Query 016559
Match_columns 387
No_of_seqs 225 out of 1413
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 15:36:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016559.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016559hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 2.1E-43 7.2E-48 338.9 18.8 214 29-260 3-224 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 1.3E-39 4.5E-44 322.1 18.4 214 29-260 2-223 (333)
3 3tzt_A Glycosyl transferase fa 100.0 1.8E-31 6.1E-36 257.3 13.1 220 34-278 8-271 (276)
4 1g9r_A Glycosyl transferase; a 100.0 1.6E-30 5.4E-35 254.0 17.0 219 34-278 3-271 (311)
5 1qg8_A Protein (spore coat pol 69.3 26 0.00089 30.8 9.7 96 30-132 2-104 (255)
6 1fo8_A Alpha-1,3-mannosyl-glyc 67.4 23 0.00078 34.4 9.4 103 32-137 5-120 (343)
7 2d7i_A Polypeptide N-acetylgal 65.5 5.6 0.00019 40.9 4.9 102 28-138 111-219 (570)
8 3bcv_A Putative glycosyltransf 62.8 5.1 0.00017 35.1 3.5 91 29-132 5-100 (240)
9 2z86_A Chondroitin synthase; G 56.1 26 0.00089 35.8 7.9 95 29-132 93-190 (625)
10 3f1y_A Mannosyl-3-phosphoglyce 55.8 47 0.0016 32.4 9.4 95 28-128 93-191 (387)
11 1xhb_A Polypeptide N-acetylgal 51.9 19 0.00064 35.5 5.8 103 27-138 27-137 (472)
12 1o7q_A N-acetyllactosaminide a 48.0 24 0.00082 33.6 5.5 173 28-229 47-263 (289)
13 3ckj_A Putative uncharacterize 47.2 53 0.0018 30.7 8.0 103 28-137 47-154 (329)
14 3ioh_A Histo-blood group ABO s 39.6 33 0.0011 32.8 5.0 173 28-229 57-272 (298)
15 2ffu_A Ppgalnact-2, polypeptid 36.9 1.2E+02 0.0042 29.9 9.2 101 28-137 65-168 (501)
16 1s4n_A Glycolipid 2-alpha-mann 35.1 1.3E+02 0.0043 29.4 8.4 109 27-138 25-168 (348)
17 2p6w_A VP54, putative glycosyl 32.7 58 0.002 29.4 5.1 115 114-253 70-199 (213)
18 4ayl_A BOGT-metal-independent 29.2 60 0.002 30.2 4.9 164 31-229 3-217 (246)
19 2z86_A Chondroitin synthase; G 23.3 47 0.0016 33.9 3.3 92 28-132 374-470 (625)
20 2gak_A Beta-1,6-N-acetylglucos 22.4 2.1E+02 0.007 27.9 7.7 105 28-139 83-195 (391)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=2.1e-43 Score=338.92 Aligned_cols=214 Identities=33% Similarity=0.557 Sum_probs=181.8
Q ss_pred CCEEEEEEeeCcchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhcCcEEEEeeeeCCCCCC-----CCcchh
Q 016559 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQV-----RPKRFW 103 (387)
Q Consensus 29 ~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~ns~~dlVvLv~d~vs~e~~~~L~~~g~~v~~I~~i~~p~~~-----~~~~~~ 103 (387)
+++||||+++|++|+++++|+++||+++|+++++++|++++++++.+++|++.|.+++.|+.+..+... ...++.
T Consensus 3 ~~~AyvTl~td~~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~~~ 82 (263)
T 3u2u_A 3 TDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELG 82 (263)
T ss_dssp TTEEEEEEESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTTGG
T ss_pred cceEEEEEEECHHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcchh
Confidence 589999999999999999999999999999999999999999999999999999999888877654210 122356
Q ss_pred hhhhhhhccccccccEEEEEcCCeeecCCchHHhcChhhhhcc--CCCCcccceEEEEeCCHHHHHHHHHHHHhcCCCCC
Q 016559 104 GVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCANL--KHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTG 181 (387)
Q Consensus 104 ~sy~KL~~~~L~eydRVLYLDaD~lVl~nLdeLF~l~~~~Aa~--~~~~yfNSGVmvinps~~~~~~ile~~~~~~~~~~ 181 (387)
.+|+|+.+|++++||||||||+|++|++||||||+++.++|+. +++.|||||||||+|++.+++++++.+.+.+++.+
T Consensus 83 ~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~~~aA~~d~~~~~~fNsGv~li~p~~~~~~~l~~~~~~~~~~~~ 162 (263)
T 3u2u_A 83 VTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDG 162 (263)
T ss_dssp GGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECTTSTTSEEEEEEEECCCHHHHHHHHHHHHHHCCTTS
T ss_pred HHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCCcceEeccCCCCccccCeEEEEcccHHHHHHHHHHHHhcCCCCc
Confidence 7999999999999999999999999999999999999776653 56789999999999999999999999988778889
Q ss_pred ChHHHHHHHhcCCCCCcccCCCCCcccccCCCCCCcccccccccccccc-cccccccccCCCCcEEEEeeCCCCCCCCcc
Q 016559 182 GDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGL-YMLANKWMVDESELHVIHYTLGPLKPWDWW 260 (387)
Q Consensus 182 ~DQdiLN~~f~d~~~~~~f~p~~~~~~~~~~p~~~~~~Lp~~YN~~~~~-y~~~~~w~~~~~~~~IIHft~gp~KPW~~w 260 (387)
+|||+||.+|++++.. ..+.+||..||++.+. |...+.|....++++||||+ |+.|||+..
T Consensus 163 ~DQd~LN~~f~~w~~~-----------------~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~~~~IIHf~-g~~KPW~~~ 224 (263)
T 3u2u_A 163 GDQGILNTFFSSWATT-----------------DIRKHLPFIYNLSSISIYSYLPAFKVFGASAKVVHFL-GRVKPWNYT 224 (263)
T ss_dssp SHHHHHHHHTTTTTTS-----------------CGGGBCCGGGSEEHHHHHSSHHHHHHHGGGCSEEECC-SSSCGGGSE
T ss_pred ccHHHHHHHhcccccc-----------------CeeEeCCcccccccchhccccHHHHhhcCCeEEEEEC-CCCcCCCCC
Confidence 9999999999986310 1478999999998652 32233333345789999995 888999853
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=100.00 E-value=1.3e-39 Score=322.13 Aligned_cols=214 Identities=31% Similarity=0.540 Sum_probs=177.8
Q ss_pred CCEEEEEEeeCcchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhcCcEEEEeeeeCCCCCCC-----Ccchh
Q 016559 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVR-----PKRFW 103 (387)
Q Consensus 29 ~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~ns~~dlVvLv~d~vs~e~~~~L~~~g~~v~~I~~i~~p~~~~-----~~~~~ 103 (387)
+++||||+++|++|++++.|+++||+++++++++++|++++++++.++.|++.+..++.|+.+..+.... ..++.
