Query 016562
Match_columns 387
No_of_seqs 127 out of 1323
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 07:58:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016562.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016562hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02332 membrane bound O-acyl 100.0 1.3E-88 2.8E-93 681.3 36.0 382 3-385 2-388 (465)
2 KOG2704 Predicted membrane pro 100.0 6.6E-81 1.4E-85 593.8 27.9 373 4-385 7-392 (480)
3 COG5202 Predicted membrane pro 100.0 2.2E-71 4.8E-76 510.2 24.9 376 4-385 7-396 (512)
4 KOG2705 Predicted membrane pro 100.0 1.1E-60 2.3E-65 437.3 15.3 369 3-380 1-375 (471)
5 KOG2706 Predicted membrane pro 100.0 1.2E-44 2.5E-49 328.2 6.9 358 15-383 1-396 (476)
6 KOG4312 Predicted acyltransfer 100.0 5E-40 1.1E-44 300.8 22.6 324 18-384 31-358 (449)
7 PF03062 MBOAT: MBOAT, membran 100.0 1.3E-40 2.8E-45 321.7 12.1 254 117-383 14-287 (322)
8 COG1696 DltB Predicted membran 100.0 8.4E-30 1.8E-34 248.4 14.0 317 23-379 8-346 (425)
9 KOG3860 Acyltransferase requir 99.9 4.7E-21 1E-25 187.0 21.8 309 41-380 87-402 (494)
10 KOG0380 Sterol O-acyltransfera 99.1 3.6E-09 7.8E-14 105.8 15.9 77 304-381 394-480 (523)
11 PLN02401 diacylglycerol o-acyl 99.0 4.4E-09 9.5E-14 103.3 14.3 54 304-358 323-376 (446)
12 PLN03242 diacylglycerol o-acyl 99.0 2.1E-09 4.5E-14 104.8 9.0 54 304-358 298-351 (410)
13 COG5056 ARE1 Acyl-CoA choleste 98.6 2E-05 4.2E-10 76.2 21.7 75 305-379 399-483 (512)
14 PF13813 MBOAT_2: Membrane bou 95.4 0.0073 1.6E-07 46.3 1.2 56 303-358 8-66 (83)
15 KOG4527 Cytochrome c oxidase, 41.4 16 0.00035 26.7 1.4 48 310-357 16-64 (76)
16 PF00376 MerR: MerR family reg 32.0 44 0.00096 21.2 2.2 19 6-24 2-20 (38)
17 PF09094 DUF1925: Domain of un 31.6 31 0.00068 26.1 1.6 22 350-371 49-70 (80)
18 PRK13749 transcriptional regul 26.2 53 0.0011 27.0 2.2 25 1-25 1-25 (121)
19 PF00046 Homeobox: Homeobox do 23.2 75 0.0016 21.6 2.3 19 4-22 28-46 (57)
20 PF07256 DUF1435: Protein of u 23.0 3.3E+02 0.0072 20.5 7.0 46 7-56 19-64 (78)
21 COG1108 ZnuB ABC-type Mn2+/Zn2 21.9 4.8E+02 0.01 24.6 8.1 32 7-38 164-195 (274)
22 PF06971 Put_DNA-bind_N: Putat 21.0 75 0.0016 21.7 1.8 15 7-21 32-46 (50)
23 PF12085 DUF3562: Protein of u 20.7 92 0.002 22.6 2.3 22 4-25 8-29 (66)
No 1
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=100.00 E-value=1.3e-88 Score=681.34 Aligned_cols=382 Identities=77% Similarity=1.363 Sum_probs=356.8
Q ss_pred hhhHHHHHhhhCCChhHHHHHHHHHHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHh
Q 016562 3 LLEMESMAGSIGVSVAVLRFLLCYVATIPVSFLWRFVPSRTGKHVYAAASGALLSYLSFGFSSNLHFLVPMLLGYLSMAI 82 (387)
Q Consensus 3 ~~~~~~~~~~~g~~~d~~~~l~~ll~~~p~~~i~r~l~~~~~r~~~~~~~G~~~~~~~~g~~~~~~~l~~~l~~Y~i~~~ 82 (387)
|..++++|+.+|+|+||+|+++|+++|+|+|.++|++++++.||++.+++|++++++++|.+..+|++++++++|+++.+
T Consensus 2 ~~~~~~ls~~~g~~~d~~~~~~~ll~s~pl~~~~r~~~~~~~r~~~~~~~Gl~~~~~~fG~~~~~~~l~~~~~~y~i~~~ 81 (465)
T PLN02332 2 RAVMESLASAIGVSVPVLRFLLCFVASIPLSALWRFIPSGTLRHLYAALSGAFLSYLSFGFSSNLHFVVPMIAGYLAMAL 81 (465)
T ss_pred cchHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999999999999999999999999999988657888898999998866
Q ss_pred cccccchHHHHHHHHHHHHHHhhhhcCCCccCccccchhHHHHHHHHHHhhhhccccCCcchhhhhHHHhhcccccCCCH
Q 016562 83 YRAKCGIITFFLGFGYLIGCHVYYMSGDAWKEGGIDATGALMVLTLKVISCAINYNDGLVTEENLREAQKKNRLTRLPSL 162 (387)
Q Consensus 83 ~~~~~~~~~~~~~l~~L~~~~~~~~~~~~w~~~~~d~t~~~mv~tlk~is~a~d~~dg~~~~~~~~~~~~~~~i~~~psl 162 (387)
.++++++++++++|+||+++|++++.+++|.++.+|+||+||++|+|++|+|+|++||+.++|+++++||++++++.||+
T Consensus 82 ~~~~~~~~~f~~~m~yL~~~h~~~~~~~~~~~~~~d~Tg~qMVLtlKl~slAfd~~DG~~~~~~l~~~qk~~ai~~~Psl 161 (465)
T PLN02332 82 ARRRCGAITFLFAFAYLIYCHVFYMSGDAWKEGGIDFTGALMVLTLKVISCAMNYQDGLLKEEGLREAQKKNRLIQLPSL 161 (465)
T ss_pred hccccchhhHHHHHHHHHHHHHHHHHccccCCCCcCccHHHHHHHHHHHHhhhhhhcccCChhhcChHHHHHHhhcCCCH
Confidence 55678999999999999999999988776666669999999999999999999999999888999999999999999999
Q ss_pred HHHHHHhhccCccccccccchhHHHHHHhhCCCC----CCCCCCcHHHHHHHHHHHHHHHHHHHHhcccccccccCchhh
Q 016562 163 IEYIGYCLCCGSHFAGPVYEMKDYLEWTERKGIW----SEPWPSPYAATLRAILQAGVCMALYLYLVPQYPLTRFTEPIY 238 (387)
Q Consensus 163 l~yl~Y~~~fp~~l~GP~~~y~~y~~~i~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~~~~~~~~~~~~f 238 (387)
+||+||+||||++++||.++|+||+|+++++... ++++|++.++++++++.|++++++++++++++|.+++.+|+|
T Consensus 162 Leyl~Y~f~f~~~l~GP~~~y~~Y~~~i~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~~~~~~~~~p~~~~~~~~f 241 (465)
T PLN02332 162 IEYLGYCLCCGSHLAGPVFEFRDYLDWTEGKGLWDPNAKGKCPSPYGATLRALLQAAICMGLYLYLTPQFPLSRFTEPDY 241 (465)
T ss_pred HHHhHHhhcccccccCCcccHHHHHHHHcCcccccccccCCCCCchHHHHHHHHHHHHHHHHHHHhcCcccHHHcCCHhh
Confidence 9999999999999999999999999999987432 245778888999999999999999999999999999999999
Q ss_pred hhhcHHHHHHHHHHHHHhhcchhhhhHhhhhhhHHhhCCCcccCCCCC-CCCCCCCcccccccceeeecccccccccccc
Q 016562 239 QEWGFWKRLSYQYMAGFTARWKYYFIWSISEASIIICGLGFSGWTESS-PPKPKWDRAKNVDILGVEFAKSAVQIPLVWN 317 (387)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~kyy~~w~l~e~~~~~~G~g~~g~~d~~-~g~~~~~~~~n~~~~~~e~~~s~~~~~~~Wn 317 (387)
.+.|+++|+.++++.+..+|+|||++|.++|++|+++|+||+|+ |++ +++++||+++|+|++++|+++|++|+|++||
T Consensus 242 ~~~~~~~r~~~~~~~~~~~R~kYY~~W~lsE~~~i~~G~gy~g~-~~~g~~~~~w~~~~Ni~~~~~E~~~s~~~~~~~WN 320 (465)
T PLN02332 242 QEWGFWHRFGYQYMSGFTARWKYYFIWSISEAAIIISGLGFSGW-DGEGKPKAKWDRAKNVDILGVELAKSAVQIPLVWN 320 (465)
T ss_pred hhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcCCC-CCCCCCcCCcCceeecceeeEEccCCHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999 544 2346899999999999999999999999999
Q ss_pred hhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 016562 318 IQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRDGSKLCLQK 385 (387)
Q Consensus 318 i~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalWHG~~~gyy~~F~~~~~~~~~~~~~r~~~~~~ 385 (387)
|++|+|||||||+|++++|+++++.++++||++||+|||++||||++|+++|+++.+||.+||..|+.
