BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016561
(387 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 23/294 (7%)
Query: 91 QWRKEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSY-VTKRLAPMLGNGLLR 149
+ K+YG ++ + G + + + P+++K + L K Y V P G ++
Sbjct: 42 ECHKKYGKVWGFYDGQQPVLAITDPDMIKTV-------LVKECYSVFTNRRPFGPVGFMK 94
Query: 150 S-----NGHCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNADIR 204
S W + R +++P F K+K MV I+ + L+R + EAE G +
Sbjct: 95 SAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR--EAETG--KPVT 150
Query: 205 VDEDLREVSADVISRASFG----SSNLRGKEIFAKLRSLQKAISNQSFLFGATNFAGRFL 260
+ + S DVI+ SFG S N + L + F T F +
Sbjct: 151 LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPF-LI 209
Query: 261 AMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGA-VKDQSLGKDS 319
+ + NI +E+ + + +VK ++ D +QL+++ K+ K
Sbjct: 210 PILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKAL 269
Query: 320 SKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLP 373
S +V FAG+E+T+ S+ + LA HP+ Q ++ E+ V + P
Sbjct: 270 SDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAP 323
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 23/294 (7%)
Query: 91 QWRKEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSY-VTKRLAPMLGNGLLR 149
+ K+YG ++ + G + + + P+++K + L K Y V P G ++
Sbjct: 43 ECHKKYGKVWGFYDGQQPVLAITDPDMIKTV-------LVKECYSVFTNRRPFGPVGFMK 95
Query: 150 S-----NGHCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNADIR 204
S W + R +++P F K+K MV I+ + L+R + EAE G +
Sbjct: 96 SAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR--EAETG--KPVT 151
Query: 205 VDEDLREVSADVISRASFG----SSNLRGKEIFAKLRSLQKAISNQSFLFGATNFAGRFL 260
+ + S DVI+ SFG S N + L + F T F +
Sbjct: 152 LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPF-LI 210
Query: 261 AMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGA-VKDQSLGKDS 319
+ + NI +E+ + + +VK ++ D +QL+++ K+ K
Sbjct: 211 PILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKAL 270
Query: 320 SKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLP 373
S +V FAG+E+T+ S+ + LA HP+ Q ++ E+ V + P
Sbjct: 271 SDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAP 324
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 23/294 (7%)
Query: 91 QWRKEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSY-VTKRLAPMLGNGLLR 149
+ K+YG ++ + G + + + P+++K + L K Y V P G ++
Sbjct: 41 ECHKKYGKVWGFYDGQQPVLAITDPDMIKTV-------LVKECYSVFTNRRPFGPVGFMK 93
Query: 150 S-----NGHCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNADIR 204
S W + R +++P F K+K MV I+ + L+R + EAE G +
Sbjct: 94 SAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR--EAETG--KPVT 149
Query: 205 VDEDLREVSADVISRASFG----SSNLRGKEIFAKLRSLQKAISNQSFLFGATNFAGRFL 260
+ + S DVI+ SFG S N + L + F T F +
Sbjct: 150 LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPF-LI 208
Query: 261 AMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGA-VKDQSLGKDS 319
+ + NI +E+ + + +VK ++ D +QL+++ K+ K
Sbjct: 209 PILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKAL 268
Query: 320 SKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLP 373
S +V FAG+E+T+ S+ + LA HP+ Q ++ E+ V + P
Sbjct: 269 SDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAP 322
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 120/300 (40%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GLL S H
Sbjct: 35 ELGEIFKFEAPGRVTCYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLLTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQS---------DDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHEST+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 121/302 (40%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GLL S H
Sbjct: 36 ELGEIFKFEAPGRVTCYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLLTSWTHE 94
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 95 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 147
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 204
Query: 265 H--DNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQS---------DDLLTHMLNG--KDPETGEPLDDE 253
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHEST+ S+ L L +P E +V D +P + LK
Sbjct: 254 NIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 313
Query: 383 TV 384
V
Sbjct: 314 YV 315
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 121/302 (40%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GLL S H
Sbjct: 35 ELGEIFKFEAPGRVTCYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLLTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 H--DNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQS---------DDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHEST+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 39/297 (13%)
Query: 89 FEQWRKEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLL 148
