Query 016564
Match_columns 387
No_of_seqs 200 out of 1411
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 15:41:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 4.3E-82 1.5E-86 657.0 31.0 296 81-386 43-350 (550)
2 3khd_A Pyruvate kinase; malari 100.0 6.8E-81 2.3E-85 644.6 24.8 282 103-386 41-325 (520)
3 3hqn_D Pyruvate kinase, PK; TI 100.0 2E-80 6.8E-85 639.6 26.9 280 103-386 15-300 (499)
4 4drs_A Pyruvate kinase; glycol 100.0 1.1E-79 3.9E-84 637.8 31.0 283 102-386 38-331 (526)
5 3gg8_A Pyruvate kinase; malari 100.0 7.2E-80 2.5E-84 636.4 27.7 280 105-386 33-316 (511)
6 3t05_A Pyruvate kinase, PK; te 100.0 3E-79 1E-83 643.3 27.0 282 102-386 17-301 (606)
7 3qtg_A Pyruvate kinase, PK; TI 100.0 2.9E-79 1E-83 624.8 25.3 275 106-386 13-291 (461)
8 1e0t_A Pyruvate kinase, PK; ph 100.0 1.5E-78 5.1E-83 623.2 27.5 277 107-386 1-281 (470)
9 2e28_A Pyruvate kinase, PK; al 100.0 2.2E-77 7.5E-82 629.5 29.4 277 107-386 2-282 (587)
10 1a3w_A Pyruvate kinase; allost 100.0 8.9E-78 3E-82 621.8 20.8 280 105-386 16-301 (500)
11 1sgj_A Citrate lyase, beta sub 99.7 4.5E-17 1.5E-21 157.2 7.3 110 272-384 76-194 (284)
12 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 7.2E-17 2.5E-21 156.7 7.9 104 277-380 99-237 (287)
13 2vws_A YFAU, 2-keto-3-deoxy su 99.7 8.7E-17 3E-21 154.3 7.9 102 278-379 79-215 (267)
14 3qz6_A HPCH/HPAI aldolase; str 99.6 2.4E-16 8.3E-21 151.0 9.2 101 280-380 79-214 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.6 3.8E-16 1.3E-20 148.8 9.6 103 277-379 79-215 (256)
16 1izc_A Macrophomate synthase i 99.6 8.3E-16 2.8E-20 152.5 7.7 100 280-379 108-252 (339)
17 3qll_A Citrate lyase; beta bar 99.4 1.1E-13 3.7E-18 136.1 7.3 109 275-385 113-230 (316)
18 3qqw_A Putative citrate lyase; 99.4 2.6E-13 9.1E-18 134.1 7.5 109 275-385 94-228 (332)
19 1u5h_A CITE; TIM barrel, struc 99.4 5.6E-13 1.9E-17 128.2 7.1 100 276-385 71-183 (273)
20 3r4i_A Citrate lyase; TIM beta 99.3 2.3E-12 7.9E-17 127.8 9.2 109 275-385 93-227 (339)
21 2xz9_A Phosphoenolpyruvate-pro 99.3 3.4E-12 1.2E-16 125.9 6.6 109 271-379 117-252 (324)
22 3oyz_A Malate synthase; TIM ba 99.2 1E-11 3.6E-16 126.1 6.2 109 275-385 94-233 (433)
23 2ols_A Phosphoenolpyruvate syn 99.0 1.8E-10 6E-15 125.6 6.6 106 274-379 622-751 (794)
24 2hwg_A Phosphoenolpyruvate-pro 98.9 9.3E-10 3.2E-14 115.9 6.8 106 274-379 369-501 (575)
25 2wqd_A Phosphoenolpyruvate-pro 98.9 1E-09 3.5E-14 115.6 6.5 102 278-379 375-503 (572)
26 3cuz_A MSA, malate synthase A; 98.4 4.6E-07 1.6E-11 94.5 8.9 106 277-384 193-330 (532)
27 3cux_A Malate synthase; TIM ba 98.4 4.2E-07 1.4E-11 94.7 7.6 101 282-385 195-328 (528)
28 1vbg_A Pyruvate,orthophosphate 98.3 3.6E-07 1.2E-11 100.4 6.2 91 289-379 701-835 (876)
29 1kbl_A PPDK, pyruvate phosphat 98.2 9.1E-07 3.1E-11 97.2 6.3 91 289-379 695-829 (873)
30 1p7t_A MSG, malate synthase G; 98.2 1E-06 3.4E-11 94.0 5.3 106 278-385 371-510 (731)
31 1h6z_A Pyruvate phosphate diki 97.0 0.0021 7.1E-08 71.0 10.2 110 270-379 698-855 (913)
32 1jqo_A Phosphoenolpyruvate car 96.3 0.0041 1.4E-07 68.9 6.3 103 279-381 515-639 (970)
33 3odm_A Pepcase, PEPC, phosphoe 95.8 0.01 3.6E-07 61.8 6.2 92 289-380 139-260 (560)
34 1jqn_A Pepcase, PEPC, phosphoe 95.4 0.016 5.4E-07 63.8 5.9 93 289-381 468-579 (883)
35 2x0s_A Pyruvate phosphate diki 95.2 0.027 9.2E-07 62.4 7.2 60 292-351 727-796 (913)
36 2qjg_A Putative aldolase MJ040 89.7 3.4 0.00012 38.2 12.0 89 275-372 164-259 (273)
37 4g9p_A 4-hydroxy-3-methylbut-2 84.8 2 6.9E-05 43.3 7.6 95 279-377 41-140 (406)
38 4fxs_A Inosine-5'-monophosphat 73.6 5.4 0.00018 40.9 6.7 51 109-159 219-269 (496)
39 3i65_A Dihydroorotate dehydrog 71.7 14 0.00048 37.2 9.1 101 272-376 278-402 (415)
40 2k8i_A SLYD, peptidyl-prolyl C 70.2 16 0.00055 32.1 8.2 59 189-247 51-118 (171)
41 1at0_A 17-hedgehog; developmen 68.7 15 0.00053 31.1 7.5 58 188-251 58-129 (145)
42 4fo4_A Inosine 5'-monophosphat 68.2 8.6 0.00029 38.0 6.6 47 112-158 99-145 (366)
43 1eep_A Inosine 5'-monophosphat 67.3 7.9 0.00027 38.2 6.2 51 109-159 141-191 (404)
44 3vnd_A TSA, tryptophan synthas 67.2 11 0.00036 35.7 6.8 91 278-378 34-152 (267)
45 2kfw_A FKBP-type peptidyl-prol 66.2 7.9 0.00027 35.0 5.4 59 189-247 51-118 (196)