T Consensus 2 s~~a~vt~~~d~~Yl~~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~~~ 81 (333)
T 1ll2_A 2 TDQAFVTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELG 81 (333)
T ss_dssp CSEEEEEEESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGGH
T ss_pred CceEEEEEEeCHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccchH
Confidence 6899999999999999999999999999999999999999999999999999998888887765432110 12245
Q ss_pred hhhhhhhccccccccEEEEEcCCeeecCCchHHhcChhhhhcc--CCCCcccceEEEEeCCHHHHHHHHHHHHhcCCCCC
Q 016559 104 GVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCANL--KHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTG 181 (387)
Q Consensus 104 ~sy~KL~~~~L~eydRVLYLDaD~lVl~nLdeLF~l~~~~Aa~--~~~~yfNSGVmvinps~~~~~~ile~~~~~~~~~~ 181 (387)
.+|+||.+|++++||||||||+|++|++||++||+++.++|+. +++.||||||||++|+...++++++.+.+.+++.+
T Consensus 82 ~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d~~~~~~fNsGvmlin~~~~~~~~l~~~~~~~~~~~~ 161 (333)
T 1ll2_A 82 VTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHVASEQGSFDG 161 (333)
T ss_dssp HHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECSSSTTSEEEEEEEECCCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEecCCCCcceeeeEEEEeCCHHHHHHHHHHHHhcCCCCC
Confidence 7899999999999999999999999999999999998766643 56789999999999999999999999988778889
Q ss_pred ChHHHHHHHhcCCCCCcccCCCCCcccccCCCCCCcccccccccccccc-cccccccccCCCCcEEEEeeCCCCCCCCcc
Q 016559 182 GDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGL-YMLANKWMVDESELHVIHYTLGPLKPWDWW 260 (387)
Q Consensus 182 ~DQdiLN~~f~d~~~~~~f~p~~~~~~~~~~p~~~~~~Lp~~YN~~~~~-y~~~~~w~~~~~~~~IIHft~gp~KPW~~w 260 (387)
+|||+||.+|.++... ..+..||..||+..+. |...+.+....++++||||+ |+.|||+.-
T Consensus 162 ~DQ~~LN~~f~~~~~~-----------------~~~~~Lp~~yN~~~~~~~~~~p~~~~~~~~~~IiHf~-g~~KPW~~~ 223 (333)
T 1ll2_A 162 GDQGLLNTFFNSWATT-----------------DIRKHLPFIYNLSSISIYSYLPAFKAFGANAKVVHFL-GQTKPWNYT 223 (333)
T ss_dssp SHHHHHHHHTTTTTTS-----------------CGGGBCCGGGSEETTHHHHTHHHHHHHGGGCSEEECC-SSCCGGGSC
T ss_pred CCHHHHHHHHHhhccc-----------------CccccCCcHHhcccccchhccHHHHhhcCCCEEEEEC-CCCCCCCCC
Confidence 9999999999875210 0246899999998753 32222222235689999995 888999864
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=99.97 E-value=1.8e-31 Score=257.27 Aligned_cols=220 Identities=21% Similarity=0.299 Sum_probs=152.7
Q ss_pred EEEeeCcchHHHHHHHHHHHHHhCCCCcEEE-EEcCCCCHHHHHHHHh----cCcEEEEeeeeCCCCCC--CCcch-hhh
Q 016559 34 VTLLYGDEFLLGVRVLGKSIRDTGSNKDMVV-LVSDGVSDYSKKLLKA----DGWIVEKISLLENPNQV--RPKRF-WGV 105 (387)
Q Consensus 34 vt~~tdd~Yl~~a~VL~~SL~~~ns~~dlVv-Lv~d~vs~e~~~~L~~----~g~~v~~I~~i~~p~~~--~~~~~-~~s 105 (387)
|++++|++|+.++.|++.||++++++.++.+ +++++++++.++.|++ .++++..+++-...... ...++ ..+
T Consensus 8 I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~ 87 (276)
T 3tzt_A 8 LLLTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFAKVTDRYPKEM 87 (276)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC-------------CHHH
T ss_pred EEEEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcCccccccCHHH
Confidence 3488999999999999999999998766643 6778999999888776 36666555432111111 12344 468
Q ss_pred hhhhhcccc-c-cccEEEEEcCCeeecCCchHHhcCh---hhhhccC------------------CCCcccceEEEEeCC
Q 016559 106 YTKLKIFNM-T-NYKKVVYLDADTIVIKNIEDLFKCR---KFCANLK------------------HSERLNSGVMVVEPS 162 (387)
Q Consensus 106 y~KL~~~~L-~-eydRVLYLDaD~lVl~nLdeLF~l~---~~~Aa~~------------------~~~yfNSGVmvinps 162 (387)
|+||+++++ + +++||||||+|++|++||+|||+++ ...||++ ...||||||||||++
T Consensus 88 ~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfNsGV~linl~ 167 (276)
T 3tzt_A 88 YYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYNSGLLLINLK 167 (276)
T ss_dssp HHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEEEEEEEEEHH
T ss_pred HHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEEeeEEEEEHH
Confidence 999999987 4 6999999999999999999999986 2233321 137999999999999
Q ss_pred HH----HHHHHHHHHHhcC-CCCCChHHHHHHHhcCCCCCcccCCCCCcccccCCCCCCcccccc-cccccccccc---c
Q 016559 163 AA----VFNDMMTKVNTLG-SYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLST-LYNADVGLYM---L 233 (387)
Q Consensus 163 ~~----~~~~ile~~~~~~-~~~~~DQdiLN~~f~d~~~~~~f~p~~~~~~~~~~p~~~~~~Lp~-~YN~~~~~y~---~ 233 (387)
+. ..+++++.+.+.. ++.++|||+||.+|.+ ++..||. .||++.+.+. .
T Consensus 168 ~~R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~----------------------~~~~Lp~~~wN~~~~~~~~~~~ 225 (276)
T 3tzt_A 168 RAREEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGD----------------------RIYPLDDLIYNYDARNYSSYLI 225 (276)
T ss_dssp HHHHHCCHHHHHHHHHHC--------CHHHHHHHGG----------------------GEEEEEHHHHSEETTCHHHHHH
T ss_pred HHHhhhHHHHHHHHHHhccccccCCChhHHHHHHhC----------------------CEEECCchheeeecccchhhhc
Confidence 64 4566777766553 5678999999999997 4789998 9999886432 1
Q ss_pred c--cccc--cCCCCcEEEEeeCCCCCCCCcccccCCCchhHHHHHHHHh
Q 016559 234 A--NKWM--VDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVKL 278 (387)
Q Consensus 234 ~--~~w~--~~~~~~~IIHft~gp~KPW~~w~~~~~~~~~~W~~~~~~l 278 (387)
. .++. ...++++||||+ |+.|||+....... -++|+.+....
T Consensus 226 ~~~~~~~~~~~~~~~~iiHy~-g~~KPW~~~~~~~~--~~~w~~Y~~~~ 271 (276)
T 3tzt_A 226 RSKKQADLAWLMDHTVVLHFC-GRDKPWKKNHRNKF--TSLYKHYMSLT 271 (276)
T ss_dssp HTTTCCSHHHHHHHCCEEECC-SSCCTTSTTCCSTT--HHHHHHHHHHH
T ss_pred cccchhhhhhhccCCeEEEEC-CCCCCcCCCCCCch--HHHHHHHHHHH
Confidence 1 1111 134679999995 88999997754322 36788776554
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=99.97 E-value=1.6e-30 Score=253.96 Aligned_cols=219 Identities=18% Similarity=0.277 Sum_probs=157.8
Q ss_pred EEEeeCcchHHHHHHHHHHH-HHhCCCCcE-EEEEcCCCCHHHHHHHHhc----CcEEEEeeeeCCCCCCC---Ccch-h
Q 016559 34 VTLLYGDEFLLGVRVLGKSI-RDTGSNKDM-VVLVSDGVSDYSKKLLKAD----GWIVEKISLLENPNQVR---PKRF-W 103 (387)
Q Consensus 34 vt~~tdd~Yl~~a~VL~~SL-~~~ns~~dl-VvLv~d~vs~e~~~~L~~~----g~~v~~I~~i~~p~~~~---~~~~-~ 103 (387)
|++++|++|+.++.|+++|| ++++ +.++ +++++++++++.++.|++. +..+..+++-....... ..++ .