F W K+YGP+ + + + V PE VK+ S + K S + + L + G L
Sbjct: 16 FLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYN--KDSKMYRALQTVFGERLF 73
Query: 149 ------RSNGHCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD 202
N W +QR+++ F + ++ E + L+ + +EA+
Sbjct: 74 GQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLV----EILEAKADGQTP 129
Query: 203 IRVDEDLREVSADVISRASFG--SSNLRGKEIFAKLRSLQKAISNQSFLFGAT---NFAG 257
+ + + L + D++++A+FG +S L G + + L +A+ + L G T N
Sbjct: 130 VSMQDMLTYTAMDILAKAAFGMETSMLLGAQ-----KPLSQAV--KLMLEGITASRNTLA 182
Query: 258 RFLAMKKHDNIGNLEKEIESL--IWDTVKEREQQCAGAXXXXXXDLMQLIL---EGAVKD 312
+FL K+ + + + I L + +R ++ D++ IL EGA D
Sbjct: 183 KFLPGKRK-QLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDD 241
Query: 313 QSLGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG 369
+ L +DN + AGHE++A ++ +M L+ PE ++ E+ +V G
Sbjct: 242 EGL---------LDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG 289
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFD-KNLSQALKFARDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEYIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L + + N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFIISMIRALDE-VMNKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQS---------DDLLTQMLNG--KDPETGEPLDDGNI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P + E T+V D +P + LK V
Sbjct: 255 SYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKYV 314
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFD-KNLSQALKFVRDFFGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 120/300 (40%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 36 ELGEIFKFEAPGRVTRYLSSQRLIKEAADESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 94
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 95 KNWCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 147
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I + F +S R + I + +R+L +A+ N+ + A +
Sbjct: 148 RLTLDTIGLSGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 206
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 207 QEDIKVMNDLVDKIIADRKASGEQS---------DDLLTHMLNG--KDPETGEPLDDENI 255
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 315
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 41 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 99
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 100 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 152
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 153 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRTNPDDPAYDENKRQF 211
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 212 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLHG--KDPETGEPLDDENI 260
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 261 RYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 320
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 120/300 (40%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + + G+GL S H
Sbjct: 36 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQAPKFVRDLAGDGLFTSWTHE 94
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 95 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 147
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLRRANPDDPAYDENKRQF 206
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 207 QEDIKVMNDLVDKIIADRKASGEQS---------DDLLTHMLNG--KDPETGEPLDDENI 255
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 256 RYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSHKQVKQLKYV 315
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFD-KNLSQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFD-KNLSQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 36 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 94
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 95 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 147
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 204
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 253
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 254 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 313
Query: 383 TV 384
V
Sbjct: 314 YV 315
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 36 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 94
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 95 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 147
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 206
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 207 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 255
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 315
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 38 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 96
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 97 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 149
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 206
