 VFLNLQTLRFYCLPDNYEIVDSSLDDITYVLRPTFTKEDIVRLDTSDRLSRAYDGTTYLP 137
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ NV +Q+L V PLRN+FL ENY K P +V RFG+L R
Sbjct: 138 GIVGLNNIKANDYCNVILQALSHVPPLRNYFLREENYASLKRPPGDINSLIVQRFGELIR 197
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NT 301
K+W+ RNFK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN+LH L T+ N+
Sbjct: 198 KLWNPRNFKAHVSPHEMLQAVVLCSKKRFQITQQGDPIDFLSWFLNSLHMALNGTQSINS 257
Query: 302 SIIYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
SI+Y F+G + V K IP + + ++ + + R F+ L DL
Sbjct: 258 SIVYRTFRGGMNVYSRKVIPVEMTEAERRAALRTTEYDE-------KVERTGFMYLTADL 310
Query: 360 PPPPLFKDVMEKNIIPQL 377
P PLFKD + +NIIPQ+
Sbjct: 311 PAQPLFKDELRENIIPQV 328
>gi|358389617|gb|EHK27209.1| hypothetical protein TRIVIDRAFT_62978 [Trichoderma virens Gv29-8]
Length = 551
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 173/391 (44%), Positives = 224/391 (57%), Gaps = 62/391 (15%)
Query: 26 SSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDD 85
+SP+ R + PLAN++DD E+ G +NGR ED+D + +DEDD
Sbjct: 17 ASPASKRSRMGDLDSPLANSHDDAQSLEQDGD--------ARNGRP-EDEDSEGFDDEDD 67
Query: 86 LANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQG 145
A+ ++S + D YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QG
Sbjct: 68 EAHMTAPVRQSGPADGYDDL-YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQG 126
Query: 146 RGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------- 192
RG KSHAY HSL+ HHVYINL T+KVY LP+GYE+ SL+DI++V
Sbjct: 127 RGVKSHAYFHSLDEDHHVYINLETQKVYVLPEGYEVKSKSLDDIKYVSDPRYTKNEVIQL 186
Query: 193 ---------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS 231
G+NNIKE D++NV +Q+L V+PLRN+ L+ + + KS
Sbjct: 187 DRRVNHVSWTLDGKEYTPGFVGMNNIKENDYLNVVVQALSHVSPLRNYLLLEDFSK--KS 244
Query: 232 PLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
LV R L RKIW+ R FK VSPHE LQ + S KRF + QS+PVEF+SW LN LH
Sbjct: 245 ELVKRCSILFRKIWNPRAFKSHVSPHELLQEIALLSNKRFTLTNQSDPVEFLSWFLNNLH 304
Query: 292 SDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD---HDNITTE 346
L TK +S+I FQG+L+V Q +D GD + +
Sbjct: 305 LGLGGSKTKPGSSMIQRTFQGKLKV-----------ESQAITARADAGDRLRFEEAAEVK 353
Query: 347 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ FL L LDLP PLF+D +EKNIIPQ+
Sbjct: 354 VDIVRFLFLTLDLPSAPLFQDELEKNIIPQV 384
>gi|390605008|gb|EIN14399.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 514
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 154/308 (50%), Positives = 193/308 (62%), Gaps = 44/308 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR LDFDFEK CSVS SN+NVY CL+CGKYYQGRG+KS AY HS+ HHV+IN
Sbjct: 53 YLDTINRAALDFDFEKVCSVSTSNVNVYGCLICGKYYQGRGRKSPAYAHSIHEDHHVFIN 112
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
L T KVY LPDGY +NDPSLEDI V
Sbjct: 113 LETTKVYVLPDGYPVNDPSLEDIAFVLAPSFTTASLPQASSPLYTSKPSYDLSSKPYLPG 172
Query: 193 --GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
GLNNIK+ D +NV IQSL+ V PLR++ L+ + + L+ RF LT+K+W+ R F
Sbjct: 173 FIGLNNIKKHDHMNVVIQSLLHVPPLRDYLLL-SRFAGKEPELLKRFAALTKKLWNPRLF 231
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQ 309
K QVSPHEFLQ V +AS +FR+ Q +PV+F+SWLLN LH D +KK N+SII+ CFQ
Sbjct: 232 KSQVSPHEFLQEVGRASAGKFRLEKQGDPVDFLSWLLNQLHKDTGGSKKANSSIIFSCFQ 291
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G+L + E + + + EK D T+T+ PFL L +DLPPPPLF+D +
Sbjct: 292 GQLRM--ETQQIVVRPDAGLNEKPRFDIDRE----TKTTISPFLFLAVDLPPPPLFQDAV 345
Query: 370 EKNIIPQL 377
EKNIIPQ+
Sbjct: 346 EKNIIPQV 353
>gi|323451594|gb|EGB07471.1| hypothetical protein AURANDRAFT_71813 [Aureococcus anophagefferens]
Length = 1405
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 192/307 (62%), Gaps = 34/307 (11%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT+NR +LDFDFEK CS SL+N NVY+CLVCGK++QGRG+ +HAYTHS + GHH++
Sbjct: 34 CPYLDTINRHLLDFDFEKVCSQSLTNQNVYSCLVCGKFFQGRGRHTHAYTHSTQTGHHMF 93
Query: 165 INLRTEKVYCLPDGYEINDPSLEDI-----------------------RHV--------- 192
INL T ++YCLP+ YE+ D SL+D+ R V
Sbjct: 94 INLETCRIYCLPENYEVVDSSLDDVVRCLRPVFGPERIGALDGTTTLARDVHGVAYLPGF 153
Query: 193 -GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GLNN+K+TD+VNV + +L V PLR+FFL PENY HC +PLVH+FG+L RK+W NFK
Sbjct: 154 CGLNNLKKTDYVNVVVHALAHVAPLRDFFLRPENYAHCPAPLVHKFGELLRKLWSRDNFK 213
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQG 310
+SPHE +Q + ASK RF+IG S+ +F+ W LN LH L T K+ +S+I++ FQG
Sbjct: 214 SVISPHELVQEITVASKLRFQIGETSDAADFLVWFLNELHRSLGGTRKRGSSVIHDAFQG 273
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME 370
++ V + ++ D+ + + + +PFL L LD+P PLFKD
Sbjct: 274 DVRVETLSRRTHLTKRDEADVDDTAVSAEAQGWKRDERDLPFLYLTLDVPATPLFKDTQG 333
Query: 371 KNIIPQL 377
NI+PQ+
Sbjct: 334 GNIVPQI 340
>gi|409083639|gb|EKM83996.1| hypothetical protein AGABI1DRAFT_110600 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 502
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/309 (49%), Positives = 197/309 (63%), Gaps = 46/309 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+KS+AY HS+ HHV+IN
Sbjct: 55 YLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGKKSYAYAHSIHEDHHVFIN 114
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY + DPSLEDI
Sbjct: 115 LHTTKVYVLPDGYPVADPSLEDIAFVLAPNFTPNSISNLSSPMHLEKLSYDLQHQPYLSG 174
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLNNIK D +NV I +L+ V PLR++ L+ ++R+ ++ L+ RF L +KIW+ R F
Sbjct: 175 YIGLNNIKRNDHMNVVIHALLHVPPLRDYLLL-SDFRNKETELIKRFAALAKKIWNPRLF 233
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQ 309
K QVSPHEFLQ V +AS +FR+ Q +PVEF+ WLLN LH DL +KK N+SII+ FQ
Sbjct: 234 KSQVSPHEFLQEVNRASGGKFRLEQQGDPVEFLGWLLNRLHKDLGGSKKRNSSIIFSTFQ 293
Query: 310 GELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
GEL V +++ SG ++ D +I + +S PFL L +DLPPPPLF+D
Sbjct: 294 GELRVETQQVLVRPDSGENEKPRFDID-----RDIKSTSS--PFLFLAVDLPPPPLFQDS 346
Query: 369 MEKNIIPQL 377
EKNIIPQ+
Sbjct: 347 HEKNIIPQV 355
>gi|426201316|gb|EKV51239.1| spindle pole body protein [Agaricus bisporus var. bisporus H97]
Length = 502
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/309 (49%), Positives = 197/309 (63%), Gaps = 46/309 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+KS+AY HS+ HHV+IN
Sbjct: 55 YLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGKKSYAYAHSIHEDHHVFIN 114
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY + DPSLEDI
Sbjct: 115 LHTTKVYVLPDGYPVADPSLEDIAFVLAPNFTPNSISNLSSPMHLEKLSYDLQHQPYLSG 174
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLNNIK D +NV I +L+ V PLR++ L+ ++R+ ++ L+ RF L +KIW+ R F
Sbjct: 175 YIGLNNIKRNDHMNVVIHALLHVPPLRDYLLL-SDFRNKETELIKRFAALAKKIWNPRLF 233
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQ 309
K QVSPHEFLQ V +AS +FR+ Q +PVEF+ WLLN LH DL +KK N+SII+ FQ
Sbjct: 234 KSQVSPHEFLQEVNRASGGKFRLEQQGDPVEFLGWLLNRLHKDLGGSKKRNSSIIFSTFQ 293
Query: 310 GELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
GEL V +++ SG ++ D +I + +S PFL L +DLPPPPLF+D
Sbjct: 294 GELRVETQQVLVRPDSGENEKPRFDID-----RDIKSTSS--PFLFLAVDLPPPPLFQDS 346
Query: 369 MEKNIIPQL 377
EKNIIPQ+
Sbjct: 347 HEKNIIPQV 355
>gi|409051981|gb|EKM61457.1| hypothetical protein PHACADRAFT_156708 [Phanerochaete carnosa
HHB-10118-sp]
Length = 517
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/316 (47%), Positives = 198/316 (62%), Gaps = 48/316 (15%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
VR YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+AY H++
Sbjct: 54 VRASDLYLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGKSSYAYAHAIHDD 113
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------ 190
HHV+INL T KVY LPDGY ++DPSLEDI
Sbjct: 114 HHVFINLETAKVYVLPDGYPVSDPSLEDISFVLAPSFSKSSIANLSAPAHLLKPSYDLSS 173
Query: 191 ------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKI 244
++GLNNIK D++NV I SL+ V PLR++ L+ N++ +S ++ RF L +K+
Sbjct: 174 KPYIPGYIGLNNIKRNDYMNVIIHSLLHVPPLRDYLLL-SNFKGKESEMLRRFAGLAKKV 232
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSI 303
W+ R FK QVSPHE LQ V +AS +F + Q +P EF+ WLLN LH D+ TKK N+S+
Sbjct: 233 WNPRLFKSQVSPHELLQEVGRASVGKFSLEKQGDPAEFLGWLLNHLHKDMGGTKKRNSSV 292
Query: 304 IYECFQGEL--EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
++ FQGEL E + + ++ + GN++ D I T TS PFL L +DLPP
Sbjct: 293 MFSTFQGELRMETQQVVVRSDLRGNEKPR------FDIDREIRTTTS--PFLFLAVDLPP 344
Query: 362 PPLFKDVMEKNIIPQL 377
PPLF+D +EKNIIPQ+
Sbjct: 345 PPLFQDSVEKNIIPQV 360
>gi|195432803|ref|XP_002064406.1| GK20149 [Drosophila willistoni]
gi|194160491|gb|EDW75392.1| GK20149 [Drosophila willistoni]
Length = 489
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 198/318 (62%), Gaps = 49/318 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 32 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGNNTHAYTHSVGEAHH 91
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 92 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTKQDIANLDRIRPKHSRTVDGVLYL 151
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL NY H K P LV RFG+L
Sbjct: 152 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREHNYAHIKRPPGDSMFTLVQRFGELM 211
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH ++ N + N
Sbjct: 212 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRAMKGNKQPN 271
Query: 301 TSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + D ++ D++ + +T+ F+ L DL
Sbjct: 272 SSILYKIFLGEMQIYSRKIPPVEL---DDTAKQQLLATDEYQDKVEQTN---FIYLTCDL 325
Query: 360 PPPPLFKDVMEKNIIPQL 377
PPPPLF D +NIIPQ+
Sbjct: 326 PPPPLFTDEFRENIIPQV 343
>gi|402220082|gb|EJU00155.1| hypothetical protein DACRYDRAFT_55351 [Dacryopinax sp. DJM-731 SS1]
Length = 485
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/315 (47%), Positives = 196/315 (62%), Gaps = 53/315 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+AY+HS+ HHV+IN
Sbjct: 33 YLDTIDRSALDFDFEKLCSVSLSNINIYGCLVCGKYFQGRGRSSYAYSHSIHEDHHVFIN 92
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY ++DPSL+DI
Sbjct: 93 LETTKVYVLPDGYSVSDPSLQDIAAVLSPKFTANQVAGLSTAEHLTRPSYDLASHPYIPG 152
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSPLVHRFGDLTRKIWHARN 249
++GLNNIK D++NV I +L+ V+PLR++ L+ E N ++ S L RF L +K+W+ R
Sbjct: 153 YIGLNNIKRNDYLNVIIHALLHVSPLRDYLLLTELNPKY--SELAKRFATLAKKLWNPRL 210
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECF 308
FK QVSPHEFLQ V +AS +F+I Q +PVEFMSWLLN LH L TKK ++S+IY F
Sbjct: 211 FKAQVSPHEFLQEVTRASAGKFKITEQGDPVEFMSWLLNILHKGLGGTKKRDSSVIYHTF 270
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSD--GGDDHDNITTETSRMPFLMLGLDLPPPPLFK 366
QGE+ + + Q SD G + N +++ PFL L LDLPPPP+F+
Sbjct: 271 QGEVRL-----------DTQQIIVKSDRLGSERPVNTEIKSTSSPFLFLSLDLPPPPIFQ 319
Query: 367 DVMEKNIIPQLQRLS 381
D +EKNIIPQ+ S
Sbjct: 320 DSIEKNIIPQVTLAS 334
>gi|195059123|ref|XP_001995568.1| GH17820 [Drosophila grimshawi]
gi|193896354|gb|EDV95220.1| GH17820 [Drosophila grimshawi]
Length = 491
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 200/318 (62%), Gaps = 49/318 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 34 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGNNTHAYTHSVGEAHH 93
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 94 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFLRNEISKLDQVQPKHSRTVDGILYL 153
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V+PLR++FL ++Y K P LV RFG+L
Sbjct: 154 PGVVGLNNIKANDYCNVVLHALSHVSPLRDYFLREQSYATIKRPPGDSMFTLVQRFGELM 213
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ N + N
Sbjct: 214 RKMWNPRNFKAHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 273
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + D ++ G D++ + +T+ F+ L DL
Sbjct: 274 SSILYKIFLGEMKIYTRKIPPVEL---DDTAKQQLLGTDEYKDQVEQTN---FIYLTCDL 327
Query: 360 PPPPLFKDVMEKNIIPQL 377
PPPPLF D +NIIPQ+
Sbjct: 328 PPPPLFTDEFRENIIPQV 345
>gi|26328829|dbj|BAC28153.1| unnamed protein product [Mus musculus]
Length = 564
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/350 (45%), Positives = 206/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L T KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALVGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 369 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 412
>gi|170031567|ref|XP_001843656.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870484|gb|EDS33867.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 535
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 206/348 (59%), Gaps = 56/348 (16%)
Query: 73 EDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
EDDDED+ + + + RS+ CPYLDT+NR +LDFDFEK CSVSL+ +N
Sbjct: 37 EDDDEDEQKPKVKVDPAQA-ANRSK------QCPYLDTINRHLLDFDFEKLCSVSLTRIN 89
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
VYACLVCGKY+QGRG +HAYTHS+ HHV++NL+T K YCLPD YEI D SL+DI++V
Sbjct: 90 VYACLVCGKYFQGRGTNTHAYTHSVAEAHHVFLNLQTLKFYCLPDNYEIIDSSLDDIKYV 149
Query: 193 ----------------------------------GLNNIKETDFVNVTIQSLMRVTPLRN 218
G+NNIK D+ NV +QSL V P+R+
Sbjct: 150 LNPVFSQRDIRNLDKEDQKMSRTVDGTIYAPGIVGMNNIKANDYCNVILQSLSHVKPIRD 209
Query: 219 FFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 271
FFLI +NY + K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ S K+F
Sbjct: 210 FFLIEKNYANTKRPPGDTAFTLVQRFGELLRKLWNPRNFKAHVSPHEMLQAVVLWSSKKF 269
Query: 272 RIGVQSNPVEFMSWLLNTLHSDLR-NTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQN 329
+I Q +P+EF+SW L++LH LR N + N+S++ F GE+++ +++P + +
Sbjct: 270 QITEQGDPIEFLSWFLHSLHKQLRGNKQPNSSVVNRTFLGEMKIYTRKLPPTELDDVQKQ 329
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+D + +T FL L DLP PLF D +NIIPQ+
Sbjct: 330 LLLATDEYQEKSETST------FLYLTCDLPATPLFIDEFRENIIPQV 371
>gi|189193545|ref|XP_001933111.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187978675|gb|EDU45301.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 546
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 163/382 (42%), Positives = 213/382 (55%), Gaps = 56/382 (14%)
Query: 37 NPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLAN--GYGQGQ 94
+P + A D++ EE + G +G + + ED D + DDL + +
Sbjct: 18 SPAMKRARVEDEEMEELQSNGATSNGHVMSPRLQDQEDADLAEAGASDDLDDEPAIAAPK 77
Query: 95 RSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
R E YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCGKYYQGRG KS AY
Sbjct: 78 RQTAPEAGYADLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCGKYYQGRGPKSQAYF 137
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------ 190
H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+
Sbjct: 138 HALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIKFVVDPRMSKEEVAKLDKEPKVSWD 197
Query: 191 ---------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT 241
VG+NNIK D+ NV IQ+L V PLRN+F++ + K L RF L
Sbjct: 198 LSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFMLED--LSGKPQLAQRFSTLV 255
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKK 299
RKIW+ R FK VSPHE LQ + S KRF + QS+PV+F+SW LN LH + TK
Sbjct: 256 RKIWNPRAFKTHVSPHELLQEISLRSSKRFTLTNQSDPVDFLSWFLNNLHLAVGGSRTKP 315
Query: 300 NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLML 355
++SII + FQG L++ Q +D GD + + TE +R FL+L
Sbjct: 316 SSSIIQKVFQGRLKI-----------EQQEITARADAGDRLRFEDAAVQTEITR--FLVL 362
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
LDLP PLF+D +EKNIIPQ+
Sbjct: 363 TLDLPAAPLFQDALEKNIIPQV 384
>gi|391344446|ref|XP_003746510.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like isoform 1
[Metaseiulus occidentalis]
Length = 505
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 149/316 (47%), Positives = 194/316 (61%), Gaps = 48/316 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+ GHH
Sbjct: 19 RTCPYLDTINRNVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGPSTHAYTHSVHVGHH 78
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL + + +CLPD Y I D SLEDI V
Sbjct: 79 VFLNLESLEFFCLPDNYRIVDSSLEDILFVLQPRFSAEDIKALDKNEKLSIALDGTKYLP 138
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ NV +Q+L V PLR+F + ENY+ K P +V RFG+L R
Sbjct: 139 GVIGLNNIKANDYCNVILQALSVVVPLRDFMIRDENYKDIKRPPGDTMFLIVQRFGELLR 198
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-T 301
K+W+ R+FK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN+LH L T K+ +
Sbjct: 199 KLWNPRHFKAHVSPHEMLQAVVLCSKKRFQITAQGDPIDFVSWFLNSLHIALNGTNKDSS 258
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
SIIY+ F+G + V K + ++ K D + + + +MPF+ L +DLP
Sbjct: 259 SIIYKTFRGRMRVYT---KKLFPTDPEHQPKTYDPSEYEEKM----EKMPFMYLTVDLPS 311
Query: 362 PPLFKDVMEKNIIPQL 377
PLFKD ++NIIPQ+
Sbjct: 312 QPLFKDDQQENIIPQV 327
>gi|195132721|ref|XP_002010791.1| GI21733 [Drosophila mojavensis]
gi|193907579|gb|EDW06446.1| GI21733 [Drosophila mojavensis]
Length = 492
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/318 (46%), Positives = 193/318 (60%), Gaps = 49/318 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 35 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 94
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 95 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFLRNEISKLDQLQPKHSRTVDGVLYL 154
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V+PLR++FL +NY K P LV RFG+L
Sbjct: 155 PGVVGLNNIKANDYCNVVLHALSHVSPLRDYFLREQNYATIKRPPGDSMFTLVQRFGELM 214
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ N + N
Sbjct: 215 RKMWNPRNFKAHVSPHEMLQAVVLWSNKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 274
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+ + ++IP + + +D D + F+ L DL
Sbjct: 275 SSILYKIFLGEMNIYTRKIPPVELDDAAKQQLLATDEYKD------QVEHTNFIYLTCDL 328
Query: 360 PPPPLFKDVMEKNIIPQL 377
PPPPLF D +NIIPQ+
Sbjct: 329 PPPPLFTDEFRENIIPQV 346
>gi|378725539|gb|EHY51998.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
Length = 588
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 170/404 (42%), Positives = 233/404 (57%), Gaps = 67/404 (16%)
Query: 22 VVEQSSPSPPRLGFEN---PLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDED 78
V+ ++SP+ R+ E+ P+AN + G GD+ A NG T +
Sbjct: 13 VLTEASPASKRVRIEDIPEEAQPVANGSTSE------GQNGDTAA---LNGNTASSTESV 63
Query: 79 KDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLSNL 131
D++D +G + + +R++ P YLDT+NR +LDFDFEK CS++LSN+
Sbjct: 64 NQRDDEDETDGEDEDNEVAVAPLRQNAPTEGYSDLYLDTINRSLLDFDFEKLCSITLSNI 123
Query: 132 NVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH 191
NVYACLVCGKY+QGRG KSHAY H+LE HHV+IN+ T+KVY LP+GYE+++ SL+DI++
Sbjct: 124 NVYACLVCGKYFQGRGPKSHAYFHALEVDHHVFINMETKKVYVLPEGYEVHNKSLDDIKY 183
Query: 192 V---------------------------------GLNNIKETDFVNVTIQSLMRVTPLRN 218
V G+NNIK D++NV +Q+L V PLRN
Sbjct: 184 VVDPKFTEEEVKKLDKEPRVSLDLANRKYRPGFIGMNNIKANDYLNVVVQTLAHVAPLRN 243
Query: 219 FFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
FFL+ + H L RF L RK+W+ + FK VSPHE LQ + S KRF + QS+
Sbjct: 244 FFLL-HAFPHTAPQLPVRFSTLVRKLWNPKAFKSHVSPHELLQEIALRSSKRFTLTQQSD 302
Query: 279 PVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEV-VKEI-PKNTISGNDQNTEKGS 334
PVEF+SW LN LH L TK +SII + FQG+L V +EI K+ I+G+ E+ S
Sbjct: 303 PVEFLSWFLNNLHLSLGGSKTKPFSSIIQKAFQGKLRVESQEITAKSDITGDRLRFEESS 362
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME-KNIIPQL 377
T T+ P+L+L LDLPP PLF+D +E KNIIPQ+
Sbjct: 363 ---------TINTNITPYLILTLDLPPVPLFRDAVESKNIIPQV 397
>gi|330914555|ref|XP_003296684.1| hypothetical protein PTT_06849 [Pyrenophora teres f. teres 0-1]
gi|311331025|gb|EFQ95191.1| hypothetical protein PTT_06849 [Pyrenophora teres f. teres 0-1]
Length = 545
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 167/394 (42%), Positives = 213/394 (54%), Gaps = 70/394 (17%)
Query: 39 LLPLANTYD-----------DDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDE-----D 82
L PL YD +D+E EE G + + R + D D E D
Sbjct: 7 LEPLEEVYDAPSPAMKRVRVEDEEMEELQSNGATSNGHVMSPRPQDQQDADLAEAGASDD 66
Query: 83 EDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY 142
+DD +R E YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCGKY
Sbjct: 67 QDDDEPAIAAPKRQTAPEAGYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCGKY 126
Query: 143 YQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------------ 190
YQGRG KS AY H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+
Sbjct: 127 YQGRGPKSQAYFHALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIKFVVDPRMSKEEV 186
Query: 191 ---------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC 229
VG+NNIK D+ NV IQ+L V PLRN+F++ +
Sbjct: 187 AKLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFMLED--LSG 244
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
K L RF L RKIW+ R FK VSPHE LQ + S KRF + QS+PV+F+SW LN
Sbjct: 245 KPQLAQRFSTLVRKIWNPRAFKTHVSPHELLQEIALRSSKRFTLTDQSDPVDFLSWFLNN 304
Query: 290 LHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNI 343
LH + TK ++SII + FQG L++ Q +D GD + +
Sbjct: 305 LHLAVGGSRTKPSSSIIQKVFQGRLKI-----------EQQEITARADAGDRLRFEDAAV 353
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
TE +R FL+L LDLP PLF+D +EKNIIPQ+
Sbjct: 354 QTEITR--FLVLTLDLPAAPLFQDALEKNIIPQV 385
>gi|194892734|ref|XP_001977718.1| GG19194 [Drosophila erecta]
gi|190649367|gb|EDV46645.1| GG19194 [Drosophila erecta]
Length = 494
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 147/318 (46%), Positives = 194/318 (61%), Gaps = 49/318 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y H K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQSYAHVKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ N + N
Sbjct: 216 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + + ++ D T F+ L DL
Sbjct: 276 SSILYKIFLGEMKIYTRKIPPVELDDAAKAQLLATEEYKDQVEYTN------FIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQL 377
PPPPLF D +NIIPQ+
Sbjct: 330 PPPPLFTDEFRENIIPQV 347
>gi|391344448|ref|XP_003746511.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like isoform 2
[Metaseiulus occidentalis]
Length = 492
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 195/318 (61%), Gaps = 48/318 (15%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
+ R CPYLDT+NR VLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS+ G
Sbjct: 4 MHRTCPYLDTINRNVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGPSTHAYTHSVHVG 63
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
HHV++NL + + +CLPD Y I D SLEDI V
Sbjct: 64 HHVFLNLESLEFFCLPDNYRIVDSSLEDILFVLQPRFSAEDIKALDKNEKLSIALDGTKY 123
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDL 240
GLNNIK D+ NV +Q+L V PLR+F + ENY+ K P +V RFG+L
Sbjct: 124 LPGVIGLNNIKANDYCNVILQALSVVVPLRDFMIRDENYKDIKRPPGDTMFLIVQRFGEL 183
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
RK+W+ R+FK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN+LH L T K+
Sbjct: 184 LRKLWNPRHFKAHVSPHEMLQAVVLCSKKRFQITAQGDPIDFVSWFLNSLHIALNGTNKD 243
Query: 301 -TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SIIY+ F+G + V K + ++ K D + + + +MPF+ L +DL
Sbjct: 244 SSSIIYKTFRGRMRVYT---KKLFPTDPEHQPKTYDPSEYEEKM----EKMPFMYLTVDL 296
Query: 360 PPPPLFKDVMEKNIIPQL 377
P PLFKD ++NIIPQ+
Sbjct: 297 PSQPLFKDDQQENIIPQV 314
>gi|195392656|ref|XP_002054973.1| GJ19115 [Drosophila virilis]
gi|194149483|gb|EDW65174.1| GJ19115 [Drosophila virilis]
Length = 493
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 198/318 (62%), Gaps = 49/318 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFLRNEISKLDKVKPKHSRTVDGILYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL +NY K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQNYATIKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ N + N
Sbjct: 216 RKMWNPRNFKAHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + D + ++ D++ + T+ F+ L DL
Sbjct: 276 SSILYKIFLGEMKIYTRKIPPVEL---DDSAKQQLLATDEYKHQVEHTN---FIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQL 377
PPPPLF D +NIIPQ+
Sbjct: 330 PPPPLFTDEFRENIIPQV 347
>gi|339239199|ref|XP_003381154.1| u4/U6.U5 tri-snRNP-associated protein 2 [Trichinella spiralis]
gi|316975834|gb|EFV59230.1| u4/U6.U5 tri-snRNP-associated protein 2 [Trichinella spiralis]
Length = 538
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 225/388 (57%), Gaps = 62/388 (15%)
Query: 42 LANTY--DDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRL- 98
+++TY + EEEE G KV + E + K+ D + + + + S L
Sbjct: 1 MSDTYHHKNSPEEEEENGPVKKKFKVEV---SAEKLNVSKNPDHVNEVDNHVDEEESTLT 57
Query: 99 ------VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHA 152
+ + R CPYLD++NRQVLDFDFEK CSVSLS+LNVYACLVCGKY+QGRG +HA
Sbjct: 58 LPSEPQLNLSRSCPYLDSINRQVLDFDFEKLCSVSLSHLNVYACLVCGKYFQGRGNNTHA 117
Query: 153 YTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------------------- 192
YTHS++ GH V++NL+T + YCLPD YEI D SL+DI++V
Sbjct: 118 YTHSVDIGHRVFLNLQTLRFYCLPDNYEIIDSSLDDIKYVLKPTYSPEHISTLSSNTKLS 177
Query: 193 -------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------- 232
GLN IK D++NV +Q+L V PLR++FL +NY++ K P
Sbjct: 178 RAFDGTTYYPGMVGLNIIKANDYMNVILQALAHVPPLRDYFLCEDNYKNVKRPPGDKMVL 237
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L RFG+L RK+W+ RNFK VSPHE LQAV+ S KRF+I Q + ++ +SWLLN LH
Sbjct: 238 LYQRFGELIRKMWNPRNFKAHVSPHEMLQAVVLCSNKRFQITEQGDAIDVLSWLLNALHV 297
Query: 293 DLRNT-KKNTSIIYECFQGELEVVKE--IPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
L T + ++SIIY F+G++ K +P + N++ + + + +
Sbjct: 298 SLNGTNRTDSSIIYRTFRGKMRTFKRQVLP---VDANEEERTRLLLTEEYQERV----QN 350
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+PFL L LDLPP PL++D +NIIPQ+
Sbjct: 351 LPFLFLTLDLPPAPLYRDEFFQNIIPQV 378
>gi|170084453|ref|XP_001873450.1| spindle pole body protein [Laccaria bicolor S238N-H82]
gi|164651002|gb|EDR15242.1| spindle pole body protein [Laccaria bicolor S238N-H82]
Length = 519
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/320 (48%), Positives = 195/320 (60%), Gaps = 48/320 (15%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHS 156
R E R YLDT+NR +LDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+KS+AY HS
Sbjct: 53 RAEESRASDLYLDTINRAILDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGRKSYAYAHS 112
Query: 157 LEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------ 192
+ HHV+INL T KVY LPDGY ++DPSLEDI +V
Sbjct: 113 IHDDHHVFINLETTKVYVLPDGYLVSDPSLEDISYVLAPSFTPSSIAHLSSNTHILKPSY 172
Query: 193 ------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDL 240
GLNNIK D +NV I SL+ + PLR+ L+ YR +S L+ RF L
Sbjct: 173 DLTNKPYLPGYVGLNNIKRNDHMNVIIHSLLHIPPLRDSLLL-SRYRGKESELLKRFAGL 231
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
+K+W+ R FK QVSPHEFLQ V +AS +FR+ Q +P EF+ WLLN LH DL TKK
Sbjct: 232 AKKVWNPRLFKSQVSPHEFLQEVNRASGGKFRLEQQGDPAEFLGWLLNRLHKDLGGTKKK 291
Query: 301 -TSIIYECFQGE--LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGL 357
+S I+ FQGE LE + + + + ND+ D +I T S PFL L +
Sbjct: 292 CSSTIFSTFQGELRLETQQVLVRPDVGENDKPR------FDIDRDIKTSVS--PFLFLAV 343
Query: 358 DLPPPPLFKDVMEKNIIPQL 377
DLPPPPLF+D +EKNIIPQ+
Sbjct: 344 DLPPPPLFQDAIEKNIIPQV 363
>gi|195481512|ref|XP_002101675.1| GE17756 [Drosophila yakuba]
gi|194189199|gb|EDX02783.1| GE17756 [Drosophila yakuba]
Length = 494
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/318 (45%), Positives = 194/318 (61%), Gaps = 49/318 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y H K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQSYAHVKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ N + N
Sbjct: 216 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y+ F GE+++ ++IP + + ++ D + F+ L DL
Sbjct: 276 SSILYKIFLGEMKIYTRKIPPVELDDAAKAQLLATEEYKD------QVEHTNFIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQL 377
PPPPLF D +NIIPQ+
Sbjct: 330 PPPPLFTDEFRENIIPQV 347
>gi|396457844|ref|XP_003833535.1| similar to U4/U6.U5 tri-snRNP-associated protein [Leptosphaeria
maculans JN3]
gi|312210083|emb|CBX90170.1| similar to U4/U6.U5 tri-snRNP-associated protein [Leptosphaeria
maculans JN3]
Length = 554
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/322 (47%), Positives = 191/322 (59%), Gaps = 61/322 (18%)
Query: 102 RRDCP-------YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYT 154
R+D P YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCGKYYQGRG KS AY
Sbjct: 91 RQDAPETGYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCGKYYQGRGPKSQAYF 150
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------ 190
H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+
Sbjct: 151 HALEEGHHVYVNMETKKVYVLPEGYEVKSKSLDDIKFVVDPRMTKSEVARLDKEPKVSWD 210
Query: 191 ---------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT 241
VG+NNIK D+ NV IQ+L V PLRN+F++ + + L RF L
Sbjct: 211 LSNREYIPGFVGMNNIKANDYFNVAIQALAHVVPLRNYFMLED--LSSRPQLAQRFSTLV 268
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKK 299
RKIW+ R FK VSPHE LQ + S KRF + QS+PV+F+SW LN LH + TK
Sbjct: 269 RKIWNPRAFKTHVSPHELLQEIALRSSKRFSLSEQSDPVDFLSWFLNNLHLAVGGSKTKP 328
Query: 300 NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLML 355
+SII + FQG L++ Q +D GD + + TETSR FL+L
Sbjct: 329 GSSIIQKVFQGTLKI-----------ESQEITARADAGDRLRFEDAAVKTETSR--FLIL 375
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
LDLP PLF+D +EKNIIPQ+
Sbjct: 376 TLDLPSAPLFQDALEKNIIPQV 397
>gi|157124289|ref|XP_001660405.1| ubiquitin specific protease 39 and snrnp assembly factor [Aedes
aegypti]
gi|108882840|gb|EAT47065.1| AAEL001827-PA [Aedes aegypti]
Length = 520
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 194/316 (61%), Gaps = 49/316 (15%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+ HHV+
Sbjct: 58 CPYLDTINRHLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVF 117
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHV-------------------------------- 192
+NL T K YCLPD YEI D SL+DI++V
Sbjct: 118 LNLSTLKFYCLPDNYEIIDSSLDDIKYVLNPVFTGRDIRNLDKEDQKMSRTVDGTLYSPG 177
Query: 193 --GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRK 243
G+NNIK D+ NV +QSL V P+R+FFLI +NY + K P LV RFG+L RK
Sbjct: 178 IVGMNNIKANDYCNVILQSLSHVKPIRDFFLIEKNYANIKRPPGDTAFTLVQRFGELLRK 237
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKNTS 302
+W+ RNFK VSPHE LQAV+ S K+F+I Q +P+EF+SW L+ LH LR N + N+S
Sbjct: 238 LWNPRNFKPHVSPHEMLQAVVLWSSKKFQITEQGDPIEFLSWFLHILHKQLRGNKQPNSS 297
Query: 303 IIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
++Y F GE+++ +++P + + +D + + + T T FL L DLP
Sbjct: 298 VVYRTFLGEMKIYTRKLPPTELDDVQKQLLLATD--EYQEKVETST----FLYLTCDLPA 351
Query: 362 PPLFKDVMEKNIIPQL 377
PLF D +NIIPQ+
Sbjct: 352 TPLFIDEFRENIIPQV 367
>gi|195345567|ref|XP_002039340.1| GM22925 [Drosophila sechellia]
gi|194134566|gb|EDW56082.1| GM22925 [Drosophila sechellia]
Length = 494
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/322 (45%), Positives = 195/322 (60%), Gaps = 57/322 (17%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y H P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVMRPPGDSVFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ N + N
Sbjct: 216 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPK----NTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
+SI+Y+ F GE+++ ++IP + TE+ D +D + F+ L
Sbjct: 276 SSILYKIFLGEMKIYTRKIPPVELDDATKAKLLATEEYKDQVEDKN----------FIYL 325
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
DLPPPPLF D +NIIPQ+
Sbjct: 326 TCDLPPPPLFTDEFRENIIPQV 347
>gi|336472371|gb|EGO60531.1| hypothetical protein NEUTE1DRAFT_75709 [Neurospora tetrasperma FGSC
2508]
gi|350294407|gb|EGZ75492.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
Length = 560
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/362 (45%), Positives = 221/362 (61%), Gaps = 57/362 (15%)
Query: 59 GDSGAKVGQ-NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDT 110
G + KV Q NG G + +E KDE++DDL G ++ +R+ P YLDT
Sbjct: 49 GSNEEKVEQTNG--GNNSNEVKDEEDDDLEAGEEVEVKA---PIRQAAPTEGYDDLYLDT 103
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
++R VLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ GHHVYIN+ T+
Sbjct: 104 IDRNVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEGHHVYINMSTQ 163
Query: 171 KVYCLPDGYEINDPSLEDIRHV---------------------------------GLNNI 197
KVY LP+GYE+ SL+DI++V G+NNI
Sbjct: 164 KVYVLPEGYEVKSKSLDDIKYVSDPRYTRQEVLDLDRKPHVSRTLLGKEYVPGFVGMNNI 223
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
KE D++NV +Q+L V+PLRNFFL+ E++ + LV R L RKIW+ R FK VSPH
Sbjct: 224 KENDYLNVIVQALSHVSPLRNFFLL-EDFSNAPE-LVKRTSILFRKIWNPRAFKSHVSPH 281
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVV 315
E LQ + S K+F + QS+PVEF+SW LN LH L TK ++S+I FQG+L+V
Sbjct: 282 ELLQEISLRSNKKFTLTQQSDPVEFLSWFLNHLHLGLGGSKTKPHSSVIQHIFQGKLKVE 341
Query: 316 KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIP 375
+ + DQ ++ ++ ++ + SR FL+L LDLPP PLF+D E+NIIP
Sbjct: 342 SQA---ITARADQVHDRLR--FEEAADVQSSVSR--FLLLTLDLPPAPLFQDEQERNIIP 394
Query: 376 QL 377
Q+
Sbjct: 395 QV 396
>gi|212537605|ref|XP_002148958.1| snRNP assembly factor, putative [Talaromyces marneffei ATCC 18224]
gi|210068700|gb|EEA22791.1| snRNP assembly factor, putative [Talaromyces marneffei ATCC 18224]
Length = 612
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/343 (46%), Positives = 201/343 (58%), Gaps = 50/343 (14%)
Query: 73 EDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
E + D DE+E LA Q Q VE D YLDT+NR VLDFDFEK CSVSLSN+N
Sbjct: 71 ESPEADDDEEEAQLAVPQRQSQP---VEGYGDL-YLDTINRAVLDFDFEKLCSVSLSNIN 126
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR-- 190
VYACLVCGKY+QGRG KSHAY H+LE GHHV++N+ T+KVY LP+GYE+ SL+DI+
Sbjct: 127 VYACLVCGKYFQGRGNKSHAYFHALEIGHHVFVNMETKKVYVLPEGYEVKSKSLDDIKYV 186
Query: 191 -------------------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNF 219
+VG+NNIK D++NV +Q L VTP+RNF
Sbjct: 187 VDPTFTKNDVLKLDKEVRDAWDLLGKKYRPGYVGMNNIKANDYLNVVVQVLAHVTPIRNF 246
Query: 220 FLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
FL+ +N+ SP L RF L RK+W+ + FK VSPHE LQ + S KRF + QS+
Sbjct: 247 FLL-QNFPVPGSPQLSVRFSTLVRKLWNPKAFKSHVSPHELLQEIALRSSKRFTLTHQSD 305
Query: 279 PVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
PVEF+SW LN LH L +KK TS+I + FQG L I I+ + T
Sbjct: 306 PVEFLSWFLNNLHLTLGGSKKPSKAPTSVIQQAFQGHL----RIESQAITAHSDTTNSRL 361
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + T T PFL+L LDLPP PLF+ ++IIPQ+
Sbjct: 362 VFAESSE---TNTQTSPFLILTLDLPPTPLFQSANRESIIPQI 401
>gi|392570880|gb|EIW64052.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 524
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 146/308 (47%), Positives = 193/308 (62%), Gaps = 44/308 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVS SN+N+Y CLVCGKY+QGRG+ S+A+ H++ HHV+IN
Sbjct: 63 YLDTINRAVLDFDFEKVCSVSSSNINIYGCLVCGKYFQGRGRNSYAFAHAIHDDHHVFIN 122
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY ++DPSLEDI
Sbjct: 123 LETTKVYVLPDGYPVSDPSLEDISFVLSPTFTQASTSTLSTPIHLQKPSYDLSNKSYVPG 182
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLNNIK D++NV I SL+ V PLR+ L+ NYR +S L+ RF L +K+W+ R F
Sbjct: 183 YIGLNNIKRNDYLNVVIHSLLHVAPLRDHLLL-SNYRGKQSELLRRFAGLAKKLWNPRLF 241
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQ 309
K QVSPHEFLQ V +AS +F + Q +PVEF+ WLLN LH D+ T KKN+S+I+ FQ
Sbjct: 242 KSQVSPHEFLQEVNRASTGKFSLEKQGDPVEFLGWLLNRLHKDMGGTKKKNSSVIFSTFQ 301
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
GE+ + E + + + + E+ D +++ PFL L +DLPPPPLF+D +
Sbjct: 302 GEVRM--ETQQVLVRPDSETGERPRFDIDRE----LKSAVSPFLFLAVDLPPPPLFQDSV 355
Query: 370 EKNIIPQL 377
EKNIIPQ+
Sbjct: 356 EKNIIPQV 363
>gi|198469718|ref|XP_002134392.1| GA23380 [Drosophila pseudoobscura pseudoobscura]
gi|198147002|gb|EDY73019.1| GA23380 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 194/318 (61%), Gaps = 49/318 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTKQEISKLDFVLPKQSRTVDGILYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y K P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLREQSYAKIKRPPGDSMFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ N + N
Sbjct: 216 RKMWNPRNFKAHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPN 275
Query: 301 TSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+SI+Y F GE+++ +++P + +D EK + D + F+ L DL
Sbjct: 276 SSILYNIFLGEMQIFTRKMPP--VELDDAAKEKLLATEEYQDQV----EHTNFIYLTCDL 329
Query: 360 PPPPLFKDVMEKNIIPQL 377
PPPPLF D +NIIPQ+
Sbjct: 330 PPPPLFTDEFRENIIPQV 347
>gi|392597787|gb|EIW87109.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 531
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 199/333 (59%), Gaps = 54/333 (16%)
Query: 83 EDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY 142
E G GQ + S L YLDT+NR LDFDFEK CSVSLSN+NVY CLVCGKY
Sbjct: 47 EQAAKTGKGQPRASDL--------YLDTINRAQLDFDFEKLCSVSLSNINVYGCLVCGKY 98
Query: 143 YQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------------ 190
+QGRG+ S+AY HS+ HHV+INL T KVY LPDGY ++DPSLEDI
Sbjct: 99 FQGRGKSSYAYYHSIHEDHHVFINLETTKVYVLPDGYAVSDPSLEDISFVLNPSFTKSAT 158
Query: 191 ------------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
+VGLNNIK+ D +NV I +L+ + PLR++ L+
Sbjct: 159 AALSTPAHLSRPSYDLAGHAYLPGYVGLNNIKKNDHMNVIIHALLHIPPLRDYLLLTRPT 218
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
++ LV RF L +K+W+ R FK QVSPHEFLQ V +AS RFR+ Q +PVEF+ WL
Sbjct: 219 GK-ETELVRRFAVLAKKLWNPRLFKSQVSPHEFLQEVNRASTGRFRLENQGDPVEFLGWL 277
Query: 287 LNTLHSDLRNT-KKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
LN LH D+ T KKN+SII+ FQGEL +++ +G ++ D +I
Sbjct: 278 LNRLHQDMGGTRKKNSSIIFSTFQGELRAQTQQVLVRPDTGTNEKPR-----FDIARDIR 332
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
T S PFL L +DLPPPPLF+D +EKNIIPQ+
Sbjct: 333 TTVS--PFLFLAVDLPPPPLFQDAVEKNIIPQV 363
>gi|358366048|dbj|GAA82669.1| snRNP assembly factor [Aspergillus kawachii IFO 4308]
Length = 616
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 228/405 (56%), Gaps = 72/405 (17%)
Query: 24 EQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGR---------GDSGAKVGQNGRTGED 74
E+ S + PR G LP+ + EE E G+ G+ A+ Q+G E
Sbjct: 29 EELSENDPRRG----ALPIRRATGQELEEHERSGQNILAAADQEGEELAEAAQDG-GPES 83
Query: 75 DDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVY 134
D D D+D+ +A ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVY
Sbjct: 84 SDVDADDDKPVIA---APKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVY 139
Query: 135 ACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--- 191
ACLVCGKY+QGRG KSHAY H+LE GHHV++N+ T+KVY LP+GYE+ + SL+DI++
Sbjct: 140 ACLVCGKYFQGRGPKSHAYFHALEVGHHVFVNMGTKKVYVLPEGYEVKNQSLDDIKYVVD 199
Query: 192 ------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
VG+NNIK D++NV +Q L V P+RN+FL
Sbjct: 200 PYYNKDEVMKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPIRNYFL 259
Query: 222 IPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
+ E + L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PV+
Sbjct: 260 LHEFPQPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVD 319
Query: 282 FMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEK 332
FMSW LN LH L +KK TS++ FQG L + E T + QN TE
Sbjct: 320 FMSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLVFTES 377
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
GS I ++T+ PFL+L LDLPP PLF+ ++IIPQ+
Sbjct: 378 GS--------INSQTT--PFLILTLDLPPTPLFQSANRESIIPQV 412
>gi|395508822|ref|XP_003758708.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Sarcophilus
harrisii]
Length = 607
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/403 (42%), Positives = 220/403 (54%), Gaps = 63/403 (15%)
Query: 32 RLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRT------------GEDDDEDK 79
R G P P A D G RG + G+ G G ++
Sbjct: 59 RAGAAAPGQPSAPARRDSARSGPGGRRGCLAVRKGRRGAAPRAXXXXXXXXPGTRVKRER 118
Query: 80 DEDEDDLANGYGQGQRSRL-VEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
+ DED G+ + RL E RR CPYLDT+NR VLDFDFEK CS+SLS++N YAC
Sbjct: 119 EADEDSEPEREGRVRYGRLDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYAC 178
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---- 192
LVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 179 LVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPT 238
Query: 193 -----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
GLNNIK D+ N +Q+L V PLRN+FL
Sbjct: 239 FTKQQISNLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEE 298
Query: 224 ENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
ENY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q
Sbjct: 299 ENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQ 358
Query: 277 SNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGS 334
+ V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++ +
Sbjct: 359 GDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHN 418
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 419 ---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 455
>gi|241117268|ref|XP_002401865.1| ubiquitin specific peptidase, putative [Ixodes scapularis]
gi|215493221|gb|EEC02862.1| ubiquitin specific peptidase, putative [Ixodes scapularis]
Length = 505
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 197/326 (60%), Gaps = 57/326 (17%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
RR+CPYLDT+NR VLDFDFEK CSVSLS +NVYACLVCGKY+QGRG +HAYTHS++ H
Sbjct: 35 RRNCPYLDTINRNVLDFDFEKLCSVSLSKINVYACLVCGKYFQGRGTNTHAYTHSVQVSH 94
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
HV++NL+T + YCLPD YEI D SL+DI +
Sbjct: 95 HVFLNLQTLRFYCLPDNYEIVDSSLDDITYVLRPTFTKGDIIRLDLSDRLSRAYDGTTYL 154
Query: 192 ---VGLNNIKETDFVNVTIQ-------SLMRVTPLRNFFLIPENYRHCKSP-------LV 234
VGLNNIK D+ NV +Q +L V PLRN+FL ENY K P +V
Sbjct: 155 PGIVGLNNIKANDYCNVVLQASAAGLAALSHVPPLRNYFLREENYAALKRPPGDITSLIV 214
Query: 235 HRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
RFG+L RK+W+ RNFK VSPHE LQAV+ SKKRF+I Q +P++F+SW LN+LH L
Sbjct: 215 QRFGELIRKLWNPRNFKAHVSPHEMLQAVVLCSKKRFQITEQGDPIDFLSWFLNSLHLAL 274
Query: 295 RNT-KKNTSIIYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP 351
T K+++SI+Y+ F+G + + K +P + + ++ + +N
Sbjct: 275 NGTQKRSSSIVYKTFRGGMNIYSRKVVPVEHTEAERRAALRTAEYQEKVENTG------- 327
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQL 377
F+ L DLP PLFKD + +NIIPQ+
Sbjct: 328 FMYLTADLPAQPLFKDELRENIIPQV 353
>gi|350632101|gb|EHA20469.1| hypothetical protein ASPNIDRAFT_44214 [Aspergillus niger ATCC 1015]
Length = 616
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 223/398 (56%), Gaps = 72/398 (18%)
Query: 31 PRLGFENPLLPLANTYDDDDEEEEYGGR---------GDSGAKVGQNGRTGEDDDEDKDE 81
PR G LP+ EE E G+ G+ A+ Q+G E D D D+
Sbjct: 36 PRRG----ALPIRRATGQQLEEHERSGQDILAAADQEGEELAEAAQDGGP-ESSDIDADD 90
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
D+ +A ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVYACLVCGK
Sbjct: 91 DKPVIA---APKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVYACLVCGK 146
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------- 191
Y+QGRG KSHAY H+LE GHHV++N+ T+KVY LP+GYE+ + SL+DI++
Sbjct: 147 YFQGRGPKSHAYFHALEVGHHVFVNMGTKKVYVLPEGYEVKNQSLDDIKYVVDPYYSKDE 206
Query: 192 -----------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
VG+NNIK D++NV +Q L V P+RN+FL+ E +
Sbjct: 207 VMKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPIRNYFLLHEFPQP 266
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PVEFMSW LN
Sbjct: 267 GTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVEFMSWFLN 326
Query: 289 TLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEKGSDGGDD 339
LH L +KK TS++ FQG L + E T + QN TE GS
Sbjct: 327 NLHLSLGGSKKPSKAPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLVFTESGS----- 379
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
I ++T+ PFL+L LDLPP PLF+ ++IIPQ+
Sbjct: 380 ---INSQTT--PFLILTLDLPPTPLFQSANRESIIPQV 412
>gi|317038065|ref|XP_001401556.2| snRNP assembly factor [Aspergillus niger CBS 513.88]
Length = 616
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 223/398 (56%), Gaps = 72/398 (18%)
Query: 31 PRLGFENPLLPLANTYDDDDEEEEYGGR---------GDSGAKVGQNGRTGEDDDEDKDE 81
PR G LP+ EE E G+ G+ A+ Q+G E D D D+
Sbjct: 36 PRRG----ALPIRRATGQQLEEHERSGQDILAAADQEGEELAEAAQDGGP-ESSDIDADD 90
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
D+ +A ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVYACLVCGK
Sbjct: 91 DKPVIA---APKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVYACLVCGK 146
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------- 191
Y+QGRG KSHAY H+LE GHHV++N+ T+KVY LP+GYE+ + SL+DI++
Sbjct: 147 YFQGRGPKSHAYFHALEVGHHVFVNMGTKKVYVLPEGYEVKNQSLDDIKYVVDPYYSKDE 206
Query: 192 -----------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
VG+NNIK D++NV +Q L V P+RN+FL+ E +
Sbjct: 207 VMKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPIRNYFLLHEFPQP 266
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PVEFMSW LN
Sbjct: 267 GTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVEFMSWFLN 326
Query: 289 TLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEKGSDGGDD 339
LH L +KK TS++ FQG L + E T + QN TE GS
Sbjct: 327 NLHLSLGGSKKPSKTPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLVFTESGS----- 379
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
I ++T+ PFL+L LDLPP PLF+ ++IIPQ+
Sbjct: 380 ---INSQTT--PFLILTLDLPPTPLFQSANRESIIPQV 412
>gi|158296728|ref|XP_317070.4| AGAP008381-PA [Anopheles gambiae str. PEST]
gi|157014851|gb|EAA12281.4| AGAP008381-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 201/329 (61%), Gaps = 49/329 (14%)
Query: 92 QGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
Q ++ + + + CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +H
Sbjct: 32 QRRKQTVTDRSKQCPYLDTINRHLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTH 91
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------- 192
AYTHS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 92 AYTHSVAESHHVFLNLSTLKFYCLPDNYEIIDSSLDDIKYVLDPVFTVRDIRSLDREDVK 151
Query: 193 ---------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----- 232
GLNNIK D+ NV +Q+L V P+R+FFL+ +NY + K P
Sbjct: 152 QSRTVDGTFYHPGVVGLNNIKANDYCNVILQALSHVKPIRDFFLMEKNYANIKRPPGDTA 211
Query: 233 --LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
LV RFG+L RK+W+ RNFK VSPHE LQAV+ S K+F+I Q +P+EF+SW L++L
Sbjct: 212 FTLVQRFGELLRKLWNPRNFKAHVSPHEMLQAVVLWSSKQFQITKQGDPIEFLSWFLHSL 271
Query: 291 HSDLR-NTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETS 348
H LR N + ++S+I F GE+++ +++P + + +D + + + T T
Sbjct: 272 HKQLRGNKQPDSSVINRSFLGEMKIYTRKLPPTELDDVQKQLLLATD--EYQEKVETST- 328
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
FL L DLP PLF D + +NIIPQ+
Sbjct: 329 ---FLYLTCDLPATPLFIDELRENIIPQV 354
>gi|451998697|gb|EMD91161.1| hypothetical protein COCHEDRAFT_1137659 [Cochliobolus
heterostrophus C5]
Length = 551
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 211/393 (53%), Gaps = 67/393 (17%)
Query: 39 LLPLANTYDDDD--------EEEEYGGRGDSGAKVGQNGRTGEDDDEDKDE--------- 81
L PL YD E+EE +GA + D+DK +
Sbjct: 7 LEPLEEMYDAPSPAMKRPKVEDEEMEDSDTNGATSNGHLMAPRPQDQDKIDILEEAGALD 66
Query: 82 DEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGK 141
DEDD +R E YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCGK
Sbjct: 67 DEDDDEPAVAAPKRQSAPEAGYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCGK 126
Query: 142 YYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR----------- 190
YYQGRG KS AY H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+
Sbjct: 127 YYQGRGPKSQAYFHALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIKFVVDPRMSKEE 186
Query: 191 ----------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
VG+NNIK D+ NV IQ+L V PLRN+F++ +
Sbjct: 187 VAKLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFMLED--LS 244
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
+ L RF L RKIW+ R FK VSPHE LQ + S KRF + QS+PV+F+SW LN
Sbjct: 245 NRPQLAQRFSTLVRKIWNPRAFKTHVSPHELLQEIALRSSKRFTLTDQSDPVDFLSWFLN 304
Query: 289 TLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD--DHDNIT 344
LH + TK ++SII + FQG L++ Q +D GD ++
Sbjct: 305 NLHLAVGGSRTKPHSSIIQKVFQGTLKI-----------EQQEITARADAGDRLRFEDAA 353
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+T+ FL+L LDLP PLF+D +EKNIIPQ+
Sbjct: 354 VQTTTSHFLVLTLDLPAAPLFQDALEKNIIPQV 386
>gi|451848874|gb|EMD62179.1| hypothetical protein COCSADRAFT_147685 [Cochliobolus sativus
ND90Pr]
Length = 548
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/344 (44%), Positives = 196/344 (56%), Gaps = 56/344 (16%)
Query: 71 TGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 130
G DDED DE +R E YLDT+NR+VLDFDFEK CSV+LSN
Sbjct: 62 AGALDDEDGDEP------AVAAPKRQSAPEAGYTDLYLDTINRKVLDFDFEKLCSVTLSN 115
Query: 131 LNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR 190
+NVYACLVCGKYYQGRG KS AY H+LE GHHVY+N+ T+KVY LP+GYE+ SL+DI+
Sbjct: 116 INVYACLVCGKYYQGRGPKSQAYFHALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIK 175
Query: 191 ---------------------------------HVGLNNIKETDFVNVTIQSLMRVTPLR 217
VG+NNIK D+ NV IQ+L V PLR
Sbjct: 176 FVVDPRMSKEEVAKLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLR 235
Query: 218 NFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
N+F++ + + L RF L RKIW+ R FK VSPHE LQ + S KRF + QS
Sbjct: 236 NYFMLED--LSNRPQLAQRFSTLVRKIWNPRAFKTHVSPHELLQEIALRSSKRFTLTDQS 293
Query: 278 NPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD 335
+PV+F+SW LN LH + TK ++SII + FQG L++ Q +D
Sbjct: 294 DPVDFLSWFLNNLHLAVGGSRTKPHSSIIQKVFQGTLKI-----------EQQEITARAD 342
Query: 336 GGD--DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
GD ++ +T+ FL+L LDLP PLF+D +EKNIIPQ+
Sbjct: 343 AGDRLRFEDAAVQTTTSHFLVLTLDLPAAPLFQDALEKNIIPQV 386
>gi|134058466|emb|CAL00675.1| unnamed protein product [Aspergillus niger]
Length = 577
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 220/389 (56%), Gaps = 68/389 (17%)
Query: 40 LPLANTYDDDDEEEEYGGR---------GDSGAKVGQNGRTGEDDDEDKDEDEDDLANGY 90
LP+ EE E G+ G+ A+ Q+G E D D D+D+ +A
Sbjct: 41 LPIRRATGQQLEEHERSGQDILAAADQEGEELAEAAQDG-GPESSDIDADDDKPVIA--- 96
Query: 91 GQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKS 150
++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KS
Sbjct: 97 APKRQSAPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKS 155
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------- 191
HAY H+LE GHHV++N+ T+KVY LP+GYE+ + SL+DI++
Sbjct: 156 HAYFHALEVGHHVFVNMGTKKVYVLPEGYEVKNQSLDDIKYVVDPYYSKDEVMKLDKEVH 215
Query: 192 --------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRF 237
VG+NNIK D++NV +Q L V P+RN+FL+ E + L RF
Sbjct: 216 DAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPIRNYFLLHEFPQPGTPQLALRF 275
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
L RK+W+ + F+ VSPHE LQ + S KRF + QS+PVEFMSW LN LH L +
Sbjct: 276 STLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVEFMSWFLNNLHLSLGGS 335
Query: 298 KK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETS 348
KK TS++ FQG L + E T + QN TE GS I ++T+
Sbjct: 336 KKPSKTPTSVVQAAFQGHLRI--ESQAITAHSDTQNARLVFTESGS--------INSQTT 385
Query: 349 RMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
PFL+L LDLPP PLF+ ++IIPQ+
Sbjct: 386 --PFLILTLDLPPTPLFQSANRESIIPQV 412
>gi|126305343|ref|XP_001363937.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2 [Monodelphis
domestica]
Length = 572
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 210/359 (58%), Gaps = 55/359 (15%)
Query: 61 SGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDF 120
SGA+V R E D++ + E E + G + R R CPYLDT+NR VLDFDF
Sbjct: 75 SGARVK---REREIDEDSEPEREVRVRYGRLDSEDRR----SRHCPYLDTINRSVLDFDF 127
Query: 121 EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE 180
EK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YE
Sbjct: 128 EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE 187
Query: 181 INDPSLEDIRHV---------------------------------GLNNIKETDFVNVTI 207
I D SLEDI +V GLNNIK D+ N +
Sbjct: 188 IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL 247
Query: 208 QSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFL 260
Q+L V PLRN+FL ENY++ K P LV RFG+L RK+W+ RNFK VSPHE L
Sbjct: 248 QALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML 307
Query: 261 QAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEI 318
QAV+ SKK F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++
Sbjct: 308 QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL 367
Query: 319 PKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
P + ++ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 368 PHPDLPAEEKEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 420
>gi|18859907|ref|NP_573334.1| CG7288 [Drosophila melanogaster]
gi|16769542|gb|AAL28990.1| LD38070p [Drosophila melanogaster]
gi|22832531|gb|AAF48897.2| CG7288 [Drosophila melanogaster]
gi|220946848|gb|ACL85967.1| CG7288-PA [synthetic construct]
Length = 494
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/322 (45%), Positives = 194/322 (60%), Gaps = 57/322 (17%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T + YCLPD YEI D SL+DI++V
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLT 241
GLNNIK D+ NV + +L V PLR++FL ++Y H P LV RFG+L
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVRPPGDSVFTLVQRFGELM 215
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKN 300
RK+W+ RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ N N
Sbjct: 216 RKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKHPN 275
Query: 301 TSIIYECFQGELEV-VKEIPK----NTISGNDQNTEKGSDGGDDHDNITTETSRMPFLML 355
+SI+Y+ F GE+++ +++P + TE+ D +D + F+ L
Sbjct: 276 SSILYKIFLGEMKIYTRKMPPVELDDAAKAQLLATEEYKDQVEDKN----------FIYL 325
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
DLPPPPLF D +NIIPQ+
Sbjct: 326 TCDLPPPPLFTDEFRENIIPQV 347
>gi|336269902|ref|XP_003349711.1| hypothetical protein SMAC_07064 [Sordaria macrospora k-hell]
gi|380088850|emb|CCC13285.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 541
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 221/373 (59%), Gaps = 48/373 (12%)
Query: 43 ANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDE---DEDDLANGYGQGQRSRLV 99
A+ ++ DE E + G N E +DE+ D+ DED+ +++
Sbjct: 37 ASAVENGDETREGSNEEKAEQTNGDNNNNAEVNDEEDDDLRADEDEEVEEKAPIRQAAPT 96
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
E D YLDT++R VLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+
Sbjct: 97 EGYDDL-YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDE 155
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------------- 192
GHHVYIN+ T+KVY LP+GYE+ SL+DI++V
Sbjct: 156 GHHVYINMSTQKVYVLPEGYEVKSKSLDDIKYVSDPRYTRQEVMDLDRKPHLSRTLLGKE 215
Query: 193 ------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWH 246
G+NNIKE D++NV +Q+L V+PLRNFFL+ E++ + LV R L RKIW+
Sbjct: 216 YVPGFVGMNNIKENDYLNVIVQALSHVSPLRNFFLL-EDFSNAPE-LVKRTSILFRKIWN 273
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSII 304
R FK VSPHE LQ + S K+F + QS+PVEF+SW LN LH L TK ++S+I
Sbjct: 274 PRAFKSHVSPHELLQEISLRSNKKFTLTQQSDPVEFLSWFLNHLHLGLGGSKTKPHSSVI 333
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
FQG+L+V + + DQ ++ ++ ++ + SR FL+L LDLPP PL
Sbjct: 334 QHIFQGKLKVESQA---ITARADQVHDRLR--FEEATDVQSSVSR--FLLLTLDLPPAPL 386
Query: 365 FKDVMEKNIIPQL 377
F+D E+NIIPQ+
Sbjct: 387 FQDEQERNIIPQV 399
>gi|148666550|gb|EDK98966.1| ubiquitin specific peptidase 39, isoform CRA_b [Mus musculus]
Length = 604
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 369 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 412
>gi|312380834|gb|EFR26723.1| hypothetical protein AND_06979 [Anopheles darlingi]
Length = 593
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 199/327 (60%), Gaps = 49/327 (14%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
++ + + + CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAY
Sbjct: 126 RKQTITDRSKQCPYLDTINRHLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAY 185
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV--------------------- 192
THS+ HHV++NL T K YCLPD YEI D SL+DI++V
Sbjct: 186 THSVAESHHVFLNLSTLKFYCLPDNYEIIDSSLDDIKYVLDPVFTVRDIRHLDDEDVKQS 245
Query: 193 -------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------- 232
GLNNIK D+ NV +Q+L V P+R+FFL+ +NY + K P
Sbjct: 246 RTVDGTFYNPGVVGLNNIKANDYCNVILQALSHVKPIRDFFLMEKNYANIKRPPGDTAFT 305
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV RFG+L RK+W+ RNFK VSPHE LQAV+ S K+F+I Q +P+EF+SW L++LH
Sbjct: 306 LVQRFGELLRKLWNPRNFKAHVSPHEMLQAVVLWSNKQFQITKQGDPIEFLSWFLHSLHK 365
Query: 293 DLR-NTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
LR N + N+S++ F GE+++ +++P + + +D + + +T
Sbjct: 366 QLRGNRQPNSSVVNRSFLGEMKIYTRKLPPTELDDVQKQLLLATDEYQEKEETST----- 420
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQL 377
FL L DLP PLF D + +NIIPQ+
Sbjct: 421 -FLYLTCDLPATPLFIDELRENIIPQV 446
>gi|194220522|ref|XP_001916281.1| PREDICTED: LOW QUALITY PROTEIN: u4/U6.U5 tri-snRNP-associated
protein 2-like [Equus caballus]
Length = 565
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|325181123|emb|CCA15538.1| U4/U6.U5 trisnRNPassociated protein putative [Albugo laibachii
Nc14]
Length = 521
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/315 (44%), Positives = 193/315 (61%), Gaps = 45/315 (14%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
+ RR CPYLDT+N Q+LDFDFEK CS++LS+ NVYACLVCGKY++GRG+ +HA+THS++A
Sbjct: 19 KTRRKCPYLDTINTQLLDFDFEKICSITLSDQNVYACLVCGKYFKGRGKSTHAFTHSVQA 78
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIR----------------------------- 190
HHV+INL+ ++++CLPD YE+ D SL+ I+
Sbjct: 79 SHHVFINLQNDRIFCLPDNYEVVDQSLKPIKDALRPTFTEDMIRNLDQNQVLAQDAFGVS 138
Query: 191 ----HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC-KSPLVHRFGDLTRKIW 245
+GLNN+K TD+++V + +L + PLR+FFL+ N KS + RFG+L KIW
Sbjct: 139 YLPGFIGLNNLKRTDYISVVVHALAHIPPLRDFFLLTSNTNITHKSSFLLRFGELLCKIW 198
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSII 304
N K +SPHEF+Q V SK+RF IG Q +EFMSWLLN LH +L + T SII
Sbjct: 199 SPYNIKNTISPHEFVQEVSVKSKRRFHIGQQHECIEFMSWLLNELHRELCKRTNSKKSII 258
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT--TETSRMPFLMLGLDLPPP 362
ECFQG ++V + N+ T+ +H++ T+T + PFL L LDLP
Sbjct: 259 QECFQGFVDVT--------TTNESATKSSETEQKEHESSAPRTQTIKTPFLFLSLDLPTS 310
Query: 363 PLFKDVMEKNIIPQL 377
PLFKD N+IPQ+
Sbjct: 311 PLFKDSQGGNVIPQV 325
>gi|354487022|ref|XP_003505674.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Cricetulus
griseus]
gi|344237085|gb|EGV93188.1| U4/U6.U5 tri-snRNP-associated protein 2 [Cricetulus griseus]
Length = 564
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 369 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 412
>gi|410955235|ref|XP_003984262.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Felis
catus]
Length = 488
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|302694755|ref|XP_003037056.1| hypothetical protein SCHCODRAFT_80616 [Schizophyllum commune H4-8]
gi|300110753|gb|EFJ02154.1| hypothetical protein SCHCODRAFT_80616 [Schizophyllum commune H4-8]
Length = 532
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 204/356 (57%), Gaps = 64/356 (17%)
Query: 63 AKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEK 122
AKV +N D E DEDE A + EV+ YLDT+NR VLDFDFEK
Sbjct: 22 AKVTENVN---GDHESDDEDEPIQAESVPE-------EVKASDLYLDTINRAVLDFDFEK 71
Query: 123 FCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIN 182
CSVSLS++NVY CLVCGKY+QGRG KS+AY HS+ HHV+INL T KVY LPDGY ++
Sbjct: 72 VCSVSLSDINVYGCLVCGKYFQGRGPKSYAYAHSIHEDHHVFINLETTKVYVLPDGYPVS 131
Query: 183 DPSLEDIR------------------------------------HVGLNNIKETDFVNVT 206
DPSLEDI ++GLNNIK D +NV
Sbjct: 132 DPSLEDIAFVLAPSFTPQGVKALSSPAVLAKQSFDLGHKPYIPGYIGLNNIKHNDHMNVI 191
Query: 207 IQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
I SL+ V PL ++ L+ + ++ LV RF L +KIW+ R FK QVSPHEFLQ V +A
Sbjct: 192 IHSLLHVPPLMDYLLLSKP-NGKQTELVRRFAALAKKIWNPRLFKSQVSPHEFLQEVNRA 250
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEVVKEIPKNTISG 325
S +FR+ + +PVEF+ WLLN LH DL TKK N+S+I+ FQGEL +
Sbjct: 251 SGGKFRLEQKGDPVEFIGWLLNRLHKDLGGTKKRNSSVIFSTFQGELRL----------- 299
Query: 326 NDQNTEKGSDGGDDHDNI-----TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ 376
Q D G++ + +T+ PFL L +DLP PPLF+D +EKNIIPQ
Sbjct: 300 ETQQVLVRPDAGENAKPVFDLDRDIKTTVSPFLFLAVDLPAPPLFQDSVEKNIIPQ 355
>gi|149590362|ref|XP_001518784.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Ornithorhynchus
anatinus]
Length = 529
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/365 (44%), Positives = 206/365 (56%), Gaps = 69/365 (18%)
Query: 55 YGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQ 114
+G RG R G D ED+ RSR CPYLDT+NR
Sbjct: 40 HGSRGGGVCACAARVRHGRLDSEDR---------------RSR------HCPYLDTINRS 78
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEK CS+SLS++NVYACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YC
Sbjct: 79 VLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQCSHHVFLNLHTLKFYC 138
Query: 175 LPDGYEINDPSLEDIRHV---------------------------------GLNNIKETD 201
LPD YEI D SLEDI +V GLNNIK D
Sbjct: 139 LPDNYEIIDSSLEDITYVLKPTFTKQQIGNLDKQAKLSRAYDGTTYLPGIVGLNNIKAND 198
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQV 254
+ N +Q+L V PLRN+FL ENY++ K P LV RFG+L RK+W+ RNFK V
Sbjct: 199 YANAVLQALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHV 258
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELE 313
SPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK +I+ + FQG +
Sbjct: 259 SPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMR 318
Query: 314 V-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
+ K++P + ++ + D++ E++ F+ L LDLP PL+KD E+
Sbjct: 319 IFTKKLPHPDLPAEEK---EHLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQL 372
Query: 373 IIPQL 377
IIPQ+
Sbjct: 373 IIPQV 377
>gi|426223527|ref|XP_004005926.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Ovis
aries]
Length = 565
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|426223529|ref|XP_004005927.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Ovis
aries]
Length = 488
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|155372015|ref|NP_001094615.1| U4/U6.U5 tri-snRNP-associated protein 2 [Bos taurus]
gi|151556079|gb|AAI50036.1| USP39 protein [Bos taurus]
gi|296482482|tpg|DAA24597.1| TPA: ubiquitin specific protease 39 [Bos taurus]
Length = 565
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|26337039|dbj|BAC32203.1| unnamed protein product [Mus musculus]
Length = 564
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 369 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 412
>gi|432102466|gb|ELK30043.1| U4/U6.U5 tri-snRNP-associated protein 2 [Myotis davidii]
Length = 608
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 72 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 127
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 128 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 187
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 188 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 247
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 248 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 307
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 308 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 367
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 368 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 411
>gi|410955233|ref|XP_003984261.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Felis
catus]
Length = 565
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|402891448|ref|XP_003908958.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Papio
anubis]
Length = 565
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|20070404|ref|NP_613058.1| U4/U6.U5 tri-snRNP-associated protein 2 [Mus musculus]
gi|88909656|sp|Q3TIX9.2|SNUT2_MOUSE RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39
gi|12845893|dbj|BAB26944.1| unnamed protein product [Mus musculus]
gi|12858383|dbj|BAB31299.1| unnamed protein product [Mus musculus]
gi|20071704|gb|AAH26983.1| Ubiquitin specific peptidase 39 [Mus musculus]
gi|26353338|dbj|BAC40299.1| unnamed protein product [Mus musculus]
gi|74226993|dbj|BAE38302.1| unnamed protein product [Mus musculus]
gi|148666549|gb|EDK98965.1| ubiquitin specific peptidase 39, isoform CRA_a [Mus musculus]
Length = 564
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 369 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 412
>gi|74198469|dbj|BAE39717.1| unnamed protein product [Mus musculus]
Length = 564
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 369 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 412
>gi|351709928|gb|EHB12847.1| U4/U6.U5 tri-snRNP-associated protein 2 [Heterocephalus glaber]
Length = 565
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|403303110|ref|XP_003942187.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 488
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREIDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|114578552|ref|XP_515591.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 4 [Pan
troglodytes]
gi|410217786|gb|JAA06112.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410292746|gb|JAA24973.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410338569|gb|JAA38231.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410338571|gb|JAA38232.1| ubiquitin specific peptidase 39 [Pan troglodytes]
Length = 565
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|56550051|ref|NP_006581.2| U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Homo sapiens]
gi|376319199|ref|NP_001243654.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Homo sapiens]
gi|88909655|sp|Q53GS9.2|SNUT2_HUMAN RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39; AltName:
Full=SAD1 homolog; AltName: Full=U4/U6.U5
tri-snRNP-associated 65 kDa protein; Short=65K
gi|45595659|gb|AAH67273.1| USP39 protein [Homo sapiens]
gi|119619896|gb|EAW99490.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|119619898|gb|EAW99492.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|119619899|gb|EAW99493.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|158259925|dbj|BAF82140.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|403303108|ref|XP_003942186.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 565
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREIDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|402891450|ref|XP_003908959.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Papio
anubis]
Length = 488
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|350582197|ref|XP_003354795.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Sus scrofa]
Length = 431
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/373 (43%), Positives = 213/373 (57%), Gaps = 59/373 (15%)
Query: 52 EEEYGGRGDSGAKVGQNGRTGEDDDEDKD---EDEDDLANGY--GQGQRSRLVEVRRDCP 106
E E ++ A V R + D D+D E E NG + QRSR CP
Sbjct: 53 EVEPASAREAPAPVIPAVRVKRERDVDEDSEPEREVRAKNGRLDSEDQRSR------HCP 106
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HHV++N
Sbjct: 107 YLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLN 166
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T K YCLPD YEI D SLEDI +V G
Sbjct: 167 LHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVG 226
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWH 246
LNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+W+
Sbjct: 227 LNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWN 286
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIY 305
RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK +I+
Sbjct: 287 PRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVT 346
Query: 306 ECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ FQG + + K++P + ++ + D++ E++ F+ L LDLP PL
Sbjct: 347 DVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLPTAPL 400
Query: 365 FKDVMEKNIIPQL 377
+KD E+ IIPQ+
Sbjct: 401 YKDEKEQLIIPQV 413
>gi|389751280|gb|EIM92353.1| spindle pole body protein [Stereum hirsutum FP-91666 SS1]
Length = 515
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 191/310 (61%), Gaps = 48/310 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDFEK CSV SN+N+Y CLVCGKY+QGRG+ S+AY HS+ HHV+IN
Sbjct: 65 YLDTINRAILDFDFEKVCSVCSSNINIYGCLVCGKYFQGRGRNSYAYAHSIHDDHHVFIN 124
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY ++DPSLEDI
Sbjct: 125 LETTKVYVLPDGYLVSDPSLEDISFVLSPTFTPATVSTLSSPQHLSKPSYDLTSKPYFPG 184
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLN+IK D++NV I SL+ V PLR+ L+ + +S + RF L++K+W+ R F
Sbjct: 185 YIGLNDIKRNDYMNVIIHSLLHVAPLRDHLLL-SRFDGKQSEFLKRFASLSKKVWNPRLF 243
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQ 309
K QVSPHEFLQ V ++S +FR+ Q +PVEF+ W+LN LH D+ T KKN+SII+ FQ
Sbjct: 244 KSQVSPHEFLQEVGRSSGGKFRLETQGDPVEFLGWMLNHLHKDMGGTKKKNSSIIFSSFQ 303
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE--TSRMPFLMLGLDLPPPPLFKD 367
GE V+ + + D T G H +I E T+ PFL L +DLPPPPLF+D
Sbjct: 304 GE---VRMETQQVVVRPDAAT-----GARPHFDIDREIKTAASPFLFLAVDLPPPPLFQD 355
Query: 368 VMEKNIIPQL 377
+EKNIIPQ+
Sbjct: 356 AVEKNIIPQV 365
>gi|37231483|gb|AAH01384.2| USP39 protein, partial [Homo sapiens]
Length = 562
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 71 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 126
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 127 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 186
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 187 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 246
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 247 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 306
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 307 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 366
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 367 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 410
>gi|332813584|ref|XP_003309127.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
Length = 488
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|387762647|ref|NP_001248624.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
gi|380808926|gb|AFE76338.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
gi|383415281|gb|AFH30854.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
Length = 565
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|376319201|ref|NP_001243655.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Homo sapiens]
gi|119619900|gb|EAW99494.1| ubiquitin specific peptidase 39, isoform CRA_c [Homo sapiens]
Length = 488
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|344297576|ref|XP_003420473.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Loxodonta
africana]
Length = 565
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 204/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY+ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKTIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|57098329|ref|XP_532977.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Canis
lupus familiaris]
Length = 561
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 70 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 125
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 126 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 185
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 186 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 245
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 246 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 305
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 306 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 365
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 366 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 409
>gi|431899736|gb|ELK07687.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pteropus alecto]
Length = 646
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 KEQLLHN---DEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|296223374|ref|XP_002757592.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Callithrix jacchus]
Length = 565
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|164429365|ref|XP_958766.2| hypothetical protein NCU09547 [Neurospora crassa OR74A]
gi|38566856|emb|CAE76162.1| related to snRNP-associated protein [Neurospora crassa]
gi|157073452|gb|EAA29530.2| hypothetical protein NCU09547 [Neurospora crassa OR74A]
Length = 560
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 216/349 (61%), Gaps = 55/349 (15%)
Query: 72 GEDD-DEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKF 123
GE++ +E KDE++DDL G ++ +R+ P YLDT++R VLDFDFEK
Sbjct: 60 GENNSNEVKDEEDDDLEAGEEVEVKA---PIRQAAPTEGYDDLYLDTIDRNVLDFDFEKL 116
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 183
CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ GHHVYIN+ T+KVY LP+GYE+
Sbjct: 117 CSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEGHHVYINMSTQKVYVLPEGYEVKS 176
Query: 184 PSLEDIRHV---------------------------------GLNNIKETDFVNVTIQSL 210
SL+DI++V G+NNIK+ D++NV +Q+L
Sbjct: 177 KSLDDIKYVSDPRYTRQEVLDLDRKPHVSRTLLGKEYVPGFVGMNNIKDNDYLNVIVQAL 236
Query: 211 MRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
V+PLRNFFL+ E++ + LV R L RKIW+ R FK VSPHE LQ + S K+
Sbjct: 237 SHVSPLRNFFLL-EDFSNAPE-LVKRTSILFRKIWNPRAFKSHVSPHELLQEISLRSNKK 294
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQ 328
F + QS+PVEF+SW LN LH L TK ++S+I FQG+L+V + + DQ
Sbjct: 295 FTLTQQSDPVEFLSWFLNHLHLGLGGSKTKPHSSVIQHIFQGKLKVESQA---ITARADQ 351
Query: 329 NTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
++ ++ ++ + SR FL+L LDLPP PLF+D E+NIIPQ+
Sbjct: 352 VHDRLR--FEEAADVQSSVSR--FLLLTLDLPPAPLFQDEQERNIIPQV 396
>gi|281342281|gb|EFB17865.1| hypothetical protein PANDA_011952 [Ailuropoda melanoleuca]
Length = 551
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 158/347 (45%), Positives = 204/347 (58%), Gaps = 53/347 (15%)
Query: 74 DDDEDKD-EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
D DED + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS++N
Sbjct: 77 DADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLSHIN 132
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 133 AYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Query: 193 ---------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNF 219
GLNNIK D+ N +Q+L V PLRN+
Sbjct: 193 LKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNY 252
Query: 220 FLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 272
FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+
Sbjct: 253 FLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQ 312
Query: 273 IGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNT 330
I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++
Sbjct: 313 ITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK-- 370
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 371 -EQLLQNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|324506430|gb|ADY42746.1| U4/U6.U5 tri-snRNP-associated protein 2 [Ascaris suum]
Length = 727
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 151/334 (45%), Positives = 199/334 (59%), Gaps = 64/334 (19%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+R+++ + R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+QGRG +HAY
Sbjct: 238 KRAQIEKPSRQCPYLDTIDRGALDFDFEKLCSVSLSHVNVYACMVCGKYFQGRGTNTHAY 297
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------- 191
THSL+ H VY+NL T K YCLPD YEI DPSL+DI++
Sbjct: 298 THSLDTNHRVYLNLETLKFYCLPDNYEIIDPSLDDIKYVLKPTYTTDYIKNIDKAAKMSR 357
Query: 192 -----------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------L 233
VGLNNIK D+ NV + +L V PLRN+FL ENY K P L
Sbjct: 358 AFDDTTYYPGIVGLNNIKANDYENVILHALSHVPPLRNYFLREENYAGIKRPPGDKLSLL 417
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
RFG+L RK+W+ + FK VSPHE LQA + S+++F+I Q + EF+++LLNTLH
Sbjct: 418 PKRFGELIRKLWNPKAFKAHVSPHEMLQASVLCSERKFQITKQGDASEFLNFLLNTLHIA 477
Query: 294 LRNTKK-NTSIIYECFQGELE--VVKEIPKNT-------ISGNDQNTEKGSDGGDDHDNI 343
L TKK ++SI+Y F+G + K +P T +S +DQ EK D
Sbjct: 478 LNGTKKTSSSIVYRIFRGRMHEYTRKVMPVETTEEERRVLSESDQYQEKMKD-------- 529
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+PFL L LDLP PL++D + +NIIPQ+
Sbjct: 530 ------LPFLYLTLDLPAAPLYRDELMQNIIPQV 557
>gi|301774987|ref|XP_002922905.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Ailuropoda
melanoleuca]
Length = 565
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/347 (45%), Positives = 204/347 (58%), Gaps = 53/347 (15%)
Query: 74 DDDEDKD-EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
D DED + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS++N
Sbjct: 77 DADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLSHIN 132
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 133 AYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Query: 193 ---------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNF 219
GLNNIK D+ N +Q+L V PLRN+
Sbjct: 193 LKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNY 252
Query: 220 FLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 272
FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+
Sbjct: 253 FLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQ 312
Query: 273 IGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNT 330
I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++
Sbjct: 313 ITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK-- 370
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 371 -EQLLQNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|348566421|ref|XP_003469000.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Cavia
porcellus]
Length = 565
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 205/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|380480497|emb|CCF42398.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum higginsianum]
Length = 535
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 189/311 (60%), Gaps = 55/311 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ HHV+IN
Sbjct: 83 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDENHHVFIN 142
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
++T+KVY LP+GYE+N SL+DI+ V
Sbjct: 143 MQTQKVYVLPEGYEVNSKSLDDIKFVSDPRYTRQEVAALDKPPLRASFTLVGKEYAPGFV 202
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G+NN+KE D++NV +Q+L V PLRNF L+ + +S L RFG L RKIW+ R FK
Sbjct: 203 GMNNLKENDYLNVVVQALAHVVPLRNFCLLED--LSSRSELAKRFGILVRKIWNPRAFKA 260
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQG 310
VSPHE LQ + S KR+ + QS+PVEF+SW LN LH L TK +S++ FQG
Sbjct: 261 HVSPHELLQEISLLSNKRYTLTAQSDPVEFLSWFLNNLHLGLGGSKTKAGSSVVQRIFQG 320
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
+L+V Q +D GD + ++ TSR F+ L LDLP PLF+
Sbjct: 321 KLKV-----------ESQAITARADAGDRLRFEDAAVSVTTSR--FMFLTLDLPAAPLFQ 367
Query: 367 DVMEKNIIPQL 377
D +EKNIIPQ+
Sbjct: 368 DELEKNIIPQV 378
>gi|157819503|ref|NP_001100067.1| U4/U6.U5 tri-snRNP-associated protein 2 [Rattus norvegicus]
gi|149036402|gb|EDL91020.1| ubiquitin specific protease 39 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 568
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 204/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ E+ + + + T F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 369 K--EQLLHNEEYQETMVEST----FMYLTLDLPTAPLYKDEKEQLIIPQV 412
>gi|291386409|ref|XP_002709714.1| PREDICTED: ubiquitin specific protease 39 [Oryctolagus cuniculus]
Length = 565
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/347 (45%), Positives = 204/347 (58%), Gaps = 53/347 (15%)
Query: 74 DDDEDKD-EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
D DED + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS++N
Sbjct: 77 DADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLSHIN 132
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 133 AYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV 192
Query: 193 ---------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNF 219
GLNNIK D+ N +Q+L V PLRN+
Sbjct: 193 LKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNY 252
Query: 220 FLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 272
FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+
Sbjct: 253 FLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQ 312
Query: 273 IGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNT 330
I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++
Sbjct: 313 ITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK-- 370
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 371 -EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|301605952|ref|XP_002932588.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 501
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 190/328 (57%), Gaps = 63/328 (19%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 39 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 98
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD Y I D SLEDI +V
Sbjct: 99 VFLNLHTLKFYCLPDNYNIIDSSLEDITYVLKPTFTKQQIGNLDKQAKLSRAYDGTTYLP 158
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL ENY K P LV RFG+L R
Sbjct: 159 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYCDIKRPPGDIMFLLVQRFGELMR 218
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN L+S L KK +
Sbjct: 219 KLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALNSALGGNKKKKT 278
Query: 303 IIYECFQGELEV-VKEIP--------KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFL 353
I+ + FQG + + K++P K + N++ EK + PF+
Sbjct: 279 IVTDVFQGSMRIFTKKLPHPDLPSEEKEQLMQNEEYQEKMLES--------------PFM 324
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQLQRLS 381
L LDLP PL+KD E+ IIPQ+ S
Sbjct: 325 YLTLDLPTAPLYKDEKEQLIIPQVPLFS 352
>gi|149036403|gb|EDL91021.1| ubiquitin specific protease 39 (predicted), isoform CRA_b [Rattus
norvegicus]
gi|183986109|gb|AAI66516.1| Usp39 protein [Rattus norvegicus]
Length = 564
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 204/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDLPAEE 368
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ E+ + + + T F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 369 K--EQLLHNEEYQETMVEST----FMYLTLDLPTAPLYKDEKEQLIIPQV 412
>gi|13926071|gb|AAK49524.1|AF353989_1 U4/U6.U5 tri-snRNP-associated 65 kDa protein [Homo sapiens]
Length = 565
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 204/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP P +KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPFYKDEKEQLIIPQV 413
>gi|358392285|gb|EHK41689.1| hypothetical protein TRIATDRAFT_32182 [Trichoderma atroviride IMI
206040]
Length = 546
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 228/398 (57%), Gaps = 65/398 (16%)
Query: 21 KVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKD 80
++++ +SPS R + PLAN++D+ E+ G G+NG ED + D+
Sbjct: 12 ELLDIASPSSKRSRMGDFDSPLANSHDEAQSLEQDGE--------GRNG-DAEDANSDEF 62
Query: 81 EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCG 140
+DE+D A+ QR + D YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG
Sbjct: 63 DDEEDDASPMVAPQRQKGPADGYDDLYLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCG 122
Query: 141 KYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--------- 191
KY+QGRG KSHAY HSL+ HHV+INL T+KVY LPDGYE+ SL+DI++
Sbjct: 123 KYFQGRGVKSHAYFHSLDEDHHVFINLETQKVYVLPDGYEVKSKSLDDIKYVSDPRYTKN 182
Query: 192 -------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
VG+NNIKE D++NV +Q+L V+PLRN+ L+ +
Sbjct: 183 EVIQLDRRANHVSWTLDGKQYTPGFVGINNIKENDYLNVVVQALSHVSPLRNYLLLEDFS 242
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
+ KS +V R L RKIW+ R FK VSPHE LQ + S KRF + QS+PVEF+SW
Sbjct: 243 K--KSEIVKRCSILFRKIWNPRAFKSHVSPHELLQEIALLSNKRFTLTNQSDPVEFLSWF 300
Query: 287 LNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD-----D 339
LN LH L TK +S+I FQG+L+V Q +D GD +
Sbjct: 301 LNNLHLGLGGSKTKPGSSMIQRTFQGKLKV-----------ESQAITARADAGDRLRFEE 349
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + R FL L LDLP PLF+D +EKNIIPQ+
Sbjct: 350 AGEVKVDIVR--FLFLTLDLPSAPLFQDELEKNIIPQV 385
>gi|315045442|ref|XP_003172096.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arthroderma gypseum CBS
118893]
gi|311342482|gb|EFR01685.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arthroderma gypseum CBS
118893]
Length = 602
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 218/410 (53%), Gaps = 77/410 (18%)
Query: 23 VEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRG----DSGAKVGQNGR--TGEDDD 76
VE SP+ R + P+ T D E+ + G G D G GE
Sbjct: 14 VEIDSPASKRPKIYSSEEPIDTTTLTDRTEQRWNGNGHDLNDDTPTTDNRGENEAGEIAA 73
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLS 129
E+ D +EDD +R VR++ P YLDT+ R LDFDFEK CSVSLS
Sbjct: 74 EESDLEEDD----------TRHRTVRQNAPLEGYDDLYLDTIQRGALDFDFEKLCSVSLS 123
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
N+NVYACLVCGKYYQGRG KSHAY H+LE HHV+IN+ T+KVY LP+GYE+ + SL+DI
Sbjct: 124 NINVYACLVCGKYYQGRGPKSHAYFHALEVEHHVFINMETKKVYVLPEGYEVKNKSLDDI 183
Query: 190 RH---------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
++ VG+NNIK D++NV +Q L V P+
Sbjct: 184 KYVVDPHFSKEEVAKLDKTVIDAFDLLGKRYRPGFVGMNNIKSNDYLNVIVQLLAHVRPI 243
Query: 217 RNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