T Consensus 321 i~~~~Wl~~YvY~rl~~~~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl~~~l~~~~er~~~r~~~~~ 388 (465)
T PLN02332 321 IQVSTWLRHYVYERLVPKGKKPGFFQLLATQTVSAVWHGLYPGYILFFVQSALMIAGSRVIYRWQQAI 388 (465)
T ss_pred chHHHHHHHhEEeeCccCCcchhHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999998888888899999999999999999999999999999999999998887753
No 2
>KOG2704 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=6.6e-81 Score=593.83 Aligned_cols=373 Identities=44% Similarity=0.813 Sum_probs=345.0
Q ss_pred hhHHHHHhhhCCChhHHHHHHHHHHHHHHHHHhh--cCC-CcchhHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHH
Q 016562 4 LEMESMAGSIGVSVAVLRFLLCYVATIPVSFLWR--FVP-SRTGKHVYAAASGALLSYLSFGF-SSNLHFLVPMLLGYLS 79 (387)
Q Consensus 4 ~~~~~~~~~~g~~~d~~~~l~~ll~~~p~~~i~r--~l~-~~~~r~~~~~~~G~~~~~~~~g~-~~~~~~l~~~l~~Y~i 79 (387)
..++++|+.+|+++|++|+++|+++++|++.++| ..+ ++..||.+.+..|+++.|.|+|. .. +|+++...++|++
T Consensus 7 ~~l~~~a~~igv~~d~l~fl~c~l~s~~ls~~fr~~~~~~~r~~r~~~~~sig~~~~y~~~g~~~~-lhl~~~~~~~Y~~ 85 (480)
T KOG2704|consen 7 IDLTSIAPSIGVSVDQLNFLLCLLASFPLSYIFRCRFCPSSRTLRHIVTASIGLFLLYFCFGLLGI-LHLLINMFGSYLI 85 (480)
T ss_pred hhHHHhHhhcCCCHHHHHHHHHHHHHhhhhHhheeeecccchhhhhhhhhhhHHHHHHHHHhhhhh-Hhhhhhhhhhhhh
Confidence 5689999999999999999999999999999998 344 47889999999999999999998 55 9999999999999
Q ss_pred H-HhcccccchHHHHHHHHHHHHHHhhh-hcCCCccCccccchhHHHHHHHHHHhhhhccccCCcch-hhhhHHHhhccc
Q 016562 80 M-AIYRAKCGIITFFLGFGYLIGCHVYY-MSGDAWKEGGIDATGALMVLTLKVISCAINYNDGLVTE-ENLREAQKKNRL 156 (387)
Q Consensus 80 ~-~~~~~~~~~~~~~~~l~~L~~~~~~~-~~~~~w~~~~~d~t~~~mv~tlk~is~a~d~~dg~~~~-~~~~~~~~~~~i 156 (387)
+ ..++++.|+++|.+.|+||..+|+++ ++.+.|. +|+||++|++++|++++|++++||..++ |++++.||++++
T Consensus 86 m~~~~p~~v~~ivF~~~m~yl~~~Hi~r~~~~~~~~---lDiTgs~MV~v~Kit~la~~~~DG~~~~~~~L~s~QK~~al 162 (480)
T KOG2704|consen 86 MAFYRPKHVHKIVFLFAMGYLFLVHIYRWMYLETYT---LDITGSLMVLVLKITSLAISIYDGMLKEEKALTSAQKRRAL 162 (480)
T ss_pred hhcccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc---cccchHHHHHHHHHHHHHHhhhcccccChhhcchhhhhhHH
Confidence 9 56778899999999999999999996 4567787 9999999999999999999999999975 889999999999
Q ss_pred ccCCCHHHHHHHhhccCccccccccchhHHHHHHhhCCCCC-----CCCCCcHHHHHHHHHHHHHHHHHHHHhcc-cccc
Q 016562 157 TRLPSLIEYIGYCLCCGSHFAGPVYEMKDYLEWTERKGIWS-----EPWPSPYAATLRAILQAGVCMALYLYLVP-QYPL 230 (387)
Q Consensus 157 ~~~psll~yl~Y~~~fp~~l~GP~~~y~~y~~~i~~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~l~~~~~~-~~~~ 230 (387)
.++||++||+||+++|+++++||..+|+||++++++++..+ +..|++..+.+++...++++++++..+.+ ..|.
T Consensus 163 ~~mPslLeflsY~f~f~s~l~GP~~~y~dYi~fle~k~~~~~~~e~~~~Ps~~~a~~rk~~~~~i~~~lfl~l~~~~~~~ 242 (480)
T KOG2704|consen 163 REMPSLLEFLSYMFNFQSVLTGPVNDYKDYIEFLEGKMLPPTPTERRKEPSPYTAAIRKVFQALICLALFLTLVKSLPPL 242 (480)
T ss_pred HhCcHHHHHHHHHHhccceecccchhHHHHHHHhccccCCCCchhhcCCCCCCcchHHHHHHHHHHHHHHHHHccccccc
Confidence 99999999999999999999999999999999999887643 34788888899999999999999998888 4555
Q ss_pred cccCchhhhhhcHHHHHHHHHHHHHhhcchhhhhHhhhhhhHHhhCCCcccCCCCCCCCCCCCcccccccceeeeccccc
Q 016562 231 TRFTEPIYQEWGFWKRLSYQYMAGFTARWKYYFIWSISEASIIICGLGFSGWTESSPPKPKWDRAKNVDILGVEFAKSAV 310 (387)
Q Consensus 231 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~kyy~~w~l~e~~~~~~G~g~~g~~d~~~g~~~~~~~~n~~~~~~e~~~s~~ 310 (387)
....+|.+++.++..|++|.++++...|+||||+|.+||++|+++|+||+|+ |++ |.++||++.|+|++++|+++|++
T Consensus 243 ~~~~~~~~~~~~~l~k~~Y~~~~~f~~R~KYYfAW~~Sdaicn~sGfGf~G~-dd~-~~~kWdr~~Nvd~l~vE~A~s~k 320 (480)
T KOG2704|consen 243 YLLDEPFYAEYSFLLKFGYLYIAGFVARFKYYFAWTLSDAICNLSGFGFNGY-DDE-GNAKWDRVSNVDILKVELATSVK 320 (480)
T ss_pred ccccCcchhhhHHHHHHHHHHHHHHHHhhHHHhHhhhhcchhhhccccccCC-Ccc-cccchhhhcccceeeehHhhhHH
Confidence 5566677889999999999999999999999999999999999999999999 544 66999999999999999999999
Q ss_pred ccccccchhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 016562 311 QIPLVWNIQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRDGSKLCLQK 385 (387)
Q Consensus 311 ~~~~~Wni~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalWHG~~~gyy~~F~~~~~~~~~~~~~r~~~~~~ 385 (387)
|+.++|||+|+.|||+|||+|+.++|+ +.+++.||++||+|||++||||++|++.++++.++|..||..|+.
T Consensus 321 ~~l~~WNi~T~~WLR~~vYeRv~k~gk---F~~tlaT~~~SAvWHG~~pGYyltF~t~al~~~~ak~~rR~~r~~ 392 (480)
T KOG2704|consen 321 EMLDNWNIQTNKWLRRVVYERVEKKGK---FYRTLATFTTSAVWHGLYPGYYLTFLTSALFTTAAKTGRRNFRHR 392 (480)
T ss_pred HHHhhcCccHHHHHHhheEEEcCCCCc---hhhhHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 999999999999999999999987776 789999999999999999999999999999999999999999875
No 3
>COG5202 Predicted membrane protein [Function unknown]
Probab=100.00 E-value=2.2e-71 Score=510.21 Aligned_cols=376 Identities=27% Similarity=0.463 Sum_probs=336.3
Q ss_pred hhHHHHHhhhCCChhHHHHHHHHHHHHHHHHHhhcCCC-cchhHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHH
Q 016562 4 LEMESMAGSIGVSVAVLRFLLCYVATIPVSFLWRFVPS-RTGKHVYAAASGALLSYLSFGFSS----NLHFLVPMLLGYL 78 (387)
Q Consensus 4 ~~~~~~~~~~g~~~d~~~~l~~ll~~~p~~~i~r~l~~-~~~r~~~~~~~G~~~~~~~~g~~~----~~~~l~~~l~~Y~ 78 (387)
.+++.+....|+..||+|++.|++.++|+.-+.++.|+ +..++.+++..|++ +.+|..- ...+...++.+|+
T Consensus 7 ~~~~~i~~~~gv~~~~lr~l~clL~t~pf~~ilkR~p~~~~~~nlfsisl~lf---ylfgv~hl~~g~~iL~~~slfTyl 83 (512)
T COG5202 7 AVLTMIKKLSGVNYLELRFLACLLLTLPFVSILKRNPTRIRTHNLFSISLILF---YLFGVRHLVSGAYILASISLFTYL 83 (512)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhhhHHHHHhhCccccchhhHHHHHHHHH---HHHhhHhhhhhHHHHHHHHHHHHH
Confidence 35778889999999999999999999999999999886 45788888888875 4455443 1444555778899
Q ss_pred HHHh-cccccchHHHHHHHHHHHHHHhhhhcCCCccCccccchhHHHHHHHHHHhhhhccccCCcchhhhhHHHhhcccc
Q 016562 79 SMAI-YRAKCGIITFFLGFGYLIGCHVYYMSGDAWKEGGIDATGALMVLTLKVISCAINYNDGLVTEENLREAQKKNRLT 157 (387)
Q Consensus 79 i~~~-~~~~~~~~~~~~~l~~L~~~~~~~~~~~~w~~~~~d~t~~~mv~tlk~is~a~d~~dg~~~~~~~~~~~~~~~i~ 157 (387)
+... ..+.++++.+++.+++...+|..+...+.-. ...|+|+.||+++||++|||+.+|||+..+.+++++||.+++.