46 1w8s_A FBP aldolase, fructose- 66.1 9.2 0.00032 35.7 6.1 75 276-353 158-238 (263)
47 1aj0_A DHPS, dihydropteroate s 65.3 20 0.00067 34.2 8.3 69 109-180 14-103 (282)
48 2v82_A 2-dehydro-3-deoxy-6-pho 65.1 24 0.00083 31.0 8.5 70 278-352 110-182 (212)
49 3usb_A Inosine-5'-monophosphat 64.4 9.6 0.00033 39.1 6.3 51 108-158 243-293 (511)
50 3khj_A Inosine-5-monophosphate 64.0 10 0.00034 37.3 6.1 45 112-158 98-142 (361)
51 3ndz_A Endoglucanase D; cellot 63.7 7.1 0.00024 37.6 4.9 54 121-177 43-106 (345)
52 1ypf_A GMP reductase; GUAC, pu 63.4 13 0.00044 35.8 6.7 69 279-351 160-244 (336)
53 3daq_A DHDPS, dihydrodipicolin 62.9 36 0.0012 32.1 9.6 97 280-380 27-134 (292)
54 3f4w_A Putative hexulose 6 pho 62.8 14 0.00047 32.5 6.3 66 281-348 69-136 (211)
55 3fkr_A L-2-keto-3-deoxyarabona 62.1 29 0.00098 33.1 8.9 99 280-381 33-144 (309)
56 2nzl_A Hydroxyacid oxidase 1; 61.8 14 0.00049 36.6 6.8 94 279-376 263-372 (392)
57 3icg_A Endoglucanase D; cellul 61.6 8 0.00027 39.4 5.1 52 122-177 47-109 (515)
58 1qpo_A Quinolinate acid phosph 61.1 14 0.00048 35.2 6.4 64 279-347 204-270 (284)
59 4avf_A Inosine-5'-monophosphat 60.8 12 0.00042 38.1 6.3 50 109-158 217-266 (490)
60 3cgm_A SLYD, peptidyl-prolyl C 60.4 42 0.0015 28.9 8.9 58 190-247 47-114 (158)
61 1jcn_A Inosine monophosphate d 60.4 11 0.00038 38.3 5.9 50 110-159 244-293 (514)
62 3b4u_A Dihydrodipicolinate syn 60.3 53 0.0018 30.9 10.3 99 279-380 27-139 (294)
63 3ffs_A Inosine-5-monophosphate 60.0 37 0.0013 33.9 9.5 93 279-377 146-249 (400)
64 3zwt_A Dihydroorotate dehydrog 59.9 40 0.0014 33.1 9.6 99 273-376 230-355 (367)
65 2qr6_A IMP dehydrogenase/GMP r 59.8 23 0.00078 34.7 7.9 71 279-351 222-311 (393)
66 4fo4_A Inosine 5'-monophosphat 59.5 91 0.0031 30.6 12.1 98 276-377 107-214 (366)
67 1yad_A Regulatory protein TENI 58.4 52 0.0018 29.0 9.4 85 279-373 120-215 (221)
68 3qze_A DHDPS, dihydrodipicolin 58.3 34 0.0012 32.7 8.7 98 280-381 48-156 (314)
69 1ydn_A Hydroxymethylglutaryl-C 58.0 24 0.00081 33.1 7.4 100 274-377 23-136 (295)
70 1h5y_A HISF; histidine biosynt 57.8 33 0.0011 30.2 8.0 84 279-377 157-251 (253)
71 1tvn_A Cellulase, endoglucanas 57.4 20 0.00069 33.0 6.7 53 121-176 39-101 (293)
72 4dt4_A FKBP-type 16 kDa peptid 57.1 44 0.0015 29.3 8.5 59 190-248 75-143 (169)
73 4af0_A Inosine-5'-monophosphat 56.8 10 0.00035 39.7 4.8 52 108-159 268-319 (556)
74 4af0_A Inosine-5'-monophosphat 56.4 82 0.0028 32.9 11.5 100 274-377 278-387 (556)
75 1vc4_A Indole-3-glycerol phosp 56.0 21 0.00073 33.1 6.6 68 277-348 162-238 (254)
76 1gox_A (S)-2-hydroxy-acid oxid 55.9 20 0.00068 35.1 6.6 96 279-376 236-345 (370)
77 3m5v_A DHDPS, dihydrodipicolin 55.9 86 0.0029 29.5 11.0 97 280-380 32-140 (301)
78 1edg_A Endoglucanase A; family 55.9 10 0.00035 36.7 4.5 54 121-177 62-124 (380)
79 2kr7_A FKBP-type peptidyl-prol 55.8 49 0.0017 28.2 8.4 59 190-248 57-124 (151)
80 3s5o_A 4-hydroxy-2-oxoglutarat 55.4 60 0.0021 30.8 9.8 97 280-379 39-147 (307)
81 3nbm_A PTS system, lactose-spe 55.3 7.8 0.00027 31.7 3.0 65 303-382 22-86 (108)
82 3l21_A DHDPS, dihydrodipicolin 55.3 74 0.0025 30.1 10.4 97 280-380 40-147 (304)
83 3ctl_A D-allulose-6-phosphate 55.0 24 0.00081 32.4 6.6 62 281-345 72-134 (231)
84 3tsm_A IGPS, indole-3-glycerol 54.7 21 0.00073 33.7 6.4 67 278-348 178-251 (272)
85 2b7n_A Probable nicotinate-nuc 54.4 33 0.0011 32.2 7.7 64 279-347 192-258 (273)
86 1o4u_A Type II quinolic acid p 54.3 23 0.00078 33.9 6.6 65 278-347 202-269 (285)
87 1rd5_A Tryptophan synthase alp 54.2 43 0.0015 30.6 8.4 90 277-377 33-146 (262)
88 3kts_A Glycerol uptake operon 54.2 13 0.00043 33.7 4.5 89 277-386 17-111 (192)
89 2nli_A Lactate oxidase; flavoe 54.2 21 0.00072 35.0 6.5 91 279-376 240-349 (368)
90 3usb_A Inosine-5'-monophosphat 53.3 63 0.0022 33.0 10.2 99 275-377 254-362 (511)
91 1i8d_A Riboflavin synthase; ri 53.2 36 0.0012 31.3 7.4 54 210-265 24-85 (213)
92 3ayr_A Endoglucanase; TIM barr 53.0 14 0.00049 35.7 5.0 52 121-176 63-125 (376)
93 1kzl_A Riboflavin synthase; bi 52.4 23 0.0008 32.4 6.0 54 210-265 25-85 (208)
94 1vrd_A Inosine-5'-monophosphat 52.2 30 0.001 34.8 7.5 69 278-350 288-373 (494)
95 3qja_A IGPS, indole-3-glycerol 51.8 19 0.00064 34.0 5.5 70 277-348 170-244 (272)