RNFFL+ ++ +P L RFG L RK+W+ R FK VSPHE LQ V S KRF +
Sbjct: 244 RNFFLL-HDFPALSTPQLPLRFGMLVRKLWNPRAFKAHVSPHELLQEVAIRSSKRFTLTK 302
Query: 276 QSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQGELEVVKEIPKNTISGNDQNTE 331
QS+P+EF+SW LN LH L +K K TS+I F G+L + Q
Sbjct: 303 QSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRI-----------ESQAIT 351
Query: 332 KGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
SD + ++ TT + PFLML LDLPP PLF+ + +IIPQ+
Sbjct: 352 ARSDSANARLVFSESSTTTSQVNPFLMLTLDLPPTPLFQSSNKDSIIPQV 401
>gi|62897263|dbj|BAD96572.1| ubiquitin specific protease 39 variant [Homo sapiens]
Length = 565
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 204/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N Y CLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYVCLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|327304351|ref|XP_003236867.1| snRNP assembly factor [Trichophyton rubrum CBS 118892]
gi|326459865|gb|EGD85318.1| snRNP assembly factor [Trichophyton rubrum CBS 118892]
Length = 605
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/415 (40%), Positives = 222/415 (53%), Gaps = 67/415 (16%)
Query: 13 EDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYD-DDDEEEEYGGRGDSGAKVGQNGRT 71
EDR + V++ +S P E P +T D E+ + G G + +
Sbjct: 8 EDRLDEPVQIDSPASKRPKIYSTEEPTDATTHTRSLTDRTEQRWNGNGHNLNEETATDEG 67
Query: 72 GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFC 124
G+ + D ++ DL + SR VR++ P YLDT+ R LDFDFEK C
Sbjct: 68 GKKETRDASAEDSDL-----EEYDSRHPTVRQNAPLEGYDDLYLDTIQRAALDFDFEKLC 122
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
SVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE HHV+IN+ T+KVY LP+GYE+ +
Sbjct: 123 SVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEHHVFINMETKKVYVLPEGYEVKNK 182
Query: 185 SLEDIRH---------------------------------VGLNNIKETDFVNVTIQSLM 211
SL+DI++ VG+NNIK D++NV +Q L
Sbjct: 183 SLDDIKYVVDPHFSKEEVAKLDKTVIDAFDLSGKRYRPGFVGMNNIKSNDYLNVIVQLLA 242
Query: 212 RVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
V P+RNFFL+ ++ +P L RFG L RK+W+ R FK VSPHE LQ V S KR
Sbjct: 243 HVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNPRAFKAHVSPHELLQEVAIRSSKR 301
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQGELEVVKEIPKNTISGN 326
F + QS+P+EF+SW LN LH L +K K TS+I F G+L +
Sbjct: 302 FTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRI-----------E 350
Query: 327 DQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
Q SD + ++ TT + PFLML LDLPP PLF+ + +IIPQ+
Sbjct: 351 SQAITARSDSANARLVFSESSTTTSQVNPFLMLTLDLPPTPLFQSSNKDSIIPQV 405
>gi|393218241|gb|EJD03729.1| spindle pole body protein [Fomitiporia mediterranea MF3/22]
Length = 536
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 192/312 (61%), Gaps = 44/312 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR LDFDFEK CSV LSN+N+Y CLVCGKY+QGRG+ S+AY HS+ HHV+IN
Sbjct: 74 YLDTVNRAALDFDFEKVCSVCLSNINIYGCLVCGKYFQGRGRNSYAYAHSIHDDHHVFIN 133
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T+KVY LPDGY ++DPSLEDI
Sbjct: 134 LDTKKVYVLPDGYIVSDPSLEDISFVLAPSFTPQSIASLSSPSHLTKLSYDLSNKPYLPG 193
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
+VGLNNIK D +NV I +L + PLR++ L+ + +S L+ RF L +K+W+ R F
Sbjct: 194 YVGLNNIKRHDHMNVIILALTHIPPLRDYLLL-SAFGGKESELLKRFAGLAKKLWNPRLF 252
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQ 309
K QVSPHEFLQ V +AS +FR+ Q +P EF+ WLLN LH D+ + KKN+SIIY FQ
Sbjct: 253 KNQVSPHEFLQEVGRASTGKFRLEEQGDPTEFLGWLLNRLHKDMGGSKKKNSSIIYSTFQ 312
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
GEL + E + + +++ + D T+T+ PFL L +DLPPPPLF+D +
Sbjct: 313 GELRM--ETQQVIVKPEGESSHRPQFDIDRE----TKTTTSPFLFLSVDLPPPPLFQDSV 366
Query: 370 EKNIIPQLQRLS 381
EKNIIPQ+ S
Sbjct: 367 EKNIIPQVSLAS 378
>gi|326482051|gb|EGE06061.1| snRNP assembly factor [Trichophyton equinum CBS 127.97]
Length = 604
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/378 (42%), Positives = 208/378 (55%), Gaps = 66/378 (17%)
Query: 49 DDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-- 106
D E+ + G G + + GE + D +E DL + +R VR++ P
Sbjct: 44 DRTEQRWNGNGHNLNEETATDEGGEKETRDTAAEESDL-----EEDDNRHRTVRQNAPLE 98
Query: 107 -----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
YLDT+ R LDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE H
Sbjct: 99 GYDDLYLDTIQRAALDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEH 158
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
HV+IN+ T+KVY LP+GYE+ + SL+DI++
Sbjct: 159 HVFINMETKKVYVLPEGYEVKNKSLDDIKYVVDPHFSKEEVAKLDKAVIDAFDLSGKRYR 218
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHA 247
VG+NNIK D++NV +Q L V P+RNFFL+ ++ +P L RFG L RK+W+
Sbjct: 219 PGFVGMNNIKSNDYLNVIVQLLAHVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNP 277
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSI 303
R FK VSPHE LQ V S KRF + QS+P+EF+SW LN LH L +K K TS+
Sbjct: 278 RAFKAHVSPHELLQEVAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSV 337
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDL 359
I F G+L + Q SD + ++ TT + PFLML LDL
Sbjct: 338 IQSAFHGKLRI-----------ESQAITARSDSANARLVFSESSTTTSQVNPFLMLTLDL 386
Query: 360 PPPPLFKDVMEKNIIPQL 377
PP PLF+ + +IIPQ+
Sbjct: 387 PPTPLFQSSNKDSIIPQV 404
>gi|340522343|gb|EGR52576.1| predicted protein [Trichoderma reesei QM6a]
Length = 554
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/311 (48%), Positives = 188/311 (60%), Gaps = 53/311 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY HSL+ HHV+IN
Sbjct: 91 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYYQGRGVKSHAYFHSLDEDHHVFIN 150
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH----------------------------------- 191
L T+KVY LP+GYE+ SL+DI++
Sbjct: 151 LETQKVYVLPEGYEVKSKSLDDIKYVSDPRYTKEEVIQLDRRRPNAVSWTLDGKEYTPGF 210
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VG+NNIKE D++NV +Q+L V+PLRN+FL+ + + KS LV R L RKIW+ R FK
Sbjct: 211 VGMNNIKENDYLNVVVQALSHVSPLRNYFLLEDFSK--KSELVKRCSILFRKIWNPRAFK 268
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L TK +S+I FQ
Sbjct: 269 AHVSPHELLQEVALQSNKRFTLTHQSDPVEFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQ 328
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDD---HDNITTETSRMPFLMLGLDLPPPPLFK 366
G+L+V Q +D GD + + + FL+L LDLP PLF+
Sbjct: 329 GKLKV-----------ESQAITARADAGDRLRFEEAAEVKVDVVRFLLLTLDLPSAPLFQ 377
Query: 367 DVMEKNIIPQL 377
D +EKNIIPQ+
Sbjct: 378 DELEKNIIPQV 388
>gi|326472703|gb|EGD96712.1| snRNP assembly factor [Trichophyton tonsurans CBS 112818]
Length = 604
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/378 (42%), Positives = 208/378 (55%), Gaps = 66/378 (17%)
Query: 49 DDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-- 106
D E+ + G G + + GE + D +E DL + +R VR++ P
Sbjct: 44 DRTEQRWNGNGHNLNEETATDEGGEKETRDTAAEESDL-----EEDDNRHRTVRQNAPLE 98
Query: 107 -----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
YLDT+ R LDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE H
Sbjct: 99 GYDDLYLDTIQRAALDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEH 158
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
HV+IN+ T+KVY LP+GYE+ + SL+DI++
Sbjct: 159 HVFINMETKKVYVLPEGYEVKNKSLDDIKYVVDPHFSKEEVAKLDKAVIDAFDLSGKRYR 218
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHA 247
VG+NNIK D++NV +Q L V P+RNFFL+ ++ +P L RFG L RK+W+
Sbjct: 219 PGFVGMNNIKSNDYLNVIVQLLAHVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNP 277
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSI 303
R FK VSPHE LQ V S KRF + QS+P+EF+SW LN LH L +K K TS+
Sbjct: 278 RAFKAHVSPHELLQEVAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSV 337
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDL 359
I F G+L + Q SD + ++ TT + PFLML LDL
Sbjct: 338 IQSAFHGKLRI-----------ESQAITARSDSANARLVFSESSTTTSQVNPFLMLTLDL 386
Query: 360 PPPPLFKDVMEKNIIPQL 377
PP PLF+ + +IIPQ+
Sbjct: 387 PPTPLFQSSNKDSIIPQV 404
>gi|312073962|ref|XP_003139756.1| ubiquitin specific peptidase 39 [Loa loa]
Length = 692
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 198/327 (60%), Gaps = 50/327 (15%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+++++ + R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+QGRG +HAY
Sbjct: 206 KKAQIEKPSRQCPYLDTIDRCALDFDFEKLCSVSLSHINVYACMVCGKYFQGRGTSTHAY 265
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------- 191
THSL+ H V++NL T K YCLPD YEI DPSL+DI++
Sbjct: 266 THSLDTNHRVFLNLSTLKFYCLPDNYEIIDPSLDDIKYVLKPTYTTKYIMEIDKMGKMAR 325
Query: 192 -----------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------L 233
VGLNNIK D+ NV + +L V PLR++FL ENY + K P L
Sbjct: 326 AFDGTTYHPGVVGLNNIKANDYENVVLHALSHVPPLRDYFLREENYINIKRPPGDKLTLL 385
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
RFG+L RK+W+ + FK VSPHE LQA + S K+F+I Q + EF+++LLNTLH
Sbjct: 386 PKRFGELIRKLWNPKAFKAHVSPHEMLQASVLCSSKKFQITKQGDAAEFLNFLLNTLHIA 445
Query: 294 LRNTKK-NTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L T+K ++SIIY+ F+G L K IP T TE+ + D + +
Sbjct: 446 LNGTRKTSSSIIYKIFRGRLHEFTRKVIPVET-------TEEARKNLLETDEYKEKKLEI 498
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQL 377
PFL L LDLP PL++D + +NIIPQ+
Sbjct: 499 PFLYLTLDLPAAPLYRDELLQNIIPQV 525
>gi|393907486|gb|EFO24316.2| ubiquitin specific peptidase 39 [Loa loa]
Length = 698
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 198/327 (60%), Gaps = 50/327 (15%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+++++ + R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+QGRG +HAY
Sbjct: 212 KKAQIEKPSRQCPYLDTIDRCALDFDFEKLCSVSLSHINVYACMVCGKYFQGRGTSTHAY 271
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------- 191
THSL+ H V++NL T K YCLPD YEI DPSL+DI++
Sbjct: 272 THSLDTNHRVFLNLSTLKFYCLPDNYEIIDPSLDDIKYVLKPTYTTKYIMEIDKMGKMAR 331
Query: 192 -----------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------L 233
VGLNNIK D+ NV + +L V PLR++FL ENY + K P L
Sbjct: 332 AFDGTTYHPGVVGLNNIKANDYENVVLHALSHVPPLRDYFLREENYINIKRPPGDKLTLL 391
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
RFG+L RK+W+ + FK VSPHE LQA + S K+F+I Q + EF+++LLNTLH
Sbjct: 392 PKRFGELIRKLWNPKAFKAHVSPHEMLQASVLCSSKKFQITKQGDAAEFLNFLLNTLHIA 451
Query: 294 LRNTKK-NTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L T+K ++SIIY+ F+G L K IP T TE+ + D + +
Sbjct: 452 LNGTRKTSSSIIYKIFRGRLHEFTRKVIPVET-------TEEARKNLLETDEYKEKKLEI 504
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQL 377
PFL L LDLP PL++D + +NIIPQ+
Sbjct: 505 PFLYLTLDLPAAPLYRDELLQNIIPQV 531
>gi|242808710|ref|XP_002485221.1| snRNP assembly factor, putative [Talaromyces stipitatus ATCC 10500]
gi|218715846|gb|EED15268.1| snRNP assembly factor, putative [Talaromyces stipitatus ATCC 10500]
Length = 616
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/343 (45%), Positives = 199/343 (58%), Gaps = 55/343 (16%)
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
E + D+DD ++S+ VE D YLDT+NR VLDFDFEK CSVSLSN+NVYAC
Sbjct: 71 ESPEADDDDETLLAAPQRQSQPVEGYGDL-YLDTINRAVLDFDFEKLCSVSLSNINVYAC 129
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------ 190
LVCGKY+QGRG KS+AY H+LE GHHV++N+ T+KVY LP+GYE+ SL+DI+
Sbjct: 130 LVCGKYFQGRGNKSYAYFHALEIGHHVFVNMETKKVYVLPEGYEVKSKSLDDIKYVVDPT 189
Query: 191 ---------------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
+VG+NNIK D++NV +Q L VTP+RNFFL+
Sbjct: 190 FTKNDVLKLDKEVRDAWDLQGKKYRPGYVGMNNIKANDYLNVVVQVLAHVTPIRNFFLL- 248
Query: 224 ENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
+N+ SP L RF L RK+W+ + FK VSPHE LQ + S KRF + QS+PVEF
Sbjct: 249 QNFPVPGSPQLSVRFSTLVRKLWNPKAFKSHVSPHELLQEIALRSSKRFTLTHQSDPVEF 308
Query: 283 MSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD 338
+SW LN LH L +KK TS+I + FQG L + Q SD +
Sbjct: 309 LSWFLNNLHLSLGGSKKPSKTPTSVIQQAFQGHLRI-----------ESQAITAHSDTTN 357
Query: 339 DHDNIT----TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
T T T PFL+L LDLPP PLF+ ++IIPQ+
Sbjct: 358 SRLVFTESSQTNTQTSPFLILTLDLPPTPLFQSANRESIIPQV 400
>gi|302501618|ref|XP_003012801.1| hypothetical protein ARB_01052 [Arthroderma benhamiae CBS 112371]
gi|291176361|gb|EFE32161.1| hypothetical protein ARB_01052 [Arthroderma benhamiae CBS 112371]
Length = 604
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 159/378 (42%), Positives = 208/378 (55%), Gaps = 66/378 (17%)
Query: 49 DDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-- 106
D E+ + G G + + GE + D +E DL + +R VR++ P
Sbjct: 44 DRTEQRWNGNGHNLNEETATYEGGEKETRDTTAEESDL-----EEDDNRHRTVRQNAPLE 98
Query: 107 -----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
YLDT+ R LDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE H
Sbjct: 99 GYDDLYLDTIQRAALDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEH 158
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
HV+IN+ T+KVY LP+GYE+ + SL+DI++
Sbjct: 159 HVFINMETKKVYVLPEGYEVKNKSLDDIKYVVDPHFSKEEVAKLDKTVIDAFDLSGKRYR 218
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHA 247
VG+NNIK D++NV +Q L V P+RNFFL+ ++ +P L RFG L RK+W+
Sbjct: 219 PGFVGMNNIKSNDYLNVIVQLLAHVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNP 277
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSI 303
R FK VSPHE LQ V S KRF + QS+P+EF+SW LN LH L +K K TS+
Sbjct: 278 RAFKAHVSPHELLQEVAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSV 337
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDL 359
I F G+L + Q SD + ++ TT + PFLML LDL
Sbjct: 338 IQSAFHGKLRI-----------ESQAITARSDSANARLVFSESSTTTSQVNPFLMLTLDL 386
Query: 360 PPPPLFKDVMEKNIIPQL 377
PP PLF+ + +IIPQ+
Sbjct: 387 PPTPLFQSSNKDSIIPQV 404
>gi|429859841|gb|ELA34603.1| u4 tri-snrnp-associated protein 2 [Colletotrichum gloeosporioides
Nara gc5]
Length = 551
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/309 (46%), Positives = 185/309 (59%), Gaps = 51/309 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ HHV+IN
Sbjct: 96 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDENHHVFIN 155
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
++T+KVY LP+GYE+ SL+DI+ V
Sbjct: 156 MQTQKVYVLPEGYEVKSKSLDDIKFVSDPRYTKQEVAALDRTPLRASFTLAGKEYAPGFV 215
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G+NN+KE D++NV +Q+L V PLRNF L+ + +S L RFG L RKIW+ R FK
Sbjct: 216 GMNNLKENDYLNVIVQALSHVAPLRNFCLLED--LSSRSELAKRFGILVRKIWNPRAFKA 273
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQG 310
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L TK +S++ FQG
Sbjct: 274 HVSPHELLQEISLLSSKRFTLTAQSDPVEFLSWFLNNLHLGLGGSKTKPGSSVVQRIFQG 333
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGD--DHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
+L+V Q +D GD ++ + F+ L LDLP PLF+D
Sbjct: 334 KLKV-----------ESQAITARADAGDRLRFEDAAVSVTSTRFMFLTLDLPAAPLFQDE 382
Query: 369 MEKNIIPQL 377
+EKNIIPQ+
Sbjct: 383 LEKNIIPQV 391
>gi|407921556|gb|EKG14698.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 558
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/362 (43%), Positives = 207/362 (57%), Gaps = 53/362 (14%)
Query: 51 EEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDT 110
E+E+ G D+ +V GE D+ +DED+ + Q + E D YLDT
Sbjct: 54 EDEQNPGIEDAAEEVH-----GELDEAGAIDDEDEPMVSVPKRQEAP-TEGYNDL-YLDT 106
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
++R+VLDFDFEK CSV+LSN+NVYACLVCGKYYQGRG KS AY H+L+ GHHVYINL T+
Sbjct: 107 IDRKVLDFDFEKLCSVTLSNINVYACLVCGKYYQGRGPKSQAYFHALDEGHHVYINLETK 166
Query: 171 KVYCLPDGYEINDPSLEDIR---------------------------------HVGLNNI 197
KVY LP+GYE+ SLEDI+ VG+NNI
Sbjct: 167 KVYVLPEGYEVKSKSLEDIKFVADPKYSKEEVMKLDKEQKTAWDLVGRKYIPGFVGMNNI 226
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
K D+ NV I +L VTPLRNFF++ + + L RF L RKIW+ R FK VSPH
Sbjct: 227 KANDYFNVAIHALAHVTPLRNFFMLED--LSSRPQLAQRFSTLVRKIWNPRAFKSHVSPH 284
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVV 315
E LQ + S KRF + QS+PV+F+ W LN LH L +K +SI+ FQG L++
Sbjct: 285 ELLQEIALRSSKRFTLTEQSDPVDFLQWFLNNLHLSLGGSKSKPGSSIVQRVFQGSLKIE 344
Query: 316 KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIP 375
++ D+ + SD ++ + F++L LDLPP P+F+D +EKNIIP
Sbjct: 345 SQLITARADAADRLRFEDSD---------VQSEKTHFMILTLDLPPRPVFQDELEKNIIP 395
Query: 376 QL 377
Q+
Sbjct: 396 QV 397
>gi|310794303|gb|EFQ29764.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
M1.001]
Length = 535
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 55/311 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ HHV+IN
Sbjct: 83 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDENHHVFIN 142
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
++T+KVY LP+GYE+ SL+DI+ V
Sbjct: 143 MQTQKVYVLPEGYEVKSKSLDDIKFVSDPRYTKQEVAVLDKPPMRASFTLAGKEYAPGFV 202
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G+NN+KE D++NV +Q+L V PLRNF L+ + +S L RFG L RKIW+ R FK
Sbjct: 203 GMNNLKENDYLNVVVQALAHVAPLRNFCLLED--LSSRSELAKRFGILVRKIWNPRAFKA 260
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQG 310
VSPHE LQ + S KR+ + QS+PVEF+SW LN LH L TK +S++ FQG
Sbjct: 261 HVSPHELLQEISLLSNKRYTLTAQSDPVEFLSWFLNNLHLGLGGSKTKPGSSVVQRIFQG 320
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
+L+V Q +D GD + ++ TSR F+ L LDLP PLF+
Sbjct: 321 KLKV-----------ESQAITARADAGDRLRFEDAAVSMTTSR--FMFLTLDLPAAPLFQ 367
Query: 367 DVMEKNIIPQL 377
D +EKNIIPQ+
Sbjct: 368 DELEKNIIPQV 378
>gi|169601432|ref|XP_001794138.1| hypothetical protein SNOG_03581 [Phaeosphaeria nodorum SN15]
gi|111067666|gb|EAT88786.1| hypothetical protein SNOG_03581 [Phaeosphaeria nodorum SN15]
Length = 560
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 194/336 (57%), Gaps = 54/336 (16%)
Query: 81 EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCG 140
+DEDD +R E YLDT+NR+VLDFDFEK CSV+LSN+NVYACLVCG
Sbjct: 76 DDEDDNEPAIAAPKRQTAPEAGYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYACLVCG 135
Query: 141 KYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR---------- 190
KYYQGRG KS AY H+LE GHHVY+N+ T+KV+ LP+GYE+ SL+D++
Sbjct: 136 KYYQGRGPKSQAYFHALEEGHHVYVNMETKKVFVLPEGYEVQSKSLDDLKFVVDPRMSKA 195
Query: 191 -----------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR 227
VG+NNIK D+ NV IQ+L V PLRN+F++ +
Sbjct: 196 EVARLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFMLED--L 253
Query: 228 HCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
+ + RF L RKIW+ R FK VSPHE LQ V S KRF + Q++PV+F+SW L
Sbjct: 254 SSRPQIAQRFSTLVRKIWNPRAFKTHVSPHELLQEVALRSSKRFNLTDQADPVDFISWFL 313
Query: 288 NTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----DHD 341
N LH + TK +SI+ + FQG L++ Q +D GD +
Sbjct: 314 NHLHLAVGGSKTKPGSSIVQKVFQGSLKI-----------ESQEITARADAGDRLRFEDA 362
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ TE S+ FL+L LDLP PLF+D +EKNIIPQ+
Sbjct: 363 AVKTEISK--FLVLTLDLPAAPLFQDALEKNIIPQV 396
>gi|197097880|ref|NP_001126415.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pongo abelii]
gi|75054842|sp|Q5R761.1|SNUT2_PONAB RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39
gi|55731370|emb|CAH92399.1| hypothetical protein [Pongo abelii]
Length = 565
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 204/350 (58%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+S S
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISPS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HVNAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+V GLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|121706833|ref|XP_001271643.1| snRNP assembly factor, putative [Aspergillus clavatus NRRL 1]
gi|119399791|gb|EAW10217.1| snRNP assembly factor, putative [Aspergillus clavatus NRRL 1]
Length = 614
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 200/346 (57%), Gaps = 56/346 (16%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
D E D D+D A + Q S +E D YLDT+NRQ+LDFDFEK CS++LSN+NV
Sbjct: 80 DVAESSDVDDDRPAIAAPKRQ-SEPMEGYSDL-YLDTINRQILDFDFEKQCSITLSNINV 137
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-- 191
YACLVCGKY+QGRG KSHAY H+LE GHHV+IN+ T+KVY LP+GYE+ + SLEDI++
Sbjct: 138 YACLVCGKYFQGRGPKSHAYFHALEVGHHVFINMSTKKVYVLPEGYEVKNKSLEDIKYVV 197
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
VG+NNIK D++NV +Q L V P+RN+F
Sbjct: 198 DPHYTKEEVSKLDKQVQDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQLLAHVFPVRNYF 257
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ E L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PV
Sbjct: 258 LLHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPV 317
Query: 281 EFMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TE 331
EF+SW LN LH L +KK TS+I+ FQG L + E T + QN TE
Sbjct: 318 EFLSWFLNNLHLSLGGSKKPTATPTSVIHAAFQGHLRI--ESQAITAHSDTQNARLVFTE 375
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
G T + + PFL+L LDLPP PLF+ ++IIPQ+
Sbjct: 376 SG----------TINSQKTPFLILTLDLPPTPLFQSANRESIIPQV 411
>gi|332239223|ref|XP_003268806.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Nomascus leucogenys]
Length = 487
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 149/317 (47%), Positives = 193/317 (60%), Gaps = 48/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 84
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 85 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 144
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 145 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 204
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 205 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 264
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 265 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 318
Query: 361 PPPLFKDVMEKNIIPQL 377
PL+KD E+ IIPQ+
Sbjct: 319 TAPLYKDEKEQLIIPQV 335
>gi|376319203|ref|NP_001243656.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 3 [Homo sapiens]
gi|114578548|ref|XP_001167639.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Pan
troglodytes]
Length = 487
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/317 (47%), Positives = 193/317 (60%), Gaps = 48/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 84
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 85 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 144
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 145 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 204
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 205 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 264
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 265 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 318
Query: 361 PPPLFKDVMEKNIIPQL 377
PL+KD E+ IIPQ+
Sbjct: 319 TAPLYKDEKEQLIIPQV 335
>gi|440909376|gb|ELR59288.1| U4/U6.U5 tri-snRNP-associated protein 2, partial [Bos grunniens
mutus]
Length = 476
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/317 (47%), Positives = 193/317 (60%), Gaps = 48/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 14 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 73
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 74 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 133
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 134 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 193
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 194 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 253
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 254 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 307
Query: 361 PPPLFKDVMEKNIIPQL 377
PL+KD E+ IIPQ+
Sbjct: 308 TAPLYKDEKEQLIIPQV 324
>gi|397491429|ref|XP_003816666.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan paniscus]
Length = 545
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 200/350 (57%), Gaps = 72/350 (20%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RH---------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
+ VGLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP-------- 361
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
H +++T F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 362 ------------HPDLST------FMYLTLDLPTAPLYKDEKEQLIIPQV 393
>gi|268530552|ref|XP_002630402.1| Hypothetical protein CBG04341 [Caenorhabditis briggsae]
Length = 626
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/340 (44%), Positives = 196/340 (57%), Gaps = 50/340 (14%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
D+D DE + Q ++ R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+
Sbjct: 135 DEDGDEPVWSMKKAQAEKKS-----RTCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACM 189
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------ 191
VCGKY+QGRG +HAYTH+LE HHV++NL+T K YCLPD YE+ DPSLEDI++
Sbjct: 190 VCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVVDPSLEDIKYVLKPTY 249
Query: 192 ---------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
VGLNNIK D+ NV + +L V PLRN+FL
Sbjct: 250 TKEMIGSIDKQARMVRAQDDSTYFPGVVGLNNIKANDYCNVILHALSAVRPLRNWFLKES 309
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
NY K P L RFG+L RK+W+ R + VSPHE LQAV+ S K+F+ Q+
Sbjct: 310 NYLAVKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSNKKFQFIKQN 369
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG 337
+ +FM +LL TLH+ L ++K SII + F+G + +E + I D EK
Sbjct: 370 DAYDFMLFLLTTLHAALNGSEKRESIISKTFRGRM---REYSRKVIPAEDTEEEKYRKMH 426
Query: 338 DDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + S PFL L LDLP PL++DV +NIIPQ+
Sbjct: 427 --LPDYQEKVSEKPFLFLTLDLPAAPLYRDVQLQNIIPQV 464
>gi|402592787|gb|EJW86714.1| U4/U6.U5 tri-snRNP-associated protein 2 [Wuchereria bancrofti]
Length = 690
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/327 (44%), Positives = 198/327 (60%), Gaps = 50/327 (15%)
Query: 94 QRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAY 153
+++++ + R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+QGRG +HAY
Sbjct: 219 KKAQIEKPSRQCPYLDTIDRCALDFDFEKLCSVSLSHINVYACMVCGKYFQGRGTSTHAY 278
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------- 191
THSL+ H V++NL T K YCLPD YEI DPSL+DI++
Sbjct: 279 THSLDTNHRVFLNLSTLKFYCLPDNYEIIDPSLDDIKYVLKPTYTTKYIMEIDKIGKMAR 338
Query: 192 -----------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------L 233
VGLNNIK D+ NV + +L V PLR++FL E+Y + K P L
Sbjct: 339 AFDGTTYHPGVVGLNNIKANDYENVVLHALSHVPPLRDYFLREESYINIKRPPGDKLTLL 398
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
RFG+L RK+W+ + FK VSPHE LQA + S K+F+I Q + EF+++LLNTLH
Sbjct: 399 PKRFGELIRKLWNPKAFKAHVSPHEMLQASVLCSNKKFQITRQGDAAEFLNFLLNTLHIA 458
Query: 294 LRNTKK-NTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L T+K ++SIIY+ F+G L K IP T TE+ + D + +
Sbjct: 459 LNGTRKTSSSIIYKIFRGRLHEFTRKVIPVET-------TEEARKTLLETDEYKEKKLEI 511
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQL 377
PFL L LDLP PL++D + +NIIPQ+
Sbjct: 512 PFLYLTLDLPAAPLYRDELLQNIIPQV 538
>gi|116206416|ref|XP_001229017.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183098|gb|EAQ90566.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 552
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/360 (45%), Positives = 208/360 (57%), Gaps = 60/360 (16%)
Query: 57 GRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVL 116
G +G G+ G T E DED+ E++ + R D YLDT++R VL
Sbjct: 42 GDEQNGTIGGEEGETDEFSDEDEVEEKAPI--------RQSAPTAGYDDLYLDTIDRNVL 93
Query: 117 DFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLP 176
DFDFEK CS++LSN+NVYACLVCGKY+QGRG KSHAY H+LE HHV+IN+ T+KVY LP
Sbjct: 94 DFDFEKLCSITLSNINVYACLVCGKYFQGRGPKSHAYFHALEEDHHVFINMSTQKVYVLP 153
Query: 177 DGYEINDPSLEDIRH---------------------------------VGLNNIKETDFV 203
+GYE+ SL+DI++ VG+NNIKE D++
Sbjct: 154 EGYEVTSKSLDDIKYVSDPRYTRQEVTELDRKPHTSWTLGGKEYAPGFVGMNNIKENDYL 213
Query: 204 NVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAV 263
NV +Q+L V PLRN+FL+ E++ LV R L RKIW+ R FK VSPHE LQ +
Sbjct: 214 NVVVQALSHVAPLRNYFLL-EDFTSAPE-LVKRTSILFRKIWNPRAFKSHVSPHELLQEI 271
Query: 264 MKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKN 321
S KRF + QS+PVEF+SW LN LH L TK +S I FQG+L+V E
Sbjct: 272 SLRSNKRFTLTAQSDPVEFLSWFLNHLHLGLGGSKTKPGSSPIQRIFQGKLKV--ESQSI 329
Query: 322 TISGNDQNT----EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
T G+ N E+ SD T+ +R FL+L LDLPP PLF+D E+NIIPQ+
Sbjct: 330 TARGDGLNDRLRFEEASDA-------KTDIAR--FLLLTLDLPPAPLFQDEQERNIIPQV 380
>gi|296805165|ref|XP_002843407.1| ubiquitin C-terminal hydrolase Ubp10 [Arthroderma otae CBS 113480]
gi|238844709|gb|EEQ34371.1| ubiquitin C-terminal hydrolase Ubp10 [Arthroderma otae CBS 113480]
Length = 604
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 208/378 (55%), Gaps = 66/378 (17%)
Query: 49 DDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-- 106
D E+ + G G SG V E + ED D D + + +R +R++ P
Sbjct: 44 DRTEQRWDGNGQSGNGVSATAEQVEKEAEDTTADASDW-----EEEENRHQTIRQNAPLE 98
Query: 107 -----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
YLDT+ R LDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE H
Sbjct: 99 GYDDLYLDTIQRAALDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEH 158
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
HV+IN+ T+KVY LP+GYE+ + SL+DI++
Sbjct: 159 HVFINMETKKVYVLPEGYEVKNKSLDDIKYVVDPHFSKEEVAKLDKAVIDAFDLSGKRYR 218
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHA 247
VG+NNIK D++NV +Q L V P+RNFFL+ ++ +P L RFG L RK+W+
Sbjct: 219 PGFVGMNNIKSNDYLNVVVQLLAHVRPIRNFFLL-HDFPALNTPQLPLRFGMLVRKLWNP 277
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----RNTKKNTSI 303
R FK VSPHE LQ V S KRF + QS+P+EF+SW LN LH L + + K +S+
Sbjct: 278 RAFKAHVSPHELLQEVAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKQSSKPSSV 337
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDL 359
I F G+L + Q SD + ++ TT + PFL+L LDL
Sbjct: 338 IQSAFHGKLRI-----------ESQAITARSDSANARLVFSESSTTTSQINPFLILTLDL 386
Query: 360 PPPPLFKDVMEKNIIPQL 377
PP PLF+ + +IIPQ+
Sbjct: 387 PPTPLFQSSNKDSIIPQV 404
>gi|146186096|ref|XP_001470681.1| ubiquitin specific protease 39 and snrnp assembly factor
[Tetrahymena thermophila]
gi|146143168|gb|EDK31265.1| ubiquitin specific protease 39 and snrnp assembly factor
[Tetrahymena thermophila SB210]
Length = 529
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 212/369 (57%), Gaps = 66/369 (17%)
Query: 47 DDDDEEEEYGGRGDSGAKVGQNG-RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDC 105
DD+ +++E G +++ ++ T + DE+++E+ + N ++R++C
Sbjct: 52 DDNTKQQELGNDEILDSQLVKDAYNTQNEHDEEQNEEIQEKKN-----------DIRKEC 100
Query: 106 PYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYI 165
P++ T+ R +LDFDFEK CS+SL+NLNVYACL+CGKYYQGRG+ +HAY HSLE HH+YI
Sbjct: 101 PFIITIKRHLLDFDFEKLCSISLANLNVYACLICGKYYQGRGRNTHAYLHSLETNHHMYI 160
Query: 166 NLRTEKVYCLPDGYEINDPSLEDIRH---------------------------------V 192
NL KVYCLPD YE+ D SL DI++ V
Sbjct: 161 NLHNAKVYCLPDNYEVIDQSLNDIKYNLAPVYSDQQLANLDTMDTKSRALNGIYYQPGFV 220
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWHA 247
GLNNIK D+VNV IQ+L R+ LRN + + ++ K+ + RF +L +KIW+
Sbjct: 221 GLNNIKMNDYVNVIIQALCRIPVLRNQIIRFNNTVNQDVFDLKTLISKRFSNLVKKIWNP 280
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC 307
RNFKGQVSPHE LQA++ SKK+F I QS+P++ +SWLLN + S+L NT ++I EC
Sbjct: 281 RNFKGQVSPHELLQAIVLKSKKKFTINEQSDPIKLLSWLLNNIQSELSNTNY-KNLIDEC 339
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
F+GE+E+ P G E PF+ L L++PPPPL KD
Sbjct: 340 FKGEVEIHTYTPLQNQIGYSS---------------VPEIENKPFIYLTLNIPPPPLHKD 384
Query: 368 VMEKNIIPQ 376
+K IP+
Sbjct: 385 DHKKINIPE 393
>gi|406863087|gb|EKD16135.1| U4/U6.U5 tri-snRNP-associated protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 928
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/331 (45%), Positives = 197/331 (59%), Gaps = 66/331 (19%)
Query: 97 RLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQK 149
R VR++ P YLDT+NR VLDFDFEK CS+SLSN+NVYACLVCGKYYQGRG K
Sbjct: 448 RKAPVRQEAPMEGFDDLYLDTINRGVLDFDFEKLCSISLSNINVYACLVCGKYYQGRGPK 507
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------------------- 190
SHAY H+LE GHHVYIN++T+KVY LP+GYE+ + SL+DI+
Sbjct: 508 SHAYFHALEVGHHVYINMQTQKVYVLPEGYEVKNKSLDDIKFVSDPRYSKEEVMSLDRPG 567
Query: 191 ----------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-L 233
VG+NNIKE D+ NV +Q+L V PLRN+ L+ E++ K+P L
Sbjct: 568 AKDKAWALGGKEYSPGFVGMNNIKENDYFNVVVQALSHVPPLRNYLLL-EDF--SKAPEL 624
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V R L RKIW+ R FK VSPHE LQ + S K+F + QS+PV+F+SW LN LH
Sbjct: 625 VKRLSILVRKIWNPRAFKSHVSPHELLQEISLKSNKKFTLTTQSDPVDFLSWFLNNLHLA 684
Query: 294 L--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTE 346
L TK +S++ FQG+L+V Q +D GD + ++ T+
Sbjct: 685 LGGSKTKPGSSMVQRVFQGKLKV-----------ESQAITAKADAGDRLRFEEAASVQTD 733
Query: 347 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+R F+ L LDLP PLF+D ++ NIIPQ+
Sbjct: 734 VNR--FMFLTLDLPAAPLFQDELDANIIPQV 762
>gi|308495270|ref|XP_003109823.1| hypothetical protein CRE_06606 [Caenorhabditis remanei]
gi|308244660|gb|EFO88612.1| hypothetical protein CRE_06606 [Caenorhabditis remanei]
Length = 634
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 188/315 (59%), Gaps = 45/315 (14%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+VCGKY+QGRG +HAYTH+LE HH
Sbjct: 164 RTCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACMVCGKYFQGRGTNTHAYTHALETDHH 223
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
V++NL+T K YCLPD YE+ DPSLEDI++
Sbjct: 224 VFLNLQTLKFYCLPDNYEVVDPSLEDIKYVLKPTYTKEMIASIDKQARMVRAYDDSTYFP 283
Query: 192 --VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
VGLNNIK D+ NV + +L V PLRN+FL NY K P L RFG+L R
Sbjct: 284 GVVGLNNIKANDYCNVILHALSAVRPLRNWFLKESNYLAIKRPPGDKLTLLPQRFGELIR 343
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
K+W+ R + VSPHE LQAV+ S K+++ Q++ +FM +LL TLH+ L ++K S
Sbjct: 344 KLWNPRALRTHVSPHEMLQAVVVCSNKKYQFIKQNDAYDFMLFLLTTLHTALNGSEKRES 403
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
II + F+G++ +E + I D + EK + S PFL L LDLP
Sbjct: 404 IISKTFRGKM---REYSRKVIPAEDTDEEKYMKMR--MPDYQERVSEKPFLFLTLDLPAA 458
Query: 363 PLFKDVMEKNIIPQL 377
PL++DV +NIIPQ+
Sbjct: 459 PLYRDVQLQNIIPQV 473
>gi|403417071|emb|CCM03771.1| predicted protein [Fibroporia radiculosa]
Length = 556
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/347 (43%), Positives = 195/347 (56%), Gaps = 68/347 (19%)
Query: 92 QGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
+G R R R YLDT+NR VLDFDFEK CSVSLSN+N+Y CLVCGKY+QGRG+ S+
Sbjct: 51 RGPRRRAEPPRASDMYLDTINRAVLDFDFEKVCSVSLSNINIYGCLVCGKYFQGRGRNSY 110
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR--------------------- 190
AY H++ HHV+INL + KVY LPDGY ++DPSLEDI
Sbjct: 111 AYAHAIHEDHHVFINLESTKVYVLPDGYLVSDPSLEDISFVLAPSFTSASIEGLSSPSFI 170
Query: 191 ---------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVH 235
++GLN+IK D++NV I SL+ V PLR+ LI N+ +S L+
Sbjct: 171 QKPSYDLSSKPYIPGYIGLNDIKRNDYMNVIIHSLLHVQPLRDHLLI-SNFHGKESELLK 229
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
RF L +K+W+ R FK QVSPHEFLQ V +AS +F +G Q +PVEF+ WLLN LH D+
Sbjct: 230 RFASLAKKVWNPRLFKSQVSPHEFLQEVGRASAGKFSLGSQGDPVEFLGWLLNRLHKDMG 289
Query: 296 NTKKN-------------------------TSIIYECFQGELEVVKEIPKNTISGNDQNT 330
TKK T +I+ FQG++ + E + + + +
Sbjct: 290 GTKKKNSSTCSIYLAVLDSREPACAKDRVRTGVIFSTFQGQVRM--ETQQVVVRPDLGDN 347
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
EK D T PFL L +DLPPPPLF+D +EKNIIPQ+
Sbjct: 348 EKPRFDIDREIKSTVS----PFLFLAVDLPPPPLFQDAVEKNIIPQV 390
>gi|154279092|ref|XP_001540359.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412302|gb|EDN07689.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 616
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 182/306 (59%), Gaps = 46/306 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+L+ GHHV++N
Sbjct: 110 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALDVGHHVFVN 169
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------VGLNNIKE 199
+ T+KVY LP+GYE+ SL+DI++ VG+NNIK
Sbjct: 170 METKKVYVLPEGYEVKSRSLDDIKYVVDPQYKKEEVAKLDKAVIDAWDLAGFVGMNNIKS 229
Query: 200 TDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEF 259
D++NV +Q L V P+RNFFL+ + L RFG L RK+W+ R FK VSPHE
Sbjct: 230 NDYLNVIVQVLSHVRPIRNFFLLHQFPMPGTPQLPLRFGILVRKLWNPRAFKSHVSPHEL 289
Query: 260 LQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVV 315
LQ V S KRF + QS+PV+F+SW LN LH L +KK TS+I+ FQG L +
Sbjct: 290 LQEVALRSSKRFTLTQQSDPVDFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAFQGHLRI- 348
Query: 316 KEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
Q SD + ++ T + PFL+L LDLPP PLF+ +
Sbjct: 349 ----------ESQAITARSDAANARLVFSESSETTSQTTPFLILTLDLPPTPLFQSTNAE 398
Query: 372 NIIPQL 377
+IIPQ+
Sbjct: 399 SIIPQI 404
>gi|17533009|ref|NP_494298.1| Protein USP-39 [Caenorhabditis elegans]
gi|351061315|emb|CCD69090.1| Protein USP-39 [Caenorhabditis elegans]
Length = 602
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 196/339 (57%), Gaps = 50/339 (14%)
Query: 80 DEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 139
DE +DD + Q + R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+VC
Sbjct: 114 DEHDDDPVWSMKKAQAEK---KSRMCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACMVC 170
Query: 140 GKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------- 191
GKY+QGRG +HAYTH+LE HHV++NL+T K YCLPD YE+ DPSLEDI++
Sbjct: 171 GKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVIDPSLEDIKYVLKPTYTK 230
Query: 192 -------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
VGLNNIK D+ N +Q+L V PLRN+FL NY
Sbjct: 231 EMIASIDKQSKMVRAYDDSTYFPGVVGLNNIKANDYCNAILQALSAVRPLRNWFLKESNY 290
Query: 227 RHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
K P L RFG+L RK+W+ R + VSPHE LQAV+ S K+F+ Q++
Sbjct: 291 TSIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSNKKFQFIKQNDA 350
Query: 280 VEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD-GGD 338
+FM +LL TLHS L T K SII + F+G + ++ + I D + EK
Sbjct: 351 ADFMLFLLTTLHSALNGTDKKPSIISKTFRGRM---RQYSRRVIPAEDTDEEKYMKLRMP 407
Query: 339 DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
++ E+ PFL L LDLP PL++DV +NIIPQ+
Sbjct: 408 EYQEKVIES---PFLYLTLDLPSAPLYRDVQLQNIIPQV 443
>gi|302662702|ref|XP_003023002.1| hypothetical protein TRV_02823 [Trichophyton verrucosum HKI 0517]
gi|291186978|gb|EFE42384.1| hypothetical protein TRV_02823 [Trichophyton verrucosum HKI 0517]
Length = 604
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 209/375 (55%), Gaps = 60/375 (16%)
Query: 49 DDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-- 106
D E+ + G G + + GE + D +E DL + +R VR+ P
Sbjct: 44 DRTEQRWNGNGHNLNEETATYEGGEKETRDTTAEESDL-----EEDDNRHRTVRQSAPLE 98
Query: 107 -----YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
YLDT+ R LDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+LE H
Sbjct: 99 GYDDLYLDTIQRAALDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALEVEH 158
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
HV+IN+ T+KVY LP+GYE+ + SL+DI++
Sbjct: 159 HVFINMETKKVYVLPEGYEVKNKSLDDIKYVVDPHFSKEEVAKLDKTVIDAFDLSGKRYR 218
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHA 247
VG+NNIK D++NV +Q L V P+RNFFL+ ++ +P L RFG L RK+W+
Sbjct: 219 PGFVGMNNIKSNDYLNVIVQLLAHVRPIRNFFLL-HDFPALSTPQLPLRFGVLVRKLWNP 277
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSI 303
R FK VSPHE LQ V S KRF + QS+P+EF+SW LN LH L +K K TS+
Sbjct: 278 RAFKAHVSPHELLQEVAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSV 337
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
I F G+L + + I + S N + S T++ +R FLML LDLPP
Sbjct: 338 IQSAFHGKLRIESQAITARSDSANARLVFSES------STTTSQVNR--FLMLTLDLPPT 389
Query: 363 PLFKDVMEKNIIPQL 377
PLF+ + +IIPQ+
Sbjct: 390 PLFQSSNKDSIIPQV 404
>gi|367024425|ref|XP_003661497.1| hypothetical protein MYCTH_2300970 [Myceliophthora thermophila ATCC
42464]
gi|347008765|gb|AEO56252.1| hypothetical protein MYCTH_2300970 [Myceliophthora thermophila ATCC
42464]
Length = 557
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 206/345 (59%), Gaps = 55/345 (15%)
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLS 129
+D + D D+ + + + +R+ P YLDT++R VLDFDFEK CSV+LS
Sbjct: 56 QDGNGDADEFSEEEEEEEVEEKAPIRQSAPTAGYDDLYLDTIDRNVLDFDFEKLCSVTLS 115
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
N+NVYACLVCGKYYQGRG KSHAY H+L+ HHV+IN+ T+KVY LP+GYE+ SL+DI
Sbjct: 116 NINVYACLVCGKYYQGRGPKSHAYFHALDEDHHVFINMSTQKVYVLPEGYEVKSKSLDDI 175
Query: 190 RH---------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
++ VG+NNIKE D++NV +Q+L V PL
Sbjct: 176 KYVSDPRYTRQEVAEFDRKPRTSLTLAGKEYTPGFVGMNNIKENDYLNVVVQALSHVAPL 235
Query: 217 RNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
RNFFL+ E++ LV R L RKIW+ R FK VSPHE LQ V S KRF + Q
Sbjct: 236 RNFFLL-EDFSSAPE-LVKRTSILFRKIWNPRAFKAHVSPHELLQEVSLRSNKRFTLTAQ 293
Query: 277 SNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQ-NTEK 332
S+PV+F+SW LN LH L TK +S I FQG+L+V + I T + +D+ E+
Sbjct: 294 SDPVDFLSWFLNNLHLGLGGSKTKPGSSPIQRIFQGKLKVESQAITARTDTHDDRLRFEE 353
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
S+ I T+ +R FL+L LDLPP PLF+D ++NIIPQ+
Sbjct: 354 ASE-------IKTDIAR--FLLLTLDLPPAPLFQDEEQRNIIPQV 389
>gi|392870120|gb|EAS27281.2| snRNP assembly factor [Coccidioides immitis RS]
Length = 606
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 185/312 (59%), Gaps = 52/312 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSLE GHHV++N
Sbjct: 99 YLDTIHRSNLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLEVGHHVFVN 158
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ + SL+DI++V G
Sbjct: 159 METKKVYVLPEGYEVKNKSLDDIKYVIDPSYVKEEVARLDTVVTEAWDLAGKKYRPGYVG 218
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ L RFG L RK+W+ + FK
Sbjct: 219 MNNIKSNDYLNVIVQLLAHVRPIRNFFLLHRFPVPGTPQLPLRFGMLVRKLWNPKAFKCH 278
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS+++ FQ
Sbjct: 279 VSPHELLQEIALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSRTPTSVVHSAFQ 338
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ TT + R PFL+L LDLPP PLF
Sbjct: 339 GHLRI-----------ESQAITARSDAANARLVFSESSTTTSQRTPFLILTLDLPPTPLF 387
Query: 366 KDVMEKNIIPQL 377
+ E++IIPQ+
Sbjct: 388 QAADEESIIPQV 399
>gi|389634977|ref|XP_003715141.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae 70-15]
gi|351647474|gb|EHA55334.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae 70-15]
gi|440475631|gb|ELQ44300.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae Y34]
gi|440480835|gb|ELQ61476.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae P131]
Length = 563
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 145/309 (46%), Positives = 191/309 (61%), Gaps = 48/309 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTV+R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+L+ HHV+IN
Sbjct: 103 YLDTVDRNVLDFDFEKLCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALDENHHVFIN 162
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH----------------------------------- 191
++T+KVY LP+GYE+ SL+D+++
Sbjct: 163 MQTQKVYVLPEGYEVRSSSLDDVKYVSDPRYTRDEVARLDRPGKAPMARTLAGKEYAPGF 222
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VG+NNIKE D++NV +Q+L V PLRNFFL+ E+ +S LV R L RKIW+ R FK
Sbjct: 223 VGMNNIKENDYLNVVVQALAHVPPLRNFFLL-EDLSQSQSELVRRTATLFRKIWNPRAFK 281
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L TK +S++ FQ
Sbjct: 282 AHVSPHELLQEVSLRSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSRTKPGSSMVQRVFQ 341
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFK-DV 368
G+++V + +D+ + ++ + + SR FL+L LDLPP PLF+ D
Sbjct: 342 GKVKVESQAITAKADADDRLRFEDAE-------VKVDVSR--FLLLTLDLPPAPLFQDDD 392
Query: 369 MEKNIIPQL 377
E++IIPQ+
Sbjct: 393 EERSIIPQV 401
>gi|221043956|dbj|BAH13655.1| unnamed protein product [Homo sapiens]
Length = 487
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 148/317 (46%), Positives = 192/317 (60%), Gaps = 48/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 84
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 85 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 144
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 145 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 204
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN HS L KK
Sbjct: 205 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNAPHSALGGTKKKKK 264
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 265 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 318
Query: 361 PPPLFKDVMEKNIIPQL 377
PL+KD E+ IIPQ+
Sbjct: 319 TAPLYKDEKEQLIIPQV 335
>gi|259482726|tpe|CBF77479.1| TPA: snRNP assembly factor, putative (AFU_orthologue; AFUA_4G07520)
[Aspergillus nidulans FGSC A4]
Length = 616
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 145/313 (46%), Positives = 191/313 (61%), Gaps = 54/313 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KS+AY H+LE HHV+IN
Sbjct: 111 YLDTINRHILDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSYAYFHALEVSHHVFIN 170
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ + SL+DI++ VG
Sbjct: 171 MGTKKVYVLPEGYEVKNKSLDDIKYVVDPYYTKDEVAKLDKVVTDAFDLSGRRYRPGFVG 230
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV Q+L V P+RN+FL+ E + LV RFG L RK+W+ + F+
Sbjct: 231 MNNIKANDYLNVVAQALAHVLPIRNYFLLHEFPQPGTPQLVLRFGTLVRKLWNPKAFRSH 290
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----RNTKKNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L + +K TS+++ FQ
Sbjct: 291 VSPHELLQEVALRSSKRFTLTQQSDPVEFLSWFLNNLHLALGGSRKPSKTPTSVVHAAFQ 350
Query: 310 GELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
G L + E T + QN TE G+ I ++T+ PFL+L LDLPP PL
Sbjct: 351 GHLRI--ESQAITAHSDTQNARLVFTESGT--------INSQTT--PFLILTLDLPPTPL 398
Query: 365 FKDVMEKNIIPQL 377
F+ ++IIPQ+
Sbjct: 399 FQSANRESIIPQV 411
>gi|303314851|ref|XP_003067434.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240107102|gb|EER25289.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320037789|gb|EFW19726.1| snRNP assembly factor [Coccidioides posadasii str. Silveira]
Length = 606
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 185/312 (59%), Gaps = 52/312 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSLE GHHV++N
Sbjct: 99 YLDTIHRSNLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLEIGHHVFVN 158
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ + SL+DI++V G
Sbjct: 159 METKKVYVLPEGYEVKNKSLDDIKYVIDPSYVKEEVARLDTVVTEAWDLAGKKYRPGYVG 218
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ L RFG L RK+W+ + FK
Sbjct: 219 MNNIKSNDYLNVIVQLLAHVRPIRNFFLLHRFPVPGTPQLPLRFGMLVRKLWNPKAFKCH 278
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS+++ FQ
Sbjct: 279 VSPHELLQEIALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSPTPTSVVHSAFQ 338
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ TT + R PFL+L LDLPP PLF
Sbjct: 339 GHLRI-----------ESQAITARSDAANARLVFSESSTTTSQRTPFLILTLDLPPTPLF 387
Query: 366 KDVMEKNIIPQL 377
+ E++IIPQ+
Sbjct: 388 QAADEESIIPQV 399
>gi|119175368|ref|XP_001239925.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 787
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 185/312 (59%), Gaps = 52/312 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSLE GHHV++N
Sbjct: 280 YLDTIHRSNLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLEVGHHVFVN 339
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ + SL+DI++V G
Sbjct: 340 METKKVYVLPEGYEVKNKSLDDIKYVIDPSYVKEEVARLDTVVTEAWDLAGKKYRPGYVG 399
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ L RFG L RK+W+ + FK
Sbjct: 400 MNNIKSNDYLNVIVQLLAHVRPIRNFFLLHRFPVPGTPQLPLRFGMLVRKLWNPKAFKCH 459
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS+++ FQ
Sbjct: 460 VSPHELLQEIALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSRTPTSVVHSAFQ 519
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ TT + R PFL+L LDLPP PLF
Sbjct: 520 GHLRI-----------ESQAITARSDAANARLVFSESSTTTSQRTPFLILTLDLPPTPLF 568
Query: 366 KDVMEKNIIPQL 377
+ E++IIPQ+
Sbjct: 569 QAADEESIIPQV 580
>gi|405963740|gb|EKC29293.1| U4/U6.U5 tri-snRNP-associated protein 2 [Crassostrea gigas]
Length = 658
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 176/275 (64%), Gaps = 41/275 (14%)
Query: 81 EDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCG 140
E E +A+ + + V+ R CPYLDT+NR VLDFDFEK CSVSLS++NVYACLVCG
Sbjct: 151 ESEPKVADAGAEAVQDPKVDRSRSCPYLDTINRSVLDFDFEKLCSVSLSHINVYACLVCG 210
Query: 141 KYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-------- 192
KY+QGRG+ SHAYTHS+ HHV++NL T+K YCLPD Y+I D SL+DI +V
Sbjct: 211 KYFQGRGKLSHAYTHSVLDSHHVFLNLLTQKFYCLPDNYQIIDSSLDDIIYVLNPTFSNE 270
Query: 193 -------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR 227
GLNNIKE D+ NV +Q+L VTPLRNFFL +NY+
Sbjct: 271 HIASLDSSSKLSRAYDGTTYLPGIVGLNNIKENDYCNVILQALSHVTPLRNFFLQEDNYK 330
Query: 228 HCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
K P V RFG+L RK+W+ RNFK VSPHE LQAV+ SKK+F+I Q + +
Sbjct: 331 KIKRPPGDQMFLTVQRFGELLRKLWNPRNFKAHVSPHEMLQAVVLCSKKKFQITEQGDAL 390
Query: 281 EFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEV 314
EFMSW LN LH + TKK N++I+ + F+G++ V
Sbjct: 391 EFMSWFLNALHLAMNGTKKLNSTIVNKTFRGKMRV 425
>gi|393238227|gb|EJD45765.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 602
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 185/312 (59%), Gaps = 43/312 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR LDFDFEK CSV LSN+++Y CLVCGKY+QGRG+ S+AY HS+ HHV+IN
Sbjct: 128 YLDTVNRNALDFDFEKLCSVCLSNIHIYGCLVCGKYFQGRGKSSYAYAHSVHEDHHVFIN 187
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------- 192
L T KVY LPDGY ++DPSL+DI HV
Sbjct: 188 LETGKVYVLPDGYLVSDPSLDDIGHVLNPRFTPQSIKYLSSPVHLQTPSYDLSRKPYIPG 247
Query: 193 --GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
GLNNIK D +NV I +L+ V PLR+F L+ + + LV RF L +K+W+ R F
Sbjct: 248 FVGLNNIKRNDHLNVVIHALLHVAPLRDFLLLSQFDGGKQPELVKRFAALAKKLWNPRLF 307
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQ 309
K QVSPHEFLQ V++ S+ RFRI +P EF+ WLLN LH D+ +KK N+SIIY FQ
Sbjct: 308 KAQVSPHEFLQEVVRVSQGRFRITELGDPAEFLGWLLNRLHIDMGGSKKRNSSIIYRTFQ 367
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
GEL + + + N D +I T+ PFL L LDLP PPLF+D
Sbjct: 368 GELRLETQ----QVKVNKDLFGVARPQFDIDRDIKKTTT--PFLWLALDLPAPPLFQDGE 421
Query: 370 EKNIIPQLQRLS 381
+KNI+PQ+ S
Sbjct: 422 DKNIVPQVTLAS 433
>gi|193785486|dbj|BAG50852.1| unnamed protein product [Homo sapiens]
Length = 488
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 202/350 (57%), Gaps = 52/350 (14%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RH---------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
+ VGLNNIK D+ N +Q+L V PL
Sbjct: 190 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 249
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV R G+ RK+W+ RNFK SPHE LQAV+ SKK
Sbjct: 250 RNYFLEEDNYKNIKRPPGDIMFLLVQRSGEPMRKLWNPRNFKAHASPHEMLQAVVLCSKK 309
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGND 327
F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + +
Sbjct: 310 TFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEE 369
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 370 K---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|256073829|ref|XP_002573230.1| family C19 non-peptidase homologue (C19 family) [Schistosoma
mansoni]
gi|360044721|emb|CCD82269.1| family C19 non-peptidase homologue (C19 family) [Schistosoma
mansoni]
Length = 577
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 198/350 (56%), Gaps = 56/350 (16%)
Query: 79 KDEDEDDLANGYGQGQRSRLVEVR-RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
++ DE+ + G G + + R R CPYLDT+ R +LDFDFEK CSVSLS+LNVYACL
Sbjct: 36 EESDEEQVYTGNGAVYNDQNEDTRSRSCPYLDTIRRNMLDFDFEKLCSVSLSHLNVYACL 95
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------ 191
+CGKY+QGRG +HAYTHS+ HHV++NL T + YCLPD YEI D SLEDI +
Sbjct: 96 ICGKYFQGRGNSTHAYTHSVSESHHVFLNLETRRFYCLPDDYEILDGSLEDITYLLNPTF 155
Query: 192 ---------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
VGLNNIK D+ NV +Q L ++PLRN+FL +
Sbjct: 156 STSEILTLDSYSKMVRAYNGLTYYPGVVGLNNIKANDYCNVILQMLSHISPLRNYFLDIK 215
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
N+ + S LV RF +L RK+W+ RNFK VSPHEFLQAV+ SKKRF+I Q
Sbjct: 216 NFENLPSVSGDQMMLLVQRFSELIRKLWNPRNFKTHVSPHEFLQAVVLCSKKRFQITEQG 275
Query: 278 NPVEFMSWLLNTLHSDLRN----------TKKNTSIIYECFQGELEVVKEIPKNTISGND 327
+ +EF+SWL+N + LR K SI+ +G++ + + + N
Sbjct: 276 DAIEFLSWLVNAIDKALRTKKIPCPKGAVNKTYKSIVSSTLRGKMRMYS---RKIMPVNM 332
Query: 328 QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ EK S D T S + F L DLPPPPL+ D ++NIIPQ+
Sbjct: 333 TDEEKASLA--DSPEYMTTVSDINFFYLTCDLPPPPLYLDEFKENIIPQV 380
>gi|358335317|dbj|GAA29316.2| U4/U6.U5 tri-snRNP-associated protein 2 [Clonorchis sinensis]
Length = 617
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 213/391 (54%), Gaps = 63/391 (16%)
Query: 39 LLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDK--DEDEDDLANGYGQGQRS 96
L+P T + +E+ G+ + + R +D++D+ + + + N G+ RS
Sbjct: 60 LVPFRWTAAAERQEQNRPGKLGRKPRSCVSIRESPEDEDDEVLEIKQGPVFNANGEDVRS 119
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHS 156
R CPYLDT++R +LDFDFEK CSVSLS+LNVYACLVCGKY+QGRG +HAYTHS
Sbjct: 120 R------SCPYLDTISRNMLDFDFEKLCSVSLSHLNVYACLVCGKYFQGRGTSTHAYTHS 173
Query: 157 LEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------- 191
+ GHHV++NL T + YCLPD YEI D SLEDI +
Sbjct: 174 VSEGHHVFLNLETHRFYCLPDDYEIIDGSLEDITYLLNPTFTSAEISSLDTNNRMVRAYN 233
Query: 192 --------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHR 236
VGLNNIK D+ NV +Q L V+PLR++FL NYR + LV R
Sbjct: 234 GLTYYQGVVGLNNIKANDYCNVILQMLAHVSPLRDYFLNAANYRGMSTTSSDQMHLLVQR 293
Query: 237 FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN 296
FG+L RK+W+ RNFK VSPHEFLQAV+ S+KRF+ Q + VEF+SWLLN L L
Sbjct: 294 FGELIRKLWNPRNFKTHVSPHEFLQAVVLCSRKRFQFTEQGDAVEFLSWLLNALDLALHR 353
Query: 297 TKKNT----------SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE 346
+ +T +++ +G + + + + N EK + D+
Sbjct: 354 KRLSTKPGPKATPERTVVSRALRGTMRIHS---RKIMPVNMSEEEKATLA--DNPEYMPS 408
Query: 347 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
T F L DLPPPPL+ D +++IIPQ+
Sbjct: 409 TVETKFFYLTCDLPPPPLYLDEYKESIIPQV 439
>gi|95007145|emb|CAJ20366.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
RH]
Length = 570
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 197/331 (59%), Gaps = 65/331 (19%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
++RR CPYL T+ R +LDFDFEK C + LSN +VYACLVC +Y+QGRG+ ++AY H+L+
Sbjct: 69 QLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNTYAYMHALQE 128
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
H+VY+NL+ +VYCLP+ YE+ D SL+DI +
Sbjct: 129 QHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYTKEDVAQLSTRIIYGKALDGAD 188
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-----ENYRHCKSPLVHRFGDLT 241
VGLNN+K TDF N IQSL V PLRN+ L+ +NY P++ G+L
Sbjct: 189 YIPGCVGLNNLKRTDFCNAMIQSLCTVVPLRNWLLLLDLSHVQNY----DPVLQTLGELM 244
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKI++ARNFKG VSPHEFLQAV ASKK+FRIG Q++P++F WL+ +H ++ K N+
Sbjct: 245 RKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAKHKKLNS 304
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+++ +CFQGE+EV T +G G SR+PFL L LDLP
Sbjct: 305 NVVNDCFQGEVEV------------RTTTAEGEATGQ-----PPSVSRVPFLFLTLDLPQ 347
Query: 362 PPLFKDVMEKNIIPQ------LQRLSGHMWQ 386
P+FKD +++N+IP LQ+ +G Q
Sbjct: 348 APIFKDSLDRNMIPHIPIFDLLQKFNGEQIQ 378
>gi|221482682|gb|EEE21020.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
GT1]
Length = 574
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 197/331 (59%), Gaps = 65/331 (19%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
++RR CPYL T+ R +LDFDFEK C + LSN +VYACLVC +Y+QGRG+ ++AY H+L+
Sbjct: 70 QLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNTYAYMHALQE 129
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
H+VY+NL+ +VYCLP+ YE+ D SL+DI +
Sbjct: 130 QHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYTKEDVAQLSTRIIYGKALDGAD 189
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-----ENYRHCKSPLVHRFGDLT 241
VGLNN+K TDF N IQSL V PLRN+ L+ +NY P++ G+L
Sbjct: 190 YIPGCVGLNNLKRTDFCNAMIQSLCTVVPLRNWLLLLDLSHVQNY----DPVLQTLGELM 245
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKI++ARNFKG VSPHEFLQAV ASKK+FRIG Q++P++F WL+ +H ++ K N+
Sbjct: 246 RKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAKHKKLNS 305
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+++ +CFQGE+EV T +G G SR+PFL L LDLP
Sbjct: 306 NVVNDCFQGEVEV------------RTTTAEGEATGQ-----PPSVSRVPFLFLTLDLPQ 348
Query: 362 PPLFKDVMEKNIIPQ------LQRLSGHMWQ 386
P+FKD +++N+IP LQ+ +G Q
Sbjct: 349 APIFKDSLDRNMIPHIPIFDLLQKFNGEQIQ 379
>gi|403357602|gb|EJY78428.1| U4/U6.U5 tri-snRNP-associated protein 2 [Oxytricha trifallax]
Length = 559
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 193/326 (59%), Gaps = 45/326 (13%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHS 156
+L ++DCPYL + R +LDFD EK CSV+LSNLN+Y+CL CGKYYQG+G+ + AY HS
Sbjct: 45 QLKRSKKDCPYLGQIKRHMLDFDLEKQCSVTLSNLNIYSCLTCGKYYQGKGKTTQAYIHS 104
Query: 157 LEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------- 191
LE H+V+INL+ KV+CLPD YE++D +L DI++
Sbjct: 105 LEQQHNVFINLQDSKVWCLPDNYEVDDAALNDIKYNLIPLYNQQLVDKLDSEPMIARALD 164
Query: 192 --------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI----PENYRHC--KSPLVHRF 237
+GLNN+K+TDFVNV IQSL RV PLR++ L EN K LV +F
Sbjct: 165 GTQFYPGSLGLNNLKQTDFVNVIIQSLCRVKPLRDYCLFYNIHSENLSMADQKHLLVVKF 224
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
+L +KIW+ +NFKG VSPHE LQA+ AS+KRF+IG Q +P++ +SWLLNT + DL +
Sbjct: 225 AELIKKIWNPKNFKGHVSPHELLQAISLASQKRFKIGEQKDPIQLLSWLLNTFNEDLHSQ 284
Query: 298 KKN-----TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHD-NITTETSRMP 351
+K ++I + FQGELE+ IPK N N S D D + +
Sbjct: 285 QKQKKLKGLNMIEKTFQGELEISSLIPKGKQDANFLNKLAVSKTNMDTDVQYEMKNQKTK 344
Query: 352 FLMLGLDLPPPPLFKDVMEKNIIPQL 377
F L LDLP PLFK+ + IPQ+
Sbjct: 345 FFFLALDLPTIPLFKEQNQLAAIPQI 370
>gi|237841835|ref|XP_002370215.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
gi|211967879|gb|EEB03075.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
gi|221503124|gb|EEE28830.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
VEG]
Length = 571
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 197/331 (59%), Gaps = 65/331 (19%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
++RR CPYL T+ R +LDFDFEK C + LSN +VYACLVC +Y+QGRG+ ++AY H+L+
Sbjct: 70 QLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNTYAYMHALQE 129
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
H+VY+NL+ +VYCLP+ YE+ D SL+DI +
Sbjct: 130 QHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYTKEDVAQLSTRIIYGKALDGAD 189
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-----ENYRHCKSPLVHRFGDLT 241
VGLNN+K TDF N IQSL V PLRN+ L+ +NY P++ G+L
Sbjct: 190 YIPGCVGLNNLKRTDFCNAMIQSLCTVVPLRNWLLLLDLSHVQNY----DPVLQTLGELM 245
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKI++ARNFKG VSPHEFLQAV ASKK+FRIG Q++P++F WL+ +H ++ K N+
Sbjct: 246 RKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAKHKKLNS 305
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+++ +CFQGE+EV T +G G SR+PFL L LDLP
Sbjct: 306 NVVNDCFQGEVEV------------RTTTAEGEATGQ-----PPSVSRVPFLFLTLDLPQ 348
Query: 362 PPLFKDVMEKNIIPQ------LQRLSGHMWQ 386
P+FKD +++N+IP LQ+ +G Q
Sbjct: 349 APIFKDSLDRNMIPHIPIFDLLQKFNGEQIQ 379
>gi|353237014|emb|CCA68997.1| related to SAD1-SnRNP assembly defective [Piriformospora indica DSM
11827]
Length = 569
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 209/348 (60%), Gaps = 44/348 (12%)
Query: 67 QNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-YLDTVNRQVLDFDFEKFCS 125
+ R G D E++D+ +G +RL E +R YLDTVNR VLDFDFEK CS
Sbjct: 64 KTTRNGTSPDARAHEEDDEDEDGGNATPAARLKEEQRASDLYLDTVNRAVLDFDFEKVCS 123
Query: 126 VSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPS 185
VSLSN+N+YACLVCGKY+QGR + + A+ HS+ HHV+INL T +VY LPDGY+++DPS
Sbjct: 124 VSLSNINIYACLVCGKYFQGRSKLTPAFAHSIHDDHHVFINLETLQVYVLPDGYKVSDPS 183
Query: 186 LEDIR--------------------------------HVGLNNIKETDFVNVTIQSLMRV 213
L+DI ++GLNNIK D+ NV I +L+ V
Sbjct: 184 LDDISRVLAPKFTKESIAALSHPQTAFDLQNEPYAPGYIGLNNIKANDYANVIIHALLHV 243
Query: 214 TPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
PL L+ NY + + L+ RF L +K+W++ FK QVSPHEFLQ V + S +F I
Sbjct: 244 -PLIRDPLLASNYTNKSTQLLIRFATLAKKLWNSHLFKAQVSPHEFLQEVTRVSAGKFGI 302
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTK-KNTSIIYECFQGELEVVKE--IPKNTISGNDQNT 330
Q +PVEF+ WLLN LH D TK +N+S+IY FQGEL + + I K+ +SG+ N
Sbjct: 303 MKQGDPVEFLGWLLNALHKDAGGTKRRNSSMIYSAFQGELRLDTQQVIVKDELSGH-VNA 361
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME-KNIIPQL 377
D + +++R PFL L +DLPPPPLF+D +E KNIIPQ+
Sbjct: 362 RPEFDIDRE-----IKSNRSPFLFLAIDLPPPPLFQDAIEAKNIIPQV 404
>gi|255950052|ref|XP_002565793.1| Pc22g18900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592810|emb|CAP99178.1| Pc22g18900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 609
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 187/313 (59%), Gaps = 54/313 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY H+LE GHHV+IN
Sbjct: 106 YLDTINREILDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHALEVGHHVFIN 165
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+N+ SLEDI++ VG
Sbjct: 166 IGTKKVYVLPEGYEVNNKSLEDIKYVVDPHYTKNQVVKLDKEVHDAWDLSGSRYRPGFVG 225
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D+VNV Q L V P+RNFFL+ E ++ RF L RK+W+ + F+
Sbjct: 226 MNNIKANDYVNVVAQLLAHVLPIRNFFLLHEFPTPGTPEIILRFSTLVRKLWNPKAFRSH 285
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ V S KRF + Q++PV+F+SW LN+LH L +KK TS+++ FQ
Sbjct: 286 VSPHELLQEVAVRSSKRFTLTNQADPVDFLSWFLNSLHLALGGSKKPSPTPTSVVHAAFQ 345
Query: 310 GELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
G + + E T + QN TE G T + PFL+L LDLPP PL
Sbjct: 346 GRVRI--ESQAITAHSDTQNARLVFTESG----------TINSQVTPFLILTLDLPPTPL 393
Query: 365 FKDVMEKNIIPQL 377
F+ ++ IPQ+
Sbjct: 394 FQSANRESSIPQV 406
>gi|398395581|ref|XP_003851249.1| hypothetical protein MYCGRDRAFT_110099 [Zymoseptoria tritici
IPO323]
gi|339471128|gb|EGP86225.1| hypothetical protein MYCGRDRAFT_110099 [Zymoseptoria tritici
IPO323]
Length = 533
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 190/311 (61%), Gaps = 55/311 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSV+LSN+NVYACLVCGKY+ GRG K+ AY H+LE GHHVYIN
Sbjct: 78 YLDTISRTRLDFDFEKLCSVTLSNINVYACLVCGKYFSGRGHKTPAYFHALEEGHHVYIN 137
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR---------------------------------HVG 193
+ T+KV+ LP+GYE+ + SL+DI+ VG
Sbjct: 138 METKKVWVLPEGYEVKNKSLDDIKVVVDPRFTQEEVKTLDKEPKPAWDLLGKKYIPGFVG 197
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNNIK D++NV +Q+L VTPLRNF ++ + + LV RF L RKIW+++ FK
Sbjct: 198 LNNIKANDYLNVVVQALSHVTPLRNFLMLED--LSSRPQLVQRFSVLVRKIWNSKAFKSH 255
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE +Q V S K+F + Q++PV+F+SW LN LH L TK ++S++ + FQG
Sbjct: 256 VSPHELIQEVALRSNKKFLLTEQADPVDFLSWFLNNLHLSLGGSKTKSHSSLVQKIFQGT 315
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L + Q+ +D GD D I ++TS PF++L LDLPP PLF+
Sbjct: 316 LRI-----------ESQSISARADAGDRLRFEDAGVIKSQTS--PFMILTLDLPPAPLFQ 362
Query: 367 DVMEKNIIPQL 377
D +EKNIIPQ+
Sbjct: 363 DDVEKNIIPQV 373
>gi|239611636|gb|EEQ88623.1| snRNP assembly factor [Ajellomyces dermatitidis ER-3]
gi|327348352|gb|EGE77209.1| SnRNP assembly factor [Ajellomyces dermatitidis ATCC 18188]
Length = 615
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 184/312 (58%), Gaps = 52/312 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+L+ GHHV++N
Sbjct: 108 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALDVGHHVFVN 167
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR---------------------------------HVG 193
+ T+KVY LP+GYE+ SL+DI+ +VG
Sbjct: 168 METKKVYVLPEGYEVKSRSLDDIKYVVDPQYKKEEVAKLDKVVIDAWDLAGKRYRPGYVG 227
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ + L RFG L RK+W+ R F+
Sbjct: 228 MNNIKSNDYLNVIVQVLAHVRPIRNFFLLHQFPTPGTPQLPLRFGILVRKLWNPRAFRSH 287
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L +K K TS+I+ FQ
Sbjct: 288 VSPHELLQEVALRSSKRFTLTQQSDPVDFLSWFLNNLHLTLGGSKKPSPKPTSVIHSAFQ 347
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G+L + Q SD + +++ T + PFL+L LDLPP PLF
Sbjct: 348 GQLRI-----------ESQAITARSDAANARLVFSESMETTSQTTPFLILTLDLPPTPLF 396
Query: 366 KDVMEKNIIPQL 377
+ ++IIPQ+
Sbjct: 397 QSTNTESIIPQV 408
>gi|258566686|ref|XP_002584087.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905533|gb|EEP79934.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 607
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/310 (46%), Positives = 191/310 (61%), Gaps = 48/310 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R LDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY HSLE GHHV++N
Sbjct: 100 YLDTIQRSNLDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHSLEIGHHVFVN 159
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T++VY LP+GYE+ + SL+DI++V G
Sbjct: 160 METKRVYVLPEGYEVKNKSLDDIKYVVDPTYTKEEVARLDTVVIEAWDLAGRKYRPGYVG 219
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKG 252
+NNIK D++NV +Q L V P+RNFFL+ +++ +P L RFG L RK+W+ + FK
Sbjct: 220 MNNIKSNDYLNVIVQLLAHVRPIRNFFLL-HHFQIPGTPQLPLRFGTLVRKLWNPKAFKC 278
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECF 308
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS+I+ F
Sbjct: 279 HVSPHELLQEIALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAF 338
Query: 309 QGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
QG L + + I + S N + S TT + +MPFL+L LDLPP PLF+
Sbjct: 339 QGHLRIESQAITARSDSANARLVFSESS--------TTTSQKMPFLILTLDLPPTPLFQS 390
Query: 368 VMEKNIIPQL 377
+++IIPQ+
Sbjct: 391 ADKESIIPQV 400
>gi|261201494|ref|XP_002627147.1| snRNP assembly factor [Ajellomyces dermatitidis SLH14081]
gi|239592206|gb|EEQ74787.1| snRNP assembly factor [Ajellomyces dermatitidis SLH14081]
Length = 615
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 184/312 (58%), Gaps = 52/312 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+L+ GHHV++N
Sbjct: 108 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALDVGHHVFVN 167
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR---------------------------------HVG 193
+ T+KVY LP+GYE+ SL+DI+ +VG
Sbjct: 168 METKKVYVLPEGYEVKSRSLDDIKYVVDPQYKKEEVAKLDKVVIDAWDLAGKRYRPGYVG 227
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ + L RFG L RK+W+ R F+
Sbjct: 228 MNNIKSNDYLNVIVQVLAHVRPIRNFFLLHQFPTPGTPQLPLRFGILVRKLWNPRAFRSH 287
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L +K K TS+I+ FQ
Sbjct: 288 VSPHELLQEVALRSSKRFTLTQQSDPVDFLSWFLNNLHLTLGGSKKPSPKPTSVIHSAFQ 347
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G+L + Q SD + +++ T + PFL+L LDLPP PLF
Sbjct: 348 GQLRI-----------ESQAITARSDAANARLVFSESMETTSQTTPFLILTLDLPPTPLF 396
Query: 366 KDVMEKNIIPQL 377
+ ++IIPQ+
Sbjct: 397 QSTNTESIIPQV 408
>gi|340904868|gb|EGS17236.1| ubiquitin thiolesterase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 557
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 191/306 (62%), Gaps = 45/306 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSV+LSN+NVYACLVCGKYYQGRG +HAY H+L+ HHV+IN
Sbjct: 94 YLDTIDRNVLDFDFEKLCSVTLSNINVYACLVCGKYYQGRGPNTHAYFHALDEDHHVFIN 153
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T+KVY LP+GYE+ SL+DI++V G
Sbjct: 154 LSTQKVYVLPEGYEVKSKSLDDIKYVSDPRYTRQEVAEFDRKPRTSYTLQGKEYTPGFVG 213
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +Q+L V+PLRNFFL+ E++ + LV R L RKIW+ R FK
Sbjct: 214 MNNIKENDYLNVIVQALSHVSPLRNFFLL-EDFSNAPE-LVKRTSILFRKIWNPRAFKAH 271
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L TK +S++ FQG+
Sbjct: 272 VSPHELLQEVSLCSNKRFTLTAQSDPVDFLSWYLNNLHLGLGGSKTKPQSSVVQRIFQGK 331
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
L+V + I+ + ++ ++ I + +R FL+L LDLPP PLF+D E+
Sbjct: 332 LKVESQ----AITARADHLDRLR--FEEATEIKVDIAR--FLLLTLDLPPAPLFQDEQER 383
Query: 372 NIIPQL 377
NIIPQ+
Sbjct: 384 NIIPQV 389
>gi|346974195|gb|EGY17647.1| U4/U6.U5 tri-snRNP-associated protein [Verticillium dahliae
VdLs.17]
Length = 549
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/311 (46%), Positives = 189/311 (60%), Gaps = 55/311 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CS+SLSN+NVYACLVCG+Y+QGRG KSHAY H+L+ GHHVYIN
Sbjct: 92 YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGRYFQGRGPKSHAYFHALDEGHHVYIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
++T+ VY LP+GYE+ SL+DI++ VG
Sbjct: 152 MQTQNVYVLPEGYEVKSKSLDDIKYVSDPRYTKQEVMELDRRAQPAWTLAGKEYAPGFVG 211
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NN+KE D++NV +Q+L V PLRN+FL+ E++ +S L R L RKIW+ R FK
Sbjct: 212 MNNLKENDYLNVILQALSHVVPLRNYFLL-EDF-SSRSELAKRTSILVRKIWNPRAFKAH 269
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+P+EF+SW LN LH L TK +S+I+ FQG+
Sbjct: 270 VSPHELLQQIALDSNKRFTLTNQSDPIEFLSWFLNNLHLGLGGSKTKPGSSMIHRIFQGK 329
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L+V Q +D GD D ++ SR FL+L LDLP PLF+
Sbjct: 330 LKV-----------ESQAITARADAGDRLRFEDAADVHVAVSR--FLLLTLDLPAAPLFQ 376
Query: 367 DVMEKNIIPQL 377
D +NIIPQ+
Sbjct: 377 DENNRNIIPQV 387
>gi|401395797|ref|XP_003879683.1| ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
gi|325114090|emb|CBZ49648.1| ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
Length = 562
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 197/331 (59%), Gaps = 65/331 (19%)
Query: 100 EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEA 159
++RR CPYL T+ R +LDFDFEK C + LSN +VYACLVC +Y+QGRG+ ++AY H+L+
Sbjct: 62 QLRRTCPYLGTIKRHLLDFDFEKVCCICLSNQHVYACLVCARYFQGRGKNTYAYMHALQE 121
Query: 160 GHHVYINLRTEKVYCLPDGYEINDPSLEDIRH---------------------------- 191
H+VY+NL+ +VYCLP+ YE+ D SL+DI +
Sbjct: 122 QHYVYLNLKDCRVYCLPENYEVKDASLDDIIYNLHPTYSTEDVAQLSTRIIYGKALDGAD 181
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-----ENYRHCKSPLVHRFGDLT 241
VGLNN+K TDF N IQSL V PLRN+ L+ +NY P++ G+L
Sbjct: 182 YIPGCVGLNNLKRTDFCNAIIQSLCAVIPLRNWLLLLDLSHVQNY----DPVLQTLGELM 237
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKI++ARNFKG VSPHEFLQAV ASKK+FRIG Q++P++F WL+ +H ++ K N+
Sbjct: 238 RKIFNARNFKGIVSPHEFLQAVGVASKKKFRIGEQADPLQFFCWLMARVHQSAKHKKVNS 297
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+++ +CFQGE+EV T +G G SR+PFL L LDLP
Sbjct: 298 NVVNDCFQGEVEV------------RTTTAEGEATGQ-----PPSVSRIPFLFLTLDLPQ 340
Query: 362 PPLFKDVMEKNIIPQ------LQRLSGHMWQ 386
P+FKD +++N+IP LQ+ +G Q
Sbjct: 341 APIFKDSLDRNMIPHIPIFDLLQKFNGEQIQ 371
>gi|325092320|gb|EGC45630.1| proteasome component [Ajellomyces capsulatus H88]
Length = 805
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 182/312 (58%), Gaps = 52/312 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CS+SLSN+NVYACLVCGKYYQGRG KSHAY H+L+ GHHV++N
Sbjct: 293 YLDTIQRSVLDFDFEKQCSISLSNINVYACLVCGKYYQGRGPKSHAYFHALDVGHHVFVN 352
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ SL+DI++ VG
Sbjct: 353 METKKVYVLPEGYEVKSRSLDDIKYVVDPQYKKEEVAKLDKAVTDAWDLAGKRYRPGFVG 412
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ + L RFG L RK+W+ R FK
Sbjct: 413 MNNIKSNDYLNVIVQVLSHVRPIRNFFLLHQFPMPGTPQLPLRFGILVRKLWNPRAFKSH 472
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L +KK TS+I+ FQ
Sbjct: 473 VSPHELLQEVALRSSKRFTLTQQSDPVDFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAFQ 532
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ T + PFL+L LDLPP PLF
Sbjct: 533 GHLRI-----------ESQAITARSDAANARLVFSESSETTSQTTPFLILTLDLPPTPLF 581
Query: 366 KDVMEKNIIPQL 377
+ ++IIPQ+
Sbjct: 582 QSTNAESIIPQI 593
>gi|225562344|gb|EEH10623.1| proteasome component C11 [Ajellomyces capsulatus G186AR]
Length = 805
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 182/312 (58%), Gaps = 52/312 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCGKYYQGRG KSHAY H+L+ GHHV++N
Sbjct: 293 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGKYYQGRGPKSHAYFHALDVGHHVFVN 352
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ SL+DI++ VG
Sbjct: 353 METKKVYVLPEGYEVKSRSLDDIKYVVDPQYKKEEVAKLDKAVIDAWDLAGKRYRPGFVG 412
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ + L RFG L RK+W+ R FK
Sbjct: 413 MNNIKSNDYLNVIVQVLSHVRPIRNFFLLHQFPMPGTPQLPLRFGILVRKLWNPRAFKSH 472
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L +KK TS+I+ FQ
Sbjct: 473 VSPHELLQEVALRSSKRFTLTQQSDPVDFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAFQ 532
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ T + PFL+L LDLPP PLF
Sbjct: 533 GHLRI-----------ESQAITARSDAANARLVFSESSETTSQTTPFLILTLDLPPTPLF 581
Query: 366 KDVMEKNIIPQL 377
+ ++IIPQ+
Sbjct: 582 QSTNAESIIPQI 593
>gi|46124823|ref|XP_386965.1| hypothetical protein FG06789.1 [Gibberella zeae PH-1]
Length = 534
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 188/306 (61%), Gaps = 46/306 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSL+ HHVYIN
Sbjct: 78 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLDEDHHVYIN 137
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
L +++VY LP+GYE+ +LEDI++ VG
Sbjct: 138 LESQRVYVLPEGYEVKSRALEDIKYVADPRYTKKEVIEMDRTRRTSQTLDAKEYIPGFVG 197
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D+ NV +Q+L V PLRN+ L+ E++ K+ LV R L RKIW+ R FK
Sbjct: 198 MNNIKENDYFNVVVQALAHVAPLRNYLLL-EDF-SSKTELVKRASILVRKIWNPRAFKAH 255
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + +QS+PV+F+SW LN LH L TK +S+I FQG+
Sbjct: 256 VSPHELLQEISLRSNKRFNLTLQSDPVDFLSWFLNNLHIGLGGSKTKPGSSMIQRTFQGK 315
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+++ + D+ + +D + + R FL+L LDLP PLF+D +EK
Sbjct: 316 MKIESQAITARADATDRLRFEDAD-------VKVDIVR--FLLLTLDLPSTPLFQDELEK 366
Query: 372 NIIPQL 377
NIIPQ+
Sbjct: 367 NIIPQV 372
>gi|449295218|gb|EMC91240.1| hypothetical protein BAUCODRAFT_39392 [Baudoinia compniacensis UAMH
10762]
Length = 561
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 216/392 (55%), Gaps = 67/392 (17%)
Query: 26 SSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRT-GEDDDEDKDEDED 84
S P+PP E DD D G G +GRT G ++ ED DE+
Sbjct: 33 SRPAPPAASSE------WRENDDSDGNGTINGEG--------SGRTPGHENHEDGTADEE 78
Query: 85 DLANGYGQGQRSRLV--EVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKY 142
+ +G SR + R YLDT++R+ +DFDFEK CS++L+N+NVYACLVCGKY
Sbjct: 79 EDDIDEPRGSSSRPAAPDERYSDLYLDTISRKNMDFDFEKLCSITLANINVYACLVCGKY 138
Query: 143 YQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR------------ 190
+ GRG K+ AY H+LE GHHVYIN+ T++VY LP+GYE+ SL+DI+
Sbjct: 139 FSGRGPKTPAYFHALEIGHHVYINMETKRVYVLPEGYEVKSKSLDDIKIVVDPRFAPEDV 198
Query: 191 ---------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC 229
VG+NNIK D++NV +Q+L+ V PLRNFF++ +
Sbjct: 199 KALDRRKEPSWDLFGKKYIPGFVGMNNIKANDYLNVVVQALVHVPPLRNFFMLED--LSS 256
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
K L RF LTRKIW+ + FK VSPHE +Q + S K+F + Q++PVEF+SW LN
Sbjct: 257 KPQLAQRFSILTRKIWNPKAFKSHVSPHELIQEISLRSSKKFLLTEQADPVEFLSWFLNH 316
Query: 290 LHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD--DHDNITT 345
LH L TK +S++ + FQG+L V Q +D GD ++
Sbjct: 317 LHLSLGGSKTKPRSSLVQKIFQGQLRV-----------ESQTITAHADAGDRLRFEDAAI 365
Query: 346 ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
++ PF++L LDLPP PLF+D EKNIIPQ+
Sbjct: 366 KSQSTPFMILTLDLPPAPLFQDDAEKNIIPQV 397
>gi|355751467|gb|EHH55722.1| hypothetical protein EGM_04981 [Macaca fascicularis]
Length = 563
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/317 (46%), Positives = 192/317 (60%), Gaps = 49/317 (15%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+ R VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HH
Sbjct: 103 RHCPYLDTI-RSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHH 161
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 162 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 221
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 222 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 281
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 282 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 341
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 342 TIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHN---DEYQETMVEST---FMYLTLDLP 395
Query: 361 PPPLFKDVMEKNIIPQL 377
PL+KD E+ IIPQ+
Sbjct: 396 TAPLYKDEKEQLIIPQV 412
>gi|341877318|gb|EGT33253.1| hypothetical protein CAEBREN_03779 [Caenorhabditis brenneri]
Length = 632
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 195/340 (57%), Gaps = 50/340 (14%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
D+D DE + Q ++ R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+
Sbjct: 141 DEDCDEPVWSMKKAQAEKKS-----RTCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACM 195
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------ 191
VCGKY+QGRG +HAYTH+LE HHV++NL+T K YCLPD YE+ DPSLEDI++
Sbjct: 196 VCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVVDPSLEDIKYVLKPTY 255
Query: 192 ---------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
VGLNNIK D+ NV + +L V PLRN+FL +
Sbjct: 256 TKEMIAAIDQQARMVRAYDDSTYFPGVVGLNNIKANDYCNVILHALSAVRPLRNWFLNEK 315
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
NY K P L RFG+L RK+W+ R + VSPHE LQAV+ SKKRF+ Q+
Sbjct: 316 NYLAIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSKKRFQFIKQN 375
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG 337
+ EF+++LL+TLH L + +II + F+G + +E + I D TE+
Sbjct: 376 DAHEFLAFLLDTLHRALNGKEDRQTIISKTFRGRM---REYSRKVIPAED--TEEDRYIK 430
Query: 338 DDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ PF L LDLP PL++DV +NIIPQ+
Sbjct: 431 ERMPEYQPTIKETPFNFLTLDLPAAPLYRDVQLQNIIPQV 470
>gi|322696197|gb|EFY87993.1| U4/U6.U5 tri-snRNP-associated protein 2 [Metarhizium acridum CQMa
102]
Length = 543
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 190/306 (62%), Gaps = 45/306 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++RQVLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ HHV+IN
Sbjct: 81 YLDTIDRQVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEDHHVFIN 140
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T+KVY LP+GYE+ SL+DI++V G
Sbjct: 141 LETQKVYVLPEGYEVKSKSLDDIKYVSDPRYTKREVMSLDRSHHKSWTLAGKEYTPGFVG 200
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +Q+L V PLRN+FL+ E++ + LV R L RKIW+ R FK
Sbjct: 201 MNNIKENDYLNVIVQALSHVPPLRNYFLL-EDFTKT-TELVKRCSILFRKIWNPRAFKAH 258
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +K +S+I FQG
Sbjct: 259 VSPHELLQEIALRSNKRFTLTTQSDPVEFLSWFLNNLHLGLGGSRSKPGSSMIQRTFQGR 318
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
L+V + I+ T++ ++ + + R FL+L LDLP PLF+D +E+
Sbjct: 319 LKVESQ----AITARADATDRLR--FEEAAQVKVDIVR--FLLLTLDLPAAPLFQDELER 370
Query: 372 NIIPQL 377
NIIPQ+
Sbjct: 371 NIIPQV 376
>gi|341881288|gb|EGT37223.1| hypothetical protein CAEBREN_03753 [Caenorhabditis brenneri]
Length = 632
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 195/340 (57%), Gaps = 50/340 (14%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACL 137
D+D DE + Q ++ R CPYLDT++R VLDFDFEK CSVSLS+ NVYAC+
Sbjct: 141 DEDCDEPVWSMKKAQAEKKS-----RTCPYLDTIDRSVLDFDFEKQCSVSLSHQNVYACM 195
Query: 138 VCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------ 191
VCGKY+QGRG +HAYTH+LE HHV++NL+T K YCLPD YE+ DPSLEDI++
Sbjct: 196 VCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLPDNYEVVDPSLEDIKYVLKPTY 255
Query: 192 ---------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
VGLNNIK D+ NV + +L V PLRN+FL +
Sbjct: 256 TKEMIAAIDQQARMVRAYDDSTYFPGVVGLNNIKANDYCNVILHALSAVRPLRNWFLNEK 315
Query: 225 NYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
NY K P L RFG+L RK+W+ R + VSPHE LQAV+ SKKRF+ Q+
Sbjct: 316 NYLAIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQAVVVCSKKRFQFIKQN 375
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGG 337
+ EF+++LL+TLH L + +II + F+G + +E + I D TE+
Sbjct: 376 DAHEFLAFLLDTLHRALNGKEDRQTIISKTFRGRM---REYSRKVIPAED--TEEDRYIK 430
Query: 338 DDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ PF L LDLP PL++DV +NIIPQ+
Sbjct: 431 ERMPEYQPTIKETPFNFLTLDLPAAPLYRDVQLQNIIPQV 470
>gi|346325327|gb|EGX94924.1| U4/U6.U5 tri-snRNP-associated protein 2 [Cordyceps militaris CM01]
Length = 554
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/314 (45%), Positives = 185/314 (58%), Gaps = 58/314 (18%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CS+SLSN+NVYACLVCG+Y+QGRG KSHAY HSL+ HHVYIN
Sbjct: 92 YLDTINRNVLDFDFEKLCSISLSNINVYACLVCGRYFQGRGPKSHAYFHSLDEDHHVYIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH----------------------------------- 191
L T++VY LP+GYE+ +L+DI++
Sbjct: 152 LETQRVYVLPEGYEVKSKALDDIKYVSDPRYTKKEVMQLDRAAGARKKSWTLGGKEYVPG 211
Query: 192 -VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
VG+NNIKE D++NV +Q+L V PLRN+ L+ + KS LV R L RKIW+ R F
Sbjct: 212 FVGMNNIKENDYLNVIVQALSHVAPLRNYLLLDDF--SGKSELVKRCSILFRKIWNPRAF 269
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECF 308
K VSPHE LQ + S KRF + QS+PV+F+SW LN LH L T+ +S++
Sbjct: 270 KSHVSPHELLQEIALRSNKRFTLTAQSDPVDFLSWFLNYLHLGLGGSKTRPGSSMVQRAL 329
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPP 363
QG L+V Q +D GD D + + R FL+L LDLPP P
Sbjct: 330 QGRLKV-----------ESQAITARADAGDRLRFEDAGEVKVDIVR--FLLLTLDLPPAP 376
Query: 364 LFKDVMEKNIIPQL 377
LF+D +E+NIIPQ+
Sbjct: 377 LFQDELERNIIPQV 390
>gi|345567454|gb|EGX50386.1| hypothetical protein AOL_s00076g150 [Arthrobotrys oligospora ATCC
24927]
Length = 571
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 188/306 (61%), Gaps = 45/306 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR +LDFDFEK CS+SLSN+NVYACLVCGKY+QGRGQ SHAY H+L+ HHV+IN
Sbjct: 118 YLDTVNRNLLDFDFEKLCSISLSNINVYACLVCGKYFQGRGQNSHAYFHALDESHHVFIN 177
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T ++Y LP+ YE+ SL+DI++V G
Sbjct: 178 IATLRIYVLPESYEVKQKSLDDIKYVANPTYTREDVAKLDKEETKKWDLTGKRYTPGFVG 237
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNNIKE D++NV + +L VTPLRN+ ++ EN + L RF L RKIW++R F+G
Sbjct: 238 LNNIKENDYLNVVVHALAHVTPLRNYMML-ENM-SSRPELAQRFSILVRKIWNSRAFRGH 295
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S K+F + QS+PVEF+SW +N LH L T +SI+ + FQG
Sbjct: 296 VSPHELLQEISLRSSKKFTLTTQSDPVEFLSWFVNNLHLSLGGSKTAPGSSIVQKVFQGR 355
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
L V E T + + + + G+ + T+ R ++ML L+LPP PLF+D ++K
Sbjct: 356 LRV--ESQAITAKADASDRLRFEEAGE----VKTDMHR--YMMLTLELPPAPLFQDELDK 407
Query: 372 NIIPQL 377
NIIPQ+
Sbjct: 408 NIIPQV 413
>gi|171693595|ref|XP_001911722.1| hypothetical protein [Podospora anserina S mat+]
gi|170946746|emb|CAP73550.1| unnamed protein product [Podospora anserina S mat+]
Length = 547
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/311 (46%), Positives = 188/311 (60%), Gaps = 55/311 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ HHVYIN
Sbjct: 80 YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEDHHVYIN 139
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ SL+DI++ VG
Sbjct: 140 MSTQKVYVLPEGYEVMSKSLDDIKYVSDPRYTRQEVAEFDRKPRTSRTLLGKEYTPGFVG 199
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +QSL V+PLRN+FL+ + + + LV R L RKIW+ R FK
Sbjct: 200 MNNIKENDYLNVIVQSLSHVSPLRNYFLLEDLSK--RDELVKRTSILFRKIWNPRAFKSH 257
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK--NTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +K+ ++S I QG+
Sbjct: 258 VSPHELLQEISLRSNKRFTLTAQSDPVEFLSWYLNNLHLGLGGSKRKPHSSPIQHILQGK 317
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L+V Q +D D + + T+ SR FL+L LDLPP PLF+
Sbjct: 318 LKV-----------ESQAITAKADASDRLRFEESAQVQTDISR--FLLLTLDLPPAPLFQ 364
Query: 367 DVMEKNIIPQL 377
D E NIIPQ+
Sbjct: 365 DEQEANIIPQV 375
>gi|317146151|ref|XP_001821327.2| snRNP assembly factor [Aspergillus oryzae RIB40]
Length = 615
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/309 (45%), Positives = 187/309 (60%), Gaps = 46/309 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY H LE GHHV+IN
Sbjct: 111 YLDTINREILDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHGLEVGHHVFIN 170
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ + SL+DI++ VG
Sbjct: 171 MGTKKVYVLPEGYEVKNKSLDDIKYVVDPHYSKEEVSKLDKEVHDAFDLAGNRYRPGFVG 230
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RN+FL+ E L RF L RK+W+ + F+
Sbjct: 231 MNNIKANDYLNVVVQLLAHVFPIRNYFLLHEFPTPGTPQLALRFSTLVRKLWNPKAFRSH 290
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS++ FQ
Sbjct: 291 VSPHELLQEIALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQ 350
Query: 310 GELEVVKEIPKNTISGNDQNTE-KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
G L + E T + QN ++ GD I ++T+ PFL+L LDLPP PLF+
Sbjct: 351 GHLRI--ESQAITAHSDTQNARLVFTESGD----IKSQTT--PFLILTLDLPPTPLFQSA 402
Query: 369 MEKNIIPQL 377
++IIP +
Sbjct: 403 NRESIIPHV 411
>gi|70994592|ref|XP_752073.1| snRNP assembly factor [Aspergillus fumigatus Af293]
gi|66849707|gb|EAL90035.1| snRNP assembly factor, putative [Aspergillus fumigatus Af293]
gi|159125012|gb|EDP50129.1| snRNP assembly factor, putative [Aspergillus fumigatus A1163]
Length = 614
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 184/313 (58%), Gaps = 54/313 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSVSLSN+NVYACLVCGKY+QGRG +S+AY H+LE GHHV+IN
Sbjct: 111 YLDTINREILDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPRSYAYFHALEVGHHVFIN 170