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 207 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 255
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 256 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 315
Query: 383 TV 384
V
Sbjct: 316 YV 317
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 20/277 (7%)
Query: 94 KEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGN-GLLRSNG 152
+++G + G + V PEL + + + P + + L +LG G+ +NG
Sbjct: 52 RDHGDVVRIKLGPKTVYAVTNPELTGALALNPDYHIAGPLW--ESLEGLLGKEGVATANG 109
Query: 153 HCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNADIRVDEDLREV 212
+QR+ + P F +D + IM E L +WQ + D + RV V
Sbjct: 110 PLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPG-KTVDATSESFRV---AVRV 165
Query: 213 SADVISRASFGSSNLRGKEIFAKLRSLQKAISNQSFLFGATNFAGRFLAMKKHDNIGNLE 272
+A + R + + R + + L ++ + + + + + L + + +
Sbjct: 166 AARCLLRGQY--MDERAERLCVALATVFRGMYRRMVVPLGPLYR---LPLPANRRFNDAL 220
Query: 273 KEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFIVDNCKNIY 332
++ L+ + + ER A DL+ +LE KD + G ++ I D I
Sbjct: 221 ADLHLLVDEIIAERR-----ASGQKPDDLLTALLEA--KDDN-GDPIGEQEIHDQVVAIL 272
Query: 333 FAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG 369
G E+ A W L LA HPE + IR E+ V G
Sbjct: 273 TPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG 309
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFD-KNLSQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQS---------DDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 38 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 96
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 97 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 149
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 208
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 209 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 257
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 258 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 317
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 38 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 96
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 97 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 149
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 206
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 207 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 255
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 256 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 315
Query: 383 TV 384
V
Sbjct: 316 YV 317
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 36 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 94
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 95 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 147
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 204
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 205 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 253
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 254 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 313
Query: 383 TV 384
V
Sbjct: 314 YV 315
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFD-KNLSQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFD-KNLSQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQAPKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLRRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQS---------DDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLATSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 36 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 94
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 95 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 147
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 206
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 207 QEDIKVMNDLVDKIIADRKASGEQS---------DDLLTHMLNG--KDPETGEPLDDENI 255
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 256 RYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 315
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 120/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQS---------DDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLATSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A+ N+ + A +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM-NKLQRANPDDPAYDENKRQF 205
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 206 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDENI 254
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ S+ L L +P E +V D +P + LK V
Sbjct: 255 RYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 314