96 3kws_A Putative sugar isomeras 51.8 52 0.0018 29.7 8.5 99 280-378 42-163 (287)
97 1egz_A Endoglucanase Z, EGZ, C 51.7 21 0.00071 32.8 5.7 53 121-176 39-99 (291)
98 1x1o_A Nicotinate-nucleotide p 51.7 33 0.0011 32.7 7.2 65 277-347 204-269 (286)
99 2v9d_A YAGE; dihydrodipicolini 51.7 87 0.003 30.3 10.4 97 280-380 56-163 (343)
100 3dz1_A Dihydrodipicolinate syn 51.6 74 0.0025 30.2 9.8 95 280-380 33-140 (313)
101 3ddy_A Lumazine protein, LUMP; 51.5 45 0.0015 29.9 7.7 55 208-265 22-84 (186)
102 3cu2_A Ribulose-5-phosphate 3- 50.9 17 0.00059 33.6 5.0 64 279-345 82-154 (237)
103 3l55_A B-1,4-endoglucanase/cel 50.5 27 0.00094 33.8 6.6 53 121-177 53-114 (353)
104 1f76_A Dihydroorotate dehydrog 49.9 39 0.0013 32.1 7.5 71 274-350 222-322 (336)
105 2r8w_A AGR_C_1641P; APC7498, d 49.8 1.6E+02 0.0054 28.2 11.9 98 280-381 59-167 (332)
106 1xg4_A Probable methylisocitra 49.8 38 0.0013 32.4 7.3 66 279-349 170-238 (295)
107 2ehh_A DHDPS, dihydrodipicolin 49.2 1.7E+02 0.0058 27.3 12.0 98 280-381 25-133 (294)
108 1vzw_A Phosphoribosyl isomeras 49.0 21 0.00071 32.1 5.2 66 280-351 36-109 (244)
109 2yci_X 5-methyltetrahydrofolat 49.0 19 0.00066 33.9 5.1 55 123-180 37-91 (271)
110 1h1n_A Endo type cellulase ENG 48.5 11 0.00036 35.4 3.2 52 122-177 33-95 (305)
111 3hgj_A Chromate reductase; TIM 48.5 65 0.0022 31.0 9.0 65 281-351 244-323 (349)
112 3ovp_A Ribulose-phosphate 3-ep 48.4 16 0.00055 33.4 4.4 62 281-345 79-140 (228)
113 3si9_A DHDPS, dihydrodipicolin 48.4 93 0.0032 29.7 9.9 98 280-381 47-155 (315)
114 2wkj_A N-acetylneuraminate lya 48.2 1.1E+02 0.0037 28.9 10.3 98 279-380 35-144 (303)
115 1f6k_A N-acetylneuraminate lya 48.2 67 0.0023 30.1 8.8 98 279-380 27-136 (293)
116 3na8_A Putative dihydrodipicol 47.9 1E+02 0.0035 29.3 10.2 98 280-381 49-157 (315)
117 2yxg_A DHDPS, dihydrodipicolin 47.3 1.7E+02 0.0057 27.3 11.4 97 280-380 25-132 (289)
118 2vef_A Dihydropteroate synthas 47.3 49 0.0017 31.9 7.7 69 108-179 8-97 (314)
119 2c6q_A GMP reductase 2; TIM ba 46.8 75 0.0026 30.8 9.1 70 278-351 171-257 (351)
120 3qfe_A Putative dihydrodipicol 46.7 74 0.0025 30.4 9.0 99 280-381 36-146 (318)
121 3ffs_A Inosine-5-monophosphate 46.6 18 0.00062 36.1 4.7 43 114-158 139-181 (400)
122 3flu_A DHDPS, dihydrodipicolin 46.6 1.6E+02 0.0054 27.6 11.2 97 280-380 32-139 (297)
123 1tv5_A Dhodehase, dihydroorota 46.2 34 0.0012 34.6 6.7 99 274-376 308-430 (443)
124 3inp_A D-ribulose-phosphate 3- 46.1 36 0.0012 31.7 6.4 64 280-346 100-163 (246)
125 1eep_A Inosine 5'-monophosphat 45.9 43 0.0015 32.8 7.3 70 278-351 204-290 (404)
126 1vrd_A Inosine-5'-monophosphat 45.9 25 0.00084 35.5 5.7 48 112-159 228-275 (494)
127 1xky_A Dihydrodipicolinate syn 45.8 1.5E+02 0.0051 27.9 10.9 97 280-380 37-144 (301)
128 3lmz_A Putative sugar isomeras 45.7 1.2E+02 0.004 26.9 9.7 88 279-378 33-130 (257)
129 3cpr_A Dihydrodipicolinate syn 45.7 2E+02 0.0067 27.1 12.3 97 280-380 41-148 (304)
130 3tak_A DHDPS, dihydrodipicolin 45.0 94 0.0032 29.1 9.3 97 280-380 26-133 (291)
131 1to3_A Putative aldolase YIHT; 44.9 87 0.003 29.8 9.1 76 282-357 183-265 (304)
132 1grj_A GREA protein; transcrip 44.9 4.3 0.00015 35.4 -0.2 129 70-242 4-156 (158)
133 1tqj_A Ribulose-phosphate 3-ep 44.6 40 0.0014 30.5 6.4 66 281-349 77-144 (230)
134 1tx2_A DHPS, dihydropteroate s 44.3 56 0.0019 31.3 7.6 70 108-180 38-128 (297)
135 4fxs_A Inosine-5'-monophosphat 44.2 83 0.0028 32.0 9.3 98 275-377 229-337 (496)
136 2rfg_A Dihydrodipicolinate syn 44.2 1.5E+02 0.0052 27.8 10.6 98 280-381 25-133 (297)
137 2z6i_A Trans-2-enoyl-ACP reduc 44.1 87 0.003 29.7 9.0 58 279-345 78-136 (332)
138 3sgz_A Hydroxyacid oxidase 2; 43.5 59 0.002 31.9 7.8 96 279-376 228-337 (352)
139 1geq_A Tryptophan synthase alp 43.2 57 0.002 29.2 7.2 63 279-344 98-160 (248)
140 2jbm_A Nicotinate-nucleotide p 43.0 55 0.0019 31.2 7.3 64 279-347 207-273 (299)
141 4dpp_A DHDPS 2, dihydrodipicol 42.9 63 0.0021 31.8 7.9 69 280-348 84-163 (360)
142 3khj_A Inosine-5-monophosphate 42.7 1.6E+02 0.0055 28.6 10.8 93 279-377 107-210 (361)
143 1xi3_A Thiamine phosphate pyro 42.6 1.1E+02 0.0039 26.2 8.9 49 122-173 28-76 (215)