T Consensus 84 ~~~fyrS~~Mp~v~fivilgh~~i~h~~q~~~e~~~-ts~DIt~sqMvl~mKltsfaws~YdG~~~ssdlt~~qk~ra~r 162 (512)
T COG5202 84 LRYFYRSAYMPTVLFIVILGHYKIFHAAQLFEERIS-TSFDITGSQMVLTMKLTSFAWSYYDGKEYSSDLTEHQKSRARR 162 (512)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhhcc-CcccchHHHHHHHHHHHHhHHHhhcCCCccchhhhhhhhhhhc
Confidence 9854 4457899999999999999999765544322 2379999999999999999999999999888999999999999
Q ss_pred cCCCHHHHHHHhhccCccccccccchhHHHHHHhhCCCC--------CCCCCCcHHHHHHHHHHHHHHHHHHHHhccccc
Q 016562 158 RLPSLIEYIGYCLCCGSHFAGPVYEMKDYLEWTERKGIW--------SEPWPSPYAATLRAILQAGVCMALYLYLVPQYP 229 (387)
Q Consensus 158 ~~psll~yl~Y~~~fp~~l~GP~~~y~~y~~~i~~~~~~--------~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~~~~ 229 (387)
..|+++++++|+||+|+++.||.++|.||..++..++++ +.+.|.+.+.++.++.+|+++++++......+|
T Consensus 163 ~~p~vl~fL~YifF~p~Ll~GPafdy~dfd~~lt~~mFr~l~e~pyEr~~~P~n~k~al~~~~~gL~wlILf~~g~~~~P 242 (512)
T COG5202 163 GTPTVLDFLSYIFFIPGLLLGPAFDYADFDSWLTCEMFRSLMENPYERPKRPPNGKLALATFLKGLGWLILFQVGRISIP 242 (512)
T ss_pred CCCcHHHHHHHHHHhhhhhcCCCcccchhhhhhhHHHHhhhhcCcccccCCCCCcccHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999999999988743322 223566778899999999999999999999999
Q ss_pred ccccCchhhhhhcHHHHHHHHHHHHHhhcchhhhhHhhhhhhHHhhCCCcccCCCCCCCCCCCCcccccccceeeecccc
Q 016562 230 LTRFTEPIYQEWGFWKRLSYQYMAGFTARWKYYFIWSISEASIIICGLGFSGWTESSPPKPKWDRAKNVDILGVEFAKSA 309 (387)
Q Consensus 230 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~kyy~~w~l~e~~~~~~G~g~~g~~d~~~g~~~~~~~~n~~~~~~e~~~s~ 309 (387)
..++.+++|...++..|+.|.++.++..|+|||++|.++|++|+++|+||||+ |. +.+..||+++|+|++++|+++|+
T Consensus 243 ~k~lL~~df~~~~~~~r~~Yl~l~~f~~R~KyY~AW~~S~GsCil~glgyNg~-Ds-tq~~rwdrvrNiD~~kvE~A~nv 320 (512)
T COG5202 243 RKHLLEEDFPVRLLPMRWAYLYLFTFGNRIKYYFAWHFSHGSCILFGLGYNGP-DS-TQKIRWDRVRNIDFMKVELATNV 320 (512)
T ss_pred HHHhcCCcccccchhHHHHHHHHHHHHhheeeeEEEEecCCcEEEeccccCCc-cc-ccccchhhhccCCceEEehhhhH
Confidence 99999999988899999999999999999999999999999999999999999 77 47889999999999999999999
Q ss_pred cccccccchhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 016562 310 VQIPLVWNIQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRDGSKLCLQK 385 (387)
Q Consensus 310 ~~~~~~Wni~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalWHG~~~gyy~~F~~~~~~~~~~~~~r~~~~~~ 385 (387)
+|..+.||++++.|||+|||-|+.++|+||++.+++-||++||+|||.+||||++|++.++.+.+.|.-||.+||-
T Consensus 321 k~~leaWNmnTnkWLkn~vylrv~kkgkkpgF~stl~Tf~iSA~WHGi~pgYyltF~s~a~~qt~~K~~rR~~rpf 396 (512)
T COG5202 321 KDLLEAWNMNTNKWLKNSVYLRVVKKGKKPGFWSTLGTFAISALWHGINPGYYLTFLSLAASQTIVKENRRLLRPF 396 (512)
T ss_pred HHHHHHhccccchhhhcceEEEEEecCCCcchHHHHHHHHHHHHHccCCchHHHHHHHHHHHhHHHHHHHhhcCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999973
No 4
>KOG2705 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=1.1e-60 Score=437.30 Aligned_cols=369 Identities=21% Similarity=0.341 Sum_probs=338.7
Q ss_pred hhhHHHHHhhhCCChhHHHHHHHHHHHHHHHHHhhcCC---CcchhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 016562 3 LLEMESMAGSIGVSVAVLRFLLCYVATIPVSFLWRFVP---SRTGKHVYAAASGALLSYLSFGFSSNLHFLVPMLLGYLS 79 (387)
Q Consensus 3 ~~~~~~~~~~~g~~~d~~~~l~~ll~~~p~~~i~r~l~---~~~~r~~~~~~~G~~~~~~~~g~~~~~~~l~~~l~~Y~i 79 (387)
|..++.+|+.+|.|||.+|++++.++.+|++.+.|... ..+.+|.+..++|+.+.++.+|... .|.+++++.+|++
T Consensus 1 ~g~~~~~~~~~~~~~~alrll~svlagyp~a~~~~~f~~~~~~~~~h~ff~~~g~~l~~fn~g~~~-~h~i~ailtt~f~ 79 (471)
T KOG2705|consen 1 MGVVGALSEVTSASEDALRLLISVLAGYPLAVVHRTFFYNKPAQHQHLFFVIVGLSLWMFNCGSSV-IHPILAILTTFFI 79 (471)
T ss_pred CcchhhhhcccCCcHHHHHHHHHHHcCCcHHHHHHHHhhcCccceeeEeeeeecceeeeeecCCcc-hhHHHHHHHHHHH
Confidence 46789999999999999999999999999999999753 3577999999999999999999988 8999999999999
Q ss_pred H-Hhccc-ccchHHHHHHHHHHHHHHhhhhcCCCccCccccchhHHHHHHHHHHhhhhccccCCcchhhhhHHHhhcccc
Q 016562 80 M-AIYRA-KCGIITFFLGFGYLIGCHVYYMSGDAWKEGGIDATGALMVLTLKVISCAINYNDGLVTEENLREAQKKNRLT 157 (387)
Q Consensus 80 ~-~~~~~-~~~~~~~~~~l~~L~~~~~~~~~~~~w~~~~~d~t~~~mv~tlk~is~a~d~~dg~~~~~~~~~~~~~~~i~ 157 (387)
. ++.+. ....+.+++-|+||+...++. ..++++ +.||+|.|++|+|+|++++|++||.+++|++++|||+.|++
T Consensus 80 ~~~~~~t~~~~~~~fif~m~yLL~GY~yt-~t~~YD---I~WTmPhCiltLr~IGl~~Dv~DG~k~~~~Ls~dQk~tAi~ 155 (471)
T KOG2705|consen 80 TNFMAGTDASIYAAFIFFMGYLLIGYWYT-ETDTYD---ITWTMPHCILTLRFIGLVMDVYDGAKKPEHLSPDQKLTAIS 155 (471)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHheeee-ccCccc---eEeecchHHHhhhhhheeeeeccCCCChhhcChhhhhhhhc
Confidence 8 45433 356678999999999987764 456777 89999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHhhccCccccccccchhHHHHHHhhCCCC-CCCCCCcHHHHHHHHHHHHHHHHHHHHhcccccccccCch
Q 016562 158 RLPSLIEYIGYCLCCGSHFAGPVYEMKDYLEWTERKGIW-SEPWPSPYAATLRAILQAGVCMALYLYLVPQYPLTRFTEP 236 (387)
Q Consensus 158 ~~psll~yl~Y~~~fp~~l~GP~~~y~~y~~~i~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~~~~~~~~~~~ 236 (387)
+.||++|.+++.+||.+++.||.++++.|+++++++-.. ++++|.+..++++|+..|++++++.....++.|.++..+|
T Consensus 156 ~~PsLLEiaaFsyF~~gfLVGPQF~~~~y~~fV~Ge~~d~~G~~p~s~~p~i~Rf~aG~fYlv~~q~g~~~ipd~Yflt~ 235 (471)
T KOG2705|consen 156 DKPSLLEIAAFSYFFQGFLVGPQFTLSKYRSFVNGEWLDSDGQPPKSALPSIGRFLAGCFYLVLHQWGQFWIPDQYFLTD 235 (471)
T ss_pred CCchHHHHHHHhhhccceeecCcCcHHHHHHHhCCeeecCCCCCCcccchhhHhHhcccHHHHHHHhccccCchhhcCCh
Confidence 999999999999999999999999999999999987543 4567777888999999999999999999999999999999
Q ss_pred hhhhhcHHHHHHHHHHHHHhhcchhhhhHhhhhhhHHhhCCCcccCCCCCCCCCCCCcccccccceeeeccccccccccc
Q 016562 237 IYQEWGFWKRLSYQYMAGFTARWKYYFIWSISEASIIICGLGFSGWTESSPPKPKWDRAKNVDILGVEFAKSAVQIPLVW 316 (387)
Q Consensus 237 ~f~~~~~~~~~~~~~~~~~~~~~kyy~~w~l~e~~~~~~G~g~~g~~d~~~g~~~~~~~~n~~~~~~e~~~s~~~~~~~W 316 (387)
+|++.|++.|+.++.+.+-+...||...|.++|+++++.|+|++|. |.+ |+++||+|+|.+++..|+.+...+.+.++
T Consensus 236 ~y~n~sF~~R~~y~l~W~kf~lYKY~~cWLiTEGa~Il~GLg~nG~-d~~-G~~~Wdgc~n~ki~l~ETg~~~~~~v~SF 313 (471)
T KOG2705|consen 236 AYNNLSFFWRWSYVLLWFKFTLYKYCACWLITEGASILSGLGHNGK-DAE-GNDRWDGCRNLKIILWETGHDYNSVVESF 313 (471)
T ss_pred hhhcccHHHHHHHHHHHHHHHHHHHhhheeeecchHhhccCCcCCc-ccC-CCCCcccccceEEEEEecCCccceeeeee
Confidence 9999999999999999888999999999999999999999999998 655 99999999999999999999999999999
Q ss_pred chhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhh
Q 016562 317 NIQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRDGSK 380 (387)
Q Consensus 317 ni~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalWHG~~~gyy~~F~~~~~~~~~~~~~r~ 380 (387)
|+++|+|.++|+|+|+...++| ..+..+|-.+-|+|||.|.|||++|..--.++.+|+.+-|
T Consensus 314 N~nTN~wv~~yI~kRLkflnNk--~~S~g~tL~fLAiWHGyHsGY~~~F~me~~~V~~e~Q~~r 375 (471)
T KOG2705|consen 314 NCNTNTWVKNYIHKRLKFLNNK--LASHGITLSFLAIWHGYHSGYFLLFGMELGCVQAENQLYR 375 (471)
T ss_pred ecChhHHHHHHHHHHHHHhcch--hhhhhHHHHHHHHHhcccchHHHHHhhHhheeehHHHHHH
Confidence 9999999999999999877775 3688999999999999999999999999899999988865
No 5
>KOG2706 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=1.2e-44 Score=328.19 Aligned_cols=358 Identities=24% Similarity=0.283 Sum_probs=296.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HhcccccchHHHH
Q 016562 15 VSVAVLRFLLCYVATIPVSFLWRFVPSRTGKHVYAAASGALLSYLSFGFSSNLHFLVPMLLGYLSM-AIYRAKCGIITFF 93 (387)
Q Consensus 15 ~~~d~~~~l~~ll~~~p~~~i~r~l~~~~~r~~~~~~~G~~~~~~~~g~~~~~~~l~~~l~~Y~i~-~~~~~~~~~~~~~ 93 (387)
.+.|++.|..|++.|+..+.-.|++.+...|.+.+...|+....++-|.+. +|.+.++.+.-.+. +..+++.|..+|.