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I GHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I GHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I GHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I GHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I GHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+GL S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGLFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I GHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 34/302 (11%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ L+KE D S K + G+G S H
Sbjct: 35 ELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNL-SQALKFVRDFAGDGEFTSWTHE 93
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + I+ P F +KG +MV+ L++KW+ +NAD I V ED+
Sbjct: 94 KNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWE-------RLNADEHIEVPEDMT 146
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L +A++ L A + K+
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK---LQRANPDDPAYDENKR 203
Query: 265 --HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
++I + ++ +I D EQ DL+ +L G KD G+
Sbjct: 204 QFQEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLNG--KDPETGEPLDDE 252
Query: 323 FIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLK 382
I AGHE+T+ S+ L L +P E +V D +P + LK
Sbjct: 253 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLK 312
Query: 383 TV 384
V
Sbjct: 313 YV 314
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 118/300 (39%), Gaps = 30/300 (10%)
Query: 95 EYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGLLRSNGH- 153
E G I+ + R Y++ LVKE D S K + G+GL S H
Sbjct: 36 ELGEIFKFEAPGRVTRYISSQRLVKEACDESRFDKNL-SQARKFVRDFAGDGLATSWTHE 94
Query: 154 -CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD--IRVDEDLR 210
W + R I+ P +KG +MV+ L++KW+ +N+D I V ED+
Sbjct: 95 KNWKKARNILLPRLSQQAMKGYHAMMVDIAVQLVQKWE-------RLNSDEHIEVPEDMT 147
Query: 211 EVSADVISRASFG---SSNLRGKE---IFAKLRSLQKAISNQSFLFGATNFAGRFLAMKK 264
++ D I F +S R + I + +R+L + + N+ + A +
Sbjct: 148 RLTLDTIGLCGFNYRINSFYRDQPHPFITSMVRALDE-VMNKLQRANPDDPAYDENKRQF 206
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFI 324
++I + ++ +I D EQ DL+ +L G KD G+ I
Sbjct: 207 QEDIKVMNDLVDKIIADRKASGEQ---------SDDLLTHMLHG--KDPETGEPLDDENI 255
Query: 325 VDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSLPHLKTV 384
AGHE+T+ ++ L L +P E +V D +P + LK V
Sbjct: 256 RYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYV 315
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 121/294 (41%), Gaps = 35/294 (11%)
Query: 88 YFEQWRKEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLGNGL 147
+ E ++YGP+++++ + Y+ + + S + DL ++ P+ G G+
Sbjct: 36 FLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGV 95
Query: 148 LRSNGH-CWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNADIRVD 206
+ + +Q+K++ + K V I+ + T+ W G + + V
Sbjct: 96 AYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESW--------GESGEKNVF 147
Query: 207 EDLREVSADVISRASFGSSNLRGKEIFAKLRSLQKAISNQSFLFGATNFAGRFL------ 260
E L E+ +I AS L GKEI ++L +K + L G + A L
Sbjct: 148 EALSEL---IILTAS---HCLHGKEIRSQLN--EKVAQLYADLDGGFSHAAWLLPGWLPL 199
Query: 261 -AMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDS 319
+ ++ D +EI+ + + +++R Q D++Q +L+ KD G+
Sbjct: 200 PSFRRRDRA---HREIKDIFYKAIQKRRQS-----QEKIDDILQTLLDATYKD---GRPL 248
Query: 320 SKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLP 373
+ + + AG +++ ++W LA Q E VCG++LP
Sbjct: 249 TDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP 302
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 87/230 (37%), Gaps = 45/230 (19%)
Query: 131 KPSYVTKRLAPMLGNGLLRSNGHCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQ 190
K ++ + L+ + G GLL G W + RK + F V+G M E + +W+
Sbjct: 63 KATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWR 122
Query: 191 DYVEAEDGVNADIRVDEDLREVSADVISRASFGSSNLRGKEIFAKLRSLQKAISNQSFLF 250
G D+ D ++ +S ++ RA FG + L +++
Sbjct: 123 -------GEERDL--DHEMLALSLRLLGRALFG-------------KPLSPSLAEH---- 156
Query: 251 GATNFAGRFLAMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAV 310
A+K D I + +L+ + R ++ GA E +
Sbjct: 157 ----------ALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREA--------EALI 198
Query: 311 KDQSLGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHI 360
L +R + + + AGHE+ A A +W +LL+ P+WQ +
Sbjct: 199 VHPPLSHLPRERALSEAV-TLLVAGHETVASALTWSFLLLSHRPDWQKRV 247
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 86/230 (37%), Gaps = 45/230 (19%)
Query: 131 KPSYVTKRLAPMLGNGLLRSNGHCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQ 190
K ++ + L+ + G GLL G W + RK + F V+G M E +W+
Sbjct: 63 KATFQYRALSRLTGRGLLTDWGKSWKEARKALKDPFLPKSVRGYREAMEEEAWAFFGEWR 122
Query: 191 DYVEAEDGVNADIRVDEDLREVSADVISRASFGSSNLRGKEIFAKLRSLQKAISNQSFLF 250
G D+ D ++ +S ++ RA FG + L +++
Sbjct: 123 -------GEERDL--DHEMLALSLRLLGRALFG-------------KPLSPSLAEH---- 156
Query: 251 GATNFAGRFLAMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAV 310
A+K D I + +L+ + R ++ GA E +