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ SLEDI++ VG
Sbjct: 171 ISTKKVYVLPEGYEVKSKSLEDIKYVVDPHYSKEEVSKLDKEVHDAFDLAGNRYRPGFVG 230
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RN+FL+ + L RF L RK+W+ + F+
Sbjct: 231 MNNIKANDYLNVVVQVLAHVLPIRNYFLLHQFPVPGTPELALRFSTLVRKLWNPKAFRSH 290
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS+I FQ
Sbjct: 291 VSPHELLQEIALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSSTPTSVIQAAFQ 350
Query: 310 GELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
G L + E T + QN TE G T + +PFL+L LDLPP PL
Sbjct: 351 GHLRI--ESQAITAHSDTQNARLVFTESG----------TINSQTIPFLILTLDLPPTPL 398
Query: 365 FKDVMEKNIIPQL 377
F+ ++IIP +
Sbjct: 399 FQSANRESIIPHV 411
>gi|391869251|gb|EIT78453.1| spindle pole body protein - Sad1p [Aspergillus oryzae 3.042]
Length = 616
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/426 (39%), Positives = 226/426 (53%), Gaps = 63/426 (14%)
Query: 1 MTKKRKNNGSADEDR-----HVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEY 55
M KR+ + +ED +K +V + PR G LPL + EE+E
Sbjct: 1 MMSKRQAELALEEDTVAGSPAIKKARVEDDIEEGDPRHG----ALPLRRASGQEREEDER 56
Query: 56 GGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGY------GQGQRSRLVEVRRDCPYLD 109
G D A Q G E+ D + D ++S +E D YLD
Sbjct: 57 KG-NDILAAADQEGEELEEAAVDNGAESDFDDADDDRPVIAAPKRQSAPMEGYSDL-YLD 114
Query: 110 TVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRT 169
T+NR +LDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY H LE GHHV+IN+ T
Sbjct: 115 TINRGILDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHGLEVGHHVFINMGT 174
Query: 170 EKVYCLPDGYEINDPSLEDIRH---------------------------------VGLNN 196
+KVY LP+GYE+ + SL+DI++ VG+NN
Sbjct: 175 KKVYVLPEGYEVKNKSLDDIKYVVDPHYSKEEVSKLDKEVHDAFDLAGNRYRPGFVGMNN 234
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSP 256
IK D++NV +Q L V P+RN+FL+ E L RF L RK+W+ + F+ VSP
Sbjct: 235 IKANDYLNVVVQLLAHVFPIRNYFLLHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSP 294
Query: 257 HEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQGEL 312
HE LQ + S KRF + QS+PVEF+SW LN LH L +KK TS++ FQG L
Sbjct: 295 HELLQEIALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHL 354
Query: 313 EVVKEIPKNTISGNDQNTE-KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+ E T + QN ++ GD I ++T+ PFL+L LDLPP PLF+ +
Sbjct: 355 RI--ESQAITAHSDTQNARLVFTESGD----IKSQTT--PFLILTLDLPPTPLFQSANRE 406
Query: 372 NIIPQL 377
+IIP +
Sbjct: 407 SIIPHV 412
>gi|119501032|ref|XP_001267273.1| snRNP assembly factor, putative [Neosartorya fischeri NRRL 181]
gi|119415438|gb|EAW25376.1| snRNP assembly factor, putative [Neosartorya fischeri NRRL 181]
Length = 614
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 200/345 (57%), Gaps = 58/345 (16%)
Query: 75 DDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVY 134
+ D DED +A ++S +E D YLDT+NR++LDFDFEK CSVSLSN+NVY
Sbjct: 83 ESSDVDEDRPVIA---APKRQSEPMEGYSDL-YLDTINREILDFDFEKLCSVSLSNINVY 138
Query: 135 ACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--- 191
ACLVCGKY+QGRG KS+AY H+LE GHHV+IN+ T+KVY LP+GYE+ SL+DI++
Sbjct: 139 ACLVCGKYFQGRGPKSYAYFHALEVGHHVFINISTKKVYVLPEGYEVKSKSLDDIKYVVD 198
Query: 192 ------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
VG+NNIK D++NV +Q L V P+RN+FL
Sbjct: 199 PHYSKEEVSKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYLNVVVQVLAHVFPIRNYFL 258
Query: 222 IPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
+ + L RF L RK+W+ + F+ VSPHE LQ + S KRF + QS+PVE
Sbjct: 259 LHQFPVPGTPELALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSKRFTLTQQSDPVE 318
Query: 282 FMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISGNDQN-----TEK 332
F+SW LN LH L +KK TS+I FQG L + E T + QN TE
Sbjct: 319 FLSWFLNNLHLSLGGSKKPSSTPTSVIQAAFQGHLRI--ESQAITAHSDTQNARLVFTES 376
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
G+ I ++T+ PFL+L LDLPP PLF+ ++IIP +
Sbjct: 377 GT--------INSQTT--PFLILTLDLPPTPLFQSANRESIIPHV 411
>gi|408388380|gb|EKJ68066.1| hypothetical protein FPSE_11877 [Fusarium pseudograminearum CS3096]
Length = 534
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 187/306 (61%), Gaps = 46/306 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSL+ HHVYIN
Sbjct: 78 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLDEDHHVYIN 137
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
L +++VY LP+GYE+ +LEDI++ VG
Sbjct: 138 LESQRVYVLPEGYEVKSRALEDIKYVADPRYTKKEVIEMDRTRRTSQTLDAKEYIPGFVG 197
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D+ NV +Q+L V PLRN+ L+ E++ K+ LV R L RKIW+ R FK
Sbjct: 198 MNNIKENDYFNVVVQALAHVAPLRNYLLL-EDF-SSKTELVKRASILVRKIWNPRAFKAH 255
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PV+F+SW LN LH L TK +S+I FQG+
Sbjct: 256 VSPHELLQEISLRSNKRFNLTSQSDPVDFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQGK 315
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+++ + D+ + +D + + R FL+L LDLP PLF+D +EK
Sbjct: 316 MKIESQAITARADATDRLRFEDAD-------VKVDIVR--FLLLTLDLPSTPLFQDELEK 366
Query: 372 NIIPQL 377
NIIPQ+
Sbjct: 367 NIIPQV 372
>gi|440635643|gb|ELR05562.1| hypothetical protein GMDG_07482 [Geomyces destructans 20631-21]
Length = 536
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 186/311 (59%), Gaps = 55/311 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSV+LSN+NVYACLVCG+YYQGRG KSHAY HSL+ HHVYIN
Sbjct: 90 YLDTIDRHVLDFDFEKLCSVTLSNINVYACLVCGRYYQGRGPKSHAYFHSLDVDHHVYIN 149
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR---------------------------------HVG 193
++T+K+Y LP+GYE+ + SL+DI+ VG
Sbjct: 150 MQTQKIYVLPEGYEVKNKSLDDIKFVSDPRYTKQEVMGLDHAPKEAWALNGKQYTPGFVG 209
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK+ D+ NV IQ+L V PLRN+F++ + K L R L RKIW+ R FK
Sbjct: 210 MNNIKDNDYFNVVIQALSHVPPLRNYFMLDDF--STKPELAKRLSILVRKIWNPRAFKAH 267
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ V S K+F + Q++PV+F+SW LN LH L TK +SI+ + FQG+
Sbjct: 268 VSPHELLQEVSLRSNKKFSLTQQADPVDFLSWFLNNLHVALGGSKTKPGSSIMQQIFQGK 327
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L++ Q +D GD + + + SR FL L LDLP PLF+
Sbjct: 328 LKI-----------ESQAITAKADAGDRLRFEEAAEVKADVSR--FLFLTLDLPAAPLFQ 374
Query: 367 DVMEKNIIPQL 377
D +E+NIIPQ+
Sbjct: 375 DELERNIIPQV 385
>gi|452980130|gb|EME79891.1| hypothetical protein MYCFIDRAFT_37991 [Pseudocercospora fijiensis
CIRAD86]
Length = 545
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 204/354 (57%), Gaps = 60/354 (16%)
Query: 68 NGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP-------YLDTVNRQVLDFDF 120
NGR D+ D + +D++ G + R++ P YLDT++R LDFDF
Sbjct: 48 NGRANGDNG---DHNAEDVSEEEGDDDGADDAPSRQNAPALGYSDLYLDTISRTRLDFDF 104
Query: 121 EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE 180
EK CS++LSN+NVYACLVCGKY+ GRG K+ AY H+LE GHHVY+N++T+KVY LP+GYE
Sbjct: 105 EKLCSITLSNINVYACLVCGKYFTGRGAKTPAYFHALEDGHHVYVNMQTKKVYVLPEGYE 164
Query: 181 INDPSLEDIRHV---------------------------------GLNNIKETDFVNVTI 207
+ + SL+DI+ V GLNNIK D++NV +
Sbjct: 165 VKNKSLDDIKFVVDPTFTPEEVKTLDKEPKPQWDLLGRKYIPGFVGLNNIKANDYLNVVV 224
Query: 208 QSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKAS 267
Q+L V PLRNF ++ + KS L+ RF + RKIW+ + FK VSPHE +Q V S
Sbjct: 225 QALSHVVPLRNFLMLED--LSLKSELIKRFSIMVRKIWNPKAFKSHVSPHELIQEVSLRS 282
Query: 268 KKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISG 325
K+F + Q++P++F+SW LN LH L TK +S+I + FQG L V
Sbjct: 283 GKKFLLTQQADPIDFLSWFLNNLHLALGGSKTKPKSSLIQKIFQGSLRV----------- 331
Query: 326 NDQNTEKGSDGGD--DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
Q +D GD ++ ++ + PF++L LDLPP PLF+D +EKNIIPQ+
Sbjct: 332 ESQEITARADAGDRLRFEDTAIKSQQSPFMILTLDLPPAPLFQDDVEKNIIPQV 385
>gi|425781824|gb|EKV19768.1| hypothetical protein PDIG_01090 [Penicillium digitatum PHI26]
gi|425782954|gb|EKV20832.1| hypothetical protein PDIP_12410 [Penicillium digitatum Pd1]
Length = 608
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 186/313 (59%), Gaps = 54/313 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+LE GHHV+IN
Sbjct: 105 YLDTINREILDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALEVGHHVFIN 164
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+N+ SLEDI++ VG
Sbjct: 165 IGTKKVYVLPEGYEVNNKSLEDIKYVVDPHYTKNQVIKLDKEVHDAWDLSGSRYRPGFVG 224
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D+VNV Q L V P+RNFFL+ E ++ RF L RK+W+ + F+
Sbjct: 225 MNNIKANDYVNVVAQLLAHVLPIRNFFLLHEFPTPGTPEIILRFSTLVRKLWNPKAFRSH 284
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ + S KRF + Q++PV+F+SW LN LH L +KK TS+++ FQ
Sbjct: 285 VSPHELLQEIALRSSKRFTLTNQADPVDFLSWFLNCLHLALGGSKKPSSTPTSVVHAAFQ 344
Query: 310 GELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
G + + E T + QN TE G T + PFL+L LDLPP PL
Sbjct: 345 GRVRI--ESQAITAHSDTQNARLVFTESG----------TINSQVTPFLILTLDLPPTPL 392
Query: 365 FKDVMEKNIIPQL 377
F+ ++ IPQ+
Sbjct: 393 FQSANRESSIPQV 405
>gi|296415598|ref|XP_002837473.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633345|emb|CAZ81664.1| unnamed protein product [Tuber melanosporum]
Length = 550
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 198/339 (58%), Gaps = 45/339 (13%)
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNV 133
D DED D ++D G G+ YLDT+NR ++ DFEK CSVSLSN+NV
Sbjct: 63 DMDEDGDYEDDVAVGQLGVGKAQEGPSEGFSDLYLDTINRLLIKVDFEKLCSVSLSNINV 122
Query: 134 YACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV- 192
YACLVCGKY+QGRG+ SHAYTHSL+ HHV+IN+ + KVY LP+ YE+ + +LEDI++V
Sbjct: 123 YACLVCGKYFQGRGRSSHAYTHSLDQDHHVFINIASLKVYVLPESYEVQNKTLEDIKYVV 182
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GLNNIK+ D++NV + +L V PL+N+F
Sbjct: 183 NPTYTKVDVTKLDKEPLVRWDLGGKKYIPGFVGLNNIKQNDYMNVVVHALAHVAPLKNYF 242
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
++ + + L RF L RKIW+ R FK VSPHE LQ + S KRF + +QS+PV
Sbjct: 243 MLED--LSSRPELAQRFSILVRKIWNPRAFKSHVSPHELLQEISLRSSKRFTLTIQSDPV 300
Query: 281 EFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD 338
+F+SW +N LH L TK TSII + FQG L+V + TI+ +++ +
Sbjct: 301 DFLSWFINNLHLSLGGSKTKPGTSIIQKVFQGRLKVESQ----TITARADASDRLR--FE 354
Query: 339 DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ I + R F+ML LDLPP P+FKD +KNIIPQ+
Sbjct: 355 EAAEIKMDIVR--FMMLTLDLPPKPIFKDEQDKNIIPQV 391
>gi|342878492|gb|EGU79829.1| hypothetical protein FOXB_09688 [Fusarium oxysporum Fo5176]
Length = 538
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 189/306 (61%), Gaps = 46/306 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSL+ HHVYIN
Sbjct: 83 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLDEDHHVYIN 142
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T++VY LP+GYE+ +L+DI++V G
Sbjct: 143 LETQRVYVLPEGYEVKSRALDDIKYVSDPRYSKKEVIEMDRTPHTSYTLDRKEYIPGFVG 202
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK+ D++NV +Q+L V PLRN+ L+ E++ + K+ LV R L RKIW+ R FK
Sbjct: 203 MNNIKDNDYLNVIVQALAHVAPLRNYLLL-EDFSN-KTELVKRCSILVRKIWNPRAFKAH 260
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PV+F+SW LN LH L TK +S+I FQG+
Sbjct: 261 VSPHELLQEISLRSNKRFTLTTQSDPVDFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQGK 320
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
++V + D+ + +D + + R FL+L LDLP PLF+D +EK
Sbjct: 321 MKVESQAITARADATDRLRFEDAD-------VKVDIVR--FLLLTLDLPSAPLFQDELEK 371
Query: 372 NIIPQL 377
NIIPQ+
Sbjct: 372 NIIPQV 377
>gi|322703747|gb|EFY95351.1| U4/U6.U5 tri-snRNP-associated protein 2 [Metarhizium anisopliae
ARSEF 23]
Length = 544
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 189/306 (61%), Gaps = 45/306 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++RQVLDFDFEK CS+SLSN+NVYACLVCGKY+QGRG KSHAY H+L+ HHV+IN
Sbjct: 81 YLDTIDRQVLDFDFEKLCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALDEDHHVFIN 140
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L T+KVY LP+GYE+ SL+DI++V G
Sbjct: 141 LETQKVYVLPEGYEVKSKSLDDIKYVSDPRYTKREVMSLDRAHHKSWTLAGKEYTPGFVG 200
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +Q+L V PLRN+ L+ E++ + LV R L RKIW+ R FK
Sbjct: 201 MNNIKENDYLNVIVQALSHVPPLRNYLLL-EDFTKT-TELVKRCSILFRKIWNPRAFKAH 258
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PVEF+SW LN LH L +K +S+I FQG
Sbjct: 259 VSPHELLQEIALRSNKRFTLTTQSDPVEFLSWFLNNLHLGLGGSKSKPGSSMIQRTFQGR 318
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
L+V + I+ T++ ++ + + R FL+L LDLP PLF+D +E+
Sbjct: 319 LKVESQ----AITARADATDRLR--FEEAAQVKVDIVR--FLLLTLDLPAAPLFQDELER 370
Query: 372 NIIPQL 377
NIIPQ+
Sbjct: 371 NIIPQV 376
>gi|302416643|ref|XP_003006153.1| U4/U6.U5 tri-snRNP-associated protein [Verticillium albo-atrum
VaMs.102]
gi|261355569|gb|EEY17997.1| U4/U6.U5 tri-snRNP-associated protein [Verticillium albo-atrum
VaMs.102]
Length = 549
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/311 (45%), Positives = 188/311 (60%), Gaps = 55/311 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CS+SLSN+NVYACLVCG+Y+QGRG KSHAY H+L+ HHVYIN
Sbjct: 92 YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGRYFQGRGPKSHAYFHALDEDHHVYIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
++T+ VY LP+GYE+ SL+DI++ VG
Sbjct: 152 MQTQNVYVLPEGYEVKSKSLDDIKYVSDPRYTKQEVMELDRRAQPAWTLAGKEYAPGFVG 211
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NN+KE D++NV +Q+L V PLRN+FL+ E++ +S L R L RKIW+ R FK
Sbjct: 212 MNNLKENDYLNVILQALSHVVPLRNYFLL-EDF-SSRSELAKRTSILVRKIWNPRAFKAH 269
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+P+EF+SW LN LH L TK +S+I+ FQG+
Sbjct: 270 VSPHELLQQIALDSNKRFTLTNQSDPIEFLSWFLNNLHLGLGGSKTKPGSSMIHRIFQGK 329
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLPPPPLFK 366
L+V Q +D GD D ++ SR FL+L LDLP PLF+
Sbjct: 330 LKV-----------ESQAITARADAGDRLRFEDAADVHVAVSR--FLLLTLDLPAAPLFQ 376
Query: 367 DVMEKNIIPQL 377
D +NIIPQ+
Sbjct: 377 DENNRNIIPQV 387
>gi|358060680|dbj|GAA93619.1| hypothetical protein E5Q_00263 [Mixia osmundae IAM 14324]
Length = 668
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/339 (44%), Positives = 194/339 (57%), Gaps = 79/339 (23%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR VLDFDFE+ CSVSLS +NVYACLVCG+Y+QGRG+KS AY HS+ HHVYI+
Sbjct: 127 YLDTVNRAVLDFDFERLCSVSLSTINVYACLVCGRYFQGRGEKSQAYAHSIGEDHHVYIS 186
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
L + +VY LPD Y+++DPSL DIR+ VG
Sbjct: 187 LDSLRVYVLPDNYQVHDPSLNDIRYLLQPVFTTSVLTRLDNALLPSYDLAGRAYLPGFVG 246
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLI----------------------------PEN 225
LNNIK +NV +Q+LM V PLR++F++ P
Sbjct: 247 LNNIKANSHMNVVLQALMHVVPLRDYFILNSQPAAQGQISTVPPARDSPMPPSTDPGPSV 306
Query: 226 Y-RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
+ R +S LV RFG L RK+W+ + FK QVSPH+FLQ V AS +F +P+EF+S
Sbjct: 307 FERDQRSELVQRFGTLCRKVWNPKMFKAQVSPHDFLQEVTLASGGKFSTTEPGDPLEFLS 366
Query: 285 WLLNTLHSDLRNT-KKNTSIIYECFQGELEVVKEIPKNTISGNDQN----TEKGSDGGDD 339
WLLN+LH DL + K+++SIIYE FQGE+ + DQ TE+GS+
Sbjct: 367 WLLNSLHRDLGGSRKRSSSIIYEAFQGEVRL-----------EDQAVLVMTEEGSEKPQF 415
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKD-VMEKNIIPQL 377
++ PFL L +DLP PPLF+D V EKNIIPQ+
Sbjct: 416 DLARDIHGTKSPFLFLVIDLPAPPLFQDAVNEKNIIPQV 454
>gi|226292573|gb|EEH47993.1| U4/U6.U5 tri-snRNP-associated protein [Paracoccidioides
brasiliensis Pb18]
Length = 615
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 205/372 (55%), Gaps = 56/372 (15%)
Query: 47 DDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP 106
DD+ ++ D + + G + D+DE+E ++ +++ E D
Sbjct: 52 DDERNGKDILAAADQEEEEIEEGSAHQIPISDEDEEESAVS---APARQTAPTEGYSDL- 107
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ GHHV++N
Sbjct: 108 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDVGHHVFVN 167
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ SL+DI++ VG
Sbjct: 168 METKKVYVLPEGYEVKSSSLDDIKYVVDPQYKKEEVTKLDKVVIDAVDLAGKRYRPGFVG 227
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ L RFG L RK+W+ R FK
Sbjct: 228 MNNIKSNDYLNVIVQVLAHVRPIRNFFLLHRFPTPGTPQLPLRFGILVRKLWNPRAFKSH 287
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L +K+ TS+I+ FQ
Sbjct: 288 VSPHELLQEVALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKRPSPTPTSVIHTAFQ 347
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ +T + PFL+L LDLPP PLF
Sbjct: 348 GHLRI-----------ESQAITARSDAANARLVFSESSSTTSQTTPFLILTLDLPPTPLF 396
Query: 366 KDVMEKNIIPQL 377
+ +++IPQ+
Sbjct: 397 QSTNAESVIPQV 408
>gi|225680871|gb|EEH19155.1| U4/U6.U5 tri-snRNP-associated protein [Paracoccidioides
brasiliensis Pb03]
Length = 615
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 205/372 (55%), Gaps = 56/372 (15%)
Query: 47 DDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP 106
DD+ ++ D + + G + D+DE+E ++ +++ E D
Sbjct: 52 DDERNGKDILAAADQEEEEIEEGSAHQIPISDEDEEESAVS---APARQTAPTEGYSDL- 107
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG KSHAY H+L+ GHHV++N
Sbjct: 108 YLDTIQRSVLDFDFEKQCSVSLSNINVYACLVCGRYYQGRGPKSHAYFHALDVGHHVFVN 167
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ SL+DI++ VG
Sbjct: 168 METKKVYVLPEGYEVKSSSLDDIKYVVDPQYKKEEVTKLDKVVIDAVDLAGKRYRPGFVG 227
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ L RFG L RK+W+ R FK
Sbjct: 228 MNNIKSNDYLNVIVQVLAHVRPIRNFFLLHRFPTPGTPQLPLRFGILVRKLWNPRAFKSH 287
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L +K+ TS+I+ FQ
Sbjct: 288 VSPHELLQEVALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKRPSPTPTSVIHTAFQ 347
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDH----DNITTETSRMPFLMLGLDLPPPPLF 365
G L + Q SD + ++ +T + PFL+L LDLPP PLF
Sbjct: 348 GHLRI-----------ESQAITARSDAANARLVFSESSSTTSQTTPFLILTLDLPPTPLF 396
Query: 366 KDVMEKNIIPQL 377
+ +++IPQ+
Sbjct: 397 QSTNAESVIPQV 408
>gi|302911281|ref|XP_003050458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731395|gb|EEU44745.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 538
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 188/306 (61%), Gaps = 46/306 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG KSHAY HSL+ HHV+IN
Sbjct: 81 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSHAYFHSLDEDHHVFIN 140
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
L T++VY LP+GYE+ +L+DI++ VG
Sbjct: 141 LETQRVYVLPEGYEVKSRALDDIKYVSDPRYTKKEVIEMDRAKRTSYTLDSKEYTPGFVG 200
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D+ NV IQ+L V PLRN+ L+ E++ K+ LV R L RKIW+ R FK
Sbjct: 201 MNNIKENDYFNVVIQALAHVAPLRNYLLL-EDFPD-KTELVKRCSILVRKIWNPRAFKAH 258
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PV+F+SW LN LH L TK +S++ FQG+
Sbjct: 259 VSPHELLQEISLRSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSKTKPGSSMVQRTFQGK 318
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
++V + +D+ + +D + + R FL+L LDLP PLF+D +EK
Sbjct: 319 MKVESQAITARADASDRLRFEDAD-------VKVDVVR--FLLLTLDLPSAPLFQDELEK 369
Query: 372 NIIPQL 377
NIIPQ+
Sbjct: 370 NIIPQV 375
>gi|331223751|ref|XP_003324548.1| hypothetical protein PGTG_05354 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309303538|gb|EFP80129.1| hypothetical protein PGTG_05354 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 715
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/322 (45%), Positives = 192/322 (59%), Gaps = 58/322 (18%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR +LDFDFE+ CSV+LSN+N+YACLVCGKY+QGR + S AY HS+ HHV+IN
Sbjct: 188 YLDTVNRDMLDFDFERLCSVTLSNINIYACLVCGKYFQGRSRTSPAYAHSIGEDHHVFIN 247
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH----------------------------------V 192
L +EKVY LPDGYE++DPSL+DI++ V
Sbjct: 248 LLSEKVYVLPDGYEVSDPSLDDIKYLLNPTFTPGLLRKLDAGSQGPSYDLHAVAYLPGFV 307
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN----YRHCKSPLVHRFGDLTRKIWHAR 248
GLNNIK D++NV + L V P+R++F+ + R S LV RFG L RKIW+ R
Sbjct: 308 GLNNIKANDYLNVIVHLLAHVPPVRDYFVCRSSEGSFERARASELVQRFGTLMRKIWNPR 367
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK---------- 298
FK QVSPHEF Q V S +F + Q++PVEF+ WLLNTLH DL +K
Sbjct: 368 AFKAQVSPHEFGQEVATRSGGKFTLTDQADPVEFLGWLLNTLHRDLGGSKASGRKAVVKA 427
Query: 299 KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM---PFLML 355
K+TSII+ F+G VVK + ++ D G G +I + R+ F+ L
Sbjct: 428 KDTSIIHAAFRG---VVKVEEQEIVAIPD----SGEVGKRPQFDINQDGRRLIESTFMFL 480
Query: 356 GLDLPPPPLFKDVMEKNIIPQL 377
LDLPPPP+F+D ++KNIIPQ+
Sbjct: 481 TLDLPPPPVFQDSVQKNIIPQV 502
>gi|400600854|gb|EJP68522.1| U4/U6.U5 tri-snRNP-associated protein [Beauveria bassiana ARSEF
2860]
Length = 557
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/317 (45%), Positives = 188/317 (59%), Gaps = 61/317 (19%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CS+SLSN+NVYACLVCG+Y+QGRG KSHAY HSL+ HHVYIN
Sbjct: 91 YLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGRYFQGRGPKSHAYFHSLDEDHHVYIN 150
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH----------------------------------- 191
L T+KVY LP+GYE+ +L+DI++
Sbjct: 151 LETQKVYVLPEGYEVRSKALDDIKYVSDPRYTKKEVMELDRPAGGGGGRKKSWTLGGKEY 210
Query: 192 ----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA 247
VG+NNIKE D++NV +Q+L V PLRN+ L+ E++ KS LV R L RKIW+
Sbjct: 211 VPGFVGMNNIKENDYINVIVQALSHVAPLRNYLLL-EDF-SGKSELVKRCSILFRKIWNP 268
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIY 305
R FK VSPHE LQ + S KRF + QS+PV+F+SW LN LH L T+ +S++
Sbjct: 269 RAFKSHVSPHELLQEIALRSNKRFTLTSQSDPVDFLSWFLNNLHIGLGGSKTRPGSSMVQ 328
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD-----DHDNITTETSRMPFLMLGLDLP 360
FQG L+V Q +D GD D ++ + R FL+L LDLP
Sbjct: 329 RAFQGRLKV-----------ESQAITARADVGDRLRFEDAGEVSVDVVR--FLLLTLDLP 375
Query: 361 PPPLFKDVMEKNIIPQL 377
PLF+D +E+NIIPQ+
Sbjct: 376 SAPLFQDELERNIIPQV 392
>gi|426336270|ref|XP_004029623.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Gorilla gorilla
gorilla]
Length = 516
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 148/317 (46%), Positives = 194/317 (61%), Gaps = 35/317 (11%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 189
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
T+ +L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 190 ----------------TVCALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 233
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 234 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 293
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 294 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 347
Query: 361 PPPLFKDVMEKNIIPQL 377
PL+KD E+ IIPQ+
Sbjct: 348 TAPLYKDEKEQLIIPQV 364
>gi|195555380|ref|XP_002077094.1| GD24862 [Drosophila simulans]
gi|194203112|gb|EDX16688.1| GD24862 [Drosophila simulans]
Length = 484
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/316 (44%), Positives = 189/316 (59%), Gaps = 55/316 (17%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CS+SL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
V++NL T + YCLPD YEI D SL+DI++
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVDGVLYL 155
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGD-LTRKIWHA 247
VGLNNIK D+ NV + +L V PLR++FL ++Y H P GD + +W+
Sbjct: 156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVMRPP----GDSVFTLMWNP 211
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKNTSIIYE 306
RNFK VSPHE LQAV+ S KRF+I Q +P++F+SW LNTLH L+ N + N+SI+Y+
Sbjct: 212 RNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYK 271
Query: 307 CFQGELEV-VKEIPK----NTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
F GE+++ ++IP + TE+ D +D + F+ L DLPP
Sbjct: 272 IFLGEMKIYTRKIPPVELDDAAKAKLLATEEYKDQVEDKN----------FIYLTCDLPP 321
Query: 362 PPLFKDVMEKNIIPQL 377
PPLF D +NIIPQ+
Sbjct: 322 PPLFTDEFRENIIPQV 337
>gi|340502777|gb|EGR29429.1| ubiquitin carboxyl-terminal, putative [Ichthyophthirius
multifiliis]
Length = 545
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 195/325 (60%), Gaps = 54/325 (16%)
Query: 91 GQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKS 150
G+ Q+ + E+R+DCPY+ T+ R +LDFDFEK CS+SL+NLNVYACL+CGKYYQGR + +
Sbjct: 80 GKSQQEEITEIRKDCPYISTIKRHMLDFDFEKLCSISLANLNVYACLICGKYYQGRCKNT 139
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------- 191
+AY H+LE HH+YINL KVYCLPD YE+ D SL DI++
Sbjct: 140 NAYLHALETNHHMYINLHNAKVYCLPDNYEVQDQSLNDIKYNLAPTYSQEQIKNLDTLKP 199
Query: 192 --------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH-----CKSP 232
VGLNNIK D+VNV IQ+L RV LR+ ++ N + K+
Sbjct: 200 SSKALNGIDYIPGFVGLNNIKMNDYVNVIIQALCRVPLLRDQIILYNNTVNQDVFDLKTL 259
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L RF +L +KIW+ +NFKGQVSPHE LQA++ S K+F I +QS+P++ + WLLN++
Sbjct: 260 LSKRFSNLIKKIWNPKNFKGQVSPHELLQAIVLKSNKKFNINLQSDPIKLLCWLLNSIQI 319
Query: 293 DLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPF 352
+L++T + +I CF+GE+EV +T K + ++ + M F
Sbjct: 320 ELKDTHF-SDLIENCFKGEVEV--------------HTYKPLQNQIGYSSV-PKIEAMSF 363
Query: 353 LMLGLDLPPPPLFKDVMEKNIIPQL 377
+ L L++PPPPL KD K IP++
Sbjct: 364 IYLTLNIPPPPLHKDDSLKINIPEM 388
>gi|444518815|gb|ELV12403.1| U4/U6.U5 tri-snRNP-associated protein 2 [Tupaia chinensis]
Length = 544
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 190/348 (54%), Gaps = 72/348 (20%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 77 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 132
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 133 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 192
Query: 190 RH---------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
+ VGLNNIK D+ N +Q+L V PL
Sbjct: 193 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 252
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 253 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 312
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
F+I Q + V+F+SW LN LHS L G + K K + ND+
Sbjct: 313 TFQITKQGDGVDFLSWFLNALHSAL--------------GGTKKKKKTEEKEQLLHNDEY 358
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
E + F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 359 QETMVEST--------------FMYLTLDLPTAPLYKDEKEQLIIPQV 392
>gi|299470225|emb|CBN79529.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 516
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 142/304 (46%), Positives = 186/304 (61%), Gaps = 51/304 (16%)
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP 184
S+SLSN NVYACLVCGKY+QGRG+ +HAYTHS++ GHHV+INLRT +VYCLPD YE+ D
Sbjct: 9 SISLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQNGHHVFINLRTCRVYCLPDSYEVVDS 68
Query: 185 SLEDIRH---------------------------------VGLNNIKETDFVNVTIQSLM 211
SLEDI+ VGLNN+K TDFVNV + +L
Sbjct: 69 SLEDIKRALDPRYSPECIAVLDKNTTLSRDQYGVAYLPGFVGLNNLKCTDFVNVVLHALA 128
Query: 212 RVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRF 271
V PLRNFF+ P+NY+ KS LVH FG++ R++W NFK VSPHEF+QAV ASKKRF
Sbjct: 129 HVPPLRNFFVEPDNYKDSKSTLVHAFGEVVRRVWSPSNFKSAVSPHEFIQAVSYASKKRF 188
Query: 272 RIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQG--ELEVVKEIPKNTISGNDQ 328
R GVQS ++F++WLLN+LH L T+K +S++++ FQG E+E + + K + +D+
Sbjct: 189 RPGVQSEAIDFLAWLLNSLHQGLGGTRKAGSSVVFQTFQGLVEVETLTKKKKAILDDDDE 248
Query: 329 NTEKGSDG---------------GDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNI 373
G G D + + + +PFL L LD+P PLFKD NI
Sbjct: 249 EGGGGVGNARGKAGAAAAEDELVGFDEADWDKKKAEVPFLHLTLDIPATPLFKDSQGGNI 308
Query: 374 IPQL 377
IPQ+
Sbjct: 309 IPQI 312
>gi|395334732|gb|EJF67108.1| spindle pole body protein [Dichomitus squalens LYAD-421 SS1]
Length = 530
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 143/328 (43%), Positives = 190/328 (57%), Gaps = 66/328 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVS SN+N+Y CLVCGKY+QGRG+ S+A+ H++ HHV+IN
Sbjct: 53 YLDTINRAVLDFDFEKVCSVSSSNINIYGCLVCGKYFQGRGRNSYAFAHAIHDDHHVFIN 112
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
L T KVY LPDGY ++DPSL+DI
Sbjct: 113 LETTKVYVLPDGYLVSDPSLDDISFVLAPKFTLASVSTLSTPEHLRKPSYDLSNKPYIPG 172
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF 250
++GLNNIK D++NV I SL+ VT LR+ L+ N+R + L+ RF L +K+W+ R F
Sbjct: 173 YIGLNNIKRNDYMNVVIHSLLHVTTLRDHLLL-SNFRGKEPELLKRFAGLAKKMWNPRLF 231
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS-------- 302
K QVSPHEFLQ V +AS +F + Q +P++F+ WLLN LH D+ TKK S
Sbjct: 232 KSQVSPHEFLQEVNRASAGKFSLEKQGDPIDFLGWLLNHLHKDMGGTKKKNSSWSSGRRY 291
Query: 303 -----------IIYECFQGE--LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
+I+ FQGE +E + + + GN++ D I + S
Sbjct: 292 CGPPNDLLLIGVIFSTFQGEVRMETQQVLVRPDTGGNEKPR------FDIDREIKSNVS- 344
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
PFL L +DLPPPPLF+D +EKNIIPQ+
Sbjct: 345 -PFLFLAVDLPPPPLFQDAVEKNIIPQV 371
>gi|260830804|ref|XP_002610350.1| hypothetical protein BRAFLDRAFT_120059 [Branchiostoma floridae]
gi|229295715|gb|EEN66360.1| hypothetical protein BRAFLDRAFT_120059 [Branchiostoma floridae]
Length = 464
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 197/345 (57%), Gaps = 66/345 (19%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R D ED++ + G G RSR CPYLDT+NR +LDFDFEK CSVSLS
Sbjct: 7 RKYSDSSEDEENEPTRRVRG-GSDARSR------HCPYLDTINRSLLDFDFEKLCSVSLS 59
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
+LNVYACLVCGKY+QGRG+KSHAYTHS++ HHV++NL T K YCLPD YE+ D SL+DI
Sbjct: 60 HLNVYACLVCGKYFQGRGRKSHAYTHSVQVDHHVFLNLHTLKFYCLPDNYEVIDSSLDDI 119
Query: 190 RH---------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
++ VGLNNIK D+ NV +Q+L V+PL
Sbjct: 120 KYVLNPTFKTDHIQQLDGSSKLSRAYDSTMYLPGIVGLNNIKANDYCNVVLQALSHVSPL 179
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
R++FL ENY+ K P +V RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 180 RDYFLQEENYKDIKRPPGDIMFLIVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 239
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS-------IIY--------ECFQGELE- 313
RF+I Q +P++F+SW LN +H+ + KK S +Y FQ E E
Sbjct: 240 RFQITEQGDPIDFLSWFLNAMHASMGGNKKVMSKTVTTSPFMYLTLDLPPPPLFQDEYEQ 299
Query: 314 -VVKEIP-KNTISGNDQNTEKGSDGGDDHDNITTETSRM-PFLML 355
++ ++P N ++ + EK D E +R+ P+L+L
Sbjct: 300 NIIPQVPLANLLAKFNGEAEKEYKSYKDSTLKRFELTRLPPYLIL 344
>gi|328859895|gb|EGG09003.1| hypothetical protein MELLADRAFT_84272 [Melampsora larici-populina
98AG31]
Length = 698
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 192/343 (55%), Gaps = 84/343 (24%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDFE+ CSV+LSN+N+YACLVCGKY+QGR + S AY HS+ + HHV+IN
Sbjct: 188 YLDTINRDMLDFDFERLCSVTLSNINIYACLVCGKYFQGRSKISPAYAHSIGSDHHVFIN 247
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH----------------------------------V 192
L +EKVY LPDGYE++DPSL+DI++ V
Sbjct: 248 LLSEKVYVLPDGYEVSDPSLDDIKYLLNPTFTPEFLNRLDTGLYPVAYDLQGISYLPGFV 307
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLTRKIWH 246
GLNNIK D++NV +Q L VTPLR++ + C+ P LV RFG L RK+W+
Sbjct: 308 GLNNIKANDYLNVIVQILSHVTPLRDYLI-------CRKPTSNDTELVKRFGTLMRKLWN 360
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL------------ 294
+ FK QVSPHEF Q V K S ++F++ Q++P+EF+ WLLNTLH DL
Sbjct: 361 PKAFKSQVSPHEFGQEVSKRSNRKFKLTEQADPLEFLGWLLNTLHLDLGGHQKKPMKKKH 420
Query: 295 --------------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
+ +SII F+GE+ I ++ I EKG
Sbjct: 421 MKLKNEGNPQESDQMIKKVEEEKDEPSSIIDAAFRGEV----RIEEHDILARPDTGEKGL 476
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
D T + PFL L +DLPPPP+F+D +EKNIIPQ+
Sbjct: 477 KPIFDL-GAEVRTIQTPFLFLTIDLPPPPVFQDTIEKNIIPQI 518
>gi|392573685|gb|EIW66824.1| hypothetical protein TREMEDRAFT_34460 [Tremella mesenterica DSM
1558]
Length = 540
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 191/329 (58%), Gaps = 54/329 (16%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
RRD YLDT+ RQ LDFDFE+ CS SLSN+NVYACLVCGKY+QGRG+ S AY H++ H
Sbjct: 69 RRDM-YLDTIARQNLDFDFERLCSKSLSNINVYACLVCGKYFQGRGRGSWAYRHAVGDNH 127
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRHV----------------------------- 192
V++NL TEK Y LP+GY ++DPSL DI HV
Sbjct: 128 RVWLNLSTEKFYVLPEGYLVSDPSLNDIIHVLNPKYKSSDLAALSKLPSPCFTLNSTLYL 187
Query: 193 ----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN--YRHCKSP--LVHRFGDLTRKI 244
GLNNIK D++NV + L+ V P+RNF L P + + P LV R L +++
Sbjct: 188 PGYIGLNNIKHNDYLNVILHLLLHVPPVRNFLLDPATPALKEDRRPTELVQRLSTLCKRL 247
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSI 303
W+ + FK Q+SPHEFLQ V K S +F++ Q +PVEF+ WL+NTLH DL TKK N+S+
Sbjct: 248 WNPQLFKAQISPHEFLQEVAKRSAGKFKMTEQGDPVEFLGWLVNTLHRDLGGTKKRNSSV 307
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPP 363
IY FQG++ +I + + + D G D +++ PFL L LDLPP P
Sbjct: 308 IYSTFQGKV----QIETQQVITHKEYARPVFDIGRDIQTVSS-----PFLFLALDLPPTP 358
Query: 364 LFKDVMEKNIIPQ------LQRLSGHMWQ 386
LF D+ EK IIPQ L + G M Q
Sbjct: 359 LFTDLNEKKIIPQVPLSTILAKFDGKMTQ 387
>gi|452819224|gb|EME26289.1| ubiquitin thiolesterase/ zinc ion binding protein [Galdieria
sulphuraria]
Length = 451
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 191/310 (61%), Gaps = 51/310 (16%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R+CPY+DT++R VLDFD+EK C V+L NVYACLVCGKY+QGRG K+ A+ H++E HH
Sbjct: 17 RECPYMDTIDRTVLDFDYEKLCCVTLERHNVYACLVCGKYFQGRGPKTPAFAHAIEYDHH 76
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
++I+L TEKVYCLP+ Y++ DP+LEDI+ V
Sbjct: 77 LFIHLETEKVYCLPENYQVVDPTLEDIKAVLNPRLDKAQVEELDKRIVKFRTLEGKIRYQ 136
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--CKSPLVHRFGDLTRKIWHA 247
G++N++ TD++NV +Q+L+R+ PLR+FFL+ + + + PL+ FG+ RK W+
Sbjct: 137 GVLGMSNLQATDYINVILQALVRIKPLRDFFLLYQMDKQDTIEHPLIASFGEFMRKFWNP 196
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYEC 307
R F+ Q+SPHE +Q ++K SKKRF I Q NPVEF++W L++L DL + ++
Sbjct: 197 RPFRSQISPHELVQEIVKRSKKRFPILQQGNPVEFLAWFLHSLQDDLMRAGQK-PLMKNT 255
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
F+G++E+ T N EK S D+ ++ FL L L+LPP PLFKD
Sbjct: 256 FEGQMEI------ETFQAN----EKSSQQLIKKDHKLSQ-----FLFLSLELPPMPLFKD 300
Query: 368 VMEKNIIPQL 377
+E+N+IPQ+
Sbjct: 301 SLERNMIPQV 310
>gi|453081855|gb|EMF09903.1| U4/U6.U5 tri-snRNP-associated protein 2 [Mycosphaerella populorum
SO2202]
Length = 547
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/310 (44%), Positives = 185/310 (59%), Gaps = 54/310 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R LDFDFEK CS++LSN+NVYACLVCGKY+ GRG K+ AY H+LE GHHVYIN
Sbjct: 93 YLDTIARSRLDFDFEKLCSITLSNINVYACLVCGKYFSGRGAKTPAYFHALEEGHHVYIN 152
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR---------------------------------HVG 193
+ T+KVY LP+GYE+ + SL+DI+ VG
Sbjct: 153 METKKVYVLPEGYEVKNKSLDDIKVVVDPRFTLEEVKAMDREPKPQWDLLGRKYIPGFVG 212
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNNIK D++NV +Q+L VTPLRNF ++ + + LV RF L RK+W+ + FK
Sbjct: 213 LNNIKANDYLNVVVQALSHVTPLRNFLMLED--LSSRPELVKRFSVLVRKMWNPKAFKKH 270
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE +Q + S K+F + Q++PV+F+SW LN LH L TK +SII + FQG
Sbjct: 271 VSPHELIQNISLQSGKKFSLTEQADPVDFLSWFLNNLHLALGGSKTKPKSSIIQKIFQGA 330
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLMLGLDLPPPPLFKD 367
L+V Q +D GD + I ++ SR +++L LDLP PLF+D
Sbjct: 331 LKV-----------ESQEISARADAGDRLRFEDTAIKSQQSR--YMILTLDLPAAPLFQD 377
Query: 368 VMEKNIIPQL 377
+EKNIIPQ+
Sbjct: 378 DVEKNIIPQV 387
>gi|452837730|gb|EME39672.1| hypothetical protein DOTSEDRAFT_75352 [Dothistroma septosporum
NZE10]
Length = 543
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/310 (44%), Positives = 187/310 (60%), Gaps = 54/310 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSV+LSN+NVYACLVCGKY+ GRG K+ AY H+LE HHV+IN
Sbjct: 88 YLDTISRTRLDFDFEKLCSVTLSNINVYACLVCGKYFSGRGPKTPAYFHALEENHHVFIN 147
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR---------------------------------HVG 193
+ T+KVY LP+GYE+ + SL+DI+ VG
Sbjct: 148 METKKVYVLPEGYEVKNNSLDDIKVVVDPRFSQEEIKALDKEPTPQWDLLGRRYIPGFVG 207
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNNIK D++NV +Q+L V PLR+F ++ + + LV RF + RKIW+ ++FK
Sbjct: 208 LNNIKANDYLNVVVQALSHVRPLRDFLMLED--LSSRPELVKRFSVMVRKIWNPKSFKSH 265
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE +Q + S K+F + Q++PV+F+SW LN LH L TK +S++ + FQG
Sbjct: 266 VSPHELIQEIALRSNKKFLLTEQADPVDFLSWFLNNLHLALGGSKTKPRSSLVQKIFQGS 325
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGD----DHDNITTETSRMPFLMLGLDLPPPPLFKD 367
L V Q +D GD + +I ++TS PF++L LDLPP PLF+D
Sbjct: 326 LRV-----------ESQAISARADAGDRLRFEDADIKSQTS--PFMILTLDLPPAPLFQD 372
Query: 368 VMEKNIIPQL 377
+EKNIIPQ+
Sbjct: 373 DVEKNIIPQV 382
>gi|405123054|gb|AFR97819.1| biquitin thiolesterase/zinc ion binding protein [Cryptococcus
neoformans var. grubii H99]
Length = 562
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 213/397 (53%), Gaps = 69/397 (17%)
Query: 26 SSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDED--- 82
S P+ R+ + +PL++ + E + + + T D++ DE+
Sbjct: 10 SPPAAKRIKLDTEGVPLSSPLKSQQDPSELPPATSAPEILSASTFTPPVDEDISDEEGLE 69
Query: 83 ----EDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLV 138
E+DL RRD YLDT++RQ LDFDFEK CS SLSN+NVYACLV
Sbjct: 70 DVKEEEDLT--------------RRDM-YLDTISRQSLDFDFEKLCSKSLSNINVYACLV 114
Query: 139 CGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------ 192
CGKY+QGRG+ S AY H++ H V++NL TEK Y LP+GY ++DPSL DI V
Sbjct: 115 CGKYFQGRGKGSWAYRHAVGDNHRVWLNLDTEKFYVLPEGYPVSDPSLNDILRVLHPRYN 174
Query: 193 ---------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN 225
G+NNIK+ D+ NV I L+ V PLRNF L P
Sbjct: 175 ASDIKALSALPAPSYTLSGQQYTPGFIGVNNIKKNDYCNVVIHLLLHVPPLRNFLLNPNT 234
Query: 226 --YRHCKSP--LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
+ + P LV RF L R++W++ FK Q+SPHEFLQ V K S +F+ Q +PVE
Sbjct: 235 PELQEERRPTELVKRFATLARRLWNSHLFKSQISPHEFLQEVSKRSNGKFKTTEQGDPVE 294
Query: 282 FMSWLLNTLHSDLRNTKK-NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDH 340
+ WL+NTLH DL +KK N+SIIY FQG++++ + + + + D G D
Sbjct: 295 LLGWLVNTLHRDLGGSKKRNSSIIYSTFQGKVQIETQ----QVIVHKEYARPVFDIGRDI 350
Query: 341 DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
I++ PFL L LDLP PLF D+ EK IIPQ+
Sbjct: 351 QTISS-----PFLFLALDLPITPLFTDMNEKKIIPQV 382
>gi|327287130|ref|XP_003228282.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Anolis
carolinensis]
Length = 463
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 186/312 (59%), Gaps = 48/312 (15%)
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
L V + VLDFDFEK CS+SLS++NVYACLVCGKY+QGRG KSHAY HS++ HHV++NL
Sbjct: 5 LTNVLKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNL 64
Query: 168 RTEKVYCLPDGYEINDPSLEDIRHV---------------------------------GL 194
T K YCLPD YEI D SLEDI +V GL
Sbjct: 65 HTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIANLDKQAKLSRAYDGTTYLPGIVGL 124
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHA 247
NNIK D+ N +Q+L V PLRN+FL ENY++ K P LV RFG+L RK+W+
Sbjct: 125 NNIKANDYANAVLQALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNP 184
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYE 306
RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK +I+ +
Sbjct: 185 RNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTD 244
Query: 307 CFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
FQG + + K++P + ++ E+ + + + T F+ L LDLP PL+
Sbjct: 245 VFQGSMRIFTKKLPHPDLPAEEK--EQLLQNEEYQEKMVEST----FMYLTLDLPTAPLY 298
Query: 366 KDVMEKNIIPQL 377
KD E+ IIPQ+
Sbjct: 299 KDEKEQLIIPQV 310
>gi|355565860|gb|EHH22289.1| hypothetical protein EGK_05524 [Macaca mulatta]
Length = 565
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 198/345 (57%), Gaps = 51/345 (14%)
Query: 78 DKDEDEDDLANGYGQGQRSRLVEVRRDCP---YLDTVNRQVLDFDFEKFCSVSLSNLNVY 134
+++ DED + + R+ R P +L R VLDFDFEK CS+SLS++N Y
Sbjct: 75 EREVDEDSEPEREVRAKNGRVDSEDRRSPHTCFLFCFLRSVLDFDFEKLCSISLSHINAY 134
Query: 135 ACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV-- 192
ACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 135 ACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLK 194
Query: 193 -------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
GLNNIK D+ N +Q+L V PLRN+FL
Sbjct: 195 PTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFL 254
Query: 222 IPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
+NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I
Sbjct: 255 EEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQIT 314
Query: 275 VQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEK 332
Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P + ++ +
Sbjct: 315 KQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK---E 371
Query: 333 GSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 372 QLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 413
>gi|58264574|ref|XP_569443.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109995|ref|XP_776383.1| hypothetical protein CNBC5990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259057|gb|EAL21736.1| hypothetical protein CNBC5990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225675|gb|AAW42136.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 562
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 187/315 (59%), Gaps = 48/315 (15%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
RRD YLDT++RQ LDFDFEK CS SLSN+NVYACLVCGKY+QGRG+ S AY H++
Sbjct: 78 TRRDM-YLDTISRQSLDFDFEKLCSKSLSNINVYACLVCGKYFQGRGKGSWAYRHAVGDN 136
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHV---------------------------- 192
H V++NL TEK Y LP+GY ++DPSL DI V
Sbjct: 137 HRVWLNLDTEKFYVLPEGYPVSDPSLNDILRVLHPRYNASDIKALSTLPAPSYTLSGQQY 196
Query: 193 -----GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN--YRHCKSP--LVHRFGDLTRK 243
G+NNIK+ D+ NV I L+ V PLRNF L P+ + + P LV RF L R+
Sbjct: 197 TPGFIGVNNIKKNDYCNVVIHLLLHVPPLRNFLLNPDTPELQDDRRPTELVKRFATLARR 256
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTS 302
+W++ FK Q+SPHEFLQ V K S +F+ Q +PVE + WL+NTLH DL +KK N+S
Sbjct: 257 LWNSHLFKSQISPHEFLQEVSKRSNGKFKTTEQGDPVELLGWLVNTLHRDLGGSKKRNSS 316
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
IIY FQG++++ + + + + D G D I++ PFL L LDLP
Sbjct: 317 IIYSTFQGKVQIETQ----QVIVHKEYARPVFDIGRDIQTISS-----PFLFLALDLPIT 367
Query: 363 PLFKDVMEKNIIPQL 377
PLF D+ EK IIPQ+
Sbjct: 368 PLFTDMNEKKIIPQV 382
>gi|198420341|ref|XP_002120475.1| PREDICTED: zinc finger (ubiquitin thiolesterase type)-4, partial
[Ciona intestinalis]
gi|93003316|tpd|FAA00241.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 296
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 174/293 (59%), Gaps = 55/293 (18%)
Query: 50 DEEEEYGGRGDSGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLD 109
DEE E + ++ + + +D+ E +E + V+ R CPYLD
Sbjct: 19 DEETEVKKKSETSSDNLVEAYSSDDEYEHLNEPK---------------VDRSRSCPYLD 63
Query: 110 TVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRT 169
T+NR VLDFDFEK CSVSLS+LNVYACLVCGKY+QGRG+KSHAYTHS+E HHV++NL T
Sbjct: 64 TINRSVLDFDFEKLCSVSLSHLNVYACLVCGKYFQGRGRKSHAYTHSVECNHHVFLNLYT 123
Query: 170 EKVYCLPDGYEINDPSLEDIRH---------------------------------VGLNN 196
K YCLPD Y I D SLEDI + VGLNN
Sbjct: 124 LKFYCLPDNYMIVDSSLEDITYVLNPTFTKKHIKQLLNDSKLMRAYDGTTYLPGIVGLNN 183
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARN 249
IK D+ NV +Q+L V PLRN+FL +NY H K P L RFG+L RK+W+ RN
Sbjct: 184 IKANDYCNVILQALSHVPPLRNYFLREQNYSHIKRPPGDIMILLSQRFGELIRKLWNPRN 243
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
FK VSPHE LQ+++ S+KRF+I Q +P++ ++W LN+++ L +KK TS
Sbjct: 244 FKAHVSPHEMLQSIVLCSRKRFQITKQGDPLDLLTWFLNSMNVALNGSKKRTS 296
>gi|156053570|ref|XP_001592711.1| hypothetical protein SS1G_05632 [Sclerotinia sclerotiorum 1980]
gi|154703413|gb|EDO03152.1| hypothetical protein SS1G_05632 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 541
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 198/347 (57%), Gaps = 77/347 (22%)
Query: 81 EDEDDLANGYGQGQRS----RLVEVRRDCP-------YLDTVNRQVLDFDFEKFCSVSLS 129
EDE+DL NG + ++V R P YLDT+NR VLDFDFEK CS+SLS
Sbjct: 59 EDEEDLKNGMEDLEVEDEELKVVVPREKAPMEGYDDLYLDTINRSVLDFDFEKLCSISLS 118
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
N+NVYACL SHAY H+LE GHHV+IN++T+KVY LP+GYE+ + SL+DI
Sbjct: 119 NINVYACL------------SHAYFHALEVGHHVFINMQTQKVYVLPEGYEVKNKSLDDI 166
Query: 190 RHV---------------------------------GLNNIKETDFVNVTIQSLMRVTPL 216
+ V G+NNIK+ D+ NV IQ+L V PL
Sbjct: 167 KFVSDPTYTKEQVMAMDREAKTSWTLSGKEYIPGFVGMNNIKDNDYFNVIIQALSHVPPL 226
Query: 217 RNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
RNFFL+ E++R+ K L+ R L RKIW+ R FK VSPHE LQ + S K+F + Q
Sbjct: 227 RNFFLL-EDFRN-KPELIKRVSILFRKIWNPRAFKSHVSPHELLQEISLKSNKKFNLTTQ 284
Query: 277 SNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
S+PV+F+SW LN LH L TK +S+I + FQG+L+V Q +
Sbjct: 285 SDPVDFLSWFLNNLHLALGGSKTKPGSSVIQKIFQGKLKV-----------ESQAITAKA 333
Query: 335 DGGD----DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
D GD + ++ T+ SR F++L LDLP PLF+D +E+NIIPQ+
Sbjct: 334 DAGDRLRFEDADVKTDVSR--FMLLTLDLPAAPLFQDELERNIIPQI 378
>gi|406700486|gb|EKD03653.1| ubiquitin hydrolase [Trichosporon asahii var. asahii CBS 8904]
Length = 531
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 179/313 (57%), Gaps = 47/313 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTV+R LDFDFE+ CS SLSN+NVY CLVCGKY+QGRG+ S AY H++ H V++N
Sbjct: 68 YLDTVSRANLDFDFERLCSKSLSNINVYCCLVCGKYFQGRGRGSWAYRHAVGENHRVWLN 127
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L TEK Y LP+GY ++DPSL DI HV G
Sbjct: 128 LATEKFYVLPEGYLVSDPSLNDILHVLNPRFEAASLAGLSDLRPPSLTLEKREYLPGYVG 187
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----LVHRFGDLTRKIWHARN 249
LNN+K D++NV Q L+ V P+RNFFL P + +S LV R LTR++W+ R
Sbjct: 188 LNNMKANDYLNVITQMLLHVPPIRNFFLNPNTPQLQESARPTELVSRLAALTRRLWNPRL 247
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECF 308
FK QVSPHEF V K S +F Q +PVEF+ WL+NTLH DL T K+N+S+IY F
Sbjct: 248 FKAQVSPHEFFHEVTKRSNGKFTTIEQGDPVEFLGWLINTLHRDLGGTRKRNSSVIYTTF 307
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
QG++++ + I+ D + D E PFL L LDLP PLF+D
Sbjct: 308 QGKVQIETQ---KIITHKDYARPVFEESRD------IERMSSPFLFLALDLPATPLFQDA 358
Query: 369 MEKNIIPQLQRLS 381
EK IIPQ+ S
Sbjct: 359 NEKKIIPQVSLAS 371
>gi|402085602|gb|EJT80500.1| U4/U6.U5 tri-snRNP-associated protein 2 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 599
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 184/327 (56%), Gaps = 67/327 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG +SHAY H+L+ HHV+IN
Sbjct: 123 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPRSHAYFHALDDDHHVFIN 182
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH----------------------------------V 192
++T+KVY LP+GYE+ SL+DI++ V
Sbjct: 183 MQTQKVYVLPEGYEVLSSSLDDIKYVSDPRYTRAEVAALDRRRAAPAWTLAGREYAPGFV 242
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------------NYRHCKSPLVHRFG 238
G+NNIKE D+VNV +Q+L V PLRNF L+ + N + LV R
Sbjct: 243 GMNNIKENDYVNVVVQALAHVPPLRNFLLLEDLGGGGGGGGGGGNNNNSSQTAELVRRCS 302
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RN 296
L RKIW+ R FK VSPHE LQ V S KRF + QS+PV+F+SW LN LH L
Sbjct: 303 TLMRKIWNPRAFKAHVSPHELLQEVSLLSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSR 362
Query: 297 TKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDD---HDNITTETSRMPFL 353
T+ +S++ FQG ++V Q +D D D + PFL
Sbjct: 363 TRPGSSMVQRVFQGRVKV-----------ESQAITAKADAFDRLRFEDAAEVKVDVGPFL 411
Query: 354 MLGLDLPPPPLFK---DVMEKNIIPQL 377
+L LDLPP PLF+ D E++IIPQ+
Sbjct: 412 LLTLDLPPAPLFQGGGDDEERSIIPQV 438
>gi|74207475|dbj|BAE39991.1| unnamed protein product [Mus musculus]
Length = 336
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 162/268 (60%), Gaps = 44/268 (16%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 73 REREADEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 128
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI
Sbjct: 129 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDI 188
Query: 190 RH---------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
+ VGLNNIK D+ N +Q+L V PL
Sbjct: 189 TYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPL 248
Query: 217 RNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
RN+FL +NY++ K P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK
Sbjct: 249 RNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK 308
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNT 297
F+I Q + V+F+SW LN LHS L T
Sbjct: 309 TFQITKQGDGVDFLSWFLNALHSALGGT 336
>gi|403343237|gb|EJY70942.1| U4/U6.U5 tri-snRNP-associated protein 2 [Oxytricha trifallax]
Length = 497
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/308 (44%), Positives = 182/308 (59%), Gaps = 45/308 (14%)
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
+LDFD EK CSV+LSNLN+Y+CL CGKYYQG+G+ + AY HSLE H+V+INL+ KV+C
Sbjct: 1 MLDFDLEKQCSVTLSNLNIYSCLTCGKYYQGKGKTTQAYIHSLEQQHNVFINLQDSKVWC 60
Query: 175 LPDGYEINDPSLEDIRH---------------------------------VGLNNIKETD 201
LPD YE++D +L DI++ +GLNN+K+TD
Sbjct: 61 LPDNYEVDDAALNDIKYNLIPLYNQQLVDKLDSEPMIARALDGTQFYPGSLGLNNLKQTD 120
Query: 202 FVNVTIQSLMRVTPLRNFFLI----PENYRHC--KSPLVHRFGDLTRKIWHARNFKGQVS 255
FVNV IQSL RV PLR++ L EN K LV +F +L +KIW+ +NFKG VS
Sbjct: 121 FVNVIIQSLCRVKPLRDYCLFYNIHSENLSMADQKHLLVVKFAELIKKIWNPKNFKGHVS 180
Query: 256 PHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-----TSIIYECFQG 310
PHE LQA+ AS+KRF+IG Q +P++ +SWLLNT + DL + +K ++I + FQG
Sbjct: 181 PHELLQAISLASQKRFKIGEQKDPIQLLSWLLNTFNEDLHSQQKQKKLKGLNMIEKTFQG 240
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHD-NITTETSRMPFLMLGLDLPPPPLFKDVM 369
ELE+ IPK N N S D D + + F L LDLP PLFK+
Sbjct: 241 ELEISSLIPKGKQDANFLNKLAVSKTNMDTDVQYEMKNQKTKFFFLALDLPTIPLFKEQN 300
Query: 370 EKNIIPQL 377
+ IPQ+
Sbjct: 301 QLAAIPQI 308
>gi|281212512|gb|EFA86672.1| SAP DNA-binding domain-containing protein [Polysphondylium pallidum
PN500]
Length = 494
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/260 (47%), Positives = 165/260 (63%), Gaps = 42/260 (16%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
RRDCPYLDTVNR VLDFDFEK CSVS NLN+YACLVCGK +QG+ SHA+ H +++
Sbjct: 101 ARRDCPYLDTVNRTVLDFDFEKSCSVSFVNLNIYACLVCGKKFQGKSPGSHAHYHCMQSN 160
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRH----------------------------- 191
HHV+INL +K+YCLPD YE+ D SL+DI++
Sbjct: 161 HHVFINLHNQKIYCLPDDYEVVDSSLDDIKYLVNPTFTKEQIALFDKSTKYSRALDGTSY 220
Query: 192 ----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA 247
+GLNNIK+ ++NV IQSL RV+ +RN+F+ +N ++CKS LV+ FG+L RKIW+
Sbjct: 221 LPGFIGLNNIKKNSYINVVIQSLARVSMIRNYFINQDNLKNCKSALVNNFGELLRKIWNP 280
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--------RNTKK 299
RNFKG VSPHE ++ V AS RF I +S+P+EF+ W LN+L DL +
Sbjct: 281 RNFKGHVSPHELIRVVQSAS-TRFTISNESDPLEFLQWFLNSLSYDLNVMNGVDTKQQNS 339
Query: 300 NTSIIYECFQGELEVVKEIP 319
N++II + F GE+++ P
Sbjct: 340 NSNIIQQAFSGEIQLTVTPP 359
>gi|83769188|dbj|BAE59325.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 599
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 180/293 (61%), Gaps = 30/293 (10%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY H LE GHHV+IN
Sbjct: 111 YLDTINREILDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHGLEVGHHVFIN 170
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNV-----------------TIQS 209
+ T+KVY LP+GYE+ + SL+DI++V + + + + +Q
Sbjct: 171 MGTKKVYVLPEGYEVKNKSLDDIKYVVDPHYSKEEVSKLDKEVHDAFDLAGNRYRPVVQL 230
Query: 210 LMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
L V P+RN+FL+ E L RF L RK+W+ + F+ VSPHE LQ + S K
Sbjct: 231 LAHVFPIRNYFLLHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSK 290
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQGELEVVKEIPKNTISG 325
RF + QS+PVEF+SW LN LH L +KK TS++ FQG L + E T
Sbjct: 291 RFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRI--ESQAITAHS 348
Query: 326 NDQNTE-KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ QN ++ GD I ++T+ PFL+L LDLPP PLF+ ++IIP +
Sbjct: 349 DTQNARLVFTESGD----IKSQTT--PFLILTLDLPPTPLFQSANRESIIPHV 395
>gi|401882743|gb|EJT46987.1| ubiquitin hydrolase [Trichosporon asahii var. asahii CBS 2479]
Length = 531
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 178/313 (56%), Gaps = 47/313 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTV+R LDFDFE+ CS SLSN+NVY CLVCGKY+QGRG+ S AY H++ H V++N
Sbjct: 68 YLDTVSRANLDFDFERLCSKSLSNINVYCCLVCGKYFQGRGRGSWAYRHAVGENHRVWLN 127
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
L TEK Y LP+GY ++DPSL DI HV G
Sbjct: 128 LATEKFYVLPEGYLVSDPSLNDILHVLNPRFEAASLAGLSDLRPPSLTLEKREYLPGYVG 187
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP----LVHRFGDLTRKIWHARN 249
LNN+K D++NV Q L+ V P+RNFFL P + +S LV R LTR++W+ R
Sbjct: 188 LNNMKANDYLNVITQMLLHVPPIRNFFLNPNTPQLQESARPTELVSRLAALTRRLWNPRL 247
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECF 308
FK QVSPHEF V K S +F Q +PVEF+ WL+NTLH L T K+N+S+IY F
Sbjct: 248 FKAQVSPHEFFHEVTKRSNGKFTTIEQGDPVEFLGWLINTLHRGLGGTRKRNSSVIYTTF 307
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
QG++++ + I+ D + D E PFL L LDLP PLF+D
Sbjct: 308 QGKVQIETQ---KIITHKDYARPVFEESRD------IERMSSPFLFLALDLPATPLFQDA 358
Query: 369 MEKNIIPQLQRLS 381
EK IIPQ+ S
Sbjct: 359 NEKKIIPQVSLAS 371
>gi|290974377|ref|XP_002669922.1| predicted protein [Naegleria gruberi]
gi|284083475|gb|EFC37178.1| predicted protein [Naegleria gruberi]
Length = 477
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 134/315 (42%), Positives = 192/315 (60%), Gaps = 47/315 (14%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
+CPYLDT+NR+VLDFDFEK CS +LSN NVY CLV GK+++G+G+ + AY HSL HH+
Sbjct: 43 ECPYLDTINRKVLDFDFEKVCSETLSNTNVYCCLVDGKFFKGKGESTPAYIHSLNEDHHL 102
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIRH-------------------------------- 191
++++ K+YCLPD YE+ND SLEDI+
Sbjct: 103 FMSISNGKIYCLPDNYEVNDKSLEDIKFNLNPTYSEKDVEELDIQLKTVTSISNGATFMP 162
Query: 192 --VGLNNIKE-TDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSPLVHRFGDLTRKIWHA 247
VGLN+IK+ TD +NV IQ+L R+ P+R+FFL+ + N KS V F +L RKIW+
Sbjct: 163 GFVGLNSIKQSTDGINVAIQALTRIKPVRDFFLLDQKNLSKVKSRSVLLFSELLRKIWNP 222
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR-NTKKNTSIIYE 306
+NFK V+P EF+Q+++ ++ K+F++G +PV+F +WLLN LH +L N K SII E
Sbjct: 223 KNFKNHVNPLEFVQSIL-SNAKQFKLGESIDPVQFFTWLLNYLHGELTDNQPKQKSIISE 281
Query: 307 CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFK 366
F+G + + ++ K SG G+D + TT + PF+ L LD+P P+FK
Sbjct: 282 SFRGRITITSKVIKRKKSG-------GADKKQVEE--TTSQNTTPFMFLTLDVPSAPIFK 332
Query: 367 DVMEKNIIPQLQRLS 381
D E+NI+PQ+ S
Sbjct: 333 DEYERNILPQVSLFS 347
>gi|145507031|ref|XP_001439476.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406660|emb|CAK72079.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/317 (42%), Positives = 181/317 (57%), Gaps = 54/317 (17%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE 158
V+ + CPY+ T+ R +LDFDFEK CSV+LSNLNVY CL+CGKYYQG+ + AY HSLE
Sbjct: 9 VKYNQQCPYIATICRHMLDFDFEKLCSVTLSNLNVYVCLICGKYYQGKSINTQAYIHSLE 68
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--------------------------- 191
HH+++NL+ K+YCLPD YE+ D SLEDI++
Sbjct: 69 QDHHLFMNLQNTKIYCLPDNYEVVDHSLEDIQYNLDPKFNNLKELDDNVEESRALDGTTF 128
Query: 192 ----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLT 241
VGLNN+ ++D+ NV +Q+L R+ PLRNF + + + P L RF +LT
Sbjct: 129 LPGFVGLNNLSKSDYFNVVMQALCRIKPLRNFMIFLQFQKSATEPFDYNCLLSQRFSELT 188
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RKIW+ RN+KG VSPHE LQAV S K+F+IG QS+P+ + W L+ L +L + K
Sbjct: 189 RKIWNPRNYKGHVSPHELLQAVTLKSNKQFKIGQQSDPMHLIIWFLDNLKKELLHINKIN 248
Query: 302 SIIYECFQGELEVVKEIP-KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+II +CFQGEL+ P KN I G I + S F L LDLP
Sbjct: 249 TIISDCFQGELQYEWYKPLKNAI-------------GYQPIPIIEQKS---FFYLSLDLP 292
Query: 361 PPPLFKDVMEKNIIPQL 377
PL KD +K +IP +
Sbjct: 293 STPLQKDGSQKALIPSI 309
>gi|328771476|gb|EGF81516.1| hypothetical protein BATDEDRAFT_10470 [Batrachochytrium
dendrobatidis JAM81]
Length = 506
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 206/333 (61%), Gaps = 52/333 (15%)
Query: 80 DEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 139
DE+ D+++N +G+ R L + YLDT+NR LDFDFEK CSVSLSNLNVYACLVC
Sbjct: 51 DEETDEVSNKHGKRIRQDLRGL-----YLDTINRARLDFDFEKLCSVSLSNLNVYACLVC 105
Query: 140 GKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------- 192
GKY+QG G S+AY HS+ HHV+IN+ T VY LP+ Y+++D SL DI++V
Sbjct: 106 GKYFQGIGVSSNAYYHSMGENHHVFINMDTLNVYVLPELYKVDDLSLNDIKYVIKPTFTE 165
Query: 193 --------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY 226
GLNNIKE D++NV +QS V LR++FL+ ++
Sbjct: 166 KDVEMLNKLSIHSYDLNNKMYIPGFVGLNNIKENDYINVIVQSFAHVELLRDYFLLDKS- 224
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
+S LV RFG L RK+W++R FKGQVSPHE +Q + S KRF++G Q++P +F+SWL
Sbjct: 225 -DSQSELVKRFGLLLRKMWNSRAFKGQVSPHELIQEISNVSDKRFKLGEQADPAQFLSWL 283
Query: 287 LNTLHSDLRNTKKN-TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT 345
+N LH L + K N +SI+ + FQGEL V+ P T DQ T G + +N+
Sbjct: 284 INKLHLGLCSKKSNKSSIMQQAFQGEL-YVESRPFIT----DQET-----GESNINNLGD 333
Query: 346 ET-SRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
T S +PF L LDLPPPPLF D EKNIIPQ+
Sbjct: 334 ATVSTLPFWFLTLDLPPPPLFSDEAEKNIIPQI 366
>gi|321253150|ref|XP_003192646.1| ubiquitin C-terminal hydrolase [Cryptococcus gattii WM276]
gi|317459115|gb|ADV20859.1| Ubiquitin C-terminal hydrolase, putative [Cryptococcus gattii
WM276]
Length = 573
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/324 (44%), Positives = 186/324 (57%), Gaps = 57/324 (17%)
Query: 101 VRRDCPYLDTVN---------RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
RRD YLDTV+ RQ LDFDFEK CS SLSN+NVYACLVCGKY+QGRG+ S
Sbjct: 79 TRRDM-YLDTVSPDRISFDISRQSLDFDFEKLCSKSLSNINVYACLVCGKYFQGRGKGSW 137
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------- 192
AY H++ H V++NL TEK Y LP+GY ++DPSL DI V
Sbjct: 138 AYRHAVGDNHRVWLNLDTEKFYVLPEGYPVSDPSLNDILRVLHPRYNASDIKALSTLPAP 197
Query: 193 --------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN--YRHCKSP--LV 234
G+NNIK+ D+ NV I L+ V PLRNF L P + + P LV
Sbjct: 198 SYTLSGQQYIPGFIGVNNIKKNDYCNVVIHLLLHVPPLRNFLLNPNTPELQEERRPTELV 257
Query: 235 HRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
RF L R++W++ FK Q+SPHEFLQ V K S +F+ Q +PVE + WL+NTLH DL
Sbjct: 258 RRFATLARRLWNSHLFKSQISPHEFLQEVSKRSNGKFKTTEQGDPVELLGWLVNTLHRDL 317
Query: 295 RNTKK-NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFL 353
+KK N+SIIY FQG++++ + + + + D G D +++ PFL
Sbjct: 318 GGSKKRNSSIIYSTFQGKVQIETQ----QVIVHKEYARPVFDIGRDIQTVSS-----PFL 368
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQL 377
L LDLP PLF D+ EK IIPQ+
Sbjct: 369 FLALDLPITPLFTDMNEKKIIPQV 392
>gi|443896604|dbj|GAC73948.1| spindle pole body protein - Sad1p [Pseudozyma antarctica T-34]
Length = 637
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 192/349 (55%), Gaps = 67/349 (19%)
Query: 96 SRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTH 155
+ L + + YLDT+NR VLDFDFEK CSVSLSN+NVYACLVCGKY+QGRG+ S+AY H
Sbjct: 129 TSLAKNSKSALYLDTINRAVLDFDFEKLCSVSLSNINVYACLVCGKYFQGRGRNSYAYLH 188
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEINDPS---LEDIRH--------------------- 191
S++ HHV++NL T + Y LPD Y + + S L+DI++
Sbjct: 189 SIDTSHHVFMNLATSQTYILPDNYAVPEESQAALQDIKYLLNPTFDTRTLATLDEKEAYD 248
Query: 192 ----------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLT 241
VGLNN+ + D+VNV +Q+L+ V PLR+FFL + S LV RFG L
Sbjct: 249 LNGTAYSPGFVGLNNVGKNDYVNVVVQALVHVRPLRDFFLRQHEAQAGTSELVARFGALV 308
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN----- 296
RKIW+ R FK QVSPHEFLQ V + S RF+I Q++PVEF+ WLLN LH+DL +
Sbjct: 309 RKIWNPRAFKPQVSPHEFLQQVAQVSHNRFKITEQADPVEFLGWLLNRLHADLASPGGKG 368
Query: 297 -TKKNTS-----IIYECFQGELEVVK------EIPKNTISGNDQNTEKGSDGGDDHDNI- 343
+K T+ II CFQG ++V E P++ + Q + G +
Sbjct: 369 AKRKRTAVGVETIISRCFQGVVQVESQPLEKVEKPEDDAAVAAQAERLANGAGPTGGQVD 428
Query: 344 -----------TTETSRMPFLMLGLDLP-PPPLF---KDVMEKNIIPQL 377
E PF +L +DLP PPP+ D +++PQ+
Sbjct: 429 GNGRACFDPAGKVERKDSPFFLLSMDLPTPPPVLGTDGDDESASLVPQV 477
>gi|71004356|ref|XP_756844.1| hypothetical protein UM00697.1 [Ustilago maydis 521]
gi|46095544|gb|EAK80777.1| hypothetical protein UM00697.1 [Ustilago maydis 521]
Length = 633
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 189/345 (54%), Gaps = 77/345 (22%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVSLSN+NVYACLVCG+Y+QGRG+ S+AY HS++ HHV++N
Sbjct: 141 YLDTINRAVLDFDFEKLCSVSLSNINVYACLVCGRYFQGRGRNSYAYLHSIDDSHHVFMN 200
Query: 167 LRTEKVYCLPDGYEI---NDPSLEDIRH-------------------------------V 192
L T + Y LPD Y + N +L DI++ V
Sbjct: 201 LATAQTYILPDNYAVPEENQAALHDIKYLLNPTFTPKTIHAIEARPAYDLNGDQYYPGFV 260
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLI---PENYRHCKSPLVHRFGDLTRKIWHARN 249
GLNN+ + D+VN IQ+L+ V +R++FL+ E KS LV RFG L RK+W+ R
Sbjct: 261 GLNNVGKNDYVNAVIQALVHVPMIRDYFLLGKEVEGEVGEKSELVKRFGSLVRKVWNPRA 320
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN--------- 300
FK QVSPHEFLQ V S RFRI QS+PVEF+ WLLN LH+DL KN
Sbjct: 321 FKAQVSPHEFLQQVAVVSGNRFRITHQSDPVEFLGWLLNCLHADLTRGGKNGGKRKRGVG 380
Query: 301 ---TSIIYECFQGELEVVKE------------------------IPKNTISGNDQNTEKG 333
S+I CFQG ++V + + + TISG +Q E G
Sbjct: 381 AGGESVISRCFQGVVQVESQPLSRSDETEAASSASTVAAEAEGMLKEATISG-EQVDESG 439
Query: 334 SDGGDDHDNITTETSRMPFLMLGLDLPPP-PLFKDVMEKNIIPQL 377
D ++ + PF +L +DLPPP P+ +N++PQ+
Sbjct: 440 RARFD--PSVPVDRRDSPFFLLAMDLPPPAPVISSEEGENLVPQI 482
>gi|403222446|dbj|BAM40578.1| ubiquitin carboxyl-terminal hydrolase [Theileria orientalis strain
Shintoku]
Length = 1027
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 179/313 (57%), Gaps = 57/313 (18%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE 158
V + R CPYL T+NR +LDFDFEK CS++L+N++VYACLVCGKY+QGRG+ +H YTH+LE
Sbjct: 100 VSLERKCPYLGTINRHLLDFDFEKVCSITLTNIHVYACLVCGKYFQGRGKNTHCYTHALE 159
Query: 159 AGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH--------------------------- 191
H++++NL KVYC+P+ Y + D SL+DI++
Sbjct: 160 ECHYLFMNLEDCKVYCIPENYLVEDASLDDIKYFLKPSYTRKDVELLKTQVTYGKALDGT 219
Query: 192 ------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSPLVHRFGDLTRKI 244
+GLNN+K+TD+ NV IQ + VTPLR+ FL+ + N ++ L RKI
Sbjct: 220 DFIPGCIGLNNLKKTDYFNVIIQMMCVVTPLRDLFLLFDVNKVQPPDAVITTMVQLIRKI 279
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
++ RNFKG VSPHEF+Q+V AS ++IGVQS+P SWLL +H L+N S++
Sbjct: 280 FNTRNFKGIVSPHEFVQSVGVASNGVYKIGVQSDPASLFSWLLARIHQKLQNRNTKESVV 339
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
F GEL V T+ G +E R PF ML L +P P+
Sbjct: 340 TRAFGGELLV------KTLRGTRWESE-----------------RKPFRMLTLVVPEAPI 376
Query: 365 FKDVMEKNIIPQL 377
FKD M+ N IPQ+
Sbjct: 377 FKDSMDTNAIPQV 389
>gi|19112097|ref|NP_595305.1| ubiquitin C-terminal hydrolase Ubp10 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74638873|sp|Q9USR2.1|UBP10_SCHPO RecName: Full=Probable mRNA-splicing protein ubp10; AltName:
Full=Probable inactive ubiquitin-specific-processing
protease 10
gi|5830507|emb|CAB54815.1| ubiquitin C-terminal hydrolase Ubp10 (predicted)
[Schizosaccharomyces pombe]
Length = 502
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/309 (43%), Positives = 181/309 (58%), Gaps = 47/309 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSVSL+NL+VYACLVCG+Y+QGRG SHAY H+L HHV++N
Sbjct: 60 YLDTINRKLLDFDFEKVCSVSLTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVN 119
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
T K Y LP+ Y++ +L+DI +V G
Sbjct: 120 CSTLKFYVLPESYQVESSALQDIAYVMRPTFTKLEVQRLDHTPQLSYDLMLKPYVPGFVG 179
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D+ NV I L V P RN+FL+ +N+ +C LV R L RK+W+ + FK
Sbjct: 180 MNNIKNNDYFNVVIHMLAHVKPFRNYFLL-KNFDNCPQ-LVQRLAILIRKLWNHKAFKSH 237
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----KNTSIIYECFQ 309
VSP E +Q V S K++ I Q +PVEF+SW LNTLH+ L K K TSI++ FQ
Sbjct: 238 VSPQELIQEVTVLSHKKYSINEQKDPVEFLSWFLNTLHNCLGGKKSTIAKPTSIVHYSFQ 297
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G + + + + Q+ EKG D + +T+ +PFL L LDLPP P+F+D
Sbjct: 298 GFVRIESQKIR-------QHAEKGEQVVFTGDRV-IQTNVVPFLYLTLDLPPKPIFQDEF 349
Query: 370 EKNIIPQLQ 378
E NIIPQ++
Sbjct: 350 EGNIIPQVE 358
>gi|84994334|ref|XP_951889.1| ubiquitin carboxyl-terminal hydrolase [Theileria annulata strain
Ankara]
gi|65302050|emb|CAI74157.1| ubiquitin carboxyl-terminal hydrolase, putative [Theileria
annulata]
Length = 578
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/309 (41%), Positives = 179/309 (57%), Gaps = 57/309 (18%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
+CPYL T+NR +LDFDFEK CS++LSN++VYACLVCGKY+QGRG+ ++ YTH+LE H++
Sbjct: 143 NCPYLGTINRHLLDFDFEKVCSITLSNVHVYACLVCGKYFQGRGKNTYCYTHALEECHYL 202
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIRH-------------------------------- 191
++NL +VYC+P+ Y ++D SL+DI+H
Sbjct: 203 FMNLEDCRVYCIPENYPVDDASLDDIKHFLKPVYTKKDVQTLSTQVIYGKALDGTDFIPG 262
Query: 192 -VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSPLVHRFGDLTRKIWHARN 249
+GLNN+K TD+ NV IQ + V PLRN FL+ + N P++ L RKI++ +N
Sbjct: 263 CIGLNNLKNTDYFNVIIQLICVVEPLRNLFLVFDVNRVQPPDPVIITLSQLIRKIFNVKN 322
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FKG VSPHEF+Q+V + ++IGVQS+PV +SWLL +H L N S++ + F
Sbjct: 323 FKGIVSPHEFVQSVGIVTNGLYKIGVQSDPVSLLSWLLARIHQKLHNRNTKESVVTKTFG 382
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
GEL ++K + K ET R PF ML L +P P+FKD M
Sbjct: 383 GEL-LIKTLKKT----------------------RWETERQPFRMLSLTVPEAPIFKDSM 419
Query: 370 EKNIIPQLQ 378
+ N IPQ Q
Sbjct: 420 DSNAIPQAQ 428
>gi|167516470|ref|XP_001742576.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779200|gb|EDQ92814.1| predicted protein [Monosiga brevicollis MX1]
Length = 620
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 202/337 (59%), Gaps = 60/337 (17%)
Query: 89 GYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQ 148
+ + +R +E R+CPYLDT++R LDFDFEK CSV+LSN NVYACLVCGKYYQGRG+
Sbjct: 152 AFRRYEREAQLERSRNCPYLDTISRARLDFDFEKLCSVNLSNQNVYACLVCGKYYQGRGK 211
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH----------------- 191
++AY HSLEA HHV++NL T + YCLPD YE+ D SL DI+
Sbjct: 212 GTNAYMHSLEASHHVFLNLHTLRFYCLPDNYEVIDNSLSDIQFVLKPTFSKAMMHALDHS 271
Query: 192 ----------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLV- 234
VGLNNIK D+VNV +Q+L RV LRNFFL PE R PL+
Sbjct: 272 SRYSRALDGTTYLPGIVGLNNIKANDYVNVVVQTLNRVPSLRNFFLDPEATRRMTDPLIV 331
Query: 235 -HRF------GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
RF L RKI + R FK VSPHEFLQAV SK++FR+ Q++PV+ +SWLL
Sbjct: 332 SSRFLLALALAKLIRKINNPRAFKSHVSPHEFLQAVNNGSKRQFRLTEQADPVDLLSWLL 391
Query: 288 NTLHSDLRNTKKNTSIIYECFQGELEVV-KEIPK----NTISG--NDQNTEKGSDGGDDH 340
NTL L +K+ ++I+ + FQG + V +++P +SG D N+E+ D
Sbjct: 392 NTLQRKL--SKRGSNIVADTFQGRMRVTSRKLPPPPDVQEVSGLRIDPNSEEYQD----- 444
Query: 341 DNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ S FL LGLDLPPPPL++D +NIIPQ+
Sbjct: 445 -----KVSEQKFLFLGLDLPPPPLYQDETRQNIIPQV 476
>gi|300176119|emb|CBK23430.2| unnamed protein product [Blastocystis hominis]
Length = 501
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/332 (38%), Positives = 182/332 (54%), Gaps = 57/332 (17%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDTV+R+VLDFD EK CSV+LS+ NVY CLVCG Y QGR + + Y HS++ HH
Sbjct: 14 RSCPYLDTVDRKVLDFDLEKECSVTLSHKNVYVCLVCGVYLQGRAENTPVYFHSMQEDHH 73
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIR-------------------------------- 190
V++N T+K YCLPD YEI D SLEDI+
Sbjct: 74 VFLNTETKKFYCLPDNYEIVDHSLEDIKMALDPEFTPESIKKLDSNTMHYRVPTGDEYLP 133
Query: 191 -HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
+G+N + D+VNV +Q+L VTP+R+FFLIP NY + +PLVH FG L RK+W
Sbjct: 134 GEMGMNVVDNADYVNVVVQALSHVTPIRDFFLIPANYSYTSNPLVHSFGVLIRKLWSHTR 193
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FK V+P+EFL V ++S ++F + + + EF+ WLLN+LH+ L++ + T++I CF+
Sbjct: 194 FKCNVTPYEFLNEVTRSSNEKFTVKERRDASEFLCWLLNSLHTALKDKEHKTTVIDRCFK 253
Query: 310 GELEVVKEIPKNT-ISGNDQNTEKGSDGGDDHDNITTETSRMP----------------- 351
G +EV + K ISG +++ TS P
Sbjct: 254 GRIEVTRRTYKLVGISGFQKSSRIPVSAWKWPPTTAACTSTFPRPRISQILAGNEAKVET 313
Query: 352 ------FLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ ML LDLPP PLF++ +++ +L
Sbjct: 314 AVKQQDYWMLSLDLPPIPLFRNSNNDSVVNKL 345
>gi|367037283|ref|XP_003649022.1| hypothetical protein THITE_2107139 [Thielavia terrestris NRRL 8126]
gi|346996283|gb|AEO62686.1| hypothetical protein THITE_2107139 [Thielavia terrestris NRRL 8126]
Length = 559
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/308 (47%), Positives = 193/308 (62%), Gaps = 48/308 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY H+L+ HHV+IN
Sbjct: 92 YLDTIDRNVLDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHALDEDHHVFIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ SL+DI++ VG
Sbjct: 152 MSTQKVYVLPEGYEVKSKSLDDIKYVSDPRYTRQEVAEFDRKPRTSWTLAGKEYTPGFVG 211
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIKE D++NV +Q+L V+PLRN+FL+ E++ LV R L RKIW+ R FK
Sbjct: 212 MNNIKENDYLNVVVQALSHVSPLRNYFLL-EDFSAAPE-LVKRTSILFRKIWNPRAFKAH 269
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--RNTKKNTSIIYECFQGE 311
VSPHE LQ + S KRF + QS+PV+F+SW LN LH L TK +S+I FQG+
Sbjct: 270 VSPHELLQEISLQSNKRFTLTTQSDPVDFLSWFLNHLHLGLGGSKTKPGSSVIQRIFQGK 329
Query: 312 LEV-VKEIPKNTISGNDQ-NTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
L+V + I T + D+ E+ +D + + +R FL+L LDLPP PLF+D
Sbjct: 330 LKVESQAITARTDTQQDRLRFEEAAD-------VKVDIAR--FLLLTLDLPPTPLFQDEQ 380
Query: 370 EKNIIPQL 377
E+NIIPQ+
Sbjct: 381 ERNIIPQV 388
>gi|213409724|ref|XP_002175632.1| U4/U6.U5 tri-snRNP-associated protein [Schizosaccharomyces
japonicus yFS275]
gi|212003679|gb|EEB09339.1| U4/U6.U5 tri-snRNP-associated protein [Schizosaccharomyces
japonicus yFS275]
Length = 506
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 176/317 (55%), Gaps = 63/317 (19%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDF+K CSVSLSNLNVYACLVCGKYYQGRG S+AY H+L HHV++N
Sbjct: 59 YLDTINRSMLDFDFDKLCSVSLSNLNVYACLVCGKYYQGRGPNSYAYVHALTENHHVFVN 118
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
T + Y LP+ Y++ +L+DI++V G
Sbjct: 119 CSTLRFYILPESYQVTSAALDDIKYVMQPTYTKEQVSQLDVKETTSYDLDKKPYFPGFIG 178
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKG 252
+NNIK+ D++NV +Q+L V P RN+FL+ + SP +V R L RKIW+ R FK
Sbjct: 179 MNNIKQNDYLNVIVQALAHVKPFRNYFLLTD---FSSSPSIVQRLATLIRKIWNPRAFKN 235
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN------TSIIYE 306
VSP E Q + S K++ + Q +P+EF++WLL+TLH L ++K TSII+
Sbjct: 236 HVSPQELTQEITVLSHKKYSVNEQQDPIEFLTWLLSTLHVALGGSRKKVFSLKPTSIIHY 295
Query: 307 CFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR------MPFLMLGLDLP 360
FQG I Q + G D+I E R +PFL L LD P
Sbjct: 296 IFQG-----------CIRMESQKIHAQTRAG---DHIVFEADRRIEVNLVPFLYLTLDPP 341
Query: 361 PPPLFKDVMEKNIIPQL 377
P PLF+D E NIIPQ+
Sbjct: 342 PKPLFQDEFEGNIIPQV 358
>gi|301117246|ref|XP_002906351.1| U4/U6.U5 tri-snRNP-associated protein, putative [Phytophthora
infestans T30-4]
gi|262107700|gb|EEY65752.1| U4/U6.U5 tri-snRNP-associated protein, putative [Phytophthora
infestans T30-4]
Length = 493
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 176/310 (56%), Gaps = 74/310 (23%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
RR CPYLDTVN Q+LDFDFEK CS+SLS+ NVYACLVCGKY+QGRG+ +HA+THS+++ H
Sbjct: 27 RRKCPYLDTVNHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSH 86
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------- 190
HV+INL+T+++YCLPD YE+ D +L+ ++
Sbjct: 87 HVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPRFEETQIAQLDQNRILAQDAFGVSYL 146
Query: 191 --HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHAR 248
+GLNN+K TD++NV +Q+L V PLR+FFL KS LV RFG+L RK+W
Sbjct: 147 PGFIGLNNLKHTDYINVVVQALAHVPPLRDFFL-ANKMGKVKSKLVLRFGELLRKMWSPH 205
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYEC 307
NFK +SPHE +Q + S L T K +SII++C
Sbjct: 206 NFKNTISPHELVQEI----------------------------SGLGGTHKPGSSIIHKC 237
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
FQG +EV + +D+ SD + ++T S PFLM+ LDLP PLFKD
Sbjct: 238 FQGFVEV---------TTDDETKVASSDPAERESAVSTTVS--PFLMMALDLPSTPLFKD 286
Query: 368 VMEKNIIPQL 377
NIIPQ+
Sbjct: 287 SQGGNIIPQI 296
>gi|156085110|ref|XP_001610038.1| u4/u6.u5 tri-snRNP-associated 65 kDa protein [Babesia bovis T2Bo]
gi|154797290|gb|EDO06470.1| u4/u6.u5 tri-snRNP-associated 65 kDa protein, putative [Babesia
bovis]
Length = 470
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 184/319 (57%), Gaps = 65/319 (20%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL T+NR +LDFDFEK CS++LSN +VYACLVCG+Y++GRG+ ++AYTH+LE H+V+
Sbjct: 40 CPYLGTINRHLLDFDFEKVCSITLSNKHVYACLVCGRYFEGRGKNTYAYTHALEERHYVF 99
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRH--------------------------------- 191
INL KVY LPD Y + D SL DI
Sbjct: 100 INLHDCKVYSLPDNYHVEDASLNDIALFLKPKYTKEYVENIDTKIVYGKGLDGTDFIPGC 159
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP--LVHRFGDLTRKIWHARN 249
+GLNN+K+TD+ NV IQ L V +RN+ L+ + R + P ++ +L RKI++ +N
Sbjct: 160 IGLNNLKQTDYFNVIIQVLCTVATVRNYLLLLDIDR-IQPPDNVISTLVELIRKIYNTKN 218
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FKG VSPHEFLQAV ASK ++IGV ++PV ++WLLN L + LRN K SI+ + F
Sbjct: 219 FKGIVSPHEFLQAVGVASKGLYKIGVHNDPVALLTWLLNRLDTKLRNKKTKESIVAKAFG 278
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G+L V + D DN T + + PF M+ LD+P P+FKD
Sbjct: 279 GQLNVYTQ---------------------DGDNWTQKIT--PFKMITLDVPNAPIFKDDK 315
Query: 370 EKNIIPQ------LQRLSG 382
EKNIIPQ LQ+ G
Sbjct: 316 EKNIIPQVSIFQLLQKFQG 334
>gi|348688293|gb|EGZ28107.1| hypothetical protein PHYSODRAFT_309027 [Phytophthora sojae]
Length = 489
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 172/307 (56%), Gaps = 72/307 (23%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT+N Q+LDFDFEK CS+SLS+ NVYACLVCGKY++GRG+ +HA+THS+++ HHV+
Sbjct: 24 CPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFKGRGRNTHAFTHSVQSSHHVF 83
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIR---------------------------------H 191
INL+T+++YCLPD YE+ D +L+ ++
Sbjct: 84 INLQTDRIYCLPDNYEVVDNTLKPVQDALRPAFEPEQIARLDQNRILAQDAFGVSYLPGF 143
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-PENYRHCKSPLVHRFGDLTRKIWHARNF 250
+GLNN+K TD++NV +Q+L V PLR+FFL + KS LV RFG+L RK+W NF
Sbjct: 144 IGLNNLKHTDYINVVVQALAHVPPLRDFFLANAATTKKIKSKLVLRFGELLRKMWSPHNF 203
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG 310
K +SPHE +Q + K +SII++CFQG
Sbjct: 204 KNTISPHELVQEISGLGGSH---------------------------KPGSSIIHKCFQG 236
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME 370
+EV + +D+ +D + ++T S PFLM+ LDLP PLFKD
Sbjct: 237 FVEV---------TTDDETKAASADPAERESAVSTTVS--PFLMMALDLPSTPLFKDSQG 285
Query: 371 KNIIPQL 377
NIIPQ+
Sbjct: 286 GNIIPQI 292
>gi|388855294|emb|CCF51188.1| related to SAD1-protein required for assembly of U4 snRNA into the
U4/U6 particle [Ustilago hordei]
Length = 643
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 192/347 (55%), Gaps = 76/347 (21%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CSVSLSN+NVYACLVCG+Y+QGRG+ S+AY HS++ HHV++N
Sbjct: 136 YLDTINRAVLDFDFEKLCSVSLSNINVYACLVCGRYFQGRGRNSYAYLHSIDDSHHVFMN 195
Query: 167 LRTEKVYCLPDGYEI---NDPSLEDIRH-------------------------------- 191
L + + Y LPD Y + N +L+DI++
Sbjct: 196 LASAQTYILPDNYAVLEENQAALQDIKYLLNPTFTPQLIREVDEKQAYYELKGEKYWPGF 255
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK---SPLVHRFGDLTRKIWHAR 248
+GLNN+ + D+VN +Q+L+ V +R++FL + + K S LV RFG L RK+W+ R
Sbjct: 256 IGLNNVGKNDYVNAVVQALVHVPVVRDYFLEEKERKDGKGERSELVKRFGALVRKMWNPR 315
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK--------- 299
FK QVSPHEFLQ V + S RF+I QS+PVEF+ WLLN LH+DL +
Sbjct: 316 AFKPQVSPHEFLQQVAQVSGNRFKITHQSDPVEFLGWLLNRLHADLTSAPAVAAGKPAKR 375
Query: 300 ------NTSIIYECFQGELEVVKE---------IPKNTISGNDQNTEK---GSDGGDDHD 341
SII CFQG ++V + P +T + ++ ++ SDG D +
Sbjct: 376 KRVGPGGESIISRCFQGTVQVESQPLTRPAEDAYPTSTSAQAERILDQPLTTSDGQIDSE 435
Query: 342 -------NITTETSRMPFLMLGLDLPPPP--LFKDVME--KNIIPQL 377
++T PF +L +DLP PP L +D E ++PQ+
Sbjct: 436 GRAQFDPSLTLNKRDTPFFLLAMDLPTPPPVLAQDDSETGSRLVPQV 482
>gi|388582119|gb|EIM22425.1| putative U4/U6.U5 tri-snRNP-associated protein [Wallemia sebi CBS
633.66]
Length = 449
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 180/304 (59%), Gaps = 45/304 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTVNR +LDFDFEK CSV+LSN ++Y CL+CGKYYQGR + S AY HS++ HHVY+
Sbjct: 11 YLDTVNRHLLDFDFEKVCSVTLSNKSIYCCLICGKYYQGRSKTSAAYNHSIDEEHHVYLG 70
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR--------------------------------HVGL 194
L +++ Y LP+ Y+++D SL DI ++GL
Sbjct: 71 LDSKQFYILPENYKVDDNSLADILKVLEPSYESGDLDKLDSDLVGQDLNKNDYLVGYIGL 130
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
NN+ D+ NV + L + PLRN FL+ + CK+ L+ R+ +++W+ + FK QV
Sbjct: 131 NNMSNNDYANVILNMLTHIRPLRNHFLLLND---CKTELLRRYSLFNKRVWNDKLFKSQV 187
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELE 313
SPHE LQ + K S +F I S+PVEF+++LLN LH DL KK N+SIIY+ FQG+L
Sbjct: 188 SPHEVLQLITKLSANKFNIQNSSDPVEFLTFLLNQLHKDLGGNKKPNSSIIYQLFQGQLR 247
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNI 373
+ + I D+N E + D +TT + PFL+L DLPP P+F D +NI
Sbjct: 248 MTSQ----KIIQLDEN-EDINKKFIKEDKVTTINT--PFLILSCDLPPKPVFND--NENI 298
Query: 374 IPQL 377
IPQ+
Sbjct: 299 IPQV 302
>gi|399216416|emb|CCF73104.1| unnamed protein product [Babesia microti strain RI]
Length = 461
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 186/346 (53%), Gaps = 67/346 (19%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVR------RDCPYLDTVNRQVLDFDFEKF 123
+ G DD D+ Y + +R+ LV R RDCPYL T+NR VLDFDFEK
Sbjct: 3 KRGSDDAHTSITVSDE----YRKTKRADLVTKRYESTKRRDCPYLGTINRHVLDFDFEKI 58
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND 183
CSVSLS N+YACLVCGKYYQGRG ++ H+LE GH++YINL+ +VYCLP+ Y + D
Sbjct: 59 CSVSLSTNNIYACLVCGKYYQGRGPNTYCNIHALEEGHYLYINLKDSQVYCLPENYLVQD 118
Query: 184 PSLEDIRH---------------------------------VGLNNIKETDFVNVTIQSL 210
SL DI++ +GLNN+ +TD NV IQ L
Sbjct: 119 NSLNDIKYFLNPTYTNEDVEEKSTKAIYGKALDGTDFIPGVIGLNNLNKTDCFNVIIQIL 178
Query: 211 MRVTPLRNFFLIPENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
V PLR+ L + + K +V +L RKI++ NFKG VSPHEFLQ++ ASK
Sbjct: 179 CCVKPLRDKMLTFDTGKLSKPDRVVETLSELIRKIYNPNNFKGIVSPHEFLQSIGLASKG 238
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
++RIG QS+P F+ WL +HS L+ N+SI+ +CFQGEL + + +
Sbjct: 239 KYRIGNQSDPAVFLQWLFVWIHSKLKRKGTNSSIVTDCFQGELFITEHV----------- 287
Query: 330 TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIP 375
GD+ E + PF +L L++P +F D + IP
Sbjct: 288 -------GDE-----MEQKKTPFKLLTLEIPQMSVFNDANAISQIP 321
>gi|328869581|gb|EGG17958.1| SAP DNA-binding domain-containing protein [Dictyostelium
fasciculatum]
Length = 524
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 181/316 (57%), Gaps = 45/316 (14%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
RRDCPYLDTVNR VLDFDF+K CS+S+ NVYACLVCGK +QGRG+ SHA+ H L++
Sbjct: 88 ARRDCPYLDTVNRGVLDFDFDKVCSISMVKHNVYACLVCGKNFQGRGEGSHAHYHCLQSN 147
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
HHV+ NL T+K YCLP+ YEI DPSL+DIR++ +N + ++ ++ + L
Sbjct: 148 HHVFANLHTQKFYCLPEDYEIIDPSLDDIRYL-INPTFTKEQISKMDSNIKQSRSLDGGL 206
Query: 221 LIPENYRHC-------------------KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
P+ + S LV F +L R++W+ RNFK QVSPHE +Q
Sbjct: 207 YYPDPLQQIENRNNQNNNQNNVHISFSKSSALVSTFSELLRRMWNPRNFKSQVSPHELIQ 266
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT-------------------- 301
AV+KASKKRF IGV+S+P++ + WLLN+L++D+ K T
Sbjct: 267 AVIKASKKRFSIGVESDPLDLLQWLLNSLNNDIIEQKNITGNSSSSSSSSSSSSSSSSSS 326
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+II FQG +EV K+ + Q E+ D ++ T +PF L LDLP
Sbjct: 327 TIITNTFQGMVEVTT---KSLLKAPTQQEEQ--DNITNNQEFKTTKQIIPFFTLALDLPS 381
Query: 362 PPLFKDVMEKNIIPQL 377
+FK+ +K+ IPQ+
Sbjct: 382 RSIFKEDRDKSFIPQI 397
>gi|145351909|ref|XP_001420302.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580536|gb|ABO98595.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 423
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/315 (42%), Positives = 173/315 (54%), Gaps = 72/315 (22%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDTVN LDFDFEK C+VSLS ++VYACLVCGKY+ GRG+K+HAY H+LE GHHV+
Sbjct: 1 CPYLDTVNLANLDFDFEKRCAVSLSPVHVYACLVCGKYFAGRGKKTHAYAHALECGHHVF 60
Query: 165 INLRTEKVYCLPDGYEIND--PSLEDIRHV------------------------------ 192
+ L +CLPDGYE+ D +L IR V
Sbjct: 61 MRLADGAAWCLPDGYEVVDEGTTLSRIRDVLAPTYAKKYVEEEIEGARPMWRRALDGTEF 120
Query: 193 -----GLNNI--KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIW 245
GLN I K D V+ +QSL RV PLR L+ + + + D+T+KIW
Sbjct: 121 LVGVVGLNAIWSKRDDGVSAVLQSLNRVAPLRRALLLDDARE--REDVYRALADITKKIW 178
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQS---NPVEFMSWLLNTLHSDLRNTKKNTS 302
+ARNFKG SPHEF+QAV SK F G ++ + +F+ WLLN L D + + S
Sbjct: 179 NARNFKGHSSPHEFMQAVRNRSKDAF--GAETGNHDAAQFLRWLLNELIRDEKKRGEKRS 236
Query: 303 IIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+I CFQGE+E++ +D + + S PFLML +DLP
Sbjct: 237 VIQSCFQGEVEII----------DDSSASRAS----------------PFLMLSMDLPNA 270
Query: 363 PLFKDVMEKNIIPQL 377
PLF+DVMEKNIIPQ+
Sbjct: 271 PLFQDVMEKNIIPQV 285
>gi|320588581|gb|EFX01049.1| snRNP assembly protein [Grosmannia clavigera kw1407]
Length = 566
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 156/276 (56%), Gaps = 65/276 (23%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R VLDFDFEK CSVSLSN+NVYACLVCG+YYQGRG +SHAY H+L+ HHV+IN
Sbjct: 45 YLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYYQGRGPRSHAYFHALDEDHHVFIN 104
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR------------------------------------ 190
++T++VY LP+GYE++ SL+DI+
Sbjct: 105 MQTQRVYVLPEGYEVHSRSLDDIKFVADPRYTRADVAGLDGGRRQTQTQTQTQQHHVTLA 164
Query: 191 -------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--------------- 228
+VG+NNIKE D++NV +Q+L V PLRNFFL+ E
Sbjct: 165 GRPYAPGYVGMNNIKENDYLNVVVQALAHVPPLRNFFLLDEVAAQEARRRSSNTATTGEK 224
Query: 229 -----CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
LV RFG L RKIW+ R FK VSPHE LQ V S KRF + QS+P +F+
Sbjct: 225 RPEAAANRELVRRFGLLVRKIWNPRAFKAHVSPHELLQEVALRSSKRFTLTAQSDPADFL 284
Query: 284 SWLLNTLHSDL--RNTKKNTSIIYECFQGELEVVKE 317
+W LN LH L ++ +SI+ FQG + V E
Sbjct: 285 AWFLNHLHLGLGGSRSRPASSIVQRVFQGRVRVRSE 320
>gi|240281183|gb|EER44686.1| U4/U6.U5 tri-snRNP-associated protein [Ajellomyces capsulatus H143]
Length = 587
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/226 (50%), Positives = 143/226 (63%), Gaps = 33/226 (14%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+ R VLDFDFEK CS+SLSN+NVYACLVCGKYYQGRG KSHAY H+L+ GHHV++N
Sbjct: 110 YLDTIQRSVLDFDFEKQCSISLSNINVYACLVCGKYYQGRGPKSHAYFHALDVGHHVFVN 169
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
+ T+KVY LP+GYE+ SL+DI++ VG
Sbjct: 170 METKKVYVLPEGYEVKSRSLDDIKYVVDPQYKKEEVAKLDKAVTDAWDLAGKRYRPGFVG 229
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV +Q L V P+RNFFL+ + L RFG L RK+W+ R FK
Sbjct: 230 MNNIKSNDYLNVIVQVLSHVRPIRNFFLLHQFPMPGTPQLPLRFGILVRKLWNPRAFKSH 289
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
VSPHE LQ V S KRF + QS+PV+F+SW LN LH L +KK
Sbjct: 290 VSPHELLQEVALRSSKRFTLTQQSDPVDFLSWFLNNLHLSLGGSKK 335
>gi|363746060|ref|XP_003643514.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Gallus gallus]
Length = 228
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 143/225 (63%), Gaps = 40/225 (17%)
Query: 115 VLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC 174
VLDFDFEK CS+SLS++NVYACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YC
Sbjct: 1 VLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYC 60
Query: 175 LPDGYEINDPSLEDIRH---------------------------------VGLNNIKETD 201
LPD YEI D SLEDI + VGLNNIK D
Sbjct: 61 LPDNYEIIDSSLEDITYVLKPTFTAQQIGNLDKQAKLSRAYDGTTYLPGIVGLNNIKAND 120
Query: 202 FVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFKGQV 254
+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+W+ RNFK V
Sbjct: 121 YANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHV 180
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
SPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L TKK
Sbjct: 181 SPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSALGGTKK 225
>gi|443920630|gb|ELU40516.1| spindle pole body protein [Rhizoctonia solani AG-1 IA]
Length = 532
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 198/355 (55%), Gaps = 67/355 (18%)
Query: 80 DEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVC 139
D D++D GY + Q + R YLDTVNR LDFDFEK CSVS+SN N+Y CLVC
Sbjct: 43 DLDDEDPYAGYDEKQEN----TRAADLYLDTVNRAALDFDFEKVCSVSMSNQNIYGCLVC 98
Query: 140 GKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIR--------- 190
GKY+QGRG+ SHAY HS+ HHV+I+L T +VY LPDGY+++DPSL+DI+
Sbjct: 99 GKYFQGRGKSSHAYAHSIHEDHHVFIHLETTEVYVLPDGYQVSDPSLDDIKYVLSPRFSP 158
Query: 191 -------------------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL---- 221
+VGL NIK D+++V +Q+L+ V P+R+F L
Sbjct: 159 AQIAKLRTDNIQTSYDLMSRPYIPGYVGLQNIKRNDYLSVIVQALLHVPPVRDFLLAMDG 218
Query: 222 --IP--------ENYRHCKSP--LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKK 269
+P + K P LV RF L +K+W+ R FK QVSPHEFLQ V + S
Sbjct: 219 STVPTPKTKPSAAPIKPVKQPSELVRRFAGLAKKVWNPRLFKSQVSPHEFLQEVARVSVG 278
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECF-QGELEVVKEIPKNTISGNDQ 328