T Consensus 1 MSiDDvIY~~cLL~c~GAg~YVkKIadegqr~LaS~~LG~~m~l~i~Glh~-lhcf~~~ai~~aa~LLah~kkghLvtFa 79 (476)
T KOG2706|consen 1 MSIDDVIYTGCLLFCFGAGCYVKKIADEGQRILASGALGFAMSLFIIGLHI-LHCFGICAIAIAAQLLAHKKKGHLVTFA 79 (476)
T ss_pred CchhhhhhhhhHHhhcccchhhhhhccCCceEEeeccccceeheehhcchH-HHHHHHHHHHHHHHHHhCCCCCceEEeH
Confidence 368999999999999999999999998888999999999999999999999 88888877766666 4456677888999
Q ss_pred HHHHHHHHHHhhhhcC-CCccCccccchhHHHHHHHHHHhhhhccccCCcc----hhhhhHHHhh----------ccccc
Q 016562 94 LGFGYLIGCHVYYMSG-DAWKEGGIDATGALMVLTLKVISCAINYNDGLVT----EENLREAQKK----------NRLTR 158 (387)
Q Consensus 94 ~~l~~L~~~~~~~~~~-~~w~~~~~d~t~~~mv~tlk~is~a~d~~dg~~~----~~~~~~~~~~----------~~i~~ 158 (387)
..++||.++++..... .+-.+ -..+.+||++|+|++++++|-.+.... +||.+++|++ +...|
T Consensus 80 ~mFgYLmFfR~~df~fginev~--gHTNmIQlIiTLki~GIaFEenaAWkrlqahdeqkkndqrdVHke~~ieikdYd~E 157 (476)
T KOG2706|consen 80 TMFGYLMFFRFADFIFGINEVA--GHTNMIQLIITLKIIGIAFEENAAWKRLQAHDEQKKNDQRDVHKEDEIEIKDYDTE 157 (476)
T ss_pred HHHHHHHHHHHHHhcccccccc--CccchhhheeeeEEEEEEeccchHHHHhhhhhhhhccchhhccccCCcchhhhhhc
Confidence 9999999998876442 11111 357899999999999999998776532 4555555532 12346
Q ss_pred CC--CHHHHHHHhhccCccccccccchhHHHHHHhhCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhcccccccccCch
Q 016562 159 LP--SLIEYIGYCLCCGSHFAGPVYEMKDYLEWTERKGIWSEPWPSPYAATLRAILQAGVCMALYLYLVPQYPLTRFTEP 236 (387)
Q Consensus 159 ~p--sll~yl~Y~~~fp~~l~GP~~~y~~y~~~i~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~~~~~~~~~~~ 236 (387)
.| |..|.+.|.|.|.|+++||.++|+.++|..+.... + -.| ++...++.+..++++..++++..+++|+++..++
T Consensus 158 L~slsaaEi~~Y~f~f~Gl~TGPYYrYq~~~D~fem~fK-s-~aP-TlEakle~lkyalf~calflaTN~m~PLD~alSD 234 (476)
T KOG2706|consen 158 LPSLSAAEIFAYFFHFCGLFTGPYYRYQMLIDSFEMIFK-S-WAP-TLEAKLEFLKYALFSCALFLATNHMFPLDIALSD 234 (476)
T ss_pred cccchHHHHHHHHHHHhhhccCcceehhhhhhhcccchh-c-cCc-hHHHHHHHHHHHHHHhHHHHhhccccchHHhhhh
Confidence 67 78999999999999999999999999998775432 1 122 3444555566688889999999999999999888
Q ss_pred hh-hhhcHHHHHHHHHHHHHhhcchhhhhHhhhhhhHHhhCCCcc-cCCCCCC------------------CCCCCCccc
Q 016562 237 IY-QEWGFWKRLSYQYMAGFTARWKYYFIWSISEASIIICGLGFS-GWTESSP------------------PKPKWDRAK 296 (387)
Q Consensus 237 ~f-~~~~~~~~~~~~~~~~~~~~~kyy~~w~l~e~~~~~~G~g~~-g~~d~~~------------------g~~~~~~~~ 296 (387)
+| ++.|+.+|++|+++..+.++.|.|.+|.++|+.|.++|+|.. .-+||+. .+.+++.+.
T Consensus 235 ~ffedrsF~~RLlYa~~~FftFkaRiYs~laiaEciCtiaGfGaYP~~SdPk~geGPr~~~a~~K~dadenh~~nf~aIV 314 (476)
T KOG2706|consen 235 AFFEDRSFFTRLLYAALIFFTFKARIYSALAIAECICTIAGFGAYPAASDPKIGEGPRDLNAFDKLDADENHEMNFDAIV 314 (476)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccccccccCCCccCcCchhhhhhhccccccccccccceeE
Confidence 86 567899999999999999999999999999999999999963 2235543 235788999
Q ss_pred ccccceeeecccccccccccchhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 016562 297 NVDILGVEFAKSAVQIPLVWNIQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSR 376 (387)
Q Consensus 297 n~~~~~~e~~~s~~~~~~~Wni~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalWHG~~~gyy~~F~~~~~~~~~~~ 376 (387)
|.|++.+|++..++|-+++||.++++||.-|||++.. .+| +++-.|+++||.|||+++|+|++|.-.+++...|.
T Consensus 315 N~~ileVE~c~~FRdGMK~WN~cVQ~WLAlnV~klf~--skk---yRt~aTlLcSA~WHGfr~Ghffc~~ga~f~a~LED 389 (476)
T KOG2706|consen 315 NLDILEVEFCDGFRDGMKAWNRCVQTWLALNVHKLFK--SKK---YRTEATLLCSAVWHGFRAGHFFCFGGAAFCAILED 389 (476)
T ss_pred eccccceeechhhhHHHHHHHHHHHHHHHHHHHHhcc--hhh---hcccceEeeehhhccccccceEEeccHHHHHHHHH
Confidence 9999999999999999999999999999999999986 332 47889999999999999999999999999999999
Q ss_pred HHhhhcc
Q 016562 377 DGSKLCL 383 (387)
Q Consensus 377 ~~r~~~~ 383 (387)
++.|.++
T Consensus 390 m~dKLV~ 396 (476)
T KOG2706|consen 390 MIDKLVP 396 (476)
T ss_pred HHHhhcc
Confidence 9887654
No 6
>KOG4312 consensus Predicted acyltransferase [General function prediction only]
Probab=100.00 E-value=5e-40 Score=300.81 Aligned_cols=324 Identities=19% Similarity=0.281 Sum_probs=249.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHhcccc--cchHHHHHH
Q 016562 18 AVLRFLLCYVATIPVSFLWRFVPSRTGKHVYAAASGALLSYLSFGFSSNLHFLVPMLLGYLSMAIYRAK--CGIITFFLG 95 (387)
Q Consensus 18 d~~~~l~~ll~~~p~~~i~r~l~~~~~r~~~~~~~G~~~~~~~~g~~~~~~~l~~~l~~Y~i~~~~~~~--~~~~~~~~~ 95 (387)
|++.-++|+ |+...++-+.--+...||+.....|.+.++...|.+. ...++...++|+.+.+.++. ...+..+.+
T Consensus 31 ~~i~~ll~K--OGacrll~~l~l~s~~~h~~hva~g~f~l~~f~~~hl-~~~ill~~~~yl~L~L~r~~~~g~~iLav~~ 107 (449)
T KOG4312|consen 31 LTISKLLCL--CLACRLLKHLPLSSTVRHYVHVAAGTFTLMWFSRNHL-QSAILLNMFSYLSLALARKQFSGYIILAVIS 107 (449)
T ss_pred HHHHHHHHH--HHHHHHHHHCCCchhhHHHHHhhhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccCCeEEhHHHH
Confidence 344444433 3333444443224578999999999999999999888 55555568899988554432 122222445
Q ss_pred HHHHHHHHhhhhcCC-CccCccccchhHHHHHHHHHHhhhhcccc-CCcchhhhhHHHhhcccccCCCHHHHHHHhhccC
Q 016562 96 FGYLIGCHVYYMSGD-AWKEGGIDATGALMVLTLKVISCAINYND-GLVTEENLREAQKKNRLTRLPSLIEYIGYCLCCG 173 (387)
Q Consensus 96 l~~L~~~~~~~~~~~-~w~~~~~d~t~~~mv~tlk~is~a~d~~d-g~~~~~~~~~~~~~~~i~~~psll~yl~Y~~~fp 173 (387)
++++...+..-...+ .|+ +.+|+||+..||++|++||... |..+ .+.|++.+|++|++|+|
T Consensus 108 l~~~l~~e~~~~r~~~~w~----~~RGiqMiv~Mkl~slgFdL~~~g~~~-------------~r~p~p~~y~gYiYfp~ 170 (449)
T KOG4312|consen 108 LLIALQNECRHYRSEDYWL----SIRGIQMIVIMKLTSLGFDLEKAGSNK-------------FRFPQPSSYVGYIYFPP 170 (449)
T ss_pred HHHHHHHHHHhhcccchHH----HhhhhHHHHHHHHHHhhccccccCCcC-------------ccCCChHHhheehccCc
Confidence 555544433222233 475 8999999999999999999976 4433 25799999999999999
Q ss_pred ccccccccchhHHHHHHhhCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhcccccccccCchhhhhhcHHHHHHHHHHH
Q 016562 174 SHFAGPVYEMKDYLEWTERKGIWSEPWPSPYAATLRAILQAGVCMALYLYLVPQYPLTRFTEPIYQEWGFWKRLSYQYMA 253 (387)
Q Consensus 174 ~~l~GP~~~y~~y~~~i~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 253 (387)
++..||+.+|..|.+..+.++.. ..++...+.+.+.++++.....+++++. .|-|...| ++..+|..