T Consensus 3 I~~~~d~~Y~~~~~vli~Sl~l~~~-~~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~s~ 81 (311)
T 1g9r_A 3 IVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLNIRHISI 81 (311)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHTCT-TSCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCCCTTCCG
T ss_pred EEEECCHhHHHHHHHHHHHHHHHcC-CCCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCccccccCCH
Confidence 56889999999999999999 6654 3344 3355788999999888874 55555444211100011 1232 4
Q ss_pred hhhhhhhcccc-ccccEEEEEcCCeeecCCchHHhcCh---hhhhcc---------------C---CCCcccceEEEEeC
Q 016559 104 GVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCR---KFCANL---------------K---HSERLNSGVMVVEP 161 (387)
Q Consensus 104 ~sy~KL~~~~L-~eydRVLYLDaD~lVl~nLdeLF~l~---~~~Aa~---------------~---~~~yfNSGVmvinp 161 (387)
.+|.||+++++ ++||||||||+|++|++||+|||+++ ..+||+ + ...||||||||+|+
T Consensus 82 ~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfNsGv~linl 161 (311)
T 1g9r_A 82 TTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAGVLLINL 161 (311)
T ss_dssp GGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEEEEEECH
T ss_pred HHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEeeeeeeeeH
Confidence 68999999995 89999999999999999999999985 223321 1 34699999999999
Q ss_pred CH----HHHHHHHHHHHhc-CCCCCChHHHHHHHhcCCCCCcccCCCCCcccccCCCCCCccccccccccccccccccc-
Q 016559 162 SA----AVFNDMMTKVNTL-GSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYMLAN- 235 (387)
Q Consensus 162 s~----~~~~~ile~~~~~-~~~~~~DQdiLN~~f~d~~~~~~f~p~~~~~~~~~~p~~~~~~Lp~~YN~~~~~y~~~~- 235 (387)
+. ..++++++.+.+. .+..++|||+||.+|.+ ++..||..||...+.+....
T Consensus 162 ~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~----------------------~~~~Lp~~wN~~~~~~~~~~~ 219 (311)
T 1g9r_A 162 KKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKG----------------------GVCYANSRFNFMPTNYAFMAN 219 (311)
T ss_dssp HHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTT----------------------SEEEECGGGSBCHHHHHTCC-
T ss_pred HHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcC----------------------CEEEcChhhccCcchhhHHhh
Confidence 96 4577888887754 35678999999999987 47899999999865421100
Q ss_pred --------cc----ccCCCCcEEEEeeCCCCCCCCcccccCCCchhHHHHHHHHh
Q 016559 236 --------KW----MVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVKL 278 (387)
Q Consensus 236 --------~w----~~~~~~~~IIHft~gp~KPW~~w~~~~~~~~~~W~~~~~~l 278 (387)
.| ....++++||||+ |+.|||+.+..+... +.|+.+..++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~iiHy~-g~~KPW~~~~~~~~~--~~~~~~~~~~ 271 (311)
T 1g9r_A 220 WFASRHTDPLYRDRTNTVMPVAVSHYC-GPAKPWHRDCTAWGA--ERFTELAGSL 271 (311)
T ss_dssp ---CSCCCHHHHHHHSCCSSCSEEECC-SSCCTTSSSCCSTTT--HHHHHHHHTC
T ss_pred hcccccchhhhhHHhhccCCCEEEEeC-CcCCCCCCCCCCccH--HHHHHHHHhh
Confidence 01 1234688999995 888999987654432 5666666554
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=69.29 E-value=26 Score=30.76 Aligned_cols=96 Identities=13% Similarity=0.158 Sum_probs=53.0
Q ss_pred CEEEEEEeeCc-chHHHHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhc--CcEEEEeeeeCCCCCC---CCcch
Q 016559 30 DQAYVTLLYGD-EFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKAD--GWIVEKISLLENPNQV---RPKRF 102 (387)
Q Consensus 30 ~~Ayvt~~tdd-~Yl~~a~VL~~SL~~~n-s~~dlVvLv~d~vs~e~~~~L~~~--g~~v~~I~~i~~p~~~---~~~~~ 102 (387)
+.+.++-++|. .+ +.-++.||.... ++.. +++++++-++++.+.+++. ...++ ++..+... ++...
T Consensus 2 ~vSViIp~yn~~~~---l~~~l~Sl~~q~~~~~e-iivvDd~S~d~t~~~~~~~~~~~~i~---~i~~~~~~~~~~~~n~ 74 (255)
T 1qg8_A 2 KVSVIMTSYNKSDY---VAKSISSILSQTFSDFE-LFIMDDNSNEETLNVIRPFLNDNRVR---FYQSDISGVKERTEKT 74 (255)
T ss_dssp CEEEEEEESSCTTT---HHHHHHHHHTCSCCCEE-EEEEECSCCHHHHHHHGGGGGSTTEE---EEECCCCSHHHHHSSC
T ss_pred eEEEEEEcCCCHHH---HHHHHHHHHhccCCceE-EEEEECCCCchHHHHHHHHhhcCCEE---EEeccccccccccccc
Confidence 46677777775 45 444677777643 3333 5667777778888888775 22232 22222000 00010
Q ss_pred hhhhhhhhccccccccEEEEEcCCeeecCC
Q 016559 103 WGVYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (387)
Q Consensus 103 ~~sy~KL~~~~L~eydRVLYLDaD~lVl~n 132 (387)
-....+=...+..+.|-|++||+|.++..+
T Consensus 75 G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~ 104 (255)
T 1qg8_A 75 RYAALINQAIEMAEGEYITYATDDNIYMPD 104 (255)
T ss_dssp HHHHHHHHHHHHCCCSEEEEEETTEEECTT
T ss_pred CHHHHHHHHHHHcCCCEEEEeCCCCccChH
Confidence 111122223334577899999999998655
No 6
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=67.42 E-value=23 Score=34.38 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=59.2
Q ss_pred EEEEEeeCcchHHHHHHHHHHHHHhCCC--CcEEEEEcCCCCHHHHHHHHhcCcEEEEeeeeCCCCCC-CCcch-hhhhh
Q 016559 32 AYVTLLYGDEFLLGVRVLGKSIRDTGSN--KDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQV-RPKRF-WGVYT 107 (387)
Q Consensus 32 Ayvt~~tdd~Yl~~a~VL~~SL~~~ns~--~dlVvLv~d~vs~e~~~~L~~~g~~v~~I~~i~~p~~~-~~~~~-~~sy~ 107 (387)
+.+.+++|.. . +.-++.||++..+. ...+++..|+-.++.++.+++.+..+..+..-+..... +++.. ...|.
T Consensus 5 pViI~~yNRp--~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~~y~ 81 (343)
T 1fo8_A 5 PILVIACDRS--T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQGYY 81 (343)
T ss_dssp CEEEEESSCT--T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHHHH
T ss_pred cEEEEECCcH--H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhcCcccch
Confidence 4566777765 2 67788999998753 23566677778888889888865433222110000000 11110 00011
Q ss_pred ---------hhhccccccccEEEEEcCCeeecCCchHHh
Q 016559 108 ---------KLKIFNMTNYKKVVYLDADTIVIKNIEDLF 137 (387)
Q Consensus 108 ---------KL~~~~L~eydRVLYLDaD~lVl~nLdeLF 137 (387)
.=.+|+..++++||.||-|+++-.+.=+.|
T Consensus 82 ~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~ 120 (343)
T 1fo8_A 82 KIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYF 120 (343)
T ss_dssp HHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHH
T ss_pred hHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHH
Confidence 112233347999999999999987754433
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=65.48 E-value=5.6 Score=40.95 Aligned_cols=102 Identities=15% Similarity=0.120 Sum_probs=58.1
Q ss_pred CCCEEEEEEeeCcchHHHHHHHHHHHHHhCCCC-c-EEEEEcCCCCHHH-HHHHHhc---CcEEEEeeeeCCCCCCCCcc
Q 016559 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNK-D-MVVLVSDGVSDYS-KKLLKAD---GWIVEKISLLENPNQVRPKR 101 (387)
Q Consensus 28 ~~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~ns~~-d-lVvLv~d~vs~e~-~~~L~~~---g~~v~~I~~i~~p~~~~~~~ 101 (387)
.++...|..++|.. +..+.-++.||....... . -||+++++-++++ .+.|++. ...+ .++..+.. ..