+F+I Q +PVEF+ WLLN +H+DL TKK S Y LE + I K
Sbjct: 279 KFKITEQGDPVEFLGWLLNRIHADLGGTKKRGSSEYFLVGTFGLETQQVIVK-------- 330
Query: 329 NTEKGSDGGDDHDNITTETSRMP--FLMLGLDLPPPPLFKDVMEKNIIPQLQRLS 381
+ G H +I E + FL+L LDLPPPPLF+D +EKNIIPQ+ S
Sbjct: 331 --ADAASGVKPHFDIDREIKQTTTPFLLLALDLPPPPLFQDAVEKNIIPQVSLAS 383
>gi|342321041|gb|EGU12979.1| Spindle pole body protein [Rhodotorula glutinis ATCC 204091]
Length = 674
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 182/311 (58%), Gaps = 50/311 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR LDFDFE+ CSV+LS+ ++YACLVCGKY+QGRG+ + AY H+L HHVYIN
Sbjct: 180 YLDTINRAALDFDFERLCSVTLSHNHIYACLVCGKYFQGRGKSTPAYAHALNEDHHVYIN 239
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
L T KVY LPDGYE++D SL DI++ VG
Sbjct: 240 LDTRKVYVLPDGYEVDDASLADIKYLLYPTFTPQMLEKIDHQTQPELDLARKEYYPGFVG 299
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLI----PENYRHCKSPLVHRFGDLTRKIWHARN 249
LNN+K ++N +Q L+ V PLR++ ++ S L R G L RK+W+
Sbjct: 300 LNNMKHNSYMNAVLQLLLHVPPLRDYLILQLDPSSTSSRPTSELTTRLGLLARKLWNPHA 359
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECF 308
FK QVSPHEFLQ V AS +F+I Q +P+EF+ WLLN +H DL +K +SI+Y F
Sbjct: 360 FKSQVSPHEFLQEVANASGGKFKITEQGDPLEFLKWLLNQVHRDLGGGRKPRSSIVYSAF 419
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE--TSRMPFLMLGLDLPPPPLFK 366
QGE+ V + Q + G G +I E +++ PFL L LDLPPPPLF+
Sbjct: 420 QGEVRV----------DDQQIIKTGEFGTKPKFDIDREIKSTKTPFLFLALDLPPPPLFQ 469
Query: 367 DVMEKNIIPQL 377
D +E NIIPQ+
Sbjct: 470 DAVETNIIPQV 480
>gi|350582186|ref|XP_003125016.3| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Sus scrofa]
Length = 316
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 156/270 (57%), Gaps = 51/270 (18%)
Query: 52 EEEYGGRGDSGAKVGQNGRTGEDDDEDKD---EDEDDLANGY--GQGQRSRLVEVRRDCP 106
E E ++ A V R + D D+D E E NG + QRSR CP
Sbjct: 53 EVEPASAREAPAPVIPAVRVKRERDVDEDSEPEREVRAKNGRLDSEDQRSR------HCP 106
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HHV++N
Sbjct: 107 YLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLN 166
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
L T K YCLPD YEI D SLEDI + VG
Sbjct: 167 LHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLEKQVKFSRAYDGTTYLPGIVG 226
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKIWH 246
LNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+W+
Sbjct: 227 LNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWN 286
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
RNFK VSPHE LQAV+ SKK F+I Q
Sbjct: 287 PRNFKAHVSPHEMLQAVVLCSKKTFQITKQ 316
>gi|313228455|emb|CBY23606.1| unnamed protein product [Oikopleura dioica]
Length = 582
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 176/318 (55%), Gaps = 49/318 (15%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT++R +LDFDFEK CSVSLS+ NVY CL+C KY+QGRG+ +HAY H+L+ H+VY
Sbjct: 87 CPYLDTIHRAILDFDFEKLCSVSLSHNNVYCCLICSKYFQGRGKGTHAYLHALDCKHYVY 146
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRH--------------------------------- 191
+NL K YCLPD YEI DPSL+DI +
Sbjct: 147 LNLHNAKFYCLPDNYEIVDPSLDDILYQLNPMFTQEDLKELHYYEEVMTKKLVAFRRNGS 206
Query: 192 ------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI---PENYRHCKSPLVHRFGDLTR 242
+G+NNIK D++NV IQ L +V R+ FL+ N + ++ R G+L R
Sbjct: 207 KYWTGLIGMNNIKHNDYINVVIQGLAQVPKFRDHFLVRTFAGNKQTSDRIMLRRLGELLR 266
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-- 300
K+W +++ VSPHEFLQ+V+ SK RF+ + N EF++W LN+L +R +KN
Sbjct: 267 KLWKNHHYRPHVSPHEFLQSVVIESKGRFQFTERGNAGEFLTWFLNSLDKVMRKYEKNKE 326
Query: 301 TSIIYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+S I F+GE+EV + IP +S EK + R F+ L LDL
Sbjct: 327 SSFIRNIFEGEIEVTSRRIPNPELS----EEEKRKLLQLPKYKFEGVSERQKFMFLLLDL 382
Query: 360 PPPPLFKDVMEKNIIPQL 377
P PLF D ++ IPQ+
Sbjct: 383 PAKPLFVDPHKQIPIPQV 400
>gi|194706300|gb|ACF87234.1| unknown [Zea mays]
Length = 316
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 129/173 (74%), Positives = 147/173 (84%), Gaps = 7/173 (4%)
Query: 211 MRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
MRVTPLRNFFLIPENY+H KSPLVHRFG+LTRKIWHARNFKGQVSPHEFLQAVMKAS K+
Sbjct: 1 MRVTPLRNFFLIPENYQHSKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASDKK 60
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYECFQGELEVVKEIPKNTI-----S 324
F+IGVQS+PVEFM+WLLNTLH+ L+++ KKN SII++CFQGELEVVKE+ + I
Sbjct: 61 FQIGVQSDPVEFMTWLLNTLHAKLKSSKKKNRSIIHDCFQGELEVVKEVHRKHIMEKRED 120
Query: 325 GNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
G + N E GS G D I TETS++PFLMLGLDLPPPPLFKD MEKNIIPQ+
Sbjct: 121 GGELNGEAGSVVGTA-DGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIPQV 172
>gi|323508249|emb|CBQ68120.1| related to SAD1-protein required for assembly of U4 snRNA into the
U4/U6 particle [Sporisorium reilianum SRZ2]
Length = 626
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 175/325 (53%), Gaps = 71/325 (21%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
+ YLDT+NR VLDFDFEK CS+SLSN+NVYACLVCG+Y QGRG+ S+AY HS++ HH
Sbjct: 131 KSALYLDTINRAVLDFDFEKLCSISLSNINVYACLVCGRYLQGRGRNSYAYLHSIDDSHH 190
Query: 163 VYINLRTEKVYCLPDGYEI---NDPSLEDIRH---------------------------- 191
V++NL T + Y LPD Y + N +L+DI++
Sbjct: 191 VFMNLSTAQTYILPDNYAVPEENQAALQDIKYLLNPTFSRKTIDAIDAGPAYDLNGEQYY 250
Query: 192 ---VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC---KSPLVHRFGDLTRKIW 245
VGLNN+ + D+VN +Q+L+ V +R++FL+ E+ R KS LV RFG L RK+W
Sbjct: 251 PGFVGLNNVGKNDYVNAVVQALVHVPAIRDYFLL-EHEREGDVEKSELVKRFGALVRKMW 309
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----------R 295
+ + FK QVSPHEFLQ V S RF+I QS+PVEF+ WLLN LH+DL
Sbjct: 310 NPKAFKAQVSPHEFLQQVAAVSGNRFKITHQSDPVEFLGWLLNRLHADLAGGKGGKRKRG 369
Query: 296 NTKKNTSIIYECFQGELEV---------------------VKEIPKNTISGNDQNTEKGS 334
S+I + FQG ++V E T N Q E+G
Sbjct: 370 PGAAGESVISKSFQGVVQVESQPLAARSEEAEPSASAVAAQAEPLLKTQQSNGQTDEQGR 429
Query: 335 DGGDDHDNITTETSRMPFLMLGLDL 359
D ++ S PFL+L +DL
Sbjct: 430 VRFDPALSVDKRDS--PFLLLAMDL 452
>gi|294940392|ref|XP_002782775.1| pre-mRNA-splicing factor SAD1, putative [Perkinsus marinus ATCC
50983]
gi|239894725|gb|EER14570.1| pre-mRNA-splicing factor SAD1, putative [Perkinsus marinus ATCC
50983]
Length = 505
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/317 (43%), Positives = 176/317 (55%), Gaps = 63/317 (19%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
+ + CPYL TVNR +LDFDFEK CSV+LSN NVYACLVCGKYY GRGQ + AYTH+LE
Sbjct: 33 MEKKCPYLGTVNRNMLDFDFEKVCSVTLSNENVYACLVCGKYYTGRGQGTCAYTHALEKD 92
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIRH----------------------------- 191
H+V+INL+ +VYC+PDGYE+ D SL+DIR+
Sbjct: 93 HYVFINLKNTRVYCIPDGYEVIDASLDDIRYNLNPTFTRDMLNSTIDKSTAIGFTLDGRP 152
Query: 192 -----VGLNNIK-ETDFVNVTIQSLMRVTPLRNFFLI-PENYRHCKSPLVHRFGDLTRKI 244
VGLN I TD++NV +Q L +V PLRN L ++ ++ + +L RK
Sbjct: 153 FLPGCVGLNTISGGTDYLNVIVQILQQVVPLRNSLLTKKQDLDASRTDITEALAELFRKT 212
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
++A+NFKG VSPHEFLQ V SKK F Q +P EF++WLLN L + I
Sbjct: 213 YNAKNFKGVVSPHEFLQVVSIKSKKHF-FTSQRDPAEFLTWLLNHL--------RPHKTI 263
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F+GE+ V T D T GD + T+E FL L LDLP PL
Sbjct: 264 NKIFKGEILV------KTCRNLDSQT-----AGDVWEETTSE-----FLTLTLDLPDAPL 307
Query: 365 FKDVMEKNIIPQLQRLS 381
FKD E IPQ+ +S
Sbjct: 308 FKDTQE--FIPQVPMIS 322
>gi|71031494|ref|XP_765389.1| ubiquitin carboxyl-terminal hydrolase [Theileria parva strain
Muguga]
gi|68352345|gb|EAN33106.1| ubiquitin carboxyl-terminal hydrolase, putative [Theileria parva]
Length = 537
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 169/288 (58%), Gaps = 56/288 (19%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
+CPYL T+NR +LDFDFEK CS++LSN++VYACLVCGKY+QGRG+ ++ YTH+LE H++
Sbjct: 143 NCPYLGTINRHLLDFDFEKVCSITLSNIHVYACLVCGKYFQGRGKNTYCYTHALEECHYL 202
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
++NL +VYC+P+ Y ++D SL+DI+ + + V PLRN FL+
Sbjct: 203 FMNLEDCRVYCIPENYPVDDASLDDIKLICV------------------VVPLRNLFLVF 244
Query: 224 E-NYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
+ N P++ L RKI++ +NFKG VSPHEF+Q+V + ++IGVQS+PV
Sbjct: 245 DVNKVQPPDPVITTLSQLIRKIFNVKNFKGIVSPHEFVQSVGIVTNGLYKIGVQSDPVSL 304
Query: 283 MSWLLNTLHSDLRNTKKNT------------SIIYECFQGELEVVKEIPKNTISGNDQNT 330
+SWLL +H L N KNT SI+ + F GEL ++K + KN
Sbjct: 305 LSWLLARIHQKLHN--KNTKGSFKTSFHIVESIVTKTFGGEL-LIKTLKKN--------- 352
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQLQ 378
ET R PF ML L +P P+FKD M+ N IPQ Q
Sbjct: 353 -------------RWETERQPFRMLSLTVPEAPIFKDSMDTNAIPQAQ 387
>gi|221060993|ref|XP_002262066.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium knowlesi strain H]
gi|193811216|emb|CAQ41944.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein,
putative [Plasmodium knowlesi strain H]
Length = 682
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 142/220 (64%), Gaps = 33/220 (15%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL T+NR +LDFDFEK CS+S+SNL+VYACLVCG Y+QG G+ +HAYTH+LE H+V+
Sbjct: 83 CPYLRTINRNLLDFDFEKLCSISMSNLHVYACLVCGVYFQGIGKGTHAYTHALEKNHYVF 142
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRH--------------------------------- 191
INL T K CLP+ YEI D SL DI++
Sbjct: 143 INLETCKTCCLPENYEIEDASLNDIKYFLKPTYSRDQVEYICRNSILGKSLDGADFFPGF 202
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VGLNN+K TD+ NV IQ + + PLRNFFL+ EN ++ +V +L +KI++ RNFK
Sbjct: 203 VGLNNLKHTDYCNVIIQLVCSIIPLRNFFLVFENKKYVSKNIVSSLSELIKKIFNPRNFK 262
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
G VSPHEFLQ V SKK F+IG +++P++F WL++ +H
Sbjct: 263 GVVSPHEFLQTVGIESKKTFKIGSKNDPLDFFLWLISKIH 302
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 320 KNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+N +S +D++ DG + ++ T ++PF L L LP PP+FK E NIIPQ+
Sbjct: 476 ENDMSNSDEDDTDLQDGEELNEEKNYVTEKIPFRTLSLKLPNPPIFKSTTESNIIPQV 533
>gi|90075992|dbj|BAE87676.1| unnamed protein product [Macaca fascicularis]
Length = 485
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 174/310 (56%), Gaps = 52/310 (16%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
R E D++ + E E NG + R R CPYLDT+NR VLDFDFEK CS+SLS
Sbjct: 74 REREVDEDSEPEREVRAKNGRVDSEDRR----SRHCPYLDTINRSVLDFDFEKLCSISLS 129
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDI 189
++N YACLVCGKY+QGRG KSHAY HS++ HHV++NL T K YCLPD Y+
Sbjct: 130 HINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYK--------- 180
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
NIK P FL LV RFG+L RK+W+ RN
Sbjct: 181 ------NIKR--------------PPGDIMFL-----------LVQRFGELMRKLWNPRN 209
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECF 308
FK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK +I+ + F
Sbjct: 210 FKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVF 269
Query: 309 QGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
QG + + K++P + ++ + D++ E++ F+ L LDLP PL+KD
Sbjct: 270 QGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKD 323
Query: 368 VMEKNIIPQL 377
E+ IIPQ+
Sbjct: 324 EKEQLIIPQV 333
>gi|320166703|gb|EFW43602.1| ubiquitin specific peptidase 39 [Capsaspora owczarzaki ATCC 30864]
Length = 492
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 157/281 (55%), Gaps = 32/281 (11%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDTV+R LDFDFEK CSVSLS+ N+YACL+CGKY+Q Q S+ +Y
Sbjct: 97 CPYLDTVDRSQLDFDFEKVCSVSLSDFNIYACLICGKYFQAIQQLDTVSRQSVGLDGVLY 156
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
+ P + VGLNNI D++NV IQ L R+ PLR+F L +
Sbjct: 157 L------------------PGV-----VGLNNIIHNDYMNVIIQMLNRIQPLRDFLLSSQ 193
Query: 225 NYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
CK+PL +L RKIW+ RNFKG VSPH LQ++ AS KRF + Q++P + +S
Sbjct: 194 ADEACKTPLTSAASELFRKIWNPRNFKGHVSPHVMLQSIASASSKRFTLAQQADPSDLLS 253
Query: 285 WLLNTLHSDLRNTKKN-TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGD----- 338
WLLNT H+DL T+++ +SII++ FQG ++++ + + + E
Sbjct: 254 WLLNTFHTDLGGTRRSGSSIIHKIFQGSMKMISRKMPAVVDEEEASEEPAVHAAKRARLE 313
Query: 339 ---DHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ 376
D + S PF+ L LDLPP PLFKD KN IPQ
Sbjct: 314 EDVAEDEYEDKVSESPFMFLSLDLPPAPLFKDETGKNFIPQ 354
>gi|67528520|ref|XP_662062.1| hypothetical protein AN4458.2 [Aspergillus nidulans FGSC A4]
gi|40741033|gb|EAA60223.1| hypothetical protein AN4458.2 [Aspergillus nidulans FGSC A4]
Length = 597
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 172/313 (54%), Gaps = 73/313 (23%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR +LDFDFEK CS GRG KS+AY H+LE HHV+IN
Sbjct: 111 YLDTINRHILDFDFEKLCS-------------------GRGPKSYAYFHALEVSHHVFIN 151
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV---------------------------------G 193
+ T+KVY LP+GYE+ + SL+DI++V G
Sbjct: 152 MGTKKVYVLPEGYEVKNKSLDDIKYVVDPYYTKDEVAKLDKVVTDAFDLSGRRYRPGFVG 211
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
+NNIK D++NV Q+L V P+RN+FL+ E + LV RFG L RK+W+ + F+
Sbjct: 212 MNNIKANDYLNVVAQALAHVLPIRNYFLLHEFPQPGTPQLVLRFGTLVRKLWNPKAFRSH 271
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----RNTKKNTSIIYECFQ 309
VSPHE LQ V S KRF + QS+PVEF+SW LN LH L + +K TS+++ FQ
Sbjct: 272 VSPHELLQEVALRSSKRFTLTQQSDPVEFLSWFLNNLHLALGGSRKPSKTPTSVVHAAFQ 331
Query: 310 GELEVVKEIPKNTISGNDQN-----TEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
G L + E T + QN TE G+ I ++T+ PFL+L LDLPP PL
Sbjct: 332 GHLRI--ESQAITAHSDTQNARLVFTESGT--------INSQTT--PFLILTLDLPPTPL 379
Query: 365 FKDVMEKNIIPQL 377
F+ ++IIPQ+
Sbjct: 380 FQSANRESIIPQV 392
>gi|156102809|ref|XP_001617097.1| ubiquitin carboxyl-terminal hydrolase [Plasmodium vivax Sal-1]
gi|148805971|gb|EDL47370.1| ubiquitin carboxyl-terminal hydrolase, putative [Plasmodium vivax]
Length = 685
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 141/220 (64%), Gaps = 33/220 (15%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL T+NR +LDFDFEK CS+S+SNL+VYACLVCG Y+QG G+ ++AYTH+LE H+V+
Sbjct: 91 CPYLRTINRNLLDFDFEKLCSISMSNLHVYACLVCGMYFQGIGKGTYAYTHALEKNHYVF 150
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRH--------------------------------- 191
INL + K CLP+ YEI D SL DI++
Sbjct: 151 INLESCKTCCLPENYEIEDASLNDIKYFLKPMYTVEQVEYICRNSILGKSLDGADFFPGF 210
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VGLNN+K TD+ NV IQ + + PLRNFFL+ E ++ ++ +L +KI++ RNFK
Sbjct: 211 VGLNNLKHTDYCNVIIQLVCSIIPLRNFFLVFETKKYMAKNIISSLSELIKKIYNPRNFK 270
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
G VSPHEFLQ V SKK F+IG Q++P++F WL++ +H
Sbjct: 271 GVVSPHEFLQTVGIESKKNFKIGSQNDPLDFFLWLISKIH 310
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 347 TSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
T ++PF L L LP PP+FK E NIIPQ+
Sbjct: 506 TEKIPFRTLSLKLPNPPIFKSTTESNIIPQV 536
>gi|124513102|ref|XP_001349907.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium falciparum 3D7]
gi|23615324|emb|CAD52315.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium falciparum 3D7]
Length = 640
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 145/233 (62%), Gaps = 35/233 (15%)
Query: 94 QRSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
Q++ L+ +R+ CPYL T+NR +LDFDFEK CS+SLSNL+VYACLVCG Y+QG G+ +H
Sbjct: 75 QKNNLLYKKRNRVCPYLRTINRNLLDFDFEKLCSISLSNLHVYACLVCGLYFQGIGKGTH 134
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------------------- 191
AYTHSLE H+V+INL T K C+P+GYEI D SL DI++
Sbjct: 135 AYTHSLEKNHYVFINLETCKTCCIPEGYEIVDASLNDIKYFLKPTYNKEQVEHLCYNSVL 194
Query: 192 -------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFG 238
VGLNN+K TD+ NV IQ + + PLRN L+ E + ++
Sbjct: 195 GKSLDGGDFLPGLVGLNNLKNTDYCNVIIQLICSIIPLRNTLLLYECKENIAKNIIVVLS 254
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
DL +KI++ RNFKG VSPHEFLQAV S K F+IG + P++F WLLN ++
Sbjct: 255 DLIKKIYNPRNFKGVVSPHEFLQAVGIESNKNFKIGTKKYPLDFFLWLLNKIY 307
>gi|83318021|ref|XP_731414.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491448|gb|EAA22979.1| Arabidopsis thaliana At4g22410/F7K2_7-related [Plasmodium yoelii
yoelii]
Length = 640
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/275 (43%), Positives = 163/275 (59%), Gaps = 36/275 (13%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYL T+NR +LDFDFEK CS+SLSNL+VYACLVCG Y+QG G+ ++AYTH+LE H+
Sbjct: 86 RVCPYLRTINRNLLDFDFEKLCSISLSNLHVYACLVCGIYFQGIGRGTYAYTHALEKNHY 145
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
V+INL T K C+P+ YEI+D SL DI++
Sbjct: 146 VFINLETCKTCCIPENYEIHDASLNDIKYFLKPVYNKEQVEHLCNNLILGKSLDGADFFP 205
Query: 192 --VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
VGLNN+K TD+ NV IQ L + PLRN L+ E+ ++ L+ +L +KI++ +N
Sbjct: 206 GCVGLNNLKHTDYCNVIIQLLCCIVPLRNMLLLYESKQNIAKNLIVVLAELLKKIYNPKN 265
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL--HSDLRNTKKNTSIIYEC 307
FKG VSPHEFLQAV SKK F+IG +++P+ F W++N + HS+ + KK +I +
Sbjct: 266 FKGVVSPHEFLQAVGIESKKNFKIGTKNDPLNFFLWIINKIHRHSEKKLQKKKKNIPNQA 325
Query: 308 F-QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHD 341
Q L I KN ND+ + + DHD
Sbjct: 326 NKQNNLIANNNISKNAHPKNDEGEKNYTSTKKDHD 360
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
Query: 302 SIIYECFQGELEVVKEIPK--------------------NTISGNDQNTEKGSDGGDDHD 341
+II CF GEL + + K N I+ N + + D + +
Sbjct: 396 NIIDYCFDGELIIKTKKTKDDMTEEGTHYDGKNDTTGSTNYIAHNQNDNSQYEDDNEFSE 455
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
N + PF L L LP PP+FK E NIIPQ+
Sbjct: 456 NKNYIFKKTPFRTLSLKLPNPPIFKSTTESNIIPQV 491
>gi|68075081|ref|XP_679457.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium berghei strain ANKA]
gi|56500209|emb|CAH98685.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein,
putative [Plasmodium berghei]
Length = 634
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 142/222 (63%), Gaps = 33/222 (14%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYL T+NR +LDFDFEK CS+SLSNL+VYACLVCG Y+QG G+ ++AYTH+LE H+
Sbjct: 86 RVCPYLRTINRNLLDFDFEKLCSISLSNLHVYACLVCGLYFQGIGRGTYAYTHALEKNHY 145
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------- 191
V+INL T K C+P+ YEI+D SL DI++
Sbjct: 146 VFINLETCKTCCIPENYEIHDASLNDIKYFLKPVYNKEQVEHLCNNLILGKSLDGADFFP 205
Query: 192 --VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
VGLNN+K TD+ NV IQ L + PLRN L+ E+ ++ L+ +L +KI++ +N
Sbjct: 206 GCVGLNNLKHTDYCNVIIQLLCCIVPLRNMLLLYESKQNIAKNLIVVLAELLKKIYNPKN 265
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
FKG VSPHEFLQAV SKK F+IG +++P+ F W++N +H
Sbjct: 266 FKGVVSPHEFLQAVGIESKKNFKIGTKNDPLNFFLWIINKIH 307
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 22/99 (22%)
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTET------------- 347
T+II CF GEL + + K+ I+ + E +D + I
Sbjct: 387 TNIIDYCFDGELIIKTKKTKDDITEEGTSYEGKNDTTGRTNYIAHNQNDNNNNQYEDDNE 446
Query: 348 ---------SRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ PF L L LP PP+FK E NIIPQ+
Sbjct: 447 FSENKKYIFKKTPFRTLSLKLPNPPIFKSTTESNIIPQV 485
>gi|50552960|ref|XP_503890.1| YALI0E13167p [Yarrowia lipolytica]
gi|49649759|emb|CAG79483.1| YALI0E13167p [Yarrowia lipolytica CLIB122]
Length = 440
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 164/294 (55%), Gaps = 46/294 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDTV+R LDFDFEK CSVSLS NVY CLVCG+Y+QGRG+ SHAY HS+ HHV++N
Sbjct: 12 YLDTVDRSKLDFDFEKVCSVSLSPTNVYCCLVCGRYFQGRGKSSHAYFHSINDDHHVFLN 71
Query: 167 LRTEKVYCLPDGYEINDPSLEDIR--------------------------------HVGL 194
+ T +VY LP+GY+ L+DI+ ++G+
Sbjct: 72 METYEVYVLPEGYKETSRDLDDIKSVANPVYEESQINRLDVDKTSYTLTNKVYRPGYIGI 131
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
NNIK +D+ NV +Q L PLRN+ L+ + +S +V ++R+IW+ R FK V
Sbjct: 132 NNIKHSDYANVVVQLLSHTKPLRNYLLL---HPKSESAIVSALSQISRRIWNPRAFKNHV 188
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSIIYECFQGELE 313
SPHE + K S+ +F Q++P +F+ WLL H L + K +S+I+ FQG+L
Sbjct: 189 SPHELVNLAEKLSQGKFSANFQADPCQFLVWLLVQTHLGLGGSSKPGSSLIHHIFQGKLN 248
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
E + +E+ G D +++T+ +PFL+L LDLP +FKD
Sbjct: 249 KTTE----------KLSEREVSGKSVFDVKSSKTTCIPFLLLTLDLPAESVFKD 292
>gi|449666515|ref|XP_002155067.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Hydra magnipapillata]
Length = 427
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 168/288 (58%), Gaps = 56/288 (19%)
Query: 146 RGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------------- 191
RG SHAYTHS+ GHHVY+NL T K YCLPD YEI DPSLEDI++
Sbjct: 1 RGNNSHAYTHSVHLGHHVYLNLHTLKFYCLPDNYEIIDPSLEDIKYLLQPTFSKEHIRLL 60
Query: 192 -------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP 232
VGLNNIK D++NV +Q+L+ V P+RN+FL E+Y + K P
Sbjct: 61 DSSTKVSRALNGTVYIPGVVGLNNIKANDYLNVVLQALVFVPPIRNYFLRVEHYNNIKRP 120
Query: 233 -------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRF---RIGVQSNPVEF 282
LV RFG+LTRKIW+ RNFK VSPHE LQ+V+ SK R ++ +P+EF
Sbjct: 121 PGDIMFPLVQRFGELTRKIWNPRNFKSHVSPHEMLQSVLIFSKLRHSFTKVNHYGDPIEF 180
Query: 283 MSWLLNTLHSDLRNTKKN-TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHD 341
+SW +N LH L TKK+ +S+IY+ F+GE+ K+ + + +D+ E+ +++
Sbjct: 181 LSWFINALHFTLNGTKKSKSSVIYKAFRGEM---KQFYRKLPATDDKEIERKLLESEEYK 237
Query: 342 NITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ------LQRLSGH 383
+ + PFL L LD+P PLFKD +E+N IPQ LQ+ +GH
Sbjct: 238 EKESVS---PFLYLTLDVPASPLFKDELEQNAIPQVPLINLLQKFNGH 282
>gi|294659093|ref|XP_461434.2| DEHA2F25168p [Debaryomyces hansenii CBS767]
gi|202953612|emb|CAG89849.2| DEHA2F25168p [Debaryomyces hansenii CBS767]
Length = 534
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 178/343 (51%), Gaps = 53/343 (15%)
Query: 70 RTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLS 129
+T + D +DE+ L Q + D LDT+NR +LDFDFEK CS++LS
Sbjct: 38 KTDSKSEADSSDDEE-LPQYLLQNSPMQDASANDDGFCLDTINRYLLDFDFEKVCSITLS 96
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPS---- 185
N+NVY CLVCGK++QGR + SHAY HS+ A H V+INL T K Y LPD YE+
Sbjct: 97 NVNVYCCLVCGKFFQGRSKSSHAYLHSVNANHRVFINLETAKTYILPDNYELTTQKALKH 156
Query: 186 LEDIR---------------------------------HVGLNNIKETDFVNVTIQSLMR 212
L DI+ +GLNN+ D+ NV Q+L
Sbjct: 157 LSDIKLLLNPVYSKVAIQNLSKKVQIGHDLNHKPYVVGFIGLNNLSANDYANVIFQALSH 216
Query: 213 VTPLRNFFL---IPE----NYRHC-KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVM 264
+ P+R+F+L IPE N R KS L + FG L RK+W + FKG +SPHE LQ +
Sbjct: 217 IPPIRDFYLSLTIPEKKDLNERIIRKSQLNNLFGLLVRKLWSSYLFKGHISPHELLQYIS 276
Query: 265 KASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEVVKEIPKNTI 323
SKK+F I Q +P FM WLLN LH L ++ K N++I + QG ++ V IP
Sbjct: 277 SVSKKKFGIAEQKSPKAFMVWLLNQLHIQLIKSIKNNSTIFSKSLQGSIQ-VSTIP--IT 333
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFK 366
+ ++ T K D D +T + F +L LD+P LF+
Sbjct: 334 ATTNKLTNKVDFNVQDKDKVTNLSK---FWVLSLDIPGNALFQ 373
>gi|224015415|ref|XP_002297362.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220967962|gb|EED86325.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 487
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 180/326 (55%), Gaps = 64/326 (19%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSL-SNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
CPYLDT+NR LDFDF CS +L S+ ++YACLVCGK+++G+G+++ AYTHS+E GH V
Sbjct: 9 CPYLDTINRTHLDFDFSPHCSSTLESSPHIYACLVCGKFFRGKGRQTPAYTHSVEEGHFV 68
Query: 164 YINLRTEKVYCLPDGYEIN---DPSLEDIR------------------------------ 190
+++L +CLPDGYEI+ +PSL DI
Sbjct: 69 FVHLSNGTFWCLPDGYEISTKEEPSLSDISLALNPSFTSEEVGRLDDNQELARDLFGRRY 128
Query: 191 ---HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGD 239
VGLNN+ +TD++N +Q+L V PLR+FFL+ P +Y + SPL F
Sbjct: 129 LPGFVGLNNLNKTDYLNCVVQALAHVRPLRDFFLLAGSQTSHQPLSYANF-SPLAKAFSL 187
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----- 294
L R +W + FK V PH +QAV AS KR+ +G Q+ +F++WLL+ LH +
Sbjct: 188 LLRNMWSSHRFKSNVDPHMLVQAVSVASNKRYHVGKQAEAGDFLAWLLHQLHVGIGGSVG 247
Query: 295 --RNTKKNTSIIYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
+ + +++I++ F G++E V K++ + T+ T S+ ++ TET
Sbjct: 248 KKKRSSGGSTVIHQTFMGKVETVARKQLKRETL------TSLASETVIVEESTVTETD-- 299
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQ 376
FL L LD+P PLFKD +IPQ
Sbjct: 300 -FLQLTLDIPEKPLFKDADGGLVIPQ 324
>gi|150865930|ref|XP_001385345.2| ubiquitin specific protease [Scheffersomyces stipitis CBS 6054]
gi|149387186|gb|ABN67316.2| ubiquitin specific protease [Scheffersomyces stipitis CBS 6054]
Length = 489
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 177/326 (54%), Gaps = 52/326 (15%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
++D YLDT++R +LDFDFEK CSV+LSN NVY CLVCGKY+ GR + S +YTHSLE
Sbjct: 41 AQQDTLYLDTIHRPLLDFDFEKVCSVTLSNTNVYCCLVCGKYFSGRSRTSPSYTHSLENN 100
Query: 161 HHVYINLRTEKVYCLPDGYEIND----PSLEDIR-------------------------- 190
HHV+INL EK Y LP+ YEI SL DI
Sbjct: 101 HHVFINLHNEKYYVLPENYEITSYSALKSLRDINNFLNPKYTKSDIENLPVTARDLDHKS 160
Query: 191 ----HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR------HCKSPLVHRFGDL 240
+VGLNNI D+ NV IQ+L + P+RN++L + + SPL + FG L
Sbjct: 161 YDVGYVGLNNISANDYSNVVIQALSHIVPIRNWYLSLSHRQDLNARLESMSPLNYNFGIL 220
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKK 299
RK+W ++ VSPHEFLQ + +K +F I QS P + + WLLN LH L ++ KK
Sbjct: 221 VRKLWSKYLYRNHVSPHEFLQYLSSTTKNQFSITRQSTPKKLLVWLLNNLHLQLSKSIKK 280
Query: 300 NTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+++++ + +G ++V + +T ND+ E +D +++++ F +L LDL
Sbjct: 281 SSTVLSDNLRGRIKVT-SMEVHTKEVNDK-VEFETDENSAKESVSS------FWVLTLDL 332
Query: 360 PPPPLFKDVM---EKNIIPQLQRLSG 382
PLF DV E + LQ+ G
Sbjct: 333 ISSPLFMDVTKIQEVALTKLLQKYDG 358
>gi|429328896|gb|AFZ80655.1| ubiquitin carboxyl-terminal hydrolase, putative [Babesia equi]
Length = 395
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 150/251 (59%), Gaps = 39/251 (15%)
Query: 88 NGYGQGQ---RSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQ 144
NG G + S+ ++ +CPYL T+NR +LDFDFEK CS+SLSN +VYACL+CGKY+Q
Sbjct: 137 NGVGDKKIEKNSQTADIPVNCPYLGTINRHLLDFDFEKICSISLSNKHVYACLICGKYFQ 196
Query: 145 GRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH------------- 191
GRG+ +H YTH+LE GH++++NL VYCLP+ Y ++D SL DI+
Sbjct: 197 GRGKNTHCYTHALEEGHYLFMNLEDCTVYCLPENYRVDDASLNDIKDFLKPKFTKSDVEK 256
Query: 192 --------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR-HCK 230
+GLNN+K TDF NV IQ + PLRN L+ + R
Sbjct: 257 ISKEVLYGKALDGTDFIPGCIGLNNLKNTDFFNVIIQMFCCIVPLRNKLLLMDVERVQPP 316
Query: 231 SPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
++ +L RK ++ NFKG VSPHEFLQAV +S ++IG+Q +PV +SWLLN L
Sbjct: 317 DAVLSTLVELVRKNFNPHNFKGIVSPHEFLQAVGVSSSGLYKIGIQGDPVALLSWLLNRL 376
Query: 291 HSDLRNTKKNT 301
H +R KK+T
Sbjct: 377 H--VRLHKKHT 385
>gi|219122453|ref|XP_002181559.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406835|gb|EEC46773.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 474
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 167/321 (52%), Gaps = 69/321 (21%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSL-SNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
CPYLDT+ R +LDFDFE CS+S+ + ++Y CLVCGKY++GRG ++ AYTHS+E H V
Sbjct: 19 CPYLDTIQRSLLDFDFEPACSISMQTGPHIYGCLVCGKYFRGRGIQTPAYTHSVEESHFV 78
Query: 164 YINLRTEKVYCLPDGYEINDPSLEDIR--------------------------------- 190
+++L +CLPD YEI D SL DI+
Sbjct: 79 FVHLTNGTFHCLPDDYEIKDTSLVDIQDALHPKFSPSEIRTIDTHTELSRDLFGRRYLPG 138
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPLVHR----FG 238
VGLNN+ +TD VN +Q+L V PLR+FFL + + L H FG
Sbjct: 139 FVGLNNLHKTDCVNAAVQALAHVQPLRDFFLSKSHNESLLSSKKSQASNRLAHHVAQCFG 198
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
+L RKIW ++ FK V PH +QA+ ASKKRF++GVQ+ E ++WLL+ LH +
Sbjct: 199 ELVRKIWSSKRFKSTVDPHMLIQAIATASKKRFKVGVQAEAGELVAWLLHRLHVGTGGGR 258
Query: 299 K-NTSIIYECFQGELEVVKEIPKNTISGNDQN--TEKGSDGGDDHDNITTETSRMPFLML 355
K +SI+++ FQG K + NDQ E D H FL L
Sbjct: 259 KAGSSIVHKTFQG---------KEGLKMNDQEVLVEIEETATDTH-----------FLQL 298
Query: 356 GLDLPPPPLFKDVMEKNIIPQ 376
LD+P PLF+D +IPQ
Sbjct: 299 TLDIPEKPLFRDEDGGLVIPQ 319
>gi|115398075|ref|XP_001214629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192820|gb|EAU34520.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 626
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 200/426 (46%), Gaps = 95/426 (22%)
Query: 1 MTKKRKNNGSADEDRHV-----KSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEY 55
M KR+ S +ED K +V + PR G +PL + E++E
Sbjct: 44 MMSKRQAELSLEEDLSAGSPASKKARVEDDIDEDDPRRG----AVPLQRAPGQEYEQDER 99
Query: 56 GGRGDSGA--KVGQNGRTGEDDD----EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLD 109
G A + G+ R D+ D DE EDD ++S +E D YLD
Sbjct: 100 RGNDILAAADREGEELREAAQDNGAESSDIDEAEDDRPAIAAPKRQSAPMEGYSDL-YLD 158
Query: 110 TVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRT 169
T+NRQ+LDFDFEK CSVSLSN+NVYACL
Sbjct: 159 TINRQILDFDFEKLCSVSLSNINVYACL-------------------------------- 186
Query: 170 EKVYCLPDGYEINDPSLEDIRHV---------------------------------GLNN 196
KVY LP+GYE+ + SL+DI++V G+NN
Sbjct: 187 -KVYVLPEGYEVKNKSLDDIKYVVDPYYTKEEVNKLDKEVHDAFDLAGNRYRPGFVGMNN 245
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSP 256
IK D++NV +Q L V P+RN+FL+ E L RF L RK+W+ + F+ VSP
Sbjct: 246 IKANDYLNVVVQLLAHVYPIRNYFLLHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSP 305
Query: 257 HEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK----NTSIIYECFQGEL 312
HE LQ + S KRF + QS+PVEFMSW LN LH L +KK TS+I FQG L
Sbjct: 306 HELLQEIALRSSKRFTLTQQSDPVEFMSWFLNNLHLSLGGSKKPSKTPTSVIQAAFQGHL 365
Query: 313 EVVKEIPKNTISGNDQNTE-KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+ E T + QN ++ G + +T P+L+L LDLPP PLF+ +
Sbjct: 366 RI--ESQAITAHSDTQNARLVFTESGTINSQVT------PYLILTLDLPPTPLFQSANRE 417
Query: 372 NIIPQL 377
+IIPQ+
Sbjct: 418 SIIPQV 423
>gi|448080029|ref|XP_004194524.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
gi|359375946|emb|CCE86528.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
Length = 514
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 184/373 (49%), Gaps = 57/373 (15%)
Query: 56 GGRGDSGAKVGQNGRTGEDDDEDKDE-DEDDLANGYGQGQRSRLVEVRRD-CPYLDTVNR 113
RG N +T D + D DE+D + + +RD YLDT++R
Sbjct: 2 SKRGIEDDDSTYNKKTRHDTNTALDNPDENDQTLHDSKASEQTVNNSKRDNTYYLDTIDR 61
Query: 114 QVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY 173
LDFDFEK CSV+LSN+NVY CLVCG + QGR + S AY HS+ + H +++NL TEK +
Sbjct: 62 SKLDFDFEKVCSVTLSNVNVYCCLVCGTFLQGRSKSSPAYLHSINSSHRMFLNLHTEKFF 121
Query: 174 CLPDGYEIND----PSLEDIR---------------------------------HVGLNN 196
LPD YE++ L+DIR +GLNN
Sbjct: 122 ILPDNYELSSNIVTRHLDDIRLLLNPRYDSRRIKDLSSKVLKGYDLRNHAYDVGFIGLNN 181
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPLVHRFGDLTRKIWHAR 248
I+ D+ NV I +L + P+R+F+L + KS L H F L +K+W
Sbjct: 182 IQNNDYANVIIHALSHIAPIRDFYLGLSLEKNQTEQELVSRKSVLNHNFEILLKKLWSQH 241
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSIIYEC 307
FK VSPHEFLQ V + K+F +++P +F++WLLN LHSDL T + SI+ +
Sbjct: 242 LFKNHVSPHEFLQVVSSITSKKFSTTSETSPKDFLAWLLNRLHSDLVKTFARKRSILSKT 301
Query: 308 FQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
QG +EV+ TI + E + ++ + ML LDLPP PLFK+
Sbjct: 302 LQGNVEVI------TIPIEAKTNEYTLKVDFSIQEEKKSSKKINYWMLSLDLPPDPLFKN 355
Query: 368 VME---KNIIPQL 377
+ N IPQ+
Sbjct: 356 SVTGKYGNEIPQV 368
>gi|448084506|ref|XP_004195622.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
gi|359377044|emb|CCE85427.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
Length = 514
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 174/320 (54%), Gaps = 55/320 (17%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R LDFDFEK CSV+LSN+NVY CLVCG + QGR + S AY HS+ + H +++N
Sbjct: 55 YLDTIDRSKLDFDFEKVCSVTLSNVNVYCCLVCGTFLQGRSKSSPAYLHSINSSHRIFLN 114
Query: 167 LRTEKVYCLPDGYEIND----PSLEDIR-------------------------------- 190
L TEK + LPD YE++ L+DIR
Sbjct: 115 LHTEKFFILPDNYELSSNIVTRHLDDIRLLLNPRYDIRRIKELSTKVFKGYDLRNHAYDV 174
Query: 191 -HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL---IPENYRHC-----KSPLVHRFGDLT 241
+GLNNI+ D+ NVTIQ+L + +R+F+L + EN KS L H F L
Sbjct: 175 GFIGLNNIQNNDYANVTIQALSHIVLIRDFYLSLSLEENQSEHELVSRKSVLNHNFEVLL 234
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKN 300
+K+W FK VSPHEFLQ V + K+F +++P +F+ WLLN LHSDL T +
Sbjct: 235 KKLWSQHLFKNHVSPHEFLQVVSSITSKKFSTTSETSPKDFLVWLLNRLHSDLVKTFSRK 294
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
SI+ + QG +EV+ IP + ++ T K + + +T+ + ML LDLP
Sbjct: 295 RSILSKTLQGNVEVIT-IPIE--AKTNEYTLKVDFSIQEEKKSSKKTN---YWMLSLDLP 348
Query: 361 PPPLFKDVME---KNIIPQL 377
P PLFK+ + N IPQ+
Sbjct: 349 PDPLFKNSVSGKYGNEIPQV 368
>gi|190345136|gb|EDK36962.2| hypothetical protein PGUG_01060 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 158/313 (50%), Gaps = 49/313 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
Y+DT+NR +DFDFEK CSVSLS NVY CLVCGKY+QGR S AY HS+E HHV++N
Sbjct: 31 YIDTINRNKIDFDFEKLCSVSLSKSNVYCCLVCGKYFQGRSVSSPAYNHSIEWNHHVFMN 90
Query: 167 LRTEKVYCLPDGYEIN-----------------------------DPSLEDIRH------ 191
L+T K Y LP+ Y++ +PS D+ H
Sbjct: 91 LQTHKTYILPEDYQVTSPKALKHLQDIIYLLNPTYSQQDVARLDTEPSAYDLTHKPYFVG 150
Query: 192 -VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN-----YRHCKSPLVHRFGDLTRKIW 245
+GLN I + D+ NV +Q+L + P+R+F L+ N K PLV FG + RKIW
Sbjct: 151 YIGLNKISKNDYSNVIVQALAHIQPIRDFLLLLPNDSLYEVLEHKYPLVSMFGLMVRKIW 210
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSII 304
FK VSPHEFLQ V SKK F I QS+P FM W LN LHS L R K +I+
Sbjct: 211 SRHLFKPHVSPHEFLQLVSLMSKKSFSITHQSSPKHFMVWFLNQLHSQLTRAIGKKRTIL 270
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ QGE+ +V IP +D + + + S F L L L P
Sbjct: 271 SKTLQGEI-IVTTIPVVQKQASDSTVQF------ERQESMKKISISKFWHLSLSLGPASA 323
Query: 365 FKDVMEKNIIPQL 377
K + +PQ+
Sbjct: 324 LKIQDTNDTVPQV 336
>gi|146423511|ref|XP_001487683.1| hypothetical protein PGUG_01060 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 158/313 (50%), Gaps = 49/313 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
Y+DT+NR +DFDFEK C VSLS NVY CLVCGKY+QGR S AY HS+E HHV++N
Sbjct: 31 YIDTINRNKIDFDFEKLCLVSLSKSNVYCCLVCGKYFQGRSVSSPAYNHSIEWNHHVFMN 90
Query: 167 LRTEKVYCLPDGYEIN-----------------------------DPSLEDIRH------ 191
L+T K Y LP+ Y++ +PS D+ H
Sbjct: 91 LQTHKTYILPEDYQVTSPKALKHLQDIIYLLNPTYSQQDVARLDTEPSAYDLTHKPYFVG 150
Query: 192 -VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN-----YRHCKSPLVHRFGDLTRKIW 245
+GLN I + D+ NV +Q+L + P+R+F L+ N K PLV FG + RKIW
Sbjct: 151 YIGLNKISKNDYSNVIVQALAHIQPIRDFLLLLPNDSLYEVLEHKYPLVSMFGLMVRKIW 210
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSII 304
FK VSPHEFLQ V SKK F I QS+P FM W LN LHS L R K +I+
Sbjct: 211 SRHLFKPHVSPHEFLQLVSLMSKKSFSITHQSSPKHFMVWFLNQLHSQLTRAIGKKRTIL 270
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ QGE+ +V IP +D + + + S + F L L L P
Sbjct: 271 SKTLQGEI-IVTTIPVVQKQASDSTVQF------ERQESMKKISILKFWHLSLSLGPASA 323
Query: 365 FKDVMEKNIIPQL 377
K + +PQ+
Sbjct: 324 LKIQDTNDTVPQV 336
>gi|376319206|ref|NP_001243657.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 4 [Homo sapiens]
gi|410035306|ref|XP_003949873.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
gi|194379788|dbj|BAG58246.1| unnamed protein product [Homo sapiens]
Length = 462
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 167/317 (52%), Gaps = 73/317 (23%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+N F F + GRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTIN------SFSPFPT-------------------GRGLKSHAYIHSVQFSHH 59
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 60 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 119
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 120 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 179
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 180 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 239
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 240 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 293
Query: 361 PPPLFKDVMEKNIIPQL 377
PL+KD E+ IIPQ+
Sbjct: 294 TAPLYKDEKEQLIIPQV 310
>gi|389586106|dbj|GAB68835.1| ubiquitin carboxyl-terminal hydrolase, partial [Plasmodium
cynomolgi strain B]
Length = 287
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 135/215 (62%), Gaps = 37/215 (17%)
Query: 96 SRLV---EVR-RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
+RLV VR R CPYL T+NR +LDFDFEK CS+S+SNL+VYACLVCG Y+QG G+ ++
Sbjct: 73 ARLVPRGAVRGRVCPYLRTINRNLLDFDFEKLCSISMSNLHVYACLVCGLYFQGIGKGTY 132
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------------------- 191
AYTH+LE H+V+INL T K CLP+ YEI D SL DI++
Sbjct: 133 AYTHALEKNHYVFINLETCKTCCLPENYEIEDASLNDIKYFLKPMYTIQQVEYICRNSIL 192
Query: 192 -------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFG 238
VGLNN+K TD+ NV IQ + + PLRN+FLI +N ++ ++
Sbjct: 193 GKSLDGADFFPGFVGLNNLKNTDYCNVIIQLVCSIIPLRNYFLIFQNKKYMTKNIISSLS 252
Query: 239 DLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+L +KI++ RNFKG VSPHEFLQ V SKK F+I
Sbjct: 253 ELIKKIFNPRNFKGVVSPHEFLQTVGIESKKNFKI 287
>gi|332239227|ref|XP_003268808.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 3
[Nomascus leucogenys]
Length = 462
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 167/317 (52%), Gaps = 73/317 (23%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+N +L F GRG KSHAY HS++ HH
Sbjct: 25 RHCPYLDTIN-SLLPFP------------------------TGRGLKSHAYIHSVQFSHH 59
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHV------------------------------ 192
V++NL T K YCLPD YEI D SLEDI +V
Sbjct: 60 VFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLP 119
Query: 193 ---GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTR 242
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L R
Sbjct: 120 GIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMR 179
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNT 301
K+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK
Sbjct: 180 KLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKK 239
Query: 302 SIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+I+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 240 TIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLP 293
Query: 361 PPPLFKDVMEKNIIPQL 377
PL+KD E+ IIPQ+
Sbjct: 294 TAPLYKDEKEQLIIPQV 310
>gi|332239225|ref|XP_003268807.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2
[Nomascus leucogenys]
Length = 449
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 155/275 (56%), Gaps = 48/275 (17%)
Query: 145 GRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV------------ 192
GRG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI +V
Sbjct: 29 GRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIAN 88
Query: 193 ---------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS 231
GLNNIK D+ N +Q+L V PLRN+FL +NY++ K
Sbjct: 89 LDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKR 148
Query: 232 P-------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
P LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+S
Sbjct: 149 PPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLS 208
Query: 285 WLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDN 342
W LN LHS L KK +I+ + FQG + + K++P + ++ + D++
Sbjct: 209 WFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQE 265
Query: 343 ITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 266 TMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 297
>gi|406604319|emb|CCH44221.1| U4/U6.U5 tri-snRNP-associated protein [Wickerhamomyces ciferrii]
Length = 433
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 154/294 (52%), Gaps = 57/294 (19%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT++R+ LDFDFEK CSVSL+N+N+Y CL CGKY+QGR S A+ HS+ HHV+IN
Sbjct: 21 YLDTIDRKKLDFDFEKICSVSLNNINIYGCLTCGKYFQGRSPNSVAFNHSILENHHVFIN 80
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRH---------------------------------VG 193
KVY LP+ YE+ SL DI++ VG
Sbjct: 81 FNNFKVYILPENYEVKSNSLNDIKYQILPSYTQEDLKKFNDPGFKARDLNGNEYVPGYVG 140
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
LNN+K D+ NV +QS+ V+ +R+ L+ + K L RF L +K+W ++ FK
Sbjct: 141 LNNMKNNDYSNVILQSISHVSLIRDKLLL-SSLDSYKDELNKRFIILVKKLWSSKLFKNH 199
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE 313
+SPHE LQ + S K F I Q +P +F+ W LNTL+ ++ N SI+ + QG++
Sbjct: 200 ISPHELLQYISILSNKSFGINEQKDPKDFLIWFLNTLNKTFKSD--NDSILSKAIQGKIL 257
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
+ + P G + +ITT+ F +L L+LP P KD
Sbjct: 258 IQNQKP----------------GSKEFKDITTK-----FWLLNLELPTVPFLKD 290
>gi|76156067|gb|AAX27305.2| SJCHGC05849 protein [Schistosoma japonicum]
Length = 251
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 127/220 (57%), Gaps = 46/220 (20%)
Query: 72 GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNL 131
GE D+E + + N + RSR CPYLDT+ R +LDFDFEK CS+SLS+L
Sbjct: 36 GESDEEPVRTGNEAVFNDMNEDTRSR------SCPYLDTIRRNMLDFDFEKLCSISLSHL 89
Query: 132 NVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH 191
NVYACL+CGKY+QGRG +HAYTHS+ HHV++NL T + YCLPD YEI D SLEDI +
Sbjct: 90 NVYACLICGKYFQGRGNSTHAYTHSVSENHHVFLNLETRRFYCLPDDYEILDGSLEDITY 149
Query: 192 ---------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRN 218
VGLNNIK D+ NV +Q L ++PLR+
Sbjct: 150 LLNPTFSTSEILALDSSSKMVRAYNGLTYYPGVVGLNNIKANDYCNVILQMLSHISPLRD 209
Query: 219 FFLIPENYRHCKSP-------LVHRFGDLTRKIWHARNFK 251
+FL +N+ + + LV RF +L RK+W+ RNFK
Sbjct: 210 YFLNIKNFDNLPTISGDQMMLLVQRFSELIRKLWNPRNFK 249
>gi|363755536|ref|XP_003647983.1| hypothetical protein Ecym_7334 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892019|gb|AET41166.1| hypothetical protein Ecym_7334 [Eremothecium cymbalariae
DBVPG#7215]
Length = 472
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 173/328 (52%), Gaps = 47/328 (14%)
Query: 73 EDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLN 132
E D+D+D++ L N + E R YLDT++++ LDFD EK C+V+LSN+N
Sbjct: 7 EISDDDEDDNYQALRNDNSLKRVKLFTENER---YLDTIDKKKLDFDLEKICAVTLSNIN 63
Query: 133 VYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE-INDPSLEDIRH 191
VY+CLVCGKY QGR + S A+ HS+E H V+IN+++ K Y LPD Y+ IN SLE I++
Sbjct: 64 VYSCLVCGKYLQGRDEGSPAFAHSMEENHRVFINIQSLKTYVLPDDYQVINSQSLECIKY 123
Query: 192 ------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
VGLNNI D+ NV I L + P+R++ L
Sbjct: 124 CFRPTFEDSAVSEFPVPCFDLYNNKYLNGFVGLNNISSNDYSNVIILLLSHIKPVRDYLL 183
Query: 222 IPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
+ +N + +F L RKIW + K VSPHEFLQ V S K F + + +P
Sbjct: 184 LNDNLLKKDDVFLQKFTLLIRKIWSPKLPKKHVSPHEFLQHVSSISDKAFSLDRRGDPRS 243
Query: 282 FMSWLLN-TLHSDLRNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDD 339
F+ +++N + S R +K + + QGE+ + +I GN+ + +
Sbjct: 244 FLLFIVNKIMKSSNRGLRK---LFTKQLQGEVSIYTTKIEPVMEEGNNIKFVR------N 294
Query: 340 HDNITTETSRMPFLMLGLDLPPPPLFKD 367
+N+++ T + F +L LDLPP PLFKD
Sbjct: 295 EENVSSNTVK--FWILSLDLPPKPLFKD 320
>gi|395853581|ref|XP_003799283.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Otolemur
garnettii]
Length = 479
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 140/274 (51%), Gaps = 72/274 (26%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
C +R VLDFDFEK CS+SLS++N YACLVCGKY+QGRG KSHAY HS++ HHV+
Sbjct: 125 CFVFTKASRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVF 184
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE 224
+NL T K YCLPD Y+ NIK P FL
Sbjct: 185 LNLHTLKFYCLPDNYK---------------NIKR--------------PPGDIMFL--- 212
Query: 225 NYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q
Sbjct: 213 --------LVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQ-------- 256
Query: 285 WLLNTLHSDLRNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
+I+ + FQG + + K++P + ++ + D++
Sbjct: 257 -----------------AIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHN---DEYQET 296
Query: 344 TTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 297 MVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 327
>gi|397635035|gb|EJK71690.1| hypothetical protein THAOC_06844 [Thalassiosira oceanica]
Length = 631
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 135/255 (52%), Gaps = 68/255 (26%)
Query: 105 CPYLDTVNRQVLDFDF-EKFCSVSL-SNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
CPYLDT+NR LDFD + CSV+L ++ ++YACLVCGK+++GRG+++ AYTH++E GH+
Sbjct: 20 CPYLDTINRPALDFDAPDHACSVTLDASPHIYACLVCGKFFRGRGRQTPAYTHAVEEGHY 79
Query: 163 VYINLRTEKVYCLPDGYEI--NDPSLEDI------------------------------- 189
V+++L +CLPDGYE+ ++PSL DI
Sbjct: 80 VFVHLTNGTFWCLPDGYEVPRSEPSLRDIGLALHPKFEPAEVAGLDGNDELARDLFGRRY 139
Query: 190 --RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK----------------- 230
VGLNN+ +TD++N +Q+L V PLR++FL+ N+
Sbjct: 140 LPGFVGLNNLSKTDYLNAVVQALAHVRPLRDYFLLAPNFDELGGGAGEAPAGGGGKRRLA 199
Query: 231 --------------SPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
SPL F L R +W + FK V PH +QAV AS KR+ +G Q
Sbjct: 200 GQQQQVRRLAYSEFSPLARSFSLLLRNMWSSHRFKSNVDPHMLVQAVSAASNKRYHVGRQ 259
Query: 277 SNPVEFMSWLLNTLH 291
+ EF++WLL+ LH
Sbjct: 260 AEAGEFLAWLLHQLH 274
>gi|255710529|ref|XP_002551548.1| KLTH0A02046p [Lachancea thermotolerans]
gi|238932925|emb|CAR21106.1| KLTH0A02046p [Lachancea thermotolerans CBS 6340]
Length = 470
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 160/316 (50%), Gaps = 49/316 (15%)
Query: 106 PYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYI 165
PYL+TV+ + LDFD EK CSV+LS LNVY CLVCG+Y QGRG+K+ A+ HS++ HHV+I
Sbjct: 37 PYLETVDVRKLDFDLEKLCSVTLSPLNVYCCLVCGRYLQGRGEKTVAFLHSIQEDHHVFI 96
Query: 166 NLRTEKVYCLPDGYEINDPSL--------------EDIRH-----------------VGL 194
N + K Y LP+ E+ L ED+ +GL
Sbjct: 97 NFVSLKTYLLPENREVQGVQLLETIKFAISPKYTQEDLLQFPRMCFDKSNTPYINGFIGL 156
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
N++ + ++V IQ + +TP+R+FFL+ E+ L+ R L +K+W K +
Sbjct: 157 NDLGDNTHLSVIIQMMAHITPIRDFFLL-ESQSKIDDELIKRLALLIKKLWSPHILKAHL 215
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV 314
SP+E LQ + + +K +P FM WL+N + + KK ++ +GE+EV
Sbjct: 216 SPYELLQQLSRVNKNVNSDNRIKDPKSFMLWLINYMIAKAHPLKK---VLTRNMRGEVEV 272
Query: 315 VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP-FLMLGLDLPPPPLFKDVMEKNI 373
+ + + ++N E D T+T +P F L LDLPP LF + + N
Sbjct: 273 RSIVVREKGTTGEKNLEFFEDEA-------TKTIVLPKFWSLTLDLPPVSLFNEGSDTNS 325
Query: 374 IPQ------LQRLSGH 383
IPQ L + SGH
Sbjct: 326 IPQVTLDSLLGKFSGH 341
>gi|241957679|ref|XP_002421559.1| ubiquitin carboxyl hydrolase, putative [Candida dubliniensis CD36]
gi|223644903|emb|CAX40901.1| ubiquitin carboxyl hydrolase, putative [Candida dubliniensis CD36]
Length = 391
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 55/289 (19%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
RR D +NR+VLDFDF K CS +LS++NVY CLVCGKY++GR + S AY H++ H
Sbjct: 8 RRRIEAGDVINREVLDFDFAKVCSQTLSSINVYCCLVCGKYFEGRSESSPAYNHAISTNH 67
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------H 191
Y++ TEK Y LP+G EI PS +D+ +
Sbjct: 68 QKYLSFETEKFYLLPEGKEI--PSQQDVIDYLNPRYTQRDIELLPRISFDLHTKKYLVGY 125
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
VGLNNIK D+ NV +Q L + P+RN +L+ + + S L L RK+W FK
Sbjct: 126 VGLNNIKNNDYANVVVQVLAHIEPIRNHYLLMADNTNSDS-LNGHLALLIRKMWSPHLFK 184
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGE 311
++PHEF+ +V+ SKKRF + + +P F+ WLLN + YEC +GE
Sbjct: 185 SHIAPHEFMNSVIDTSKKRFTLE-KGHPKLFLVWLLNGVDGP-----------YECLRGE 232
Query: 312 LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
+E+ T + +EK + ++ T+T++ F L +D+P
Sbjct: 233 IEIT-----TTPVVPHEGSEKV-----EFVSLDTKTTQSKFWFLSVDVP 271
>gi|344302364|gb|EGW32669.1| hypothetical protein SPAPADRAFT_61740 [Spathaspora passalidarum
NRRL Y-27907]
Length = 400
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 150/298 (50%), Gaps = 45/298 (15%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
+NR++LDFDFEK CSV+LS+ N+ CL CGKY+QG S AY HS+ +GH Y+NL
Sbjct: 14 INRKLLDFDFEKTCSVTLSSNNINCCLTCGKYFQGNSPSSPAYNHSITSGHTKYLNLTNH 73
Query: 171 KVYCLPDGYEIN------------DP-----SLED--------------IRHVGLNNIKE 199
K + LP+ E DP S+E+ + +VGLNN K
Sbjct: 74 KFFVLPENTEWEGISSVQDIIYYLDPQYTKQSIEESPETALDLNNEKYLVGYVGLNNFKS 133
Query: 200 TDFVNVTIQSLMRVTPLRNFFLIPENYRHC-----KSPLVHRFGDLTRKIWHARNFKGQV 254
++NV + L + P+R+F+L+ ++H KSP+ + L RKIW FK +
Sbjct: 134 NSYINVVLHCLAHIEPIRDFYLLLPKHKHYETITRKSPINDKLSLLVRKIWSPHLFKSHI 193
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELE 313
+PHE + + + S K+F I + P F+ WL+NTLHS L + TK + + QG++E
Sbjct: 194 APHELINCISEISNKKFTIEHEQPPKNFLIWLVNTLHSQLVKTTKSKHTTFSQNLQGKIE 253
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEK 371
+ TI Q + + T S+ F +L LD+P PL ++K
Sbjct: 254 IT------TIPIISQEVKSRVEFTTIESKSKTVESK--FWLLSLDIPHNPLLTAQLDK 303
>gi|345491244|ref|XP_001607982.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Nasonia
vitripennis]
Length = 416
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 124/195 (63%), Gaps = 15/195 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
+G+NNIK D+ NV +Q+L VTPLR++FL NY K P L+ RFG+L RK+
Sbjct: 75 IGMNNIKANDYCNVILQALSHVTPLRDYFLRESNYSKVKRPPGDSSYQLIQRFGELMRKL 134
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-KKNTSI 303
W+ RNFK VSPHE LQAV+ SKK+F+ Q +PV+F+SW LN LH L T KK++SI
Sbjct: 135 WNPRNFKVHVSPHEMLQAVVLWSKKKFQFTEQGDPVDFLSWFLNALHLALNGTKKKDSSI 194
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
IY+ F G++ + ++IP + + ++ + ++ TE+ PFL L DLPPP
Sbjct: 195 IYKTFLGQMRIYTRKIPPLELEESQRSELLNT---VEYGETVTES---PFLYLTCDLPPP 248
Query: 363 PLFKDVMEKNIIPQL 377
PLFKD +NIIPQ+
Sbjct: 249 PLFKDQHAENIIPQV 263
>gi|209875567|ref|XP_002139226.1| ubiquitin carboxyl-terminal hydrolase family protein
[Cryptosporidium muris RN66]
gi|209554832|gb|EEA04877.1| ubiquitin carboxyl-terminal hydrolase family protein
[Cryptosporidium muris RN66]
Length = 469
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 163/338 (48%), Gaps = 65/338 (19%)
Query: 101 VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAG 160
+ + CP+L T+NR VLDFD EK CSV+L N +VY CLVCG +QGRG+ S AY H+LE
Sbjct: 1 MEKKCPFLSTINRGVLDFDHEKLCSVTLRNEHVYCCLVCGTNFQGRGKGSIAYCHALEMS 60
Query: 161 HHVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------ 190
HH++INL T ++YCLPD YE+ + SL+DI+
Sbjct: 61 HHMFINLHTSRIYCLPDNYEVKEHSLDDIKQYLQPKFDKKLISILDKNCKTYDGSEYIPG 120
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-----PENYRHC-KSP---LVHRFGDLT 241
++GL N +TD +NV I L R+ PLR+FFL EN++ K P L+ ++
Sbjct: 121 YIGLYNFGKTDALNVVILLLSRIIPLRDFFLYFPIYDSENFQKISKVPLDKLMFSIIEIV 180
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV----QSN----------PVEFMSWLL 287
KI++ NFKG SP + + S + QSN P+ +SW++
Sbjct: 181 CKIFNPYNFKGMASPFVLANTIERKSNSLLPVSTNTEKQSNKTSQDTQFVDPMALLSWII 240
Query: 288 NTLHSDLRNTKKNTSIIYECF-QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE 346
+ + L K CF Q ++ K I + I G N K + N++ +
Sbjct: 241 HYMKKKLSKIKLGYQ---RCFYQDKMSKSKNIIASCIEGQVLNCTKINGIEPKSLNLSYD 297
Query: 347 TSRM-------PFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ + F+ L L++P P + ++ IPQ+
Sbjct: 298 SMKSVHGSTVNSFISLSLNIPLPSVLNPSLDSR-IPQI 334
>gi|47226447|emb|CAG08463.1| unnamed protein product [Tetraodon nigroviridis]
Length = 208
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 99/162 (61%), Gaps = 35/162 (21%)
Query: 94 QRSRLVEVRRD--CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSH 151
+R R+VE +R CPYLDT+NR VLDFDFEK CS+SLS++NVYACL+CGKY+QGRG KSH
Sbjct: 3 RRGRVVEDKRSRHCPYLDTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGLKSH 62
Query: 152 AYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------------------- 191
AYTHS++ HHV++NL T K YCLPD YEI D SLEDI +
Sbjct: 63 AYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIGGLDKQGKL 122
Query: 192 -------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
VGLNNIK D+ NV +Q+ V P
Sbjct: 123 YRAYDGTTYLPGIVGLNNIKANDYANVVLQAFCNVPPFAKLL 164
>gi|50309163|ref|XP_454587.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643722|emb|CAG99674.1| KLLA0E14125p [Kluyveromyces lactis]
Length = 477
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 171/358 (47%), Gaps = 61/358 (17%)
Query: 72 GEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCP--YLDTVNRQVLDFDFEKFCSVSLS 129
GE D D D D D +N G+ V+ +R P YLD ++ + LDFD EK CSV+LS
Sbjct: 9 GEIIDSDGDVDHD--SNKVGKID----VQQKRSVPKVYLDQIDMKKLDFDREKVCSVTLS 62
Query: 130 NLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE---INDPSL 186
NVY CL GKY QGRGQ S A+ H++E+ HHV++NL++ KVY LP+ YE + L
Sbjct: 63 RSNVYCCLSSGKYLQGRGQNSVAFKHAIESDHHVFLNLKSLKVYVLPENYEADVVPGSLL 122
Query: 187 EDIRH------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
DI + VG+NN+ + V +Q+L V P+
Sbjct: 123 SDIVYAASPRFHNSQLQTFPKVCHDLNDKRYLNGFVGMNNLTPDGYSVVVLQALAHVLPI 182
Query: 217 RNFFLIPENYRHCKSP------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKR 270
R++FL+ E+ + L+ L RK+W + + +SPHE L + SK+R
Sbjct: 183 RDYFLLGESSSGYNTDENDGPGLIGSLSLLIRKLWSCKLLRRNISPHELLNYISLVSKRR 242
Query: 271 FRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNT 330
F + +P F+ WL+++L + + T + + FQG +E+ P T+
Sbjct: 243 FPVDDSRDPRSFLLWLISSLCASKEPSLVRT--VTDQFQGHVEIT-STPIETVVD----- 294
Query: 331 EKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ------LQRLSG 382
EKG T T + F +L LDLP LF + N + Q LQ+ +G
Sbjct: 295 EKGKTMKFKKLEAATTTQKTKFWLLSLDLPQMNLFSNGNSANSVSQTKLETLLQKFNG 352
>gi|255728995|ref|XP_002549423.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133739|gb|EER33295.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 400
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 146/289 (50%), Gaps = 67/289 (23%)
Query: 109 DTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLR 168
DT++R++LDFDFEK CSV+L + NVY CLVCGKY+QGR + S AY H++ HH ++NL
Sbjct: 16 DTIHRELLDFDFEKVCSVTLDSTNVYCCLVCGKYFQGRSKSSPAYNHAITMNHHKFLNLT 75
Query: 169 TEKVYCLPDGYEI-NDPSLEDIR------------------------------HVGLNNI 197
+EK Y LP+ EI L+DI +VGLNNI
Sbjct: 76 SEKFYNLPEDIEIPKSHELQDILEYLNPRYTQRDIDLLPRISFDLNSEKYRVGYVGLNNI 135
Query: 198 KETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPH 257
K D+ NV +Q+L + P+R+++L N + L +FG+L RKIW FK +SP
Sbjct: 136 KHNDYANVVVQALAHIKPIRDYYLQLPN----GNSLNAKFGELVRKIWSPHLFKSHISPQ 191
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKE 317
F+ + + SK++F + P F+ W+LN L ++C +G++E+
Sbjct: 192 GFITTISEESKRKFTTE-KGTPKAFLLWILNKLDGP-----------FQCLRGKIEITST 239
Query: 318 --IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMP----FLMLGLDLP 360
+P +G D + +T E+ R F +L +D+P
Sbjct: 240 PIVPH--------------EGNDKVEFVTLESKRKTTESNFWILSVDVP 274
>gi|367011451|ref|XP_003680226.1| hypothetical protein TDEL_0C01260 [Torulaspora delbrueckii]
gi|359747885|emb|CCE91015.1| hypothetical protein TDEL_0C01260 [Torulaspora delbrueckii]
Length = 459
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 155/306 (50%), Gaps = 48/306 (15%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
+L+TVNR+ LDFD EK CSV+LS LNVY CLVCGKY QGR S A+ HS+ HHV+++
Sbjct: 30 FLETVNRKKLDFDAEKACSVTLSTLNVYCCLVCGKYLQGRRANSPAFLHSVNDNHHVFVD 89
Query: 167 LRTEKVYCLPDGYEINDPS----LEDIRH------------------------------V 192
T K Y LPDG EI D L IR+ +
Sbjct: 90 FITLKFYLLPDGIEIEDNGRIQLLNSIRYAIRPQFTKNEISQFPTGCQDLNDNTYFNGFI 149
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G+NN VNV + +L + PLR++ L+ + + + R RKIW + FK
Sbjct: 150 GVNNSARNKSVNVVLLALAHLRPLRDYCLLAKIDQ--EDEFTRRLALFIRKIWSVKLFKQ 207
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGEL 312
VS EFL A + + KR + ++P + + WLL + + + K SI+ E QG++
Sbjct: 208 HVSVDEFL-AFVTVNDKRSAKNL-NDPRKCLLWLLECIQT---SAPKLKSILSEACQGKV 262
Query: 313 EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
V K K I D+N + D +++++ +PF L LDLPP PLFK + N
Sbjct: 263 LVTKTGVK-VIYDEDENVK------DFTREKSSKSTSVPFWSLTLDLPPRPLFKGQINVN 315
Query: 373 IIPQLQ 378
+PQ++
Sbjct: 316 DLPQVR 321
>gi|238878183|gb|EEQ41821.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 242
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 126/233 (54%), Gaps = 48/233 (20%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
+NR+VLDFDF K CS +LS+ NVYACL+CGKY++GR S AY H++ H +Y++ TE
Sbjct: 15 INREVLDFDFAKICSQTLSSTNVYACLMCGKYFEGRSPSSPAYKHAVSTNHQMYMSFATE 74
Query: 171 KVYCLPDGYEIN---------DPSLED------------------IRHVGLNNIKETDFV 203
K Y LP E++ +P + +VGLNNIK+ D+
Sbjct: 75 KFYELPQDREVSPVQDVIDYYNPRYTPRDIDLLPRISFDLHKKYLVGYVGLNNIKKNDYA 134
Query: 204 NVTIQSLMRVTPLRNFFLI--PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
NV +Q L + P+RN++L+ P N PL G L RK+W FK ++PHEF+
Sbjct: 135 NVVVQVLAHIEPVRNYYLLETPTN------PLNVHLGLLIRKMWSPHLFKSHIAPHEFMN 188
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV 314
+V + SKKRF + + +P F+ WLL N YEC +G++EV
Sbjct: 189 SVTEESKKRFTLE-KGHPKSFLLWLL------------NRGGPYECLRGKVEV 228
>gi|68482089|ref|XP_715062.1| hypothetical protein CaO19.7265 [Candida albicans SC5314]
gi|46436668|gb|EAK96027.1| hypothetical protein CaO19.7265 [Candida albicans SC5314]
Length = 242
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 125/233 (53%), Gaps = 48/233 (20%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
+NR+VLDFDF K CS +LS+ NVYACL CGKY++GR S AY H++ H +Y++ TE
Sbjct: 15 INREVLDFDFAKICSQTLSSTNVYACLACGKYFEGRSPSSPAYKHAVSTNHQMYMSFATE 74
Query: 171 KVYCLPDGYEIN---------DPSLED------------------IRHVGLNNIKETDFV 203
K Y LP E++ +P + +VGLNNIK+ D+
Sbjct: 75 KFYELPQDREVSPVQDVIDYYNPRYTPRDIDLLPRISFDLHKKYLVGYVGLNNIKKNDYA 134
Query: 204 NVTIQSLMRVTPLRNFFLI--PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQ 261
NV +Q L + P+RN++L+ P N PL G L RK+W FK ++PHEF+
Sbjct: 135 NVVVQVLAHIEPVRNYYLLETPTN------PLNVHLGLLIRKMWSPHLFKSHIAPHEFMN 188
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV 314
+V + SKKRF + + +P F+ WLL N YEC +G++EV
Sbjct: 189 SVSEESKKRFTLE-KGHPKSFLLWLL------------NRGGPYECLRGKVEV 228
>gi|328351655|emb|CCA38054.1| U4/U6.U5 tri-snRNP-associated protein 2 [Komagataella pastoris CBS
7435]
Length = 426
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 134/257 (52%), Gaps = 42/257 (16%)
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
E+ E+++D+ G+ +RL +VR Y +T+NR LDFDFEK C V+LS NVY C
Sbjct: 22 ENDGENDNDIGKHANDGETNRLSQVRN--LYFNTINRHKLDFDFEKKCQVTLSKSNVYCC 79
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI--NDPSLEDIRH--- 191
LVCGKY QGR S AY HSL+ HH++I+ T K + LP+G+E+ +D SL+DI+
Sbjct: 80 LVCGKYLQGRSPTSQAYLHSLDVNHHLFISFSTLKTFALPEGFEVKDHDGSLDDIKELIS 139
Query: 192 ------------------------------VGLNNIKE-TDFVNVTIQSLMRVTPLRNFF 220
+GLNN+K D+ N + +L + +RN++
Sbjct: 140 PAYTKDQVASLDKQTTTARDIDGNPYRPGFIGLNNVKGFNDYSNTVLLALGHIKAVRNYY 199
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ K G R++W ++ F+ +SP E ++ V + SK RF + Q P
Sbjct: 200 LL----NSFKDSFNQELGLFIRRMWSSKQFRPHISPAEIMRVVTEESKNRFNLTQQKTPR 255
Query: 281 EFMSWLLNTLHSDLRNT 297
+F +LL+ + +R +
Sbjct: 256 DFFLFLLHLMPHRVRKS 272
>gi|254569472|ref|XP_002491846.1| Conserved zinc-finger domain protein involved in pre-mRNA splicing
[Komagataella pastoris GS115]
gi|238031643|emb|CAY69566.1| Conserved zinc-finger domain protein involved in pre-mRNA splicing
[Komagataella pastoris GS115]
Length = 444
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 136/262 (51%), Gaps = 42/262 (16%)
Query: 77 EDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYAC 136
E+ E+++D+ G+ +RL +VR Y +T+NR LDFDFEK C V+LS NVY C
Sbjct: 40 ENDGENDNDIGKHANDGETNRLSQVRN--LYFNTINRHKLDFDFEKKCQVTLSKSNVYCC 97
Query: 137 LVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI--NDPSLEDIRH--- 191
LVCGKY QGR S AY HSL+ HH++I+ T K + LP+G+E+ +D SL+DI+
Sbjct: 98 LVCGKYLQGRSPTSQAYLHSLDVNHHLFISFSTLKTFALPEGFEVKDHDGSLDDIKELIS 157
Query: 192 ------------------------------VGLNNIKE-TDFVNVTIQSLMRVTPLRNFF 220
+GLNN+K D+ N + +L + +RN++
Sbjct: 158 PAYTKDQVASLDKQTTTARDIDGNPYRPGFIGLNNVKGFNDYSNTVLLALGHIKAVRNYY 217
Query: 221 LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
L+ K G R++W ++ F+ +SP E ++ V + SK RF + Q P
Sbjct: 218 LL----NSFKDSFNQELGLFIRRMWSSKQFRPHISPAEIMRVVTEESKNRFNLTQQKTPR 273
Query: 281 EFMSWLLNTLHSDLRNTKKNTS 302
+F +LL+ + +R + + +
Sbjct: 274 DFFLFLLHLMPHRVRKSFRGAA 295
>gi|254583656|ref|XP_002497396.1| ZYRO0F04554p [Zygosaccharomyces rouxii]
gi|238940289|emb|CAR28463.1| ZYRO0F04554p [Zygosaccharomyces rouxii]
Length = 459
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 151/308 (49%), Gaps = 50/308 (16%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
+L+T++ + LDFD EK CSV+LS LN Y CLVCGKY +GR + + A+ HS+ HHV++N
Sbjct: 29 FLETIDERKLDFDLEKRCSVTLSPLNCYCCLVCGKYLRGRSENTPAFLHSVNEDHHVFVN 88
Query: 167 LRTEKVYCLPDGYEINDPS----LEDIRH------------------------------V 192
+ KVY LPD E+ D L IR+ V
Sbjct: 89 FNSLKVYLLPDNVEVEDKGRIQILARIRNAIRPSFSREEIDNSPHECFDLNNQQYTNGFV 148
Query: 193 GL-NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
G NN D +NV + L + PLR+ FL+ ++Y + +V R G + RK+W + FK
Sbjct: 149 GFNNNASGNDSINVILSLLSHIIPLRDHFLL-QDYLE-EDEIVQRLGIIIRKLWSPKLFK 206
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSN-PVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG 310
VS EFL + I + N P + WL+N L ++ + + + I+ + FQG
Sbjct: 207 PYVSSEEFLAYISVVDPN---ISSKVNDPRQIFIWLVNNL---IKKSSELSRILSDSFQG 260
Query: 311 ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVME 370
++VV TI KG + + S +PF L LDLPP PLFKD
Sbjct: 261 NVQVV------TIPIKPVLDAKGDVVKFQRETAHEKHSTVPFWSLTLDLPPTPLFKDNRN 314
Query: 371 KNIIPQLQ 378
N +PQ++
Sbjct: 315 ANDLPQVR 322
>gi|313246467|emb|CBY35373.1| unnamed protein product [Oikopleura dioica]
Length = 492
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 93/157 (59%), Gaps = 39/157 (24%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYLDT++R +LDFDFEK CSVSLS+ NVY CL+C KY+QGRG+ +HAY H+L+ H+VY
Sbjct: 87 CPYLDTIHRAILDFDFEKLCSVSLSHNNVYCCLICSKYFQGRGKGTHAYLHALDCKHYVY 146
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIRH--------------------------------- 191
+NL K YCLPD YEI DPSL+DI +
Sbjct: 147 LNLHNAKFYCLPDNYEIVDPSLDDILYQLNPMFTQEDLKELHYYEEVMTKKLVAFRRNGS 206
Query: 192 ------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI 222
+G+NNIK D++NV IQ L +V R+ FL+
Sbjct: 207 KYWTGLIGMNNIKHNDYINVVIQGLAQVPKFRDHFLV 243
>gi|238491730|ref|XP_002377102.1| snRNP assembly factor, putative [Aspergillus flavus NRRL3357]
gi|220697515|gb|EED53856.1| snRNP assembly factor, putative [Aspergillus flavus NRRL3357]
Length = 509
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 77/86 (89%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YLDT+NR++LDFDFEK CSV+LSN+NVYACLVCGKY+QGRG KSHAY H LE GHHV+IN
Sbjct: 111 YLDTINREILDFDFEKLCSVTLSNINVYACLVCGKYFQGRGPKSHAYFHGLEVGHHVFIN 170
Query: 167 LRTEKVYCLPDGYEINDPSLEDIRHV 192
+ T+KVY LP+GYE+ + SL+DI++V
Sbjct: 171 MGTKKVYVLPEGYEVKNKSLDDIKYV 196
>gi|407040896|gb|EKE40394.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 375
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 144/316 (45%), Gaps = 79/316 (25%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
R CPY++TV+R ++DFD EK C +L +Y C++CGK+YQGR S AY HSLE H
Sbjct: 15 RTYCPYVETVDRSLIDFDKEKVCCKTLKTNQLYCCMICGKFYQGRDVGSPAYVHSLEENH 74
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------- 190
H++++L T++ + LP G E+ + S +DI
Sbjct: 75 HIFLSLSTKQFFNLPHGNEVIETSFKDIINALDPVYTLNDISHLDDESKVIQLKDHFNKK 134
Query: 191 ----HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-----LVHRFGDLT 241
++G NN+ +TD +N +QS+ +RN L E S L+ R L
Sbjct: 135 YIIGYIGFNNLGKTDSINCLLQSIGHCKEIRNLLLNYEEVEKVSSKAKCGELIKRVSMLI 194
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RK W++ K +SP+E + + +K F I Q + +EF + +N L
Sbjct: 195 RKQWNSTIIKSVISPYELMSEFSRL-RKNFSIEKQEDVIEFYMFFINALLP--------- 244
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+ +CFQG++++ DG N T + LDLPP
Sbjct: 245 --LTQCFQGQIQI------------------EEDGKKSIKNCTC---------IPLDLPP 275
Query: 362 PPLFKDVMEKNIIPQL 377
PL+ D M++ IIPQL
Sbjct: 276 MPLYPDQMKEKIIPQL 291
>gi|167388869|ref|XP_001738726.1| pre-mRNA-splicing factor SAD1 [Entamoeba dispar SAW760]
gi|165897895|gb|EDR24939.1| pre-mRNA-splicing factor SAD1, putative [Entamoeba dispar SAW760]
Length = 427
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 144/316 (45%), Gaps = 79/316 (25%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
R CPY++TV+R ++DFD EK C +L +Y C++CGKYYQGR S AY HSLE H
Sbjct: 15 RAYCPYVETVDRNLIDFDKEKVCCKTLKTNQIYCCMICGKYYQGRDVGSPAYVHSLEENH 74
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIRH------------------------------ 191
H++++L T++ + LP G E+ +PS +DI +
Sbjct: 75 HIFLSLNTKQFFNLPHGNEVIEPSFKDIINALDPVYTSNDISHLDDENKVIQLKDHFNKK 134
Query: 192 -----VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-----LVHRFGDLT 241
+G NN+ TD +N +QS+ +RN L E S L+ R L
Sbjct: 135 YIIGFIGFNNLGRTDSINCLVQSIGHCKEIRNLLLSYEEIEKISSKARCGELIKRVSMLI 194
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RK W+ K +SP+E + + + KK F I Q + +EF + +N L
Sbjct: 195 RKQWNPTLIKSVISPYELMSELNRL-KKSFSIEKQEDLIEFYMFFINALLP--------- 244
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+ + FQG++++ E+G H + + LDLPP
Sbjct: 245 --LTQSFQGQIQI----------------EEGKKKYIKH-----------CICIPLDLPP 275
Query: 362 PPLFKDVMEKNIIPQL 377
PL+ D M++ IIPQL
Sbjct: 276 MPLYPDQMKEKIIPQL 291
>gi|412988066|emb|CCO19462.1| U4/U6.U5 tri-snRNP-associated protein 2 [Bathycoccus prasinos]
Length = 492
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 144/312 (46%), Gaps = 73/312 (23%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLE-AGHHVYI 165
YL VNR +LDFDFEK CSVS + N Y CL CG ++ GRG K+ AYTH+LE H V++
Sbjct: 92 YLSFVNRPLLDFDFEKRCSVSFAKENCYCCLTCGHFFAGRGPKTPAYTHALERENHFVFM 151
Query: 166 NLRTEKVYCLPDGYEINDPSLEDIRH---------------------------------V 192
+L + +CLPD YEI D SLED+R V
Sbjct: 152 HLENGRAFCLPDNYEIFDASLEDVRKVLFPRFTSEEIKRLEKEAIWSKALDGTEYLVGVV 211
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGD----LTRKIWHAR 248
GLN ++ VN +QSL RV LR FL R + D L ++IW+
Sbjct: 212 GLNRVENAKGVNSIVQSLARVEKLRAHFLSASLIRSDGNNNNKNENDTLQSLCQRIWNKH 271
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT---SIIY 305
NF+G SP F++ + K K ++++ + L N + LR+ +
Sbjct: 272 NFRGHTSPDSFVRKLRKQIKLAHPEKLETD----IDNLFNDPFATLRHFLTFVVPKKYVD 327
Query: 306 ECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLF 365
E F+GEL ++ N +N + PF+ + L LP PLF
Sbjct: 328 ELFRGELLML----------NQKNKTQ------------------PFVFVPLKLPDAPLF 359
Query: 366 KDVMEKNIIPQL 377
+DVMEKN IPQ+
Sbjct: 360 RDVMEKNAIPQV 371
>gi|4680681|gb|AAD27730.1|AF132955_1 CGI-21 protein [Homo sapiens]
Length = 324
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 119/195 (61%), Gaps = 15/195 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VGLNNIK D+ N +Q+L V PLRN+FL +NY++ K P LV RFG+L RK+
Sbjct: 64 VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKL 123
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS L KK +I
Sbjct: 124 WNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTI 183
Query: 304 IYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+ + FQG + + K++P + ++ + D++ E++ F+ L LDLP
Sbjct: 184 VTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST---FMYLTLDLPTA 237
Query: 363 PLFKDVMEKNIIPQL 377
PL+KD E+ IIPQ+
Sbjct: 238 PLYKDEKEQLIIPQV 252
>gi|67484272|ref|XP_657356.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
gi|56474587|gb|EAL51950.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
gi|449707548|gb|EMD47193.1| ubiquitin carboxylterminal hydrolase domain containing protein
[Entamoeba histolytica KU27]
Length = 444
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 144/316 (45%), Gaps = 79/316 (25%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGH 161
R CPY++TV+R ++DFD EK C +L +Y C++CGK+YQGR S AY HSLE H
Sbjct: 15 RTYCPYVETVDRSLIDFDKEKVCCKTLKTNQLYCCMICGKFYQGRDVGSPAYVHSLEENH 74
Query: 162 HVYINLRTEKVYCLPDGYEINDPSLEDIR------------------------------- 190
H++++L T++ + LP G E+ + S +DI
Sbjct: 75 HIFLSLSTKQFFNLPHGNEVIETSFKDIINALDPVYTLNDISHLDDENKVIQLKDHFNKK 134
Query: 191 ----HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-----LVHRFGDLT 241
++G NN+ TD +N +QS+ +RN L E + S L+ R L
Sbjct: 135 YIIGYIGFNNLGRTDSINCLLQSIGHCKEIRNLLLSYEEIENISSKARCGELIKRVSMLI 194
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
RK W++ K +SP+E + + + +K F I Q + +EF + +N L
Sbjct: 195 RKQWNSTIIKSVISPYELMSELSRL-RKNFSIEKQEDVIEFYMFFINALLP--------- 244
Query: 302 SIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPP 361
+ +CFQG++++ DG T + LDLPP
Sbjct: 245 --LTQCFQGQIQI------------------EEDGKKSIKKCTC---------IPLDLPP 275
Query: 362 PPLFKDVMEKNIIPQL 377
PL+ D M++ IIPQL
Sbjct: 276 MPLYPDQMKEKIIPQL 291
>gi|195174704|ref|XP_002028112.1| GL21349 [Drosophila persimilis]
gi|194115852|gb|EDW37895.1| GL21349 [Drosophila persimilis]
Length = 170
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 82/107 (76%), Gaps = 7/107 (6%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R CPYLDT+NR +LDFDFEK CSVSL+ +NVYACLVCGKY+QGRG +HAYTHS+ HH
Sbjct: 36 RVCPYLDTINRNLLDFDFEKLCSVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHH 95
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHVGLN------NIKETDFV 203
V++NL T + YCLPD YEI D SL+DI++V LN I + DFV
Sbjct: 96 VFLNLHTLRFYCLPDNYEIIDSSLDDIKYV-LNPTFTKQEISKLDFV 141
>gi|374109923|gb|AEY98828.1| FAGR007Cp [Ashbya gossypii FDAG1]
Length = 498
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 46/347 (13%)
Query: 67 QNGRTGEDDDEDKDEDEDDLANGYGQGQRSRL-VEVRRDCPYLDTVNRQVLDFDFEKFCS 125
+ R GE ++ +E D + Y + RL + + L T+ ++ LDF EK CS
Sbjct: 24 ETARVGERMPGKREVEESDSEDLYREEGNKRLHISSSDERGLLQTIEKKRLDFYSEKVCS 83
Query: 126 VSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-NDP 184
V+LS ++VY+CL CGKY QGR + S A+ HS+E H +++++RT K Y LP+ N
Sbjct: 84 VTLSTIDVYSCLTCGKYLQGRNEGSPAFKHSIEDLHRLFMHMRTFKTYILPENRPFRNAE 143
Query: 185 SLEDIRH------------------------------VGLNNIKETDFVNVTIQSLMRVT 214
L+ IR+ VGL+NI NV + L +
Sbjct: 144 VLDQIRYGFKPTYGRLQVADFPQDCEDLNGQPYLNGFVGLHNISNNGSSNVILLMLAHIK 203
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
P+R+ FL+ ++ P +++ L R IW F+ VSPHEFLQ V + +
Sbjct: 204 PVRDLFLLNDDLLERADPFINKLALLIRHIWSPNLFRRHVSPHEFLQYVATHLAQPSSMK 263
Query: 275 VQSNPVEFMSWLLN-TLHSDLRNTKKNTSIIYECFQGELEV--VKEIPKNTISGNDQNTE 331
S+P FM +++N L S +K + + QG + + K +P + ND
Sbjct: 264 AYSDPRNFMLFVINRMLKSSCGEVRKTLT---DNIQGTVTIRTTKIVP----APNDD--- 313
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQLQ 378
GS D T +++ + F ML LDLPP PLFKD N +PQ++
Sbjct: 314 -GSAIKFVLDTRTAKSTDVMFWMLSLDLPPRPLFKDGKSANSLPQVK 359
>gi|156843267|ref|XP_001644702.1| hypothetical protein Kpol_1056p45 [Vanderwaltozyma polyspora DSM
70294]
gi|156115350|gb|EDO16844.1| hypothetical protein Kpol_1056p45 [Vanderwaltozyma polyspora DSM
70294]
Length = 451
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 151/305 (49%), Gaps = 60/305 (19%)
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
L+TVN++ LDFD EK CSV+ S+LNVY CL+CGKY QGR + S A+ HS+ H V+INL
Sbjct: 33 LNTVNKKRLDFDIEKICSVTSSSLNVYCCLICGKYLQGRREHSPAFLHSVNENHFVFINL 92
Query: 168 RTEKVYCLPDGYEINDPS----LEDIR------------------------------HVG 193
T KVY LP EI D + DIR +VG
Sbjct: 93 DTLKVYNLPTDIEIKDQGKIQLINDIRYAIYPRFDKSEIIHFPQRCFDLNNKLYINGYVG 152
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
++N++ FV +Q L + P+R++FL+ E + + + RK+W + FK
Sbjct: 153 ISNVQSNGFVQSILQLLAHIEPIRDWFLLNE--IDSEESFMKNIKLIIRKLWSTKLFKSH 210
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE 313
+S EF + + + F +Q + +LL ++S ++++++ I+ E G++
Sbjct: 211 ISADEFFAFL--SIHENFEKMIQDPKI----FLLKIINSIIKSSQELGLILKEQLLGKV- 263
Query: 314 VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNI 373
I + ISG + N+ K + PF +L LDLP +F++ +E N
Sbjct: 264 ---SISTSAISGKEANSNK--------------VVKSPFWLLTLDLPTQTVFRNALEVND 306
Query: 374 IPQLQ 378
+PQ++
Sbjct: 307 LPQVK 311
>gi|302309338|ref|NP_986672.2| AGR007Cp [Ashbya gossypii ATCC 10895]
gi|299788311|gb|AAS54496.2| AGR007Cp [Ashbya gossypii ATCC 10895]
Length = 498
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 166/347 (47%), Gaps = 46/347 (13%)
Query: 67 QNGRTGEDDDEDKDEDEDDLANGYGQGQRSRL-VEVRRDCPYLDTVNRQVLDFDFEKFCS 125
+ R GE ++ +E D + Y + RL + + L T+ ++ LDF EK CS
Sbjct: 24 ETTRVGERMPGKREVEESDSEDLYREEGNKRLHISSSDERGLLQTIEKKRLDFYSEKVCS 83
Query: 126 VSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-NDP 184
V+LS ++VY+CL CGKY QGR + S A+ HS+E H +++++RT K Y LP+ N
Sbjct: 84 VTLSTIDVYSCLTCGKYLQGRNEGSPAFKHSIEDLHRLFMHMRTFKTYILPENRPFRNAE 143
Query: 185 SLEDIRH------------------------------VGLNNIKETDFVNVTIQSLMRVT 214
L+ IR+ VGL+NI NV + L +
Sbjct: 144 VLDQIRYGFKPTYGRLQVADFPQDCEDLNGQPYLNGFVGLHNISNNGSSNVILLMLAHIK 203
Query: 215 PLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
P+R+ FL+ ++ P +++ L R IW F+ VSPHEFLQ V + +
Sbjct: 204 PVRDLFLLNDDLLERADPFINKLALLIRHIWSPNLFRRHVSPHEFLQYVATHLAQPSSMK 263
Query: 275 VQSNPVEFMSWLLN-TLHSDLRNTKKNTSIIYECFQGELEV--VKEIPKNTISGNDQNTE 331
S+P FM +++N L S +K + + QG + + K +P + +D
Sbjct: 264 AYSDPRNFMLFVINRMLKSSCGEVRKTLT---DNIQGTVTIRTTKIVP---VPNDD---- 313
Query: 332 KGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQLQ 378
GS D T +++ + F ML LDLPP PLFKD N +PQ++
Sbjct: 314 -GSAIKFVLDTRTAKSTDVMFWMLSLDLPPRPLFKDGKSANSLPQVK 359
>gi|359497851|ref|XP_002272213.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Vitis vinifera]
Length = 172
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/119 (71%), Positives = 95/119 (79%), Gaps = 8/119 (6%)
Query: 264 MKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTI 323
MKASKKRFRIG QS+PVEFMSWLLNTLH DLR +KKN+SIIY CFQGELEVVKEIP
Sbjct: 1 MKASKKRFRIGAQSDPVEFMSWLLNTLHGDLRTSKKNSSIIYNCFQGELEVVKEIPNKGF 60
Query: 324 -----SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+G+DQN + D+H ++ ET RMPFLMLGLDLPPPPLFKDVMEKNIIPQ+
Sbjct: 61 FEKRENGDDQN---KATTADEHADVILETCRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 116
>gi|444317463|ref|XP_004179388.1| hypothetical protein TBLA_0C00530 [Tetrapisispora blattae CBS 6284]
gi|387512429|emb|CCH59869.1| hypothetical protein TBLA_0C00530 [Tetrapisispora blattae CBS 6284]
Length = 483
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 163/328 (49%), Gaps = 48/328 (14%)
Query: 93 GQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHA 152
+R + ++ + + LDT+N ++LDFDF+K C +S S++NVY CL CGKY QGR + + A
Sbjct: 17 NERFKRLKSQPNLSMLDTINIKLLDFDFDKVCCISSSSINVYCCLTCGKYLQGRLENTPA 76
Query: 153 YTHSLEAGHHVYINLRTEKVYCLPDGYEIND----PSLEDIRH----------------- 191
+ HSL H ++IN +T K+Y LPD +D + +IRH
Sbjct: 77 FIHSLNFNHRLFINFQTLKIYILPDNTLFHDEGTISVINEIRHLISPTFEEEEISTFPKR 136
Query: 192 -------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR--HCKSP-LVH 235
V LN+ +T ++ + + +TP+R++FL+ ++ KSP L +
Sbjct: 137 CLSLNKKEYLTGFVNLNSTSDTSYITTIVLAFAHITPIRDYFLLKKDDVGDILKSPNLEN 196
Query: 236 RFGDLTRKIWHARNFKGQVSPHEFLQA--VMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
+ G L RKIW + K +SP+E + + + S Q+ P++ + L TL
Sbjct: 197 KLGLLIRKIWSPQLAKPHISPNELIDYLNIHQKSNNESTPSQQTVPLKNPTTFLLTLIHQ 256
Query: 294 LRNTKKNT-SIIYECFQGELEV--VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L T N +I++E QG++++ + KN I DQ + S N T
Sbjct: 257 LSKTSNNLKTILFENLQGKIDIKSSSTVTKNII---DQPVDDESKKKIKAKNKIVHT--- 310
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQLQ 378
PF +L L+LP P+ K ++ + IP+++
Sbjct: 311 PFWLLKLELPSMPILKKGLKADDIPRVK 338
>gi|164661019|ref|XP_001731632.1| hypothetical protein MGL_0900 [Malassezia globosa CBS 7966]
gi|159105533|gb|EDP44418.1| hypothetical protein MGL_0900 [Malassezia globosa CBS 7966]
Length = 376
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 109/204 (53%), Gaps = 29/204 (14%)
Query: 203 VNVTIQSLMRVTPLRNFFLIPENYRHCKSP---------LVHRFGDLTRKIWHARNFKGQ 253
+NV IQ+L V PLRN+FL N S LV RF L R++W+ R FK Q
Sbjct: 1 MNVVIQALAHVPPLRNYFLQSGNGDASASASDTLPQSTELVRRFATLIRRLWNPRAFKSQ 60
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL----RNTKKNTSIIYECFQ 309
VSPHEFLQ V +AS+ RFR+ +PVEF+ WLLN LH DL +K SII ECF+
Sbjct: 61 VSPHEFLQEVTEASQGRFRLTEPCDPVEFLGWLLNRLHMDLVGSGSKARKQPSIITECFR 120
Query: 310 G--ELEVVKEIPKNTISGNDQNTEK-----GSDGGDDHDNI---------TTETSRMPFL 353
G LE K I + + +D G G D + ++PFL
Sbjct: 121 GALRLESQKVIVRTGLEDDDDLVVDKLDHDGRRAGGQQDEFGHAKFNIDKAIKVDQVPFL 180
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQL 377
+L +DLPP P+F+DV+ NIIPQ+
Sbjct: 181 LLAIDLPPLPVFQDVVADNIIPQV 204
>gi|66357988|ref|XP_626172.1| SnRNP assembly defective 1 like ubiquitin C-terminal hydrolase with
a UBP finger at the N-terminus [Cryptosporidium parvum
Iowa II]
gi|46227011|gb|EAK87961.1| SnRNP assembly defective 1 like ubiquitin C-terminal hydrolase with
a UBP finger at the N-terminus [Cryptosporidium parvum
Iowa II]
Length = 498
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 146/333 (43%), Gaps = 82/333 (24%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL ++ R VLDFD+EK CSV+L ++Y CLVCG YQG+G+ S AY HSLE HH++
Sbjct: 12 CPYLSSIKRSVLDFDYEKICSVTLREEHIYCCLVCGINYQGKGKGSMAYKHSLELKHHLF 71
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIR-------------------------------HVG 193
INL + CLP+ YEI + SLEDI+ +G
Sbjct: 72 INLTNSSIICLPNDYEIYEHSLEDIKGYLQPRFNSEIISSSLYDVSRTFDGIEFSPGFIG 131
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-----RHCKSPLVHRFGDLTRKIWHAR 248
L+N D +N I L R+T R+ L + Y + PL+ + +KI++
Sbjct: 132 LSNFGNNDSLNSIILILSRITEFRDLCLSYQLYSKEIEKRIPDPLLFSIIESIQKIYNPN 191
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIG------------VQSN----------PVEFMSWL 286
N KG+ SP+ ++ + K S +F +QSN P+ SW+
Sbjct: 192 NLKGKFSPYNLVKIIEKKSNGKFSFSKISNISTSSNSFIQSNVGTQNSTIIDPMALFSWI 251
Query: 287 LNTLHSDL----------------RNT-KKNTSIIYECFQGELEVVKEIPKNTISGNDQN 329
L + +NT K N +I C +GEL K + N++
Sbjct: 252 TYNLKKKIDKYLRKFQIKFIPDIDKNTNKSNMNIFDVCIKGELY-----NKASKYPNNKK 306
Query: 330 TEKGSDGGDDHDNIT--TETSRMPFLMLGLDLP 360
+E +D + T+ + F L L LP
Sbjct: 307 SESSTDNLMKSKKCSELKSTASICFNCLSLTLP 339
>gi|67609257|ref|XP_666934.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658011|gb|EAL36705.1| hypothetical protein Chro.50143 [Cryptosporidium hominis]
Length = 425
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 75/283 (26%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVY 164
CPYL ++ R VLDFD+EK CSV+L ++Y CLVCG YQG+G+ S AY HSLE HH++
Sbjct: 12 CPYLSSIKRSVLDFDYEKICSVTLREEHIYCCLVCGINYQGKGKGSMAYKHSLELKHHLF 71
Query: 165 INLRTEKVYCLPDGYEINDPSLEDIR-------------------------------HVG 193
INL + CLP+ YEI + SLEDI+ +G
Sbjct: 72 INLTNSSIICLPNDYEIYEHSLEDIKGYLQPRFNSEIISSSLYDVSRTFDGIEFFPGFIG 131
Query: 194 LNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-----RHCKSPLVHRFGDLTRKIWHAR 248
L+N D +N I L R+T R+ L + Y + PL+ + +KI++
Sbjct: 132 LSNFGNNDSLNSIILILSRITEFRDLCLSYQLYSKEIEKRIPDPLLFSIIESIQKIYNPN 191
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIG------------VQSN----------PVEFMSWL 286
N KG+ SP+ ++ + K S +F +QSN P+ SW+
Sbjct: 192 NLKGKFSPYNLVKIIEKKSNGKFSFSKISNISTSSNSFIQSNVGTQNSTIIDPMALFSWI 251
Query: 287 LNTLHSDL----------------RNT-KKNTSIIYECFQGEL 312
L + +NT K N +II C +G+L
Sbjct: 252 TYNLKKKIDKYLRKFQIKFIPDIDKNTNKSNMNIIDVCIKGKL 294
>gi|443719395|gb|ELU09579.1| hypothetical protein CAPTEDRAFT_165273 [Capitella teleta]
Length = 358
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 15/195 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDLTRKI 244
VG+NNIK D+ NV +Q+L V PLRN+FL ENY K P L RFG+L RK+
Sbjct: 15 VGMNNIKANDYCNVILQALSHVAPLRNYFLQEENYNTIKRPPGDQMFLLARRFGELLRKL 74
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK-NTSI 303
W+ RNFK VSPHE LQAV+ SKK F+I Q + VEF+SW LN+LH L KK N+SI
Sbjct: 75 WNPRNFKAHVSPHEMLQAVVLCSKKHFQITKQGDSVEFLSWFLNSLHQCLGGNKKVNSSI 134
Query: 304 IYECFQGELEVV-KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPP 362
+ + F+G + V ++IP + +++ + +++ ET PFL L DLPPP
Sbjct: 135 VSKTFRGSMRVYSRKIPALELREDEKLKLLET---EEYQETCAET---PFLYLTCDLPPP 188
Query: 363 PLFKDVMEKNIIPQL 377
PL+ D +++NIIPQ+
Sbjct: 189 PLYPDGLQENIIPQI 203
>gi|50293525|ref|XP_449174.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528487|emb|CAG62144.1| unnamed protein product [Candida glabrata]
Length = 427
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 69/320 (21%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
R P+L TVN++ L+FD EK CSVSLS+LNVY CLVCGKY QGR S A++HS+ HH
Sbjct: 8 RAIPFLSTVNQKALNFDLEKVCSVSLSHLNVYCCLVCGKYLQGREPNSPAFSHSVNENHH 67
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKET---------------------- 200
+++ +T++ Y LP+G I ++ +NI T
Sbjct: 68 IFVRFQTQRFYILPEGKIIKPVDYNEVLKTIRDNISPTYEPEAVRLFPVNCTDVSSHTYY 127
Query: 201 ------------DFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHAR 248
DF NV I L + P+R+ FL+ + PLV FG + RK W
Sbjct: 128 NGFIPLYDSSHRDFANVVIVMLSHIPPIRDTFLVGMDTDKF-DPLVKLFGLILRKHWSKN 186
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECF 308
+ V E L + K +P F+ LLN L S K++ ++C
Sbjct: 187 LLRAHVLTDELLSYISINYPKLLE---NKDPRVFLLSLLNALISKCPQLKQS----FDCI 239
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD- 367
+G ++ S DD D T+ +PF L LDLP +FK
Sbjct: 240 KGRID--------------------SQDIDD-DGKITKRRLLPFTCLTLDLPGDSVFKSS 278
Query: 368 -----VMEKNIIPQLQRLSG 382
+++ NI +++ G
Sbjct: 279 SVDEAILQTNIEDLMKKYDG 298
>gi|371536781|gb|AEX33653.1| peptidase [Uromyces hobsonii]
Length = 97
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 63/64 (98%)
Query: 129 SNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLED 188
SNLNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINLR+EKV+CLPDGYE+ DPSL+D
Sbjct: 6 SNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYINLRSEKVFCLPDGYEVIDPSLDD 65
Query: 189 IRHV 192
IR+V
Sbjct: 66 IRYV 69
>gi|401839190|gb|EJT42510.1| SAD1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 448
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 64/319 (20%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
D YL+TV R+ +DFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS+ HHV
Sbjct: 28 DYAYLETVVREKIDFDSEKICCITLSPLNVYCCLVCGHYYQGRHEKSPAFIHSINENHHV 87
Query: 164 YINLRTEKVYCLPDGYEI-NDPSLEDIR-------------------------------- 190
++NL K Y LP +I ND ++ +
Sbjct: 88 FLNLTNLKFYILPQNIQILNDNKIQLLNGIKYALYPTYCTKDLQSFPKQCFDLSNRAYLN 147
Query: 191 -HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
+G N D+ + + + + PLR+ FL+ N+ + + R +KIW +
Sbjct: 148 GFIGFTNSAAYDYAHTVLLLISHIAPLRDCFLL--NHFDNEGEFIKRLSICIKKIWSPKL 205
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FK +S ++F+ + R +P F+ WLLN + S ++K+ SI+ + +
Sbjct: 206 FKHHLSVNDFVTYLKVKEGLDLRF---IDPRFFLLWLLNKICS---SSKQLKSILNQSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD-- 367
G++++ K ++ E G I ++ + PF +L LDLP FKD
Sbjct: 260 GKVKITK--------IENETEENGP--------IISKVNVKPFWVLTLDLPEFSPFKDGN 303
Query: 368 ----VMEKNIIPQLQRLSG 382
+ + NII L + S
Sbjct: 304 TVENLPQVNIIQLLTKFSN 322
>gi|401625923|gb|EJS43903.1| sad1p [Saccharomyces arboricola H-6]
Length = 448
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 58/305 (19%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG++YQGR +KS A+ HS+ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGRFYQGRHEKSPAFIHSINENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI----NDPSLEDIRH------------------------------V 192
L T K Y LP +I L I++ +
Sbjct: 91 LTTLKFYILPQNIQILHDDKVQLLNGIKYALYPTYRVKDLQNFPRQCFDLSNRVYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + PLR+ FL+ N + + R +KIW + FK
Sbjct: 151 GFTNTAVYDYAHSVLLIISHMIPLRDHFLL--NDFDDQDEFIKRLSICIKKIWSPKLFKH 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGEL 312
+S +F+ + K+ + V NP + WLLN + S ++K+ SI+ + +G++
Sbjct: 209 YLSVDDFVTYL--KVKEGLSLSV-VNPRFLLLWLLNKICS---SSKQLKSILNQYCKGKV 262
Query: 313 EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKN 372
++ GN + TE GS +T++ + PF +L LDLP FKD +
Sbjct: 263 RII---------GNKRETE-GS------GTVTSKVNVKPFWVLTLDLPEFSPFKDGNTVD 306
Query: 373 IIPQL 377
+PQ+
Sbjct: 307 NLPQV 311
>gi|365760941|gb|EHN02623.1| Sad1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 147/319 (46%), Gaps = 64/319 (20%)
Query: 104 DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHV 163
D YL+TV R+ +DFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS+ HHV
Sbjct: 28 DYAYLETVVREKIDFDSEKICCITLSPLNVYCCLVCGHYYQGRHEKSPAFIHSINENHHV 87
Query: 164 YINLRTEKVYCLPDGYEI-NDPSLEDIR-------------------------------- 190
++NL K Y LP +I ND ++ +
Sbjct: 88 FLNLTNLKFYILPQNIQILNDNKIQLLNGIKYALYPTYCTKDLQSFPKQCFDLSNRAYLN 147
Query: 191 -HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARN 249
+G + D+ + + + + PLR+ FL+ N+ + + R +KIW +
Sbjct: 148 GFIGFTDSAAYDYAHTVLLLISHIAPLRDCFLL--NHFDNEGEFIKRLSTCIKKIWSPKL 205
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
FK +S ++F+ + R +P F+ WLLN + S ++K+ SI+ + +
Sbjct: 206 FKHHLSVNDFVTYLKVKEGLDLRF---IDPRFFLLWLLNKICS---SSKQLKSILNQSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD-- 367
G++++ K ++ E G I ++ + PF +L LDLP FKD
Sbjct: 260 GKVKITK--------IENETEENGP--------IISKVNVKPFWVLTLDLPEFSPFKDGN 303
Query: 368 ----VMEKNIIPQLQRLSG 382
+ + NII L + S
Sbjct: 304 TVENLPQVNIIQLLTKFSN 322
>gi|14318527|ref|NP_116660.1| Sad1p [Saccharomyces cerevisiae S288c]
gi|1175976|sp|P43589.1|SAD1_YEAST RecName: Full=Pre-mRNA-splicing factor SAD1; AltName: Full=snRNP
assembly-defective protein 1
gi|836760|dbj|BAA09244.1| unnamed protein product [Saccharomyces cerevisiae]
gi|51012983|gb|AAT92785.1| YFR005C [Saccharomyces cerevisiae]