T Consensus 171 tiifGPw~SF~~y~~~~~~r~~~----~~~l~~~~~~~~lail~~i~s~cV~p~l------f~fF~~ss---~fl~~y~~ 237 (449)
T KOG4312|consen 171 TIIFGPWLSFEQYFKMRDKRWTG----SENLLGFIIQSLLAILNAITSACVSPCL------FEFFEPSS---QFLEDYLT 237 (449)
T ss_pred eeeeccchhHHHHHHHhcCCCcc----hHHHHHHHHHHHHHHHHHHHHHhhhhHH------HhhhCchH---HHHHHHHH
Confidence 99999999999999999887653 1234556677778888888888888763 22233333 67789999
Q ss_pred HHhhcchhhhhHhhhhhhHHhhCCCcccCCCCCCCCCCCCcccccccceeeecccccccccccchhhhhhhhhhcccccc
Q 016562 254 GFTARWKYYFIWSISEASIIICGLGFSGWTESSPPKPKWDRAKNVDILGVEFAKSAVQIPLVWNIQVSTWLRHYVYDRLI 333 (387)
Q Consensus 254 ~~~~~~kyy~~w~l~e~~~~~~G~g~~g~~d~~~g~~~~~~~~n~~~~~~e~~~s~~~~~~~Wni~~~~WL~~YVY~~l~ 333 (387)
+.++|+++||+-..+|+...++|-|++..+|+ +....-+|+++|+|+|..+.+++||+++|+||++|||++-.
T Consensus 238 A~SfrfShYFVg~~tqA~~~~~gdGatkEsDm-------l~p~vs~PlniE~pRS~~~~V~sWN~Pmh~wL~~yifk~~l 310 (449)
T KOG4312|consen 238 AMSFRFSHYFVGLSTQAFVLMLGDGATKESDM-------LVPVVSNPLNIEFPRSTLQTVSSWNKPMHTWLHEYIFKRRL 310 (449)
T ss_pred HhhhhhhhhhHHHHHHHHHHHcCCCccccccc-------chhhhcCceeccccHHHHHHHHHcCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999766544443 34456679999999999999999999999999999999876
Q ss_pred cCCCCchhHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhccc
Q 016562 334 QNGKKPGFFQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRDGSKLCLQ 384 (387)
Q Consensus 334 ~~g~~~~~~~~~~Tf~vSalWHG~~~gyy~~F~~~~~~~~~~~~~r~~~~~ 384 (387)
++|. ..+++.||++|++-||+....+++.+..|++++.|..+||++..
T Consensus 311 r~~t---~~~Vl~TyavSsLLHG~df~~~~vLlsLaFiay~E~vlRkrLa~ 358 (449)
T KOG4312|consen 311 RNST---ACNVLFTYAVSSLLHGLDFQMTIVLLSLAFIAYSETVLRKRLAA 358 (449)
T ss_pred ccCh---HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443 57999999999999999999999999999999999999998754
No 7
>PF03062 MBOAT: MBOAT, membrane-bound O-acyltransferase family; InterPro: IPR004299 The MBOAT (membrane bound O-acyl transferase) family of membrane proteins contains a variety of acyltransferase enzymes. A conserved histidine has been suggested to be the active site residue [].
Probab=100.00 E-value=1.3e-40 Score=321.72 Aligned_cols=254 Identities=33% Similarity=0.540 Sum_probs=201.3
Q ss_pred ccchhHHHHHHHHHHhhhhccccCCcchhhhhHHHhhcc----------cccCCCHHHHHHHhhccCccccccccchhHH
Q 016562 117 IDATGALMVLTLKVISCAINYNDGLVTEENLREAQKKNR----------LTRLPSLIEYIGYCLCCGSHFAGPVYEMKDY 186 (387)
Q Consensus 117 ~d~t~~~mv~tlk~is~a~d~~dg~~~~~~~~~~~~~~~----------i~~~psll~yl~Y~~~fp~~l~GP~~~y~~y 186 (387)
+++++.+|++++|.+++++|++||...+++.++++++.+ ..+.||++|+++|+++||++++||+++|+||
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ps~l~~l~Y~~~fp~~~~GP~~~y~~f 93 (322)
T PF03062_consen 14 LDWTLGLMYLTLKLISYAFDYYDGKFYEESLSQDQKKIATLRLRSSKRKIKKYPSLLEYLSYLFFFPTLLAGPILSYRDF 93 (322)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHccCCccchHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 789999999999999999999999866555555544433 7788999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhcccccccccCchhhhhhcHHHHHHHHHHHHHhhcchhhhhH
Q 016562 187 LEWTERKGIWSEPW-PSPYAATLRAILQAGVCMALYLYLVPQYPLTRFTEPIYQEWGFWKRLSYQYMAGFTARWKYYFIW 265 (387)
Q Consensus 187 ~~~i~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~l~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~kyy~~w 265 (387)
.++++++....... ++....+++.+..+++..++.....+.++.+.+..+++.+.+...+...+......++.++|+.|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (322)
T PF03062_consen 94 LDFIRSRRFRWDPRQKSVFWRGLRLLFLGLFKKILIAYFLSFFPVNYLDSDEFWEKSLFLRLSLIYLWLFGFAYKYYLYF 173 (322)
T ss_pred HHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhccchhhcccccchhhHHHHHHHHHHHHHHHHH
Confidence 99999876532111 12355667777777766555555555566666666666655544555556666666666666644
Q ss_pred ------hhhhhhHHhhCCCcccCCCCCCCCCCCCcccccccce-eeecccccccccccchhhhhhhhhhcccccc--cCC
Q 016562 266 ------SISEASIIICGLGFSGWTESSPPKPKWDRAKNVDILG-VEFAKSAVQIPLVWNIQVSTWLRHYVYDRLI--QNG 336 (387)
Q Consensus 266 ------~l~e~~~~~~G~g~~g~~d~~~g~~~~~~~~n~~~~~-~e~~~s~~~~~~~Wni~~~~WL~~YVY~~l~--~~g 336 (387)
.++|+.+++.|++++ ++.|.|+++ +|.++|++|+||+||+++|.|||||||+|++ +++
T Consensus 174 ~~~~~~~~a~~~~~~~G~~~~-------------~~~~~~~~~~~~~~~~~~~~~r~WN~~v~~wL~~yVY~~~~~~~~~ 240 (322)
T PF03062_consen 174 KFSGYWLFAEAAAILFGIGYD-------------GFAPRNFYRCWENSTSFSDFWRSWNISVHKWLKRYVYKPLGGSSRG 240 (322)
T ss_pred HHHhccHHHHHHHHcCCcccc-------------ccCCcCchhhhhhcCcHHHHHHHhhhHHHHHHHHheeCcchhcccc
Confidence 788999999998863 344555555 8999999999999999999999999999996 245
Q ss_pred CCchhHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhhhcc
Q 016562 337 KKPGFFQLLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRDGSKLCL 383 (387)
Q Consensus 337 ~~~~~~~~~~Tf~vSalWHG~~~gyy~~F~~~~~~~~~~~~~r~~~~ 383 (387)
..++..++++||++||+|||+++||+++++..++...+|+..++..+
T Consensus 241 ~~~~~~a~~~tf~~sa~WHg~~~~~~~~~~~~~l~~~~e~~~~~~~~ 287 (322)
T PF03062_consen 241 KLSKFLATLATFLFSALWHGFYPGYYLWFFFNGLGLFLERLFRPLFR 287 (322)
T ss_pred chhhHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 55677899999999999999999999999999999999999988765
No 8
>COG1696 DltB Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=8.4e-30 Score=248.45 Aligned_cols=317 Identities=18% Similarity=0.263 Sum_probs=201.1
Q ss_pred HHHHHHHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH-hc----ccc-cch-HHHHHH
Q 016562 23 LLCYVATIPVSFLWRFVPSRTGKHVYAAASGALLSYLSFGFSSNLHFLVPMLLGYLSMA-IY----RAK-CGI-ITFFLG 95 (387)
Q Consensus 23 l~~ll~~~p~~~i~r~l~~~~~r~~~~~~~G~~~~~~~~g~~~~~~~l~~~l~~Y~i~~-~~----~~~-~~~-~~~~~~ 95 (387)
.+.+++.+|+-+.. +..++.+++..++.++++ +..++........+.+..+|.+.. .. +++ ... ....++