Sbjct: 157 ----------ALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREA--------EALI 198
Query: 311 KDQSLGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHI 360
L +R + + + AGHE+ A A +W +LL+ P+WQ +
Sbjct: 199 VHPPLSHLPRERALSEAV-TLLVAGHETVASALTWSFLLLSHRPDWQKRV 247
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 118/298 (39%), Gaps = 26/298 (8%)
Query: 89 FEQWRKEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDL-GKPSYVTKRLAPMLGNGL 147
F + +K+YGPIY+ G + + V +L KE+ D G+P T +A G+
Sbjct: 35 FFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGI 94
Query: 148 -LRSNGHCWAQQRKIVAPEF--FMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNADIR 204
+G W R++ F F D + + I+ + L D + +G + DI
Sbjct: 95 AFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLC----DMLATHNGQSIDIS 150
Query: 205 VDEDLREVSADVISRASFGSSNLRGKEIFAKLRSLQKAISNQ-------SFLFGATNFAG 257
+ +VIS F +S G +++ + I + + F
Sbjct: 151 F--PVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN 208
Query: 258 RFL-AMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLG 316
+ L +K H I N ++ + I + KE+ + + + LMQ + +
Sbjct: 209 KTLEKLKSHVKIRN---DLLNKILENYKEKFR--SDSITNMLDTLMQAKMNSDNGNAGPD 263
Query: 317 KDS---SKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDS 371
+DS S I+ +I+ AG E+T W L L +P+ + + E+ + G S
Sbjct: 264 QDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFS 321
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 324 IVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG----DSLPDADSLP 379
IV+ +I+ AG ++ A SW LM L PE Q I+ EL V G L D LP
Sbjct: 283 IVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLP 342
Query: 380 HLK 382
+L+
Sbjct: 343 YLE 345
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 38/311 (12%)
Query: 94 KEYGPIYTYSTGMRQHMYVNQPELVKE--MNQSISLDLGKPSYVTKRLAPMLGNGLLRSN 151
+ YGP++T G R+ + + + V+E ++Q+ G+ T G G++ SN
Sbjct: 41 ERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFS-GRGEQATFDWV-FKGYGVVFSN 98
Query: 152 GHCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNADIRVDEDLRE 211
G Q R+ D G GI E Q D + G N D L
Sbjct: 99 GERAKQLRRFSIATL-RDFGVGKRGIE-ERIQEEAGFLIDALRGTGGANIDPTFF--LSR 154
Query: 212 VSADVISRASFGSS-NLRGKEIFAKLRSLQKAISNQSFLFGATNFAGR----FLAMKKH- 265
++VIS FG + + KE + LR + SF F +T+ G+ F ++ KH
Sbjct: 155 TVSNVISSIVFGDRFDYKDKEFLSLLRMMLG-----SFQFTSTS-TGQLYEMFSSVMKHL 208
Query: 266 ----DNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSK 321
L + +E I V+ ++ D + L ++ Q K+ +
Sbjct: 209 PGPQQQAFQLLQGLEDFIAKKVEHNQRTL---DPNSPRDFIDSFL---IRMQEEEKNPNT 262
Query: 322 RFIVDN----CKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDS----LP 373
F + N N++FAG E+ + + +LL HPE + + E+ +V G +
Sbjct: 263 EFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFE 322
Query: 374 DADSLPHLKTV 384
D +P+++ V
Sbjct: 323 DRAKMPYMEAV 333
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 36/310 (11%)
Query: 94 KEYGPIYTYSTGMRQHMYVNQPELVKE--MNQSISLDLGKPSYVTKRLAPMLGNGLLRSN 151
+ YGP++T G R+ + + + VKE ++Q+ G+ T G G+ SN
Sbjct: 41 ERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFS-GRGEQATFDWL-FKGYGVAFSN 98
Query: 152 GHCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDY-VEAEDGVN-ADIRVDEDL 209
G Q R+ F + ++G G+ + +++ + ++A G + A+I L
Sbjct: 99 GERAKQLRR-----FSIATLRGF-GVGKRGIEERIQEEAGFLIDALRGTHGANIDPTFFL 152
Query: 210 REVSADVISRASFGSS-NLRGKEIFAKLRSLQKAISNQSFLFGATNFAGR----FLAMKK 264
++VIS FG + KE + LR + SF F AT+ G+ F ++ K
Sbjct: 153 SRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLG-----SFQFTATS-TGQLYEMFSSVMK 206
Query: 265 HDNIGNLE--KEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKR 322
H + KE++ L K+ E D + L ++ Q K+ +
Sbjct: 207 HLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL---IRMQEEEKNPNTE 263
Query: 323 FIVDN----CKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDS----LPD 374
F + N N++FAG E+ + + +LL HPE + + E+ +V G + D
Sbjct: 264 FYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED 323
Query: 375 ADSLPHLKTV 384
+P+ + V
Sbjct: 324 RAKMPYTEAV 333
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 123/318 (38%), Gaps = 43/318 (13%)
Query: 89 FEQWRKEYGPIYTYSTGMRQ----HMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPMLG 144
F + + +GP++T G ++ H Y E + + S P++ R
Sbjct: 36 FTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHR-----D 90
Query: 145 NGLLRSNGHCWAQQRKI---VAPEFFMDKVKGMVGIMVESTQPL--LRKWQDYVEAEDGV 199
G++ +NG W R+ + M K I E+ L LRK Q
Sbjct: 91 RGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQG-----QPF 145
Query: 200 NADIRVDEDLREVSADVISRASFGSSNLRGKEIFAKLRSLQKAISNQSFLFGAT------ 253
+ + V AD++ R F ++ E F +L L N++F +T
Sbjct: 146 DPTFLIGCAPCNVIADILFRKHFDYND----EKFLRLMYL----FNENFHLLSTPWLQLY 197
Query: 254 -NFAG--RFLAMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAV 310
NF +L I N+ E++ + + VKE Q D L++E
Sbjct: 198 NNFPSFLHYLPGSHRKVIKNV-AEVKEYVSERVKEHHQSLDPNCPRDLTDC--LLVEMEK 254