gi|285811900|tpg|DAA12445.1| TPA: Sad1p [Saccharomyces cerevisiae S288c]
gi|349577920|dbj|GAA23087.1| K7_Sad1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 448
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 145/308 (47%), Gaps = 64/308 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGHYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI---------------NDPS-----LEDIR--------------HV 192
L + K Y LP +I P+ LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKH 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +F+ S + R G+ NP++ F+ WL N + S + K SI+ +
Sbjct: 209 HLSVDDFV------SYLKVREGLNLNPIDPRLFLLWLFNKICSSSNDLK---SILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K +N + S+ +T + PF +L LDLP F+D
Sbjct: 260 GKVKIAKV----------ENKPEASES------VTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQL 377
+ +PQ+
Sbjct: 304 SVDDLPQI 311
>gi|430813518|emb|CCJ29131.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 203
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 13/99 (13%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQ-------------GRGQKSHAY 153
YLDTV+R LDFDFEK CS+SLSNLNVYACL+CGKY+Q GRG+ S+AY
Sbjct: 88 YLDTVDRTRLDFDFEKLCSISLSNLNVYACLICGKYFQGLFLFFCSLLNELGRGRSSYAY 147
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHV 192
HSL+ HHVYINL + K+Y LP+ YE+ +L+DI++V
Sbjct: 148 FHSLDEAHHVYINLHSLKIYVLPESYEVRTNALDDIKYV 186
>gi|151940767|gb|EDN59154.1| conserved zinc-finger domain protein involved in pre-mRNA splicing
[Saccharomyces cerevisiae YJM789]
gi|392299676|gb|EIW10769.1| Sad1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 448
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 143/308 (46%), Gaps = 64/308 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGHYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI---------------NDPS-----LEDIR--------------HV 192
L + K Y LP +I P+ LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKH 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +F+ S + R G+ NP++ F+ WL N + S K SI+ +
Sbjct: 209 HLSVDDFV------SYLKVREGLNLNPIDPRLFLLWLFNKICSSSNELK---SILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 260 GKVKIAKVESKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQL 377
+ +PQ+
Sbjct: 304 SVDDLPQI 311
>gi|365765846|gb|EHN07351.1| Sad1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 142/308 (46%), Gaps = 64/308 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGNYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI---------------NDPS-----LEDIR--------------HV 192
L + K Y LP +I P+ LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKX 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +FL S + R G+ NP++ F+ WL N + K SI+ +
Sbjct: 209 HLSVDDFL------SYLKVREGLNLNPIDPRLFLLWLFNKICXSSNELK---SILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 260 GKVKIAKVESKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQL 377
+ +PQ+
Sbjct: 304 SVDDLPQI 311
>gi|190406577|gb|EDV09844.1| hypothetical protein SCRG_05551 [Saccharomyces cerevisiae RM11-1a]
gi|256268857|gb|EEU04209.1| Sad1p [Saccharomyces cerevisiae JAY291]
gi|259146195|emb|CAY79454.1| Sad1p [Saccharomyces cerevisiae EC1118]
gi|323337778|gb|EGA79021.1| Sad1p [Saccharomyces cerevisiae Vin13]
gi|323355182|gb|EGA87009.1| Sad1p [Saccharomyces cerevisiae VL3]
Length = 448
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 64/308 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGNYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI---------------NDPS-----LEDIR--------------HV 192
L + K Y LP +I P+ LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKH 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +FL S + R G+ NP++ F+ WL N + ++ + SI+ +
Sbjct: 209 HLSVDDFL------SYLKVREGLNLNPIDPRLFLLWLFNKI---CLSSNELKSILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 260 GKVKIAKVESKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQL 377
+ +PQ+
Sbjct: 304 SVDDLPQI 311
>gi|323309248|gb|EGA62469.1| Sad1p [Saccharomyces cerevisiae FostersO]
Length = 358
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 142/308 (46%), Gaps = 64/308 (20%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGNYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI---------------NDPS-----LEDIR--------------HV 192
L + K Y LP +I P+ LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKH 208
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECFQ 309
+S +FL S + R G+ NP++ F+ WL N + K SI+ +
Sbjct: 209 HLSVDDFL------SYLKVREGLNLNPIDPRLFLLWLFNKICXSSNXLK---SILNHSCK 259
Query: 310 GELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVM 369
G++++ K E + +++T + PF +L LDLP F+D
Sbjct: 260 GKVKIAK-------------VEXKPEAS---ESVTGKVIVKPFWVLTLDLPEFSPFEDGN 303
Query: 370 EKNIIPQL 377
+ +PQ+
Sbjct: 304 SVDDLPQI 311
>gi|297734726|emb|CBI16960.3| unnamed protein product [Vitis vinifera]
Length = 87
Score = 120 bits (301), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/86 (60%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Query: 211 MRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA-SKK 269
MRV PLRNFFLI ENY+HC SPL+HRF +LTR+ WH N + ++ + FL AV KA S
Sbjct: 1 MRVIPLRNFFLILENYKHCNSPLIHRFQELTRRYWHPWNCRIKLKSYTFLNAVTKATSNN 60
Query: 270 RFRIGVQSNPVEFMSWLLNTLHSDLR 295
R+++GV+S+P+EFM+WLLN+LH DLR
Sbjct: 61 RYQMGVESDPIEFMAWLLNSLHVDLR 86
>gi|308809297|ref|XP_003081958.1| putative U4/U6.U5 tri-snRNP-associated (ISS) [Ostreococcus tauri]
gi|116060425|emb|CAL55761.1| putative U4/U6.U5 tri-snRNP-associated (ISS) [Ostreococcus tauri]
Length = 308
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 104/197 (52%), Gaps = 41/197 (20%)
Query: 203 VNVTIQSLMRVTPLRNFFLIPE----NYR--HCKSPLVHRFGDLTRKIWHARNFKGQVSP 256
+N +Q+L RV PLR L+ E N R H ++ L +L +K+W+A+NFKG SP
Sbjct: 1 MNAVVQALARVGPLRRALLLREEDELNARRGHHQTSLFSALANLMKKMWNAKNFKGHSSP 60
Query: 257 HEFLQAVMKASKKRF-------RIGVQSNPVEFMSWLLNTL-HSDLRNTKKN-------T 301
HEFLQAV K SK+ F + + ++F+ W+LN L + ++ KN +
Sbjct: 61 HEFLQAVRKQSKEMFGGVKASKTAATRPDAMQFLRWMLNELIREEKKDIAKNASLSGDIS 120
Query: 302 SIIYECFQGELEVVKE-IPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLP 360
S++ CFQGE+E+V E P S + T K FLML +DLP
Sbjct: 121 SVVEACFQGEVEIVPEGDPDLAASSAPRKTSK-------------------FLMLSMDLP 161
Query: 361 PPPLFKDVMEKNIIPQL 377
PLF+DVMEK IIPQ+
Sbjct: 162 AAPLFQDVMEKKIIPQV 178
>gi|366990323|ref|XP_003674929.1| hypothetical protein NCAS_0B04730 [Naumovozyma castellii CBS 4309]
gi|342300793|emb|CCC68557.1| hypothetical protein NCAS_0B04730 [Naumovozyma castellii CBS 4309]
Length = 441
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 44/251 (17%)
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
+ T+N + L+FDF+K CSV+LS +VY CLVCGKY+QGR ++S A+ HS+++ HH++IN+
Sbjct: 45 VSTINLKKLNFDFKKVCSVTLSPTHVYCCLVCGKYFQGRNERSPAFVHSIDSKHHIFINM 104
Query: 168 RTEKVYCLPDGYEI---NDPSLEDIRHVGL-----NNIKE-------------------- 199
+ + + LP+ +I +D L+ IR+ + IKE
Sbjct: 105 NSLEYFELPENIQIEAVDDKILKVIRYAICPTYSNDAIKEFPLECIDTYGKVYANGFIGV 164
Query: 200 -------TDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
+ F+NV + + + P+RNFFL+ + ++ L+ + L RKIW +
Sbjct: 165 TDSSNNHSAFINVVLMLIGHINPIRNFFLLTD--LQGENLLLQKLSILMRKIWSPHLIRN 222
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGEL 312
+ EFL ++ + + + +P F+ WL+N L + K+ ++ C QG++
Sbjct: 223 YICTDEFLDFLVINKQLQ---KLPKDPKIFLLWLINNLAIKSKILKQ--QLMLHC-QGKI 276
Query: 313 EVVKEIPKNTI 323
V+K K TI
Sbjct: 277 -VIKMNNKKTI 286
>gi|365983318|ref|XP_003668492.1| hypothetical protein NDAI_0B02140 [Naumovozyma dairenensis CBS 421]
gi|343767259|emb|CCD23249.1| hypothetical protein NDAI_0B02140 [Naumovozyma dairenensis CBS 421]
Length = 438
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 131/293 (44%), Gaps = 68/293 (23%)
Query: 108 LDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINL 167
L TVN LDF EK CSV+LS LNVY CLVCGKY+QG +KS A+ HS+ H+++ NL
Sbjct: 34 LQTVNLHKLDFGLEKICSVTLSKLNVYCCLVCGKYFQGHNEKSPAFLHSINNNHNLFFNL 93
Query: 168 RTEKVYCLPDGYEI---NDPSLEDIR------------------------------HVGL 194
T LPD I ++P LE I+ V +
Sbjct: 94 YTSDFIKLPDAILIEGDHEPLLESIKAAFFPKYSHEEIVAFPKKCKDLNKRLYVNGFVRV 153
Query: 195 NNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQV 254
N D +NV + L VTPLR++ L+ + +S V ++ RKIW FK V
Sbjct: 154 TNSSSLDHLNVILLLLSHVTPLRDWLLLSD--VSAESTFVQGLSNIVRKIWSPYLFKNHV 211
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEV 314
S EF + + + ++++P + + W+LN + D + K+ I++E QG++
Sbjct: 212 SADEFADFL---TVQNLINKLRNDPADLLIWMLNFMAFDSKALKR---ILHESCQGKINF 265
Query: 315 VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKD 367
NT K S +PF L LDLP + K+
Sbjct: 266 --------------NTRKTSQI-------------LPFWKLSLDLPVNSILKE 291
>gi|238578223|ref|XP_002388644.1| hypothetical protein MPER_12308 [Moniliophthora perniciosa FA553]
gi|215450114|gb|EEB89574.1| hypothetical protein MPER_12308 [Moniliophthora perniciosa FA553]
Length = 169
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 4/84 (4%)
Query: 90 YGQGQRSRLVE-VRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQ 148
YG+G +VE V+ YLDT+NR VLDFDFEK CSVSLSN+N Y CLVCGKY+QGRG+
Sbjct: 41 YGEGD---VVEPVKASDLYLDTINRAVLDFDFEKVCSVSLSNINTYGCLVCGKYFQGRGR 97
Query: 149 KSHAYTHSLEAGHHVYINLRTEKV 172
KS+AY HS+ HHV+INL T K
Sbjct: 98 KSYAYAHSIHEDHHVFINLETTKA 121
>gi|367007818|ref|XP_003688638.1| hypothetical protein TPHA_0P00460 [Tetrapisispora phaffii CBS 4417]
gi|357526948|emb|CCE66204.1| hypothetical protein TPHA_0P00460 [Tetrapisispora phaffii CBS 4417]
Length = 482
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 64/314 (20%)
Query: 106 PYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYI 165
P L ++N++ LDFD E+ CS++ +N+NVY CLVCGKY++GR + S A+ HS+ H+++I
Sbjct: 45 PLLRSINKKKLDFDAERICSITATNVNVYCCLVCGKYFKGRNEGSPAFLHSIGENHNIFI 104
Query: 166 NLRTEKVYCLPDGYEINDPS---------LEDIRHV-----GLNNIKE------------ 199
N+ K++ LP + D ++DI++ L +IK+
Sbjct: 105 NMTNLKLFNLPANIPLEDAVTLNLTEQKIIDDIKYAINPQFTLESIKDFPIICKDVDNEE 164
Query: 200 ---------------TDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKI 244
D + + L + +R++FL+ +N + +P + L ++I
Sbjct: 165 YLNGFVGISYNANASNDSIASIVMMLTHMDDIRDYFLLDKNLTN-DTPFETKLRLLMKRI 223
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + FK V+ +E L ++ R ++ + + +
Sbjct: 224 WSPKLFKSHVAMNELLSFILIDPSFSNR--------------------NINDPRLLLLSL 263
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ +K+I I G T + S I + + MPF +L LDLP P+
Sbjct: 264 INSNINISKPLKDIIDTNIRGQVLVTSEKSVANSKESKI--KKTIMPFSLLSLDLPDVPV 321
Query: 365 FKDVMEKNIIPQLQ 378
FKD M+ N +PQ++
Sbjct: 322 FKDGMDTNALPQIK 335
>gi|410076064|ref|XP_003955614.1| hypothetical protein KAFR_0B01800 [Kazachstania africana CBS 2517]
gi|372462197|emb|CCF56479.1| hypothetical protein KAFR_0B01800 [Kazachstania africana CBS 2517]
Length = 436
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 150/350 (42%), Gaps = 95/350 (27%)
Query: 79 KDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLV 138
K EDD +G Q + R +E D Y+D +N + LDFD K CSV+LS +NVY CL
Sbjct: 3 KTSREDD--DGSVQDLKKRKIE--SDHEYIDQINVKKLDFDQNKVCSVTLSPINVYCCLQ 58
Query: 139 CGKYYQGRGQKSHAYTHSL-EAGHHVYINLRTEKVYCLPDGYEI----NDPSLEDIR--- 190
CGK++QGRG +S A+ HS+ E+ H + INL T +Y LPD EI DP + IR
Sbjct: 59 CGKFFQGRGIQSPAFQHSIDESSHKLLINLNTTSIYILPDNKEILKDSTDPLVRKIRFAI 118
Query: 191 -----------------------HVGLNNIKETDFVNVTIQS-------------LM--R 212
+G+NN +DFVN I + LM
Sbjct: 119 NPQYTREDIVQLSQRVSNHYVCGFIGINN-NNSDFVNSRIATGKSIEIDHINSALLMFSH 177
Query: 213 VTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNF-KGQVSPHEFLQAVMKASKKRF 271
+ P+R+ L+ ++ + L + + +KIW K +S E + +M F
Sbjct: 178 IFPVRDHLLLLDHKDTKINELSRKISLIVKKIWSPNLISKYHISTIEVITYLMIHEPHLF 237
Query: 272 RIGVQSNPVEFMSWLLNTLHSDLRNTKKNT---SIIYECFQGELEVVKEIPKNTISGNDQ 328
+ NP ++WLLN L TKK+ S++ + QG +E+
Sbjct: 238 K---NHNPKLMLTWLLNYL------TKKDKDIGSVLKKNLQGTIEM-------------- 274
Query: 329 NTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQLQ 378
+ + F L + LPP +FKD N PQ++
Sbjct: 275 -----------------RSKHINFWHLTVSLPPITVFKDGNNVNKFPQVK 307
>gi|410035308|ref|XP_003949874.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
gi|11493496|gb|AAG35521.1|AF130117_55 PRO2855 [Homo sapiens]
gi|90085477|dbj|BAE91479.1| unnamed protein product [Macaca fascicularis]
gi|119619897|gb|EAW99491.1| ubiquitin specific peptidase 39, isoform CRA_b [Homo sapiens]
gi|193786396|dbj|BAG51679.1| unnamed protein product [Homo sapiens]
gi|343958404|dbj|BAK63057.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pan troglodytes]
Length = 296
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 8/147 (5%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV RFG+L RK+W+ RNFK VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS
Sbjct: 4 LVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHS 63
Query: 293 DL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L KK +I+ + FQG + + K++P + ++ + D++ E++
Sbjct: 64 ALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST-- 118
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQL 377
F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 119 -FMYLTLDLPTAPLYKDEKEQLIIPQV 144
>gi|440803653|gb|ELR24536.1| ubiquitin specific protease 39 and snrnp assembly factor, putative,
partial [Acanthamoeba castellanii str. Neff]
Length = 262
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 73/134 (54%), Gaps = 30/134 (22%)
Query: 61 SGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDF 120
+GA+ + R DDE + A G V R CPYLDTVNR +LDFDF
Sbjct: 32 AGAEGSHSKRPKHVDDEQDESRRGAHATG----------AVVRRCPYLDTVNRALLDFDF 81
Query: 121 EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE 180
EK C RG+ SHAY HSL+A HHV+INL EKVYCLPDGYE
Sbjct: 82 EKVCR--------------------RGRGSHAYYHSLQADHHVFINLLNEKVYCLPDGYE 121
Query: 181 INDPSLEDIRHVGL 194
+ DPSL+DI+ + L
Sbjct: 122 VQDPSLDDIKVIAL 135
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS 231
VGLNNIK D++N + SL V PLR+FFL+ ENYR ++
Sbjct: 197 VGLNNIKNNDYINAVVHSLAHVRPLRDFFLLEENYRDVRT 236
>gi|193785997|dbj|BAG50973.1| unnamed protein product [Homo sapiens]
Length = 296
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 8/147 (5%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV RFG+L RK+W+ RNF+ VSPHE LQAV+ SKK F+I Q + V+F+SW LN LHS
Sbjct: 4 LVQRFGELMRKLWNPRNFRAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHS 63
Query: 293 DL-RNTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
L KK +I+ + FQG + + K++P + ++ + D++ E++
Sbjct: 64 ALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEK---EQLLHNDEYQETMVEST-- 118
Query: 351 PFLMLGLDLPPPPLFKDVMEKNIIPQL 377
F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 119 -FMYLTLDLPTAPLYKDEKEQLIIPQV 144
>gi|449269014|gb|EMC79824.1| U4/U6.U5 tri-snRNP-associated protein 2 [Columba livia]
Length = 395
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 111/243 (45%), Gaps = 55/243 (22%)
Query: 146 RGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNV 205
RG KSHAY HS++ HHV++NL T K YCLPD YEI D SLEDI + L + + F
Sbjct: 21 RGLKSHAYIHSVQLSHHVFLNLHTLKFYCLPDNYEIIDSSLEDIT-ISLQYVLKPTFTAQ 79
Query: 206 TIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMK 265
I +L R R P HR A
Sbjct: 80 QIANLDR------------QVRWHHVPAGHR------------------------GAQQH 103
Query: 266 ASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-KNTSIIYECFQGELEV-VKEIPKNTI 323
S++ + + VEF+SW LN LHS L TK K +I+ + FQG + + K++P +
Sbjct: 104 QSQRLRQRRAAGDGVEFLSWFLNALHSALGGTKRKKKTIVTDVFQGSMRIFTKKLPHPDL 163
Query: 324 SGND-----QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQLQ 378
+ QN E + + E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 164 PAEEKAQLLQNAE--------YQEMMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQVP 212
Query: 379 RLS 381
S
Sbjct: 213 LFS 215
>gi|323348778|gb|EGA83018.1| Sad1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 219
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 36/191 (18%)
Query: 107 YLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYIN 166
YL+TV R+ LDFD EK C ++LS LNVY CLVCG YYQGR +KS A+ HS++ HHV++N
Sbjct: 31 YLETVVREKLDFDSEKICCITLSPLNVYCCLVCGNYYQGRHEKSPAFIHSIDENHHVFLN 90
Query: 167 LRTEKVYCLPDGYEI---------------NDPS-----LEDIR--------------HV 192
L + K Y LP +I P+ LED +
Sbjct: 91 LTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCPKDLEDFPRQCFDLSNRTYLNGFI 150
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 151 GFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFKX 208
Query: 253 QVSPHEFLQAV 263
+S F +
Sbjct: 209 HLSVDXFFILI 219
>gi|195174706|ref|XP_002028113.1| GL21350 [Drosophila persimilis]
gi|194115853|gb|EDW37896.1| GL21350 [Drosophila persimilis]
Length = 300
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQA-VMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
LV RFG+L RK A+ + VSPHE + S KRF+I Q +P++F+SW LNTLH
Sbjct: 12 LVQRFGELMRKCASAQLQRLNVSPHETAAGRWVLWSSKRFQITEQGDPIDFLSWFLNTLH 71
Query: 292 SDLR-NTKKNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
L+ N + N+SI+Y F GE+++ +++P + +D EK + D +
Sbjct: 72 RALKGNKQPNSSILYNIFLGEMQIFTRKMP--PVELDDAAKEKLLATEEYQDQV----EH 125
Query: 350 MPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
F+ L DLPPPPLF D +NIIPQ+
Sbjct: 126 TNFIYLTCDLPPPPLFTDEFRENIIPQV 153
>gi|221101271|ref|XP_002154126.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Hydra magnipapillata]
Length = 76
Score = 87.8 bits (216), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/46 (80%), Positives = 41/46 (89%)
Query: 99 VEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQ 144
V+ R CPYLDT+NR VLDFDFEK CSVSLS+LNVYACLVCGKY+Q
Sbjct: 31 VDKSRHCPYLDTINRSVLDFDFEKLCSVSLSHLNVYACLVCGKYFQ 76
>gi|403215501|emb|CCK70000.1| hypothetical protein KNAG_0D02510 [Kazachstania naganishii CBS
8797]
Length = 419
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 127/305 (41%), Gaps = 89/305 (29%)
Query: 116 LDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSL-EAGHHVYINLRTEKVYC 174
LDFD K CSV + L VY CL CGK+ QGRG +S + H++ + H +++NLR KVY
Sbjct: 34 LDFDQVKRCSVKCTPLEVYCCLQCGKFLQGRGARSPCFLHAVNNSRHSMFMNLRDAKVYE 93
Query: 175 LPDGYEINDP--------------SLEDIR--------------------HVGLNNIKET 200
LP E++ E R VG+ +
Sbjct: 94 LPLNREVDTARDTLLQRLQLALQPQFESDRLQAFPQNCTDLVAGKQYTNGFVGITG--KP 151
Query: 201 DFVNVTIQSLMRVTPLRNFFLIPENYRHCKS---PLVHRFGDLTRKIWHARNFKGQVSPH 257
VN + L +TP+R+ L+ CK LV + +++W +G VSP
Sbjct: 152 QLVNYIVILLAHITPVRDNLLL------CKQQEGTLVGQVTQFVQRLWSTTLLRGHVSPE 205
Query: 258 EFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-HSDLRNTKKNTSIIYECFQGELEVVK 316
E++ + S+ + ++P +WL+N L S L++T + +GE+EV
Sbjct: 206 EWVSYLQVHSRDWLDV---TDPKLAFNWLINQLIKSPLQDT------LASACRGEIEV-- 254
Query: 317 EIPKNTISGNDQNTEKGSDGGDDHDNITTETSR-MPFLMLGLDLP--PPPLFKDVMEKNI 373
+TSR +PF + LDLP +FKD E N
Sbjct: 255 ----------------------------KQTSRVVPFWNVTLDLPTSSATIFKDGREVND 286
Query: 374 IPQLQ 378
+PQ+Q
Sbjct: 287 LPQIQ 291
>gi|170573077|ref|XP_001892342.1| ubiquitin thiolesterase homolog [Brugia malayi]
gi|158602339|gb|EDP38837.1| ubiquitin thiolesterase homolog, putative [Brugia malayi]
Length = 282
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 103 RDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQ 144
R CPYLDT++R LDFDFEK CSVSLS++NVYAC+VCGKY+Q
Sbjct: 222 RQCPYLDTIDRCALDFDFEKLCSVSLSHINVYACMVCGKYFQ 263
>gi|320169093|gb|EFW45992.1| hypothetical protein CAOG_08358 [Capsaspora owczarzaki ATCC 30864]
Length = 142
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 105 CPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGR 146
CPYLDTV+R LDFDFEK CSVSLS+ N+YACL+CGKY+QG+
Sbjct: 97 CPYLDTVDRSQLDFDFEKVCSVSLSDFNIYACLICGKYFQGK 138
>gi|154415994|ref|XP_001581020.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121915244|gb|EAY20034.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 425
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 40/219 (18%)
Query: 111 VNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
++R V+ FD + C S+ N++ CL CG+ + G S H A H + +NL+T
Sbjct: 18 IDRTVIRFDQDMICCQSMVRENLFMCLECGQIFAGGTVGSPLLLHYGRAAHTIALNLKTN 77
Query: 171 KVYCLPDGYEIND------------PSLED-IRHVGLNNIKETDFVN------------- 204
KV LP+ E++D P+ D + ++ L KE +N
Sbjct: 78 KVVMLPNYQELSDYKEISDIQFASRPTYTDKVINLILQKQKEGIKINNKLFYPGQLLFDL 137
Query: 205 --------VTIQSLMRVTPLRNFFLI-PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVS 255
I+ + R+TPLR+F L+ P++ +PL + ++ ++ F+ +S
Sbjct: 138 RSKQSSQLSVIRFISRITPLRDFLLLNPQS-----TPLANELSRYFKQAFNPYGFRDHIS 192
Query: 256 PHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
P L+++ S ++ + + NPVE+ +++L L+ ++
Sbjct: 193 PFTLLRSIQTLSNDKYNVQNEVNPVEYFTFILQLLNQEI 231
>gi|15235644|ref|NP_193973.1| Ubiquitin-specific protease family C19-related protein [Arabidopsis
thaliana]
gi|75209745|sp|Q9SUX7.1|FB245_ARATH RecName: Full=Putative F-box protein At4g22420
gi|5738373|emb|CAB52816.1| putative protein [Arabidopsis thaliana]
gi|7269088|emb|CAB79197.1| putative protein [Arabidopsis thaliana]
gi|332659206|gb|AEE84606.1| Ubiquitin-specific protease family C19-related protein [Arabidopsis
thaliana]
Length = 184
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 71/118 (60%), Gaps = 7/118 (5%)
Query: 21 KVVEQSSPSPPRLGFENPLLPLANTYDDD-----DEEEEYGGRGDSGAKVGQNGR--TGE 73
+V+E+S PP LGF N LLPLAN YDDD +E ++ R + AK NG GE
Sbjct: 41 RVIERSDSPPPPLGFNNHLLPLANAYDDDDEEEGNELKKSQARRNGVAKGEGNGNKVNGE 100
Query: 74 DDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNL 131
+E DE++DD G+G+ SR VEVRRDCPYLDTVNRQV+ D V L+ +
Sbjct: 101 AQEEVDDEEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVIIIDQFLMLRVPLATM 158
>gi|291398653|ref|XP_002715595.1| PREDICTED: ubiquitin specific protease 33 [Oryctolagus cuniculus]
Length = 873
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ +R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MSALRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQAQENNVQQ 118
Query: 192 ---------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDL 240
GL NI T ++N +Q+L PL FFL R K P + + + L
Sbjct: 119 SELAFGQGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKL 178
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
++WH ++ G V P Q + K FR Q + EF+ L++ LH +L+
Sbjct: 179 MTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 231
>gi|70926345|ref|XP_735726.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509642|emb|CAH88845.1| hypothetical protein PC000558.00.0 [Plasmodium chabaudi chabaudi]
Length = 115
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 24/110 (21%)
Query: 47 DDDD---------EEEEYGGRGDSGAKVGQNGRTGEDDD-EDKDE--------DEDDLAN 88
DDDD E+ + ++ AK N R D++ DK+E +E+D N
Sbjct: 12 DDDDGVVPKRRKNEKNKNSSETETNAKNNLNKREQIDNNINDKNESYNKTTKNNENDSIN 71
Query: 89 GYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLV 138
+ R+ CPYL T+NR +LDFDFEK CS+SLSNL+VYACLV
Sbjct: 72 NTSDNNKIRV------CPYLRTINRNLLDFDFEKLCSISLSNLHVYACLV 115
>gi|70923767|ref|XP_734840.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56507951|emb|CAH86191.1| hypothetical protein PC301887.00.0 [Plasmodium chabaudi chabaudi]
Length = 164
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
L+ +L +KI++ +NFKG VSPHEFLQAV SKK F+IG +++P+ F W++N +H
Sbjct: 5 LIVVLAELLKKIYNPKNFKGVVSPHEFLQAVGIESKKNFKIGTKNDPLNFFLWIINKIH 63
>gi|207345663|gb|EDZ72415.1| YFR005Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 393
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 66/272 (24%)
Query: 144 QGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI---------------NDPS--- 185
+GR +KS A+ HS++ HHV++NL + K Y LP +I P+
Sbjct: 13 RGRHEKSPAFIHSIDENHHVFLNLTSLKFYMLPQNVQILHDGEVQLLNSIKFAAYPTYCP 72
Query: 186 --LEDIR--------------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC 229
LED +G N D+ + + + + P+R+ FL+ N+
Sbjct: 73 KDLEDFPRQCFDLSNRTYLNGFIGFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDN 130
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWL 286
+ + R +KIW + FK +S +FL S + R G+ NP++ F+ WL
Sbjct: 131 QGEFIKRLSICVKKIWSPKLFKHHLSVDDFL------SYLKVREGLNLNPIDPRLFLLWL 184
Query: 287 LNTLHSDLRNTKKNTSII-YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT 345
N + S K SI+ Y C +G++++ K E + + ++T
Sbjct: 185 FNKICSSSNELK---SILNYSC-KGKVKIAK-------------VESKPEASE---SVTG 224
Query: 346 ETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
+ PF +L LDLP F+D + +PQ+
Sbjct: 225 KVIVKPFWVLTLDLPEFSPFEDGNSVDDLPQI 256
>gi|118344206|ref|NP_001071926.1| zinc finger protein [Ciona intestinalis]
gi|92081556|dbj|BAE93325.1| zinc finger protein [Ciona intestinalis]
Length = 1145
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 27/164 (16%)
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSL 210
H T E+GH V N + D +I+ P L + GL N+ T F+N IQ+L
Sbjct: 332 HLETLLHESGHLVSPNT-------VGDTKKISQPGL---GYTGLINLGNTCFMNSVIQAL 381
Query: 211 MRVTPLRNFFLIPENYRHC----KSPL------VHRFGDLTRKIWHARNFKGQVSPHEFL 260
LRN+FL + HC K+PL F + RK+W N SPHEF
Sbjct: 382 ANTPELRNYFL--DEKFHCHINTKNPLGVGGKMAKAFYVVMRKLWGCSN--KAFSPHEFR 437
Query: 261 QAV-MKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
V +K S RF G+Q + EFM++LL+ LH DL + +TSI
Sbjct: 438 DVVGLKGS--RFTDGMQHDAHEFMAFLLDMLHEDLNTARNSTSI 479
>gi|344278786|ref|XP_003411173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Loxodonta
africana]
Length = 1108
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 99/261 (37%), Gaps = 63/261 (24%)
Query: 96 SRLVEVRRDCPYLDTV----NRQVLDFDFEKFCSVSLSNLNVYACL--VCGKYYQGRGQK 149
SR+ R CP+LD+V ++ + + N++ACL C G Q
Sbjct: 195 SRMSAFRNHCPHLDSVGEITKEDLIQKSYGTCQDCKVRGPNLWACLESRCSYVGCGESQV 254
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ THS E H++ +NL T +V+C E+ PS ++R
Sbjct: 255 DHSTTHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSSPNVRQQHSTQENSVQD 314
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 315 FKIPSNTTLKTPLVAVFDDLDVEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 374
Query: 217 RNFFL-IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 375 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGY 432
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 433 SQQDAQEFLRCLMDLLHEELK 453
>gi|301773886|ref|XP_002922367.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Ailuropoda melanoleuca]
Length = 932
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 99/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
R+ R CP+LD+V D +K C V NL +ACL C G Q
Sbjct: 28 RMAAFRNHCPHLDSVGEITKDDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 85
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 86 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLQQTQENSVQ 145
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 146 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 205
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 206 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 263
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 264 YSQQDAQEFLRCLMDLLHEELK 285
>gi|281349070|gb|EFB24654.1| hypothetical protein PANDA_011320 [Ailuropoda melanoleuca]
Length = 929
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 99/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
R+ R CP+LD+V D +K C V NL +ACL C G Q
Sbjct: 17 RMAAFRNHCPHLDSVGEITKDDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 74
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 75 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLQQTQENSVQ 134
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 135 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 194
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 195 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 252
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 253 YSQQDAQEFLRCLMDLLHEELK 274
>gi|348521962|ref|XP_003448495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Oreochromis niloticus]
Length = 911
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 98/253 (38%), Gaps = 65/253 (25%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+LD V + +K C V NL +ACL G Y G G+ H+ H
Sbjct: 8 DCPHLDCVGEITKEELIQKSHGQCQDCKVGGPNL--WACLENGCAYVGCGESHTDHSTVH 65
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI----------------------ND---------- 183
S + H++ +NL T +V+C G E+ ND
Sbjct: 66 SQDTRHNLTVNLTTLRVWCYACGKEVFLERKLGPHSPHGNSKPLPLPQNDGNKAPGSPTS 125
Query: 184 ---PS---LEDIRH-------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IP 223
PS EDI GL NI T ++N +Q+L PL FFL
Sbjct: 126 LRVPSNGGCEDIDMETEEEDEIRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECG 185
Query: 224 ENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
R K P L + L +WH +N V P Q + KA FR Q + EF
Sbjct: 186 GLVRTDKKPALCKSYQKLVSDLWH-KNRPSYVVPTNLFQGI-KAINPMFRGYAQQDSQEF 243
Query: 283 MSWLLNTLHSDLR 295
+ L++ LH +L+
Sbjct: 244 LRCLMDQLHEELK 256
>gi|410832770|gb|AFV92867.1| putative ubiquitinyl hydrolase 1, partial [Eimeria tenella]
Length = 182
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 31/104 (29%)
Query: 285 WLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNIT 344
WLLN LH D ++ K SII++CFQGE+ V D +E+G
Sbjct: 1 WLLNVLHRDQKDKKTGGSIIHDCFQGEVLV-----------TDAQSEEGR---------- 39
Query: 345 TETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ------LQRLSG 382
+ PFL L LDLPP P+FKD +++N+IP LQ+ G
Sbjct: 40 ----KTPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDG 79
>gi|410924033|ref|XP_003975486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Takifugu
rubripes]
Length = 909
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 95/256 (37%), Gaps = 68/256 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+LD V + +K C V NL +ACL G Y G G+ H+ H
Sbjct: 8 DCPHLDCVGEVTKEELIQKSHGQCQDCKVGGPNL--WACLENGCMYVGCGESHADHSTVH 65
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI---------------------NDPSLEDIRHV-- 192
S E H++ +NL T +V+C E+ DP +D R
Sbjct: 66 SQETRHNLTVNLTTLRVWCYACSKEVFLERKLGPHSLHVSGEVLPSPKDPGQDDNRMARS 125
Query: 193 -------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
GL NI T ++N +Q+L PL FFL
Sbjct: 126 PTSLKVSTSGACEDVDMETEEEDDLRAKGLTGLKNIGNTCYMNAALQALSNCPPLTQFFL 185
Query: 222 -IPENYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
R K P L + L +WH +N V P Q + KA FR Q +
Sbjct: 186 ECGGMVRTDKKPALCKSYQKLVSDLWH-KNRSSYVVPTNLFQGI-KAINPMFRGYSQQDS 243
Query: 280 VEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 244 QEFLRCLMDQLHEELK 259
>gi|13529590|gb|AAH05506.1| Usp33 protein, partial [Mus musculus]
Length = 956
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 55 KMTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQ 112
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 113 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQ 172
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 173 DFKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 232
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 233 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRG 290
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 291 YSQQDAQEFLRCLMDLLHEELK 312
>gi|33438289|dbj|BAC65724.2| mKIAA1097 protein [Mus musculus]
Length = 837
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 13 KMTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQ 70
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 71 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQ 130
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 131 DFKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 190
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 191 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRG 248
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 249 YSQQDAQEFLRCLMDLLHEELK 270
>gi|58477257|gb|AAH89315.1| Usp33 protein, partial [Mus musculus]
Length = 954
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 53 KMTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQ 110
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 111 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQ 170
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 171 DFKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 230
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 231 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRG 288
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 289 YSQQDAQEFLRCLMDLLHEELK 310
>gi|297278990|ref|XP_002808266.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33-like [Macaca mulatta]
Length = 1001
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACL--VCGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 137 KMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 194
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 195 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 254
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 255 DFKIPSNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 314
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 315 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRG 372
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 373 YSQQDAQEFLRCLMDLLHEELK 394
>gi|351698851|gb|EHB01770.1| Ubiquitin carboxyl-terminal hydrolase 33 [Heterocephalus glaber]
Length = 909
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 96/256 (37%), Gaps = 66/256 (25%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 VHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQQQIQENTVQDFKIPS 122
Query: 192 ------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
GL NI T ++N +Q+L PL FFL
Sbjct: 123 NTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFL 182
Query: 222 IPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 DCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPMFRGYCQQDA 240
Query: 280 VEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 QEFLRCLMDLLHEELK 256
>gi|119626776|gb|EAX06371.1| ubiquitin specific peptidase 33, isoform CRA_e [Homo sapiens]
Length = 942
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
>gi|332809268|ref|XP_003308213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
troglodytes]
gi|397472608|ref|XP_003807832.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
paniscus]
Length = 942
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
>gi|42516567|ref|NP_055832.3| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Homo sapiens]
gi|116242838|sp|Q8TEY7.2|UBP33_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1;
Short=hVDU1
gi|119626774|gb|EAX06369.1| ubiquitin specific peptidase 33, isoform CRA_c [Homo sapiens]
Length = 942
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
>gi|410301274|gb|JAA29237.1| ubiquitin specific peptidase 33 [Pan troglodytes]
Length = 942
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
>gi|42516561|ref|NP_963920.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Homo sapiens]
gi|16741735|gb|AAH16663.1| Ubiquitin specific peptidase 33 [Homo sapiens]
gi|119626773|gb|EAX06368.1| ubiquitin specific peptidase 33, isoform CRA_b [Homo sapiens]
gi|123981168|gb|ABM82413.1| ubiquitin specific peptidase 33 [synthetic construct]
gi|123995993|gb|ABM85598.1| ubiquitin specific peptidase 33 [synthetic construct]
Length = 828
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
>gi|10434504|dbj|BAB14279.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACL--VCGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
>gi|332809270|ref|XP_003308214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
troglodytes]
Length = 828
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
>gi|357197190|ref|NP_001239415.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Mus musculus]
Length = 901
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFL-IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|148679976|gb|EDL11923.1| ubiquitin specific peptidase 33, isoform CRA_a [Mus musculus]
Length = 901
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|148679977|gb|EDL11924.1| ubiquitin specific peptidase 33, isoform CRA_b [Mus musculus]
Length = 909
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|42516565|ref|NP_963918.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Homo sapiens]
gi|119626772|gb|EAX06367.1| ubiquitin specific peptidase 33, isoform CRA_a [Homo sapiens]
Length = 911
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|74180673|dbj|BAE25565.1| unnamed protein product [Mus musculus]
Length = 880
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|148679978|gb|EDL11925.1| ubiquitin specific peptidase 33, isoform CRA_c [Mus musculus]
Length = 897
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|18698437|gb|AAL78316.1|AF383174_1 pVHL-interacting deubiquitinating enzyme 1 [Mus musculus]
Length = 909
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|119626775|gb|EAX06370.1| ubiquitin specific peptidase 33, isoform CRA_d [Homo sapiens]
Length = 911
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|116008148|ref|NP_001070144.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Mus musculus]
Length = 897
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|116008150|ref|NP_573510.2| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Mus musculus]
gi|281312489|sp|Q8R5K2.2|UBP33_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1
gi|148921994|gb|AAI46303.1| Ubiquitin specific peptidase 33 [synthetic construct]
gi|151556748|gb|AAI48746.1| Ubiquitin specific peptidase 33 [synthetic construct]
Length = 909
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSLGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNPALKTPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFL-IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|417413151|gb|JAA52921.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 927
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 97/255 (38%), Gaps = 63/255 (24%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVS----LSNLNVYACLV--CGKYYQGRGQKSHAYTH 155
R CP+LD+V + +K S + N++ACL C G Q H+ H
Sbjct: 27 RNHCPHLDSVGEITKEDLIQKSHSTCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIH 86
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV---------------- 192
S E H++ +NL T +V+C E+ PSL +R +
Sbjct: 87 SQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLHQTQDNSVQDFKIPSN 146
Query: 193 ------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL- 221
GL NI T ++N +Q+L PL FFL
Sbjct: 147 TTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD 206
Query: 222 IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 207 CGGLVRTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQDAQ 264
Query: 281 EFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 265 EFLRCLMDLLHEELK 279
>gi|354468064|ref|XP_003496487.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus
griseus]
Length = 898
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPPQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNTALKTPLVAVFEDLDIEVDEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|344237481|gb|EGV93584.1| Ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus griseus]
Length = 910
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 67/261 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQK 149
+ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH----------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 59 DHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPPQTQENSVQD 118
Query: 192 -----------------------------------VGLNNIKETDFVNVTIQSLMRVTPL 216
GL NI T ++N +Q+L PL
Sbjct: 119 FKIPSNTALKTPLVAVFEDLDIEVDEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPL 178
Query: 217 RNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG 274
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 TQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGY 236
Query: 275 VQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 SQQDAQEFLRCLMDLLHEELK 257
>gi|194211186|ref|XP_001498483.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Equus
caballus]
Length = 961
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 99/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 49 KMSTFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 106
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 107 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLHQTQDNSIQ 166
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 167 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 226
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 227 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRG 284
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 285 YSQQDAQEFLRCLMDLLHEELK 306
>gi|332809266|ref|XP_513509.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Pan
troglodytes]
gi|397472606|ref|XP_003807831.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
paniscus]
Length = 911
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVQGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|395822081|ref|XP_003784352.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Otolemur
garnettii]
Length = 1125
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACL--VCGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 227 RNYCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 284
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 285 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPLQTQENSVQDFKIP 344
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 345 TNTTLKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 404
Query: 221 L-IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 405 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 462
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 463 AQEFLRCLMDLLHEELK 479
>gi|209413794|ref|NP_001124855.1| ubiquitin carboxyl-terminal hydrolase 33 [Pongo abelii]
Length = 910
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 VHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|75055226|sp|Q5REG5.1|UBP33_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|55726137|emb|CAH89842.1| hypothetical protein [Pongo abelii]
Length = 914
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSQGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|417413175|gb|JAA52933.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 935
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 97/255 (38%), Gaps = 63/255 (24%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKFCSVS----LSNLNVYACLV--CGKYYQGRGQKSHAYTH 155
R CP+LD+V + +K S + N++ACL C G Q H+ H
Sbjct: 27 RNHCPHLDSVGEITKEDLIQKSHSTCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIH 86
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV---------------- 192
S E H++ +NL T +V+C E+ PSL +R +
Sbjct: 87 SQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLHQTQDNSVQDFKIPSN 146
Query: 193 ------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL- 221
GL NI T ++N +Q+L PL FFL
Sbjct: 147 TTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD 206
Query: 222 IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 207 CGGLVRTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQDAQ 264
Query: 281 EFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 265 EFLRCLMDLLHEELK 279
>gi|402855020|ref|XP_003892146.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Papio anubis]
gi|380786519|gb|AFE65135.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Macaca mulatta]
Length = 911
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|55731067|emb|CAH92249.1| hypothetical protein [Pongo abelii]
Length = 789
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 VHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|296208309|ref|XP_002751018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Callithrix
jacchus]
Length = 1035
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACL--VCGKYYQGRGQ 148
++ + CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 132 KMSAFQNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 189
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 190 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQVQENNIQ 249
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 250 DFKIPSNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 309
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 310 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRG 367
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 368 YSQQDAQEFLRCLMDLLHEELK 389
>gi|440905214|gb|ELR55625.1| Ubiquitin carboxyl-terminal hydrolase 33, partial [Bos grunniens
mutus]
Length = 929
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 99/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 17 KMSSFRSHCPHLDSVGEITKEDLIQKSHGSCQDCKVRGPNL--WACLENRCSYVGCGESQ 74
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL ++ +
Sbjct: 75 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVKPLHQIQENGVQ 134
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 135 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 194
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 195 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRG 252
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 253 YSQQDAQEFLRCLMDLLHEELK 274
>gi|5689531|dbj|BAA83049.1| KIAA1097 protein [Homo sapiens]
Length = 980
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACL--VCGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 69 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 126
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 127 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 186
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 187 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 246
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++W+ ++ G V P Q + K FR
Sbjct: 247 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWY-KSRPGSVVPTTLFQGI-KTVNPTFRG 304
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 305 YSQQDAQEFLRCLMDLLHEELK 326
>gi|403258399|ref|XP_003921756.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Saimiri boliviensis boliviensis]
Length = 1020
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ + CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 132 KMSAFQNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 189
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 190 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQVQENNVQ 249
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 250 DFKIPSNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 309
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 310 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRG 367
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 368 YSQQDAQEFLRCLMDLLHEELK 389
>gi|6841314|gb|AAF29010.1|AF161450_1 HSPC332 [Homo sapiens]
Length = 261
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 266 ASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEV-VKEIPKNTI 323
SKK F+I Q + V+F+SW LN LHS L KK +I+ + FQG + + K++P +
Sbjct: 2 CSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDL 61
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQL 377
++ + D++ E++ F+ L LDLP PL+KD E+ IIPQ+
Sbjct: 62 PAEEK---EQLLHNDEYQETMVEST---FMYLTLDLPTAPLYKDEKEQLIIPQV 109
>gi|18698433|gb|AAL78314.1|AF383172_1 pVHL-interacting deubiquitinating enzyme 1 type I [Homo sapiens]
Length = 942
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++W+ ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWY-KSRPGSVVPTTLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 267 YSQQDAQEFLRCLMDLLHEELK 288
>gi|431897014|gb|ELK06278.1| Ubiquitin carboxyl-terminal hydrolase 33 [Pteropus alecto]
Length = 931
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 98/262 (37%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R C +LD+V + EK C V NL +ACL C G Q
Sbjct: 30 KMSAFRSHCSHLDSVGEITKEDLIEKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 87
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV--------- 192
H+ HS E H++ +NL T +V+C E+ PSL +R +
Sbjct: 88 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPLHQTPENSVQ 147
Query: 193 -------------------------------------GLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 148 DFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPP 207
Query: 216 LRNFFL-IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 208 LTQFFLDCGGLVRTDKKPAICKSYLKLMTELWH-KSRPGSVVPTSLFQGI-KTVNPTFRG 265
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 266 YSQQDAQEFLRCLMDLLHEELK 287
>gi|410967706|ref|XP_003990358.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Felis catus]
Length = 1042
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 95/254 (37%), Gaps = 67/254 (26%)
Query: 105 CPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAYTHS 156
CP+LD+V + +K C V NL +ACL C G Q H+ HS
Sbjct: 147 CPHLDSVGEITKEDLMQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHSTIHS 204
Query: 157 LEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH------------------ 191
E H++ +NL T +V+C E+ PSL +R
Sbjct: 205 QETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRPPHQTQENSVQDFKIPSST 264
Query: 192 ----------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
GL NI T ++N +Q+L PL FFL
Sbjct: 265 TLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDC 324
Query: 224 ENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
R K P + + + L ++WH ++ G V P Q + K FR Q + E
Sbjct: 325 GGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQDAQE 382
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 383 FLRCLMDLLHEELK 396
>gi|426215772|ref|XP_004002143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Ovis aries]
Length = 912
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 97/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RSHCPHLDSVGEITKEDLIQKSHGSCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV-------------- 192
HS E H++ +NL T +V+C E+ PSL ++ +
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVKPLHQIQENGVQDFKIP 122
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|155372005|ref|NP_001094609.1| ubiquitin carboxyl-terminal hydrolase 33 [Bos taurus]
gi|281312480|sp|A6QNM7.1|UBP33_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|151556801|gb|AAI48906.1| USP33 protein [Bos taurus]
gi|296489213|tpg|DAA31326.1| TPA: ubiquitin specific protease 33 [Bos taurus]
Length = 912
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 97/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RSHCPHLDSVGEITKEDLIQKSHGSCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRHV-------------- 192
HS E H++ +NL T +V+C E+ PSL ++ +
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVKPLHQIQENGVQDFKIP 122
Query: 193 --------------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|18698435|gb|AAL78315.1|AF383173_1 pVHL-interacting deubiquitinating enzyme 1 type II [Homo sapiens]
gi|168278803|dbj|BAG11281.1| ubiquitin carboxyl-terminal hydrolase 33 [synthetic construct]
Length = 911
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 96/257 (37%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 SNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++W+ ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWY-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|149026258|gb|EDL82501.1| rCG28827, isoform CRA_b [Rattus norvegicus]
Length = 672
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 66/260 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQ-KS 150
+ R CP+LD+V + +K C V NL +ACL Y G G+ +
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQD 58
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH------------ 191
H+ HS + H++ +NL T +V+C E+ PSL +R
Sbjct: 59 HSTIHSKKTKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQDF 118
Query: 192 ----------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
GL NI T ++N +Q+L PL
Sbjct: 119 KIPSNTALKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLT 178
Query: 218 NFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 QFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGYS 236
Query: 276 QSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 QQDAQEFLRCLMDLLHEELK 256
>gi|300797726|ref|NP_001178023.1| ubiquitin carboxyl-terminal hydrolase 33 [Rattus norvegicus]
Length = 897
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 66/260 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQ-KS 150
+ R CP+LD+V + +K C V NL +ACL Y G G+ +
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQD 58
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH------------ 191
H+ HS + H++ +NL T +V+C E+ PSL +R
Sbjct: 59 HSTIHSKKTKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQDF 118
Query: 192 ----------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
GL NI T ++N +Q+L PL
Sbjct: 119 KIPSNTALKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLT 178
Query: 218 NFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 QFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGYS 236
Query: 276 QSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 QQDAQEFLRCLMDLLHEELK 256
>gi|149026259|gb|EDL82502.1| rCG28827, isoform CRA_c [Rattus norvegicus]
Length = 680
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 66/260 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQ-KS 150
+ R CP+LD+V + +K C V NL +ACL Y G G+ +
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLIQKSHGACQDCKVRGPNL--WACLENRCSYVGCGESQD 58
Query: 151 HAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH------------ 191
H+ HS + H++ +NL T +V+C E+ PSL +R
Sbjct: 59 HSTIHSKKTKHYLTVNLTTLRVWCYACSKEVFLDRKLGTPPSLPHVRQPQQTQENSVQDF 118
Query: 192 ----------------------------------VGLNNIKETDFVNVTIQSLMRVTPLR 217
GL NI T ++N +Q+L PL
Sbjct: 119 KIPSNTALKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLT 178
Query: 218 NFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGV 275
FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 179 QFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPANLFQGI-KTVNPTFRGYS 236
Query: 276 QSNPVEFMSWLLNTLHSDLR 295
Q + EF+ L++ LH +L+
Sbjct: 237 QQDAQEFLRCLMDLLHEELK 256
>gi|332222240|ref|XP_003260275.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Nomascus leucogenys]
Length = 942
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 96/262 (36%), Gaps = 67/262 (25%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 31 KMSAFRNYCPHLDSVGEITKEDLMQKSQGTCQDCKVRGPNL--WACLENRCSYVGCGESQ 88
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 89 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPQVRQPHQIQENSVQ 148
Query: 192 ------------------------------------VGLNNIKETDFVNVTIQSLMRVTP 215
GL NI T ++N +Q+L P
Sbjct: 149 DFKIPSNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPP 208
Query: 216 LRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
L FFL R K P + + + L ++WH ++ G V P Q + K FR
Sbjct: 209 LTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRG 266
Query: 274 GVQSNPVEFMSWLLNTLHSDLR 295
Q + EF+ ++ LH D +
Sbjct: 267 YSQQDGQEFLRCFMDDLHEDXK 288
>gi|47210494|emb|CAF91634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 842
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 94/244 (38%), Gaps = 57/244 (23%)
Query: 105 CPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHS 156
CP+LD V + +K C V NL +ACL G Y G G+ H+ HS
Sbjct: 1 CPHLDCVGEVTKEELIQKSHGQCQDCKVGGPNL--WACLENGCMYVGCGESHADHSTMHS 58
Query: 157 LEAGHHVYINLRTEKVYCL-------------PDGYEINDPSL----------------- 186
E H++ +NL T +V+C P +N+ L
Sbjct: 59 QETRHNLTVNLTTLRVWCYACSKEVFLERKLGPHSLHVNNEMLPVAGSPTCLKMSTSGAC 118
Query: 187 ---------EDIRH----VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP 232
E+ H GL NI T ++N +Q+L PL FFL R K P
Sbjct: 119 EDLDMEMEEEEDLHSRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGMVRTDKKP 178
Query: 233 -LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
L + L +WH +N V P Q + K FR Q + EF+ L++ LH
Sbjct: 179 ALCKSYQKLVSDLWH-KNSSSYVVPTTLFQGI-KTINPMFRGYSQQDSQEFLRCLMDQLH 236
Query: 292 SDLR 295
+L+
Sbjct: 237 EELK 240
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 87/243 (35%), Gaps = 67/243 (27%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC-LPDGYEIN 182
C+V SN N + CL CG GR HA H E H IN VYC + D + +N
Sbjct: 31 CAVCRSNKNPWMCLACGVVLCGRYVNGHAKKHYEENQHSASINCENLAVYCYVCDDHALN 90
Query: 183 DPSLEDIRHV---------------------------------------------GLNNI 197
D E I+HV GL N+
Sbjct: 91 DNKTETIKHVRQFLQAKVNLQYEKQLKTLTGDVAGDHIDGPPRKKLAANTRANIPGLRNL 150
Query: 198 KETDFVNVTIQSLMRVTPLRNFFL-IP-----------------ENYRHCKSPLVHRFGD 239
T F+N +QSL + +F +P N +H LV
Sbjct: 151 GNTCFMNAVLQSLSNINQFCGYFKDLPAVELRSGKTAGKRIYNTRNMKHDDVSLVEEIRK 210
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
+W + +SP + L VM RFR Q + EFM +LL+ LH++L+ +
Sbjct: 211 TLCALWQGD--QTAISP-DSLFTVMWKIFPRFRGYQQQDAHEFMRYLLDRLHTELQGSTW 267
Query: 300 NTS 302
T+
Sbjct: 268 PTT 270
>gi|281312481|sp|A5PMR2.1|UBP33_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
Length = 897
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 95/256 (37%), Gaps = 68/256 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+L+ V + +K C V NL +ACL G Y G G+ H+ H
Sbjct: 8 DCPHLECVGEITKEELIQKSHGQCQDCKVGGPNL--WACLENGCSYVGCGESHADHSTVH 65
Query: 156 SLEAGHHVYINLRTEKVYC------------------LPDGYEINDP------------- 184
S E H++ +NL T +V+C LP+ + P
Sbjct: 66 SQETRHNLTVNLTTLRVWCYACTKEVFLERKLGPHKQLPNAAKAVSPVQTPCQDLNTPGS 125
Query: 185 ----------SLEDIRH-------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
+ +D+ GL NI T ++N +Q+L PL FFL
Sbjct: 126 PTSLRVPSAGTCDDLDMETEEEDELRTRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFL 185
Query: 222 IPENYRHC--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
K L + L +WH +N V P Q + KA FR Q +
Sbjct: 186 ECGGLVKTDKKPALCKSYQKLITDLWH-KNRNAYVVPTNLFQGI-KAVNPMFRGYSQQDS 243
Query: 280 VEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 244 QEFLRCLMDQLHEELK 259
>gi|432911380|ref|XP_004078651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Oryzias
latipes]
Length = 911
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 96/255 (37%), Gaps = 67/255 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+L V + +K C+V NL +ACL G Y G G+ H+ H
Sbjct: 9 DCPHLACVGEITKEELIQKSHGHCRDCNVKGPNL--WACLESGCAYVGCGESHTDHSTVH 66
Query: 156 SLEAGHHVYINLRTEKVYC------------------------LPDGYEIND-------- 183
S E+ H++ +NL T +V+C LP + D
Sbjct: 67 SQESRHNLTVNLTTLRVWCYSCSKEVFLERKLGPHSPHVSFKPLPPPQNVQDAMRDSGSP 126
Query: 184 -----PS---LEDIRH-------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI 222
PS ED+ GL NI T ++N +Q+L PL FFL
Sbjct: 127 TPLRVPSSGGCEDLDMDTEEEDDMRVRGLSGLKNIGNTCYMNAALQALSNCPPLTQFFLE 186
Query: 223 PENYRHC--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPV 280
K L + L +WH +N V P Q + KA FR Q +
Sbjct: 187 CGGLVKTDKKPALCKSYQKLVSDLWH-KNRPSYVVPTTLFQGI-KAINPMFRGYSQQDSQ 244
Query: 281 EFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 245 EFLRCLMDQLHEELK 259
>gi|118094484|ref|XP_422389.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Gallus gallus]
Length = 910
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 102/259 (39%), Gaps = 65/259 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK-- 149
+ + +CP+L++V + +K C V NL +ACL Y G G+
Sbjct: 1 MSSLSSNCPHLESVGEITKEELIQKSHGSCQDCKVRGPNL--WACLENRCTYVGCGETHV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYC------------------LPDG------------- 178
H+ THS E H + +NL T +V+C LPD
Sbjct: 59 DHSTTHSQETKHCLTVNLTTLRVWCYACSKEVFLDRKLGSHSPLPDARLTQTQENSVQDF 118
Query: 179 --------------------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRN 218
E+ + L+ GL NI T ++N +Q+L PL +
Sbjct: 119 KMPSIPTLKIPLSAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTH 178
Query: 219 FFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
FFL R K P + + + L ++WH +N G V P Q + K+ FR Q
Sbjct: 179 FFLDCGGLARTDKKPAICKSYLKLMTELWH-KNRPGSVVPTGLFQGI-KSVNPTFRGYSQ 236
Query: 277 SNPVEFMSWLLNTLHSDLR 295
+ EF+ L++ LH +L+
Sbjct: 237 QDAQEFLRCLMDLLHEELK 255
>gi|47086035|ref|NP_998392.1| ubiquitin carboxyl-terminal hydrolase 33 [Danio rerio]
gi|46362501|gb|AAH66557.1| Ubiquitin specific peptidase 33 [Danio rerio]
Length = 897
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 95/256 (37%), Gaps = 68/256 (26%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+L+ V + +K C V NL +ACL G Y G G+ H+ H
Sbjct: 8 DCPHLECVGEITKEELIQKSHGQCQDCKVGGPNL--WACLENGCSYVGCGESHADHSTVH 65
Query: 156 SLEAGHHVYINLRTEKVYC------------------LPDGYEINDP------------- 184
S E H++ +NL T +V+C LP+ + P
Sbjct: 66 SQETRHNLTVNLTTLRVWCYACTKEVFLERKLGPHKQLPNAAKAVSPVQTPCQDLNTPGS 125
Query: 185 ----------SLEDIRH-------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
+ +D+ GL NI T ++N +Q+L PL FFL
Sbjct: 126 PTSLRVPSAGTCDDLDMETEEEDELRTRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFL 185
Query: 222 IPENYRHC--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
K L + L +WH +N V P Q + KA FR Q +
Sbjct: 186 ECGGLVKTDKKPALCKSYQKLVTDLWH-KNRNSYVVPTNLFQGI-KAVNPMFRGYSQQDS 243
Query: 280 VEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 244 QEFLRCLMDQLHEELK 259
>gi|345801778|ref|XP_537108.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Canis lupus familiaris]
Length = 907
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 62/252 (24%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYC--------------------------------LPDGYEI 181
HS E H++ +NL T +V+C +P +
Sbjct: 63 IHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPPLPHSAVFSVIKDFKIPSNTTL 122
Query: 182 NDPSLE-----DIR-----------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPEN 225
P + DI GL NI T ++N +Q+L PL FFL
Sbjct: 123 KTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGG 182
Query: 226 Y-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
R K P + + + L ++WH ++ G V P Q + K FR Q + EF+
Sbjct: 183 LARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQDAQEFL 240
Query: 284 SWLLNTLHSDLR 295
L++ LH +L+
Sbjct: 241 RCLMDLLHEELK 252
>gi|326925187|ref|XP_003208801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Meleagris
gallopavo]
Length = 910
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 102/259 (39%), Gaps = 65/259 (25%)
Query: 98 LVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK-- 149
+ + +CP+L++V + +K C V NL +ACL Y G G+
Sbjct: 1 MASLSSNCPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENRCTYVGCGESHV 58
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYC------------------LPDG------------- 178
H+ THS E H + +NL T +V+C LP+
Sbjct: 59 DHSTTHSQETKHCLTVNLTTLRVWCYACSKEVFLDRKLGCHSPLPNARLTQTLENSVQDF 118
Query: 179 --------------------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRN 218
E+ + L+ GL NI T ++N +Q+L PL +
Sbjct: 119 KIPSVPTLKIPLSAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTH 178
Query: 219 FFL-IPENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ 276
FFL R K P + + + L ++WH +N G V P Q + K+ FR Q
Sbjct: 179 FFLDCGGLARTDKKPAICKSYLKLMTELWH-KNRPGSVVPTGLFQGI-KSVNPTFRGYSQ 236
Query: 277 SNPVEFMSWLLNTLHSDLR 295
+ EF+ L++ LH +L+
Sbjct: 237 QDAQEFLRCLMDLLHEELK 255
>gi|218184165|gb|EEC66592.1| hypothetical protein OsI_32808 [Oryza sativa Indica Group]
Length = 788
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 177 DGYEINDPSLEDIRHV-GLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRH 228
DGY ++ + +DI + GL+N+ T F+N IQSL+ PL +FL EN
Sbjct: 295 DGYSFSNGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLG 354
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
+ L FG+L RK+W A + ++P F + + + + F Q + E +++LL+
Sbjct: 355 LQGELATAFGELLRKLWSAG--RTSIAPRPFKTKLSRFAPQ-FSGYNQHDSQELLAFLLD 411
Query: 289 TLHSDLRNTKKNTSI 303
LH DL KK I
Sbjct: 412 GLHEDLNRVKKKPYI 426
>gi|62859025|ref|NP_001016228.1| ubiquitin carboxyl-terminal hydrolase 33 [Xenopus (Silurana)
tropicalis]
gi|123892401|sp|Q28CN3.1|UBP33_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|89268163|emb|CAJ82183.1| ubiquitin specific protease 33 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 95/249 (38%), Gaps = 61/249 (24%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+L++V + +K C V NL +ACL G Y G G+ H+ H
Sbjct: 7 DCPHLESVGEVTKEELIKKSHGSCQDCRVRGPNL--WACLENGCSYVGCGESHVDHSTLH 64
Query: 156 SLEAGHHVYINLRTEKVYCL---------------PDGYEINDPSLEDIRH--------- 191
S + H + +NL T +V+C P ++ D ++ +
Sbjct: 65 SQDTKHCLTVNLTTLRVWCYTCSKEVFLDRKLSTQPTSAKLQDSHTQESKMSSSLTLKIP 124
Query: 192 -----------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
GL NI T ++N +Q+L PL ++FL
Sbjct: 125 AAVVSENLDIELEEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLAR 184
Query: 229 C--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
K L + L IWH +N G V P Q + K+ FR Q + EF+ L
Sbjct: 185 TDKKPALCKSYQKLMSDIWH-KNRPGFVIPTNLFQGI-KSVNPTFRGYSQQDAQEFLRCL 242
Query: 287 LNTLHSDLR 295
++ LH +L+
Sbjct: 243 MDVLHEELK 251
>gi|115481222|ref|NP_001064204.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|78707833|gb|ABB46808.1| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
gi|113638813|dbj|BAF26118.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|215767234|dbj|BAG99462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612471|gb|EEE50603.1| hypothetical protein OsJ_30790 [Oryza sativa Japonica Group]
Length = 931
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 177 DGYEINDPSLEDIRHV-GLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRH 228
DGY ++ + +DI + GL+N+ T F+N IQSL+ PL +FL EN
Sbjct: 295 DGYSFSNGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLG 354
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
+ L FG+L RK+W A + ++P F + + + + F Q + E +++LL+
Sbjct: 355 LQGELATAFGELLRKLWSAG--RTSIAPRPFKTKLSRFAPQ-FSGYNQHDSQELLAFLLD 411
Query: 289 TLHSDLRNTKKNTSI 303
LH DL KK I
Sbjct: 412 GLHEDLNRVKKKPYI 426
>gi|213624427|gb|AAI71081.1| hypothetical protein LOC548982 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 95/249 (38%), Gaps = 61/249 (24%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
DCP+L++V + +K C V NL +ACL G Y G G+ H+ H
Sbjct: 7 DCPHLESVGEVTKEELIKKSHGSCQDCRVRGPNL--WACLENGCSYVGCGESHVDHSTLH 64
Query: 156 SLEAGHHVYINLRTEKVYCL---------------PDGYEINDPSLEDIRH--------- 191
S + H + +NL T +V+C P ++ D ++ +
Sbjct: 65 SQDTKHCLTVNLTTLRVWCYTCSKEVFLDRKLSTQPTSAKLQDSHTQESKMSSSLTLKIP 124
Query: 192 -----------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
GL NI T ++N +Q+L PL ++FL
Sbjct: 125 AAVVSENLDIELEEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLAR 184
Query: 229 C--KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
K L + L IWH +N G V P Q + K+ FR Q + EF+ L
Sbjct: 185 TDKKPALCKSYQKLMSDIWH-KNRPGFVIPTNLFQGI-KSVNPTFRGYSQQDAQEFLRCL 242
Query: 287 LNTLHSDLR 295
++ LH +L+
Sbjct: 243 MDVLHEELK 251
>gi|327276735|ref|XP_003223123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 1
[Anolis carolinensis]
Length = 897
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 86/221 (38%), Gaps = 59/221 (26%)
Query: 132 NVYACLVCGKYYQGRGQK--SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------- 181
N++ACL Y G G+ H+ HS E H + +NL T +V+C E+
Sbjct: 39 NLWACLENRCSYVGCGESHIDHSTIHSQETKHCLTVNLTTLRVWCYACSKEVFLDRKLRS 98
Query: 182 -------------NDPSLEDIRH--------------------------------VGLNN 196
D +++DIR GL N
Sbjct: 99 HSLLQNVRLSHQAPDINMQDIRLPSIPTLKIPLIATFDDLDIQVDEEDEFKARGLTGLKN 158
Query: 197 IKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQV 254
I T ++N +Q+L PL FFL N R K P + R + L ++WH ++ G V
Sbjct: 159 IGNTCYMNAALQALSNCPPLTQFFLDCGNLARTDKKPAICRSYYKLMTELWH-KSRPGAV 217
Query: 255 SPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
P Q + K FR Q + EF+ L++ LH +L+
Sbjct: 218 VPTNLFQGI-KTVNPAFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|348586746|ref|XP_003479129.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Cavia
porcellus]
Length = 857
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 95/257 (36%), Gaps = 67/257 (26%)
Query: 102 RRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLV--CGKYYQGRGQKSHAY 153
R CP+LD+V + +K C V NL +ACL C G Q H+
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHGTCQDCKVRGPNL--WACLENRCSYVGCGESQVDHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH--------------- 191
HS + H++ +NL T +V+C E+ SL +R
Sbjct: 63 IHSQDTKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQTSLPHVRQPQQIQENSVQDFKIP 122
Query: 192 -------------------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFF 220
GL NI T ++N +Q+L PL FF
Sbjct: 123 NNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Query: 221 LIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSN 278
L R K P + + + L ++WH ++ G V P Q + K FR Q +
Sbjct: 183 LDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPTFRGYSQQD 240
Query: 279 PVEFMSWLLNTLHSDLR 295
EF+ L++ LH +L+
Sbjct: 241 AQEFLRCLMDLLHEELK 257
>gi|357145636|ref|XP_003573712.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Brachypodium distachyon]
Length = 931
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 177 DGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYR 227
DGY ++D H GL+N+ T F+N IQ+L+ PL +FL EN
Sbjct: 296 DGYSSFSNGVKDDMHGLSGLHNLGNTCFMNSAIQALVHTPPLVQYFLKDYSQEINTENPL 355
Query: 228 HCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
+ L FGDL +K+W A + V P F ++ + +F Q + E +++LL
Sbjct: 356 GLQGELAVAFGDLLQKLWSAG--RTSVPPRAF-KSKLSRFAPQFSGYNQHDSQELLAFLL 412
Query: 288 NTLHSDLRNTKKNTSIIYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITT 345
+ LH DL KK I + G E E +E N + ND G +
Sbjct: 413 DGLHEDLNRVKKKPYIEAKDADGRPEEEFAEECWNNHKARNDSIIVDKFQGQYKSTLVCP 472
Query: 346 ETSRM-----PFLMLGLDLP 360
E +++ PF+ L L LP
Sbjct: 473 ECNKISVTFDPFMYLSLPLP 492
>gi|327276737|ref|XP_003223124.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 2
[Anolis carolinensis]
Length = 890
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 84/214 (39%), Gaps = 52/214 (24%)
Query: 132 NVYACLVCGKYYQGRGQK--SHAYTHSLEAGHHVYINLRTEKVYCLPDGYE--------- 180
N++ACL Y G G+ H+ HS E H + +NL T +V+C E
Sbjct: 39 NLWACLENRCSYVGCGESHIDHSTIHSQETKHCLTVNLTTLRVWCYACSKEVFLDRKLRS 98
Query: 181 -------------INDPSLEDIR------------------------HVGLNNIKETDFV 203
I PS+ ++ GL NI T ++
Sbjct: 99 HSLLQNVRLSHQDIRLPSIPTLKIPLIATFDDLDIQVDEEDEFKARGLTGLKNIGNTCYM 158
Query: 204 NVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQ 261
N +Q+L PL FFL N R K P + R + L ++WH ++ G V P Q
Sbjct: 159 NAALQALSNCPPLTQFFLDCGNLARTDKKPAICRSYYKLMTELWH-KSRPGAVVPTNLFQ 217
Query: 262 AVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
+ K FR Q + EF+ L++ LH +L+
Sbjct: 218 GI-KTVNPAFRGYSQQDAQEFLRCLMDLLHEELK 250
>gi|440803342|gb|ELR24249.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 916
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+F ++ + C+ + R + A +
Sbjct: 12 AGLHNVGNTCFLNSTLQCLTYCPPLANYFQSRQHSKACRKVGFCAMCVMERHVVAALKAT 71
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-SDLRNTKK------NTSI 303
G + P E + + ++A K FR+G Q + EF+ +LL+ +H S L +K TS+
Sbjct: 72 SGAIVPKEIV-SQLRAIVKHFRLGRQEDAQEFLCYLLSGMHKSSLPQGEKLEARIEQTSV 130
Query: 304 IYECFQGELE 313
++ F G L+
Sbjct: 131 VHRIFGGHLQ 140
>gi|301103855|ref|XP_002901013.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262101351|gb|EEY59403.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 1100
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 37/205 (18%)
Query: 184 PSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPLVHR----- 236
P E + VGL+N+ T F+N +Q L+ PLR +FL +PE C + ++R
Sbjct: 461 PEFEGV--VGLSNLGNTCFMNSMLQCLINTAPLREYFLKKVPETGTLCFTKEINRDNPLG 518
Query: 237 --------FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
F L RK+W + FK V+P + L++V+ +F Q + E M++LL+
Sbjct: 519 MKGIMAVDFASLLRKMW-SNEFK-VVTPTK-LKSVIGQYAPQFAGYQQQDSQELMNFLLD 575
Query: 289 TLHSDL-------------RNTKKNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSD 335
LH DL RN + + + E +Q L + + G ++ SD
Sbjct: 576 GLHEDLNRVKAKPYTKPVERNGRSDADVAREEWQQFLRRNDSVIVDNFMGQLRSHVTCSD 635
Query: 336 GGDDHDNITTETSRMPFLMLGLDLP 360
H+++T + P++ L + +P
Sbjct: 636 ADCGHESVTFD----PYMSLSVPIP 656
>gi|145546913|ref|XP_001459139.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426962|emb|CAK91742.1| unnamed protein product [Paramecium tetraurelia]
Length = 1025
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS--------PL 233
+D S++ I GL+N+ T F+N Q L PL+ +F+ + + L
Sbjct: 365 SDNSIKGI--AGLSNLGNTCFMNSGTQCLSNTYPLKEYFISNKYFEEINEDNPLGTNGQL 422
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
V +FG L +K+W K V P F +AV + + F+ Q + E +++LL+ LH D
Sbjct: 423 VRKFGSLLKKLWCGD--KNVVIPTSFKKAVGQF-QPMFKGFQQHDSSELITFLLDGLHED 479
Query: 294 LRNTKKNTSIIYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM- 350
L KK + + +QG ++EV KE +N ++ N Q+ G + T +
Sbjct: 480 LNRVKKKPYVESKDYQGRPDVEVAKESWENHLARN-QSIIVDLMHGQYKSTLKCPTCQQI 538
Query: 351 -----PFLMLGLDLP 360
PFL +GL +P
Sbjct: 539 SITFDPFLTVGLGIP 553
>gi|224088124|ref|XP_002308332.1| predicted protein [Populus trichocarpa]
gi|222854308|gb|EEE91855.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 17/182 (9%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL N+ T F+N IQ L L ++FL EN K L FGDL K+W
Sbjct: 33 GLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYGKEINQENLLGTKGELALAFGDLLSKLW 92
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
R+ V+P F + + + + F Q + EF+S+LL+ LH DL K I
Sbjct: 93 TPRD--TPVAPAIFKRKLADFAPQ-FSGYNQHDSQEFLSFLLDGLHEDLNRVKSKPYIAI 149
Query: 306 ECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGLD 358
+ +G L+ V +E +N ++ ND G + ++ PF+ L L
Sbjct: 150 KDAEGRLDEVVAEEYWRNHLARNDSIIVDLCQGQYQSTLVCPACNKKSVTFDPFMYLSLP 209
Query: 359 LP 360
LP
Sbjct: 210 LP 211
>gi|410979290|ref|XP_003996018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Felis catus]
Length = 913
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 54/243 (22%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L F + C S ++ N++ACL Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEDLLFKSKGACQSCGVTGPNLWACLQVSCSYVGCGESFADHSTIHAQA 67
Query: 159 AGHHVYINLRTEKVYCLPDGYEI-------------------NDPSL------------- 186
H++ +NL T +V+C E+ DP L
Sbjct: 68 KKHNLTVNLTTFRVWCYACEKEVFLKQRLAAPLAGPSPKFSEQDPPLPSHPLKAVPIAVA 127
Query: 187 ---------EDIRH---VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP- 232
+D++ G+ N+ + ++N +Q+L PL FFL R K P
Sbjct: 128 DEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA 187
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L + L ++WH R V P + K FR Q + EF+ L++ LH
Sbjct: 188 LCKSYQKLVSEVWH-RKRPSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHE 245
Query: 293 DLR 295
+L+
Sbjct: 246 ELK 248
>gi|353238811|emb|CCA70745.1| related to UBP12-ubiquitin C-terminal hydrolase [Piriformospora
indica DSM 11827]
Length = 1142
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
VGLNN+ T F+N +Q L L +FL P N K + FG + K
Sbjct: 400 VGLNNLGNTCFMNSALQCLAHTPELTEYFLTGVYRTELNPTNPLGMKGAIAEVFGGVLDK 459
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+WH ++ V+P EF Q + + + + F Q + EF+++LL+ LH DL K +
Sbjct: 460 LWHPISYA--VAPREFKQQLQRFAPQ-FSGYAQHDTQEFLAFLLDGLHEDLNRVLKKPYV 516
Query: 304 IYECFQ--GELEVVK 316
+ GE E+VK
Sbjct: 517 ENPDWNGGGEKELVK 531
>gi|440797226|gb|ELR18321.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 926
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 107/295 (36%), Gaps = 66/295 (22%)
Query: 121 EKFCSVSLSNLNVYACLV--CGKYYQGRGQKSHAYTH-------SLEAGHHVYINLRTEK 171
E CS L +L +ACL C GR Q H H ++ H V INLRT+
Sbjct: 37 ETQCSHGLPHL--WACLGANCTFIGCGRDQNKHLMAHYNLAKKRNMGEEHCVCINLRTKM 94
Query: 172 VYCLPDGYEINDPSLEDIRHV-------------------------GLNNIKETDFVNVT 206
V+C E+ L + + GL N+ T + N
Sbjct: 95 VWCYACDEEVIVEQLREALAIPVASPVPASRPATALSTSTHTRGACGLANLGNTCYANAA 154
Query: 207 IQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQA 262
+Q L PLR +FL R SPLV F L +W R + P E L+
Sbjct: 155 MQCLSNCPPLRTYFLRYMARQVKGRKKTSPLVFHFTQLIYDMWGGR--YSSLRPGEVLRE 212
Query: 263 VMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNT 322
+ + + F Q + EFM LL+ LH D + EL ++ P ++
Sbjct: 213 IRRFNPM-FGGYAQQDSQEFMRCLLDRLHEDTKE--------------ELPRIESSPTSS 257
Query: 323 ISGNDQNTEKGS---DGGDDHDNITTET------SRMPFLMLGLDLPPPPLFKDV 368
S + EK + G D N E+ SR+ L G P F D+
Sbjct: 258 GSADSGEKEKETKPPQGHDSDSNGVVESTPGYLLSRIKCLKCGKVSPTKDAFYDL 312
>gi|281349489|gb|EFB25073.1| hypothetical protein PANDA_003242 [Ailuropoda melanoleuca]
Length = 910
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 54/248 (21%)
Query: 100 EVRRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAY 153
+ R CP+LD+ V ++ L F + C S +S N++ACL Y G G+ H+
Sbjct: 3 DTRDLCPHLDSIGEVTKEDLLFKSKGVCQSCGVSGPNLWACLQVSCPYVGCGESFADHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCL---------------PDG-------------------- 178
H+ H++ +NL T +V+C P G
Sbjct: 63 IHAQAKKHNLTVNLNTFRVWCYACEKEVFLEQRLAAHPAGPSPRFSEQDAPLPSHPLKAV 122
Query: 179 ---------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRH 228
E D L+ G+ N+ + ++N +Q+L PL FFL R
Sbjct: 123 PIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRT 182
Query: 229 CKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
K P L + L ++WH R V P + K FR Q + EF+ L+
Sbjct: 183 DKKPALCKSYQKLVSEVWHRRR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLM 240
Query: 288 NTLHSDLR 295
+ LH +L+
Sbjct: 241 DQLHEELK 248
>gi|426226105|ref|XP_004007194.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Ovis aries]
Length = 992
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 94/243 (38%), Gaps = 54/243 (22%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L + C S +S N++ACL Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEDLLLKSKSTCQSCGVSGPNLWACLQVSCSYVGCGESFADHSTLHAQA 67
Query: 159 AGHHVYINLRTEKVYCLPDGYEI---------------------NDPSLEDIRHV----- 192
H++ +NL T +V+C E+ + P +R V
Sbjct: 68 KKHNLTVNLTTLRVWCYACEKEVLLQPRLATHPPGPAPKFSEQDSPPPSPPLRAVPIAVA 127
Query: 193 ------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP- 232
G+ N+ + ++N +Q+L PL FFL R K P
Sbjct: 128 DEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA 187
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L + L ++WH R V P + K FR Q + EF+ L++ LH
Sbjct: 188 LCKSYQKLVSEVWH-RKRPSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHE 245
Query: 293 DLR 295
+L+
Sbjct: 246 ELK 248
>gi|356535266|ref|XP_003536169.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
[Glycine max]
Length = 931
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +IQ L+ PL +FL +N + L FGDL RK+
Sbjct: 319 AGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMRGELALAFGDLLRKL 378
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + + ++P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 379 WSSG--RTAIAPRAFKSKLARFAPQ-FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 435
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + EV E KN ++ ND G + ++ PF+ L L
Sbjct: 436 MKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSL 495
Query: 358 DLP 360
LP
Sbjct: 496 PLP 498
>gi|301758848|ref|XP_002915285.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Ailuropoda melanoleuca]
Length = 912
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 54/248 (21%)
Query: 100 EVRRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAY 153
+ R CP+LD+ V ++ L F + C S +S N++ACL Y G G+ H+
Sbjct: 3 DTRDLCPHLDSIGEVTKEDLLFKSKGVCQSCGVSGPNLWACLQVSCPYVGCGESFADHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCL---------------PDG-------------------- 178
H+ H++ +NL T +V+C P G
Sbjct: 63 IHAQAKKHNLTVNLNTFRVWCYACEKEVFLEQRLAAHPAGPSPRFSEQDAPLPSHPLKAV 122
Query: 179 ---------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRH 228
E D L+ G+ N+ + ++N +Q+L PL FFL R
Sbjct: 123 PIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRT 182
Query: 229 CKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
K P L + L ++WH R V P + K FR Q + EF+ L+
Sbjct: 183 DKKPALCKSYQKLVSEVWHRRR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLM 240
Query: 288 NTLHSDLR 295
+ LH +L+
Sbjct: 241 DQLHEELK 248
>gi|356535264|ref|XP_003536168.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
[Glycine max]
Length = 926
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +IQ L+ PL +FL +N + L FGDL RK+
Sbjct: 319 AGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMRGELALAFGDLLRKL 378
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + + ++P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 379 WSSG--RTAIAPRAFKSKLARFAPQ-FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 435
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + EV E KN ++ ND G + ++ PF+ L L
Sbjct: 436 MKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSL 495
Query: 358 DLP 360
LP
Sbjct: 496 PLP 498
>gi|345316759|ref|XP_001507122.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like, partial
[Ornithorhynchus anatinus]
Length = 631
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 96/253 (37%), Gaps = 66/253 (26%)
Query: 105 CPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHS 156
CP+L++V + +K C V NL +ACL G Y G G+ H+ HS
Sbjct: 8 CPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENGCSYVGCGESYVDHSTIHS 65
Query: 157 LEAGHHVYINLRTEKVYCLPDGYEI----------NDPSLEDIRHV-------------- 192
+ H + +NL T +V+C E+ PS ++ V
Sbjct: 66 QDTKHCLTVNLTTLRVWCYACSKEVFLDRKLGTQSPLPSARQLQQVQENVQDFKISGTPT 125
Query: 193 ----------------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL-IP 223
GL NI T ++N +Q+L PL FFL
Sbjct: 126 LKMPLAAVFDDLDIEVEEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCG 185
Query: 224 ENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
R K P + + + L ++WH ++ G V P Q + K FR Q + EF
Sbjct: 186 GLVRTDKKPAICKSYLKLMTELWH-KSRPGSVVPTNLFQGI-KTVNPAFRGYSQQDAQEF 243
Query: 283 MSWLLNTLHSDLR 295
+ L++ LH +L+
Sbjct: 244 LRCLMDLLHEELK 256
>gi|449508398|ref|XP_002189650.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Taeniopygia guttata]
Length = 911
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 66/254 (25%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
+CP+L++V + +K C V NL +ACL Y G G+ H+ TH
Sbjct: 7 NCPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENKCTYVGCGESHVDHSTTH 64
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI--------------------------------ND 183
S E H + +NL T +V+C E+ ++
Sbjct: 65 SQETKHCLTVNLTTLRVWCYACSKEVFLDRKLGSHSPLPSTRLSHQAQENNVQDFKIPSN 124
Query: 184 PSLE----------DIR----------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP 223
P+L+ DI GL NI T ++N +Q+L PL +FFL
Sbjct: 125 PTLKIPLAAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDC 184
Query: 224 ENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
R K P + + + L ++WH ++ G V P Q + K FR Q + E
Sbjct: 185 GGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTGLFQGI-KTVNPMFRGYSQQDAQE 242
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 243 FLRCLMDLLHEELK 256
>gi|345805954|ref|XP_537816.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Canis lupus
familiaris]
Length = 915
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 54/246 (21%)
Query: 102 RRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
R CP+LD+ V ++ L F + C S ++ N++ACL Y G G+ H+ H
Sbjct: 5 RDFCPHLDSIGEVTKEDLLFKSKGACQSCGVTGPNLWACLQVACPYVGCGESFADHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYCL---------------PDG---------------------- 178
+ H++ +NL T +V+C P G
Sbjct: 65 AQAKKHNLTVNLTTFRVWCYACEKEVFLEQRLAAHPAGPSPRFSEQDSPLPSHPLKAVPI 124
Query: 179 -------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCK 230
E D L+ G+ N+ + ++N +Q+L PL FFL R K
Sbjct: 125 AVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDK 184
Query: 231 SP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
P L + L ++WH R V P + K FR Q + EF+ L++
Sbjct: 185 KPALCKSYQKLVSEVWHRRR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLCCLMDQ 242
Query: 290 LHSDLR 295
LH +L+
Sbjct: 243 LHEELK 248
>gi|449508402|ref|XP_004176928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2
[Taeniopygia guttata]
Length = 903
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 66/254 (25%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
+CP+L++V + +K C V NL +ACL Y G G+ H+ TH
Sbjct: 7 NCPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENKCTYVGCGESHVDHSTTH 64
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI--------------------------------ND 183
S E H + +NL T +V+C E+ ++
Sbjct: 65 SQETKHCLTVNLTTLRVWCYACSKEVFLDRKLGSHSPLPSTRLSHQAQENNVQDFKIPSN 124
Query: 184 PSLE----------DIR----------HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-I 222
P+L+ DI GL NI T ++N +Q+L PL +FFL
Sbjct: 125 PTLKIPLAAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDC 184