T Consensus 111 ~P~vSVIIp~yNe~-~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v---~vi~~~~n---~G 183 (570)
T 2d7i_A 111 LPNTSIIIPFHNEG-WSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSV---RILRTKKR---EG 183 (570)
T ss_dssp CCCEEEEEEESSCC-HHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTE---EEEECSSC---CC
T ss_pred CCCeEEEEEECCCC-HHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeE---EEEECCCC---CC
Confidence 46788888888875 455667788888776533 2 2566766655555 5555542 2222 22322211 11
Q ss_pred hhhhhhhhhccccccccEEEEEcCCeeecCC-chHHhc
Q 016559 102 FWGVYTKLKIFNMTNYKKVVYLDADTIVIKN-IEDLFK 138 (387)
Q Consensus 102 ~~~sy~KL~~~~L~eydRVLYLDaD~lVl~n-LdeLF~ 138 (387)
+ .-.+-...+...-|-|++||+|+++..+ |.+|..
T Consensus 184 ~--~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~ 219 (570)
T 2d7i_A 184 L--IRTRMLGASVATGDVITFLDSHCEANVNWLPPLLD 219 (570)
T ss_dssp H--HHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHH
T ss_pred H--HHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHH
Confidence 1 1222333334456889999999999654 454443
No 8
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=62.76 E-value=5.1 Score=35.11 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=50.2
Q ss_pred CCEEEEEEeeCc-chHHHHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhc---CcEEEEeeeeCCCCCCCCcchh
Q 016559 29 TDQAYVTLLYGD-EFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKAD---GWIVEKISLLENPNQVRPKRFW 103 (387)
Q Consensus 29 ~~~Ayvt~~tdd-~Yl~~a~VL~~SL~~~n-s~~dlVvLv~d~vs~e~~~~L~~~---g~~v~~I~~i~~p~~~~~~~~~ 103 (387)
++...+.-++|. +|+ .-++.||.... ++.. +++++++-++++.+.+++. ...++- +..++.+ ..
T Consensus 5 p~vsViIp~yn~~~~l---~~~l~Sl~~q~~~~~e-iIvvDd~S~d~t~~~~~~~~~~~~~i~~---i~~~n~G----~~ 73 (240)
T 3bcv_A 5 PKVSVIVPIYNVEKYL---DQCVQALLAQTLSDIE-IILIDDESPDNCPKICDDYAAQYPNIKV---IHKKNAG----LG 73 (240)
T ss_dssp CSEEEEEEESSCTTTH---HHHHHHHHTCSSSSEE-EEEEECCCSSSHHHHHHHHHHHCSSEEE---EECCCCC----HH
T ss_pred CcEEEEEecCCCHHHH---HHHHHHHHhCcCCCeE-EEEEECCCCcCHHHHHHHHHhhCCCEEE---EECCCCC----hH
Confidence 467888888885 464 45667877643 3333 5567666556666666553 222322 2222211 11
Q ss_pred hhhhhhhccccccccEEEEEcCCeeecCC
Q 016559 104 GVYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (387)
Q Consensus 104 ~sy~KL~~~~L~eydRVLYLDaD~lVl~n 132 (387)
.. +=...+...-|-|++||+|.++..+
T Consensus 74 ~a--~N~g~~~a~g~~i~~lD~Dd~~~~~ 100 (240)
T 3bcv_A 74 MA--CNSGLDVATGEYVAFCDSDDYVDSD 100 (240)
T ss_dssp HH--HHHHHHHCCSSEEEECCTTCCCCTT
T ss_pred HH--HHHHHHHcCCCEEEEECCCCcCCHH
Confidence 11 1122233456889999999988554
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=56.09 E-value=26 Score=35.83 Aligned_cols=95 Identities=12% Similarity=0.108 Sum_probs=55.0
Q ss_pred CCEEEEEEeeCcchHHHHHHHHHHHHHhCCCCcE-EEEEcCCCCHHHHHHHHhcC--cEEEEeeeeCCCCCCCCcchhhh
Q 016559 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKADG--WIVEKISLLENPNQVRPKRFWGV 105 (387)
Q Consensus 29 ~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~ns~~dl-VvLv~d~vs~e~~~~L~~~g--~~v~~I~~i~~p~~~~~~~~~~s 105 (387)
++.+.+.-++|.. ..+.-++.||.......+. |++++++-++++.+.+++.. ..+..+. .++.... . .
T Consensus 93 p~vsviIp~~n~~--~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~---~~~~~~g--~--~ 163 (625)
T 2z86_A 93 DGLSIVIPTYNRA--KILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVR---QKDYGYQ--L--C 163 (625)
T ss_dssp CCEEEEEEESSCH--HHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEE---ECCCSCC--H--H
T ss_pred CcEEEEEecCCcH--HHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEE---eCCCCcc--h--h
Confidence 4677887788863 4455678888876533244 55676666666777777652 2232222 2221100 0 1
Q ss_pred hhhhhccccccccEEEEEcCCeeecCC
Q 016559 106 YTKLKIFNMTNYKKVVYLDADTIVIKN 132 (387)
Q Consensus 106 y~KL~~~~L~eydRVLYLDaD~lVl~n 132 (387)
-.+-........|-|+++|+|+++-.+
T Consensus 164 ~a~N~g~~~a~g~~v~~lD~D~~~~~~ 190 (625)
T 2z86_A 164 AVRNLGLRAAKYNYVAILDCDMAPNPL 190 (625)
T ss_dssp HHHHHHHHHCCSSEEEEECTTEEECTT
T ss_pred HHHHHHHHhCCcCEEEEECCCCCCCHH
Confidence 112223334578999999999999654
No 10
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=55.82 E-value=47 Score=32.43 Aligned_cols=95 Identities=14% Similarity=0.080 Sum_probs=55.4
Q ss_pred CCCEEEEEEeeCc-chHHHHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhcCcEEEEee--eeCCCCCCCCcchh
Q 016559 28 STDQAYVTLLYGD-EFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKADGWIVEKIS--LLENPNQVRPKRFW 103 (387)
Q Consensus 28 ~~~~Ayvt~~tdd-~Yl~~a~VL~~SL~~~n-s~~dlVvLv~d~vs~e~~~~L~~~g~~v~~I~--~i~~p~~~~~~~~~ 103 (387)
..+...|.-++|+ .++..++-.+.++.... ...+ |++++++=++.+.+.+++.+.++.... ++..+. ...
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~E-IIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~---n~G-- 166 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQ-ILVVDADSEDGTAGVAASHGAEVYSENELMSGYGD---AHG-- 166 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSE-EEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCS---CCS--
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeE-EEEEcCcCCccHHHHHHHhCchhcccceeEecCCc---cCC--
Confidence 4678888888986 46555444444332223 3444 566777777778888888877653321 111111 111
Q ss_pred hhhhhhhccccccccEEEEEcCCee
Q 016559 104 GVYTKLKIFNMTNYKKVVYLDADTI 128 (387)
Q Consensus 104 ~sy~KL~~~~L~eydRVLYLDaD~l 128 (387)
..-..-..+.....|-|+++|+|..