Query: 311 KDQSLGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGD 370
+ S + + I +++FAG E+T+ + L++L +PE + + E+ +V G
Sbjct: 255 EKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGP 314
Query: 371 S----LPDADSLPHLKTV 384
S + D +P++ V
Sbjct: 315 SRIPAIKDRQEMPYMDAV 332
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 133/316 (42%), Gaps = 35/316 (11%)
Query: 88 YFEQWRKEYGPIYTYSTGMRQHMYVNQPELVKE--MNQSISLDLGKPSYVTKRLAPMLGN 145
Y + + YG I++ G + +N ++VKE ++QS + +P +G
Sbjct: 39 YMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQS-EIFADRPCLPLFMKMTKMG- 96
Query: 146 GLLRSN-GHCWAQQRKIVAPEF--FMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD 202
GLL S G W R++ F F K ++E T + + D +E G D
Sbjct: 97 GLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEET----KFFNDAIETYKGRPFD 152
Query: 203 IR--VDEDLREVSADVI--SRASFGSSNLRGK-EIFAKLRSLQKAISNQSFLFGATNFAG 257
+ + + ++ +I R ++ ++ + E+F++ +++ A S FL+ A + G
Sbjct: 153 FKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSE--NVELAASASVFLYNAFPWIG 210
Query: 258 RFLAMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGK 317
L KH + ++++D + ++ A L Q ++ + + GK
Sbjct: 211 -ILPFGKHQQLF----RNAAVVYDFLSRLIEK---ASVNRKPQLPQHFVDAYLDEMDQGK 262
Query: 318 DS-----SKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG--- 369
+ SK ++ + + AG E+T W ++ +AL+P Q ++ E+ + G
Sbjct: 263 NDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG 322
Query: 370 -DSLPDADSLPHLKTV 384
S D +P+ + V
Sbjct: 323 KPSWDDKCKMPYTEAV 338
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 133/316 (42%), Gaps = 35/316 (11%)
Query: 88 YFEQWRKEYGPIYTYSTGMRQHMYVNQPELVKE--MNQSISLDLGKPSYVTKRLAPMLGN 145
Y + + YG I++ G + +N ++VKE ++QS + +P +G
Sbjct: 39 YMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQS-EIFADRPCLPLFMKMTKMG- 96
Query: 146 GLLRSN-GHCWAQQRKIVAPEF--FMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD 202
GLL S G W R++ F F K ++E T + + D +E G D
Sbjct: 97 GLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEET----KFFNDAIETYKGRPFD 152
Query: 203 IR--VDEDLREVSADVI--SRASFGSSNLRGK-EIFAKLRSLQKAISNQSFLFGATNFAG 257
+ + + ++ +I R ++ ++ + E+F++ +++ A S FL+ A + G
Sbjct: 153 FKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSE--NVELAASASVFLYNAFPWIG 210
Query: 258 RFLAMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGK 317
L KH + ++++D + ++ A L Q ++ + + GK
Sbjct: 211 -ILPFGKHQQLF----RNAAVVYDFLSRLIEK---ASVNRKPQLPQHFVDAYLDEMDQGK 262
Query: 318 DS-----SKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG--- 369
+ SK ++ + + AG E+T W ++ +AL+P Q ++ E+ + G
Sbjct: 263 NDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG 322
Query: 370 -DSLPDADSLPHLKTV 384
S D +P+ + V
Sbjct: 323 KPSWDDKCKMPYTEAV 338
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 123/308 (39%), Gaps = 44/308 (14%)
Query: 89 FEQWRKEYGPIYTYSTGMRQHMYVNQPELVKE--MNQSISLD-LGKPSYVTKRLAPML-G 144
F + R++YG ++T G R + + + ++E ++Q+ + GK + V P+ G
Sbjct: 36 FLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD----PIFQG 91
Query: 145 NGLLRSNGHCWAQQRKI---VAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNA 201
G++ +NG W R+ +F M K + E Q R + + G
Sbjct: 92 YGVIFANGERWRALRRFSLATMRDFGMGKRS-----VEERIQEEARCLVEELRKSKGALL 146
Query: 202 DIRVDEDLREVSADVISRASFGSSNLRGKEIFAKLRSLQKAISN-------QSF-LFGA- 252
D + +++++I FG +F +L L + Q F LF
Sbjct: 147 DNTLL--FHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGF 204
Query: 253 -TNFAGRFLAMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVK 311
+F G H I +EI + I +V E+ A D + + L K
Sbjct: 205 LKHFPG------THRQIYRNLQEINTFIGQSV---EKHRATLDPSNPRDFIDVYLLRMEK 255
Query: 312 DQSLGKDSSKRF----IVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKV 367
D+S D S F ++ +++FAG E+T+ + +L+ +P ++ E+ +V
Sbjct: 256 DKS---DPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQV 312
Query: 368 CGDSLPDA 375
G P A
Sbjct: 313 IGSHRPPA 320
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRF- 323
H I +EI + I +V E+ A D + + L KD+S D S F
Sbjct: 212 HRQIYRNLQEINTFIGQSV---EKHRATLDPSNPRDFIDVYLLRMEKDKS---DPSSEFH 265
Query: 324 ---IVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDA 375
++ +++FAG E+T+ + +L+ +P ++ E+ +V G P A
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRF- 323
H I +EI + I +V E+ A D + + L KD+S D S F
Sbjct: 212 HRQIYRNLQEINTFIGQSV---EKHRATLDPSNPRDFIDVYLLRMEKDKS---DPSSEFH 265
Query: 324 ---IVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDA 375
++ +++FAG E+T+ + +L+ +P ++ E+ +V G P A
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 265 HDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRF- 323
H I +EI + I +V E+ A D + + L KD+S D S F
Sbjct: 212 HRQIYRNLQEINTFIGQSV---EKHRATLDPSNPRDFIDVYLLRMEKDKS---DPSSEFH 265
Query: 324 ---IVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDA 375
++ +++FAG E+T+ + +L+ +P ++ E+ +V G P A
Sbjct: 266 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 131/314 (41%), Gaps = 34/314 (10%)