Query: 223 PENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
R K P + + + L ++WH ++ G V P Q + K FR Q + E
Sbjct: 185 GGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTGLFQGI-KTVNPMFRGYSQQDAQE 242
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 243 FLRCLMDLLHEELK 256
>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
Length = 1002
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 30/192 (15%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNFK 251
GL N+ T F+N T+Q L PL N+ E+ + CK P +L R I N
Sbjct: 100 GLVNMGNTCFLNSTLQCLAYTAPLVNYCFSGEHNQTCKQPGFCMMCELQRHIKRCYENSG 159
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSII 304
+ P LQ +K K G Q + EF+ ++++++ H+ L K T+++
Sbjct: 160 SNIKPQAILQK-LKMIAKHMHWGRQEDAHEFLRYVVDSMQKSILNGHAKLDKFSKETTVV 218
Query: 305 YECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPL 364
+ F G L + + N + PFL + LD+ P
Sbjct: 219 NQIFGGYLRSQVQCLRCKEKSNTYD---------------------PFLDISLDIKTVPS 257
Query: 365 FKDVMEKNIIPQ 376
+ EK ++P+
Sbjct: 258 LEKAFEKYVLPE 269
>gi|409040949|gb|EKM50435.1| hypothetical protein PHACADRAFT_129620 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1312
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
+GL N+ T F+N IQ L+ L ++FL P+N + FG L RK
Sbjct: 409 LGLGNMGNTCFMNSAIQCLVHTPELADYFLTGVFEKELNPDNPLGMHGQIAQAFGALLRK 468
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW + SP EF +AV+ +F Q + E +++LL+ LH DL K +
Sbjct: 469 IWAPTSSATSYSPREF-KAVLSKFAPQFSGYQQHDSQELVAFLLDGLHEDLNRIIKKPYV 527
Query: 304 IYECFQG 310
++G
Sbjct: 528 EKPDWEG 534
>gi|395516315|ref|XP_003762336.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 4 [Sarcophilus harrisii]
Length = 989
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 322 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKNEYEAEINRDNPLGMKGEIAEAYAELIKQ 381
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W RN QV+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 382 MWSGRN--TQVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 438
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G +L V KE +N ND G + E S++ PF L
Sbjct: 439 ELKDANGRPDLVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECSKISVTFDPFCYLT 498
Query: 357 LDLP 360
L LP
Sbjct: 499 LPLP 502
>gi|449275838|gb|EMC84595.1| Ubiquitin carboxyl-terminal hydrolase 33 [Columba livia]
Length = 911
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 99/254 (38%), Gaps = 66/254 (25%)
Query: 104 DCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
+CP+L++V + +K C V NL +ACL Y G G+ H+ TH
Sbjct: 7 NCPHLESVGEITKEELIQKSHGTCQDCKVRGPNL--WACLENRCTYVGCGESYVDHSTTH 64
Query: 156 SLEAGHHVYINLRTEKVYC------------------LPDG------------------- 178
S E H + +NL T +V+C LP+
Sbjct: 65 SQETKHCLTVNLTTLRVWCYACSKEVFLDRKLRSHSPLPNARLSHHAQENSVQDFKIPSN 124
Query: 179 ---------------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-I 222
E+ + L+ GL NI T ++N +Q+L PL +FFL
Sbjct: 125 PTLKIPLAAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDC 184
Query: 223 PENYRHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVE 281
R K P + + + L ++WH ++ G V P Q + K FR Q + E
Sbjct: 185 GGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTGLFQGI-KTVNPTFRGYSQQDAQE 242
Query: 282 FMSWLLNTLHSDLR 295
F+ L++ LH +L+
Sbjct: 243 FLRCLMDLLHEELK 256
>gi|197099624|ref|NP_001125307.1| ubiquitin carboxyl-terminal hydrolase 4 [Pongo abelii]
gi|75055118|sp|Q5RCD3.1|UBP4_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|55727639|emb|CAH90574.1| hypothetical protein [Pongo abelii]
Length = 963
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G +VV KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDVVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|403298497|ref|XP_003940054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Saimiri
boliviensis boliviensis]
Length = 915
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 97/254 (38%), Gaps = 54/254 (21%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQKS--HAYTHSLE 158
CP+LD+ V ++ L + C S ++ N++ACL Y G G+ S H+ H+
Sbjct: 8 CPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESSADHSTIHAQT 67
Query: 159 AGHHVYINLRTEKVYCL---------------PDGY------------------------ 179
H++ +NL T +++C P G
Sbjct: 68 KKHNLTVNLTTFRLWCYACEKEVFLEQQLVAPPPGSFSKFSEQDSPPPSHPLKAVPIAVA 127
Query: 180 -----EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP- 232
E D L+ G+ N+ + ++N +Q+L PL FFL R K P
Sbjct: 128 DEGESESEDDDLKPRGLTGMKNVGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA 187
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L + L ++WH + V P + K FR Q + EF+ L++ LH
Sbjct: 188 LCKSYQKLVSEVWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHE 245
Query: 293 DLRNTKKNTSIIYE 306
+L+ T + E
Sbjct: 246 ELKEPAVATVALME 259
>gi|196005611|ref|XP_002112672.1| hypothetical protein TRIADDRAFT_56945 [Trichoplax adhaerens]
gi|190584713|gb|EDV24782.1| hypothetical protein TRIADDRAFT_56945 [Trichoplax adhaerens]
Length = 930
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 181 INDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-----NYRH---CKSP 232
+ND + GLNN+ T F+N +Q + PLR+FFL + NY + K
Sbjct: 360 VNDLKIVRDGMTGLNNLGNTCFMNSILQCMSNTRPLRDFFLECDLRNEINYDNPLGSKGA 419
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
+V F L R +W + SP + L++++ A +F Q + EFM++LL+ LH
Sbjct: 420 IVAAFAVLIRTLWCGK--YHSYSPSK-LKSLVAAKATQFMGYAQQDAQEFMAYLLDGLHE 476
Query: 293 DLRNTK 298
DL +
Sbjct: 477 DLNRVR 482
>gi|356576622|ref|XP_003556429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
[Glycine max]
Length = 928
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +IQ L+ PL +FL +N L FGDL RK+
Sbjct: 321 AGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMCGELALAFGDLLRKL 380
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + + ++P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 381 WSSG--RTAIAPRAFKSKLARFAPQ-FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 437
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + EV E KN ++ ND G + ++ PF+ L L
Sbjct: 438 MKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSL 497
Query: 358 DLP 360
LP
Sbjct: 498 PLP 500
>gi|356576624|ref|XP_003556430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
[Glycine max]
Length = 933
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +IQ L+ PL +FL +N L FGDL RK+
Sbjct: 321 AGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMCGELALAFGDLLRKL 380
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + + ++P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 381 WSSG--RTAIAPRAFKSKLARFAPQ-FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 437
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + EV E KN ++ ND G + ++ PF+ L L
Sbjct: 438 MKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSL 497
Query: 358 DLP 360
LP
Sbjct: 498 PLP 500
>gi|363740497|ref|XP_415470.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Gallus gallus]
Length = 892
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 92/242 (38%), Gaps = 48/242 (19%)
Query: 100 EVRRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAY 153
+ R CP+LD+ V R L + C S N++ACL G Y G G+ H+
Sbjct: 3 DTRDICPHLDSIGEVTRDDLLLKSKGTCQSCGAVGPNLWACLQIGCPYVGCGESFADHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEI-------------------------------- 181
H+ H++ +NL T +V+C E+
Sbjct: 63 LHAQAKEHNLTVNLTTFRVWCYACEKEVFLDQRLAVHTQSPSDSPLPAHPLKAVPIAVAD 122
Query: 182 ------NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP-L 233
D L+ G+ N+ + ++N +Q+L PL FFL R K P L
Sbjct: 123 EGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL 182
Query: 234 VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD 293
+ L ++WH + V P + K FR Q + EF+ L++ LH +
Sbjct: 183 CKSYQKLVSEVWHKKR-PSYVVPSSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHEE 240
Query: 294 LR 295
L+
Sbjct: 241 LK 242
>gi|118359579|ref|XP_001013029.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89294796|gb|EAR92784.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 528
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTRK 243
VGL N+ T F+N +Q L + PL ++ L +N + ++P+ + F +L R+
Sbjct: 167 VGLINLGNTCFMNSALQCLSNLQPLTDYCLQNKEDNEINIQNPMGSGGVVIKAFANLVRQ 226
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
IW+ + + VSP EFL+ V+ K + G Q + EF+ +LL+ +H DL +K
Sbjct: 227 IWNQK--EDSVSPDEFLR-VISYFNKIYSSGRQQDSQEFLLYLLDQIHEDLNRVEK 279
>gi|224073512|ref|XP_002198543.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Taeniopygia
guttata]
Length = 911
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 94/248 (37%), Gaps = 54/248 (21%)
Query: 100 EVRRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAY 153
+ R CP+LD+ V R L + C S + N++ACL G Y G G+ H+
Sbjct: 3 DTRDICPHLDSIGEVTRDDLLLKSKGTCQSCGAAGPNLWACLQIGCPYVGCGESFADHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCL-------------------------PDG---------- 178
H+ H++ +NL T +V+C PD
Sbjct: 63 LHAQAKKHNLTVNLTTFRVWCYACEKEVFLEQRLAAQPPSPPSKFPEPDSPLPAHPLKAV 122
Query: 179 ---------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRH 228
E D L+ G+ N+ + ++N +Q+L PL FFL R
Sbjct: 123 PIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRT 182
Query: 229 CKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
K P L + L ++WH + V P + K FR Q + EF+ L+
Sbjct: 183 DKKPALCKSYQKLVSEVWHKKR-PSYVVPSSLSHGI-KLVNPMFRGYAQQDTQEFLRCLM 240
Query: 288 NTLHSDLR 295
+ LH +L+
Sbjct: 241 DQLHEELK 248
>gi|126335815|ref|XP_001367983.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Monodelphis domestica]
Length = 920
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL +N K + + +L ++
Sbjct: 254 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQ 313
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W RN QV+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 314 MWSGRN--TQVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 370
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G +L V KE +N ND G + E S++ PF L
Sbjct: 371 ELKDANGRPDLVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECSKISVTFDPFCYLT 430
Query: 357 LDLP 360
L LP
Sbjct: 431 LPLP 434
>gi|338714892|ref|XP_003363165.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Equus caballus]
Length = 916
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 432 L---PLPLKKDRVMEVFLVP 448
>gi|403358774|gb|EJY79042.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 847
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTRK 243
GL N+ T F+N +Q L V PL +FF+ + + + +P+ R+ +L +
Sbjct: 223 TGLYNMGNTCFLNTAVQCLSSVQPLTDFFIGNLHKKLLNTTNPMGTGGDVTLRYANLIKD 282
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW + K + P +FL+ + K + G Q + EF++++L++LH DL K T++
Sbjct: 283 IWQGKEEK--IYPAQFLKTLSKHA-PHLVCGQQQDAQEFLAYILDSLHEDLNRADKLTNM 339
>gi|157427794|ref|NP_001098803.1| ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
gi|281312476|sp|A7Z056.1|UBP20_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|157279133|gb|AAI53255.1| USP20 protein [Bos taurus]
gi|296482025|tpg|DAA24140.1| TPA: ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
Length = 912
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 95/250 (38%), Gaps = 54/250 (21%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L + C S +S N++ACL Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEDLLLKSKSTCQSCGVSGPNLWACLQVSCSYVGCGESFADHSTLHAQA 67
Query: 159 AGHHVYINLRTEKVYCL---------------PDG------------------------- 178
H++ +NL T +V+C P G
Sbjct: 68 KKHNLTVNLTTFRVWCYACEKEVFLEPRLAAHPPGPAPKFSEQDSPPPSHPLKAVPIAVA 127
Query: 179 ----YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP- 232
E D L+ G+ N+ + ++N +Q+L PL FFL R K P
Sbjct: 128 DEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA 187
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L + L ++WH R V P + K FR Q + EF+ L++ LH
Sbjct: 188 LCKSYQKLVSEVWH-RKRPSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHE 245
Query: 293 DLRNTKKNTS 302
+L+ T+
Sbjct: 246 ELKEPVVATA 255
>gi|332215940|ref|XP_003257099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Nomascus leucogenys]
Length = 916
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 ELKDASGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 432 L---PLPLKKDRVMEVFLVP 448
>gi|126335813|ref|XP_001367947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Monodelphis domestica]
Length = 965
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL +N K + + +L ++
Sbjct: 299 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQ 358
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W RN QV+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 359 MWSGRN--TQVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 415
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G +L V KE +N ND G + E S++ PF L
Sbjct: 416 ELKDANGRPDLVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECSKISVTFDPFCYLT 475
Query: 357 LDLP 360
L LP
Sbjct: 476 LPLP 479
>gi|158966727|ref|NP_957281.2| ubiquitin carboxyl-terminal hydrolase 20 [Danio rerio]
gi|148725228|emb|CAN88088.1| ubiquitin specific protease 20 [Danio rerio]
gi|148725501|emb|CAN88765.1| ubiquitin specific protease 20 [Danio rerio]
Length = 913
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 100/265 (37%), Gaps = 63/265 (23%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L + C S + N++ACL C Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEELIQKSKGTCQSCGVGGPNLWACLQCDCPYVGCGESYSDHSTIHAQA 67
Query: 159 AGHHVYINLRTEKVYCLPDGYEI--------------------NDPSLEDIRH------- 191
H++ +NL T +V+C E+ DP L+ +
Sbjct: 68 KKHNLTVNLTTFRVWCYVCEREVFLEPKPVTPVSSAHRCKPHDQDPVLQTTCYPLKAVPI 127
Query: 192 --------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCK 230
G+ NI + ++N +Q+L PL FF R K
Sbjct: 128 AVADEEGSESEEDELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFQDCSGLVRTDK 187
Query: 231 SP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
P L + L ++WH + V P + K FR Q + EF+ L++
Sbjct: 188 KPALCKSYQKLISELWHKKR-PSYVVPTTLFHGI-KLVNPMFRGYAQQDTQEFLRCLMDQ 245
Query: 290 LHSDLRNTKKNTSIIYECFQGELEV 314
LH +L+ +++C G EV
Sbjct: 246 LHEELKEP------LFDCSGGISEV 264
>gi|410951167|ref|XP_003982271.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Felis
catus]
Length = 917
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 432 L---PLPLKKDRVMEVFLVP 448
>gi|326432136|gb|EGD77706.1| hypothetical protein PTSG_08799 [Salpingoeca sp. ATCC 50818]
Length = 1085
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 188 DIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGDL 240
+ R VGL N T ++N IQ+L+ P+++FFL + + P LV +F L
Sbjct: 271 EARMVGLLNHGNTCYMNSAIQALLHCLPIQDFFLTCDGHVQQSQPRGGDRTTLVQQFRHL 330
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL---------- 290
+I A+ ++P EF++ V ++S F+ Q + VEF+ + L+ L
Sbjct: 331 VHRIAFAKG--AYIAPSEFVRHV-RSSNLLFQGYGQQDTVEFLRYALDKLDEELSLPVDE 387
Query: 291 HSDLRNTK-KNTSIIYECFQGELE 313
S L NTK K S+I F G +E
Sbjct: 388 SSTLGNTKAKKKSVISSVFSGTVE 411
>gi|410951165|ref|XP_003982270.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Felis
catus]
Length = 964
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|348581460|ref|XP_003476495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cavia
porcellus]
Length = 932
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 270 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 329
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 330 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 386
Query: 304 IYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ + G +VV KE +N ND G + E +++ PF L
Sbjct: 387 LPKDANGRPDVVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 446
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VM+ ++P
Sbjct: 447 L---PLPLKKDRVMDVFLVP 463
>gi|355728062|gb|AES09403.1| ubiquitin specific peptidase 4 [Mustela putorius furo]
Length = 684
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 23 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 82
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 83 MWSGRD--SHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 139
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 140 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 199
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 200 L---PLPLKKDRVMEVFLVP 216
>gi|47208151|emb|CAF93184.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1677
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 25/149 (16%)
Query: 154 THSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRV 213
TH+L A + + +KV CLP G+ GL N+ T F+N IQSL
Sbjct: 700 THALPASKEPHEDEEEKKV-CLP-GF------------TGLVNLGNTCFMNSVIQSLSNT 745
Query: 214 TPLRNFFL--IPENYRHCKSP------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMK 265
LR++FL E +C +P L F L R +W + Q S L+A++
Sbjct: 746 RELRDYFLDRAFEGEINCSNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVA 802
Query: 266 ASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+ +F Q + EFM++LL+ LH DL
Sbjct: 803 SKASQFTGYAQHDAQEFMAFLLDGLHEDL 831
>gi|342187290|ref|NP_001230117.1| ubiquitin specific peptidase 4 (proto-oncogene) [Sus scrofa]
Length = 963
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKISVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEIFLVP 495
>gi|432092405|gb|ELK25020.1| Ubiquitin carboxyl-terminal hydrolase 4 [Myotis davidii]
Length = 901
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 239 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLRDEYEAEINRDNPLGMKGEIAEAYAELIKQ 298
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 299 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 355
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 356 ELQDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 415
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 416 L---PLPLKKDRVMEVFLVP 432
>gi|426330112|ref|XP_004026068.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Gorilla gorilla gorilla]
Length = 1058
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 93/248 (37%), Gaps = 53/248 (21%)
Query: 97 RLVEVRRDCPYLDTVNRQVLDFDFEKF------CSVSLSNLNVYACL--VCGKYYQGRGQ 148
++ R CP+LD+V + +K C V NL +ACL C G Q
Sbjct: 152 KMSAFRNHCPHLDSVGEITKEDLIQKSHGTCQDCKVQGPNL--WACLENRCSYVGCGESQ 209
Query: 149 KSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI-------NDPSLEDIRH---------- 191
H+ HS E H++ +NL T +V+C E+ PSL +R
Sbjct: 210 VDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQ 269
Query: 192 ---VGLNNIKETDFVNV-------------------TIQSLMRVTPLRNFFLIPENY-RH 228
+ N +T V V I PL FFL R
Sbjct: 270 DFKIPSNTTLKTPLVAVFDDLDIEADEEDELRARGKLILCNASFPPLTQFFLDCGGLART 329
Query: 229 CKSPLVHR-FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
K P + + + L ++WH ++ G V P Q + K FR Q + EF+ L+
Sbjct: 330 DKKPAICKSYLKLMTELWH-KSRPGSVVPTTLFQGI-KTVNPTFRGYSQQDAQEFLRCLM 387
Query: 288 NTLHSDLR 295
+ LH +L+
Sbjct: 388 DLLHEELK 395
>gi|326508908|dbj|BAJ86847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 762
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGD 239
+++DP+ E I GL N+ T F++ +Q+L+ L ++FL +N + L+ +F D
Sbjct: 130 DLSDPTAE-IGVCGLRNLGNTCFMSAGLQALLSTENLVSYFLSFDN-DGSEETLIGQFSD 187
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
L ++ WH + ++PH+F + V+ +FR Q + EF++ LL++L+ +L
Sbjct: 188 LAKRFWHGQ--YSVINPHQF-KYVLGKRYAQFRDCSQHDCQEFLALLLDSLNDEL 239
>gi|194221320|ref|XP_001498012.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Equus
caballus]
Length = 963
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|426249551|ref|XP_004018513.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Ovis
aries]
Length = 916
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 432 L---PLPLKKDRVMEIFLVP 448
>gi|440893726|gb|ELR46396.1| Ubiquitin carboxyl-terminal hydrolase 4 [Bos grunniens mutus]
Length = 963
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEIFLVP 495
>gi|332215938|ref|XP_003257098.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Nomascus leucogenys]
Length = 963
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDASGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|114586840|ref|XP_001163407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 7 [Pan
troglodytes]
gi|397495143|ref|XP_003818420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Pan
paniscus]
gi|410227906|gb|JAA11172.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259862|gb|JAA17897.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289714|gb|JAA23457.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353789|gb|JAA43498.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 915
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 432 L---PLPLKKDRVMEVFLVP 448
>gi|297285790|ref|XP_002802844.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Macaca
mulatta]
Length = 935
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 274 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 333
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 334 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 390
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 391 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 450
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 451 L---PLPLKKDRVMEVFLVP 467
>gi|255555787|ref|XP_002518929.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223541916|gb|EEF43462.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 938
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L+ PL ++FL EN L FGDL RK+
Sbjct: 326 AGLQNMGNTCFMNSALQCLVHTPPLVDYFLKDYSDEINAENPLGMHGELALAFGDLLRKL 385
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + + +P F + + +F Q + E +++LL+ LH DL K+ I
Sbjct: 386 WSSG--RTTFAPRVF-KGKLALFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 442
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ + G + EV E +N + ND G + S++ PF+ L L
Sbjct: 443 MKDWGGRPDEEVADECWRNHKARNDSVIVDVCQGQYKSTLVCPVCSKISITFDPFMYLSL 502
Query: 358 DLP 360
LP
Sbjct: 503 PLP 505
>gi|154152175|ref|NP_001093789.1| ubiquitin carboxyl-terminal hydrolase 4 [Bos taurus]
gi|158513811|sp|A6QR55.1|UBP4_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|151554732|gb|AAI50121.1| USP4 protein [Bos taurus]
gi|296474786|tpg|DAA16901.1| TPA: ubiquitin specific protease 4 [Bos taurus]
Length = 963
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEIFLVP 495
>gi|383409703|gb|AFH28065.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
gi|384942172|gb|AFI34691.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
Length = 916
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 432 L---PLPLKKDRVMEVFLVP 448
>gi|402860133|ref|XP_003894489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Papio anubis]
Length = 921
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 260 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 319
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 320 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 376
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 377 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 436
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 437 L---PLPLKKDRVMEVFLVP 453
>gi|296191006|ref|XP_002743440.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Callithrix
jacchus]
Length = 1058
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 102/263 (38%), Gaps = 54/263 (20%)
Query: 96 SRLVEVRRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK-- 149
+R+ + R CP+LD+ V ++ L + C S ++ N++ACL Y G G+
Sbjct: 142 ARMGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFA 201
Query: 150 SHAYTHSLEAGHHVYINLRTEKVYCLPDGYEI---------------------NDPSLED 188
H+ H+ H++ +NL T +++C E+ + P
Sbjct: 202 DHSTIHAQTKKHNLTVNLTTFRLWCYACEKEVFLEQRLVAPLPGSSSTFSEQDSPPPSHP 261
Query: 189 IRHV-----------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPE 224
++ V G+ N+ + ++N +Q+L PL FFL
Sbjct: 262 LKAVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGG 321
Query: 225 NYRHCKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
R K P L + L ++WH + V P + K FR Q + EF+
Sbjct: 322 LVRTDKKPALCKSYQKLVSEVWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFL 379
Query: 284 SWLLNTLHSDLRNTKKNTSIIYE 306
L++ LH +L+ T + E
Sbjct: 380 RCLMDQLHEELKEPAVATVTLME 402
>gi|114586836|ref|XP_001163445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 8 [Pan
troglodytes]
gi|397495141|ref|XP_003818419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Pan
paniscus]
gi|410227908|gb|JAA11173.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259864|gb|JAA17898.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289716|gb|JAA23458.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353791|gb|JAA43499.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 962
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|66820851|ref|XP_643982.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60472353|gb|EAL70306.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 919
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
GLNN+ T F+N +Q L PL NF + E+ R C++ F L ++ + G
Sbjct: 235 GLNNVGNTCFMNSVLQCLTYTVPLANFMMSREHSRQCQASGFCIFCSLETQVLQSHKCGG 294
Query: 253 Q-VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
+ ++P E + K + FRIG Q + EF+ +++ +L
Sbjct: 295 KSITPKEIASNIRKIA-PTFRIGRQEDSHEFIRFMIESLQ 333
>gi|355559641|gb|EHH16369.1| hypothetical protein EGK_11640 [Macaca mulatta]
gi|380788769|gb|AFE66260.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|383409701|gb|AFH28064.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|384942170|gb|AFI34690.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
Length = 963
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|345328594|ref|XP_001505377.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Ornithorhynchus
anatinus]
Length = 974
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L + PL +FL +N K + F L ++
Sbjct: 309 CGLGNLGNTCFMNSALQCLSNIAPLTEYFLNDKYEAEINRDNPLGMKGEIAEAFAQLIKQ 368
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W RN QV P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 369 MWSGRN--AQVVPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 425
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G +L V KE N ND G + + S++ PF L
Sbjct: 426 ELQDANGRPDLVVAKEAWDNHRLRNDSVIVDTFHGLFKSTLVCPQCSKISVTFDPFCYLT 485
Query: 357 LDLP 360
L LP
Sbjct: 486 LPLP 489
>gi|426249549|ref|XP_004018512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Ovis
aries]
Length = 963
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEIFLVP 495
>gi|40795667|ref|NP_955475.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Homo sapiens]
gi|2656143|gb|AAC27356.1| UnpES [Homo sapiens]
gi|119585373|gb|EAW64969.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
gi|119585377|gb|EAW64973.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
Length = 916
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 432 L---PLPLKKDRVMEVFLVP 448
>gi|40795665|ref|NP_003354.2| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Homo sapiens]
gi|116242839|sp|Q13107.3|UBP4_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein homolog
gi|2656141|gb|AAC27355.1| UnpEL [Homo sapiens]
gi|115527981|gb|AAI25131.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
gi|119585375|gb|EAW64971.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|119585376|gb|EAW64972.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|158257022|dbj|BAF84484.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|312372464|gb|EFR20418.1| hypothetical protein AND_20136 [Anopheles darlingi]
Length = 1884
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N K LV R+ +L R
Sbjct: 849 TGLHNLGNTCFMNAALQVLFNTQPLTQYFIKRMHLYELNTANKMGTKGQLVLRYAELLRD 908
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A ++P + V K + + F G Q + E + WLL++LH DL
Sbjct: 909 VWTASTRS--IAPLKLRFCVTKHAPQ-FSGGGQHDSQELLDWLLDSLHEDL 956
>gi|62898145|dbj|BAD97012.1| ubiquitin specific protease, proto-oncogene isoform a variant [Homo
sapiens]
Length = 963
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|347965501|ref|XP_321947.5| AGAP001209-PA [Anopheles gambiae str. PEST]
gi|333470482|gb|EAA01803.6| AGAP001209-PA [Anopheles gambiae str. PEST]
Length = 1958
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N K LV R+ +L R
Sbjct: 813 TGLHNLGNTCFMNAALQVLFNTQPLTQYFIQKKHLYELNTSNKMGTKGQLVLRYAELLRD 872
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A ++P + V K + + F G Q + E + WLL++LH DL
Sbjct: 873 VWTAST--RSIAPLKLRFCVTKHAPQ-FSGGGQHDSQELLDWLLDSLHEDL 920
>gi|343961659|dbj|BAK62419.1| ubiquitin carboxyl-terminal hydrolase 4 [Pan troglodytes]
Length = 907
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 247 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 306
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 307 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 363
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 364 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 423
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 424 L---PLPLKKDRVMEVFLVP 440
>gi|2459395|gb|AAB72237.1| ubiquitin protease [Homo sapiens]
Length = 963
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPSMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|281338350|gb|EFB13934.1| hypothetical protein PANDA_009352 [Ailuropoda melanoleuca]
Length = 962
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 300 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 359
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 360 MWSGRD--SHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 416
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 417 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 476
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 477 L---PLPLKKDRVMEVFLVP 493
>gi|242034643|ref|XP_002464716.1| hypothetical protein SORBIDRAFT_01g025350 [Sorghum bicolor]
gi|241918570|gb|EER91714.1| hypothetical protein SORBIDRAFT_01g025350 [Sorghum bicolor]
Length = 935
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 177 DGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYR 227
DGY +D H GL+N+ T F+N IQSL+ PL +FL EN
Sbjct: 295 DGYNSLSNGTKDGTHGLSGLHNLGNTCFMNSAIQSLVHTPPLVQYFLEDYTCEINTENPL 354
Query: 228 HCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
+ L FG+L RK+W + + V+P F ++ + +F Q + E +++LL
Sbjct: 355 GLQGELAIAFGELLRKLWSSG--RTSVAPRAF-KSKLSRFAPQFSGYNQHDSQELLAFLL 411
Query: 288 NTLHSDLRNTKKNTSI 303
+ LH DL KK I
Sbjct: 412 DGLHEDLNRVKKKPYI 427
>gi|355746701|gb|EHH51315.1| hypothetical protein EGM_10667, partial [Macaca fascicularis]
Length = 889
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 228 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 287
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 288 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 344
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 345 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 404
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 405 L---PLPLKKDRVMEVFLVP 421
>gi|410036953|ref|XP_003950154.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Pan
troglodytes]
Length = 907
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 247 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 306
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 307 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 363
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 364 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 423
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 424 L---PLPLKKDRVMEVFLVP 440
>gi|301770377|ref|XP_002920614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Ailuropoda
melanoleuca]
Length = 1000
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 338 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 397
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 398 MWSGRD--SHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 454
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 455 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 514
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 515 L---PLPLKKDRVMEVFLVP 531
>gi|301616377|ref|XP_002937632.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Xenopus
(Silurana) tropicalis]
Length = 809
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 22/178 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL N+ T F+N T+Q L PL N+ L E+ R+C+ + + N
Sbjct: 120 AGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHSRNCQQSGFCMLCIMQNHLIQVFANS 179
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
V P F++ + K + + FR G Q + EF+ + ++ + ++ L + TS+
Sbjct: 180 GNNVKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLNGYARLDRHSQATSL 238
Query: 304 IYECFQGEL--EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+++ F G L V + KN SD D + +I E +P ++ L++
Sbjct: 239 VHQIFGGYLRSRVTCSVCKNV-----------SDTYDPYLDIALEIRNVPNIVCALEM 285
>gi|357111554|ref|XP_003557577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Brachypodium distachyon]
Length = 882
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 19/197 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +IQ L T L ++FL N L FG+L R +
Sbjct: 247 IGLENLGNTCFMNSSIQCLAHTTKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRSL 306
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W N + QV+PH F +A + +F Q + E +++LL+ LH DL + K
Sbjct: 307 W--TNDRKQVAPHHF-KAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNHVKCKPYEE 363
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + EV E N ++ ND G S+ PF+ L
Sbjct: 364 AKDASGRPDEEVADEYWSNHLARNDSVIVDTCHGQYKSTLTCPTCSKTSVTFDPFMYLS- 422
Query: 358 DLPPPPLFKDVMEKNII 374
LP P + K M +
Sbjct: 423 -LPVPSMAKRAMTVTVF 438
>gi|449478963|ref|XP_002195337.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43-like
[Taeniopygia guttata]
Length = 791
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-NYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N T F+N +Q L PL + R ++ + R L R +W R +
Sbjct: 260 GLRNHGNTCFMNAVVQCLSNTAPLAERLALGRYRARGARAEVTQRLAALVRALW-TRQYT 318
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
Q+S EF V K S + FR Q + +EF+ WLL+ +H DL
Sbjct: 319 PQLS-AEFKNIVSKHSSQ-FRGNAQHDALEFLLWLLDRMHEDL 359
>gi|350579707|ref|XP_001929239.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Sus
scrofa]
Length = 914
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 55/255 (21%)
Query: 102 RRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
R CP+LD+ V ++ L + C S ++ N++ACL Y G G+ H+ H
Sbjct: 5 RDPCPHLDSIGEVTKEDLLLKSKGTCQSCGVAGPNLWACLQVSCSYVGCGESFADHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYCL---------------PDG---------------------- 178
+ H++ +NL T +V+C P G
Sbjct: 65 AQVKTHNLTVNLTTFRVWCYACEKEVFLEQRLAAHPPGPSPKFSEQDSPPPPCHPLKAVP 124
Query: 179 --------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHC 229
E D L+ G+ N+ + ++N +Q+L PL FFL R
Sbjct: 125 IAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTD 184
Query: 230 KSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
K P L + L ++WH R V P + K FR Q + EF+ L++
Sbjct: 185 KKPALCKSYQKLVTEVWH-RKRPSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMD 242
Query: 289 TLHSDLRNTKKNTSI 303
LH +L+ + ++
Sbjct: 243 QLHEELKEPRVAAAL 257
>gi|351711884|gb|EHB14803.1| Ubiquitin carboxyl-terminal hydrolase 4 [Heterocephalus glaber]
Length = 964
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 362 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ + G + V KE +N ND G + E +++ PF L
Sbjct: 419 LPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|326930344|ref|XP_003211307.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Meleagris
gallopavo]
Length = 906
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 93/248 (37%), Gaps = 54/248 (21%)
Query: 100 EVRRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAY 153
+ R CP+LD+ V R L + C S N++ACL G Y G G+ H+
Sbjct: 3 DTRDICPHLDSIGEVTRDDLLLKSKGTCQSCGAVGPNLWACLQIGCPYVGCGESYADHST 62
Query: 154 THSLEAGHHVYINLRTEKVYCL-------------------------PDG---------- 178
H+ H++ +NL T +V+C PD
Sbjct: 63 LHAQAKKHNLTVNLTTFRVWCYACEKEVFLDQRLAAHTQSPSVKFSEPDSPLPAHPLKAV 122
Query: 179 ---------YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRH 228
E D L+ G+ N+ + ++N +Q+L PL FFL R
Sbjct: 123 PIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRT 182
Query: 229 CKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
K P L + L ++WH + V P + K FR Q + EF+ L+
Sbjct: 183 DKKPALCKSYQKLVSEVWHKKR-PSYVVPSSLSHGI-KLVNPMFRGYAQQDTQEFLRCLM 240
Query: 288 NTLHSDLR 295
+ LH +L+
Sbjct: 241 DQLHEELK 248
>gi|449016365|dbj|BAM79767.1| ubiquitin-specific protease UBP15 [Cyanidioschyzon merolae strain
10D]
Length = 814
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH---------CKSPLVHRFGDLTR 242
VGL+N+ T F+N IQ L PL FFL E YR L F L R
Sbjct: 229 VGLSNLGNTCFMNSAIQCLASTVPLAEFFLSGE-YRKDLNRSNPLGTGGVLAEEFAALVR 287
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
++W +G V+P F V + + + G Q + E++++LL+ LH DL ++
Sbjct: 288 QLWSTS--QGTVAPRRFKYQVSRYAPQFSGYG-QHDAQEWITFLLDGLHEDLNRVRRKPY 344
Query: 303 I 303
I
Sbjct: 345 I 345
>gi|296225191|ref|XP_002758385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Callithrix jacchus]
Length = 963
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 178 GYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYR 227
Y +P+ I+ GL N+ T F+N +Q L PL ++FL E N
Sbjct: 286 SYNCQEPASSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRINPL 345
Query: 228 HCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
K + + +L +++W R+ V+P F V + + + F Q + E +++LL
Sbjct: 346 GMKGEIAEAYAELIKQMWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLL 402
Query: 288 NTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITT 345
+ LH DL KK + + G + V KE +N ND G +
Sbjct: 403 DGLHEDLNRVKKKPYLELKDANGRPDSVVAKEAWENHKLRNDSVIVDTFHGLFKSTLVCP 462
Query: 346 ETSRM-----PFLMLGLDLPPPPLFKD-VMEKNIIP 375
E ++ PF L L P PL KD VME ++P
Sbjct: 463 ECFKVSVTFDPFCYLTL---PLPLKKDRVMEVFLVP 495
>gi|255730030|ref|XP_002549940.1| hypothetical protein CTRG_04237 [Candida tropicalis MYA-3404]
gi|240133009|gb|EER32566.1| hypothetical protein CTRG_04237 [Candida tropicalis MYA-3404]
Length = 1324
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTR 242
H+GLNN+ T ++N +Q L+ V + +F I + + +PL + FG L +
Sbjct: 315 HLGLNNLGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNTDNPLGYHGDVANAFGSLLK 374
Query: 243 KIW-HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
+ + HA+N ++P EF + + S F +Q + E +SWLL+ LH DL ++
Sbjct: 375 QAFDHAKN-SSSIAPREFKSTIGRYS-SMFSGYLQQDSQELLSWLLDALHEDLNRIQQ 430
>gi|426340532|ref|XP_004034183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Gorilla gorilla gorilla]
Length = 633
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|344300518|gb|EGW30839.1| hypothetical protein SPAPADRAFT_52038 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1287
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH---CKSPL------VHRFGDLT 241
H+GL+N+ T ++N +Q L+ V P NF+ Y+ +PL + FG L
Sbjct: 336 HLGLSNLGNTCYMNSALQCLLHV-PEINFYFYYNIYKQELNVNNPLGYHGNVANSFGSLL 394
Query: 242 RKIWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
++ + R + G +SP +F + + S F +Q + EF+SWLL+ LH DL
Sbjct: 395 KQAFDKRGSGSGSISPRDFKSTIGRYSS-MFSGYLQQDSQEFLSWLLDALHEDL 447
>gi|42562472|ref|NP_174562.2| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Arabidopsis
thaliana]
gi|166201360|sp|Q9MAQ3.2|UBP11_ARATH RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 11;
AltName: Full=Deubiquitinating enzyme 11; Short=AtUBP11;
AltName: Full=Ubiquitin thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|332193411|gb|AEE31532.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Arabidopsis
thaliana]
Length = 892
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSPLVHR------FGDLTRK 243
GL N+ T F+N T+Q L P+ +FL ++YR + K+PL R FG+L RK
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFL--QDYRSDINAKNPLGMRGELAIAFGELLRK 359
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W + + V+P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 360 LWSSG--QNTVAPRAFKTKLARFAPQ-FSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYI 416
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + EV +E K + ND G + + ++ PF+ L
Sbjct: 417 EAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLS 476
Query: 357 LDLP 360
L LP
Sbjct: 477 LPLP 480
>gi|428180637|gb|EKX49504.1| hypothetical protein GUITHDRAFT_47981, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY------RHCKSPLVHRFGDLTRKIW 245
VGL N+ T F+N IQ L V P R+FFL + + L FG+L KIW
Sbjct: 3 VGLQNLGNTCFLNACIQCLAAVPPFRDFFLSNHHIFRLDTGSSMRGTLALSFGELLHKIW 62
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT-----KKN 300
+ + L+ + +F Q + EF+ +LL+ LH DL+ + ++
Sbjct: 63 QGEPYSSVSA--AILKDRVSKFAPQFTGCRQHDSQEFLRFLLDGLHEDLKTSDNDEMRQF 120
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQ-NTEKGSDGGDDHDNITTET----SRM--PFL 353
+ Q + + +P + D + + GG I T SR PFL
Sbjct: 121 MEVRMAHDQVASKYNESMPAMEMYCLDNLSCVTAAFGGQLVSQIECRTCSHQSRCYDPFL 180
Query: 354 MLGLDLPPPPLFKDVMEKNIIPQ 376
+ L +P P FK+ E+ P+
Sbjct: 181 DISLPIPSPSQFKEGQEQAHRPR 203
>gi|403413657|emb|CCM00357.1| predicted protein [Fibroporia radiculosa]
Length = 1285
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
+GL N+ T F+N +Q L L ++FL P+N + + FG L ++
Sbjct: 377 LGLGNMGNTCFMNSALQCLAHTKELMDYFLTGVFEEELNPDNPLGMQGAIAQAFGALLQR 436
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
IW + SP EF QA+ + + + F Q + E +++LL+ LH DL K
Sbjct: 437 IWATGSSSTSYSPREFKQALQRFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNRVLK 491
>gi|6910582|gb|AAF31287.1|AC006424_16 CDS [Arabidopsis thaliana]
Length = 887
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR---HCKSPLVHR------FGDLTRK 243
GL N+ T F+N T+Q L P+ +FL ++YR + K+PL R FG+L RK
Sbjct: 297 GLQNLGNTCFMNSTLQCLAHTPPIVEYFL--QDYRSDINAKNPLGMRGELAIAFGELLRK 354
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W + + V+P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 355 LWSSG--QNTVAPRAFKTKLARFAPQ-FSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYI 411
>gi|395856541|ref|XP_003800686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Otolemur
garnettii]
Length = 936
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|242020942|ref|XP_002430906.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212516124|gb|EEB18168.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 945
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 33/193 (17%)
Query: 132 NVYACLV--CGKYYQGRGQKSHAYTH-SLEAGHHVYINLRTEKVYCL------------P 176
N++ CL CG+ G + H+ H H+++ NL + +++C P
Sbjct: 39 NLWLCLEKDCGRVLCGDAESDHSTFHFKTNKTHYIHQNLSSLRLWCYLCKTEAFLGSQTP 98
Query: 177 DGY----------EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----I 222
+ E + + D + GL NI T ++N +Q+L TPL +FL +
Sbjct: 99 NAVRTWSEDYSDSETKETFVNDKKPKGLQNIGNTCYMNAALQALCNTTPLSQYFLQCLVL 158
Query: 223 PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEF 282
N K L F L +++W RN G + P L + + FR Q + EF
Sbjct: 159 ASNQE--KLTLSKNFQRLNKEMWQ-RNSPGCIVPSGILYGI-RNIHPMFRGYQQHDTQEF 214
Query: 283 MSWLLNTLHSDLR 295
+ ++ LH +L+
Sbjct: 215 LRCFMDQLHEELK 227
>gi|321478478|gb|EFX89435.1| hypothetical protein DAPPUDRAFT_310510 [Daphnia pulex]
Length = 936
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 79/207 (38%), Gaps = 60/207 (28%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTR 242
+ GL N+ T ++N +Q+L TPL+N+FL +N L F + R
Sbjct: 236 YTGLGNLGNTCYMNAVLQALANTTPLKNYFLDKKFQADINRDNPLGFGGSLAIAFAIILR 295
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK---- 298
++W + + + P L++++ +F Q + EFM++LL+ LH DL K
Sbjct: 296 QLWSGQ--RDSIEPSH-LKSLLANRASQFSGYAQHDAQEFMAFLLDGLHEDLNRVKTKPL 352
Query: 299 ------------------------KNTSIIYECFQGELEVVKEIPKNTISGNDQNTEKGS 334
+N S+I + FQG+ + P QN
Sbjct: 353 TTPVESNGRPDHIVADEAWQVYKMRNDSVIDDLFQGQFKSTLVCPAC------QNISVTF 406
Query: 335 DGGDDHDNITTETSRMPFLMLGLDLPP 361
D PFL L L LPP
Sbjct: 407 D---------------PFLYLALPLPP 418
>gi|449547942|gb|EMD38909.1| hypothetical protein CERSUDRAFT_104201 [Ceriporiopsis subvermispora
B]
Length = 1264
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 19/187 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTRK 243
+GL N+ T F+N +Q L L ++FL + E+ + +PL FG L R+
Sbjct: 414 LGLGNMGNTCFMNSALQCLAHTQELTDYFLMGVFEDELNFDNPLGMHGQIAQAFGALLRR 473
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW + SP EF QA+ + + + F Q + E +++LL+ LH DL K I
Sbjct: 474 IWAPNSSATSYSPREFKQALQRFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNRILKKPYI 532
Query: 304 IYECFQGE-----LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFL 353
++G ++ E + + ND G + E S++ PF+
Sbjct: 533 EKPDWEGGDDRDLAKLANESWQGYLRRNDSVIVDLFQGQYQSTLVCPECSKVSITFDPFM 592
Query: 354 MLGLDLP 360
L L LP
Sbjct: 593 YLTLPLP 599
>gi|344275822|ref|XP_003409710.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Loxodonta africana]
Length = 914
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 432 L---PLPLKKDRIMEVFLVP 448
>gi|344275820|ref|XP_003409709.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Loxodonta africana]
Length = 961
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 479 L---PLPLKKDRIMEVFLVP 495
>gi|414868202|tpg|DAA46759.1| TPA: hypothetical protein ZEAMMB73_550567 [Zea mays]
Length = 525
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 177 DGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYR 227
DGY +D H GL+N+ T F+N IQSL+ PL +FL EN
Sbjct: 295 DGYNSLSNGTKDDTHGLSGLHNLGNTCFMNSAIQSLVHTPPLVQYFLEDYTCEINKENPL 354
Query: 228 HCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
+ L FG+L RK+W + + ++P F ++ + +F Q + E +++LL
Sbjct: 355 GLQGELAIAFGELLRKLWSSG--RTSIAPRAF-KSKLSRFAPQFSGYNQHDSQELLAFLL 411
Query: 288 NTLHSDLRNTKKNTSI 303
+ LH DL K+ I
Sbjct: 412 DGLHEDLNRVKEKPYI 427
>gi|308510440|ref|XP_003117403.1| hypothetical protein CRE_02121 [Caenorhabditis remanei]
gi|308242317|gb|EFO86269.1| hypothetical protein CRE_02121 [Caenorhabditis remanei]
Length = 1140
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPE-NYRHCKSPLVHRFGDLTR 242
H GL NI T F+N +Q L+ LR FFL I E N + L F D
Sbjct: 423 HTGLRNIGNTCFMNAILQMLVNNIELREFFLRDHYQSEINESNPLGSEGRLARAFADFMH 482
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-- 300
++W R+ + P + ++ ++ +F Q + EF+S+LL+ LH D+ KK
Sbjct: 483 QMWSGRH--KAIEPIQ-IKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPL 539
Query: 301 TSIIYECFQGELEVVKEIPKNTISGND 327
T + + +L+V E KN I ND
Sbjct: 540 TGTVESHGRHDLDVSNEAWKNHILRND 566
>gi|194225927|ref|XP_001917278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Equus
caballus]
Length = 897
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 93/243 (38%), Gaps = 54/243 (22%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L + C S ++ N++ACL Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEDLLLKSKGTCQSCGVAGPNLWACLQVACPYVGCGESFADHSTIHAQV 67
Query: 159 AGHHVYINLRTEKVYCL---------------PDG------------------------- 178
H++ +NL T +V+C P G
Sbjct: 68 KKHNLTVNLTTFRVWCYACEREVFLEQRLAAHPPGPSPKFSEQDAPLPSHPLKAVPIAVA 127
Query: 179 ----YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSP- 232
E D L+ G+ N+ + ++N +Q+L PL FFL R K P
Sbjct: 128 DEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA 187
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
L + L ++WH R V P + K FR Q + EF+ L++ LH
Sbjct: 188 LCKSYQKLVSEVWH-RKRPSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQLHE 245
Query: 293 DLR 295
+L+
Sbjct: 246 ELK 248
>gi|414877602|tpg|DAA54733.1| TPA: hypothetical protein ZEAMMB73_341521 [Zea mays]
Length = 888
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
GL+N+ T F+N +Q L + L ++FL P N K L + FGDL RK+
Sbjct: 274 TGLDNLGNTCFMNSAVQCLAHTSKLVDYFLGDFHKEVNPHNPLGMKGELAYAFGDLLRKL 333
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
W + V+P +F +A + +F Q + E +++LL+ LH DL K
Sbjct: 334 WAID--RTPVAPRQF-KARLGRFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVK 384
>gi|326500890|dbj|BAJ95111.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 722
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
+GL+N+ T F+N +Q L + L +FFL N K L + FGDL RK+
Sbjct: 158 IGLDNLGNTCFMNSAVQCLAHTSKLVDFFLGDYQKEINTHNPLGMKGELAYSFGDLVRKL 217
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
W SP +F +A + +F Q + E +++LL+ LH DL K
Sbjct: 218 WAIDG--TSFSPRQF-KARLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVK 268
>gi|224117792|ref|XP_002317669.1| predicted protein [Populus trichocarpa]
gi|222860734|gb|EEE98281.1| predicted protein [Populus trichocarpa]
Length = 942
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L+ L +FL +N L FGDL RK+
Sbjct: 328 AGLQNMGNTCFMNSALQCLLHTPQLVEYFLQDYSEEINTQNPLGMHGELALAFGDLLRKL 387
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + + ++P F + + +F Q + E +++LL+ LH DL K+ I
Sbjct: 388 WSSG--RTAIAPRVF-KGKLALFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 444
Query: 305 YECFQGE--LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ + GE EV E +N + ND G + S++ PF+ L L
Sbjct: 445 MKDWSGEPDEEVADECWRNHKTRNDSVIVDVCQGQYKSTLVCPICSKISITFDPFMYLSL 504
Query: 358 DLP 360
LP
Sbjct: 505 PLP 507
>gi|417405449|gb|JAA49435.1| Putative ubiquitin carboxyl-terminal hydrolase 4 [Desmodus
rotundus]
Length = 963
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLRDEYEAEINRDNPLGMKGEIAETYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AYVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL +D VME ++P
Sbjct: 479 L---PLPLKRDRVMEVFLVP 495
>gi|170050063|ref|XP_001870989.1| ubiquitin specific protease [Culex quinquefasciatus]
gi|167871652|gb|EDS35035.1| ubiquitin specific protease [Culex quinquefasciatus]
Length = 1755
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N K L R+ +L R+
Sbjct: 699 TGLHNLGNTCFMNAALQVLFNTQPLAQYFAKRMHLYELNVNNKLGTKGQLAMRYAELLRE 758
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A + ++P + V K + + F G Q + E + WLL++LH DL
Sbjct: 759 VWTAS--QRSIAPLKLRFCVTKHAPQ-FSGGGQHDSQELLDWLLDSLHEDL 806
>gi|444510625|gb|ELV09647.1| Ubiquitin carboxyl-terminal hydrolase 4 [Tupaia chinensis]
Length = 898
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 175 LPDGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-------- 224
P Y +P I+ GL N+ T F+N +Q L PL ++FL E
Sbjct: 214 FPASYNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRD 273
Query: 225 NYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
N K + + +L R++W R + V+P F V + + + F Q + E ++
Sbjct: 274 NPLGMKGEIAEAYAELIRQMWSGR--EAHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLA 330
Query: 285 WLLNTLHSDLRNTKK 299
+LL+ LH DL KK
Sbjct: 331 FLLDGLHEDLNRVKK 345
>gi|326529625|dbj|BAK04759.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 884
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 19/197 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +IQ L T L ++FL N L FG+L R +
Sbjct: 248 IGLENLGNTCFMNSSIQCLAHTTKLVDYFLGDYDSDINQTNPLGLNGELALTFGELLRSL 307
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W N + V+PH F +A + +F Q + E +++LL+ LH DL K
Sbjct: 308 W--TNDRNTVAPHNF-KAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKYKPYEE 364
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + EV E +N ++ ND G S+ PF+ L
Sbjct: 365 AKDASGRPDEEVADEYWRNHLARNDSVIVDTCHGQYKSTLTCPTCSKTSVTFDPFMYLS- 423
Query: 358 DLPPPPLFKDVMEKNII 374
LP P + K M +
Sbjct: 424 -LPVPSMAKRTMTVTVF 439
>gi|157125302|ref|XP_001654280.1| ubiquitin specific protease [Aedes aegypti]
gi|108873655|gb|EAT37880.1| AAEL010184-PA [Aedes aegypti]
Length = 1801
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N K L R+ +L R+
Sbjct: 753 TGLHNLGNTCFMNAALQVLFNTQPLTQYFIRQMHMYELNMANKLGTKGQLAMRYAELLRE 812
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A + ++P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 813 VWTAS--QRSIAPLKLRFCVTKHAPQ-FSGGGQHDSQELLDWLLDALHEDL 860
>gi|392565614|gb|EIW58791.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1313
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
+GL N+ T F+N IQ L T L ++FL P+N + FG L +
Sbjct: 403 LGLGNMGNTCFMNSAIQCLAHNTELVDYFLTGVYQEELNPDNPLGMHGAVAQAFGALMSR 462
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW + +P EF Q + + + + F Q + E +++LL+ LH DL K +
Sbjct: 463 IWDPESTMSSYTPREFKQTLQRFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYV 521
Query: 304 IYECFQ--GELEVVKEIPKNTISG----NDQNTEKGSDGGDDHDNITTETSRM-----PF 352
++ G+ E+V E+ + G ND G + E S++ PF
Sbjct: 522 EKPDWEGGGDKELV-ELANTSWEGYMKRNDSVVVDLFQGQYQSTLVCPECSKVSITFDPF 580
Query: 353 LMLGLDLP 360
+ L L LP
Sbjct: 581 MYLTLPLP 588
>gi|403291354|ref|XP_003936760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Saimiri
boliviensis boliviensis]
Length = 941
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 280 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRINPLGMKGEIAEAYAELIKQ 339
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 340 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 396
Query: 304 IYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E ++ PF L
Sbjct: 397 ELKDANGRPDSVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECFKVSVTFDPFCYLT 456
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 457 L---PLPLKKDRVMEVFLVP 473
>gi|348507904|ref|XP_003441495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Oreochromis niloticus]
Length = 997
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L +PL +FL EN + + + DL ++
Sbjct: 316 CGLSNLGNTCFMNSALQCLSNASPLTEYFLTDQYEAEINRENPLGMRGEIAEAYADLVKQ 375
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W +R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 376 MWLSRS--SYVAPRTFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 432
Query: 304 IYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+G + V KE N ND G + E S++ PF L
Sbjct: 433 ALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLT 492
Query: 357 LDLP 360
L LP
Sbjct: 493 LPLP 496
>gi|395506252|ref|XP_003757449.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Sarcophilus harrisii]
Length = 908
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 91/246 (36%), Gaps = 54/246 (21%)
Query: 102 RRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
R CP+LD+ V ++ L + C S N++ACL Y G G+ H+ H
Sbjct: 5 REFCPHLDSIGEVTKEDLLLKSKGTCQSCGAGGPNLWACLQVACPYVGCGESFADHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEI---------------------------------- 181
+ H++ +NL T +V+C E+
Sbjct: 65 AQAKKHNLTVNLTTFRVWCYACEKEVFLDQRLAAPPPAPPSKFSEQETPLPSHPLKAVPI 124
Query: 182 ----------NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCK 230
D L+ GL N+ + ++N +Q+L PL FFL R K
Sbjct: 125 AVADEGESESEDDDLKPRGLTGLKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDK 184
Query: 231 SP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
P L + L ++WH + V P + K FR Q + EF+ L++
Sbjct: 185 KPALCKSYQKLVSEVWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQ 242
Query: 290 LHSDLR 295
LH +L+
Sbjct: 243 LHEELK 248
>gi|348572084|ref|XP_003471824.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Cavia porcellus]
Length = 378
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 41/197 (20%)
Query: 145 GRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRH-------VGLNNI 197
R + +HA HS G + + RTE LPD P+ ED GL N+
Sbjct: 4 SRARPAHAIAHSHAVGLYYALTERTE----LPDPL----PAREDPARPPNPPGVAGLRNL 55
Query: 198 KETDFVNVTIQSLMRVTPLRNFF----LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQ 253
T ++N +Q L V PL +F + + C+ + F L +W
Sbjct: 56 GNTCYMNAVLQCLASVPPLAQYFRSGQYVTALRKDCRE-VATAFAYLLTDMWLGD--ADC 112
Query: 254 VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN----------------- 296
VSP EF +A + F Q + EF+ ++LN LH LR
Sbjct: 113 VSPEEF-RAALGRLHPDFTKRTQQDAQEFLIYVLNALHEALRKYHQRSGEKRSTQRCCSR 171
Query: 297 -TKKNTSIIYECFQGEL 312
TSII + F+G+L
Sbjct: 172 GIASETSIITQLFEGQL 188
>gi|443694057|gb|ELT95284.1| hypothetical protein CAPTEDRAFT_97991, partial [Capitella teleta]
Length = 841
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 48/225 (21%)
Query: 125 SVSLSNLNVYACLVCGKYYQGRGQKS--HAYTHSLEAGHHVYI-NLRTEKVYCLPDGYEI 181
S + N++ C+ G + G G+ + H+ TH+ + +H + NL + +++C E+
Sbjct: 3 SCDVQGPNLWLCMHAGCLFTGCGEMAQDHSTTHAKQNKNHCLVMNLTSLRIWCYKCEGEV 62
Query: 182 ----NDPSL---------------------------------EDIRH----VGLNNIKET 200
NDP +D + GL NI T
Sbjct: 63 FKDNNDPPFLFRSVVEPTSSLHSSPSRSNSPCGDMDTESESDDDTQKPRGLTGLQNIGNT 122
Query: 201 DFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSPLVH-RFGDLTRKIWHARNFKGQVSPHE 258
++N IQSL PL FFL P + K P++ + L ++IWH + V P
Sbjct: 123 CYMNAAIQSLSNCPPLCRFFLDSPAYVKSDKKPMLSLSYMKLMQEIWHKKR-PSYVVPSS 181
Query: 259 FLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
Q + K FR Q + EF+ ++ +H +L+ S+
Sbjct: 182 VSQGI-KFIHPMFRGYTQQDAQEFLRCFMDQVHEELKQPITAPSV 225
>gi|281312477|sp|A5PN09.1|UBP20_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
Length = 911
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 99/265 (37%), Gaps = 63/265 (23%)
Query: 105 CPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD+ V ++ L + C S + N++ACL C Y G G+ H+ H+
Sbjct: 8 CPHLDSIGEVTKEELIQKSKGTCQSCGVGGPNLWACLQCDCPYVGCGESYSDHSTIHAQA 67
Query: 159 AGHHVYINLRTEKVYCLPDGYEI--------------------NDPSLEDIRH------- 191
H++ +NL T +V+C E+ DP + +
Sbjct: 68 KKHNLTVNLTTFRVWCYVCEREVFLEPKPVTPVSSAHRCKPHDQDPVSQTTCYPLKAVPI 127
Query: 192 --------------------VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RHCK 230
G+ NI + ++N +Q+L PL FF R K
Sbjct: 128 AVADEEGSESEEDELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFQDCSGLVRTDK 187
Query: 231 SP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
P L + L ++WH + V P + K FR Q + EF+ L++
Sbjct: 188 KPALCKSYQKLISELWHKKR-PSYVVPTTLFHGI-KLVNPMFRGYAQQDTQEFLRCLMDQ 245
Query: 290 LHSDLRNTKKNTSIIYECFQGELEV 314
LH +L+ +++C G EV
Sbjct: 246 LHEELKEP------LFDCSGGISEV 264
>gi|345787400|ref|XP_003432923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Canis
lupus familiaris]
Length = 917
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL +N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 432 L---PLPLKKDRVMEIFLVP 448
>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
[Coccomyxa subellipsoidea C-169]
Length = 380
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N ++Q L PL FL P+N K L FG L +
Sbjct: 3 AGLSNLGNTCFMNSSVQCLAHAAPLVRVFLTGAYKRDLNPDNPLGNKGELAEAFGSLMKL 62
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W G VSP F +A + +F Q + E +++LL+ LH DL ++ +
Sbjct: 63 LWQGG--VGSVSPKGF-KAALARFAPQFGGYSQQDSQELLAFLLDGLHEDLNRVRQKPYV 119
>gi|328715747|ref|XP_001949023.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Acyrthosiphon pisum]
Length = 898
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 180 EINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGD 239
+++DP+ E I GL N+ T F++ +Q+L+ L ++FL ++ + L+ +F D
Sbjct: 130 DLSDPTAE-IGVCGLRNLGNTCFMSAGLQALLSTESLVSYFLSFDD-DGSEDTLIGQFSD 187
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
L +++W+ + ++PH+F + V+ +FR Q + EF++ LL++L+ +L
Sbjct: 188 LAKRVWNGQ--YSVINPHQF-KYVLGKRYAQFRDCSQHDCQEFLALLLDSLNDEL 239
>gi|326436309|gb|EGD81879.1| ubiquitin specific peptidase 11 [Salpingoeca sp. ATCC 50818]
Length = 1525
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--KSPLVHR------FGDLTRK 243
GL+N+ T F+N +Q L+ PL +FL ++ +PL H+ +G L +
Sbjct: 891 AGLSNLGNTCFLNSAVQCLVHTRPLTEYFLRRQHVLELNKANPLGHQGVIASEYGRLVSR 950
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
+W N KG V+P + AV K + F Q + EF+S+LL+ LH DL K
Sbjct: 951 LW---NGKGCVAPVKLRSAVQKFAPH-FAGYQQHDSQEFLSFLLDGLHEDLNRVMKK 1003
>gi|150864435|ref|XP_001383247.2| hypothetical protein PICST_69820 [Scheffersomyces stipitis CBS
6054]
gi|149385691|gb|ABN65218.2| peptidase C19, ubiquitin C-terminal hydrolase 2 [Scheffersomyces
stipitis CBS 6054]
Length = 1340
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 179 YEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK--SPL--- 233
Y+ + S + H+GL+N+ T ++N +Q L+ V + +FL R +PL
Sbjct: 310 YDFDKLSSKSSGHLGLSNLGNTCYMNSALQCLLHVAEVNYYFLYNLYKRELNFDNPLGNH 369
Query: 234 ---VHRFGDLTRKIWHARNFK-GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
+ FG+L ++ + + K ++P EF + + S F +Q + EF+SWLL+
Sbjct: 370 GDIANAFGNLLKQAFDPSSSKDSSITPREFKSTIGRYS-SMFSGYMQQDSQEFLSWLLDA 428
Query: 290 LHSDLRNTKK 299
LH DL K
Sbjct: 429 LHEDLNRIHK 438
>gi|189230348|ref|NP_001121498.1| ubiquitin specific peptidase 15 [Xenopus (Silurana) tropicalis]
gi|183985939|gb|AAI66318.1| LOC100158604 protein [Xenopus (Silurana) tropicalis]
Length = 955
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 173 YCLPD-----GYEINDPSLEDIRH------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
YCLP YE ++P RH GL+N+ T F+N IQ L PL +FL
Sbjct: 233 YCLPSYAAYKNYEYSEPG----RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL 288
Query: 222 IP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+N + + + +L +++W + V+P F V + + +F
Sbjct: 289 NDKYQDELNMDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFA-PQFSG 345
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTE 331
Q + E +++LL+ LH DL +K I + G + V +E +N I ND
Sbjct: 346 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHIKRNDSIIV 405
Query: 332 KGSDGGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNI 373
G + E S++ PF L L LP PL K + K I
Sbjct: 406 DIFHGLFKSTLVCPECSKISVTFDPFCYLTLPLPMKKERALEVYLVRMDPLAKPMQYKVI 465
Query: 374 IPQL 377
+P++
Sbjct: 466 VPKI 469
>gi|410919483|ref|XP_003973214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Takifugu
rubripes]
Length = 1001
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L +PL +FL EN + + + DL ++
Sbjct: 320 CGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINRENPLGMRGEIAEAYADLVKQ 379
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W +R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 380 MWLSRS--SYVAPRSFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 436
Query: 304 IYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+G + V KE N ND G + E S++ PF L
Sbjct: 437 ALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLT 496
Query: 357 LDLP 360
L LP
Sbjct: 497 LPLP 500
>gi|195998894|ref|XP_002109315.1| hypothetical protein TRIADDRAFT_53214 [Trichoplax adhaerens]
gi|190587439|gb|EDV27481.1| hypothetical protein TRIADDRAFT_53214 [Trichoplax adhaerens]
Length = 813
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY--RHCKSPLVHRFGDLTRKIWHARN 249
GL+N+ T +++ +Q++ PL + L E Y R + R+ L + +W ++
Sbjct: 150 CGLSNLGNTCYISAALQAMSNCVPLTQYCLECEKYIARIPVDSIAKRYCKLIQDMW-SKK 208
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
V+P EF+Q+V KA+ FR Q + EF+ +LN LH + +
Sbjct: 209 RNDYVTPTEFVQSVKKAN-PLFRGSSQQDAHEFLRCILNLLHEETK 253
>gi|354546306|emb|CCE43036.1| hypothetical protein CPAR2_206790 [Candida parapsilosis]
Length = 1322
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTR 242
H+GL+N+ T ++N +Q L+ V + +F I + + +PL + FG L +
Sbjct: 337 HMGLSNLGNTCYMNSALQCLLHVPEINQYFFHNIYQKELNADNPLGYNGDVANAFGSLLK 396
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+ + +SP +F + + S F +Q + E +SWLL+ LH DL
Sbjct: 397 QAFDPAKTSSSISPRDFKHTIGRYS-SMFSGYLQQDSQELLSWLLDALHEDL 447
>gi|345787398|ref|XP_533829.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Canis
lupus familiaris]
Length = 964
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL +N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEIFLVP 495
>gi|341889009|gb|EGT44944.1| hypothetical protein CAEBREN_17498 [Caenorhabditis brenneri]
Length = 1056
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH---------CKSPLVHRFGDLT 241
+ GL NI T F+N +Q L+ LR FFL E+Y+ + L F D
Sbjct: 454 YTGLRNIGNTCFMNAILQMLVNNVELREFFL-REHYQSEINESNPLGSEGRLARAFADFM 512
Query: 242 RKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN- 300
+++W R+ + P + ++ ++ +F Q + EF+S+LL+ LH D+ KK
Sbjct: 513 QQMWSGRH--KAIEPIQ-IKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKP 569
Query: 301 -TSIIYECFQGELEVVKEIPKNTISGND 327
T + + +L+V E +N I ND
Sbjct: 570 LTGTVESHGRHDLDVSNEAWRNHILRND 597
>gi|224056675|ref|XP_002298967.1| predicted protein [Populus trichocarpa]
gi|222846225|gb|EEE83772.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L+ L +FL +N L FGDL RK+
Sbjct: 323 AGLQNMGNTCFMNSALQCLVHTPQLVEYFLQDYSEEINTQNPLGMHGELALAFGDLLRKL 382
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + + V+P F + + +F Q + E +++LL+ LH DL K+ I
Sbjct: 383 WSSG--RTAVAPRVF-KGKLALFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 439
Query: 305 YECFQGE--LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ + GE E+ E +N + ND G + S++ PF+ L L
Sbjct: 440 MKDWSGEPDEEIADECWRNHKARNDSVIVDVCQGQYKSTLVCPICSKISVTFDPFMYLSL 499
Query: 358 DLP 360
LP
Sbjct: 500 PLP 502
>gi|219123565|ref|XP_002182093.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406694|gb|EEC46633.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1183
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 24/190 (12%)
Query: 122 KFCSVSLSNLNVYACLVCGKYY--QGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGY 179
FCS C C Y Q Q+SH H N TE+
Sbjct: 495 SFCSACYRAGATMRCKRCMSVYYCQRSCQESHWQFHKAPCKRLAATN--TEET------- 545
Query: 180 EINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTP-----LRNFFLIPENYRH---C 229
+ P L + VGL+N+ T F+N +Q L TP L N +LI N +
Sbjct: 546 -VGSPVLPPPSYGRVGLHNLGNTCFMNSALQCLSHATPLTRSFLSNLYLIDVNVDNPLGS 604
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
L H +G + + +W N +SP +A+ + RF +Q + EF+++LL+
Sbjct: 605 GGNLAHAYGAVLKDLWMKSN-TTSLSPTALKRAIAMFA-PRFAGCLQHDAQEFLAYLLDG 662
Query: 290 LHSDLRNTKK 299
LH DL ++
Sbjct: 663 LHEDLNRVRQ 672
>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
Length = 538
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSPLVHRFG-----DLTRK 243
R GL N+ T F+N +Q+L + R + L +P + + + + G D +K
Sbjct: 219 RPRGLRNLGNTCFMNAVLQALACIKDFREYILNLPSLEDYVEDEKIAQNGNCFLTDEYQK 278
Query: 244 I---WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK- 299
+ ARNF+ SP+EF +A + A RFR Q + EF+ +LL+ +H+++R +
Sbjct: 279 LLASMSARNFRDPTSPNEFREAFVSAC-PRFRGFRQHDSHEFLRYLLDQMHTEMRKCRNL 337
Query: 300 ------NTSIIYECFQGELE 313
T+ I + F+G L+
Sbjct: 338 PEMPDDKTTPISKSFEGTLQ 357
>gi|431913420|gb|ELK15095.1| Ubiquitin carboxyl-terminal hydrolase 4 [Pteropus alecto]
Length = 964
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 ELKDASGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNII 374
L P PL KD VME ++
Sbjct: 479 L---PLPLKKDRVMEVFLV 494
>gi|25150771|ref|NP_498311.2| Protein CYK-3, isoform a [Caenorhabditis elegans]
gi|18766553|gb|AAL79016.1|AF469173_1 ubiquitin c-terminal hydrolase [Caenorhabditis elegans]
gi|351062913|emb|CCD70947.1| Protein CYK-3, isoform a [Caenorhabditis elegans]
Length = 1175
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHR---------FGDLTR 242
VGL N + N IQ L RV+PL +FL +N K + R + L R
Sbjct: 567 VGLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLR 626
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
++W A+ K ++P++F A+ + S F Q + EF+++LL+ LH+ + + K+
Sbjct: 627 EMWAAK--KKNIAPNDFNDAI-RLSSDMFECSEQHDCQEFVAFLLDQLHTSMYESNKS 681
>gi|115529049|gb|AAI25132.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
Length = 963
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 362 MWSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G E +++ PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLGCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 479 L---PLPLKKDRVMEVFLVP 495
>gi|426023756|sp|F6Z5C0.2|UBP15_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
Length = 982
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 173 YCLPD-----GYEINDPSLEDIRH------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
YCLP YE ++P RH GL+N+ T F+N IQ L PL +FL
Sbjct: 262 YCLPSYAAYKNYEYSEPG----RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL 317
Query: 222 IP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+N + + + +L +++W + V+P F V + + +F
Sbjct: 318 NDKYQDELNMDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFA-PQFSG 374
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTE 331
Q + E +++LL+ LH DL +K I + G + V +E +N I ND
Sbjct: 375 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHIKRNDSIIV 434
Query: 332 KGSDGGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNI 373
G + E S++ PF L L LP PL K + K I
Sbjct: 435 DIFHGLFKSTLVCPECSKISVTFDPFCYLTLPLPMKKERALEVYLVRMDPLAKPMQYKVI 494
Query: 374 IPQL 377
+P++
Sbjct: 495 VPKI 498
>gi|71997161|ref|NP_001022992.1| Protein CYK-3, isoform b [Caenorhabditis elegans]
gi|351062914|emb|CCD70948.1| Protein CYK-3, isoform b [Caenorhabditis elegans]
Length = 1178
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHR---------FGDLTR 242
VGL N + N IQ L RV+PL +FL +N K + R + L R
Sbjct: 570 VGLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLR 629
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
++W A+ K ++P++F A+ + S F Q + EF+++LL+ LH+ + + K+
Sbjct: 630 EMWAAK--KKNIAPNDFNDAI-RLSSDMFECSEQHDCQEFVAFLLDQLHTSMYESNKS 684
>gi|297742456|emb|CBI34605.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 175 LPDGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PEN 225
+ DGY++ + R GL N+ T F+N IQ L+ P+ +FL +N
Sbjct: 306 MEDGYDVLRSVAKGDRGGLAGLQNLGNTCFMNSAIQCLVHTPPIFEYFLQDYTEEINKQN 365
Query: 226 YRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSW 285
L FG+L RK+W + + V+P F + + + + F Q + E +++
Sbjct: 366 PLGMNGELAFAFGELLRKLWSSG--RTPVAPRAFKGKLARFAPQ-FSGYNQHDSQELLAF 422
Query: 286 LLNTLHSDLRNTKKNTSIIYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
LL+ LH DL K+ I + G + EV E +N + ND G +
Sbjct: 423 LLDGLHEDLNRVKQKPYIETKDSNGRPDEEVADECWRNHKARNDSLIVDVCQGQYKSTLV 482
Query: 344 TTETSRM-----PFLMLGLDLP 360
S++ PF+ L L LP
Sbjct: 483 CPVCSKISITFDPFMYLSLPLP 504
>gi|410898910|ref|XP_003962940.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Takifugu
rubripes]
Length = 1589
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--ENYRHCKSP------LVHRFGDLTRK 243
GL N+ T F+N IQSL LR++FL E +C +P L F L R
Sbjct: 747 TGLVNLGNTCFMNSVIQSLSNTRELRDYFLDRGFEAEINCSNPLGTGGRLAIGFAVLLRA 806
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W + Q S L+A++ + +F Q + EFM++LL+ LH DL
Sbjct: 807 LWKGTHHAFQPSK---LKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDL 854
>gi|322800359|gb|EFZ21363.1| hypothetical protein SINV_03789 [Solenopsis invicta]
Length = 918
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL NI T ++N +Q+L V+PL FFL + + K L + +L R +W+
Sbjct: 185 VGLQNIGNTCYMNAALQALSNVSPLTQFFLDCGHMVSYMSKDRKPGLSLNYLNLIRDMWN 244
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYE 306
+ +G V PH L + + FR Q + EF+ ++ LH +L+ ++ +
Sbjct: 245 KKT-RGYVVPHGILSGI-RTVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEDDRDVQL 302
Query: 307 CFQG------ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
+G E E EI N S +D E G + +++ E R
Sbjct: 303 RLKGLGDQSSEDEDETEIDGNASSQSDAEYETCDSGVSEQSSLSDEGER 351
>gi|448510992|ref|XP_003866441.1| Ubp12 protein [Candida orthopsilosis Co 90-125]
gi|380350779|emb|CCG21001.1| Ubp12 protein [Candida orthopsilosis Co 90-125]
Length = 1293
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTR 242
H+GL+N+ T ++N +Q L+ V + +F I + + +PL + FG L +
Sbjct: 331 HMGLSNLGNTCYMNSALQCLLHVPEINQYFFHNIYQKELNVDNPLGYNGDVANAFGSLLK 390
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
+ + +SP +F + + S F +Q + E +SWLL+ LH DL +K
Sbjct: 391 QAFDPAKTSSSMSPRDFKYTIGRYSS-MFSGYLQQDSQELLSWLLDALHEDLNRIQK 446
>gi|297846262|ref|XP_002891012.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297336854|gb|EFH67271.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 894
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 17/182 (9%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRHCKSPLVHRFGDLTRKIW 245
GL N+ T F+N T+Q L P+ +FL EN + L FG+L RK+W
Sbjct: 296 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYSSDINAENPLGMRGELAIAFGELLRKLW 355
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ + V+P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 356 SSG--QNAVAPRAFKTKLARFAPQ-FSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEA 412
Query: 306 ECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGLD 358
+ G + EV +E K + ND G + + ++ PF+ L L
Sbjct: 413 KDSDGRPDDEVAEEKWKYHKARNDSVIVDVCQGQYKSTLVCPDCGKISITFDPFMYLSLP 472
Query: 359 LP 360
LP
Sbjct: 473 LP 474
>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
Length = 367
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 25/202 (12%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L PL ++FL E N K + + +L +++
Sbjct: 10 GLGNLGNTXFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 69
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 70 WSGRD--AHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLE 126
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + V KE +N ND G + E +++ PF L L
Sbjct: 127 LKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL 186
Query: 358 DLPPPPLFKD-VMEKNIIPQLQ 378
P PL KD VME P LQ
Sbjct: 187 ---PLPLKKDRVMEG---PMLQ 202
>gi|332026284|gb|EGI66421.1| Ubiquitin carboxyl-terminal hydrolase 33 [Acromyrmex echinatior]
Length = 918
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL NI T ++N +Q+L V+PL FFL + + K L + +L R +W+
Sbjct: 185 VGLQNIGNTCYMNAALQALSNVSPLTQFFLDCGHMVNYMSKDRKPGLSLNYLNLIRDMWN 244
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYE 306
+ +G V PH L + + FR Q + EF+ ++ LH +L+ ++ I
Sbjct: 245 KKT-RGYVVPHGILSGI-RTVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEDDRDIQL 302
Query: 307 CFQG------ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSR 349
+G E E EI N S +D E G + +++ E R
Sbjct: 303 RLKGLGDQSSEDEDETEIDGNASSQSDAEYETCDSGVSEQSSLSDEGER 351
>gi|427778559|gb|JAA54731.1| Putative ubiquitin specific peptidase 2 [Rhipicephalus pulchellus]
Length = 494
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +Q L PL + L I + K L F L + I
Sbjct: 60 LGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDGYVSEINTSTSSMKGALFEAFATLMKSI 119
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
W + N + +SP F + K + RF Q + EF+ +LL LH D+
Sbjct: 120 WRSSNGEYAISPQAFRSQIQKFA-PRFMGYSQQDSQEFLHYLLQGLHEDI 168
>gi|359473972|ref|XP_002279130.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Vitis
vinifera]
Length = 1013
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 175 LPDGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PEN 225
+ DGY++ + R GL N+ T F+N IQ L+ P+ +FL +N
Sbjct: 375 MEDGYDVLRSVAKGDRGGLAGLQNLGNTCFMNSAIQCLVHTPPIFEYFLQDYTEEINKQN 434
Query: 226 YRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSW 285
L FG+L RK+W + + V+P F + + + + F Q + E +++
Sbjct: 435 PLGMNGELAFAFGELLRKLWSSG--RTPVAPRAFKGKLARFAPQ-FSGYNQHDSQELLAF 491
Query: 286 LLNTLHSDLRNTKKNTSIIYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNI 343
LL+ LH DL K+ I + G + EV E +N + ND G +
Sbjct: 492 LLDGLHEDLNRVKQKPYIETKDSNGRPDEEVADECWRNHKARNDSLIVDVCQGQYKSTLV 551
Query: 344 TTETSRM-----PFLMLGLDLP 360
S++ PF+ L L LP
Sbjct: 552 CPVCSKISITFDPFMYLSLPLP 573
>gi|354476435|ref|XP_003500430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cricetulus
griseus]
Length = 967
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 306 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 365
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 366 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 422
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 423 EPKDASGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 482
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 483 L---PLPLKKDRVMEVFLVP 499
>gi|38014646|gb|AAH60390.1| Usp36 protein [Xenopus laevis]
Length = 715
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL N+ T F+N T+Q L PL N+ L E+ +C+ + + N
Sbjct: 120 AGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHTSNCQQSGFCMLCIMQNHLIQVFANS 179
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
V P F++ +K + FR G Q + EF+ + ++ + ++ L + TS+
Sbjct: 180 GNNVKPVSFIRE-LKRIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYARLDRHSQATSL 238
Query: 304 IYECFQGEL--EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+++ F G L V I KN SD D + +I E +P ++ L++
Sbjct: 239 VHQIFGGYLRSRVTCSICKNV-----------SDTYDPYLDIALEIRNVPNIVCALEM 285
>gi|405962262|gb|EKC27956.1| Ubiquitin carboxyl-terminal hydrolase 2 [Crassostrea gigas]
Length = 368
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE-------NYRHCKSPLVHRFGDLTRKI 244
VGL N+ T F+N +Q L PL +FL + K LV + +L + +
Sbjct: 64 VGLRNLGNTCFMNSVLQCLSNTKPLLEYFLRDDFTFDKNTTTSSMKGQLVTAYANLMKSM 123
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
W+ R+ QVSP+ F + + + RF Q + EF+ +LL LH D+
Sbjct: 124 WNERS-DSQVSPNSFKTQIQRFA-PRFMGYAQQDAQEFLRYLLEGLHEDV 171
>gi|392589983|gb|EIW79313.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 1272
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
+GL N+ T F+N +Q L L ++FL P+N + + FG L K
Sbjct: 404 LGLGNMGNTCFMNSALQCLAHNKELMDYFLFGVYHQELNPDNPLGMQGAIAEAFGALVDK 463
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW + SP EF A+ + + + F Q + E +++LL+ LH DL K +
Sbjct: 464 IWATNSTMSSYSPREFKMALQRFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYV 522
>gi|145547132|ref|XP_001459248.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427072|emb|CAK91851.1| unnamed protein product [Paramecium tetraurelia]
Length = 1050
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 181 INDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--------KSP 232
IND S++ I GL N+ T F+N Q L L +F+ + + K
Sbjct: 373 INDQSVKGI--AGLANLGNTCFMNSGTQCLSNTYQLSEYFITNKYFDEINEDNPLGTKGQ 430
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
LV ++ L +K+W K V P F +AV + + F+ Q + E +++LL+ LH
Sbjct: 431 LVRKYASLIKKLWCGH--KNIVIPTSFKKAVGQF-QPMFKGFQQHDSSELITFLLDGLHE 487
Query: 293 DLRNTKKNTSIIYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM 350
DL KK + + QG + EV KE N ++ N Q+ G + T
Sbjct: 488 DLNRVKKKPYVESKDNQGKPDFEVAKESWDNHLARN-QSIIVDLMHGQYKSTLKCPTCSQ 546
Query: 351 ------PFLMLGLDLP 360
PFL GL +P
Sbjct: 547 ISITFDPFLTCGLSIP 562
>gi|54038146|gb|AAH84261.1| Usp36 protein [Xenopus laevis]
Length = 345
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL N+ T F+N T+Q L PL N+ L E+ +C+ + + N
Sbjct: 120 AGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHTSNCQQSGFCMLCIMQNHLIQVFANS 179
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
V P F++ +K + FR G Q + EF+ + ++ + ++ L + TS+
Sbjct: 180 GNNVKPVSFIRE-LKRIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYARLDRHSQATSL 238
Query: 304 IYECFQGEL--EVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDL 359
+++ F G L V I KN SD D + +I E +P ++ L++
Sbjct: 239 VHQIFGGYLRSRVTCSICKNV-----------SDTYDPYLDIALEIRNVPNIVCALEM 285
>gi|297813507|ref|XP_002874637.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297320474|gb|EFH50896.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 913
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL+N+ T F+N +Q L P+ ++FL +N L FGDL +K+
Sbjct: 300 AGLSNLGNTCFMNSALQCLAHTPPIVDYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKL 359
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
W +RN V+P F + + + + F Q + E +++LL+ LH DL K+ I
Sbjct: 360 WSSRN---AVAPRSFKTKLARFAPQ-FSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYI 414
>gi|344252839|gb|EGW08943.1| Ubiquitin carboxyl-terminal hydrolase 4 [Cricetulus griseus]
Length = 940
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 279 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 338
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 339 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 395
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 396 EPKDASGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 455
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 456 L---PLPLKKDRVMEVFLVP 472
>gi|444725487|gb|ELW66051.1| Ubiquitin carboxyl-terminal hydrolase 49 [Tupaia chinensis]
Length = 459
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 117/292 (40%), Gaps = 50/292 (17%)
Query: 121 EKFCSVSLSNL-NVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYC-LPDG 178
+K+C + + +V+ACL C GR + HA H + GH + + +R V+C L
Sbjct: 22 QKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEDTGHPLAMEVRDLYVFCYLCKD 81
Query: 179 YEINDPSLEDIRHV------------------GLNNIKETDFVNVTIQSLMRVTPLRNFF 220
Y +ND D++ + GL N+ T ++N +Q L + R F
Sbjct: 82 YVLNDNPEGDLKLLRSSLLAPRRQPAVAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECF 141
Query: 221 LI--PENYRHC-------KSP------LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMK 265
L P H K P L H L R +W + VSP L +V
Sbjct: 142 LNLDPSKTGHLSLELIQNKEPSSKHISLCHELHTLFRVMWSGK--WALVSPFAMLHSVWS 199
Query: 266 ASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGEL--EVVKEIPKNTI 323
FR Q + EF+ LL+ + +L + I+ Q +L +V+K + NTI
Sbjct: 200 LIPA-FRGYDQQDAQEFLCELLHKVQQELESEGAARRILIPFSQRKLTKQVLKVV--NTI 256
Query: 324 SGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIP 375
+ Q + + ++ + T E PF L L+ P +EK +P
Sbjct: 257 F-HGQLLSQVTCVSCNYKSNTIE----PFWDLSLEFPER---YHCIEKGFVP 300
>gi|336381122|gb|EGO22274.1| hypothetical protein SERLADRAFT_440291 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1348
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHR 236
+++D +GL N+ T F+N +Q L + L ++F L P+N +
Sbjct: 425 AVQDPGTLGLGNMGNTCFMNSALQCLAHLEELTDYFISGVYQDELNPDNPLGMHGAIAEA 484
Query: 237 FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN 296
FG L ++IW + SP EF Q + + + + F Q + E +++LL+ LH DL
Sbjct: 485 FGSLLQRIWATNSPSTSYSPREFKQQLQRFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNR 543
Query: 297 TKKNTSIIYECFQ--GELEVVK 316
K + ++ G+LE+ +
Sbjct: 544 VLKKPYVEKPDWEGGGDLELAQ 565
>gi|440791317|gb|ELR12560.1| putative ubiquitin carboxylterminal hydrolase 11, putative
[Acanthamoeba castellanii str. Neff]
Length = 1170
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--------IPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L TPL FFL P N K L +FG+L
Sbjct: 341 TGLHNLGNTCFMNSALQCLSNTTPLLRFFLNNAHLAEINPTNPLGMKGELAKKFGELLVN 400
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W + V P EF ++V+ +F Q + E +S++L+ +H DL
Sbjct: 401 LWSGK--YTTVVPREF-KSVLSKFAPQFAGYQQHDSQELLSFVLDGIHEDL 448
>gi|47229603|emb|CAG06799.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1107
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L +PL +FL EN + + + DL ++
Sbjct: 321 CGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINRENPLGMRGEIAEAYADLVKQ 380
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W +R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 381 MWLSRS--SYVAPRTFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 437
Query: 304 IYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+G + V KE N ND G + E S++ PF L
Sbjct: 438 ALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLT 497
Query: 357 LDLP 360
L LP
Sbjct: 498 LPLP 501
>gi|388583864|gb|EIM24165.1| UCH-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 1059
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
VGL N+ T F+N +Q L + L +FL P+N + FG L K
Sbjct: 337 VGLQNLGNTCFMNSALQCLSNTSELSVYFLSGLYSKELNPDNPLGMSGQVAESFGQLVNK 396
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
+W+ + V+P EF + K + G Q + EF+++LL+ LH DL K
Sbjct: 397 LWYGSS--NSVAPREFKYTLSKFAPSFAGYG-QQDTQEFLAFLLDGLHEDLNRIK 448
>gi|336368311|gb|EGN96654.1| hypothetical protein SERLA73DRAFT_111301 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1271
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 185 SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHR 236
+++D +GL N+ T F+N +Q L + L ++F L P+N +
Sbjct: 370 AVQDPGTLGLGNMGNTCFMNSALQCLAHLEELTDYFISGVYQDELNPDNPLGMHGAIAEA 429
Query: 237 FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRN 296
FG L ++IW + SP EF Q + + + + F Q + E +++LL+ LH DL
Sbjct: 430 FGSLLQRIWATNSPSTSYSPREFKQQLQRFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNR 488
Query: 297 TKKNTSIIYECFQ--GELEVVK 316
K + ++ G+LE+ +
Sbjct: 489 VLKKPYVEKPDWEGGGDLELAQ 510
>gi|62897009|dbj|BAD96445.1| ubiquitin specific protease, proto-oncogene isoform b variant [Homo
sapiens]
Length = 916
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL ++FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ +P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 315 MWSGRD--AHAAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQGELEVV--KEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V +E +N ND G + E +++ PF L
Sbjct: 372 ELKDANGRPDAVAAEEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD VME ++P
Sbjct: 432 L---PLPLKKDRVMEVFLVP 448
>gi|426196599|gb|EKV46527.1| hypothetical protein AGABI2DRAFT_178845 [Agaricus bisporus var.