144 2d73_A Alpha-glucosidase SUSB; 42.4 97 0.0033 33.5 9.7 100 275-377 370-504 (738)
145 3o63_A Probable thiamine-phosp 42.2 52 0.0018 30.3 6.8 93 274-374 140-243 (243)
146 2vc6_A MOSA, dihydrodipicolina 42.1 1.7E+02 0.0059 27.2 10.6 96 280-379 25-131 (292)
147 1mdl_A Mandelate racemase; iso 42.0 57 0.0019 31.2 7.3 62 109-176 133-198 (359)
148 3ijd_A Uncharacterized protein 42.0 32 0.0011 33.3 5.5 96 277-378 166-278 (315)
149 3e96_A Dihydrodipicolinate syn 41.6 81 0.0028 30.0 8.3 97 280-380 37-143 (316)
150 1vhk_A Hypothetical protein YQ 41.4 1.4E+02 0.0049 27.8 9.8 74 220-297 36-114 (268)
151 3nav_A Tryptophan synthase alp 41.3 54 0.0018 30.9 6.9 90 278-377 36-153 (271)
152 2jep_A Xyloglucanase; family 5 41.2 26 0.00089 33.8 4.8 54 121-177 70-133 (395)
153 1jub_A Dihydroorotate dehydrog 41.1 82 0.0028 29.3 8.2 91 282-376 178-299 (311)
154 4avf_A Inosine-5'-monophosphat 40.9 1.2E+02 0.004 30.8 9.8 98 275-377 227-335 (490)
155 3a5f_A Dihydrodipicolinate syn 40.4 93 0.0032 29.1 8.4 70 280-349 26-106 (291)
156 2cks_A Endoglucanase E-5; carb 40.2 49 0.0017 30.7 6.4 52 122-176 44-102 (306)
157 1eye_A DHPS 1, dihydropteroate 40.0 48 0.0016 31.4 6.3 54 123-180 32-93 (280)
158 3nco_A Endoglucanase fncel5A; 39.9 64 0.0022 29.9 7.2 52 122-177 43-105 (320)
159 3b0p_A TRNA-dihydrouridine syn 39.6 51 0.0018 31.8 6.6 67 280-350 148-229 (350)
160 1p0k_A Isopentenyl-diphosphate 39.0 77 0.0026 30.2 7.8 95 279-376 192-316 (349)
161 1ep3_A Dihydroorotate dehydrog 38.9 73 0.0025 29.4 7.4 89 280-376 180-297 (311)
162 3bw2_A 2-nitropropane dioxygen 38.9 1.3E+02 0.0046 28.8 9.5 60 279-347 112-174 (369)
163 3cqj_A L-ribulose-5-phosphate 38.6 71 0.0024 28.9 7.2 100 279-378 33-164 (295)
164 3tva_A Xylose isomerase domain 38.3 1.4E+02 0.0048 26.7 9.1 98 281-378 26-156 (290)
165 1o5k_A DHDPS, dihydrodipicolin 38.2 1E+02 0.0035 29.1 8.4 97 280-380 37-144 (306)
166 3eb2_A Putative dihydrodipicol 38.1 1E+02 0.0034 29.1 8.3 98 280-381 29-137 (300)
167 3a24_A Alpha-galactosidase; gl 38.0 50 0.0017 35.1 6.6 94 275-377 308-421 (641)
168 3ble_A Citramalate synthase fr 38.0 97 0.0033 29.8 8.3 102 273-377 37-153 (337)
169 2tps_A Protein (thiamin phosph 37.9 61 0.0021 28.4 6.4 93 274-373 121-223 (227)
170 1vyr_A Pentaerythritol tetrani 37.9 66 0.0022 31.3 7.1 63 282-351 257-328 (364)
171 1vhc_A Putative KHG/KDPG aldol 37.8 1.5E+02 0.0051 26.8 9.1 81 279-377 32-113 (224)
172 1ceo_A Cellulase CELC; glycosy 37.8 53 0.0018 30.7 6.3 22 121-142 29-50 (343)
173 3bo9_A Putative nitroalkan dio 37.6 1.7E+02 0.0058 27.7 9.9 58 279-345 92-150 (326)
174 3d0c_A Dihydrodipicolinate syn 37.6 61 0.0021 30.9 6.7 96 280-379 37-142 (314)
175 3r2g_A Inosine 5'-monophosphat 37.5 60 0.0021 31.9 6.8 67 276-346 99-169 (361)
176 1thf_D HISF protein; thermophI 37.3 59 0.002 29.1 6.3 67 280-351 34-108 (253)
177 3p6l_A Sugar phosphate isomera 37.2 2.1E+02 0.0073 25.1 10.4 87 279-377 25-131 (262)
178 2hmc_A AGR_L_411P, dihydrodipi 37.2 1.1E+02 0.0037 29.7 8.5 96 280-380 51-157 (344)
179 1nsj_A PRAI, phosphoribosyl an 36.5 86 0.0029 28.1 7.2 68 278-346 11-83 (205)
180 3ngf_A AP endonuclease, family 36.4 1.2E+02 0.004 27.1 8.2 97 280-378 27-148 (269)
181 1gte_A Dihydropyrimidine dehyd 36.1 1.3E+02 0.0045 33.2 9.9 61 282-345 654-734 (1025)
182 2ovl_A Putative racemase; stru 36.1 62 0.0021 31.2 6.6 64 109-176 133-200 (371)
183 2kct_A Cytochrome C-type bioge 36.0 1.2E+02 0.0041 24.2 7.1 55 175-229 7-65 (94)
184 1i4n_A Indole-3-glycerol phosp 35.9 42 0.0015 31.3 5.1 69 277-348 158-232 (251)
185 1ypf_A GMP reductase; GUAC, pu 35.7 33 0.0011 33.0 4.5 47 113-159 98-146 (336)
186 1v5x_A PRA isomerase, phosphor 35.6 90 0.0031 27.9 7.2 68 278-346 10-82 (203)
187 3r2g_A Inosine 5'-monophosphat 35.4 33 0.0011 33.8 4.4 45 115-159 94-138 (361)
188 1g01_A Endoglucanase; alpha/be 35.1 45 0.0015 31.9 5.4 52 122-177 55-113 (364)
189 3ceu_A Thiamine phosphate pyro 34.9 1.1E+02 0.0037 26.9 7.6 74 275-351 94-177 (210)
190 1nu5_A Chloromuconate cycloiso 34.9 82 0.0028 30.2 7.2 49 124-176 148-197 (370)
191 3h5d_A DHDPS, dihydrodipicolin 34.9 2.5E+02 0.0087 26.5 10.6 98 279-380 31-140 (311)
192 3f4w_A Putative hexulose 6 pho 34.8 90 0.0031 27.0 7.0 64 279-350 117-191 (211)