T Consensus 167 ~g~A~n~G~~~A~gd~i~~lDaD~~ 191 (387)
T 3f1y_A 167 KGDAMWRALSVTRGDLVLYIDADTR 191 (387)
T ss_dssp HHHHHHHHTTTCCSSEEEECCTTCS
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCCC
Confidence 1122223334457899999999998
No 11
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=51.92 E-value=19 Score=35.54 Aligned_cols=103 Identities=16% Similarity=0.197 Sum_probs=56.0
Q ss_pred CCCCEEEEEEeeCcchHHHHHHHHHHHHHhCCCCc-E-EEEEcCCCCH-HHHHHHHhc----CcEEEEeeeeCCCCCCCC
Q 016559 27 QSTDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKD-M-VVLVSDGVSD-YSKKLLKAD----GWIVEKISLLENPNQVRP 99 (387)
Q Consensus 27 ~~~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~ns~~d-l-VvLv~d~vs~-e~~~~L~~~----g~~v~~I~~i~~p~~~~~ 99 (387)
+.++.+.|..++|.. ...+.-++.||........ . ||+++++-++ +..+.|++. ...++ ++..+..
T Consensus 27 ~~p~vSVIIp~yN~~-~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~---vi~~~~n--- 99 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEA-WSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVH---VIRMEQR--- 99 (472)
T ss_dssp CCCCEEEEEEESSCC-HHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEE---EEECSSC---
T ss_pred CCCCeEEEEEeCCCC-HHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEE---EEECCCC---
Confidence 356788888888864 1334457888888654321 2 5566655443 355555542 21232 2322211
Q ss_pred cchhhhhhhhhccccccccEEEEEcCCeeecCC-chHHhc
Q 016559 100 KRFWGVYTKLKIFNMTNYKKVVYLDADTIVIKN-IEDLFK 138 (387)
Q Consensus 100 ~~~~~sy~KL~~~~L~eydRVLYLDaD~lVl~n-LdeLF~ 138 (387)
... .-.+-...+...-|-|++||+|+++..+ |.+|..
T Consensus 100 ~G~--~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~ 137 (472)
T 1xhb_A 100 SGL--IRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLA 137 (472)
T ss_dssp CCH--HHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHH
T ss_pred CCh--HHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHH
Confidence 111 1122223334567899999999998765 444443
No 12
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=48.03 E-value=24 Score=33.62 Aligned_cols=173 Identities=13% Similarity=0.124 Sum_probs=95.8
Q ss_pred CCCEEEEEEeeCcchH-HHHHHHHHHHHHhC-CCCcEEE-EEcCCCCHHHHHHHHhcCcEEEEeeeeCCCCCCCCcchh-
Q 016559 28 STDQAYVTLLYGDEFL-LGVRVLGKSIRDTG-SNKDMVV-LVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFW- 103 (387)
Q Consensus 28 ~~~~Ayvt~~tdd~Yl-~~a~VL~~SL~~~n-s~~dlVv-Lv~d~vs~e~~~~L~~~g~~v~~I~~i~~p~~~~~~~~~- 103 (387)
.-+.+...++++ .|. .-..-.+.|--++- +++.++. +.+|+.+. ... -..|. .+.+.++..+ ...+|.
T Consensus 47 n~tIGl~vfa~G-kY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFTD~~~~--~p~-v~l~~-~r~~~V~~i~---~~~~W~d 118 (289)
T 1o7q_A 47 KITVGLTVFAVG-RYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSR--MPL-IELGP-LRSFKVFKIK---PEKRWQD 118 (289)
T ss_dssp TCCEEEEEEECT-THHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGG--CCC-CCCCT-TEEEEEEECC---CCSSHHH
T ss_pred CCeEEEEEEEec-ccHHHHHHHHHHHHHHhccCCCeEEEEEEeCChhh--CCc-cccCC-CCeEEEEEec---cccCCch
Confidence 457788878877 577 66677777777763 5666644 45654211 000 00110 0122222222 233463
Q ss_pred hhhhhhhccc-------cccccEEEEEcCCeeecCCchHHhcChhh-----------------------hhc-cC---CC
Q 016559 104 GVYTKLKIFN-------MTNYKKVVYLDADTIVIKNIEDLFKCRKF-----------------------CAN-LK---HS 149 (387)
Q Consensus 104 ~sy~KL~~~~-------L~eydRVLYLDaD~lVl~nLdeLF~l~~~-----------------------~Aa-~~---~~ 149 (387)
.+..|+.++. +.++|=+..+|+|+++.+++..= .++.. ++| ++ ..
T Consensus 119 ~sm~Rm~~i~~~~~~~~~~evDYLf~~dvd~~F~~~vG~E-~Lg~lv~~lHp~~y~~~~~~fpYERrp~S~AyIp~~eGd 197 (289)
T 1o7q_A 119 ISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVE-TLGESVAQLQAWWYKADPNDFTYERRKESAAYIPFGEGD 197 (289)
T ss_dssp HHHHHHHHHHHHHHHTHHHHCSEEEEECSSEEECSCBCGG-GCSSEEEEECTTTTTSCGGGSCCCCCTTSTTCCCTTCCS
T ss_pred hHHHHHHHHHHHHHHHHhhcCCEEEEeeCCcEeeccCCHH-HHHHHHHccCHHHhCCCCCCCCCCCCcCceeeecCCCCC
Confidence 4666666653 25899999999999999987431 11111 111 22 23
Q ss_pred CcccceEEEEeCCH------HHHHHHHHHHHhcCCCCCChHHHHHHHhcCCCCCcccCCCCCcccccCCCCCCccccccc
Q 016559 150 ERLNSGVMVVEPSA------AVFNDMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTL 223 (387)
Q Consensus 150 ~yfNSGVmvinps~------~~~~~ile~~~~~~~~~~~DQdiLN~~f~d~~~~~~f~p~~~~~~~~~~p~~~~~~Lp~~ 223 (387)
-|+-+|+.-=.+.+ .-.+.|++-..+.-.-.++|..=||.+|-... ....||..
T Consensus 198 fYY~Ga~fGGt~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~K--------------------PtKvLSPE 257 (289)
T 1o7q_A 198 FYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNK--------------------PTKILSPE 257 (289)
T ss_dssp CCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSC--------------------CSEEECGG
T ss_pred EEEEceeeCCcHHHHHHHHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcC--------------------CCEEECHH
Confidence 56666666444442 22223333333333346899999999975431 24569999
Q ss_pred cccccc
Q 016559 224 YNADVG 229 (387)
Q Consensus 224 YN~~~~ 229 (387)
|+++.+
T Consensus 258 Y~wd~~ 263 (289)
T 1o7q_A 258 YCWDYH 263 (289)
T ss_dssp GSBCGG
T ss_pred HCCCcc
Confidence 998765
No 13
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=47.22 E-value=53 Score=30.70 Aligned_cols=103 Identities=17% Similarity=0.093 Sum_probs=60.2
Q ss_pred CCCEEEEEEeeCcchHHHHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhcCcEEE-EeeeeC-CCCCCCCcchhh
Q 016559 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKADGWIVE-KISLLE-NPNQVRPKRFWG 104 (387)
Q Consensus 28 ~~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~n-s~~dlVvLv~d~vs~e~~~~L~~~g~~v~-~I~~i~-~p~~~~~~~~~~ 104 (387)
.++...|.-++|+. ..+.-++.||.... +...-+++++++-++++.+.+++.+..+. .+.++. .+. ......