bisporus H97]
Length = 1277
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTRK 243
+GL+N+ T F+N +Q L+ L ++FL + E+ + +PL FG L +
Sbjct: 407 LGLSNMGNTCFMNSALQCLVHTKELSDYFLSGVFEDELNADNPLGMGGAIAEAFGSLLHR 466
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW SP EF Q + K + + F Q + E +++LL+ LH DL K +
Sbjct: 467 IWADSGPSTSYSPREFKQVLQKFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNRILKKPYV 525
Query: 304 IYECFQ--GELEVVK 316
++ G LE+V+
Sbjct: 526 EKPDWEGGGNLELVQ 540
>gi|348678876|gb|EGZ18693.1| hypothetical protein PHYSODRAFT_503684 [Phytophthora sojae]
Length = 1124
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 20/130 (15%)
Query: 184 PSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----------IPENYRH---- 228
P+ E + VGL N+ T F+N +Q L+ PLR++FL E RH
Sbjct: 482 PTFEGV--VGLRNLGNTCFMNSMLQCLINTAPLRDYFLEKDPETGSPFFTKEINRHNPLG 539
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
K + F L RKIW F V+P L++V+ +F Q + E M++LL+
Sbjct: 540 MKGIMAVEFASLLRKIWSG-EFTA-VAPTS-LKSVIGQYAPQFAGYQQQDSQELMNFLLD 596
Query: 289 TLHSDLRNTK 298
LH DL K
Sbjct: 597 GLHEDLNRVK 606
>gi|118399164|ref|XP_001031908.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89286243|gb|EAR84245.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 680
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
VGL+N+ T F+N +Q L V PL ++FL +++ + + +F +L
Sbjct: 84 VGLSNLGNTCFMNSALQCLSNVPPLCDYFLSKLHEKEINYDSFLGSQGKITQQFAELMID 143
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH--SDLRNT-KKN 300
+W+ + + P +FL+A+ +F G Q + EF+++L++ LH S L N ++N
Sbjct: 144 MWNTSD--SYIIPQKFLRAIGNFG-PQFADGSQQDSHEFLAFLMDILHEVSQLTNQLQQN 200
Query: 301 TSIIYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLM 354
+E ++ +L VK+ P I G D N G+D++ E + +LM
Sbjct: 201 KQNFFEIYK-DLNRVKQKP--YIEGKDYN-------GNDYEKYAKECWK-EYLM 243
>gi|119609939|gb|EAW89533.1| ubiquitin specific peptidase 36, isoform CRA_a [Homo sapiens]
Length = 1075
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|342319397|gb|EGU11346.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 1438
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
VGL N+ T F+N IQ + L+ +FL EN + + FG L +
Sbjct: 478 VGLQNLGNTCFMNSAIQCMSNTKELQEYFLSGVYHSELNRENPLGMRGQVAEAFGQLIER 537
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W+ V+P EF QA+ + + + G Q + E +++LL+ H DL KK +
Sbjct: 538 LWNGTG--SSVAPREFKQALARFAPQFSGYG-QQDSQELLAFLLDGTHEDLNRIKKKPAT 594
Query: 304 IYECFQG 310
++G
Sbjct: 595 EAPDWEG 601
>gi|332253964|ref|XP_003276102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Nomascus
leucogenys]
Length = 565
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+T
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFWQEVPGGGR--AQELTEAFADVTGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|409081365|gb|EKM81724.1| hypothetical protein AGABI1DRAFT_118809 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1253
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTRK 243
+GL+N+ T F+N +Q L+ L ++FL + E+ + +PL FG L +
Sbjct: 345 LGLSNMGNTCFMNSALQCLVHTKELSDYFLSGVFEDELNADNPLGMGGAIAEAFGSLLHR 404
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW SP EF Q + K + + F Q + E +++LL+ LH DL K +
Sbjct: 405 IWADSGPSTSYSPREFKQVLQKFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNRILKKPYV 463
Query: 304 IYECFQ--GELEVVK 316
++ G LE+V+
Sbjct: 464 EKPDWEGGGNLELVQ 478
>gi|15030172|gb|AAH11341.1| Usp4 protein [Mus musculus]
Length = 915
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 315 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 432 L---PLPLKKDRIMEVFLVP 448
>gi|403364554|gb|EJY82041.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1072
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--------KSPLVHRFGDLTRK 243
VGL N+ T F+N IQ L PL ++F +Y K + FG L +
Sbjct: 233 VGLYNLGNTCFINTAIQCLSACQPLTDYFNSNLHYEEINEVNPMGYKGEVSRAFGKLVKL 292
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W N ++ P F + + K + F G Q + EF+S+LL+ LH DL
Sbjct: 293 MWR-DNSHTKIYPIRFCKVIEKWA-SHFANGSQQDTQEFISYLLDCLHEDL 341
>gi|397635885|gb|EJK72050.1| hypothetical protein THAOC_06457, partial [Thalassiosira oceanica]
Length = 528
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
VGL+N+ T F+N ++Q L PL ++FL +N+ K L + ++ +
Sbjct: 107 VGLSNLGNTCFLNSSVQCLSNTIPLTDYFLGYDYRSEINHDNFLGSKGALASSYAEVVKH 166
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W + + SP F ++ K + + F Q + E +++LL+ +H DL K I
Sbjct: 167 LWLGQGAQ-HYSPGRFKSSLAKFAPQ-FDGSQQHDAQELLAYLLDGMHEDLNRVKSKPYI 224
>gi|148689334|gb|EDL21281.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a [Mus
musculus]
Length = 915
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 315 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 432 L---PLPLKKDRIMEVFLVP 448
>gi|168270556|dbj|BAG10071.1| ubiquitin carboxyl-terminal hydrolase 36 [synthetic construct]
Length = 1121
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|47940448|gb|AAH71582.1| USP36 protein [Homo sapiens]
Length = 1123
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|7023072|dbj|BAA91825.1| unnamed protein product [Homo sapiens]
Length = 954
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|116284123|gb|AAH16487.1| USP36 protein [Homo sapiens]
Length = 963
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|7959165|dbj|BAA95977.1| KIAA1453 protein [Homo sapiens]
Length = 1123
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 124 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 183
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 184 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 242
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 243 VHQIFGGYL 251
>gi|10434580|dbj|BAB14306.1| unnamed protein product [Homo sapiens]
gi|37727299|gb|AAO34133.1| deubiquitinating enzyme 1 [Homo sapiens]
Length = 548
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|124056592|sp|Q9P275.3|UBP36_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1121
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|122114651|ref|NP_079366.3| ubiquitin carboxyl-terminal hydrolase 36 [Homo sapiens]
gi|119609940|gb|EAW89534.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609941|gb|EAW89535.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609942|gb|EAW89536.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
Length = 1123
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|441643579|ref|XP_003278478.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Nomascus leucogenys]
Length = 1122
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|2580459|gb|AAB82339.1| putative [Mus musculus]
Length = 962
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 362 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 479 L---PLPLKKDRIMEVFLVP 495
>gi|74142121|dbj|BAE41120.1| unnamed protein product [Mus musculus]
Length = 962
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 362 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 479 L---PLPLKKDRIMEVFLVP 495
>gi|116283676|gb|AAH27992.1| USP36 protein [Homo sapiens]
Length = 959
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|402901257|ref|XP_003913570.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Papio anubis]
Length = 1123
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|42542785|gb|AAH66180.1| Usp4 protein, partial [Mus musculus]
gi|45219741|gb|AAH66865.1| Usp4 protein, partial [Mus musculus]
Length = 961
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 301 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 360
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 361 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 417
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 418 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 477
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 478 L---PLPLKKDRIMEVFLVP 494
>gi|2655204|gb|AAC53587.1| ubiquitin-specific protease [Mus musculus]
Length = 962
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 362 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 479 L---PLPLKKDRIMEVFLVP 495
>gi|384941532|gb|AFI34371.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|380790487|gb|AFE67119.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
gi|383411117|gb|AFH28772.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|307205721|gb|EFN83966.1| Ubiquitin carboxyl-terminal hydrolase 33 [Harpegnathos saltator]
Length = 764
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE---NY--RHCKSPLVHRFGDLTRKIWH 246
VGL NI T ++N +Q+L ++PL FFL NY + K L + +L R +W+
Sbjct: 185 VGLQNIGNTCYMNAALQALSNISPLTQFFLDCSPMVNYMSKDRKPGLSVSYLNLIRDMWN 244
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
R +G V PH L + + FR Q + EF+ ++ LH +L+
Sbjct: 245 KRT-RGYVVPHGILSGI-RTVHPMFRGYHQHDTQEFLRCFMDQLHEELK 291
>gi|60360166|dbj|BAD90302.1| mKIAA4155 protein [Mus musculus]
Length = 747
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 315 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 374
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 375 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 431
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 432 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 491
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 492 L---PLPLKKDRIMEVFLVP 508
>gi|164519045|ref|NP_035808.2| ubiquitin carboxyl-terminal hydrolase 4 [Mus musculus]
gi|342187118|sp|P35123.3|UBP4_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein
gi|26354498|dbj|BAC40877.1| unnamed protein product [Mus musculus]
gi|74140411|dbj|BAE42357.1| unnamed protein product [Mus musculus]
gi|74146936|dbj|BAE25450.1| unnamed protein product [Mus musculus]
gi|74199576|dbj|BAE41468.1| unnamed protein product [Mus musculus]
gi|74211684|dbj|BAE29198.1| unnamed protein product [Mus musculus]
gi|148689335|gb|EDL21282.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b [Mus
musculus]
Length = 962
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 362 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 479 L---PLPLKKDRIMEVFLVP 495
>gi|403280795|ref|XP_003931895.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Saimiri
boliviensis boliviensis]
Length = 1119
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|297701928|ref|XP_002827948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pongo abelii]
Length = 1124
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 123 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 182
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 183 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 241
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 242 VHQIFGGYL 250
>gi|426346503|ref|XP_004040916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Gorilla
gorilla gorilla]
Length = 1123
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|410222778|gb|JAA08608.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410266542|gb|JAA21237.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410297248|gb|JAA27224.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410340693|gb|JAA39293.1| ubiquitin specific peptidase 36 [Pan troglodytes]
Length = 1123
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|397494913|ref|XP_003818312.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Pan paniscus]
Length = 1122
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|292615153|ref|XP_002662557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Danio
rerio]
Length = 958
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +FL EN + + + DL ++
Sbjct: 268 CGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADLVKQ 327
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W +R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 328 MWLSRS--SYVAPRTFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 384
Query: 304 IYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+G + V KE N ND G + E S++ PF L
Sbjct: 385 ALRDAEGRPDEIVAKEAWANHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLT 444
Query: 357 LDLP 360
L LP
Sbjct: 445 LPLP 448
>gi|410052277|ref|XP_001146571.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pan
troglodytes]
Length = 1037
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|334323020|ref|XP_001371102.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Monodelphis
domestica]
Length = 1133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R+C + + A N
Sbjct: 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGGFCMLCVMQNHMIQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ ++++ + ++ L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYIIDAMQKACLNGYTKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|297606766|ref|NP_001058936.2| Os07g0160000 [Oryza sativa Japonica Group]
gi|255677531|dbj|BAF20850.2| Os07g0160000 [Oryza sativa Japonica Group]
Length = 911
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +IQ L + L ++FL N L FG+L R++
Sbjct: 262 IGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRL 321
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
W+ + VSPH F +A + +F Q + E +++LL+ LH DL K
Sbjct: 322 WNTE--RKPVSPHHF-KAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVK 372
>gi|22831079|dbj|BAC15941.1| putative ubiquitin C-terminal hydrolase [Oryza sativa Japonica
Group]
Length = 951
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +IQ L + L ++FL N L FG+L R++
Sbjct: 262 IGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRL 321
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
W+ + VSPH F +A + +F Q + E +++LL+ LH DL K
Sbjct: 322 WNTE--RKPVSPHHF-KAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVK 372
>gi|222636464|gb|EEE66596.1| hypothetical protein OsJ_23160 [Oryza sativa Japonica Group]
Length = 885
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +IQ L + L ++FL N L FG+L R++
Sbjct: 262 IGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRL 321
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
W+ + VSPH F +A + +F Q + E +++LL+ LH DL K
Sbjct: 322 WNTE--RKPVSPHHF-KAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVK 372
>gi|429863441|gb|ELA37892.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum
gloeosporioides Nara gc5]
Length = 1628
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
VGL N+ T ++N +Q + V L +FL E N K + +G+L ++
Sbjct: 584 VGLQNLGNTCYMNSALQCVRSVEELTKYFLTGEYEKEINKANALGYKGQVAMAYGNLLKE 643
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
I+ +G VSP +F V +A + F+ Q + EF+ +LL+ L DL KK I
Sbjct: 644 IYAES--RGAVSPRDFKNTVGRA-RSTFQGWGQQDTQEFLGFLLDALQEDLSRIKKKPYI 700
>gi|218199123|gb|EEC81550.1| hypothetical protein OsI_24972 [Oryza sativa Indica Group]
Length = 885
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +IQ L + L ++FL N L FG+L R++
Sbjct: 262 IGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRL 321
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
W+ + VSPH F +A + +F Q + E +++LL+ LH DL K
Sbjct: 322 WNTE--RKPVSPHHF-KAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVK 372
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 175 LPDGYEINDP-SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENY 226
L +GY + SL + VGL N+ T F+N IQ L LR++ + +
Sbjct: 53 LSNGYNTDSSTSLSNRGIVGLRNLGNTCFMNSVIQCLSNTRLLRDYCRRDEHKDEVNKTT 112
Query: 227 RHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWL 286
+ K L++ F +L IW VSP++F + + + KRF Q + EF+ +L
Sbjct: 113 SNMKGALINAFANLMHSIWKGAP-DTHVSPNDFKSQIARFA-KRFVGYNQQDAQEFLMYL 170
Query: 287 LNTLHSDLRNTK-KNTSIIYECFQGELEVVKEIPKNTISGND 327
L LH D+ K K + IY+ + +E+ K + ND
Sbjct: 171 LEGLHEDVNRVKEKRKNRIYDEDDSKTVSAQEMWKMYLHQND 212
>gi|156380826|ref|XP_001631968.1| predicted protein [Nematostella vectensis]
gi|156219017|gb|EDO39905.1| predicted protein [Nematostella vectensis]
Length = 1526
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 39/158 (24%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--------KSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL FF +Y K + R+GDL
Sbjct: 656 TGLSNLGNTCFMNSALQCLSNTQPLTQFFTAKCHYYELNRTNPLGMKGHIARRYGDLVED 715
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--------- 294
+W + ++P + L+ + RF Q + EF+S+LL+ LH DL
Sbjct: 716 LWSGSS--RSLAPLK-LRWTIGRYAPRFNGFQQHDAQEFLSFLLDGLHEDLNRVHDKPYV 772
Query: 295 -------------------RNTKKNTSIIYECFQGELE 313
+ K+N SII + FQG+L+
Sbjct: 773 ELKDSDGRLDEIVAQEAWDNHIKRNQSIIVDLFQGQLK 810
>gi|194751941|ref|XP_001958282.1| GF23599 [Drosophila ananassae]
gi|190625564|gb|EDV41088.1| GF23599 [Drosophila ananassae]
Length = 1748
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N + L R+ +L ++
Sbjct: 740 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFELNATNKLGTRGQLAMRYAELLKE 799
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKK 299
+W A V+P + V K + + F G Q + E + WLL+ LH DL R T+K
Sbjct: 800 VWTATT--RSVAPLKLRFCVNKHAPQ-FAGGGQHDSQELLEWLLDALHEDLNRVTEK 853
>gi|242084278|ref|XP_002442564.1| hypothetical protein SORBIDRAFT_08g022020 [Sorghum bicolor]
gi|241943257|gb|EES16402.1| hypothetical protein SORBIDRAFT_08g022020 [Sorghum bicolor]
Length = 890
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
GL+N+ T F+N +Q L + L ++FL P N K L FGDL RK+
Sbjct: 276 TGLDNLGNTCFMNSAVQCLAHTSKLVDYFLGDFHKEINPHNPLGMKGELACAFGDLLRKL 335
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
W + V+P +F ++ + +F Q + E +++LL+ LH DL K
Sbjct: 336 WAID--RTPVAPRQF-KSRLGRFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVK 386
>gi|326668740|ref|XP_002662556.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Danio
rerio]
Length = 1009
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +FL EN + + + DL ++
Sbjct: 319 CGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADLVKQ 378
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W +R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 379 MWLSRS--SYVAPRTFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 435
Query: 304 IYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+G + V KE N ND G + E S++ PF L
Sbjct: 436 ALRDAEGRPDEIVAKEAWANHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLT 495
Query: 357 LDLP 360
L LP
Sbjct: 496 LPLP 499
>gi|195128583|ref|XP_002008742.1| GI11648 [Drosophila mojavensis]
gi|193920351|gb|EDW19218.1| GI11648 [Drosophila mojavensis]
Length = 1765
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N + L R+ +L ++
Sbjct: 736 TGLHNLGNTCFMNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYAELLKE 795
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 796 VWTATT--RSVAPLKLRFCVNKHAPQ-FAGGGQHDSQELLEWLLDALHEDL 843
>gi|449437492|ref|XP_004136526.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like [Cucumis sativus]
Length = 602
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 17/182 (9%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKIW 245
GL N+ T F+N +Q L+ L ++FL +N K L FGDL RK+W
Sbjct: 5 GLQNLGNTCFMNSALQCLVHTPKLVDYFLGNFQKEINYDNPLGMKGELALAFGDLLRKLW 64
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
+ P + + +F Q + EF+S+LL+ LH DL K
Sbjct: 65 AP---GSKSVPPRMFKLKLANFAPQFSGYNQHDSQEFLSFLLDGLHEDLNRVKCKPYFEA 121
Query: 306 ECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGLD 358
+ +G + EV +E +N ++ ND G + +++ PF+ L L
Sbjct: 122 KDVEGRRDEEVAEEYWQNHLARNDSIIVDLCQGQYRSTLVCPACNKLSVTFDPFMYLSLP 181
Query: 359 LP 360
LP
Sbjct: 182 LP 183
>gi|395825848|ref|XP_003786132.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Otolemur
garnettii]
Length = 1120
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 121 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSREHARSCHQGSFCMLCVMQNHIVQAFANS 180
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 181 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 239
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 240 VHQIFGGYL 248
>gi|321460140|gb|EFX71185.1| hypothetical protein DAPPUDRAFT_228023 [Daphnia pulex]
Length = 387
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 132 NVYACL--VCGKYYQGRGQKSHAYTHSLEAGHH-VYINLRTEKVYCLPDGYEI----NDP 184
N++ CL C G K H+ H + +H +++NL T +++C E+ NDP
Sbjct: 56 NLWLCLHSKCYLILCGETHKDHSSDHFQDYNNHCLHLNLTTFRIWCYKCEGEMFPLNNDP 115
Query: 185 SL----------------------EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL- 221
++ E VGL N+ T ++N +Q+L V P+ +FL
Sbjct: 116 AISQNLLTLFSQENTSDQLMRLRCETQGIVGLQNLGNTCYLNAALQALSNVPPMTQYFLE 175
Query: 222 -IPENYRH---CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+P + ++ L + L + +W + N ++P L AV K + FR Q
Sbjct: 176 CMPSTDKDKEVKRTSLAKAYRTLIQNVW-SENPPSSIAPTSVLYAV-KLVFQMFRGFQQH 233
Query: 278 NPVEFMSWLLNTLHSDLR 295
+ EF+ ++ LH +L+
Sbjct: 234 DSQEFLRCFMDQLHEELK 251
>gi|395533332|ref|XP_003768714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sarcophilus
harrisii]
Length = 1142
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R+C + + A N
Sbjct: 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGGFCMLCVMQNHMIQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ ++++ + ++ L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYIIDAMQKACLNGYTKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|198466499|ref|XP_001354019.2| GA20997 [Drosophila pseudoobscura pseudoobscura]
gi|198150628|gb|EAL29756.2| GA20997 [Drosophila pseudoobscura pseudoobscura]
Length = 1775
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N + L R+ +L ++
Sbjct: 739 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFELNAANKLGTRGQLAMRYAELLKE 798
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 799 VWTATT--RSVAPLKLRFCVNKHAPQ-FAGGGQHDTQELLEWLLDALHEDL 846
>gi|414586949|tpg|DAA37520.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 239
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLTRK 243
R+ GL N T + N +Q+L P R L E Y + K+P L+ DL +
Sbjct: 23 RYFGLENFGNTCYCNSVLQALYFCIPFREQLL--EYYANNKTPGDVEENLLTCLADLFMQ 80
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
I A+ G ++P F+Q V K + FR + + EF+++LLN L
Sbjct: 81 ISQAKKKTGVIAPKRFVQRV-KKQNELFRSYMHQDAHEFLNFLLNEL 126
>gi|340507518|gb|EGR33463.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 348
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSP------LVHRFGDLTRK 243
VGL N++ T F+N +Q L V PL ++F + E + KSP + + F +L +
Sbjct: 32 VGLKNLQNTCFLNSAVQCLSNVPPLCDYFFSKLHEKEINKKSPFGSKGQITNSFANLLLQ 91
Query: 244 IWHA-RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
+W + +NF +SP FL V+ K +F G Q + EF+ +LL+ LH
Sbjct: 92 LWQSNQNF---ISPVNFLN-VLYNQKCQFIDGTQQDSHEFLIYLLDILH 136
>gi|440804466|gb|ELR25343.1| Ubiquitin carboxylterminal hydrolase 15, putative [Acanthamoeba
castellanii str. Neff]
Length = 1164
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPE-NYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L PL NFFL + E N K LV + L R+I
Sbjct: 369 GLQNLGNTCFMNSALQCLSNTAPLTNFFLRGTYKDDVNEVNPLGTKGELVEAYTGLLREI 428
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + +P + ++ +F Q + E + +LL+ +H DL K+ +
Sbjct: 429 WSG---SARSTPPRSFKYKLERFAPQFSGYQQHDSQELLGFLLDGIHEDLNRIKQKPYVE 485
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ G + EV +E + + ND G I E S++ PF+ L L
Sbjct: 486 SKEADGRPDTEVAEETWQGHRARNDSVIVDRFQGQLKSTLICPECSKVSITFDPFMYLSL 545
Query: 358 DLP 360
LP
Sbjct: 546 PLP 548
>gi|345492284|ref|XP_001603431.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Nasonia
vitripennis]
Length = 864
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL NI T ++N +Q+L V PL FFL + R K L + +L R++W+
Sbjct: 187 VGLQNIGNTCYMNSALQALSNVPPLTQFFLDCAHMVSYVARDRKPGLSLSYLNLIREMWN 246
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
R +G PH L + + FR Q + EF+ ++ LH +L+
Sbjct: 247 KRT-RGYTVPHAILTGI-RTVHPMFRGYHQHDTQEFLRCFMDQLHEELK 293
>gi|328778708|ref|XP_001122214.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like, partial
[Apis mellifera]
Length = 867
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL NI T ++N +Q+L V PL FFL + + K L + +L R +W+
Sbjct: 136 VGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDMWN 195
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
R +G V PH L + + FR Q + EF+ ++ LH +L+
Sbjct: 196 -RKTRGYVVPHGILSGI-RTVHPMFRGYHQHDTQEFLRCFMDQLHEELK 242
>gi|195379442|ref|XP_002048488.1| GJ11329 [Drosophila virilis]
gi|194155646|gb|EDW70830.1| GJ11329 [Drosophila virilis]
Length = 1765
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N + L R+ +L ++
Sbjct: 735 TGLHNLGNTCFMNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYAELLKE 794
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 795 VWTATT--RSVAPLKLRFCVNKHAPQ-FAGGGQHDSQELLEWLLDALHEDL 842
>gi|357163877|ref|XP_003579876.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Brachypodium distachyon]
Length = 368
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLTRK 243
R+ GL N T + N +Q+L TP R L E Y + KSP L+ DL +
Sbjct: 23 RYFGLENFGNTCYCNSVLQALYFCTPFREQLL--EYYANNKSPGDAEENLLTCLADLFMQ 80
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
+ ++ G ++P F+Q V K + FR + + EF+++LLN L
Sbjct: 81 VSQSKKKTGVIAPKRFVQRV-KKQNELFRSYMHQDAHEFLNFLLNEL 126
>gi|348678861|gb|EGZ18678.1| hypothetical protein PHYSODRAFT_346365 [Phytophthora sojae]
Length = 1168
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 184 PSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----------IPENYRH---- 228
P+ E + VGL N+ T F+N +Q L+ PLR++FL E RH
Sbjct: 526 PTFEGV--VGLRNLGNTCFMNSMLQCLINTAPLRDYFLEKDPETGSPFFTKEINRHNPLG 583
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
K + F L RKIW V+P L++V+ +F Q + E M++LL+
Sbjct: 584 MKGIMAVEFASLLRKIWSGEF--TVVAPTS-LKSVIGQYAPQFAGYQQQDSQELMNFLLD 640
Query: 289 TLHSDLRNTK 298
LH DL K
Sbjct: 641 GLHEDLNRVK 650
>gi|345319072|ref|XP_001520693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36
[Ornithorhynchus anatinus]
Length = 989
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + + N
Sbjct: 124 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHSRSCAPGGFCMLCVMQNHMIQTFANS 183
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + H+ L + T++
Sbjct: 184 GNAIKPFSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLNGHAKLDRQTQATTL 242
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 243 VHQIFGGYL 251
>gi|189517356|ref|XP_688241.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Danio rerio]
Length = 1104
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQSGFCMICVMQNHIIQAFANT 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 ANAIKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|390463858|ref|XP_003733115.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Callithrix jacchus]
Length = 1124
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F N TIQ L PL N+ L E+ R C + I A N
Sbjct: 121 AGLHNLGNTCFFNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 180
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 181 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 239
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 240 VHQIFGGYL 248
>gi|195354286|ref|XP_002043629.1| GM19676 [Drosophila sechellia]
gi|194127797|gb|EDW49840.1| GM19676 [Drosophila sechellia]
Length = 1760
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F + N K L R+ +L ++
Sbjct: 741 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKE 800
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 801 VWTATT--RSVAPLKLRFCVNKYAPQ-FAGGGQHDSQELLEWLLDALHEDL 848
>gi|194874431|ref|XP_001973398.1| GG16065 [Drosophila erecta]
gi|190655181|gb|EDV52424.1| GG16065 [Drosophila erecta]
Length = 1760
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F + N K L R+ +L ++
Sbjct: 739 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKE 798
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 799 VWTATT--RSVAPLKLRFCVNKYAPQ-FAGGGQHDSQELLEWLLDALHEDL 846
>gi|380015099|ref|XP_003691548.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Apis
florea]
Length = 915
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL NI T ++N +Q+L V PL FFL + + K L + +L R +W+
Sbjct: 184 VGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDMWN 243
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
R +G V PH L + + FR Q + EF+ ++ LH +L+
Sbjct: 244 -RKTRGYVVPHGILSGI-RTVHPMFRGYHQHDTQEFLRCFMDQLHEELK 290
>gi|167533999|ref|XP_001748678.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772919|gb|EDQ86565.1| predicted protein [Monosiga brevicollis MX1]
Length = 1627
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 28/137 (20%)
Query: 183 DPSLEDIRHV--------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC----- 229
DPS D RH GL+N+ T ++N +Q L +PL+ +F E+Y H
Sbjct: 640 DPSTVD-RHTLLKSDGITGLSNLGNTCYMNAALQCLNHTSPLKAYF---EHYHHLAELNM 695
Query: 230 ------KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFM 283
+ + R+GDL ++ R V+P +F AV K + +RF Q + E +
Sbjct: 696 DNVLGYQGIIAKRYGDLILQLSEGRR---SVAPVKFRAAVQKYA-ERFSGNQQHDSQELL 751
Query: 284 SWLLNTLHSDL-RNTKK 299
+++L+ LH DL R T+K
Sbjct: 752 AFVLDALHEDLNRVTEK 768
>gi|442633504|ref|NP_001262075.1| CG8334, isoform C [Drosophila melanogaster]
gi|440216035|gb|AGB94768.1| CG8334, isoform C [Drosophila melanogaster]
Length = 1696
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F + N K L R+ +L ++
Sbjct: 677 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKE 736
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 737 VWTATT--RSVAPLKLRFCVNKYAPQ-FAGGGQHDSQELLEWLLDALHEDL 784
>gi|118367493|ref|XP_001016960.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89298727|gb|EAR96715.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 1170
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
VG++N+ T F+N +Q L+ V PL ++FL N K + + F DL
Sbjct: 74 VGISNLGNTCFINSALQCLLNVQPLMDYFLSDLHNQEVNTNNPLGSKGKVTYAFADLVNM 133
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH 291
IW N + P FL + + S F G Q + EF+ +LL+ LH
Sbjct: 134 IWCQNN--KYIVPKVFLNTIQQFS-AIFGDGSQQDSQEFLIFLLDLLH 178
>gi|195591649|ref|XP_002085551.1| GD14834 [Drosophila simulans]
gi|194197560|gb|EDX11136.1| GD14834 [Drosophila simulans]
Length = 1760
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F + N K L R+ +L ++
Sbjct: 741 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKE 800
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 801 VWTATT--RSVAPLKLRFCVNKYAPQ-FAGGGQHDSQELLEWLLDALHEDL 848
>gi|170086692|ref|XP_001874569.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649769|gb|EDR14010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 145 GRGQKSHAYTHSLEAGHHVYINLRTEKV-YCLPDGYEINDPSLEDIRHVGLNNIKETDFV 203
GR + + T S ++G Y L ++ + L G I +LE +GL N+ T F+
Sbjct: 361 GRKTLASSTTSSYKSGGDFYSGLSSKSSGFPLSTGKSITK-ALEP-GTLGLGNMGNTCFM 418
Query: 204 NVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVS 255
N +Q L L ++FL P N + FG L +IW S
Sbjct: 419 NSALQCLAHTKELSDYFLTGVFQDELNPGNPLGMGGAIAEVFGALLERIWATEGPSNSYS 478
Query: 256 PHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG--ELE 313
P EF + ++ +F Q + E +++LL+ LH DL K + ++G LE
Sbjct: 479 PREF-KTQLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWEGGDHLE 537
Query: 314 VVK 316
+V+
Sbjct: 538 LVR 540
>gi|442633502|ref|NP_001262074.1| CG8334, isoform B [Drosophila melanogaster]
gi|440216034|gb|AGB94767.1| CG8334, isoform B [Drosophila melanogaster]
Length = 1715
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F + N K L R+ +L ++
Sbjct: 677 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKE 736
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 737 VWTATT--RSVAPLKLRFCVNKYAPQ-FAGGGQHDSQELLEWLLDALHEDL 784
>gi|383864033|ref|XP_003707484.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Megachile
rotundata]
Length = 915
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL NI T ++N +Q+L V PL FFL + + K L + +L R +W+
Sbjct: 184 VGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDMWN 243
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
R +G V PH L + + FR Q + EF+ ++ LH +L+
Sbjct: 244 -RKTRGYVVPHGILSGI-RTVHPMFRGYHQHDTQEFLRCFMDQLHEELK 290
>gi|118404614|ref|NP_001072879.1| ubiquitin specific peptidase 19 [Xenopus (Silurana) tropicalis]
gi|116487747|gb|AAI25669.1| hypothetical protein MGC145127 [Xenopus (Silurana) tropicalis]
Length = 1435
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTRK 243
GL N+ T F+N IQSL LR++F E+ +C +PL F L R
Sbjct: 626 TGLVNLGNTCFMNSVIQSLSNTRELRDYFQDRSFESEINCNNPLGTGGRLAVSFAVLLRA 685
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W + Q S L+A++ + +F Q + EFM++LL+ LH DL
Sbjct: 686 LWKGTHHAFQPSK---LKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDL 733
>gi|442633506|ref|NP_001262076.1| CG8334, isoform D [Drosophila melanogaster]
gi|440216036|gb|AGB94769.1| CG8334, isoform D [Drosophila melanogaster]
Length = 1693
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F + N K L R+ +L ++
Sbjct: 677 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKE 736
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 737 VWTATT--RSVAPLKLRFCVNKYAPQ-FAGGGQHDSQELLEWLLDALHEDL 784
>gi|308460004|ref|XP_003092311.1| CRE-CYK-3 protein [Caenorhabditis remanei]
gi|308253579|gb|EFO97531.1| CRE-CYK-3 protein [Caenorhabditis remanei]
Length = 1168
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHR---------FGDLTR 242
VGL N + N IQ L RV+PL +FL E+ K R + L R
Sbjct: 569 VGLVNYGNFCYRNAGIQCLARVSPLTQYFLEDEHLEDIKKANTRRKDAIETTIEYAKLLR 628
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
++W A+ K ++P++F A+ + + F Q + EF+++LL+ LH+ + K
Sbjct: 629 EMWAAK--KKNIAPNDFNDAI-RMNSDMFECSEQHDCQEFVAFLLDQLHTSMYEANKT 683
>gi|24667051|ref|NP_649153.1| CG8334, isoform A [Drosophila melanogaster]
gi|23093095|gb|AAF49100.3| CG8334, isoform A [Drosophila melanogaster]
Length = 1736
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F + N K L R+ +L ++
Sbjct: 677 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKE 736
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 737 VWTATT--RSVAPLKLRFCVNKYAPQ-FAGGGQHDSQELLEWLLDALHEDL 784
>gi|212542035|ref|XP_002151172.1| RING and UBP finger domain protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210066079|gb|EEA20172.1| RING and UBP finger domain protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 755
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY 173
CSV S LN++ CL+CG GR ++HA+ H E H ++L T++V+
Sbjct: 482 CSVCHSELNLWVCLICGSIGCGRYDEAHAFAHFKETSHAFAMDLSTQRVW 531
>gi|195496105|ref|XP_002095552.1| GE19632 [Drosophila yakuba]
gi|194181653|gb|EDW95264.1| GE19632 [Drosophila yakuba]
Length = 1758
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F + N K L R+ +L ++
Sbjct: 741 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKE 800
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 801 VWTATT--RSVAPLKLRFCVNKYAPQ-FAGGGQHDSQELLEWLLDALHEDL 848
>gi|157820619|ref|NP_001100539.1| ubiquitin carboxyl-terminal hydrolase 36 [Rattus norvegicus]
gi|149054934|gb|EDM06751.1| ubiquitin specific protease 36 (predicted) [Rattus norvegicus]
Length = 1005
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + + A N
Sbjct: 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHMVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|442633508|ref|NP_001262077.1| CG8334, isoform E [Drosophila melanogaster]
gi|440216037|gb|AGB94770.1| CG8334, isoform E [Drosophila melanogaster]
Length = 1712
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F + N K L R+ +L ++
Sbjct: 677 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKE 736
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 737 VWTATT--RSVAPLKLRFCVNKYAPQ-FAGGGQHDSQELLEWLLDALHEDL 784
>gi|224066024|ref|XP_002192515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Taeniopygia
guttata]
Length = 904
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 23/199 (11%)
Query: 177 DGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRH 228
D ++ P L GL+N+ T F+N +Q L PL ++FL + N
Sbjct: 257 DSASLSQPGL-----CGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLG 311
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
+ + + DL +++W R + V+P F V + + + F Q + E +++LL+
Sbjct: 312 MRGEIAEAYADLIKQMWSGR--QSHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLD 368
Query: 289 TLHSDLRNTKKNTSIIYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE 346
LH DL KK + + G + EV KE +N ND G + +
Sbjct: 369 GLHEDLNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPK 428
Query: 347 TSRM-----PFLMLGLDLP 360
S++ PF L L LP
Sbjct: 429 CSKVSVTFDPFCYLTLPLP 447
>gi|169619313|ref|XP_001803069.1| hypothetical protein SNOG_12851 [Phaeosphaeria nodorum SN15]
gi|160703793|gb|EAT79651.2| hypothetical protein SNOG_12851 [Phaeosphaeria nodorum SN15]
Length = 1581
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS--PLVHRFGDLTRKIWHAR 248
HVGL N+ T ++N +Q L V L +FL + H + P+ H+ G + R
Sbjct: 606 HVGLTNLGNTCYMNSALQCLRSVEELSMYFLSGKWKGHINANNPIGHK-GAIARNYAAVL 664
Query: 249 ------NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
N SP F A+ KA+ G Q + EF+SWL++ LH DL +K
Sbjct: 665 SGIYDINASSSFSPKAFKNALGKANSLFSGYG-QQDSQEFVSWLVDALHEDLNRIQK 720
>gi|358370810|dbj|GAA87420.1| RING and UBP finger domain protein [Aspergillus kawachii IFO 4308]
Length = 707
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 112 NRQVLDFDFEKF-CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
N Q +D E CSV S++N++ CL+CG GR +HA+ H E H ++L T+
Sbjct: 426 NSQAALYDDEPAECSVCHSDINLWICLICGNVGCGRYDGAHAFAHYKETAHAFAMDLSTQ 485
Query: 171 KVY 173
+V+
Sbjct: 486 RVW 488
>gi|195078736|ref|XP_001997241.1| GH17697 [Drosophila grimshawi]
gi|193906143|gb|EDW05010.1| GH17697 [Drosophila grimshawi]
Length = 1065
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N + L R+ +L ++
Sbjct: 37 TGLHNLGNTCFMNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYSELLKE 96
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 97 VWTATT--RSVAPLKLRFCVNKHAPQ-FSGGGQHDSQELLEWLLDALHEDL 144
>gi|391328793|ref|XP_003738868.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Metaseiulus occidentalis]
Length = 334
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 184 PSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCKSPLVHRFGDLTR 242
PS E R++GL N T + N +Q+L P R L + + L+ DL
Sbjct: 16 PSTE--RYLGLVNFGNTCYCNSVLQALYYCKPFREKVLEYKAKNKRTRETLLTCLADLFH 73
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR--NTKKN 300
I + G ++P +F+ A ++ + F +Q + EF+++LLNT+ L+ + K
Sbjct: 74 NIHSHKKKTGTLAPKKFI-ARLRKDNEVFDNYLQQDAHEFLNYLLNTIGDLLQAESISKE 132
Query: 301 TSIIYECFQGEL-EVVKEIPKNTISGNDQN 329
S ++E FQG L + + TIS D++
Sbjct: 133 PSWVHEIFQGTLVNETRCLTCETISSKDED 162
>gi|348539075|ref|XP_003457015.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Oreochromis niloticus]
Length = 1629
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--LIPENYRHCKSPL------VHRFGDLTRK 243
GL N+ T F+N IQSL LR++F E +C +PL F L R
Sbjct: 742 TGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRAFEAEINCTNPLGTGGRLAISFAVLLRA 801
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W + Q S L+A++ + +F Q + EFM++LL+ LH DL
Sbjct: 802 LWKGTHHAFQPSK---LKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDL 849
>gi|157824037|ref|NP_001099563.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Rattus
norvegicus]
gi|149018537|gb|EDL77178.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_b [Rattus norvegicus]
Length = 914
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 255 CGLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 314
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 315 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 371
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 372 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 432 L---PLPLKKDRIMEVFLVP 448
>gi|68474276|ref|XP_718847.1| potential ubiquitin-specific protease [Candida albicans SC5314]
gi|46440639|gb|EAK99943.1| potential ubiquitin-specific protease [Candida albicans SC5314]
Length = 1372
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTR 242
H+GL+N+ T ++N +Q L+ V + +F I + + +PL + FG L +
Sbjct: 326 HLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGYHGDVANAFGSLLK 385
Query: 243 KIW-HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+ + H +N +SP EF + + S F +Q + E +SWLL+ LH DL
Sbjct: 386 QAFDHVKN-SSSISPREFKSTIGRYS-SMFSGYLQQDSQELLSWLLDALHEDL 436
>gi|68474445|ref|XP_718762.1| potential ubiquitin-specific protease [Candida albicans SC5314]
gi|46440549|gb|EAK99854.1| potential ubiquitin-specific protease [Candida albicans SC5314]
Length = 1354
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTR 242
H+GL+N+ T ++N +Q L+ V + +F I + + +PL + FG L +
Sbjct: 326 HLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGYHGDVANAFGSLLK 385
Query: 243 KIW-HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+ + H +N +SP EF + + S F +Q + E +SWLL+ LH DL
Sbjct: 386 QAFDHVKN-SSSISPREFKSTIGRYS-SMFSGYLQQDSQELLSWLLDALHEDL 436
>gi|410919011|ref|XP_003972978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Takifugu
rubripes]
Length = 1015
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 20/189 (10%)
Query: 156 SLEAGHHVYINLRTEK--VYCLP---DGYEINDPSLEDIRH--VGLNNIKETDFVNVTIQ 208
SL H+ N R K + LP + Y+ +D S R GL+N+ T F+N +Q
Sbjct: 247 SLTNNHNSSFNSRNVKNSSFSLPSYHNSYDYSDQSRPSERSGLCGLSNLGNTCFMNSAVQ 306
Query: 209 SLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFL 260
L + PL +FL +N K + + +L ++IW + V+P F
Sbjct: 307 CLSNIPPLTEYFLKDKYTDELNEDNPLGMKGEIARAYAELIKQIWSGK--YSYVTPRPFK 364
Query: 261 QAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEI 318
V + + + F Q + E +++LL+ LH DL +K I + G + V +E
Sbjct: 365 TQVGRFAPQ-FSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYIQLKDANGRPDKVVAEEA 423
Query: 319 PKNTISGND 327
+N I ND
Sbjct: 424 WENHIKRND 432
>gi|339247039|ref|XP_003375153.1| ubiquitin carboxyl- hydrolase 20 [Trichinella spiralis]
gi|316971532|gb|EFV55290.1| ubiquitin carboxyl- hydrolase 20 [Trichinella spiralis]
Length = 249
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------------LVHRFGDL 240
G+ N+ T ++N +Q+L PL + RHC P L F L
Sbjct: 46 GIQNLGNTCYLNAAVQALSNCPPLTEYM------RHCSLPCSSSPDGNRRNKLASEFQKL 99
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
+W ++ +SP F+ AV+ A FR+ Q + EF+ +LLN LH L+
Sbjct: 100 IDTLWDDE-YENMLSPIFFVDAVL-ACNPHFRLFQQQDTQEFLRFLLNELHEQLK 152
>gi|432857080|ref|XP_004068528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Oryzias
latipes]
Length = 998
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRKI 244
GL+N+ T F+N +Q L PL +FL EN + + + DL +++
Sbjct: 322 GLSNLGNTCFMNSALQCLSNAPPLTEYFLDDQYEAEINRENPLGMRGEIAEAYADLVKQM 381
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W +R+ V+P F V + + + F Q + E +++LL+ LH DL KK +
Sbjct: 382 WLSRS--SYVAPRTFKTQVGRFAPQ-FSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLA 438
Query: 305 YECFQGELE--VVKEIPKNTISGND 327
+G + V KE KN ND
Sbjct: 439 LRDAEGREDEIVAKEAWKNHRLRND 463
>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 403
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKS--PLVHRFGDLTRKIW 245
VGL N+ T F+N +Q L LR++ L I + +C+S L+ F LT+ +W
Sbjct: 59 VGLRNLGNTCFMNSILQCLSNTLELRDYCLRNCHITDLNNNCRSNTALIEEFAKLTQSLW 118
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+ N +SP EF V + + K F Q + EF+ +LL+ LH+++
Sbjct: 119 TSAN-NEPISPSEFRNQVQRCAPK-FVGCNQQDAQEFLRFLLDGLHNEV 165
>gi|444727561|gb|ELW68047.1| Ubiquitin carboxyl-terminal hydrolase 33 [Tupaia chinensis]
Length = 777
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 26/217 (11%)
Query: 102 RRDCPYLDTVNRQVLDFDFEK------FCSVSLSNLNVYACLVCGK-YYQGRGQKSHAYT 154
R CP+LD+V + +K + +V+L+ L V+ C C K + R +
Sbjct: 5 RNHCPHLDSVGEITKEDLIQKSHETKHYLTVNLTTLRVW-CYACSKEVFLDRKLGTQPSL 63
Query: 155 HSLEAGHHVYIN------------LRTEKVYCLPD-GYEINDPSLEDIRHV-GLNNIKET 200
+ H N L+T V D E+ + R + GL NI T
Sbjct: 64 PHVRQLHQTQENSVQDFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNT 123
Query: 201 DFVNVTIQSLMRVTPLRNFFLIPENY-RHCKSPLVHR-FGDLTRKIWHARNFKGQVSPHE 258
++N +Q+L PL FFL R K P + + + L ++WH ++ G V P
Sbjct: 124 CYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH-KSRPGSVVPTN 182
Query: 259 FLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
Q + K FR Q + EF+ L++ LH +L+
Sbjct: 183 LFQGI-KTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 218
>gi|145545853|ref|XP_001458610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426431|emb|CAK91213.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +IQ+L PL ++F+ PEN + +V F L R +
Sbjct: 69 GLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHIKEINPENPLSSQGNIVKSFAQLIRLL 128
Query: 245 W-----HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W + + + P +F+ V + F G Q + EF+++LL+ +H DL KK
Sbjct: 129 WQKVDQYQYDDMKVLKPTQFISTVGNYN-PIFAEGTQEDAHEFIAFLLDMIHEDLNRIKK 187
>gi|68533556|gb|AAH98528.1| Usp36 protein [Danio rerio]
Length = 914
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQSGFCMICVMQNHIIQAFANT 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 ANAIKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|344291363|ref|XP_003417405.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Loxodonta
africana]
Length = 1132
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHARSCHQGGFCMLCVMQNHIIQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|238878907|gb|EEQ42545.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1362
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTR 242
H+GL+N+ T ++N +Q L+ V + +F I + + +PL + FG L +
Sbjct: 326 HLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGYHGDVANAFGSLLK 385
Query: 243 KIW-HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+ + H +N +SP EF + + S F +Q + E +SWLL+ LH DL
Sbjct: 386 QAFDHVKN-SSSISPREFKSTIGRYS-SMFSGYLQQDSQELLSWLLDALHEDL 436
>gi|202070754|ref|NP_001128484.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Rattus
norvegicus]
gi|302595968|sp|B2GUZ1.1|UBP4_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|149018536|gb|EDL77177.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_a [Rattus norvegicus]
gi|183985839|gb|AAI66460.1| Usp4 protein [Rattus norvegicus]
Length = 961
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L PL +FL E N K + + +L ++
Sbjct: 302 CGLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQ 361
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R+ V+P F V + + + F Q + E ++++L+ LH DL KK +
Sbjct: 362 MWSGRD--THVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 418
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE +N ND G + E +++ PF L
Sbjct: 419 EPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 357 LDLPPPPLFKD-VMEKNIIP 375
L P PL KD +ME ++P
Sbjct: 479 L---PLPLKKDRIMEVFLVP 495
>gi|241949097|ref|XP_002417271.1| deubiquitinating enzyme 12, putative; ubiquitin carboxyl-terminal
hydrolase 12, putative; ubiquitin thiolesterase 12,
putative; ubiquitin-specific processing protease 12,
putative; ubiquitin-specific protease, putative [Candida
dubliniensis CD36]
gi|223640609|emb|CAX44887.1| deubiquitinating enzyme 12, putative [Candida dubliniensis CD36]
Length = 1309
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL------VHRFGDLTR 242
H+GL+N+ T ++N +Q L+ V + +F I + + +PL + FG L +
Sbjct: 325 HLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGYHGDVANAFGSLLK 384
Query: 243 KIW-HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
+ + H +N +SP EF + + S F +Q + E +SWLL+ LH DL K
Sbjct: 385 QAFDHVKN-GSSISPREFKSTIGRYSS-MFSGYLQQDSQELLSWLLDALHEDLNRIHK 440
>gi|350632448|gb|EHA20816.1| hypothetical protein ASPNIDRAFT_193467 [Aspergillus niger ATCC
1015]
Length = 550
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 112 NRQVLDFDFEKF-CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
N Q +D E CSV S++N++ CL+CG GR +HA+ H E H ++L T+
Sbjct: 271 NSQAALYDDEPAECSVCHSDINLWICLICGNVGCGRYDGAHAFAHYKETAHAFAMDLSTQ 330
Query: 171 KVY 173
+V+
Sbjct: 331 RVW 333
>gi|328863265|gb|EGG12365.1| ubiquitin-specific protease [Melampsora larici-populina 98AG31]
Length = 1194
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 185 SLED--IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC---------KSPL 233
S ED + GL N+ T ++N T+Q + PL FF +Y+ C K L
Sbjct: 859 SFEDGQVGMTGLKNLGNTCYMNSTLQCISATIPLARFFKD-GSYKRCINRVNPLGTKGAL 917
Query: 234 VHRFGDLTRKIWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
+L R +W A+ F VSP F +A+ + + + FR Q + EF+ +LL+ LH
Sbjct: 918 AETVAELVRMMWSAQYTF---VSPTIFREAICRFAPQ-FRGSDQHDAQEFLGFLLDGLHE 973
Query: 293 DL 294
DL
Sbjct: 974 DL 975
>gi|354477262|ref|XP_003500841.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Cricetulus griseus]
Length = 1203
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 485 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 544
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 545 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 601
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 602 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 661
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 662 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLIKPMQYKVIVPKI 721
>gi|351698096|gb|EHB01015.1| Ubiquitin carboxyl-terminal hydrolase 36 [Heterocephalus glaber]
Length = 1107
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 124 AGLHNLGNTCFLNATVQCLTYTPPLANYLLSREHSRSCHQGSFCMLCVMQNHIVQAFANS 183
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 184 GNAIKPISFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLSGYAKLDRQTQATTL 242
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 243 VHQIFGGYL 251
>gi|432866297|ref|XP_004070782.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Oryzias
latipes]
Length = 404
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 183 DPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK-----SPLVHRF 237
DP VGL NI T F+N +Q L LRN+ L+ ++Y+H K + L+ F
Sbjct: 54 DPLALGSGRVGLRNIGNTCFLNAVVQCLSHTRALRNYSLL-KSYKHEKFSKEDAKLMEAF 112
Query: 238 GDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+ +W + V P +F ++ K + F Q + EF+ +LL+ LH+++
Sbjct: 113 SKVLSGLWDVNDGDTVVHPRKFY-SIFKDAVPYFSGYSQQDAQEFLRFLLDKLHTEI 168
>gi|417411771|gb|JAA52312.1| Putative ubiquitin carboxyl-terminal hydrolase 21, partial
[Desmodus rotundus]
Length = 583
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 229 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 286
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++ +
Sbjct: 287 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPA 344
Query: 303 II 304
I+
Sbjct: 345 IL 346
>gi|195020247|ref|XP_001985155.1| GH14664 [Drosophila grimshawi]
gi|193898637|gb|EDV97503.1| GH14664 [Drosophila grimshawi]
Length = 1764
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N + L R+ +L ++
Sbjct: 737 TGLHNLGNTCFMNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYSELLKE 796
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W A V+P + V K + + F G Q + E + WLL+ LH DL
Sbjct: 797 VWTATT--RSVAPLKLRFCVNKHAPQ-FSGGGQHDSQELLEWLLDALHEDL 844
>gi|317038701|ref|XP_001402014.2| RING and UBP finger domain protein [Aspergillus niger CBS 513.88]
Length = 696
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 112 NRQVLDFDFEKF-CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
N Q +D E CSV S++N++ CL+CG GR +HA+ H E H ++L T+
Sbjct: 415 NSQAALYDDEPAECSVCHSDINLWICLICGNVGCGRYDGAHAFAHYKETAHAFAMDLSTQ 474
Query: 171 KVY 173
+V+
Sbjct: 475 RVW 477
>gi|410902504|ref|XP_003964734.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Takifugu
rubripes]
Length = 1050
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCHQSGFCMICVMQNHIIQAFANT 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLSGYPKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|431908709|gb|ELK12301.1| Ubiquitin carboxyl-terminal hydrolase 36 [Pteropus alecto]
Length = 1007
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL + L E+ R C+ + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLAGYLLSKEHSRSCRQGSFCMLCLMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|392891844|ref|NP_001254305.1| Protein F07A11.4, isoform b [Caenorhabditis elegans]
gi|387912084|emb|CCH63799.1| Protein F07A11.4, isoform b [Caenorhabditis elegans]
Length = 948
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE----NYRHCKSPLVHRFGDLTR 242
+ GL NI T F+N +Q L+ LR +FL PE N + L F D
Sbjct: 235 YTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMH 294
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-- 300
++W + + P + ++ ++ +F Q + EF+S+LL+ LH D+ KK
Sbjct: 295 QMWSGH--QKAIEPTQ-IKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPL 351
Query: 301 TSIIYECFQGELEVVKEIPKNTISGND 327
T + + +L+V E KN I ND
Sbjct: 352 TGTVESHGRHDLDVSNEAWKNHILRND 378
>gi|134074620|emb|CAK44653.1| unnamed protein product [Aspergillus niger]
Length = 668
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 112 NRQVLDFDFEKF-CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTE 170
N Q +D E CSV S++N++ CL+CG GR +HA+ H E H ++L T+
Sbjct: 387 NSQAALYDDEPAECSVCHSDINLWICLICGNVGCGRYDGAHAFAHYKETAHAFAMDLSTQ 446
Query: 171 KVY 173
+V+
Sbjct: 447 RVW 449
>gi|395331753|gb|EJF64133.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1301
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
+GL N+ T F+N +Q L+ L ++FL P+N S + FG + +
Sbjct: 407 LGLGNMGNTCFMNSALQCLVHTPELVDYFLTGVYQEELNPDNPLGMHSAIAQAFGAMLTR 466
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW + +P EF Q + + + + F Q + E +++LL+ LH DL K +
Sbjct: 467 IWDNESTLSSYTPREFKQTLQRFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYV 525
>gi|226496747|ref|NP_001146737.1| uncharacterized protein LOC100280339 [Zea mays]
gi|219888545|gb|ACL54647.1| unknown [Zea mays]
gi|223974199|gb|ACN31287.1| unknown [Zea mays]
gi|413918515|gb|AFW58447.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 368
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLTRK 243
R+ GL N T + N +Q+L P R L E Y + K+P L+ DL +
Sbjct: 23 RYFGLENFGNTCYCNSVLQALYFCIPFREQLL--EYYANNKTPGDAEENLLTCLADLFMQ 80
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
I A+ G ++P F+Q V K + FR + + EF+++LLN L
Sbjct: 81 ISQAKKKTGVIAPKRFVQRV-KKQNELFRSYMHQDAHEFLNFLLNEL 126
>gi|195624860|gb|ACG34260.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
Length = 368
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLTRK 243
R+ GL N T + N +Q+L P R L E Y + K+P L+ DL +
Sbjct: 23 RYFGLENFGNTCYCNSVLQALYFCIPFREQLL--EYYANNKTPGDAEENLLTCLADLFMQ 80
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
I A+ G ++P F+Q V K + FR + + EF+++LLN L
Sbjct: 81 ISQAKKKTGVIAPKRFVQRV-KKQNELFRSYMHQDAHEFLNFLLNEL 126
>gi|350416461|ref|XP_003490956.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Bombus
impatiens]
Length = 916
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL NI T ++N +Q+L V PL FFL + + K L + +L R +W+
Sbjct: 184 VGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDMWN 243
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
+ +G V PH L + + FR Q + EF+ ++ LH +L+
Sbjct: 244 KKT-RGYVVPHGILSGI-RTVHPMFRGYHQHDTQEFLRCFMDQLHEELK 290
>gi|339236929|ref|XP_003380019.1| ubiquitin carboxyl- hydrolase 4 [Trichinella spiralis]
gi|316977237|gb|EFV60365.1| ubiquitin carboxyl- hydrolase 4 [Trichinella spiralis]
Length = 802
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 182 NDPSLEDIRHV--------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY---RHCK 230
+ PSL +H+ GL N+ T F+N TIQ L + PL +FL E Y + K
Sbjct: 243 SSPSLPAAQHISLATPGLCGLTNLGNTCFMNSTIQCLSNIPPLSRYFL-SEQYIDELNEK 301
Query: 231 SPLVHR------FGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMS 284
+PL R + D+ +W R++ P F V + + F Q + E M+
Sbjct: 302 NPLGMRGELARAYADVICNMWSGRHYTYM--PRMFKNTVGRF-QPMFSGYQQQDSQELMA 358
Query: 285 WLLNTLHSDLRNTKKNTSII 304
+LL+ LH DL KK ++
Sbjct: 359 FLLDGLHEDLNRIKKKPYVV 378
>gi|259490298|ref|NP_001159183.1| uncharacterized protein LOC100304268 [Zea mays]
gi|195627604|gb|ACG35632.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
gi|223942511|gb|ACN25339.1| unknown [Zea mays]
gi|414586948|tpg|DAA37519.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 368
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLTRK 243
R+ GL N T + N +Q+L P R L E Y + K+P L+ DL +
Sbjct: 23 RYFGLENFGNTCYCNSVLQALYFCIPFREQLL--EYYANNKTPGDVEENLLTCLADLFMQ 80
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
I A+ G ++P F+Q V K + FR + + EF+++LLN L
Sbjct: 81 ISQAKKKTGVIAPKRFVQRV-KKQNELFRSYMHQDAHEFLNFLLNEL 126
>gi|410986643|ref|XP_003999619.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Felis catus]
gi|410986645|ref|XP_003999620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Felis catus]
gi|410986647|ref|XP_003999621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Felis catus]
Length = 566
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 212 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 269
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ + +
Sbjct: 270 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAAP 327
Query: 304 I 304
I
Sbjct: 328 I 328
>gi|326669890|ref|XP_002663119.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Danio rerio]
Length = 990
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTP-----LRNFFLIPENYRH---CKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L P L+N +L N+ + K + + D+ ++
Sbjct: 242 CGLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELNFSNPLGMKGEIAEAYADVIKQ 301
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W R++ V P F V + + F Q + E +S+LL+ LH DL KK I
Sbjct: 302 MWSGRHYS--VVPRVFKTKVGHFASQ-FLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYI 358
Query: 304 IYECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
G + EV +E +N + ND G + E +++ PF L
Sbjct: 359 ELRDADGRPDQEVAEEAWRNHLRRNDSVIVDTFHGLFKSTLVCPECNKVSVTFDPFCYLS 418
Query: 357 LDLP 360
+ LP
Sbjct: 419 VPLP 422
>gi|257050978|sp|Q9C585.2|UBP8_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; Short=AtUBP8; AltName:
Full=Ubiquitin thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
Length = 871
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N ++Q L L +FFL +N K + FGDL R +
Sbjct: 279 TGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSL 338
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W V+P F +A + +F Q + E +++LL+ LH DL K +
Sbjct: 339 WAPG--ASTVAPRTF-KAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVE 395
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQ---NTEKGSDGGDDHDNITTETSRM--PFLMLGL 357
+ G + EV E +N ++ ND + +G I + S M PF+ L L
Sbjct: 396 AKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSL 455
Query: 358 DLP 360
LP
Sbjct: 456 PLP 458
>gi|242076010|ref|XP_002447941.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
gi|241939124|gb|EES12269.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
Length = 368
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LVHRFGDLTRK 243
R+ GL N T + N +Q+L P R L E Y + K+P L+ DL +
Sbjct: 23 RYFGLENFGNTCYCNSVLQALYFCIPFREQLL--EYYANNKTPGDAEENLLTCLADLFMQ 80
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
I A+ G ++P F+Q V K + FR + + EF+++LLN L
Sbjct: 81 ISQAKKKTGVIAPKRFVQRV-KKQNELFRSYMHQDAHEFLNFLLNEL 126
>gi|223647442|gb|ACN10479.1| Ubiquitin carboxyl-terminal hydrolase 4 [Salmo salar]
Length = 1005
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L +PL +FL EN + + + DL ++
Sbjct: 320 CGLSNLGNTCFMNSALQCLSNASPLTEYFLDDQYEAEINRENPLGMRGEIAESYADLVKQ 379
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
+W +R+ V+P F V + + + F Q + E +++L++ LH DL KK +
Sbjct: 380 MWLSRS--SYVAPRTFKTQVGRFAPQ-FSGYQQQDSQELLAFLMDGLHEDLNRVKKKPYL 436
Query: 304 IYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
+ G + V KE N ND G + E +++ PF L
Sbjct: 437 ALQDAGGRKDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCPECAKVSVTFDPFCYLT 496
Query: 357 LDLP 360
L LP
Sbjct: 497 LPLP 500
>gi|340508522|gb|EGR34211.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
multifiliis]
Length = 547
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 182 NDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPL 233
N +L+ VGL N+ T ++N +Q L PL ++FL P + +
Sbjct: 71 NSQNLQIYGLVGLYNLGNTCYINAALQCLSNTPPLCDYFLSQLHEKEINPNAFLGSNGQI 130
Query: 234 VHRFGDLTRKIWHA-RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
+FG L +W +NF + P +F+ + + + ++F G Q + EF+++LL+ LH
Sbjct: 131 TSQFGKLILDLWQTDQNF---IEPIDFINEIGQFA-EQFADGTQQDSHEFLAFLLDILHE 186
Query: 293 DL 294
DL
Sbjct: 187 DL 188
>gi|384494007|gb|EIE84498.1| hypothetical protein RO3G_09208 [Rhizopus delemar RA 99-880]
Length = 837
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
GL N+ T ++N IQ L P +F+ EN+ L + F L R
Sbjct: 484 TGLKNLGNTCYMNSIIQCLSGTIPFARYFISGLYKQHINKENFLGTGGVLANEFATLLRS 543
Query: 244 IWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
+W A NF +SP +F +A+ + S + F+ Q + EF+++LL+ LH D KK S
Sbjct: 544 MWGANCNF---ISPVQFREAITQFSPQ-FKGSEQHDSQEFLNFLLDGLHEDCNLIKKRPS 599
>gi|291000604|ref|XP_002682869.1| ubiquitin-specific processing protease [Naegleria gruberi]
gi|284096497|gb|EFC50125.1| ubiquitin-specific processing protease [Naegleria gruberi]
Length = 1073
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 42/158 (26%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--------CKSPLVHRFGDLTRKI 244
GL N+ T F+N IQ L PL+N+F+ +H K L + F L +++
Sbjct: 468 GLRNLGNTCFMNSAIQCLSNTVPLKNYFISGLYAKHINTSNPLGTKGKLANNFASLIKEM 527
Query: 245 WH-ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--------- 294
W NF +P F A+ + + +F Q + E S+LL+ LH DL
Sbjct: 528 WSGGANF----TPTNFKYAISQFA-PQFSGYNQHDSQELTSYLLDGLHEDLNKVINKPYI 582
Query: 295 -------------------RNTKKNTSIIYECFQGELE 313
++ K+N S+I + FQG+L+
Sbjct: 583 EAKDYDGRPDEVIAKESWEQHLKRNDSVIVDLFQGQLK 620
>gi|126297738|ref|XP_001364410.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Monodelphis
domestica]
Length = 908
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 54/246 (21%)
Query: 102 RRDCPYLDT---VNRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTH 155
R C +LD+ V ++ L + C S N++ACL Y G G+ H+ H
Sbjct: 5 REICSHLDSIGEVTKEDLLLKSKGTCQSCGAGGPNLWACLQVACPYVGCGESFADHSTIH 64
Query: 156 SLEAGHHVYINLRTEKVYCL-------------------PDGYEINDPSL---------- 186
+ H++ +NL T +V+C P + + +L
Sbjct: 65 AQAKKHNLTVNLTTFRVWCYACEKEVFLDQRLAAHPPSPPSKFSEQETTLPSHPLKAVPI 124
Query: 187 ------------EDIRH---VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-IPENYRHCK 230
+D++ GL N+ + ++N +Q+L PL FFL R K
Sbjct: 125 AVADEGESESEDDDLKPRGLTGLKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDK 184
Query: 231 SP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
P L + L ++WH + V P + K FR Q + EF+ L++
Sbjct: 185 KPALCKSYQKLVSEVWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLMDQ 242
Query: 290 LHSDLR 295
LH +L+
Sbjct: 243 LHEELK 248
>gi|384498157|gb|EIE88648.1| hypothetical protein RO3G_13359 [Rhizopus delemar RA 99-880]
Length = 523
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 169 TEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH 228
T ++ +P +L + GL N+ T ++N IQ L P +F+ +H
Sbjct: 147 TSNIHQIPSSVFSQQGALIVVGTTGLKNLGNTCYMNSIIQCLSGTLPFARYFISGVFRQH 206
Query: 229 CKSP--------LVHRFGDLTRKIWHAR-NFKGQVSPHEFLQAVMKASKKRFRIGVQSNP 279
L +F DL R IW+ NF VSP F +A+++ + RF Q +
Sbjct: 207 VNRTNKLGTGGILTEKFADLLRAIWNENYNF---VSPMSFREAIIRFAP-RFSGTDQHDS 262
Query: 280 VEFMSWLLNTLHSDLRNTKKNTS 302
EF+++LL+ +H D+ N S
Sbjct: 263 QEFLTFLLDGIHEDVNLASHNHS 285
>gi|291233105|ref|XP_002736494.1| PREDICTED: deubiquitinating enzyme 1-like, partial [Saccoglossus
kowalevskii]
Length = 308
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 30/193 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F+N +Q L PL N+ L ++ + C+ +L R A +
Sbjct: 127 AGLMNLGNTCFLNSILQCLTYTPPLTNYLLSQQHSQSCREAGFCMMCELQRHAGRAFHQC 186
Query: 252 GQ-VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
G + P +Q + K K+FR G Q + EF+ + + + L K T++
Sbjct: 187 GSAIRPMVIIQKI-KNIGKQFRYGHQEDAHEFLRCVTEAMQKSCLVGYEKLEKHSKETTL 245
Query: 304 IYECFQGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPP 363
+++ F G ++ + N K + D HD PFL + LD+ P
Sbjct: 246 VHQIFGGYY-------RSRVQCN-----KCQEISDTHD---------PFLDISLDIKHVP 284
Query: 364 LFKDVMEKNIIPQ 376
+E+ I P+
Sbjct: 285 SIIKALERMIKPE 297
>gi|449501186|ref|XP_004161301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
sativus]
Length = 949
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L+ L ++FL +N K L FGDL RK+
Sbjct: 349 TGLQNLGNTCFMNSALQCLVHTPKLVDYFLGNFQKEINYDNPLGMKGELALAFGDLLRKL 408
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + P + + +F Q + EF+S+LL+ LH DL K
Sbjct: 409 WAP---GSKSVPPRMFKLKLANFAPQFSGYNQHDSQEFLSFLLDGLHEDLNRVKCKPYFE 465
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGL 357
+ +G + EV +E +N ++ ND G + +++ PF+ L L
Sbjct: 466 AKDVEGRRDEEVAEEYWQNHLARNDSIIVDLCQGQYRSTLVCPACNKLSVTFDPFMYLSL 525
Query: 358 DLP 360
LP
Sbjct: 526 PLP 528
>gi|261205774|ref|XP_002627624.1| RING and UBP finger domain-containing protein [Ajellomyces
dermatitidis SLH14081]
gi|239592683|gb|EEQ75264.1| RING and UBP finger domain-containing protein [Ajellomyces
dermatitidis SLH14081]
Length = 853
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 113 RQVLDFDFEKF---CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRT 169
R FDF++ C V S +N++ CL+CG GR ++HA+ H E H ++L +
Sbjct: 563 RAAQTFDFDQGPTECQVCHSEVNLWLCLICGNIGCGRYDEAHAFAHFKETSHAFAMDLAS 622
Query: 170 EKVY-CLPDGY 179
++V+ + DGY
Sbjct: 623 QRVWDYVGDGY 633
>gi|47219080|emb|CAG00219.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1113
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 123 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCHQSGFCMICVMQNHIIQAFANT 182
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 183 GNAIKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLSGYPKLDRQTQATTL 241
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 242 VHQIFGGYL 250
>gi|390345682|ref|XP_003726385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32
[Strongylocentrotus purpuratus]
Length = 1718
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 39/158 (24%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q + PLR +F L P N K L R+GDL
Sbjct: 779 TGLSNLGNTCFMNSAVQCISNTQPLRLYFQTKSYLYELNPTNPLGMKGHLAKRYGDLCND 838
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK----- 298
+W ++P + + K + RF Q + E +++LL+ LH DL
Sbjct: 839 LWSGT--ARSIAPLKLRWTIAKYA-PRFSGFQQHDSQELLAFLLDGLHEDLNRVHEKPYV 895
Query: 299 -----------------------KNTSIIYECFQGELE 313
+N S+I + FQG+L+
Sbjct: 896 ELKDSDGRPDEEVATEAWENHLIRNKSVIVDLFQGQLK 933
>gi|297787764|pdb|3MTN|A Chain A, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
gi|297787766|pdb|3MTN|C Chain C, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
Length = 373
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 22 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 79
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 80 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 137
Query: 303 II 304
I+
Sbjct: 138 IL 139
>gi|242769899|ref|XP_002341867.1| RING and UBP finger domain protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218725063|gb|EED24480.1| RING and UBP finger domain protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 754
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY 173
CSV S LN++ CL+CG GR ++HA+ H E H ++L T++V+
Sbjct: 484 CSVCHSELNLWICLICGSIGCGRYDEAHAFAHFKETSHAFAMDLSTQRVW 533
>gi|395729514|ref|XP_002809941.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pongo abelii]
Length = 594
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 240 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 297
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 298 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 355
Query: 303 II 304
I+
Sbjct: 356 IL 357
>gi|340717142|ref|XP_003397046.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Bombus
terrestris]
Length = 935
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-----IPENYRHCKSPLVHRFGDLTRKIWH 246
VGL NI T ++N +Q+L V PL FFL + + K L + +L R +W+
Sbjct: 203 VGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDMWN 262
Query: 247 ARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLR 295
+ +G V PH L + + FR Q + EF+ ++ LH +L+
Sbjct: 263 KKT-RGYVVPHGILSGI-RTVHPMFRGYHQHDTQEFLRCFMDQLHEELK 309
>gi|397481302|ref|XP_003811887.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pan paniscus]
Length = 594
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 240 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 297
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 298 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 355
Query: 303 II 304
I+
Sbjct: 356 IL 357
>gi|348558248|ref|XP_003464930.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Cavia
porcellus]
Length = 1102
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATVQCLTYTPPLANYLLSREHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 182 GNAIKPISFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|390476931|ref|XP_002760234.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Callithrix jacchus]
Length = 565
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|330789588|ref|XP_003282881.1| hypothetical protein DICPUDRAFT_96224 [Dictyostelium purpureum]
gi|325087165|gb|EGC40545.1| hypothetical protein DICPUDRAFT_96224 [Dictyostelium purpureum]
Length = 1173
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPENYRHCKSPLVHRFGDLTRKIWHAR 248
GL+N+ T F N +Q+L V LR+ FL P + H SPL K++ +
Sbjct: 196 GLDNLGNTCFFNSIMQNLTHVNILRDIFLKEPGTPGSKIHTSSPLTMEMYYFFNKMYKTK 255
Query: 249 NFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT---KKNTSIIY 305
+ +SP + K S RFR Q + E + +LL+ L S+ +NT +K+ + I
Sbjct: 256 H--THISPTGLFSEICKKS-PRFRGFKQQDSHELLRYLLDGLISEEQNTTQRRKDPTYID 312
Query: 306 ECFQGEL 312
+ F G+L
Sbjct: 313 KIFGGQL 319
>gi|189238385|ref|XP_001811202.1| PREDICTED: similar to ubiquitin specific protease [Tribolium
castaneum]
Length = 1533
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 84/220 (38%), Gaps = 30/220 (13%)
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTP 215
+L AG ++ CLP G GL+N+ T F+N +Q++ P
Sbjct: 714 ALVAGGQTTLSAERRPTICLPPG------------ATGLHNLGNTCFMNAALQAVSNTRP 761
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKAS 267
L +F L N K + R+ +L R++W V+P + V K +
Sbjct: 762 LTLYFQRDGQLCELNSVNPLGTKGMVARRYAELCRELWAGST--RSVAPLKLRYCVTKHA 819
Query: 268 KKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEVVKEIPKNTISGN 326
G Q + E ++WLL+ LH DL R +K S + + EVV E
Sbjct: 820 P-HLGGGGQHDSQELLAWLLDALHEDLNRVARKQYSELKDSGGRPDEVVAEEAWVQHLAR 878
Query: 327 DQNTEKGSDGGDDHDNITTETSRM------PFLMLGLDLP 360
D + G +T +T PF +L L LP
Sbjct: 879 DHSIITDLFYGQLKSKVTCQTCGHESVRFDPFNLLSLPLP 918
>gi|448105860|ref|XP_004200605.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
gi|448109008|ref|XP_004201236.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
gi|359382027|emb|CCE80864.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
gi|359382792|emb|CCE80099.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
Length = 1309
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 165 INLRTEKVYCLPDGYEINDP---SLEDIRH----VGLNNIKETDFVNVTIQSLMRVTPLR 217
I ++ Y + D ++ DP S E I +GL+N+ T ++N +Q L+ + +
Sbjct: 253 IQDKSSHSYPIDDYFKTVDPDTFSAERITSSGGDLGLSNLGNTCYMNSALQCLLHIPEVN 312
Query: 218 NFFL--IPENYRHCKSPLVHR------FGDLTRKIW-HARNFK-GQVSPHEFLQAVMKAS 267
+F I E + +PL ++ FGDL K++ ++N VSP +F + + S
Sbjct: 313 YYFFYNIFEKELNTVNPLGYKGQIAKAFGDLLHKLFDQSKNDSFSAVSPRDFKFKIGQYS 372
Query: 268 KKRFRIGVQSNPVEFMSWLLNTLHSDL 294
FR Q + EF+SWLL+ LH DL
Sbjct: 373 S-VFRGYSQQDSQEFLSWLLDALHEDL 398
>gi|5669678|gb|AAD46422.1|AF105715_1 ubiquitous nuclear protein [Gallus gallus]
Length = 950
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 44/242 (18%)
Query: 173 YCLPD-----GYEINDPSLEDIRH------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
YCLP Y+ ++P RH GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPG----RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL 289
Query: 222 IP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+N + + + +L +++W + V+P F V + + + F
Sbjct: 290 NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSG 346
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTE 331
Q + E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 347 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV 406
Query: 332 KGSDGGDDHDNITTETSRM-----PFLMLGLDLPPP-----------PLFKDVMEKNIIP 375
G + E +++ PF L L LP PL K + K ++P
Sbjct: 407 DIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEESEMDPLAKPMQYKVVVP 466
Query: 376 QL 377
++
Sbjct: 467 KI 468
>gi|148707161|gb|EDL39108.1| ubiquitin specific peptidase 21, isoform CRA_b [Mus musculus]
Length = 566
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|195435576|ref|XP_002065756.1| GK19705 [Drosophila willistoni]
gi|194161841|gb|EDW76742.1| GK19705 [Drosophila willistoni]
Length = 1771
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRK 243
GL+N+ T F+N +Q L PL +F L N + L R+ +L ++
Sbjct: 741 TGLHNLGNTCFMNAALQVLFNTQPLAQYFQRQMHRFELNQTNKLGTRGQLAMRYSELLKE 800
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKK 299
+W A V+P + V K + + F G Q + E + WLL+ LH DL R T+K
Sbjct: 801 VWTATT--RSVAPLKLRFCVNKHAPQ-FAGGGQHDSQELLEWLLDALHEDLNRVTEK 854
>gi|351710726|gb|EHB13645.1| Ubiquitin carboxyl-terminal hydrolase 21 [Heterocephalus glaber]
Length = 565
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|270008551|gb|EFA04999.1| hypothetical protein TcasGA2_TC015078 [Tribolium castaneum]
Length = 1682
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 84/220 (38%), Gaps = 30/220 (13%)
Query: 156 SLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTP 215
+L AG ++ CLP G GL+N+ T F+N +Q++ P
Sbjct: 714 ALVAGGQTTLSAERRPTICLPPG------------ATGLHNLGNTCFMNAALQAVSNTRP 761
Query: 216 LRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKAS 267
L +F L N K + R+ +L R++W V+P + V K +
Sbjct: 762 LTLYFQRDGQLCELNSVNPLGTKGMVARRYAELCRELWAGST--RSVAPLKLRYCVTKHA 819
Query: 268 KKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSIIYECFQGELEVVKEIPKNTISGN 326
G Q + E ++WLL+ LH DL R +K S + + EVV E
Sbjct: 820 P-HLGGGGQHDSQELLAWLLDALHEDLNRVARKQYSELKDSGGRPDEVVAEEAWVQHLAR 878
Query: 327 DQNTEKGSDGGDDHDNITTETSRM------PFLMLGLDLP 360
D + G +T +T PF +L L LP
Sbjct: 879 DHSIITDLFYGQLKSKVTCQTCGHESVRFDPFNLLSLPLP 918
>gi|119573030|gb|EAW52645.1| ubiquitin specific peptidase 21, isoform CRA_d [Homo sapiens]
Length = 565
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|109017739|ref|XP_001117768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Macaca mulatta]
gi|410034003|ref|XP_524939.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 9 [Pan
troglodytes]
gi|426332415|ref|XP_004027801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Gorilla
gorilla gorilla]
Length = 565
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|301786749|ref|XP_002928787.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Ailuropoda melanoleuca]
gi|281352153|gb|EFB27737.1| hypothetical protein PANDA_018837 [Ailuropoda melanoleuca]
Length = 565
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|374073975|pdb|2Y5B|A Chain A, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
gi|374073977|pdb|2Y5B|E Chain E, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
Length = 370
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 16 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 73
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+WH + + V+P F +AV + F Q + EF+ L+ LH ++
Sbjct: 74 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEI 122
>gi|380471969|emb|CCF47017.1| ubiquitin carboxyl-terminal hydrolase, partial [Colletotrichum
higginsianum]
Length = 1676
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
VGL N+ T ++N +Q + V L +FL E N K + +G L ++
Sbjct: 624 VGLQNLGNTCYMNSALQCVRSVEELTKYFLTDEYKVELNKANPLGYKGQVAMAYGGLLKE 683
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
I+ +G VSP +F V +A + F+ Q + EF+ +LL+ L DL KK I
Sbjct: 684 IYAES--RGAVSPRDFKNTVGRA-RSTFQGWGQQDTQEFLGFLLDALQEDLSRIKKKPYI 740
>gi|224809307|ref|NP_038947.2| ubiquitin carboxyl-terminal hydrolase 21 [Mus musculus]
Length = 566
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|449686770|ref|XP_002169046.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Hydra
magnipapillata]
Length = 596
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 66/160 (41%), Gaps = 32/160 (20%)
Query: 153 YTHSLEAGHHVYIN-LRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLM 211
Y H A H V+ N + + + G ND SL + GL+N+ T F+N IQ L
Sbjct: 437 YRHMQPAKHSVFYNSVNINHLISMVSGN--NDHSLLEKGATGLHNLGNTCFMNSAIQCLS 494
Query: 212 RVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAV 263
PL +FL N K L ++GDLT +W F ++P
Sbjct: 495 NTNPLTKYFLSKFFLYELNKTNRLGMKGVLAKKYGDLTADLWSG--FYRSIAP------- 545
Query: 264 MKASKKRFRIG---------VQSNPVEFMSWLLNTLHSDL 294
K RF IG Q + E +S+LL+ LH DL
Sbjct: 546 ---VKLRFTIGKYAPCFNGFQQHDSQELLSFLLDGLHEDL 582
>gi|327356698|gb|EGE85555.1| RING and UBP finger domain-containing protein [Ajellomyces
dermatitidis ATCC 18188]
Length = 910
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 113 RQVLDFDFEKF---CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRT 169
R FDF++ C V S +N++ CL+CG GR ++HA+ H E H ++L +
Sbjct: 620 RAAQTFDFDQGPTECQVCHSEVNLWLCLICGNIGCGRYDEAHAFAHFKETSHAFAMDLAS 679
Query: 170 EKVY-CLPDGY 179
++V+ + DGY
Sbjct: 680 QRVWDYVGDGY 690
>gi|254575047|pdb|3I3T|A Chain A, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575048|pdb|3I3T|C Chain C, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575049|pdb|3I3T|E Chain E, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575050|pdb|3I3T|G Chain G, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
Length = 355
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 3 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 60
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+WH + + V+P F +AV + F Q + EF+ L+ LH ++
Sbjct: 61 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEI 109
>gi|326679111|ref|XP_689922.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Danio rerio]
Length = 1526
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--ENYRHCKSPL------VHRFGDLTRK 243
GL N+ T F+N IQSL LR++F E+ +C +PL F L R
Sbjct: 679 TGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRGFESEINCNNPLGTGGRLAIGFAVLLRA 738
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W + Q S L+A++ + +F Q + EFM++LL+ LH DL
Sbjct: 739 LWKGTHHAFQPSK---LKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDL 786
>gi|13374862|emb|CAC34496.1| ubiquitin-specific protease-like protein [Arabidopsis thaliana]
Length = 901
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N ++Q L L +FFL +N K + FGDL R +
Sbjct: 309 TGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSL 368
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W V+P F +A + +F Q + E +++LL+ LH DL K +
Sbjct: 369 WAPG--ASTVAPRTF-KAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVE 425
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQ---NTEKGSDGGDDHDNITTETSRM--PFLMLGL 357
+ G + EV E +N ++ ND + +G I + S M PF+ L L
Sbjct: 426 AKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSL 485
Query: 358 DLP 360
LP
Sbjct: 486 PLP 488
>gi|432865793|ref|XP_004070616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Oryzias
latipes]
Length = 1552
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF--LIPENYRHCKSPL------VHRFGDLTRK 243
GL N+ T F+N IQSL LR++F E +C +PL F L R
Sbjct: 743 TGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRAFEAEINCSNPLGTGGRLAIGFAVLLRA 802
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+W + Q S L+A++ + +F Q + EFM++LL+ LH DL
Sbjct: 803 LWKGTHHAFQPSK---LKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDL 850
>gi|403294063|ref|XP_003938024.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Saimiri
boliviensis boliviensis]
Length = 596
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 242 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 299
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 300 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 357
Query: 303 II 304
I+
Sbjct: 358 IL 359
>gi|34784440|gb|AAH57470.1| Usp36 protein [Danio rerio]
Length = 758
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQSGFCMICVMQNHIIQAFANT 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 ANAIKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|189207218|ref|XP_001939943.1| ubiquitin carboxyl-terminal hydrolase 19 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976036|gb|EDU42662.1| ubiquitin carboxyl-terminal hydrolase 19 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1849
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR--HCKSPLVHR------FGDLTR 242
HVGL N+ T ++N +Q L V L +FL + + +P+ H+ + L
Sbjct: 1003 HVGLTNLGNTCYMNSALQCLRSVEELSMYFLNNKWKEEINVDNPIGHKGVIAKSYAGLLN 1062
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
I+ N VSP +F Q + KA+ G Q + EF+SWL++ LH DL +K
Sbjct: 1063 AIFSLDN-NSAVSPKDFKQKLGKANTLFSGYG-QQDSQEFVSWLVDALHEDLNRIQK 1117
>gi|240256325|ref|NP_568411.4| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|240256327|ref|NP_851052.4| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|332005587|gb|AED92970.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|332005588|gb|AED92971.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
Length = 913
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N ++Q L L +FFL +N K + FGDL R +
Sbjct: 321 TGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSL 380
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W V+P F +A + +F Q + E +++LL+ LH DL K +
Sbjct: 381 WAPG--ASTVAPRTF-KAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVE 437
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQ---NTEKGSDGGDDHDNITTETSRM--PFLMLGL 357
+ G + EV E +N ++ ND + +G I + S M PF+ L L
Sbjct: 438 AKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSL 497
Query: 358 DLP 360
LP
Sbjct: 498 PLP 500
>gi|48257066|gb|AAH03130.2| USP21 protein, partial [Homo sapiens]
Length = 477
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 123 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 180
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 181 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 238
Query: 303 II 304
I+
Sbjct: 239 IL 240
>gi|62243586|ref|NP_001014443.1| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|74027267|ref|NP_036607.3| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|10720334|sp|Q9UK80.1|UBP21_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853113|gb|AAD54321.1|AF177758_1 ubiquitin specific protease 16 [Homo sapiens]
gi|119573029|gb|EAW52644.1| ubiquitin specific peptidase 21, isoform CRA_c [Homo sapiens]
gi|158258070|dbj|BAF85008.1| unnamed protein product [Homo sapiens]
gi|223460370|gb|AAI36292.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|355558658|gb|EHH15438.1| hypothetical protein EGK_01528 [Macaca mulatta]
gi|355745834|gb|EHH50459.1| hypothetical protein EGM_01292 [Macaca fascicularis]
gi|380811730|gb|AFE77740.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|383417519|gb|AFH31973.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|384946444|gb|AFI36827.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|410219870|gb|JAA07154.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410219872|gb|JAA07155.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410302294|gb|JAA29747.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410351841|gb|JAA42524.1| ubiquitin specific peptidase 21 [Pan troglodytes]
Length = 565
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|426216989|ref|XP_004002736.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2 [Ovis
aries]
Length = 592
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 238 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 295
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 296 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 353
Query: 303 II 304
I+
Sbjct: 354 IL 355
>gi|148707160|gb|EDL39107.1| ubiquitin specific peptidase 21, isoform CRA_a [Mus musculus]
Length = 451
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R + L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE--LTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|7363366|gb|AAF61308.1|AF233442_1 NEDD8-specific protease [Homo sapiens]
Length = 381
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 27 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 84
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+WH + + V+P F +AV + F Q + EF+ L+ LH ++
Sbjct: 85 LWHLDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEI 133
>gi|354489521|ref|XP_003506910.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Cricetulus griseus]
Length = 565
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|321475567|gb|EFX86529.1| hypothetical protein DAPPUDRAFT_307840 [Daphnia pulex]
Length = 1180
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFF---LIPENYRHCKSP-LVHRFGDLTRKIWHA 247
GL N+ T F+N +Q L+ PL N+F I + Y C S L +F K+W
Sbjct: 170 CGLRNLGNTCFMNAGLQCLINTPPLLNYFHSNSIDDQYIGCNSVHLTAQFAAFLLKMWSG 229
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNT--KKNTS 302
R + P EF + + +F+ Q + EF++ LL++LH L T K+ TS
Sbjct: 230 R--FSTLRPAEF-KHTLSLYHPQFKDYRQHDCQEFLALLLDSLHEHLSQTALKEGTS 283
>gi|301766030|ref|XP_002918424.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Ailuropoda melanoleuca]
Length = 1116
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R+C + + A N
Sbjct: 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGSFCMLCLMQNHMVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|10720332|sp|Q9QZL6.1|UBP21_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853115|gb|AAD54322.1|AF177759_1 ubiquitin specific protease 16 [Mus musculus]
gi|18257320|gb|AAH21903.1| Ubiquitin specific peptidase 21 [Mus musculus]
Length = 566
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|40788175|emb|CAE47744.2| ubiquitin specific proteinase 43 [Homo sapiens]
Length = 1124
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--KSPLVHRFGDLTRKIWHARNF 250
GL N T F+N +Q L L F + YR ++ + + L R +W R +
Sbjct: 102 GLKNHGNTCFMNAVVQCLSNTDLLAEFLAL-GRYRAAPGRAEVTEQLAALVRALW-TREY 159
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
Q+S EF Q + +F+ Q + +EF+ WLL+ +H DL + +
Sbjct: 160 TPQLS-AEFFQNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRG 208
>gi|326504080|dbj|BAK02826.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 370
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 181 INDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSP------LV 234
+ D E R+ GL N T + N +Q+L TP R L E Y + K+P L+
Sbjct: 14 LGDQFPEGERYFGLENFGNTCYCNSVLQALYFCTPFREQLL--EYYTNNKNPGDAEENLL 71
Query: 235 HRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL 290
DL ++ ++ G ++P F+Q V K + FR + + EF+++LLN L
Sbjct: 72 TCLADLFMQVSQSKKKTGVIAPKRFVQRV-KKQNELFRSYMHQDAHEFLNFLLNEL 126
>gi|281342803|gb|EFB18387.1| hypothetical protein PANDA_006891 [Ailuropoda melanoleuca]
Length = 1117
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R+C + + A N
Sbjct: 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGSFCMLCLMQNHMVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 756
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNF-----FLIPENYRHCKSPLV-HRFGDLTRKIW 245
VGLNN+ T F+N +Q L PL + FL N + L+ H + DL ++IW
Sbjct: 162 VGLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRFLKDINKSSSMNGLLFHSYADLMKEIW 221
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
SP F + + + RF Q + EF+ ++L LH ++ +K + I
Sbjct: 222 DPDMANSSTSPSRFKSQIQRFA-PRFMGYSQQDSQEFLRYVLEGLHMEVNRVQKRPNPIK 280
Query: 306 ECFQGE 311
++ E
Sbjct: 281 PDYEAE 286
>gi|194036892|ref|XP_001927817.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Sus
scrofa]
Length = 565
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|60552608|gb|AAH90946.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|345804557|ref|XP_540463.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Canis lupus
familiaris]
Length = 1116
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R+C + + A N
Sbjct: 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGSFCMLCVMQNHMVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|345797847|ref|XP_536136.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Canis lupus
familiaris]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|119573028|gb|EAW52643.1| ubiquitin specific peptidase 21, isoform CRA_b [Homo sapiens]
Length = 551
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|426216987|ref|XP_004002735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Ovis
aries]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|297280506|ref|XP_001117779.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 6
[Macaca mulatta]
Length = 595
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 241 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 298
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 299 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 356
Query: 303 II 304
I+
Sbjct: 357 IL 358
>gi|344287000|ref|XP_003415244.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Loxodonta
africana]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|431894059|gb|ELK03865.1| Ubiquitin carboxyl-terminal hydrolase 43 [Pteropus alecto]
Length = 1417
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--KSPLVHRFGDLTRKIWHARNF 250
GL N T F+N +Q L L F + YR ++ + + L R +W R +
Sbjct: 100 GLKNHGNTCFMNAVVQCLSNTDLLAEFLAL-GRYRAAPGRAEVTEQLAALVRALW-TREY 157
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
Q+S EF AV K + FR Q + +EF+ WLL+ +H DL + +
Sbjct: 158 TPQLS-AEFKNAVSKYGSQ-FRGNSQHDALEFLLWLLDRVHEDLEGSTR 204
>gi|296489875|tpg|DAA31988.1| TPA: ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|440893879|gb|ELR46495.1| Ubiquitin carboxyl-terminal hydrolase 21 [Bos grunniens mutus]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|355727944|gb|AES09362.1| ubiquitin specific peptidase 21 [Mustela putorius furo]
Length = 592
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 238 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 295
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 296 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 353
Query: 303 II 304
I+
Sbjct: 354 IL 355
>gi|348561662|ref|XP_003466631.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Cavia
porcellus]
Length = 566
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 212 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 269
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 270 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 327
Query: 303 II 304
I+
Sbjct: 328 IL 329
>gi|332219294|ref|XP_003258791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Nomascus
leucogenys]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|320165971|gb|EFW42870.1| DUB1 [Capsaspora owczarzaki ATCC 30864]
Length = 495
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFKG 252
GL+N+ T F+N +Q L PL ++ L + + C+ P + +L + I A +G
Sbjct: 206 GLSNMGNTCFLNSVLQCLTYTPPLASYALSGAHSQACRLPEICMCCELEQHIRRALVHRG 265
Query: 253 QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGEL 312
++P ++ + K FR+G Q + EF+ L+ ++ I + F GE
Sbjct: 266 NIAPKPIIRQLRKIGS--FRLGHQEDAHEFLRCLMESVQQS----------ILKSFGGEK 313
Query: 313 EVVKEIPKNTI 323
+ + + T+
Sbjct: 314 RIAHRVQETTL 324
>gi|149759807|ref|XP_001503883.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Equus caballus]
gi|149759809|ref|XP_001503880.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Equus caballus]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|392891842|ref|NP_001254304.1| Protein F07A11.4, isoform a [Caenorhabditis elegans]
gi|3875534|emb|CAA91317.1| Protein F07A11.4, isoform a [Caenorhabditis elegans]
Length = 1095
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL----IPE----NYRHCKSPLVHRFGDLTR 242
+ GL NI T F+N +Q L+ LR +FL PE N + L F D
Sbjct: 422 YTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMH 481
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-- 300
++W + + P + ++ ++ +F Q + EF+S+LL+ LH D+ KK
Sbjct: 482 QMWSGH--QKAIEPTQ-IKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPL 538
Query: 301 TSIIYECFQGELEVVKEIPKNTISGND 327
T + + +L+V E KN I ND
Sbjct: 539 TGTVESHGRHDLDVSNEAWKNHILRND 565
>gi|268531894|ref|XP_002631075.1| Hypothetical protein CBG02847 [Caenorhabditis briggsae]
Length = 1130
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPE-NYRHCKSPLVHRFGDLTR 242
+ GL NI T F+N +Q L+ LR FFL I E N + L F D
Sbjct: 414 YTGLRNIGNTCFMNAILQMLVNNVELREFFLRDHYKMEINESNPLGSEGRLARAFADFMV 473
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN-- 300
++W+ R+ + P ++ ++ +F Q + EF+S+LL+ LH D+ KK
Sbjct: 474 QMWNGRH--KAIEP-VHIKNIVSEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPL 530
Query: 301 TSIIYECFQGELEVVKEIPKNTISGND 327
T + + +L+V E +N I ND
Sbjct: 531 TGTVESHGRHDLDVSNEAWRNHILRND 557
>gi|332817139|ref|XP_003309900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pan
troglodytes]
Length = 1372
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 564 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 610