T Consensus 8 ~l~~~aflpi~~~~--~~~~~~~~~~~l~s~~~~-~~~~~~~f~~l~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~v~~~ 84 (425)
T COG1696 8 YLFLLAFLPIYWLG--LFGKRLQNYLLLVSNFFL-LAIFSLVFLILVALYIYFNYQLALLLFYDRYRKRRILAGCGVFYL 84 (425)
T ss_pred HHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 35566777776665 334456666655555544 555665552323344555666552 21 111 111 122233
Q ss_pred HHHHHHHHhhhhc----CCCccCccccchh---HHH--HHHHHHHhhhhccccCCcchhhhhHHHhhcccccCCCHHHHH
Q 016562 96 FGYLIGCHVYYMS----GDAWKEGGIDATG---ALM--VLTLKVISCAINYNDGLVTEENLREAQKKNRLTRLPSLIEYI 166 (387)
Q Consensus 96 l~~L~~~~~~~~~----~~~w~~~~~d~t~---~~m--v~tlk~is~a~d~~dg~~~~~~~~~~~~~~~i~~~psll~yl 166 (387)
...|.++++.... ...|++ .+..+ +.- ..|.|.+++-+|++||+.++. + ..++++|+
T Consensus 85 ~~iL~~f~~~~~~v~~~~~~~~~--~~~~~~~~plGISf~TF~~ia~l~e~~~~~~~~~----------~--~~~fl~f~ 150 (425)
T COG1696 85 IAILGIFKYFIFKVLPIAIFWGP--LDIIGKILPLGISFYTFKSIAYLVEVRDGLIAEH----------I--DWNFLRFL 150 (425)
T ss_pred HHHHHHHHHHHHhhhhhhccCCc--hhhhcccccceeEEEeeeeheehhhHhcCchHHh----------h--hHHHHHHH
Confidence 3355666554322 122332 12222 111 258899999999999986421 1 36999999
Q ss_pred HHhhccCccccccccchhHHHHHHhhCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhccccc-ccccCchhhhhhcHHH
Q 016562 167 GYCLCCGSHFAGPVYEMKDYLEWTERKGIWSEPWPSPYAATLRAILQAGVCMALYLYLVPQYP-LTRFTEPIYQEWGFWK 245 (387)
Q Consensus 167 ~Y~~~fp~~l~GP~~~y~~y~~~i~~~~~~~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~~~~-~~~~~~~~f~~~~~~~ 245 (387)
.|+.|||++++|||.||++|.+|.+.+.. +..++....++.++..|++...+ +++... ......+.+++.+-
T Consensus 151 ~yvsFfP~~isGPI~r~~~f~~q~~~~~~--~~~~~~~~~~~~~i~~G~lkK~i---Ia~~l~~~a~~~~~~~~~~~~-- 223 (425)
T COG1696 151 AYLSFFPTFISGPIIRFSRFVSQSKSPLP--SFSPDLIALGAVLILLGFLKKEI---IAYFLAIYAILVFGAFANYTV-- 223 (425)
T ss_pred HHHHHcchhhcCchhHHHHHHHhcCCCCc--cccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhccccccccc--
Confidence 99999999999999999999999998432 23344555677777788776433 333211 11111112222221
Q ss_pred HHHHHHHHHHhhcchhhhhHhhhhhhHHhhCCCcccCCCCCCCCCCCCcccccccceeeecccccccccccchhhhhhhh
Q 016562 246 RLSYQYMAGFTARWKYYFIWSISEASIIICGLGFSGWTESSPPKPKWDRAKNVDILGVEFAKSAVQIPLVWNIQVSTWLR 325 (387)
Q Consensus 246 ~~~~~~~~~~~~~~kyy~~w~l~e~~~~~~G~g~~g~~d~~~g~~~~~~~~n~~~~~~e~~~s~~~~~~~Wni~~~~WL~ 325 (387)
...+++..+.+..+.|+++. ..+..+.|++.. .+.+.++|+| .+..++|++|+|||||||+++|+|
T Consensus 224 -~~~~~~~~~~y~~qlyfDFs--GYsd~aig~a~l---------~Gi~~PeNFn--~P~~a~si~~FWrRWHmSLS~W~r 289 (425)
T COG1696 224 -FTSAWLGMYAYNIQLYFDFS--GYSDFALGLALL---------FGIRLPENFN--RPYLAKSIKDFWRRWHMSLSTWFR 289 (425)
T ss_pred -HHHHHHHHHHHHHHHHHcch--hHHHHHHHHHHH---------cCCCCchhcc--cHHHHhhHHHHHHHHHhhHHHHhh
Confidence 33566777788888898764 566666666532 1445778888 468899999999999999999999
Q ss_pred hhcccccccCCCC----chhHH-HHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 016562 326 HYVYDRLIQNGKK----PGFFQ-LLATQTVSAVWHGLYPGYIIFFVQSALMIAGSRDGS 379 (387)
Q Consensus 326 ~YVY~~l~~~g~~----~~~~~-~~~Tf~vSalWHG~~~gyy~~F~~~~~~~~~~~~~r 379 (387)
||||.|+| |+| ++..+ .+.+|.++++|||..+.|.+.-+..|.....++..+
T Consensus 290 dYIyipLg--gsr~~~~~~~~~~l~~~~li~g~WHG~~w~fIlwG~~hg~~l~~~~~~~ 346 (425)
T COG1696 290 DYIYIPLG--GSRKKILRTQINFLLINFLLMGLWHGLGWTFILWGLLHGVLLVLYRLIS 346 (425)
T ss_pred hheEeecC--CcccchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 443 33445 789999999999999877666666666666777665
No 9
>KOG3860 consensus Acyltransferase required for palmitoylation of Hedgehog (Hh) family of secreted signaling proteins [Signal transduction mechanisms]
Probab=99.88 E-value=4.7e-21 Score=187.00 Aligned_cols=309 Identities=15% Similarity=0.210 Sum_probs=203.0
Q ss_pred CcchhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHhh--hhc-CCCccCccc
Q 016562 41 SRTGKHVYAAASGALLSYLSFGFSSNLHFLVPMLLGYLSMAIYRAKCGIITFFLGFGYLIGCHVY--YMS-GDAWKEGGI 117 (387)
Q Consensus 41 ~~~~r~~~~~~~G~~~~~~~~g~~~~~~~l~~~l~~Y~i~~~~~~~~~~~~~~~~l~~L~~~~~~--~~~-~~~w~~~~~ 117 (387)
.|+.|-.+.+++|+.++...+|+.. .+.++.++.+|.+..+ ...++...........++.. ... -+.|.++..
T Consensus 87 ~~~~r~~~~~~~g~l~~~~~~g~~~-~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~g~~ 162 (494)
T KOG3860|consen 87 APKLRSWFYAVYGALALMGTLGWSS-LFLLAHVLKSFRVLVL---ISLWLTGGLTLAIWASFRNLDPVLSPLVWWYSGIV 162 (494)
T ss_pred cccchHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhhchhhccccceeccee
Confidence 4678999999999999999899555 6777888888777632 13445554444444444421 111 122332211
Q ss_pred c-chhHHHHHHHHHHhhhhccccCCcchhhhhHHHhhcccccCCCHHHHHHHhhccCccccccccchhHHHHHHhhCCCC
Q 016562 118 D-ATGALMVLTLKVISCAINYNDGLVTEENLREAQKKNRLTRLPSLIEYIGYCLCCGSHFAGPVYEMKDYLEWTERKGIW 196 (387)
Q Consensus 118 d-~t~~~mv~tlk~is~a~d~~dg~~~~~~~~~~~~~~~i~~~psll~yl~Y~~~fp~~l~GP~~~y~~y~~~i~~~~~~ 196 (387)
. +..-......|+.+.+.|...-..++.+. ...+...+..+..+|+.|+++.|-+..|||++|++|..|.+++...
T Consensus 163 ~~~~~~~~~t~~~~~~~n~s~~~~~~~~~~~---d~~~~~~~~~l~~~yl~Y~~y~p~~~~gPIitfn~f~~q~~~~~~s 239 (494)
T KOG3860|consen 163 PRWRVFFTFTLLRLLSYNLSLFLCWIKSGAY---DSTRHPDQDYLLLNYLDYLFYAPVFTEGPIITFNRFLAQSEQPEPS 239 (494)
T ss_pred eeehhhhHHHHHHHHHcCCChhhhhhcccch---hhhhCCcHHHHHHHHHHHHHhhHHHhcCcchhHHHHHHHhcCCCcc
Confidence 1 22233345567778888776554321111 1111334456788999999999999999999999999999977541
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhcccccc-cccCchhhhh-hcHHHHHHHHHHHHHhhcchhhhhHhhhhhhHHh
Q 016562 197 SEPWPSPYAATLRAILQAGVCMALYLYLVPQYPL-TRFTEPIYQE-WGFWKRLSYQYMAGFTARWKYYFIWSISEASIII 274 (387)
Q Consensus 197 ~~~~~~~~~~~~~~l~~~l~~~~l~~~~~~~~~~-~~~~~~~f~~-~~~~~~~~~~~~~~~~~~~kyy~~w~l~e~~~~~ 274 (387)
.+.+....-.++.+.+..+..++.+++.+ +...+..+.+ .|.+..-...+.....+..||-..|..-...+..