T Consensus 47 ~~~vSViIp~yN~~--~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~---n~G~~~ 121 (329)
T 3ckj_A 47 GRTISVVLPALDEE--DTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPI---RPGKGE 121 (329)
T ss_dssp TCCEEEEEEESSCT--TTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCC---CCSHHH
T ss_pred CCcEEEEEeeCCCH--HHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCC---CCCHHH
Confidence 46788888888863 22455677887764 33223566777777778888888877653 233331 111 111111
Q ss_pred hhhhhhccccccccEEEEEcCCee-ecCC-chHHh
Q 016559 105 VYTKLKIFNMTNYKKVVYLDADTI-VIKN-IEDLF 137 (387)
Q Consensus 105 sy~KL~~~~L~eydRVLYLDaD~l-Vl~n-LdeLF 137 (387)
.. -.......-|-|+++|+|.+ +..+ +..+.
T Consensus 122 a~--n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~ 154 (329)
T 3ckj_A 122 AL--WRSLAASRGDIVVFVDSDLINPHPMFVPWLV 154 (329)
T ss_dssp HH--HHHHHHCCCSEEEECCTTEESCCTTHHHHHH
T ss_pred HH--HHHHHhCCCCEEEEECCCCCCcChHHHHHHH
Confidence 11 22223456689999999999 6533 44443
No 14
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=39.62 E-value=33 Score=32.79 Aligned_cols=173 Identities=14% Similarity=0.132 Sum_probs=96.2
Q ss_pred CCCEEEEEEeeCcchHHHHHHHHHHHHHhC-CCCcEEE-EEcCCCCHHHHHHHH-hcCcEEEEeeeeCCCCCCCCcchh-
Q 016559 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMVV-LVSDGVSDYSKKLLK-ADGWIVEKISLLENPNQVRPKRFW- 103 (387)
Q Consensus 28 ~~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~n-s~~dlVv-Lv~d~vs~e~~~~L~-~~g~~v~~I~~i~~p~~~~~~~~~- 103 (387)
..+.+.++++++ .|+....-.+.|-.++- ++++++. +.+|+.+. ...+. ..+.+ +.++..+ ...+|.
T Consensus 57 n~tIGl~vfA~G-kY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~~~~--vP~v~l~~~r~---~~V~~v~---~~~~Wqd 127 (298)
T 3ioh_A 57 NTTIGLTVFAIK-KYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAA--VPRVTLGTGRQ---LSVLEVR---AYKRWQD 127 (298)
T ss_dssp TCEEEEEEEECG-GGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGGG--SCCCCCCTTEE---EEEEECC---CCSSHHH
T ss_pred CCcEEEEEEEeC-cHHHHHHHHHHhHHHhccCCceEEEEEEeCChhh--CCccccCCCCe---EEEEEec---cccCCcc
Confidence 456777777877 47666666777777764 5666543 45654221 00000 01222 2222222 234563
Q ss_pred hhhhhhhccc-------cccccEEEEEcCCeeecCCch--HH---hcC--hh--------h-------h-hcc--C-CCC
Q 016559 104 GVYTKLKIFN-------MTNYKKVVYLDADTIVIKNIE--DL---FKC--RK--------F-------C-ANL--K-HSE 150 (387)
Q Consensus 104 ~sy~KL~~~~-------L~eydRVLYLDaD~lVl~nLd--eL---F~l--~~--------~-------~-Aa~--~-~~~ 150 (387)
.+..|+.++. +.|+|=+..+|+|+.+.+++. .| +.. +. + + |-+ + ..-
T Consensus 128 ~sm~Rm~~i~~~~~~~~~~EvDyLfc~dvd~~F~~~vG~E~Lg~lva~lHp~~y~~~~~~FpYERrp~S~AyIp~~eGdf 207 (298)
T 3ioh_A 128 VSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIPKDEGDF 207 (298)
T ss_dssp HHHHHHHHHHHHHHHTHHHHCSEEEEEESSEEECSCBCGGGCSSEEEEBCTTTTTSCGGGSCCCCCTTSTTCCCTTCCSC
T ss_pred ccHHHHHHHHHHHHHHHhhcCCEEEEecCCCeeccCccHHHhHhhHhhcChhhhcCCcccCcccCCccccccccCCCCCe
Confidence 4666776663 257999999999999999853 22 221 10 0 1 112 2 234
Q ss_pred cccceEEEEeCCH--H----HHHHHHHHHHhcCCCCCChHHHHHHHhcCCCCCcccCCCCCcccccCCCCCCcccccccc
Q 016559 151 RLNSGVMVVEPSA--A----VFNDMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLY 224 (387)
Q Consensus 151 yfNSGVmvinps~--~----~~~~ile~~~~~~~~~~~DQdiLN~~f~d~~~~~~f~p~~~~~~~~~~p~~~~~~Lp~~Y 224 (387)
|+-+|+.-=.+.+ + -.+.|++-..+.-.-.++|..=||.||-... ....||..|
T Consensus 208 YY~ga~fGGt~~~vl~Lt~~C~~~i~~D~~n~IeA~WhDESHLNKYfl~hK--------------------PtKvLSPEY 267 (298)
T 3ioh_A 208 YYGGAFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHK--------------------PTKVLSPEY 267 (298)
T ss_dssp CBCTTEEEEEHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSC--------------------CSEEECGGG
T ss_pred EEeeeecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhhhhhhhhhcC--------------------CCceeCHHH
Confidence 6666665444442 2 2222333323333346899999999987532 257899999
Q ss_pred ccccc
Q 016559 225 NADVG 229 (387)
Q Consensus 225 N~~~~ 229 (387)
+++.+
T Consensus 268 ~Wd~~ 272 (298)
T 3ioh_A 268 LWDQQ 272 (298)
T ss_dssp SBCHH
T ss_pred cCCcc
Confidence 98754
No 15
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=36.90 E-value=1.2e+02 Score=29.89 Aligned_cols=101 Identities=16% Similarity=0.096 Sum_probs=53.3
Q ss_pred CCCEEEEEEeeCcchHHHHHHHHHHHHHhCCCCc-E-EEEEcCCCCHHHHHHHHhcCcEEEEeeeeCCCCCCCCcchhhh
Q 016559 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKD-M-VVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGV 105 (387)
Q Consensus 28 ~~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~ns~~d-l-VvLv~d~vs~e~~~~L~~~g~~v~~I~~i~~p~~~~~~~~~~s 105 (387)
.++...|..++|..- ..+.-++.||........ . ||+++++=++++...+.+....+ .++..+. +.-..
T Consensus 65 ~p~vSVIIp~yN~~~-~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v---~vi~~~~-----n~G~~ 135 (501)
T 2ffu_A 65 LPATSVVITFHNEAR-SALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKV---RVLRNDR-----REGLM 135 (501)
T ss_dssp CCCEEEEEEESSCCH-HHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTE---EEEECSS-----CCHHH
T ss_pred CCCEEEEEEeCcCcH-HHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCCCE---EEEECCC-----CcCHH
Confidence 457888888888631 024456778887654322 2 56676654444433222222222 2232221 11112
Q ss_pred hhhhhccccccccEEEEEcCCeeecCC-chHHh
Q 016559 106 YTKLKIFNMTNYKKVVYLDADTIVIKN-IEDLF 137 (387)
Q Consensus 106 y~KL~~~~L~eydRVLYLDaD~lVl~n-LdeLF 137 (387)
-.+-.......-|-|++||+|+.+..+ |.+|.