193 3aof_A Endoglucanase; glycosyl 34.7 65 0.0022 29.6 6.3 51 122-176 35-96 (317)
194 2gdq_A YITF; mandelate racemas 34.6 1.1E+02 0.0037 29.7 8.1 49 124-176 145-193 (382)
195 1w8s_A FBP aldolase, fructose- 34.5 89 0.003 28.9 7.1 91 275-377 39-141 (263)
196 1ece_A Endocellulase E1; glyco 34.4 41 0.0014 31.6 4.9 21 123-143 47-67 (358)
197 2ojp_A DHDPS, dihydrodipicolin 34.0 88 0.003 29.3 7.1 97 280-380 26-133 (292)
198 4e8b_A Ribosomal RNA small sub 34.0 1.2E+02 0.004 28.0 7.8 75 220-298 33-112 (251)
199 1rvk_A Isomerase/lactonizing e 33.8 96 0.0033 29.8 7.5 49 124-176 155-209 (382)
200 1qop_A Tryptophan synthase alp 33.8 1.2E+02 0.0042 27.8 8.0 95 279-383 34-156 (268)
201 1wa3_A 2-keto-3-deoxy-6-phosph 33.7 1.6E+02 0.0053 25.4 8.3 67 279-351 114-183 (205)
202 2y88_A Phosphoribosyl isomeras 33.3 52 0.0018 29.3 5.2 66 280-351 35-108 (244)
203 1y0e_A Putative N-acetylmannos 33.3 91 0.0031 27.3 6.8 65 279-348 129-206 (223)
204 2whl_A Beta-mannanase, baman5; 33.1 38 0.0013 31.2 4.3 52 122-177 33-87 (294)
205 1kbi_A Cytochrome B2, L-LCR; f 33.0 97 0.0033 31.7 7.7 96 279-376 354-468 (511)
206 1ix5_A FKBP; ppiase, isomerase 32.7 30 0.001 29.5 3.3 57 189-247 64-128 (151)
207 2osx_A Endoglycoceramidase II; 32.5 99 0.0034 30.7 7.6 52 120-175 65-126 (481)
208 2q02_A Putative cytoplasmic pr 32.3 2.6E+02 0.0087 24.5 10.5 99 279-378 22-137 (272)
209 1me8_A Inosine-5'-monophosphat 32.3 82 0.0028 31.9 7.0 68 278-347 294-382 (503)
210 4a29_A Engineered retro-aldol 31.4 70 0.0024 30.2 5.8 64 277-347 161-234 (258)
211 3fst_A 5,10-methylenetetrahydr 31.3 55 0.0019 31.3 5.2 60 277-336 164-223 (304)
212 3apt_A Methylenetetrahydrofola 31.1 63 0.0021 30.9 5.6 62 277-338 161-222 (310)
213 3tqv_A Nicotinate-nucleotide p 31.1 1.4E+02 0.0048 28.5 8.0 62 277-346 206-270 (287)
214 3qr3_A Endoglucanase EG-II; TI 30.8 19 0.00066 34.8 1.9 53 122-178 45-108 (340)
215 3dx5_A Uncharacterized protein 30.5 1.9E+02 0.0065 25.7 8.6 99 280-378 19-140 (286)
216 1bqc_A Protein (beta-mannanase 30.0 69 0.0024 29.4 5.6 46 124-176 36-87 (302)
217 3pr9_A FKBP-type peptidyl-prol 30.0 74 0.0025 27.4 5.4 58 189-248 63-128 (157)
218 3kw2_A Probable R-RNA methyltr 30.0 1.2E+02 0.004 28.2 7.1 71 220-295 32-109 (257)
219 1tzz_A Hypothetical protein L1 29.8 95 0.0033 30.1 6.8 48 125-176 172-219 (392)
220 3vup_A Beta-1,4-mannanase; TIM 29.7 56 0.0019 29.1 4.8 19 123-141 45-63 (351)
221 1vhy_A Hypothetical protein HI 29.4 1.3E+02 0.0043 27.9 7.2 72 220-295 35-111 (257)
222 3glc_A Aldolase LSRF; TIM barr 29.3 69 0.0024 30.6 5.5 66 281-353 194-264 (295)
223 1jw9_B Molybdopterin biosynthe 29.2 1.2E+02 0.0041 27.5 7.0 66 304-382 87-152 (249)
224 1h1y_A D-ribulose-5-phosphate 29.2 1.4E+02 0.0047 26.5 7.3 87 279-379 22-118 (228)
225 2r14_A Morphinone reductase; H 29.0 88 0.003 30.6 6.4 66 280-352 259-334 (377)
226 3ovp_A Ribulose-phosphate 3-ep 29.0 1.1E+02 0.0038 27.7 6.7 86 280-379 21-117 (228)
227 3knb_A Titin; IG-like, titin, 28.9 1.5E+02 0.0052 22.2 6.6 73 184-256 11-89 (100)
228 7a3h_A Endoglucanase; hydrolas 28.9 69 0.0023 29.8 5.4 53 120-176 43-102 (303)
229 3noy_A 4-hydroxy-3-methylbut-2 28.9 2.8E+02 0.0095 27.4 9.8 85 279-377 49-136 (366)
230 3aty_A Tcoye, prostaglandin F2 28.8 61 0.0021 31.8 5.2 65 280-351 270-341 (379)
231 1wbh_A KHG/KDPG aldolase; lyas 28.8 2.6E+02 0.0089 24.9 9.1 81 279-377 31-112 (214)
232 3fij_A LIN1909 protein; 11172J 28.7 1.1E+02 0.0039 27.7 6.7 62 312-377 38-111 (254)
233 2e6f_A Dihydroorotate dehydrog 28.6 1.5E+02 0.0052 27.5 7.8 89 282-376 180-301 (314)
234 1vcf_A Isopentenyl-diphosphate 28.6 1.2E+02 0.0042 28.7 7.2 95 279-376 195-320 (332)
235 2aam_A Hypothetical protein TM 28.6 2.9E+02 0.0099 26.3 9.8 91 282-378 128-244 (309)
236 1tkk_A Similar to chloromucona 28.4 1.2E+02 0.004 29.0 7.1 49 124-176 146-194 (366)
237 1p4c_A L(+)-mandelate dehydrog 28.4 78 0.0027 30.9 5.9 89 279-376 236-343 (380)
238 3m47_A Orotidine 5'-phosphate 28.3 1.8E+02 0.006 26.3 7.9 50 281-330 83-132 (228)
239 3ajx_A 3-hexulose-6-phosphate 28.1 1.7E+02 0.0057 25.2 7.5 36 282-317 70-105 (207)
240 3s1x_A Probable transaldolase; 28.0 67 0.0023 29.6 5.0 64 283-352 119-194 (223)