T Consensus 240 -----~s~k~~~~~a~R~~~~~l~iE~ilHf~yi~AI~~~~~~~n~~~~~~~~~iay~~l~~~~LK~lvlfg~~~~~A~l 314 (494)
T KOG3860|consen 240 -----LSLKLIVWYAVRSVSAFLLIEFILHFFYILAISSDGAWENKLPYVESAGIAYFNLNFFWLKYLVLFGVFRLWALL 314 (494)
T ss_pred -----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhcCcHHHHhhhHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 12333333333333322222233333222 2223444443 3446666778888999999999999998888888
Q ss_pred hCCCcccCCCCCCCCCCCCcccccccceeeecccccccccccchhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHh
Q 016562 275 CGLGFSGWTESSPPKPKWDRAKNVDILGVEFAKSAVQIPLVWNIQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVW 354 (387)
Q Consensus 275 ~G~g~~g~~d~~~g~~~~~~~~n~~~~~~e~~~s~~~~~~~Wni~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalW 354 (387)
.|++ |+ + |. |.|+....+...+||.||.++|+||.||||+|+| |++...+++.+||.+.|.|
T Consensus 315 Dgi~------pP-e--nm-------PrCI~~~ysy~~~WR~fd~gfn~wLiryvYiplg--Gs~~~~lat~~vFafVa~W 376 (494)
T KOG3860|consen 315 DGID------PP-E--NM-------PRCISNIYSYVFFWRAFDRGFNKWLIRYVYIPLG--GSRSSLLATLAVFAFVALW 376 (494)
T ss_pred cCCC------CC-c--cc-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHeeeccC--CCccHHHHHHHHHHHHHHh
Confidence 7774 22 1 11 4467777899999999999999999999999999 8888888999999999999
Q ss_pred hccchhHHHH-HHHHHHHHHHHHHHhh
Q 016562 355 HGLYPGYIIF-FVQSALMIAGSRDGSK 380 (387)
Q Consensus 355 HG~~~gyy~~-F~~~~~~~~~~~~~r~ 380 (387)
||.+.-.+++ .++ .+....|+..++
T Consensus 377 Hg~~~~ll~W~~L~-~l~L~~E~~~~~ 402 (494)
T KOG3860|consen 377 HGIYLYLLLWSWLN-CLFLLPEIFNKQ 402 (494)
T ss_pred hhhhHHHHHHHHHH-HHHHhHHHHHHH
Confidence 9998754443 333 356677776654
No 10
>KOG0380 consensus Sterol O-acyltransferase/Diacylglycerol O-acyltransferase [Lipid transport and metabolism]
Probab=99.07 E-value=3.6e-09 Score=105.81 Aligned_cols=77 Identities=27% Similarity=0.286 Sum_probs=63.6
Q ss_pred eecccccccccccchhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHhhccc----------hhHHHHHHHHHHHHH
Q 016562 304 EFAKSAVQIPLVWNIQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVWHGLY----------PGYIIFFVQSALMIA 373 (387)
Q Consensus 304 e~~~s~~~~~~~Wni~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalWHG~~----------~gyy~~F~~~~~~~~ 373 (387)
-.+.|..|+||.||+++|+||.||||+|+.+.+ .++..|+++||++||+-|-.- +.++.+++..+++..
T Consensus 394 WNs~s~~~f~R~WN~PVH~wl~RHVY~p~~~~~-~sK~~A~l~vF~vSAVfHEy~~~v~l~~Fr~~~f~~~m~Qipl~~~ 472 (523)
T KOG0380|consen 394 WNSVSWDEFWRTWNVPVHKWLYRHVYKPMLSRG-LSKSAATLAVFFVSAVFHEYVVSVPLRIFRPWMFYLFMFQIPLFFF 472 (523)
T ss_pred hccCcHHHHHHHcCcHHHHHHHHHhhHHHHhcc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446899999999999999999999999998655 455689999999999999765 335556677777888
Q ss_pred HHHHHhhh
Q 016562 374 GSRDGSKL 381 (387)
Q Consensus 374 ~~~~~r~~ 381 (387)
.++..+|+
T Consensus 473 ~~~~~~k~ 480 (523)
T KOG0380|consen 473 TARFFRKR 480 (523)
T ss_pred HHHHhhcc
Confidence 88877766
No 11
>PLN02401 diacylglycerol o-acyltransferase
Probab=99.03 E-value=4.4e-09 Score=103.31 Aligned_cols=54 Identities=30% Similarity=0.411 Sum_probs=46.6
Q ss_pred eecccccccccccchhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHhhccc
Q 016562 304 EFAKSAVQIPLVWNIQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVWHGLY 358 (387)
Q Consensus 304 e~~~s~~~~~~~Wni~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalWHG~~ 358 (387)
-.+.|..|+||.||+++|+||+||||.|+.++|- ++..++++||++||+-|-.-
T Consensus 323 WNs~s~~eywR~WN~PVH~fL~RHVY~~~~~~g~-sk~~A~~~vF~iSA~~HE~v 376 (446)
T PLN02401 323 WNAKTVEEYWRMWNMPVHKWMVRHIYFPCLRNGI-SKGVAILIAFFVSAVFHELC 376 (446)
T ss_pred hccCcHHHHHHHcchHHHHHHHHHcChHhhhCCC-ChHHHHHHHHHHHHHHHHHH
Confidence 4478999999999999999999999999986553 34579999999999999654
No 12
>PLN03242 diacylglycerol o-acyltransferase; Provisional
Probab=98.96 E-value=2.1e-09 Score=104.82 Aligned_cols=54 Identities=28% Similarity=0.409 Sum_probs=46.7
Q ss_pred eecccccccccccchhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHhhccc
Q 016562 304 EFAKSAVQIPLVWNIQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVWHGLY 358 (387)
Q Consensus 304 e~~~s~~~~~~~Wni~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalWHG~~ 358 (387)
-.+.|..|+||.||+++|+|++||||.|+.+.|. ++..++++||++||+-|-.-
T Consensus 298 WNs~s~~eywR~WN~PVH~fl~RHVY~p~~~~g~-sk~~A~~~vF~iSA~~HE~v 351 (410)
T PLN03242 298 WNASEVSEYWRLWNMPVHYWLVRHVYFPCLRLGM-PKQLAILVVFFISAVFHEVC 351 (410)
T ss_pred hccCcHHHHHHHcchHHHHHHHHHcChHhHhCCC-ChHHHHHHHHHHHHHHHHHH
Confidence 4468999999999999999999999999986554 44579999999999999553
No 13
>COG5056 ARE1 Acyl-CoA cholesterol acyltransferase [Lipid metabolism]
Probab=98.56 E-value=2e-05 Score=76.17 Aligned_cols=75 Identities=28% Similarity=0.309 Sum_probs=54.8
Q ss_pred ecccccccccccchhhhhhhhhhcccccccCCCCchhHHHHHHHHHHHHhhccch--------hHHHHH--HHHHHHHHH
Q 016562 305 FAKSAVQIPLVWNIQVSTWLRHYVYDRLIQNGKKPGFFQLLATQTVSAVWHGLYP--------GYIIFF--VQSALMIAG 374 (387)
Q Consensus 305 ~~~s~~~~~~~Wni~~~~WL~~YVY~~l~~~g~~~~~~~~~~Tf~vSalWHG~~~--------gyy~~F--~~~~~~~~~ 374 (387)
.+.|-.||+|-||+++|.||.|.||.|+...-+-.+..+++.||++||+=|-+-. ||.++| +..++++.-
T Consensus 399 Ncvsw~eFsr~WNkPVh~fLlRHVYhssis~~~lsKS~AtL~tFfiSsvvHE~vm~~i~~K~rgy~l~fqllQiPli~lt 478 (512)
T COG5056 399 NCVSWDEFSRIWNKPVHKFLLRHVYHSSISGFKLSKSQATLFTFFISSVVHELVMSIITKKARGYLLFFQLLQIPLIALT 478 (512)
T ss_pred ccccHHHHHHHhCcHHHHHHHHHhhcccccccccchhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3578899999999999999999999999721112345799999999999997643 455554 344455555
Q ss_pred HHHHh
Q 016562 375 SRDGS 379 (387)
Q Consensus 375 ~~~~r 379 (387)
+..+.
T Consensus 479 ~tkF~ 483 (512)
T COG5056 479 NTKFK 483 (512)
T ss_pred hhHHH
Confidence 55443
No 14
>PF13813 MBOAT_2: Membrane bound O-acyl transferase family
Probab=95.35 E-value=0.0073 Score=46.27 Aligned_cols=56 Identities=14% Similarity=-0.002 Sum_probs=45.6
Q ss_pred eeeccccccccc-ccchhhhhhhhhhcccccccCCCC--chhHHHHHHHHHHHHhhccc
Q 016562 303 VEFAKSAVQIPL-VWNIQVSTWLRHYVYDRLIQNGKK--PGFFQLLATQTVSAVWHGLY 358 (387)
Q Consensus 303 ~e~~~s~~~~~~-~Wni~~~~WL~~YVY~~l~~~g~~--~~~~~~~~Tf~vSalWHG~~ 358 (387)
+..+.|++++|. .||..+..-++...+.++...+.+ .++..++++|++||+-|..-
T Consensus 8 ~~~a~Slr~fWg~~WHq~~r~~~~~~~~~~~~~~~~~~~~r~~~l~~aF~~SGl~H~~~ 66 (83)
T PF13813_consen 8 PWEAYSLRRFWGRRWHQLFRRPFSSIGYFPVRRVLGSKASRYLQLFGAFLISGLMHEAG 66 (83)
T ss_pred HHHHCcHHHHHhhHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999996 699999999999999988643322 34678999999999999763
No 15
>KOG4527 consensus Cytochrome c oxidase, subunit VIIc/COX8 [Energy production and conversion]
Probab=41.42 E-value=16 Score=26.74 Aligned_cols=48 Identities=8% Similarity=-0.150 Sum_probs=33.1
Q ss_pred cccccccchhhhhhhhhhcccccccC-CCCchhHHHHHHHHHHHHhhcc
Q 016562 310 VQIPLVWNIQVSTWLRHYVYDRLIQN-GKKPGFFQLLATQTVSAVWHGL 357 (387)
Q Consensus 310 ~~~~~~Wni~~~~WL~~YVY~~l~~~-g~~~~~~~~~~Tf~vSalWHG~ 357 (387)
..++|.=|.+=+-=.++|+++.+..+ -+|.++.+...+|+.+|+|-=+
T Consensus 16 ~~mvR~~h~~~sp~~~~~~geNLPF~vtnKw~~aak~~~ffaigFa~PF 64 (76)
T KOG4527|consen 16 NIMVRPSHMKRSPHFKDGVGENLPFKVTNKWTYAAKHFGFFAIGFAVPF 64 (76)
T ss_pred hhheecccccCCCCcccccCCCCCeEeechHHHHHHHHHHHHHhccCcc
Confidence 33455555555555678999988732 2345588899999999998544
No 16
>PF00376 MerR: MerR family regulatory protein; InterPro: IPR000551 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One of these is the MerR subfamily. MerR, which is found in many bacterial species mediates the mercuric-dependent induction of the mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly, as a dimer, to the 'mer' operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site. Members of the family include the mercuric resistance operon regulatory protein merR; Bacillus subtilis bltR and bmrR; Bacillus glnR; Streptomyces coelicolor hspR; Bradyrhizobium japonicum nolA; Escherichia coli superoxide response regulator soxR; and Streptomyces lividans transcriptional activator tipA [, , , , , ]. Other members include hypothetical proteins from E. coli, B. subtilis and Haemophilus influenzae. Within this family, the HTH motif is situated towards the N terminus.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 3HH0_A 2DG6_A 1R8D_B 1JBG_A 2VZ4_A 2ZHH_A 2ZHG_A 1Q07_A 1Q06_A 1Q05_B ....