T Consensus 136 ~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll 168 (501)
T 2ffu_A 136 RSRVRGADAAQAKVLTFLDSHCECNEHWLEPLL 168 (501)
T ss_dssp HHHHHHHHHCCSSEEEECCSSEEECTTCHHHHH
T ss_pred HHHHHHHHhcCCCEEEEECCCcccCccHHHHHH
Confidence 223333344567899999999998654 44444
No 16
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=35.09 E-value=1.3e+02 Score=29.42 Aligned_cols=109 Identities=18% Similarity=0.243 Sum_probs=70.8
Q ss_pred CCCCEEEEEEeeCcchHHHHHHHHHHHHHh-CC--CCcEEEEEcCCCCHHHHHHHHhc--C-cEEEEeee--eCCCCCCC
Q 016559 27 QSTDQAYVTLLYGDEFLLGVRVLGKSIRDT-GS--NKDMVVLVSDGVSDYSKKLLKAD--G-WIVEKISL--LENPNQVR 98 (387)
Q Consensus 27 ~~~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~-ns--~~dlVvLv~d~vs~e~~~~L~~~--g-~~v~~I~~--i~~p~~~~ 98 (387)
++.+-|+|+++-|.+ |.+++-.+.||-+. |. ++|-|+|-++..+++-++.+++. | +....|.. -.-|....
T Consensus 25 ~r~nAtfV~L~RN~e-l~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~~~~sg~v~Fg~Ip~e~W~~P~~Id 103 (348)
T 1s4n_A 25 GKPKACYVTLVRNKE-LKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGILPKEHWSYPEWIN 103 (348)
T ss_dssp SCCCEEEEEECCGGG-HHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHCSSCEEEEECCGGGSSCCTTSC
T ss_pred CCCceEEEEEeccHH-HHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHHHhcCcceEEEEcCHHHcCCCCCcC
Confidence 577889999987754 88888888888865 55 57888999999999988888874 3 22222211 11221100
Q ss_pred -------------------Cc------ch-hhhhhhhhccccccccEEEEEcCCeeecCCch-HHhc
Q 016559 99 -------------------PK------RF-WGVYTKLKIFNMTNYKKVVYLDADTIVIKNIE-DLFK 138 (387)
Q Consensus 99 -------------------~~------~~-~~sy~KL~~~~L~eydRVLYLDaD~lVl~nLd-eLF~ 138 (387)
.. || .+-|.| -..|.+||=.-=++.|+-+..||+ +.|.
T Consensus 104 ~~~a~~~~~~~~~~i~Yg~s~sYr~MCRf~SG~F~~--h~~l~~YdyYWRvEPdv~~~CDi~YDpF~ 168 (348)
T 1s4n_A 104 QTKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWR--HELLEEYDWYWRVEPDIKLYCDINYDVFK 168 (348)
T ss_dssp HHHHHHHHHHHTTTSTTTTCHHHHHHHHHHHHTGGG--SGGGTTCSEEEECCTTCEECSCCCSCHHH
T ss_pred HHHHHHHHHHHhcCCccCCCcchhhhhhhhhhhhcc--CcccccCceEEEeCCCceeecCCCCCccH
Confidence 00 01 011222 123579999999999999999986 4554
No 17
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=32.67 E-value=58 Score=29.38 Aligned_cols=115 Identities=15% Similarity=0.148 Sum_probs=60.7
Q ss_pred cccccEEEEEcCCeeecC-----CchHHhcChhhhhc------cCCC-CcccceEEEEeCCHHHHHHHHHHHHhcCCC--
Q 016559 114 MTNYKKVVYLDADTIVIK-----NIEDLFKCRKFCAN------LKHS-ERLNSGVMVVEPSAAVFNDMMTKVNTLGSY-- 179 (387)
Q Consensus 114 L~eydRVLYLDaD~lVl~-----nLdeLF~l~~~~Aa------~~~~-~yfNSGVmvinps~~~~~~ile~~~~~~~~-- 179 (387)
.++-|-+-|||+|++|.+ +++.-.++...-.. ..+. --+|+|++++..+.-..+++.=-+.-...+
T Consensus 70 hPeAEWfWWLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~~~lNtGvfL~~~~~~~irncqWSld~~~~w~~ 149 (213)
T 2p6w_A 70 FPSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGSYPINTGVKFVHKDALEIEKIVWSLRNEAPWNT 149 (213)
T ss_dssp CTTCSEEEEECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSSSSCCTTEEEEEGGGHHHHHHHHHTTTSTTTTS
T ss_pred CCCceEEEEecCCceeecCCCCCcHHHccccccCceeeccccccccccccccceeeeecccchhhhhceeehhhhhcccC
Confidence 478999999999999982 22222111110000 1122 247999999999876555553222222111
Q ss_pred CCChHHHH-HHHhcCCCCCcccCCCCCcccccCCCCCCcccccccccccccccccccccccCCCCcEEEEeeCCC
Q 016559 180 TGGDQGFL-NSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYMLANKWMVDESELHVIHYTLGP 253 (387)
Q Consensus 180 ~~~DQdiL-N~~f~d~~~~~~f~p~~~~~~~~~~p~~~~~~Lp~~YN~~~~~y~~~~~w~~~~~~~~IIHft~gp 253 (387)
--.+|... ..+|.. .|++ -+..=|..-||....|- .-.+++..||-+ |.
T Consensus 150 ~~~~~~~~~~~~~~~-------~~~~-----------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~ 199 (213)
T 2p6w_A 150 FPYEQKTVYEYVFPR-------IPGR-----------YIVHDPYTLNCIVKAYP------EHVKDALFVHMC-GT 199 (213)
T ss_dssp TTTHHHHHHHTHHHH-------STTS-----------EEEECCTTTSEETTTCT------TTGGGCSEEECT-TC
T ss_pred CCcccceeeeeeccC-------CCcc-----------eEecCcceeeeehhhch------hhhhhhhhhhhc-cC
Confidence 12466543 444543 1221 13334555666554431 124577789985 63
No 18
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=29.25 E-value=60 Score=30.16 Aligned_cols=164 Identities=12% Similarity=0.146 Sum_probs=88.2
Q ss_pred EEEEEEeeCcchHHHHHHHHHHHHHhC-CCCc--EEE-EEcCCC---CHHHHHHHHhcCcEEEEeeeeCCCCCCCCcchh
Q 016559 31 QAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKD--MVV-LVSDGV---SDYSKKLLKADGWIVEKISLLENPNQVRPKRFW 103 (387)
Q Consensus 31 ~Ayvt~~tdd~Yl~~a~VL~~SL~~~n-s~~d--lVv-Lv~d~v---s~e~~~~L~~~g~~v~~I~~i~~p~~~~~~~~~ 103 (387)
.+.++++++ .|.....-.+.|--++- +++. +.. +.+|+. +... ...+..+ . + ...+|.