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 611 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 667
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 668 KASQFTGYAQHDAQEFMAFLLDGLHEDL 695
>gi|239611164|gb|EEQ88151.1| RING and UBP finger domain-containing protein [Ajellomyces
dermatitidis ER-3]
Length = 779
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 113 RQVLDFDFEKF---CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRT 169
R FDF++ C V S +N++ CL+CG GR ++HA+ H E H ++L +
Sbjct: 489 RAAQTFDFDQGPTECQVCHSEVNLWLCLICGNIGCGRYDEAHAFAHFKETSHAFAMDLAS 548
Query: 170 EKVY-CLPDGY 179
++V+ + DGY
Sbjct: 549 QRVWDYVGDGY 559
>gi|291397578|ref|XP_002715234.1| PREDICTED: ubiquitin-specific protease 21 [Oryctolagus cuniculus]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|149040666|gb|EDL94623.1| rCG20407, isoform CRA_a [Rattus norvegicus]
Length = 460
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R + L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE--LTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|410263406|gb|JAA19669.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296342|gb|JAA26771.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1386
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 578 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 624
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 625 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 681
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 682 KASQFTGYAQHDAQEFMAFLLDGLHEDL 709
>gi|149040667|gb|EDL94624.1| rCG20407, isoform CRA_b [Rattus norvegicus]
Length = 446
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R + L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE--LTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|410351351|gb|JAA42279.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1386
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 578 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 624
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 625 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 681
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 682 KASQFTGYAQHDAQEFMAFLLDGLHEDL 709
>gi|410225088|gb|JAA09763.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410351345|gb|JAA42276.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1384
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 576 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 622
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 623 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 679
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 680 KASQFTGYAQHDAQEFMAFLLDGLHEDL 707
>gi|332215894|ref|XP_003257077.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Nomascus leucogenys]
Length = 1384
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 576 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 622
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 623 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 679
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 680 KASQFTGYAQHDAQEFMAFLLDGLHEDL 707
>gi|145551979|ref|XP_001461666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429501|emb|CAK94293.1| unnamed protein product [Paramecium tetraurelia]
Length = 484
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
+GL N+ T F+N +IQ+L PL ++F+ P+N + +V F L R
Sbjct: 49 LGLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHVKEINPDNPLSSQGNIVQSFAQLIRL 108
Query: 244 IW-----HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
+W + + P +F+ + + F G Q + EF+++LL+ +H DL K
Sbjct: 109 LWQKVDQYTLEEIQALKPTQFISTIGNYNPI-FAEGTQEDAHEFIAFLLDMIHEDLNRIK 167
Query: 299 K 299
K
Sbjct: 168 K 168
>gi|426340516|ref|XP_004034175.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Gorilla gorilla gorilla]
Length = 1372
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 564 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 610
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 611 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 667
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 668 KASQFTGYAQHDAQEFMAFLLDGLHEDL 695
>gi|189083712|ref|NP_001121110.1| ubiquitin carboxyl-terminal hydrolase 21 [Rattus norvegicus]
gi|226751948|sp|B2GUX4.1|UBP21_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|183986536|gb|AAI66443.1| Usp21 protein [Rattus norvegicus]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|148702709|gb|EDL34656.1| mCG13907, isoform CRA_c [Mus musculus]
Length = 1092
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + + A N
Sbjct: 159 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGGFCMLCLMQNHMVQAFANS 218
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 219 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 277
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 278 VHQIFGGYL 286
>gi|425774857|gb|EKV13152.1| hypothetical protein PDIG_39660 [Penicillium digitatum PHI26]
gi|425780947|gb|EKV18933.1| hypothetical protein PDIP_25200 [Penicillium digitatum Pd1]
Length = 730
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY 173
CS+ S N++ACL+CGK GR +HA+ H E H ++L +++V+
Sbjct: 460 CSICHSEENLWACLICGKVGCGRYDNAHAFAHWKETAHAFSMDLTSQRVW 509
>gi|348525234|ref|XP_003450127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Oreochromis
niloticus]
Length = 1149
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRVCHQSGFCMICVMQNHIIQAFANT 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|332817137|ref|XP_003309899.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pan
troglodytes]
gi|410263400|gb|JAA19666.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296336|gb|JAA26768.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1384
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 576 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 622
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 623 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 679
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 680 KASQFTGYAQHDAQEFMAFLLDGLHEDL 707
>gi|148702707|gb|EDL34654.1| mCG13907, isoform CRA_a [Mus musculus]
Length = 1008
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + + A N
Sbjct: 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGGFCMLCLMQNHMVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|410263404|gb|JAA19668.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296340|gb|JAA26770.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1382
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|332215896|ref|XP_003257078.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Nomascus leucogenys]
Length = 1372
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 564 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 610
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 611 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 667
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 668 KASQFTGYAQHDAQEFMAFLLDGLHEDL 695
>gi|149723495|ref|XP_001491180.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Equus
caballus]
Length = 1122
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCHQGGFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|323333728|gb|EGA75120.1| Sad1p [Saccharomyces cerevisiae AWRI796]
Length = 346
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 30/189 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
+G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 53 IGFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFK 110
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECF 308
+S +FL S + R G+ NP++ F+ WL N + ++ + SI+
Sbjct: 111 HHLSVDDFL------SYLKVREGLNLNPIDPRLFLLWLFNKI---CLSSNELKSILNHSC 161
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
+G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 162 KGKVKIAKVESKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDG 205
Query: 369 MEKNIIPQL 377
+ +PQ+
Sbjct: 206 NSVDDLPQI 214
>gi|148702708|gb|EDL34655.1| mCG13907, isoform CRA_b [Mus musculus]
Length = 1037
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + + A N
Sbjct: 104 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGGFCMLCLMQNHMVQAFANS 163
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 164 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 222
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 223 VHQIFGGYL 231
>gi|426340514|ref|XP_004034174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Gorilla gorilla gorilla]
Length = 1384
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 576 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 622
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 623 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 679
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 680 KASQFTGYAQHDAQEFMAFLLDGLHEDL 707
>gi|410225092|gb|JAA09765.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410351349|gb|JAA42278.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1382
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|451850604|gb|EMD63906.1| hypothetical protein COCSADRAFT_161272 [Cochliobolus sativus ND90Pr]
Length = 2144
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS--PLVHR------FGDLTR 242
HVGL N+ T ++N +Q L V L +FL + + P+ H+ + L
Sbjct: 1131 HVGLTNLGNTCYMNSALQCLRSVEELSMYFLSNKWKEEVNADNPIGHKGVIAKSYASLLS 1190
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
I+ N +SP +F Q + +A+ G Q + EF+SWL++ LH DL K
Sbjct: 1191 AIYSLDN-NSSISPKDFKQKLGRANSLFSGYG-QQDSQEFVSWLVDALHEDLNRIHK 1245
>gi|432101254|gb|ELK29492.1| Ubiquitin carboxyl-terminal hydrolase 21 [Myotis davidii]
Length = 663
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R + L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE--LTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|402860147|ref|XP_003894496.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Papio anubis]
Length = 1372
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 564 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 610
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 611 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 667
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 668 KASQFTGYAQHDAQEFMAFLLDGLHEDL 695
>gi|350583234|ref|XP_003481465.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Sus scrofa]
Length = 610
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 256 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 313
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 314 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 371
Query: 303 II 304
I+
Sbjct: 372 IL 373
>gi|403291358|ref|XP_003936762.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Saimiri
boliviensis boliviensis]
Length = 1482
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 674 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 720
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 721 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 777
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 778 KASQFTGYAQHDAQEFMAFLLDGLHEDL 805
>gi|411147407|ref|NP_001258643.1| ubiquitin specific peptidase 19 [Sus scrofa]
Length = 1341
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 533 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 579
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 580 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS---KLKAIVAS 636
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 637 KASQFTGYAQHDAQEFMAFLLDGLHEDL 664
>gi|402860145|ref|XP_003894495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Papio anubis]
Length = 1384
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 576 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 622
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 623 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 679
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 680 KASQFTGYAQHDAQEFMAFLLDGLHEDL 707
>gi|431916120|gb|ELK16374.1| Ubiquitin carboxyl-terminal hydrolase 21 [Pteropus alecto]
Length = 593
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+WH + + V+P F +AV + F Q + EF+ L+ LH ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEV 317
>gi|390594557|gb|EIN03967.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 560
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLI-PENYRHC--KSPLVHRFGDLTRKIWHARN 249
GL N+ +T F+NV +QSL+ LRN+FL N R C K L R+++
Sbjct: 183 GLLNLGQTCFLNVVLQSLIHNPLLRNYFLGDKHNVRLCKLKECTCCEMDALFREVYSGE- 241
Query: 250 FKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT--SIIYEC 307
+ P FL + KAS + Q F+S +LN +H R + + II+
Sbjct: 242 -QAPYGPTSFLATLWKASSELSGYAQQDAHECFIS-ILNQIHGTSRGSTNVSCNCIIHST 299
Query: 308 FQGELE 313
FQG+L+
Sbjct: 300 FQGQLQ 305
>gi|194390786|dbj|BAG62152.1| unnamed protein product [Homo sapiens]
Length = 1372
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 564 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 610
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 611 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 667
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 668 KASQFTGYAQHDAQEFMAFLLDGLHEDL 695
>gi|440892473|gb|ELR45652.1| Ubiquitin carboxyl-terminal hydrolase 36 [Bos grunniens mutus]
Length = 1098
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 120 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSFCMLCVMQNHIIQAFANS 179
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 180 GNAIKPVSFIRDLRKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQATTL 238
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 239 VHQIFGGYL 247
>gi|426239211|ref|XP_004013519.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Ovis aries]
Length = 1080
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSFCMLCVMQNHIIQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLRKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|7018438|emb|CAB75649.1| hypothetical protein [Homo sapiens]
Length = 268
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 21 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 78
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 79 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 136
Query: 303 II 304
I+
Sbjct: 137 IL 138
>gi|354473286|ref|XP_003498867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus
griseus]
gi|344241778|gb|EGV97881.1| Ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus griseus]
Length = 1104
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + + A N
Sbjct: 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHMVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|312596875|ref|NP_001186091.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 3 [Homo sapiens]
Length = 1372
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 564 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 610
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 611 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 667
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 668 KASQFTGYAQHDAQEFMAFLLDGLHEDL 695
>gi|452000642|gb|EMD93103.1| hypothetical protein COCHEDRAFT_1223774 [Cochliobolus heterostrophus
C5]
Length = 2168
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKS--PLVHR------FGDLTR 242
HVGL N+ T ++N +Q L V L +FL + + P+ H+ + L
Sbjct: 1155 HVGLTNLGNTCYMNSALQCLRSVEELSMYFLSNKWKEEVNADNPIGHKGVIAKSYASLLS 1214
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
I+ N +SP +F Q + +A+ G Q + EF+SWL++ LH DL K
Sbjct: 1215 AIYSLDN-NSSISPKDFKQKLGRANSLFSGYG-QQDSQEFVSWLVDALHEDLNRIHK 1269
>gi|402856872|ref|XP_003893003.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 21 [Papio anubis]
Length = 670
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 241 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 298
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 299 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 356
Query: 303 II 304
I+
Sbjct: 357 IL 358
>gi|395856539|ref|XP_003800685.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Otolemur
garnettii]
Length = 1504
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 696 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 742
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 743 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS---KLKAIVAS 799
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 800 KASQFTGYAQHDAQEFMAFLLDGLHEDL 827
>gi|392887711|ref|NP_493434.3| Protein USP-3 [Caenorhabditis elegans]
gi|379657283|emb|CAC14423.3| Protein USP-3 [Caenorhabditis elegans]
Length = 550
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 190 RHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP---ENYRH-CKSPL----VHRFGDLT 241
R G+ N+ T F+N +Q+L ++ R + + E+Y H K P D
Sbjct: 227 RPRGMRNVGNTCFMNAVLQALASISEFREYIMSLSSLEDYIHDEKEPKNGGNYCYLTDEY 286
Query: 242 RKIW---HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
RK+ AR+F+ +P+EF +A + RFR Q + EFM + +++LH+++R +
Sbjct: 287 RKLLISQSARSFREPTAPNEFREAFISVCP-RFRGFRQHDSHEFMRYFMDSLHTEMRKCR 345
Query: 299 K 299
K
Sbjct: 346 K 346
>gi|297487366|ref|XP_002696201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
gi|296476002|tpg|DAA18117.1| TPA: deubiquitinating enzyme 1-like [Bos taurus]
Length = 1101
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSFCMLCVMQNHIIQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLRKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|53759138|ref|NP_997702.1| ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Gallus gallus]
Length = 953
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 173 YCLPD-----GYEINDPSLEDIRH------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
YCLP Y+ ++P RH GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPG----RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL 289
Query: 222 IP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+N + + + +L +++W + V+P F V + + + F
Sbjct: 290 NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSG 346
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTE 331
Q + E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 347 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV 406
Query: 332 KGSDGGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNI 373
G + E +++ PF L L LP PL K + K +
Sbjct: 407 DIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVFLVRMDPLAKPMQYKVV 466
Query: 374 IPQL 377
+P++
Sbjct: 467 VPKI 470
>gi|346971145|gb|EGY14597.1| ubiquitin carboxyl-terminal hydrolase [Verticillium dahliae
VdLs.17]
Length = 1451
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 189 IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK--SPLVH------RFGDL 240
+ VGL N+ T ++N +Q + V L +FL E + +PL + +G L
Sbjct: 408 VGAVGLQNLGNTCYMNSALQCVRSVEELTKYFLTSEYEKELNRDNPLGYDGQVAITYGQL 467
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
++I+ R+ +G VSP EF + + + F Q + EF+ +LL+ L DL KK
Sbjct: 468 LKEIY--RDSRGAVSPREF-KVTIGRCRSAFSGWGQQDTQEFLGFLLDGLQEDLSRIKKK 524
Query: 301 TSI 303
I
Sbjct: 525 PYI 527
>gi|297285805|ref|XP_002802845.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like, partial
[Macaca mulatta]
Length = 1394
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 663 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 709
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 710 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 766
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 767 KASQFTGYAQHDAQEFMAFLLDGLHEDL 794
>gi|226442882|ref|NP_001028700.1| ubiquitin carboxyl-terminal hydrolase 36 [Mus musculus]
gi|251765139|sp|B1AQJ2.1|UBP36_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1098
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + + A N
Sbjct: 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGGFCMLCLMQNHMVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|390331847|ref|XP_003723365.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Strongylocentrotus purpuratus]
Length = 1640
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTR 242
+ GL+N+ T F+N +Q L L++F L + N LV F L R
Sbjct: 765 YCGLDNLGNTCFMNSVLQVLANTRELKDFMLGADFKNEINRDNPLGSGGHLVLSFAVLMR 824
Query: 243 KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
++W ++ ++P + L++++ A +F Q + EFM++LL+ LH D+ +K
Sbjct: 825 RLWGGQH--KSIAPSK-LKSIISAKASQFMGFAQHDAQEFMAFLLDGLHEDINRIRK 878
>gi|312596873|ref|NP_001186090.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Homo sapiens]
Length = 1384
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 576 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 622
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 623 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 679
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 680 KASQFTGYAQHDAQEFMAFLLDGLHEDL 707
>gi|37360390|dbj|BAC98173.1| mKIAA1453 protein [Mus musculus]
Length = 974
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + + A N
Sbjct: 159 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGGFCMLCLMQNHMVQAFANS 218
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 219 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTL 277
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 278 VHQIFGGYL 286
>gi|291415162|ref|XP_002723823.1| PREDICTED: ubiquitin specific peptidase 36 [Oryctolagus cuniculus]
Length = 1054
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R+C + I A N
Sbjct: 122 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSQEHARNCHQGGFCMLCVMQNHIIQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 182 GNAIKPVSFIRDLRKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTL 240
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 241 VHQIFGGYL 249
>gi|355746704|gb|EHH51318.1| hypothetical protein EGM_10672 [Macaca fascicularis]
Length = 1419
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|53759136|ref|NP_990171.2| ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Gallus gallus]
Length = 981
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 173 YCLPD-----GYEINDPSLEDIRH------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
YCLP Y+ ++P RH GL+N+ T F+N IQ L PL +FL
Sbjct: 262 YCLPSYTAYKNYDYSEPG----RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL 317
Query: 222 IP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+N + + + +L +++W + V+P F V + + + F
Sbjct: 318 NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSG 374
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTE 331
Q + E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 375 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV 434
Query: 332 KGSDGGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNI 373
G + E +++ PF L L LP PL K + K +
Sbjct: 435 DIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVFLVRMDPLAKPMQYKVV 494
Query: 374 IPQL 377
+P++
Sbjct: 495 VPKI 498
>gi|390475153|ref|XP_003734910.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 19 [Callithrix jacchus]
Length = 1489
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 681 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 727
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 728 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS---KLKAIVAS 784
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 785 KASQFTGYAQHDAQEFMAFLLDGLHEDL 812
>gi|145533913|ref|XP_001452701.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420400|emb|CAK85304.1| unnamed protein product [Paramecium tetraurelia]
Length = 1035
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 17/133 (12%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--CKSP------LVHRFGDLTRKI 244
GL N+ T F+N +Q L L + + E Y+H C +P L + +L + +
Sbjct: 433 GLQNLGNTCFMNAALQCLSNTYELTEYMVSNEFYQHLNCDNPLGTKGVLATAYAELMKIM 492
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W+ N VS ++ + + K + + + G Q + EF+S+LL+ LH DL ++
Sbjct: 493 WYGNN--SAVSAYDLKRVIGKFAPQFYGYG-QQDSHEFLSYLLDGLHEDL------NRVL 543
Query: 305 YECFQGELEVVKE 317
+ F E+E+ E
Sbjct: 544 NKPFVSEVEITDE 556
>gi|348581896|ref|XP_003476713.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Cavia porcellus]
Length = 1296
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 491 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 537
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 538 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 594
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 595 KASQFTGYAQHDAQEFMAFLLDGLHEDL 622
>gi|119573027|gb|EAW52642.1| ubiquitin specific peptidase 21, isoform CRA_a [Homo sapiens]
Length = 258
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 11 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 68
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 69 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 126
Query: 303 II 304
I+
Sbjct: 127 IL 128
>gi|348581892|ref|XP_003476711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Cavia porcellus]
Length = 1321
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 516 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 562
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 563 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 619
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 620 KASQFTGYAQHDAQEFMAFLLDGLHEDL 647
>gi|224093937|ref|XP_002186908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Taeniopygia guttata]
Length = 953
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 173 YCLPD-----GYEINDPSLEDIRH------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
YCLP Y+ ++P RH GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPG----RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL 289
Query: 222 IP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+N + + + +L +++W + V+P F V + + + F
Sbjct: 290 NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSG 346
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTE 331
Q + E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 347 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV 406
Query: 332 KGSDGGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNI 373
G + E +++ PF L L LP PL K + K +
Sbjct: 407 DIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLAKPMQYKVV 466
Query: 374 IPQL 377
+P++
Sbjct: 467 VPKI 470
>gi|444522041|gb|ELV13282.1| Ubiquitin carboxyl-terminal hydrolase 21 [Tupaia chinensis]
Length = 673
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 328 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 385
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 386 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 443
Query: 303 II 304
I+
Sbjct: 444 IL 445
>gi|311266703|ref|XP_003131212.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sus scrofa]
Length = 1140
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + I A N
Sbjct: 118 AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHTRGCHQGSFCMLCVMQNHIVQAFANS 177
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH-------SDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + + L + T++
Sbjct: 178 GNAIKPVSFIRDLRKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQATTL 236
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 237 VHQIFGGYL 245
>gi|148744351|gb|AAI42661.1| USP19 protein [Homo sapiens]
Length = 1447
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 639 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 685
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 686 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS---KLKAIVAS 742
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 743 KASQFTGYAQHDAQEFMAFLLDGLHEDL 770
>gi|440291460|gb|ELP84729.1| hypothetical protein EIN_174040 [Entamoeba invadens IP1]
Length = 910
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 177 DGYEINDPSLEDIRHV-GLNNIKETDFVNVTIQSLMRVTPLRNFFL--IPENYRHCKSPL 233
DGY+ ND + V GL N+ T F+N +IQ ++ V PL +F + +N + +PL
Sbjct: 276 DGYD-NDEMKRGTKGVCGLQNLGNTCFMNSSIQCIVHVMPLVKYFERGMWKNEVNTTNPL 334
Query: 234 ------VHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
+ DL K W ++ +SP F A+ + + +F Q + E MS+L+
Sbjct: 335 GTQGKLASAWADLVNKYWGGHSY---ISPKSFKTAIGEFAP-QFSGYQQHDSQELMSFLI 390
Query: 288 NTLHSDLRNTKKNTSIIYECFQGELE 313
+ +H DL K + + GE E
Sbjct: 391 DGIHEDLNRVVKKVYVQSPDYNGETE 416
>gi|410225090|gb|JAA09764.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410351347|gb|JAA42277.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1421
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 576 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 622
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 623 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 679
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 680 KASQFTGYAQHDAQEFMAFLLDGLHEDL 707
>gi|397495156|ref|XP_003818426.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1 [Pan
paniscus]
Length = 1419
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|302769562|ref|XP_002968200.1| hypothetical protein SELMODRAFT_89370 [Selaginella moellendorffii]
gi|302788816|ref|XP_002976177.1| hypothetical protein SELMODRAFT_104064 [Selaginella moellendorffii]
gi|300156453|gb|EFJ23082.1| hypothetical protein SELMODRAFT_104064 [Selaginella moellendorffii]
gi|300163844|gb|EFJ30454.1| hypothetical protein SELMODRAFT_89370 [Selaginella moellendorffii]
Length = 117
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 93 GQRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHA 152
G+ S VE R CP+LD V L F+ C++ + + CL C K GR H
Sbjct: 1 GEDSGWVEARTSCPHLDRVCNAPLLPRFDAPCAICGDHRENWVCLSCRKVLCGRFINGHM 60
Query: 153 YTHSLEAGHHVYINLRTEKVYCLP-DGY 179
+H E GH ++ R V+C D Y
Sbjct: 61 LSHFQEFGHPSALSYRDLSVWCFACDSY 88
>gi|410263402|gb|JAA19667.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296338|gb|JAA26769.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1421
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 576 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 622
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 623 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 679
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 680 KASQFTGYAQHDAQEFMAFLLDGLHEDL 707
>gi|395733810|ref|XP_002813806.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pongo abelii]
Length = 1411
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 566 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 612
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 613 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 669
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 670 KASQFTGYAQHDAQEFMAFLLDGLHEDL 697
>gi|167534029|ref|XP_001748693.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772934|gb|EDQ86580.1| predicted protein [Monosiga brevicollis MX1]
Length = 1086
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 39/169 (23%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L LR FFL N C L + +L K
Sbjct: 420 TGLRNLGNTCFMNSALQCLSHCADLRQFFLSGRWQQDLNKNNPIGCDGHLAEAYAELLEK 479
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL--------- 294
+W A + VSP + K + + F Q + E ++LL+ LH DL
Sbjct: 480 LWSAT--QADVSPWHLKDTISKFAPQ-FSGYQQHDSQELTAFLLDGLHEDLNRIQKKPFV 536
Query: 295 ------------------RNTKKNTSIIYECFQGELEVVKEIPK-NTIS 324
R+ +N SII + FQG+++ P+ N IS
Sbjct: 537 EAKEAEGEDVTAAREAWTRHLLRNDSIIVDLFQGQIKSTLNCPECNKIS 585
>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
Length = 1016
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL+N+ T F+N T+Q L PL N+ L E+ + C P + I
Sbjct: 83 AGLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANS 142
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD------LRNTKKNTSIIY 305
G V + +K K FR G Q + EF+ + ++ + L + T+ ++
Sbjct: 143 GNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTFVH 202
Query: 306 ECFQGEL 312
+ F G L
Sbjct: 203 QIFGGYL 209
>gi|224093933|ref|XP_002186882.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Taeniopygia guttata]
Length = 981
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 173 YCLPD-----GYEINDPSLEDIRH------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
YCLP Y+ ++P RH GL+N+ T F+N IQ L PL +FL
Sbjct: 262 YCLPSYTAYKNYDYSEPG----RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL 317
Query: 222 IP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+N + + + +L +++W + V+P F V + + + F
Sbjct: 318 NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSG 374
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTE 331
Q + E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 375 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV 434
Query: 332 KGSDGGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNI 373
G + E +++ PF L L LP PL K + K +
Sbjct: 435 DIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLAKPMQYKVV 494
Query: 374 IPQL 377
+P++
Sbjct: 495 VPKI 498
>gi|114052120|ref|NP_001039841.1| ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|122136171|sp|Q2KJ72.1|UBP21_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|86821766|gb|AAI05489.1| Ubiquitin specific peptidase 21 [Bos taurus]
Length = 565
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R L F D+
Sbjct: 211 HVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGR--AQELTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
SS1]
Length = 1408
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRKI 244
GL N+ T ++N T+Q L P FF + N K + F + +I
Sbjct: 1049 GLRNLGNTCYMNATMQCLSATVPFARFFTEGRWRAAVNMMNKMGTKGAIAQAFAHILHEI 1108
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTSI 303
W SP F +++ + + F Q + EF+SWLL+ LH DL R K+T
Sbjct: 1109 WQGE--MSFFSPISFRRSICSYASQ-FAGSEQHDSQEFLSWLLDALHEDLNRVISKSTYE 1165
Query: 304 IYECFQGELEVVKE 317
+ + ELE + +
Sbjct: 1166 VTPEREAELEKLPQ 1179
>gi|148745123|gb|AAI42728.1| USP19 protein [Homo sapiens]
Length = 1449
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 641 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 687
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 688 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS---KLKAIVAS 744
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 745 KASQFTGYAQHDAQEFMAFLLDGLHEDL 772
>gi|302410611|ref|XP_003003139.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
gi|261358163|gb|EEY20591.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
Length = 1870
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 189 IRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK--SPLVH------RFGDL 240
+ VGL N+ T ++N +Q + V L +FL E + +PL + +G L
Sbjct: 826 VGAVGLQNLGNTCYMNSALQCVRSVEELTKYFLTSEYEKELNRDNPLGYDGQVAITYGQL 885
Query: 241 TRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
++I+ R+ +G VSP EF + + + F Q + EF+ +LL+ L DL KK
Sbjct: 886 LKEIY--RDSRGAVSPREF-KVTIGRCRSAFSGWGQQDTQEFLGFLLDGLQEDLSRIKKK 942
Query: 301 TSI 303
I
Sbjct: 943 PYI 945
>gi|392565514|gb|EIW58691.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1086
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 19/186 (10%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP--------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N IQ L T L ++FL +N + FG L +I
Sbjct: 365 GLGNMGNTCFMNSAIQCLAHNTELVDYFLTGAYQEELNYDNPLGMHGAVAQAFGALMSRI 424
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + +P EF Q + + + + F Q + E +++LL+ LH DL K +
Sbjct: 425 WDPESTMSSYTPREFKQTLQRFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVE 483
Query: 305 YECFQGE-----LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLM 354
++G +E+ + + ND G + E S++ PF+
Sbjct: 484 KPDWEGGGDKELVELANTSWEGYMKQNDSVVVDLFQGQYQSTLVCPECSKVSITFDPFMY 543
Query: 355 LGLDLP 360
L L LP
Sbjct: 544 LTLPLP 549
>gi|310798441|gb|EFQ33334.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
M1.001]
Length = 1490
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRHCKSPLVHRFGDLTRK 243
VGL N+ T ++N +Q + V L +FL + N K + +G L ++
Sbjct: 444 VGLQNLGNTCYMNSALQCVRSVEELTKYFLTDQYKEELNKANPLGYKGQVAMAYGGLLKE 503
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
I+ +G VSP +F V +A + F+ Q + EF+ +LL+ L DL KK I
Sbjct: 504 IYAES--RGAVSPRDFKNTVGRA-RSTFQGWGQQDTQEFLGFLLDALQEDLSRIKKKPYI 560
>gi|74220030|dbj|BAE40593.1| unnamed protein product [Mus musculus]
Length = 952
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 293
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 294 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 350
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 351 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 410
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 411 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 470
>gi|326927732|ref|XP_003210044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Meleagris
gallopavo]
Length = 917
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 177 DGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPE--------NYRH 228
D ++ P L GL+N+ T F+N +Q L PL ++FL + N
Sbjct: 270 DSASLSQPGL-----CGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLG 324
Query: 229 CKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLN 288
+ + + +L ++IW R + V+P F V + + + F Q + E +++LL+
Sbjct: 325 MRGEIAEAYAELIKQIWSGR--QSHVAPRMFKTQVGRFAPQ-FSGYQQQDSQELLAFLLD 381
Query: 289 TLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSDGGDDHDNITTE 346
LH DL KK + + G + V KE +N ND G + +
Sbjct: 382 GLHEDLNRVKKKPYLELKDANGRPDSVVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPK 441
Query: 347 TSRM-----PFLMLGLDLPPPPLFKD-VMEKNIIP 375
S++ PF L L P PL +D ++E ++P
Sbjct: 442 CSKVSVTFDPFCYLTL---PLPLKRDRLLEVTLVP 473
>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
Length = 985
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL+N+ T F+N T+Q L PL N+ L E+ + C P + I
Sbjct: 83 AGLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANS 142
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSD------LRNTKKNTSIIY 305
G V + +K K FR G Q + EF+ + ++ + L + T+ ++
Sbjct: 143 GNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTFVH 202
Query: 306 ECFQGEL 312
+ F G L
Sbjct: 203 QIFGGYL 209
>gi|432100061|gb|ELK28954.1| Ubiquitin carboxyl-terminal hydrolase 42 [Myotis davidii]
Length = 1175
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F N +Q L PL N+ L E+ + C + + I A +
Sbjct: 111 AGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNP 170
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-------KNTSII 304
G V F+ M+ + FR G Q + EF+ + ++ + N + T+++
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLV 230
Query: 305 YECFQGEL 312
+ F G L
Sbjct: 231 CQIFGGYL 238
>gi|426340518|ref|XP_004034176.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Gorilla gorilla gorilla]
Length = 1419
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|327272916|ref|XP_003221230.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 2
[Anolis carolinensis]
Length = 953
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 173 YCLPD-----GYEINDPSLEDIRH------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
YCLP Y+ ++P RH GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPG----RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL 289
Query: 222 IP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+N + + + +L +++W + V+P F V + + + F
Sbjct: 290 NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSG 346
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTE 331
Q + E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 347 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV 406
Query: 332 KGSDGGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNI 373
G + E +++ PF L L LP PL K + K +
Sbjct: 407 DIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVV 466
Query: 374 IPQL 377
+P++
Sbjct: 467 VPKI 470
>gi|412989987|emb|CCO20629.1| predicted protein [Bathycoccus prasinos]
Length = 706
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 33/152 (21%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--CKSPLVHRF--GDLTRK-IWHA 247
GL N+ T F+N +Q L L NFFL E+ +H S F G+L + + H+
Sbjct: 85 GLQNLGNTCFLNAVLQCLTYTPALANFFLNNEHQKHKNLSSGFNSLFEMGNLVKNTLIHS 144
Query: 248 RNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLH--------------SD 293
+N V P F++ + +A K F+ G Q + EF LL+++H S+
Sbjct: 145 KNKHHAVPPTAFVKNI-RALSKTFKKGRQEDSHEFARCLLDSMHKRCCMLGRVDDGSSSN 203
Query: 294 LRNTKK-------------NTSIIYECFQGEL 312
RN KK T+ I+ F G+L
Sbjct: 204 TRNGKKLTANAIDPESKEAETTFIWRVFGGQL 235
>gi|332215898|ref|XP_003257079.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Nomascus leucogenys]
Length = 1419
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|327264744|ref|XP_003217171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Anolis
carolinensis]
Length = 1114
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N T+Q L PL N+ L E+ R C + + A N
Sbjct: 120 AGLHNLGNTCFLNSTLQCLTYTPPLANYLLSKEHSRSCHQGGFCMMCIMQNHMIQAFANS 179
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTL-------HSDLRNTKKNTSI 303
+ P F++ + K + + FR G Q + EF+ + ++ + ++ L + T++
Sbjct: 180 GNAIKPVSFIRDLKKIA-RHFRFGSQEDAHEFLRYTIDAMQKACLNGYTKLDRQTQATTL 238
Query: 304 IYECFQGEL 312
+++ F G L
Sbjct: 239 VHQIFGGYL 247
>gi|149066659|gb|EDM16532.1| ubiquitin specific peptidase 15, isoform CRA_a [Rattus norvegicus]
Length = 981
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 263 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 322
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 323 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 379
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 380 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 439
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 440 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 499
>gi|351711877|gb|EHB14796.1| Ubiquitin carboxyl-terminal hydrolase 19 [Heterocephalus glaber]
Length = 1394
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 521 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 567
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 568 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 624
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 625 KASQFTGYAQHDAQEFMAFLLDGLHEDL 652
>gi|344252454|gb|EGW08558.1| Ubiquitin carboxyl-terminal hydrolase 21 [Cricetulus griseus]
Length = 484
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R + L F D+
Sbjct: 211 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE--LTEAFADVIGA 268
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 269 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 303 II 304
I+
Sbjct: 327 IL 328
>gi|149066661|gb|EDM16534.1| ubiquitin specific peptidase 15, isoform CRA_c [Rattus norvegicus]
Length = 654
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 13 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 72
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 73 QEELNFDNPLGMRGEIAKSYAELIKQMWSGK--FSYVTPRAFKTQVGRFAPQ-FSGYQQQ 129
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 130 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 189
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 190 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 249
>gi|21592289|ref|NP_660185.1| ubiquitin carboxyl-terminal hydrolase 15 [Rattus norvegicus]
gi|81872777|sp|Q9R085.1|UBP15_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase of 109 kDa; AltName:
Full=Ubiquitin thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|6492122|gb|AAF14188.1|AF106657_1 deubiquitinating enzyme Ubp109 [Rattus norvegicus]
Length = 952
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 293
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 294 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 350
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 351 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 410
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 411 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 470
>gi|74228797|dbj|BAE21887.1| unnamed protein product [Mus musculus]
Length = 952
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 293
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 294 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 350
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 351 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 410
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 411 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 470
>gi|327272914|ref|XP_003221229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 1
[Anolis carolinensis]
Length = 981
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 173 YCLPD-----GYEINDPSLEDIRH------VGLNNIKETDFVNVTIQSLMRVTPLRNFFL 221
YCLP Y+ ++P RH GL+N+ T F+N IQ L PL +FL
Sbjct: 262 YCLPSYTAYKNYDYSEPG----RHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFL 317
Query: 222 IP--------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRI 273
+N + + + +L +++W + V+P F V + + + F
Sbjct: 318 NDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSG 374
Query: 274 GVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTE 331
Q + E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 375 YQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV 434
Query: 332 KGSDGGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNI 373
G + E +++ PF L L LP PL K + K +
Sbjct: 435 DIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVV 494
Query: 374 IPQL 377
+P++
Sbjct: 495 VPKI 498
>gi|74149555|dbj|BAE36413.1| unnamed protein product [Mus musculus]
Length = 981
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 263 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 322
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 323 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 379
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 380 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 439
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 440 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 499
>gi|402860149|ref|XP_003894497.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Papio anubis]
Length = 1419
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|312596871|ref|NP_001186089.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 1 [Homo sapiens]
Length = 1419
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|291393657|ref|XP_002713460.1| PREDICTED: ubiquitin thioesterase 19 isoform 1 [Oryctolagus
cuniculus]
Length = 1322
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 514 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 560
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 561 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS---KLKAIVAS 617
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 618 KASQFTGYAQHDAQEFMAFLLDGLHEDL 645
>gi|344275832|ref|XP_003409715.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Loxodonta
africana]
Length = 1321
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 513 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 559
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 560 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 616
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 617 KASQFTGYAQHDAQEFMAFLLDGLHEDL 644
>gi|355559647|gb|EHH16375.1| hypothetical protein EGK_11647 [Macaca mulatta]
Length = 1419
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|194378288|dbj|BAG57894.1| unnamed protein product [Homo sapiens]
Length = 1419
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|29747941|gb|AAH50042.1| Ubiquitin specific peptidase 15 [Mus musculus]
Length = 981
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 263 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 322
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 323 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 379
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 380 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 439
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 440 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 499
>gi|332817141|ref|XP_003309901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pan
troglodytes]
Length = 1419
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 574 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 620
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 621 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 677
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 678 KASQFTGYAQHDAQEFMAFLLDGLHEDL 705
>gi|323305107|gb|EGA58857.1| Sad1p [Saccharomyces cerevisiae FostersB]
Length = 362
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
+G N D+ + + + + P+R+ FL+ N+ + + R +KIW + FK
Sbjct: 53 IGFTNAATYDYAHSVLLLISHMVPVRDHFLL--NHFDNQGEFIKRLSICVKKIWSPKLFK 110
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVE---FMSWLLNTLHSDLRNTKKNTSIIYECF 308
+S +F S + R G+ NP++ F+ WL N + K SI+
Sbjct: 111 HHLSVDDF------XSYLKVREGLNLNPIDPRLFLLWLFNKICXSSNXLK---SILNHSC 161
Query: 309 QGELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDV 368
+G++++ K K S +++T + PF +L LDLP F+D
Sbjct: 162 KGKVKIAKVEXKPEAS----------------ESVTGKVIVKPFWVLTLDLPEFSPFEDG 205
Query: 369 MEKNIIPQL 377
+ +PQ+
Sbjct: 206 NSVDDLPQI 214
>gi|148692493|gb|EDL24440.1| ubiquitin specific peptidase 15, isoform CRA_b [Mus musculus]
Length = 663
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 12 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 71
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 72 QEELNFDNPLGMRGEIAKSYAELIKQMWSGK--FSYVTPRAFKTQVGRFAPQ-FSGYQQQ 128
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 129 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 188
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 189 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 248
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +Q L PL + L I + L F L + I
Sbjct: 1 LGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSI 60
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
W + N + +SP F + K + RF Q + EF+ +LL LH D+
Sbjct: 61 WRSSNGEYAISPQAFRSQIQKFA-PRFMGYSQQDSQEFLHYLLQGLHEDI 109
>gi|47219848|emb|CAF97118.1| unnamed protein product [Tetraodon nigroviridis]
Length = 977
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 98/264 (37%), Gaps = 59/264 (22%)
Query: 105 CPYLDTV---NRQVLDFDFEKFC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP++D++ ++ L + C S + N++ACL Y G G+ H+ H+
Sbjct: 7 CPHVDSIGETTKEDLLLKAKGTCQSCTAGGPNLWACLQTDCSYVGCGESYSDHSTLHAQA 66
Query: 159 AGHHVYINLRTEKVYCLPDGYEI--------------------------NDPSLEDIRHV 192
H++ +NL T +++C E+ + P+ ++ V
Sbjct: 67 KKHNLTVNLTTFRIWCYVCEREVFLDHRATLVPIPAVSHHCKAAEQDAASQPAGHPLKGV 126
Query: 193 -----------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RH 228
G+ NI + ++N +Q+L PL FFL R
Sbjct: 127 PIAVAEEDGSESEEDELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFLDCSGLVRT 186
Query: 229 CKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
K P L + L ++WH + V P + K FR Q + EF+ L+
Sbjct: 187 DKKPALCKSYQKLISELWHKKR-PSYVVPTSLSNGI-KLVNPMFRGYAQQDTQEFLRCLM 244
Query: 288 NTLHSDLRNTKKNTSIIYECFQGE 311
+ LH +L+ S E GE
Sbjct: 245 DQLHEELKEPLAECSTSGEGSDGE 268
>gi|21489969|ref|NP_081880.2| ubiquitin carboxyl-terminal hydrolase 15 [Mus musculus]
gi|28558361|sp|Q8R5H1.1|UBP15_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|18653399|gb|AAL77418.1|AF468037_1 deubiquitinating enzyme Usp15 [Mus musculus]
gi|74217049|dbj|BAE26626.1| unnamed protein product [Mus musculus]
gi|148692492|gb|EDL24439.1| ubiquitin specific peptidase 15, isoform CRA_a [Mus musculus]
Length = 981
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 263 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 322
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 323 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 379
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 380 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 439
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 440 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 499
>gi|296474940|tpg|DAA17055.1| TPA: ubiquitin specific peptidase 19 [Bos taurus]
Length = 1238
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 430 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 476
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 477 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 533
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 534 KASQFTGYAQHDAQEFMAFLLDGLHEDL 561
>gi|149066660|gb|EDM16533.1| ubiquitin specific peptidase 15, isoform CRA_b [Rattus norvegicus]
Length = 952
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 293
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 294 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 350
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 351 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 410
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 411 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 470
>gi|119585361|gb|EAW64957.1| ubiquitin specific peptidase 19, isoform CRA_b [Homo sapiens]
Length = 1283
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 475 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 521
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 522 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 578
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 579 KASQFTGYAQHDAQEFMAFLLDGLHEDL 606
>gi|341884216|gb|EGT40151.1| hypothetical protein CAEBREN_23214 [Caenorhabditis brenneri]
Length = 1054
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 74/193 (38%), Gaps = 28/193 (14%)
Query: 8 NGSADEDRHVKSVKVVEQSSPSPPRLGFEN-----PLLPLANTYDD-DDEEEEYGGRGDS 61
NGS DE S++ +E P P E+ P+ P T ++ DE E + S
Sbjct: 871 NGSIDE-----SIEPIESPEPIEPFEANESDESIEPIEPFDPTEENGSDESIEMSDQSSS 925
Query: 62 GAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLD-FDF 120
G+ +D + L++G V DCP+L+ + L D
Sbjct: 926 GSA-----------HPPSQQDFEALSSGPAYA-----VVPLADCPHLNDIQPLPLAGIDA 969
Query: 121 EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE 180
CS V+ CL C KY GR HA H L H + +++ V+C P
Sbjct: 970 STTCSDCNIGAEVWTCLTCYKYNCGRFVHEHALMHHLSTSHPMALSMADLSVWCYPCEAY 1029
Query: 181 INDPSLEDIRHVG 193
++ P L + G
Sbjct: 1030 VHHPILIPAKSAG 1042
>gi|24659445|gb|AAH38983.1| USP36 protein [Homo sapiens]
Length = 285
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHA-RNF 250
GL+N+ T F+N TIQ L PL N+ L E+ R C + I A N
Sbjct: 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANS 181
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQG 310
+ P F++ + K + + FR G Q + EF+ + ++ + N + + QG
Sbjct: 182 GNAIKPVSFIRDLKKIA-RHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKCVLPHPPSQG 240
Query: 311 ELEVVKEIPKNTISGNDQ 328
+ + GN Q
Sbjct: 241 FGHLFYMVAAEHSYGNSQ 258
>gi|358418211|ref|XP_592460.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Bos taurus]
Length = 1467
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 659 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 705
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 706 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS---KLKAIVAS 762
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 763 KASQFTGYAQHDAQEFMAFLLDGLHEDL 790
>gi|338714694|ref|XP_001498305.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 19 isoform 1 [Equus caballus]
Length = 1404
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 596 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 642
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 643 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 699
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 700 KASQFTGYAQHDAQEFMAFLLDGLHEDL 727
>gi|417413803|gb|JAA53213.1| Putative ubiquitin carboxyl-terminal hydrolase 19, partial
[Desmodus rotundus]
Length = 1377
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 569 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 615
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 616 ELRDFFHDRSFETEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 672
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 673 KASQFTGYAQHDAQEFMAFLLDGLHEDL 700
>gi|348581894|ref|XP_003476712.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Cavia porcellus]
Length = 1357
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 515 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 561
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 562 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 618
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 619 KASQFTGYAQHDAQEFMAFLLDGLHEDL 646
>gi|291393659|ref|XP_002713461.1| PREDICTED: ubiquitin thioesterase 19 isoform 2 [Oryctolagus
cuniculus]
Length = 1360
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 515 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 561
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 562 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 618
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 619 KASQFTGYAQHDAQEFMAFLLDGLHEDL 646
>gi|426249944|ref|XP_004018706.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Ovis aries]
Length = 1269
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 463 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 509
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 510 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS---KLKAIVAS 566
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 567 KASQFTGYAQHDAQEFMAFLLDGLHEDL 594
>gi|348502126|ref|XP_003438620.1| PREDICTED: hypothetical protein LOC100709216 [Oreochromis
niloticus]
Length = 1174
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 84/214 (39%), Gaps = 30/214 (14%)
Query: 170 EKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC 229
+KV PD + + I GL N+ T F+N +Q L PL N+ L E+ + C
Sbjct: 63 QKVLFSPDRLSLKWAQVHRIG-AGLQNMGNTCFLNSALQCLTYTPPLANYMLTREHSKTC 121
Query: 230 KSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNT 289
P + + G V + +K K FR G Q + EF+ + ++
Sbjct: 122 HEPGFCMMCTMQNHVIQVFANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDA 181
Query: 290 LH-SDLRNTK-----KNTSIIYECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDN 342
+ S L TK + TS I++ F G L VK + N + SD D
Sbjct: 182 MQKSCLPGTKLDRQTQATSFIHQVFGGYLRSRVKCL----------NCKAVSDTFD---- 227
Query: 343 ITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQ 376
PFL + L++ P +E+ + P+
Sbjct: 228 --------PFLDITLEIKTAPNVSKALEQFVKPE 253
>gi|126310809|ref|XP_001371948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Monodelphis
domestica]
Length = 564
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R + L F D+
Sbjct: 209 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRLEVPSGGR-TQQELTEAFADVLGA 267
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F + V + F Q + EF+ L+ LH ++ R ++
Sbjct: 268 LWHPDSCEA-VNPTRF-RTVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 325
Query: 303 II 304
I+
Sbjct: 326 IL 327
>gi|302687378|ref|XP_003033369.1| hypothetical protein SCHCODRAFT_76094 [Schizophyllum commune H4-8]
gi|300107063|gb|EFI98466.1| hypothetical protein SCHCODRAFT_76094 [Schizophyllum commune H4-8]
Length = 1137
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--------PENYRHCKSPLVHRFGDLTRK 243
GL N+ T F+N +Q L L +FL P+N + FGDL +
Sbjct: 276 TGLTNLGNTCFMNSALQCLAHQEELTEYFLSGVFKQELNPDNPLGMHGAIAEAFGDLLQH 335
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSI 303
IW AR+ SP +F + + + + F Q + E +++LL+ LH DL K +
Sbjct: 336 IW-ARSSASSYSPRDFKMQLQRFAPQ-FSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYV 393
Query: 304 IYECFQ--GELEVVKEIPKNTISG----NDQNTEKGSDGGDDHDNITTETSRM-----PF 352
++ G+LE+ ++ K + G ND G + E ++ PF
Sbjct: 394 EKPDWEGGGDLELA-QLAKKSWDGYMLRNDSVIVDLFQGQYQSTLVCPECQKVSITFDPF 452
Query: 353 LMLGLDLP 360
+ L L LP
Sbjct: 453 MYLTLPLP 460
>gi|62087378|dbj|BAD92136.1| ubiquitin-specific protease 21 isoform b variant [Homo sapiens]
Length = 410
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRK 243
HVGL N+ T F+N +Q L PLR+F L +P R + L F D+
Sbjct: 239 HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE--LTEAFADVIGA 296
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL-RNTKKNTS 302
+WH + + V+P F +AV + F Q + EF+ L+ LH ++ R ++
Sbjct: 297 LWHPDSCEA-VNPTRF-RAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 354
Query: 303 II 304
I+
Sbjct: 355 IL 356
>gi|28972259|dbj|BAC65583.1| mKIAA0529 protein [Mus musculus]
gi|148692494|gb|EDL24441.1| ubiquitin specific peptidase 15, isoform CRA_c [Mus musculus]
Length = 955
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 237 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 296
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 297 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 353
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 354 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 413
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 414 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKI 473
>gi|291389465|ref|XP_002711347.1| PREDICTED: ubiquitin specific peptidase 15 isoform 1 [Oryctolagus
cuniculus]
Length = 952
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 293
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 294 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 350
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 351 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 410
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 411 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVIVPKI 470
>gi|431913411|gb|ELK15086.1| Ubiquitin carboxyl-terminal hydrolase 19 [Pteropus alecto]
Length = 1394
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 517 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 563
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 564 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 620
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 621 KASQFTGYAQHDAQEFMAFLLDGLHEDL 648
>gi|57529246|ref|NP_006668.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 4 [Homo sapiens]
gi|152031724|sp|O94966.2|UBP19_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; AltName: Full=Ubiquitin
thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19; AltName:
Full=Zinc finger MYND domain-containing protein 9
gi|148921559|gb|AAI46753.1| Ubiquitin specific peptidase 19 [Homo sapiens]
gi|168269530|dbj|BAG09892.1| ubiquitin carboxyl-terminal hydrolase 19 [synthetic construct]
Length = 1318
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 473 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 519
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 520 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 576
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 577 KASQFTGYAQHDAQEFMAFLLDGLHEDL 604
>gi|301770391|ref|XP_002920596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Ailuropoda melanoleuca]
Length = 1222
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 414 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 460
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 461 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 517
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 518 KASQFTGYAQHDAQEFMAFLLDGLHEDL 545
>gi|359078367|ref|XP_002697125.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Bos taurus]
Length = 1469
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 661 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 707
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 708 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS---KLKAIVAS 764
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 765 KASQFTGYAQHDAQEFMAFLLDGLHEDL 792
>gi|297812317|ref|XP_002874042.1| ubiquitin carboxyl-terminal hydrolase 8 [Arabidopsis lyrata subsp.
lyrata]
gi|297319879|gb|EFH50301.1| ubiquitin carboxyl-terminal hydrolase 8 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N ++Q L L +FFL +N K + FGDL R +
Sbjct: 299 TGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSL 358
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSII 304
W + V+P F +A + +F Q + E +++LL+ LH DL + +
Sbjct: 359 WAPGS--STVAPRTF-KAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVRNKPYVE 415
Query: 305 YECFQG--ELEVVKEIPKNTISGNDQ---NTEKGSDGGDDHDNITTETSRM--PFLMLGL 357
+ G + EV E +N ++ ND + +G I + S M PF+ L L
Sbjct: 416 AKDGDGRPDAEVADEYWRNHVARNDSIIVDLCQGQYKSTLVCPICKKVSVMFDPFMYLSL 475
Query: 358 DLP 360
LP
Sbjct: 476 PLP 478
>gi|326480980|gb|EGE04990.1| RING finger protein [Trichophyton equinum CBS 127.97]
Length = 663
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY-CLPDGY 179
CSV S +N++ CL+CG GR +HA+ H E H ++L +++V+ L DGY
Sbjct: 392 CSVCHSEVNLWICLICGNIGCGRYDGAHAFDHYKETSHSFAMDLTSQRVWDYLGDGY 448
>gi|359479088|ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
vinifera]
Length = 882
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKIW 245
GL N+ T F+N ++Q L L ++FL EN + FGDL RK+W
Sbjct: 285 GLQNLGNTCFMNSSLQCLAHTPKLVDYFLGDYSREINHENALGMDGEIALAFGDLIRKLW 344
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
V+P F + + + + F Q + E +++LL+ LH DL K I
Sbjct: 345 APG--ATPVAPRMFKSKLARFAPQ-FSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYIEA 401
Query: 306 ECFQG--ELEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLGLD 358
+ +G + EV E +N ++ ND S G + ++ PF+ L L
Sbjct: 402 KDGEGWPDEEVADEYWRNHLARNDSIIVDVSQGQYRSTLVCPVCKKVSITFDPFMYLSLP 461
Query: 359 LP 360
LP
Sbjct: 462 LP 463
>gi|326473980|gb|EGD97989.1| RING and UBP finger domain-containing protein [Trichophyton
tonsurans CBS 112818]
Length = 663
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY-CLPDGY 179
CSV S +N++ CL+CG GR +HA+ H E H ++L +++V+ L DGY
Sbjct: 392 CSVCHSEVNLWICLICGNIGCGRYDGAHAFDHYKETSHSFAMDLTSQRVWDYLGDGY 448
>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
Length = 442
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 10/145 (6%)
Query: 176 PDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVH 235
P+ ++ P++ I GL N+ T F+N +Q L PL N+ E+ CK
Sbjct: 111 PEKVKLQWPAVRRIG-AGLTNLGNTCFLNSVLQCLTYTPPLVNYLSSSEHAHTCKQVGFC 169
Query: 236 RFGDLTRKIWHARNFKGQ-VSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+L R GQ + PH LQ + K K G Q + EF+ ++++ +
Sbjct: 170 MVCELQRHFRRCYENGGQAIKPHAILQKI-KLIAKHMHWGRQEDAHEFLRYVIDAMQKSC 228
Query: 295 RN-------TKKNTSIIYECFQGEL 312
N K T++I + F G L
Sbjct: 229 LNGNTKLDRISKETTVINQIFGGFL 253
>gi|440895595|gb|ELR47745.1| Ubiquitin carboxyl-terminal hydrolase 43, partial [Bos grunniens
mutus]
Length = 1047
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--CKSPLVHRFGDLTRKIWHARNF 250
GL N T F+N +Q L L F + YR ++ + + L R +W R +
Sbjct: 10 GLKNHGNTCFMNAVVQCLSNTDLLAEFLAL-RRYRAEPGRAEVTEQLAALVRALW-TREY 67
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTS 302
Q+S EF AV K + F+ Q + +EF+ WLL+ +H DL + + S
Sbjct: 68 TPQLS-AEFKNAVSKYGAQ-FQGNAQHDALEFLLWLLDRVHEDLEGSSRGPS 117
>gi|402860151|ref|XP_003894498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 4
[Papio anubis]
Length = 1318
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 473 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 519
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 520 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 576
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 577 KASQFTGYAQHDAQEFMAFLLDGLHEDL 604
>gi|119585359|gb|EAW64955.1| ubiquitin specific peptidase 19, isoform CRA_a [Homo sapiens]
gi|119585360|gb|EAW64956.1| ubiquitin specific peptidase 19, isoform CRA_a [Homo sapiens]
Length = 1318
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 473 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 519
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 520 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 576
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 577 KASQFTGYAQHDAQEFMAFLLDGLHEDL 604
>gi|410951153|ref|XP_003982264.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Felis catus]
Length = 1222
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 414 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 460
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 461 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 517
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 518 KASQFTGYAQHDAQEFMAFLLDGLHEDL 545
>gi|387541264|gb|AFJ71259.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 4 [Macaca mulatta]
Length = 1318
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 473 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 519
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 520 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 576
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 577 KASQFTGYAQHDAQEFMAFLLDGLHEDL 604
>gi|354500243|ref|XP_003512210.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Cricetulus griseus]
Length = 1300
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 492 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 538
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 539 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHQAFQPSK---LKAIVAS 595
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 596 KASQFTGYAQHDAQEFMAFLLDGLHEDL 623
>gi|332817143|ref|XP_001160324.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Pan
troglodytes]
Length = 1318
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 473 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 519
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 520 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 576
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 577 KASQFTGYAQHDAQEFMAFLLDGLHEDL 604
>gi|4240271|dbj|BAA74914.1| KIAA0891 protein [Homo sapiens]
Length = 1371
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 526 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 572
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 573 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 629
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 630 KASQFTGYAQHDAQEFMAFLLDGLHEDL 657
>gi|397495158|ref|XP_003818427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Pan
paniscus]
Length = 1318
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 473 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 519
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 520 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 576
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 577 KASQFTGYAQHDAQEFMAFLLDGLHEDL 604
>gi|345787444|ref|XP_533832.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Canis lupus familiaris]
Length = 1222
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 414 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 460
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 461 ELRDFFHDRSFETEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 517
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 518 KASQFTGYAQHDAQEFMAFLLDGLHEDL 545
>gi|302686404|ref|XP_003032882.1| hypothetical protein SCHCODRAFT_32018 [Schizophyllum commune H4-8]
gi|300106576|gb|EFI97979.1| hypothetical protein SCHCODRAFT_32018, partial [Schizophyllum
commune H4-8]
Length = 300
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFF--------LIPENYRHCKSPLVHRFGDLTRKI 244
GL N+ T + N +Q L P FF + N K L F L ++
Sbjct: 4 GLKNLGNTCYANAPLQCLSATIPFAQFFKDTRWKNAINMHNTMGSKGVLSAAFAALVHQM 63
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W + + Q+ P EF++A+ +A ++++ Q + EF+S+LL+ +H DL K
Sbjct: 64 WSS---ESQLIPSEFMRAI-RAINEQYKGSDQHDSQEFLSFLLDGIHEDLNRILK 114
>gi|291389467|ref|XP_002711348.1| PREDICTED: ubiquitin specific peptidase 15 isoform 2 [Oryctolagus
cuniculus]
Length = 981
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 263 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 322
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 323 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 379
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 380 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 439
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K I+P++
Sbjct: 440 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVIVPKI 499
>gi|426340520|ref|XP_004034177.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 4
[Gorilla gorilla gorilla]
Length = 1318
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 473 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 519
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 520 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 576
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 577 KASQFTGYAQHDAQEFMAFLLDGLHEDL 604
>gi|410984363|ref|XP_003998498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
Length = 1304
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F N +Q L PL N+ L E+ + C + + I A +
Sbjct: 111 AGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNP 170
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-------KNTSII 304
G V F+ M+ + FR G Q + EF+ + ++ + N + T+++
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLV 230
Query: 305 YECFQGEL 312
+ F G L
Sbjct: 231 CQIFGGYL 238
>gi|440893719|gb|ELR46389.1| Ubiquitin carboxyl-terminal hydrolase 19 [Bos grunniens mutus]
Length = 1419
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 570 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 616
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 617 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 673
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 674 KASQFTGYAQHDAQEFMAFLLDGLHEDL 701
>gi|395537795|ref|XP_003770875.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Sarcophilus harrisii]
Length = 954
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 293
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 294 QEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSGYQQQ 350
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 351 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 410
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K ++P++
Sbjct: 411 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKI 470
>gi|332215900|ref|XP_003257080.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 4
[Nomascus leucogenys]
Length = 1318
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 473 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 519
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 520 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 576
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 577 KASQFTGYAQHDAQEFMAFLLDGLHEDL 604
>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
Length = 373
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFL-------IPENYRHCKSPLVHRFGDLTRKI 244
+GL N+ T F+N +Q L PL + L I + L F L + I
Sbjct: 34 LGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSI 93
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
W + N + +SP F + K + RF Q + EF+ +LL LH D+
Sbjct: 94 WRSSNGEYAISPQAFRSQIQKFA-PRFMGYSQQDSQEFLHYLLQGLHEDI 142
>gi|320166287|gb|EFW43186.1| ubiquitin specific peptidase 11 [Capsaspora owczarzaki ATCC 30864]
Length = 1643
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--------KSPLVHRFGDLTRK 243
GL N+ T F+N +Q L + PL ++F+ H K + +G L R+
Sbjct: 436 AGLRNLGNTCFMNSGLQCLSNIAPLTSYFVSNAFVDHINRDNPLGLKGKMADEYGALIRE 495
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
+W + F V+P+ F +A + + +F Q + EF+++LL+ LH DL K
Sbjct: 496 LWSGK-FDC-VAPNSFKKA-LGSFATQFAGYSQQDSQEFLAFLLDGLHEDLNRVLK 548
>gi|225439374|ref|XP_002270470.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
vinifera]
Length = 961
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKI 244
GL+NI T F+N IQ L+ L ++FL EN L FGDL RK+
Sbjct: 356 TGLHNIGNTCFMNSAIQCLVHTPKLVDYFLGDYRKEINYENPLGMNGELALAFGDLLRKL 415
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK 298
W V+P F + + + +F Q + EF+++LL+ LH DL K
Sbjct: 416 WAPG--ATPVAPRMF-KLKLSSFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVK 466
>gi|395537793|ref|XP_003770874.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Sarcophilus harrisii]
Length = 983
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 263 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 322
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 323 QEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSGYQQQ 379
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 380 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 439
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K ++P++
Sbjct: 440 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKI 499
>gi|52078392|gb|AAH82241.1| USP19 protein, partial [Homo sapiens]
Length = 1179
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 371 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 417
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 418 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 474
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 475 KASQFTGYAQHDAQEFMAFLLDGLHEDL 502
>gi|354500245|ref|XP_003512211.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Cricetulus griseus]
Length = 1323
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 515 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 561
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 562 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHQAFQPSK---LKAIVAS 618
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 619 KASQFTGYAQHDAQEFMAFLLDGLHEDL 646
>gi|345800049|ref|XP_546616.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Canis lupus
familiaris]
Length = 1076
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--KSPLVHRFGDLTRKIWHARNF 250
GL N T F+N +Q L L F + YR ++ + + L R +W R +
Sbjct: 62 GLKNHGNTCFMNAVVQCLSNTDLLAEFLAL-GRYRAAPGRAEVTEQLAALVRALW-TREY 119
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKN 300
Q+S EF AV K + F+ Q + +EF+ WLL+ +H DL + +
Sbjct: 120 TPQLS-AEFKNAVSKYGSQ-FQGNAQHDALEFLLWLLDRVHEDLEGSSRG 167
>gi|281338356|gb|EFB13940.1| hypothetical protein PANDA_009359 [Ailuropoda melanoleuca]
Length = 1359
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 514 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 560
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 561 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK---LKAIVAS 617
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 618 KASQFTGYAQHDAQEFMAFLLDGLHEDL 645
>gi|126339080|ref|XP_001363326.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Monodelphis domestica]
Length = 954
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 234 YCLPSYTTYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 293
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 294 QEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSGYQQQ 350
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 351 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 410
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K ++P++
Sbjct: 411 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKI 470
>gi|344254380|gb|EGW10484.1| Ubiquitin carboxyl-terminal hydrolase 19 [Cricetulus griseus]
Length = 1357
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V EK CLP G+ GL N+ T F+N IQSL
Sbjct: 549 HSPVSGDSVEEEEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 595
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 596 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHQAFQPSK---LKAIVAS 652
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 653 KASQFTGYAQHDAQEFMAFLLDGLHEDL 680
>gi|296084018|emb|CBI24406.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-------ENYRHCKSPLVHRFGDLTRKIW 245
GL N+ T F+N ++Q L L ++FL EN + FGDL RK+W
Sbjct: 261 GLQNLGNTCFMNSSLQCLAHTPKLVDYFLGDYSREINHENALGMDGEIALAFGDLIRKLW 320
Query: 246 HARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIY 305
V+P F + + + + F Q + E +++LL+ LH DL K I
Sbjct: 321 APG--ATPVAPRMFKSKLARFAPQ-FSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYI-- 375
Query: 306 ECFQGE----LEVVKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRM-----PFLMLG 356
E GE EV E +N ++ ND S G + ++ PF+ L
Sbjct: 376 EAKDGEGWPDEEVADEYWRNHLARNDSIIVDVSQGQYRSTLVCPVCKKVSITFDPFMYLS 435
Query: 357 LDLP 360
L LP
Sbjct: 436 LPLP 439
>gi|348568306|ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 1328
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 25/207 (12%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F N +Q L PL N+ L E+ + C + + I A +
Sbjct: 109 AGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNP 168
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-------KNTSII 304
G V F+ M+ + FR G Q + EF+ + ++ + N + T+++
Sbjct: 169 GDVIKPMFVINEMQRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLV 228
Query: 305 YECFQGELEV-VKEIPKNTISGNDQNTEKGSDGGDDHDNITTETSRMPFLMLGLD--LPP 361
+ F G L VK + N + SD D + +IT E P + L+ + P
Sbjct: 229 CQIFGGYLRSRVKCL----------NCKGVSDTFDPYLDITLEIKAAPSVNKALEQFVKP 278
Query: 362 PPL-----FKDVMEKNIIPQLQRLSGH 383
L +K K ++P +R + H
Sbjct: 279 EQLDGENSYKCSKCKKMVPASKRFTIH 305
>gi|126339078|ref|XP_001363243.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Monodelphis domestica]
Length = 983
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 263 YCLPSYTTYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 322
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 323 QEELNFDNPLGMRGEIAKSYAELIKQMWSGK--YSYVTPRAFKTQVGRFAPQ-FSGYQQQ 379
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 380 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 439
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K ++P++
Sbjct: 440 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKI 499
>gi|119911941|ref|XP_583534.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Bos taurus]
gi|297486804|ref|XP_002695928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Bos taurus]
gi|296476683|tpg|DAA18798.1| TPA: ubiquitin specific peptidase 43 [Bos taurus]
Length = 1121
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 175 LPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRH--CKSP 232
LP G P + GL N T F+N +Q L L F + YR ++
Sbjct: 88 LPAGDAARPPGAQ-----GLKNHGNTCFMNAVVQCLSNTDLLAEFLAL-RRYRAEPGRAE 141
Query: 233 LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHS 292
+ + L R +W R + Q+S EF AV K + F+ Q + +EF+ WLL+ +H
Sbjct: 142 VTEQLAALVRALW-TREYTPQLS-AEFKNAVSKYGAQ-FQGNAQHDALEFLLWLLDRVHE 198
Query: 293 DLRNTKKN 300
DL + +
Sbjct: 199 DLEGSSRG 206
>gi|259487365|tpe|CBF85985.1| TPA: RING and UBP finger domain protein, putative (AFU_orthologue;
AFUA_4G10360) [Aspergillus nidulans FGSC A4]
Length = 503
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY 173
CSV S++N++ CL+CG GR +HA+ H + H ++L T++V+
Sbjct: 234 CSVCHSDVNLWVCLICGNVGCGRYDGAHAFAHYSQTSHAFAMDLSTQRVW 283
>gi|432884788|ref|XP_004074587.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Oryzias
latipes]
Length = 926
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 90/248 (36%), Gaps = 59/248 (23%)
Query: 105 CPYLDTVNRQVLDFDFEK---FC-SVSLSNLNVYACLVCGKYYQGRGQK--SHAYTHSLE 158
CP+LD++ D +K C S N++ACL Y G G+ H+ H+
Sbjct: 7 CPHLDSIGEVTKDDLLKKSKGTCQSCGAGGPNLWACLQSDCPYVGCGESHSDHSTLHAQA 66
Query: 159 AGHHVYINLRTEKVYCLPDGYEI---NDPSLEDIRHV----------------------- 192
H++ +NL T +++C E+ P+L +
Sbjct: 67 KKHNLTVNLTTFRIWCYTCEREVFLDQRPALVPVPSAPHHCKAAEQDGAPQSGCRPLKAV 126
Query: 193 -----------------------GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENY-RH 228
G+ NI + ++N +Q+L PL FFL R
Sbjct: 127 PIAVAEEDGSESEEDELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFLDCSGLVRT 186
Query: 229 CKSP-LVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLL 287
K P L + L ++WH + V P + K FR Q + EF+ L+
Sbjct: 187 DKKPALCKSYQKLISELWHKKR-PSYVVPTSLSHGI-KLVNPMFRGYAQQDTQEFLRCLM 244
Query: 288 NTLHSDLR 295
+ LH +L+
Sbjct: 245 DQLHEELK 252
>gi|145519321|ref|XP_001445527.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412982|emb|CAK78130.1| unnamed protein product [Paramecium tetraurelia]
Length = 973
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--------KSPLVHRFGDLTRK 243
GL+N+ T F+N Q + PL +FL + + K LV R G L +K
Sbjct: 348 AGLSNLGNTCFMNSGTQCISNTVPLTEYFLSNQYFDEINMDNPIGTKGQLVKRVGSLLKK 407
Query: 244 IWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
+W+ K V+P + +AV + + F+ Q + E ++++L+ +H DL KK
Sbjct: 408 LWYGE--KSVVTPTNYKKAVGQF-QPMFKGYHQHDSSELITFVLDGIHEDLNRVKK 460
>gi|395852084|ref|XP_003798572.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Otolemur garnettii]
Length = 981
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 173 YCLPD-----GYEINDPSL--EDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP-- 223
YCLP Y+ ++P E GL+N+ T F+N IQ L PL +FL
Sbjct: 263 YCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKY 322
Query: 224 ------ENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQS 277
+N + + + +L +++W + V+P F V + + + F Q
Sbjct: 323 QEELNFDNPLGMRGEIAKSYAELIKQMWSGKF--SYVTPRAFKTQVGRFAPQ-FSGYQQQ 379
Query: 278 NPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELE--VVKEIPKNTISGNDQNTEKGSD 335
+ E +++LL+ LH DL +K I + G + V +E +N + ND
Sbjct: 380 DCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFH 439
Query: 336 GGDDHDNITTETSRM-----PFLMLGLDLPPP-------------PLFKDVMEKNIIPQL 377
G + E +++ PF L L LP PL K + K ++P++
Sbjct: 440 GLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLAKPMQYKVVVPKI 499
>gi|344234824|gb|EGV66692.1| hypothetical protein CANTEDRAFT_117870 [Candida tenuis ATCC 10573]
Length = 1163
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 180 EINDP--SLEDIRHVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCK--SPL-- 233
E+ DP SL H GL N+ T ++N +Q L+ V + +F + +PL
Sbjct: 293 EVFDPQNSLSSGGHSGLINLGNTCYMNSALQCLVHVPEINYYFFFDLFMKELNKTNPLGY 352
Query: 234 ----VHRFGDLTRKIWHARNFKG----QVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSW 285
FG L K++ ++ G +SP EF + S F+ Q + EF+SW
Sbjct: 353 NGNMAQSFGSLLHKLFSDQSVNGTSLNALSPREFKYTIGHYSS-MFQGYQQQDSQEFLSW 411
Query: 286 LLNTLHSDL 294
LL++LH DL
Sbjct: 412 LLDSLHEDL 420
>gi|327295194|ref|XP_003232292.1| RING and UBP finger domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326465464|gb|EGD90917.1| RING and UBP finger domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 669
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY-CLPDGY 179
CSV S +N++ CL+CG GR +HA+ H E H ++L +++V+ L DGY
Sbjct: 398 CSVCHSEVNLWICLICGNIGCGRYDGAHAFDHYKETSHSFAMDLTSQRVWDYLGDGY 454
>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
[Canis lupus familiaris]
Length = 1331
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F N +Q L PL N+ L E+ + C + + I A +
Sbjct: 111 AGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNP 170
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-------KNTSII 304
G V F+ M+ + FR G Q + EF+ + ++ + N + T+++
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLV 230
Query: 305 YECFQGEL 312
+ F G L
Sbjct: 231 CQIFGGYL 238
>gi|341894557|gb|EGT50492.1| hypothetical protein CAEBREN_16084 [Caenorhabditis brenneri]
Length = 1061
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 104 DCPYLDTVNRQVLD-FDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHH 162
DCP+L+ + L D CS V+ CL C KY GR HA H L H
Sbjct: 959 DCPHLNDIQPLPLAGIDASTTCSDCNIGAEVWTCLTCYKYNCGRFVHEHALMHHLSTSHP 1018
Query: 163 VYINLRTEKVYCLPDGYEINDPSLEDIRHVG 193
+ +++ V+C P ++ P L + G
Sbjct: 1019 MALSMADLSVWCYPCEAYVHHPILIPAKSAG 1049
>gi|402862840|ref|XP_003895748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Papio anubis]
Length = 1316
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F N +Q L PL N+ L E+ + C + + I A +
Sbjct: 111 AGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNP 170
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-------KNTSII 304
G V F+ M+ + FR G Q + EF+ + ++ + N + T+++
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLV 230
Query: 305 YECFQGEL 312
+ F G L
Sbjct: 231 CQIFGGYL 238
>gi|330926072|ref|XP_003301313.1| hypothetical protein PTT_12782 [Pyrenophora teres f. teres 0-1]
gi|311324069|gb|EFQ90584.1| hypothetical protein PTT_12782 [Pyrenophora teres f. teres 0-1]
Length = 2100
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 191 HVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYR-----HCKSPLVHR------FGD 239
HVGL N+ T ++N +Q L V L +FL N + + +P+ H+ +
Sbjct: 1108 HVGLTNLGNTCYMNSALQCLRSVEELSMYFL---NNKWKEEINVDNPIGHKGVIAKSYAG 1164
Query: 240 LTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
L I+ N VSP +F Q + KA+ G Q + EF+SWL++ LH DL K
Sbjct: 1165 LLSAIFSLDN-NSAVSPKDFKQKLGKANTLFSGYG-QQDSQEFVSWLVDALHEDLNRIHK 1222
>gi|302496053|ref|XP_003010031.1| hypothetical protein ARB_03733 [Arthroderma benhamiae CBS 112371]
gi|302655187|ref|XP_003019387.1| hypothetical protein TRV_06590 [Trichophyton verrucosum HKI 0517]
gi|291173566|gb|EFE29391.1| hypothetical protein ARB_03733 [Arthroderma benhamiae CBS 112371]
gi|291183105|gb|EFE38742.1| hypothetical protein TRV_06590 [Trichophyton verrucosum HKI 0517]
Length = 669
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 124 CSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVY-CLPDGY 179
CSV S +N++ CL+CG GR +HA+ H E H ++L +++V+ L DGY
Sbjct: 398 CSVCHSEVNLWICLICGNIGCGRYDGAHAFDHYKETSHSFAMDLTSQRVWDYLGDGY 454
>gi|426255424|ref|XP_004021348.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Ovis aries]
Length = 1264
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F N +Q L PL N+ L E+ + C + + I A +
Sbjct: 110 AGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNP 169
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-------KNTSII 304
G V F+ M+ + FR G Q + EF+ + ++ + N + T+++
Sbjct: 170 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLV 229
Query: 305 YECFQGEL 312
+ F G L
Sbjct: 230 CQIFGGYL 237
>gi|390462942|ref|XP_002806841.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 43 [Callithrix jacchus]
Length = 1123
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 193 GLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHC--KSPLVHRFGDLTRKIWHARNF 250
GL N T F+N +Q L L F + +YR ++ + + L R +W R +
Sbjct: 102 GLKNHGNTCFMNAVVQCLSNTDLLAEFLAL-GHYRAAPGRAEVTEQLAALVRALW-TREY 159
Query: 251 KGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNT 301
Q+S EF AV K + F+ Q + +EF+ WLL+ +H DL + + +
Sbjct: 160 TPQLS-AEFKNAVSKYGSQ-FQGNSQHDALEFLLWLLDRVHEDLEGSSRGS 208
>gi|383422111|gb|AFH34269.1| ubiquitin carboxyl-terminal hydrolase 42 [Macaca mulatta]
Length = 1317
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGDLTRKIWHARNFK 251
GL N+ T F N +Q L PL N+ L E+ + C + + I A +
Sbjct: 111 AGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNP 170
Query: 252 GQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTK-------KNTSII 304
G V F+ M+ + FR G Q + EF+ + ++ + N + T+++
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLV 230
Query: 305 YECFQGEL 312
+ F G L
Sbjct: 231 CQIFGGYL 238
>gi|270265851|ref|NP_663382.2| ubiquitin carboxyl-terminal hydrolase 19 isoform 5 [Mus musculus]
Length = 1299
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 155 HSLEAGHHVYINLRTEKVYCLPDGYEINDPSLEDIRHVGLNNIKETDFVNVTIQSLMRVT 214
HS +G V + EK CLP G+ GL N+ T F+N IQSL
Sbjct: 491 HSPVSGDSVEEDEEEEKKVCLP-GF------------TGLVNLGNTCFMNSVIQSLSNTR 537
Query: 215 PLRNFF--------LIPENYRHCKSPLVHRFGDLTRKIWHARNFKGQVSPHEFLQAVMKA 266
LR+FF + N L F L R +W + Q S L+A++ +
Sbjct: 538 ELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRALWKGTHQAFQPSK---LKAIVAS 594
Query: 267 SKKRFRIGVQSNPVEFMSWLLNTLHSDL 294
+F Q + EFM++LL+ LH DL
Sbjct: 595 KASQFTGYAQHDAQEFMAFLLDGLHEDL 622
>gi|449507201|ref|XP_004162960.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 9-like [Cucumis sativus]
Length = 915
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 192 VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI-------PENYRHCKSPLVHRFGDLTRKI 244
GL N+ T F+N +Q L+ PL +FL EN L FG+L RK+
Sbjct: 320 AGLQNLGNTCFMNSALQCLVHTPPLVEYFLQDYSEEINAENPLGMHGELAIAFGELLRKL 379
Query: 245 WHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKK 299
W + ++P F + + + + F Q + E +++LL+ LH DL K+
Sbjct: 380 WSGQT---TIAPRVFKGKLARFAPQ-FSGYNQHDSQELLAFLLDGLHEDLNRVKR 430
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,725,360,573
Number of Sequences: 23463169
Number of extensions: 311593022
Number of successful extensions: 1829320
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 2662
Number of HSP's that attempted gapping in prelim test: 1789697
Number of HSP's gapped (non-prelim): 30092
length of query: 387
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 243
effective length of database: 8,980,499,031
effective search space: 2182261264533
effective search space used: 2182261264533
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)