241 3r8r_A Transaldolase; pentose 28.0 58 0.002 29.7 4.5 58 284-347 118-187 (212)
242 1h4p_A Glucan 1,3-beta-glucosi 28.0 61 0.0021 31.9 5.1 52 122-176 75-136 (408)
243 4e38_A Keto-hydroxyglutarate-a 28.0 1.1E+02 0.0036 28.2 6.4 87 292-384 36-135 (232)
244 3b8i_A PA4872 oxaloacetate dec 27.4 79 0.0027 30.1 5.5 56 278-339 170-226 (287)
245 3tha_A Tryptophan synthase alp 27.4 1.5E+02 0.005 27.7 7.3 91 281-377 108-202 (252)
246 3n9k_A Glucan 1,3-beta-glucosi 27.4 54 0.0019 32.4 4.6 51 122-175 75-134 (399)
247 4dwd_A Mandelate racemase/muco 27.4 1.9E+02 0.0064 28.3 8.5 65 108-176 124-200 (393)
248 3paj_A Nicotinate-nucleotide p 27.4 1.6E+02 0.0056 28.5 7.8 61 279-347 241-304 (320)
249 1thf_D HISF protein; thermophI 27.4 1.5E+02 0.0051 26.4 7.2 87 279-377 154-248 (253)
250 2bti_A Carbon storage regulato 27.3 89 0.003 23.3 4.6 29 221-250 8-36 (63)
251 3w01_A Heptaprenylglyceryl pho 27.3 1.3E+02 0.0045 27.8 6.9 59 279-345 26-86 (235)
252 2qdd_A Mandelate racemase/muco 27.2 1.4E+02 0.0049 28.6 7.5 61 109-175 134-198 (378)
253 1qo2_A Molecule: N-((5-phospho 27.2 1.3E+02 0.0045 26.7 6.8 73 281-358 149-235 (241)
254 1h1y_A D-ribulose-5-phosphate 27.2 1.9E+02 0.0066 25.6 7.9 65 281-347 79-146 (228)
255 2y5s_A DHPS, dihydropteroate s 27.0 73 0.0025 30.4 5.2 53 123-179 49-109 (294)
256 1ccw_A Protein (glutamate muta 27.0 73 0.0025 26.3 4.7 41 281-321 46-89 (137)
257 1zco_A 2-dehydro-3-deoxyphosph 26.9 2.9E+02 0.0098 25.6 9.3 68 279-351 40-118 (262)
258 3s9z_A Malate synthase G; inhi 26.8 99 0.0034 33.3 6.5 51 290-340 392-449 (741)
259 1dxe_A 2-dehydro-3-deoxy-galac 26.7 1.8E+02 0.006 26.6 7.7 67 278-345 29-97 (256)
260 3h8v_A Ubiquitin-like modifier 26.6 1.1E+02 0.0039 28.9 6.5 64 304-377 91-165 (292)
261 1vpz_A Carbon storage regulato 26.5 90 0.0031 24.0 4.6 31 217-248 14-44 (73)
262 1ka9_F Imidazole glycerol phos 26.4 1.1E+02 0.0039 27.1 6.3 68 279-351 34-109 (252)
263 1zud_1 Adenylyltransferase THI 26.4 1.8E+02 0.006 26.4 7.6 67 303-382 83-149 (251)
264 1vhn_A Putative flavin oxidore 26.4 24 0.00082 33.5 1.7 64 280-350 144-217 (318)
265 4dbe_A Orotidine 5'-phosphate 26.1 1.1E+02 0.0039 27.6 6.1 81 279-366 125-207 (222)
266 3vnd_A TSA, tryptophan synthas 26.1 1.9E+02 0.0064 27.0 7.8 63 280-345 114-176 (267)
267 1ydn_A Hydroxymethylglutaryl-C 26.0 2.4E+02 0.0081 26.1 8.6 29 109-141 72-100 (295)
268 1jcn_A Inosine monophosphate d 25.8 5.1E+02 0.017 25.9 12.2 93 277-377 255-361 (514)
269 3ih1_A Methylisocitrate lyase; 25.5 2.7E+02 0.0091 26.6 8.9 66 279-345 107-194 (305)
270 2oz8_A MLL7089 protein; struct 25.3 1.3E+02 0.0044 29.1 6.8 64 109-176 132-199 (389)
271 3jr2_A Hexulose-6-phosphate sy 25.3 1.4E+02 0.0048 26.3 6.6 63 282-347 76-140 (218)
272 2e6z_A Transcription elongatio 25.2 62 0.0021 23.3 3.4 45 220-267 7-54 (59)
273 1i60_A IOLI protein; beta barr 25.2 2.5E+02 0.0085 24.5 8.3 99 280-378 18-140 (278)
274 1ka9_F Imidazole glycerol phos 25.1 1.4E+02 0.0049 26.4 6.7 87 279-377 155-249 (252)
275 3l5l_A Xenobiotic reductase A; 25.1 1.3E+02 0.0046 29.0 6.9 65 281-351 251-330 (363)
276 3tr9_A Dihydropteroate synthas 25.0 69 0.0024 31.0 4.6 53 124-179 53-117 (314)
277 3iwp_A Copper homeostasis prot 24.9 1.6E+02 0.0054 28.2 7.1 77 279-356 114-196 (287)
278 2gjl_A Hypothetical protein PA 24.9 3.1E+02 0.01 25.6 9.3 59 279-345 86-144 (328)
279 3ldv_A Orotidine 5'-phosphate 24.8 1.1E+02 0.0037 28.6 5.8 69 283-359 169-247 (255)
280 1z41_A YQJM, probable NADH-dep 24.7 1.8E+02 0.0063 27.6 7.7 66 280-351 233-312 (338)
281 2yxb_A Coenzyme B12-dependent 24.7 1.1E+02 0.0038 26.0 5.5 41 281-321 61-104 (161)
282 1vjz_A Endoglucanase; TM1752, 24.6 78 0.0027 29.6 4.9 23 120-142 36-58 (341)
283 2z0t_A Putative uncharacterize 24.4 56 0.0019 26.8 3.4 25 217-241 30-54 (109)
284 3gr7_A NADPH dehydrogenase; fl 24.4 2.2E+02 0.0074 27.3 8.2 69 275-351 227-312 (340)
285 1z85_A Hypothetical protein TM 24.3 1.6E+02 0.0055 26.9 6.9 75 220-298 40-119 (234)
286 3jug_A Beta-mannanase; TIM-bar 24.3 60 0.0021 31.4 4.1 50 124-177 58-110 (345)
287 2c6q_A GMP reductase 2; TIM ba 24.2 77 0.0026 30.7 4.9 48 112-159 109-158 (351)
288 3l0g_A Nicotinate-nucleotide p 24.1 83 0.0028 30.3 5.0 69 278-354 216-294 (300)