Query: 89 FEQWRKEYGPIYTYSTGMRQHMYVNQPELVKE--MNQSISLD-LGKPSYVTKRLAPMLGN 145
F ++R++YG ++T G R + + E ++E ++++ + GK + V G
Sbjct: 36 FLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFR---GY 92
Query: 146 GLLRSNGHCWAQQRKIVAP---EFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNAD 202
G++ +NG+ W R+ +F M K + + + E Q L+ E A
Sbjct: 93 GVIFANGNRWKVLRRFSVTTMRDFGMGK-RSVEERIQEEAQCLIE------ELRKSKGAL 145
Query: 203 IRVDEDLREVSADVISRASFGSS-NLRGKEIFAKLRSLQKAISNQSFLFGA-----TNFA 256
+ + ++A++I FG + + +E L + S S +FG + F
Sbjct: 146 MDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFL 205
Query: 257 GRFLAMKKHDNIGNLEKEIESLIWDTV-KEREQQCAGAXXXXXXDLMQLILEGAVKDQS- 314
F H + +EI + I +V K RE A DL+ L K++S
Sbjct: 206 KHFPG--AHRQVYKNLQEINAYIGHSVEKHRETLDPSAPR----DLIDTYLLHMEKEKSN 259
Query: 315 LGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLP- 373
+ S + + N +++FAG E+T+ + +L+ +P + E+ +V G P
Sbjct: 260 AHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPP 319
Query: 374 ---DADSLPHLKTV 384
D +P+ + V
Sbjct: 320 ELHDRAKMPYTEAV 333
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 330 NIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG-DSLPDADSLPHLKTV 384
+I+ A ++ + A W L+L +P+ Q ++ EL +V G D LP P+L V
Sbjct: 286 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYV 341
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 267 NIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQSLGKDSSKRFIVD 326
+ L++ + +W +++R Q DL IL V + D ++R
Sbjct: 178 TVEQLKQAADDYLWPFIEKRMAQPG-------DDLFSRILSEPVGGRPWTVDEARRM--- 227
Query: 327 NCKNIYFAGHESTAVAASWCLMLLALHPEWQNHI--RTELTKVCGDSL 372
C+N+ F G ++ A + LA HPE Q + R +L D L
Sbjct: 228 -CRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADEL 274
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 318 DSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG 369
D + R +V +++ AG +T+ +W L+L+ LHP+ Q ++ E+ V G
Sbjct: 270 DENLRIVV---ADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIG 318
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 318 DSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG 369
D + R +V +++ AG +T+ +W L+L+ LHP+ Q ++ E+ V G
Sbjct: 270 DENLRIVV---ADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIG 318
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 324 IVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDS----LPDADSLP 379
+V N++ G E+ + + +LL HPE + + E+ +V G + D +P
Sbjct: 269 LVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMP 328
Query: 380 HLKTV 384
+++ V
Sbjct: 329 YMEAV 333
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 300 DLMQLILEGAVKDQSLGKDSSKRFIVDNCKNIY----FAGHESTAVAASWCLMLLALHPE 355
D++ +++ AVK ++ + RF D ++ FAGH +++ ASW L+ L H +
Sbjct: 224 DMLDVLI--AVKAET----GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 356 WQNHIRTELTKVCGD 370
+ EL ++ GD
Sbjct: 278 AYAAVIDELDELYGD 292
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 300 DLMQLILEGAVKDQSLGKDSSKRFIVDNCKNIY----FAGHESTAVAASWCLMLLALHPE 355
D++ +++ AVK ++ + RF D ++ FAGH +++ ASW L+ L H +
Sbjct: 224 DMLDVLI--AVKAET----GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 356 WQNHIRTELTKVCGD 370
+ EL ++ GD
Sbjct: 278 AYAAVIDELDELYGD 292
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 300 DLMQLILEGAVKDQSLGKDSSKRFIVDNCKNIY----FAGHESTAVAASWCLMLLALHPE 355
D++ +++ AVK ++ + RF D ++ FAGH +++ ASW L+ L H +
Sbjct: 224 DMLDVLI--AVKAET----GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 356 WQNHIRTELTKVCGD 370
+ EL ++ GD
Sbjct: 278 AYAAVIDELDELYGD 292
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 300 DLMQLILEGAVKDQSLGKDSSKRFIVDNCKNIY----FAGHESTAVAASWCLMLLALHPE 355
D++ +++ AVK ++ + RF D ++ FAGH +++ ASW L+ L H +
Sbjct: 224 DMLDVLI--AVKAET----GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 356 WQNHIRTELTKVCGD 370
+ EL ++ GD
Sbjct: 278 AYAAVIDELDELYGD 292
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 330 NIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG 369
+++ G E+TA SW + L HPE Q ++ EL + G
Sbjct: 286 DLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELG 325
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 310 VKDQSLGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG 369
V DQ + + ++ + AGHE+TA S ++ L HPE +R + + V G
Sbjct: 220 VADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 310 VKDQSLGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG 369
V DQ + + ++ + AGHE+TA S ++ L HPE +R + + V G
Sbjct: 220 VADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 89 FEQWRKEYGPIYTYSTGMRQHMYVNQPELVKE--MNQSISLDLGKPSYVTKRLAPMLGNG 146
F + K YGP++T GM + + E VKE ++ S +++R+ G G
Sbjct: 36 FTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITK--GLG 93
Query: 147 LLRSNGHCWAQQRKI 161
++ SNG W + R+
Sbjct: 94 IISSNGKRWKEIRRF 108
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 91 QWRKEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPML-----GN 145