Probab=31.98 E-value=44 Score=21.23 Aligned_cols=19 Identities=32% Similarity=0.462 Sum_probs=14.7
Q ss_pred HHHHHhhhCCChhHHHHHH
Q 016562 6 MESMAGSIGVSVAVLRFLL 24 (387)
Q Consensus 6 ~~~~~~~~g~~~d~~~~l~ 24 (387)
+.++|+.+|++++.||+--
T Consensus 2 i~e~A~~~gvs~~tlR~ye 20 (38)
T PF00376_consen 2 IGEVAKLLGVSPRTLRYYE 20 (38)
T ss_dssp HHHHHHHHTS-HHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHH
Confidence 4578999999999999753
No 17
>PF09094 DUF1925: Domain of unknown function (DUF1925); InterPro: IPR015178 Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals. Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This entry represents a domain found in prokaryotic alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1.25 from EC). It is adjacent to the C-terminal domain (see IPR015179 from INTERPRO). The exact function of this domain is, as yet, unknown. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1K1X_B 1K1W_A 1K1Y_A.
Probab=31.64 E-value=31 Score=26.07 Aligned_cols=22 Identities=32% Similarity=0.649 Sum_probs=13.1
Q ss_pred HHHHhhccchhHHHHHHHHHHH
Q 016562 350 VSAVWHGLYPGYIIFFVQSALM 371 (387)
Q Consensus 350 vSalWHG~~~gyy~~F~~~~~~ 371 (387)
=.++|||..-|.|+.-+=-+++
T Consensus 49 Nd~yWHG~FGGlYlp~LR~a~y 70 (80)
T PF09094_consen 49 NDAYWHGLFGGLYLPHLRHAAY 70 (80)
T ss_dssp GGGG--SSS-GGG-HHHHHHHH
T ss_pred CcchhcccccceecHHHHHHHH
Confidence 3679999999999876655553
No 18
>PRK13749 transcriptional regulator MerD; Provisional
Probab=26.23 E-value=53 Score=26.96 Aligned_cols=25 Identities=32% Similarity=0.382 Sum_probs=21.6
Q ss_pred ChhhhHHHHHhhhCCChhHHHHHHH
Q 016562 1 MALLEMESMAGSIGVSVAVLRFLLC 25 (387)
Q Consensus 1 ~~~~~~~~~~~~~g~~~d~~~~l~~ 25 (387)
|++.-+..+|...|++++.+||---
T Consensus 1 M~~~tIgelA~~~gvS~~tiR~YE~ 25 (121)
T PRK13749 1 MSAYTVSRLALDAGVSVHIVRDYLL 25 (121)
T ss_pred CCCCcHHHHHHHHCCCHHHHHHHHH
Confidence 6777889999999999999998743
No 19
>PF00046 Homeobox: Homeobox domain not present here.; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....
Probab=23.23 E-value=75 Score=21.58 Aligned_cols=19 Identities=21% Similarity=0.305 Sum_probs=16.3
Q ss_pred hhHHHHHhhhCCChhHHHH
Q 016562 4 LEMESMAGSIGVSVAVLRF 22 (387)
Q Consensus 4 ~~~~~~~~~~g~~~d~~~~ 22 (387)
...+.||..+|++++++..
T Consensus 28 ~~~~~la~~l~l~~~~V~~ 46 (57)
T PF00046_consen 28 EEREELAKELGLTERQVKN 46 (57)
T ss_dssp HHHHHHHHHHTSSHHHHHH
T ss_pred ccccccccccccccccccc
Confidence 5678999999999999864
No 20
>PF07256 DUF1435: Protein of unknown function (DUF1435); InterPro: IPR009885 This family consists of several hypothetical Enterobacterial proteins of around 80 residues in length. The function of this family is unknown.
Probab=23.05 E-value=3.3e+02 Score=20.47 Aligned_cols=46 Identities=13% Similarity=0.174 Sum_probs=31.5
Q ss_pred HHHHhhhCCChhHHHHHHHHHHHHHHHHHhhcCCCcchhHHHHHHHHHHH
Q 016562 7 ESMAGSIGVSVAVLRFLLCYVATIPVSFLWRFVPSRTGKHVYAAASGALL 56 (387)
Q Consensus 7 ~~~~~~~g~~~d~~~~l~~ll~~~p~~~i~r~l~~~~~r~~~~~~~G~~~ 56 (387)
-++-...+.+.||.|.++....=.-.+-++++ +.||+..+-.++.+
T Consensus 19 ~~~l~~~~ls~~~~r~~iv~amL~T~~MLfh~----rlRH~lLLPSc~AL 64 (78)
T PF07256_consen 19 IPLLALANLSFDQWRIVIVVAMLLTLAMLFHR----RLRHFLLLPSCVAL 64 (78)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhH----hhhHHHHHHHHHHH
Confidence 34445578999999998866544444555554 68998877666654
No 21
>COG1108 ZnuB ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]
Probab=21.92 E-value=4.8e+02 Score=24.62 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=26.3
Q ss_pred HHHHhhhCCChhHHHHHHHHHHHHHHHHHhhc
Q 016562 7 ESMAGSIGVSVAVLRFLLCYVATIPVSFLWRF 38 (387)
Q Consensus 7 ~~~~~~~g~~~d~~~~l~~ll~~~p~~~i~r~ 38 (387)
++.|+..|+|++-+++++..+.++-....++-
T Consensus 164 ~~~A~~~Gl~v~~~~~l~~~lisl~iv~~~k~ 195 (274)
T COG1108 164 PEFARVLGLNVRLLHYLLLVLLALTIVAAIKA 195 (274)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999998887766666554
No 22
>PF06971 Put_DNA-bind_N: Putative DNA-binding protein N-terminus; InterPro: IPR009718 This entry represents the C terminus (approximately 30 residues) of a number of Rex proteins. These are redox-sensing repressors that appear to be widespread among Gram-positive bacteria []. They modulate transcription in response to changes in cellular NADH/NAD(+) redox state. Rex is predicted to include a pyridine nucleotide-binding domain (Rossmann fold), and residues that might play key structural and nucleotide binding roles are highly conserved.; GO: 0045892 negative regulation of transcription, DNA-dependent, 0051775 response to redox state, 0005737 cytoplasm; PDB: 3IL2_B 3IKT_A 3IKV_B 1XCB_F 2DT5_A 2VT3_A 2VT2_A 3KEO_B 3KET_A 3KEQ_A ....
Probab=21.05 E-value=75 Score=21.68 Aligned_cols=15 Identities=27% Similarity=0.601 Sum_probs=12.4
Q ss_pred HHHHhhhCCChhHHH
Q 016562 7 ESMAGSIGVSVAVLR 21 (387)
Q Consensus 7 ~~~~~~~g~~~d~~~ 21 (387)
+.||+.+|+++.|+|
T Consensus 32 ~~La~~~gi~~~qVR 46 (50)
T PF06971_consen 32 QELAEALGITPAQVR 46 (50)
T ss_dssp HHHHHHHTS-HHHHH
T ss_pred HHHHHHHCCCHHHhc
Confidence 468999999999997
No 23
>PF12085 DUF3562: Protein of unknown function (DUF3562); InterPro: IPR021945 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 62 to 84 amino acids in length. This protein has two completely conserved residues (A and Y) that may be functionally important.
Probab=20.72 E-value=92 Score=22.63 Aligned_cols=22 Identities=18% Similarity=0.215 Sum_probs=18.9
Q ss_pred hhHHHHHhhhCCChhHHHHHHH
Q 016562 4 LEMESMAGSIGVSVAVLRFLLC 25 (387)
Q Consensus 4 ~~~~~~~~~~g~~~d~~~~l~~ 25 (387)
..++++|+..|.|+|+++=+..
T Consensus 8 e~i~~iA~~t~~P~e~V~~my~ 29 (66)
T PF12085_consen 8 EVIRSIAEETGTPAETVRRMYD 29 (66)
T ss_pred HHHHHHHHHHCCCHHHHHHHHH
Confidence 6789999999999999987654
Done!