T Consensus 3 IGl~vfA~G-kY~~fl~~Fl~SAek~Fm~g~~~~V~yYVFTD~~~~vp~~~-------~~~v~~~--~--~---~~~~Wq 67 (246)
T 4ayl_A 3 IGILYICTG-KYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKLYDEEN-------NKHIHRI--K--Q---KNLGWP 67 (246)
T ss_dssp EEEEEECCG-GGGGGHHHHHHHHHHHBSCSTTSEEEEEEEESCSCCTTTTT-------CTTEEEE--E--C---CCCCTT
T ss_pred EEEEEEEeC-cHHHHHHHHHHhHHHhccCCCccceEEEEEeCChhhCCcCC-------CceEEEE--e--C---CcCCCc
Confidence 455666666 47666667777877774 6777 543 456543 2211 1112111 1 1 123442
Q ss_pred -hhhhhhhccc-----c-ccccEEEEEcCCeeecCCch-HHh-cC--hhhhh-----------------------c-cC-
Q 016559 104 -GVYTKLKIFN-----M-TNYKKVVYLDADTIVIKNIE-DLF-KC--RKFCA-----------------------N-LK- 147 (387)
Q Consensus 104 -~sy~KL~~~~-----L-~eydRVLYLDaD~lVl~nLd-eLF-~l--~~~~A-----------------------a-~~- 147 (387)
.+..|+.++. + .|+|=+..+|+|+++.+++. |.+ -. +...| | ++
T Consensus 68 d~sm~Rm~~i~~~~~~~~~evDyLf~~dvd~~F~~~vG~E~L~p~~~~~lva~lHp~~y~~~~~~fpYERrp~S~AyIp~ 147 (246)
T 4ayl_A 68 DNTLKRFHIFLRIKEQLERETDYLFFFNANLLFTSPIGKEILPPSDSNGLLGTMHPGFYNKPNSEFTYERRDASTAYIPE 147 (246)
T ss_dssp HHHHTHHHHHHTTHHHHHHHCSEEEEECTTEEECSCBCGGGSCCTTSCCEEEEBCGGGC---------------------
T ss_pred ccchHHHHHHHHHHHHHHhhCCEEEEEeCCceeeccCCHHHcccCCCCCEEEEechhhhCCCcccCcccCCccccccccC
Confidence 3455555543 2 46899999999999999874 332 11 11111 1 21
Q ss_pred --CCCcccceEEEEeCCH--H----HHHHHHHHHHhcCCCCCChHHHHHHHhcCCCCCcccCCCCCcccccCCCCCCccc
Q 016559 148 --HSERLNSGVMVVEPSA--A----VFNDMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMER 219 (387)
Q Consensus 148 --~~~yfNSGVmvinps~--~----~~~~ile~~~~~~~~~~~DQdiLN~~f~d~~~~~~f~p~~~~~~~~~~p~~~~~~ 219 (387)
..-|+-+|+.-=.+.+ + -.+.+++-..+.-.-.++|..=||.+|-... | ...
T Consensus 148 ~eGdfYY~ga~fGG~~~~vl~Lt~~c~~~i~~D~~n~I~A~whDESHLNKYfl~~K-----------------P---~~v 207 (246)
T 4ayl_A 148 GEGRYYYAGGLSGGCTKAYLKLCTTICSWVDRDATNHIIPIWHDESLINKYFLDNP-----------------P---AIT 207 (246)
T ss_dssp ---CCCBCSSEEEEEHHHHHHHHHHHHHHHHHHHTTCSSCSCCHHHHHHHHHHHSC-----------------C---SEE
T ss_pred CCCCeEEeeeecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhHhHHHHHhCC-----------------C---Cee
Confidence 2346666665434442 2 2222333223333346899999999987631 1 235
Q ss_pred cccccccccc
Q 016559 220 LSTLYNADVG 229 (387)
Q Consensus 220 Lp~~YN~~~~ 229 (387)
||+.|+++.+
T Consensus 208 LSPEY~wd~~ 217 (246)
T 4ayl_A 208 LSPAYLYPEG 217 (246)
T ss_dssp ECGGGGEETT
T ss_pred eCHHHcCCcc
Confidence 8999988754
No 19
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=23.30 E-value=47 Score=33.92 Aligned_cols=92 Identities=15% Similarity=0.136 Sum_probs=50.5
Q ss_pred CCCEEEEEEeeCc-chHHHHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhc---CcEEEEeeeeCCCCCCCCcch
Q 016559 28 STDQAYVTLLYGD-EFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKAD---GWIVEKISLLENPNQVRPKRF 102 (387)
Q Consensus 28 ~~~~Ayvt~~tdd-~Yl~~a~VL~~SL~~~n-s~~dlVvLv~d~vs~e~~~~L~~~---g~~v~~I~~i~~p~~~~~~~~ 102 (387)
.++.+.++.++|. .+ +.-++.|+.... ++.. +++++++-++++.+.+++. ...++-+. .++. ..
T Consensus 374 ~~~vsiii~~yn~~~~---l~~~l~s~~~q~~~~~e-iivvdd~S~d~t~~~~~~~~~~~~~i~~~~---~~n~----G~ 442 (625)
T 2z86_A 374 VPLVSIYIPAYNCSKY---IVRCVESALNQTITDLE-VCICDDGSTDDTLRILQEHYANHPRVRFIS---QKNK----GI 442 (625)
T ss_dssp SCSEEEEEEESSCTTT---HHHHHHHHHSSSCCSEE-EEEEEESCSSSHHHHHHHHHTTCTTEEEEE---ECCC----CH
T ss_pred CCeEEEEEeCCCCHHH---HHHHHHHHHhCcCCCeE-EEEEECcCChhHHHHHHHHHhhCCcEEEEe---CCCC----CH
Confidence 4578888888885 45 445667777543 3333 4556665555566666653 22232222 1211 11
Q ss_pred hhhhhhhhccccccccEEEEEcCCeeecCC
Q 016559 103 WGVYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (387)
Q Consensus 103 ~~sy~KL~~~~L~eydRVLYLDaD~lVl~n 132 (387)
..... ...+...-|=|++||+|.++..+
T Consensus 443 ~~a~n--~g~~~a~g~~i~~ld~D~~~~~~ 470 (625)
T 2z86_A 443 GSASN--TAVRLCRGFYIGQLDSDDFLEPD 470 (625)
T ss_dssp HHHHH--HHHHHCCSSEEEECCTTCEECTT
T ss_pred HHHHH--HHHHhcCCCEEEEECCCcccChh
Confidence 11222 22233456789999999998554
No 20
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=22.42 E-value=2.1e+02 Score=27.91 Aligned_cols=105 Identities=11% Similarity=-0.050 Sum_probs=58.4
Q ss_pred CCCEEEEEEeeCcchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHh---cCcEEEEeeeeCCCCCCCCcch--
Q 016559 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKA---DGWIVEKISLLENPNQVRPKRF-- 102 (387)
Q Consensus 28 ~~~~Ayvt~~tdd~Yl~~a~VL~~SL~~~ns~~dlVvLv~d~vs~e~~~~L~~---~g~~v~~I~~i~~p~~~~~~~~-- 102 (387)
..+.||+.++.++ + ....-++..+ ..+...++|-++...+.+..+.+++ ....+. ++.......-..+
T Consensus 83 ~~kiAflil~h~d-~-~~l~rll~~l--y~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~---v~~~~~~v~WGg~S~ 155 (391)
T 2gak_A 83 GFPIAYSIVVHHK-I-EMLDRLLRAI--YMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVF---VASQLESVVYASWTR 155 (391)
T ss_dssp TSCEEEEEEECSC-H-HHHHHHHHHH--CCTTSEEEEEECTTSCHHHHHHHHHHHHTCTTEE---ECSSCCCCCTTSHHH
T ss_pred CCCEEEEEEecCC-H-HHHHHHHHHH--hCCCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEE---EeccCcccccCCchH
Confidence 4689999888764 3 4444444444 3566665565666666654444432 222222 1211111111111
Q ss_pred hhhhhhhhcccc---ccccEEEEEcCCeeecCCchHHhcC
Q 016559 103 WGVYTKLKIFNM---TNYKKVVYLDADTIVIKNIEDLFKC 139 (387)
Q Consensus 103 ~~sy~KL~~~~L---~eydRVLYLDaD~lVl~nLdeLF~l 139 (387)
..+-.++....+ .+++.++.|-+.-+.+++.++|.+.
T Consensus 156 v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~ 195 (391)
T 2gak_A 156 VKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRK 195 (391)
T ss_dssp HHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHH
Confidence 122223332222 4899999999999999999998653
Done!