++ + YGP++T GM+ + ++ E VKE +DLG+ + + P+L G
Sbjct: 38 KFSECYGPVFTVYLGMKPTVVLHGYEAVKEA----LVDLGE-EFAGRGSVPILEKVSKGL 92
Query: 146 GLLRSNGHCWAQQRKI 161
G+ SN W + R+
Sbjct: 93 GIAFSNAKTWKEMRRF 108
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 310 VKDQSLGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG 369
V DQ + + ++ + AGHE+TA S ++ L HPE +R + + V G
Sbjct: 220 VADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 310 VKDQSLGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCG 369
V DQ + + ++ + AGHE+TA S ++ L HPE +R + + V G
Sbjct: 220 VADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|3ZXS|A Chain A, Cryptochrome B From Rhodobacter Sphaeroides
pdb|3ZXS|B Chain B, Cryptochrome B From Rhodobacter Sphaeroides
pdb|3ZXS|C Chain C, Cryptochrome B From Rhodobacter Sphaeroides
Length = 522
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Query: 155 WAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVNADIRVDEDLREVSA 214
W + RK + E+F +++ G+++E +P KW E D+ LR
Sbjct: 152 WTEGRKQLRMEWFYREMRRRTGLLMEGDEPAGGKWNFDTENRKPAAPDLLRPRPLR-FEP 210
Query: 215 DVISRASFGSSNLRGKEIFAKLRSLQKAISNQSFLFGATNF 255
D RA R F +LR A L +F
Sbjct: 211 DAEVRAVLDLVEARFPRHFGRLRPFHWATDRAEALRALDHF 251
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 94 KEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPML-----GNGLL 148
K YGP++T G++ + ++ E VKE +DLG+ + + + P+ G G++
Sbjct: 42 KVYGPVFTLYFGLKPIVVLHGYEAVKEA----LIDLGE-EFSGRGIFPLAERANRGFGIV 96
Query: 149 RSNGHCWAQQRKI 161
SNG W + R+
Sbjct: 97 FSNGKKWKEIRRF 109
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 94 KEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPML-----GNGLL 148
K YGP++T G++ + ++ E VKE +DLG+ + + + P+ G G++
Sbjct: 40 KVYGPVFTLYFGLKPIVVLHGYEAVKEA----LIDLGE-EFSGRGIFPLAERANRGFGIV 94
Query: 149 RSNGHCWAQQRKI 161
SNG W + R+
Sbjct: 95 FSNGKKWKEIRRF 107
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 43/235 (18%)
Query: 142 MLG-NGLLRSNGHCWAQQRKIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAEDGVN 200
+LG N L G +RKI+ F + + M Q L +W G
Sbjct: 87 LLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQW--------GKA 138
Query: 201 ADIRVDEDLREVSADVISRASFGSSNLRGKEIFA-------KLRSLQKAISNQSFLFGAT 253
++ LR ++ DV + G + ++F L SL + N LFG +
Sbjct: 139 NEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYIQGLFSLPIPLPNT--LFGKS 196
Query: 254 NFAGRFLAMKKHDNIGNLEKEIESLIWDTVKEREQQCAGAXXXXXXDLMQLILEGAVKDQ 313
A L + LEK +K R+QQ D + ++L A +D
Sbjct: 197 QRARALL-------LAELEK--------IIKARQQQPPSEE-----DALGILL--AARDD 234
Query: 314 SLGKDSSKRFIVDNCKNIYFAGHES-TAVAASWCLMLLALHPEWQNHIRTELTKV 367
+ + S + D + FAGHE+ T+ +S+CL LL H + + +R E K+
Sbjct: 235 N-NQPLSLPELKDQILLLLFAGHETLTSALSSFCL-LLGQHSDIRERVRQEQNKL 287
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 94 KEYGPIYTYSTGMRQHMYVNQPELVKEMNQSISLDLGKPSYVTKRLAPML-----GNGLL 148
K YGP++T G+ + + ++ E+VKE +DLG+ + + P+ G G++
Sbjct: 42 KIYGPVFTLYFGLERMVVLHGYEVVKEA----LIDLGE-EFSGRGHFPLAERANRGFGIV 96
Query: 149 RSNGHCWAQQRKI 161
SNG W + R+
Sbjct: 97 FSNGKRWKEIRRF 109
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 300 DLMQLILEGAVKDQSLGKDSSKRFIVDNCKNIYFAGHESTAVAASWCLMLLALHPE 355
D++ ++L+G KD+ ++++ C + AGHE+T S ++ L HPE
Sbjct: 205 DMISMLLKGREKDKLTEEEAA-----STCILLAIAGHETTVNLISNSVLCLLQHPE 255
>pdb|2ZPA|A Chain A, Crystal Structure Of Trna(Met) Cytidine Acetyltransferase
pdb|2ZPA|B Chain B, Crystal Structure Of Trna(Met) Cytidine Acetyltransferase
Length = 671
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 13/46 (28%)
Query: 333 FAGHESTAVAASWCLMLLALHPEWQNHIRTELTKVCGDSLPDADSL 378
FA T A SW ++LL + EW+N PDADSL
Sbjct: 89 FAALSGTLKAGSWLVLLLPVWEEWENQ-------------PDADSL 121
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 13/146 (8%)
Query: 86 FPYFEQWRKEYGPIYTYSTGMRQHMYVNQPELVKEMNQ---SISLDLGKPSYVTKRLAPM 142
F + E ++K YGPIY G + +Y+ PE V + + S P ++
Sbjct: 38 FRHIENFQK-YGPIYREKLGNLESVYIIHPEDVAHLFKFEGSYPERYDIPPWLAYHRYYQ 96
Query: 143 LGNGLLRSNGHCWAQQR-----KIVAPEFFMDKVKGMVGIMVESTQPLLRKWQDYVEAED 197
G+L W + R +++APE +K + ++ +Q + ++ +
Sbjct: 97 KPIGVLFKKSGTWKKDRVVLNTEVMAPE----AIKNFIPLLNPVSQDFVSLLHKRIKQQG 152
Query: 198 GVNADIRVDEDLREVSADVISRASFG 223
+ EDL + + I+ FG
Sbjct: 153 SGKFVGDIKEDLFHFAFESITNVMFG 178
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,885,957
Number of Sequences: 62578
Number of extensions: 424516
Number of successful extensions: 1036
Number of sequences better than 100.0: 89
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 892
Number of HSP's gapped (non-prelim): 101
length of query: 387
length of database: 14,973,337
effective HSP length: 101
effective length of query: 286
effective length of database: 8,652,959
effective search space: 2474746274
effective search space used: 2474746274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)