289 1rpx_A Protein (ribulose-phosp 24.1 1.5E+02 0.005 26.2 6.5 62 279-345 26-97 (230)
290 2ftp_A Hydroxymethylglutaryl-C 23.8 1.5E+02 0.0051 27.8 6.8 100 274-377 27-140 (302)
291 2og9_A Mandelate racemase/muco 23.7 1.4E+02 0.0046 29.0 6.6 64 109-176 148-216 (393)
292 3ve9_A Orotidine-5'-phosphate 23.5 88 0.003 28.3 4.8 79 279-364 118-198 (215)
293 2gou_A Oxidoreductase, FMN-bin 23.3 1.3E+02 0.0043 29.3 6.3 62 281-351 255-327 (365)
294 3qc0_A Sugar isomerase; TIM ba 23.2 55 0.0019 29.0 3.4 100 279-378 21-140 (275)
295 2v5j_A 2,4-dihydroxyhept-2-ENE 23.1 2.1E+02 0.0071 26.9 7.6 67 278-345 49-117 (287)
296 2c0h_A Mannan endo-1,4-beta-ma 23.1 1.1E+02 0.0037 28.4 5.6 21 123-143 48-68 (353)
297 1zfj_A Inosine monophosphate d 23.1 2.2E+02 0.0074 28.3 8.2 65 278-348 284-367 (491)
298 3gnn_A Nicotinate-nucleotide p 23.1 2.3E+02 0.0078 27.1 7.9 62 278-347 218-282 (298)
299 3pzt_A Endoglucanase; alpha/be 23.0 92 0.0032 29.4 5.1 53 120-176 68-127 (327)
300 1wky_A Endo-beta-1,4-mannanase 23.0 70 0.0024 32.1 4.4 52 122-177 41-95 (464)
301 1icp_A OPR1, 12-oxophytodienoa 22.8 61 0.0021 31.7 3.9 64 280-352 260-336 (376)
302 3bdk_A D-mannonate dehydratase 22.8 1.5E+02 0.0053 29.1 6.8 64 276-339 30-112 (386)
303 4hci_A Cupredoxin 1; structura 22.7 90 0.0031 24.0 4.2 41 185-225 27-67 (100)
304 4e38_A Keto-hydroxyglutarate-a 22.6 1.7E+02 0.0057 26.9 6.6 46 109-157 33-80 (232)
305 1mxs_A KDPG aldolase; 2-keto-3 22.5 3.5E+02 0.012 24.3 8.7 85 279-383 41-126 (225)
306 2qgq_A Protein TM_1862; alpha- 22.5 1.8E+02 0.006 27.0 6.9 36 114-149 92-129 (304)
307 3tfx_A Orotidine 5'-phosphate 22.4 1.4E+02 0.0049 27.8 6.2 65 283-355 151-225 (259)
308 1y0e_A Putative N-acetylmannos 22.3 3.8E+02 0.013 23.1 9.5 67 278-347 77-147 (223)
309 3prb_A FKBP-type peptidyl-prol 22.0 1.5E+02 0.0051 27.3 6.1 58 189-248 63-128 (231)
310 3ozy_A Putative mandelate race 21.9 3.2E+02 0.011 26.4 8.9 61 110-176 139-204 (389)
311 1y8q_A Ubiquitin-like 1 activa 21.9 2.3E+02 0.008 27.1 7.8 66 303-382 91-156 (346)
312 3gka_A N-ethylmaleimide reduct 21.8 1.4E+02 0.0048 29.1 6.2 63 280-351 254-321 (361)
313 2jpp_A Translational repressor 21.7 1.3E+02 0.0044 22.9 4.6 29 221-250 6-34 (70)
314 3nav_A Tryptophan synthase alp 21.6 3E+02 0.01 25.6 8.3 62 280-344 116-177 (271)
315 1rh9_A Endo-beta-mannanase; en 21.6 2.1E+02 0.0071 26.8 7.4 18 123-140 45-62 (373)
316 1xm3_A Thiazole biosynthesis p 21.6 96 0.0033 28.6 4.8 63 278-348 136-209 (264)
317 1zzm_A Putative deoxyribonucle 21.5 4.1E+02 0.014 23.2 9.7 95 280-377 23-130 (259)
318 3lab_A Putative KDPG (2-keto-3 21.5 96 0.0033 28.4 4.7 12 364-375 96-107 (217)
319 2fli_A Ribulose-phosphate 3-ep 21.4 97 0.0033 27.0 4.6 62 281-345 76-137 (220)
320 4hty_A Cellulase; (alpha/beta) 21.4 1.3E+02 0.0044 28.6 5.8 54 121-177 86-144 (359)
321 3ctl_A D-allulose-6-phosphate 21.4 2.3E+02 0.0078 25.7 7.3 84 280-379 17-111 (231)
322 3sjn_A Mandelate racemase/muco 21.4 1.7E+02 0.0059 28.1 6.8 50 123-176 151-202 (374)
323 1uuq_A Mannosyl-oligosaccharid 20.9 1.8E+02 0.006 28.5 6.9 20 123-142 65-84 (440)
324 4ab4_A Xenobiotic reductase B; 20.9 1.5E+02 0.0051 28.9 6.2 63 280-351 246-313 (362)
325 3g0t_A Putative aminotransfera 20.7 1.3E+02 0.0045 28.4 5.7 49 112-161 374-435 (437)
326 3rz2_A Protein tyrosine phosph 20.3 3.9E+02 0.013 22.6 8.4 50 86-135 10-63 (189)
327 1pii_A N-(5'phosphoribosyl)ant 20.3 1.2E+02 0.0041 30.7 5.5 76 270-348 157-238 (452)
328 4h3d_A 3-dehydroquinate dehydr 20.3 1.7E+02 0.0057 27.1 6.2 75 107-181 137-218 (258)
329 4ef8_A Dihydroorotate dehydrog 20.2 3.2E+02 0.011 26.5 8.4 69 303-376 264-334 (354)
330 1v8a_A Hydroxyethylthiazole ki 20.1 90 0.0031 28.8 4.3 48 330-383 47-94 (265)
331 3oru_A DUF1989 family protein; 20.1 1.5E+02 0.0051 27.5 5.7 54 187-240 46-113 (234)
332 1xi3_A Thiamine phosphate pyro 20.1 2.9E+02 0.01 23.5 7.5 69 279-351 118-195 (215)
333 1vhc_A Putative KHG/KDPG aldol 20.0 1.4E+02 0.0048 27.0 5.5 54 280-346 80-137 (224)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=4.3e-82 Score=657.04 Aligned_cols=296 Identities=38% Similarity=0.607 Sum_probs=282.5
Q ss_pred ccccccccCccccccccccccCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHH
Q 016564 81 DGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYN 160 (387)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~ 160 (387)
+.+++|++.|. +.++|..+|||||||||||+|+++|+|++|+++||||||||||||++++|.++|+++|+++
T Consensus 43 ~~~l~~~~~l~--------~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~ 114 (550)
T 3gr4_A 43 DTFLEHMCRLD--------IDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTAT 114 (550)
T ss_dssp SSHHHHHHTCC--------TTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHH
T ss_pred ccHHHHhhccC--------CCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 44799999887 7788889999999999999999999999999999999999999999999999999999998
Q ss_pred Hhc-----CCCeeEEEEeCCCCeeeecCCCC----CeEecCCCEEEEEecCC---CCCccEEEeccCCcccccCcCCEEE
Q 016564 161 AQS-----KDNVIAIMLDTKGPEVRSGDLPQ----PITLTSGQEFTFTIQRG---VGSAECVSVNYDDFVNDVEVGDMLL 228 (387)
Q Consensus 161 ~~~-----~~~~i~I~lDL~GPkIRtG~l~~----~i~Lk~G~~v~lt~~~~---~g~~~~i~v~~~~l~~~v~~Gd~Il 228 (387)
++. .++||+|++||+|||||||.+.+ +++|++||+|+|+++.. .|+.+.++++|++|++++++||+||
T Consensus 115 ~~~~~~~~~~~~vaIllDlkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Il 194 (550)
T 3gr4_A 115 ESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIY 194 (550)
T ss_dssp HTTTTCTTTCCCCEEEEECCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEE
T ss_pred HhhccccccCceEEEEEeCCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEE
Confidence 872 35789999999999999999963 79999999999998753 5788899999999999999999999
Q ss_pred EeCCeEEEEEEEEeCCeEEEEEEECcEecCCcceeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHH
Q 016564 229 VDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELK 308 (387)
Q Consensus 229 iDDG~I~l~V~~v~~d~v~c~V~~gG~L~s~KgVn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~ 308 (387)
+|||+|.|+|++++++.+.|+|++||.|+++||||+||..+++|+||++|.+||+|++++|+|||++|||++++||++++
T Consensus 195 idDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r 274 (550)
T 3gr4_A 195 VDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVR 274 (550)
T ss_dssp ETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHH
T ss_pred EeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 309 NYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 309 ~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
++|.+.|.++.|||||||++|++||+||++++|||||||||||+|+|+++++.+||+|+++|+++|||+ |.|++.|
T Consensus 275 ~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpV--i~ATQML 350 (550)
T 3gr4_A 275 KVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPV--ICATQML 350 (550)
T ss_dssp HHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCE--EEESSTT
T ss_pred HHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCE--EEEehhh
Confidence 999998889999999999999999999999999999999999999999999999999999999999999 8888765
No 2
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.8e-81 Score=644.57 Aligned_cols=282 Identities=34% Similarity=0.576 Sum_probs=260.3
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeeec
Q 016564 103 KPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSG 182 (387)
Q Consensus 103 ~p~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRtG 182 (387)
++..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|+++++..+++|+|++||+|||||+|
T Consensus 41 ~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~~~vaIllDl~GPkIR~G 120 (520)
T 3khd_A 41 VNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPNCLLGMLLDTKGPEIRTG 120 (520)
T ss_dssp CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSSCCCEEEEECCCCCEEBC
T ss_pred CcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCeEEee
Confidence 45678999999999999999999999999999999999999999999999999999988445689999999999999999
Q ss_pred CCCC-CeEecCCCEEEEEec-CCCCCccEEEeccCCcccccCcCCEEEEeCCeEEEEEEEEeCCeEEEEEEECcEecCCc
Q 016564 183 DLPQ-PITLTSGQEFTFTIQ-RGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRR 260 (387)
Q Consensus 183 ~l~~-~i~Lk~G~~v~lt~~-~~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V~~gG~L~s~K 260 (387)
.+++ +.+|++||+|+||++ ...|+.+.++++|++|++++++||+||+|||+|.|+|++++++.+.|+|.+||.|+++|
T Consensus 121 ~~~~~~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~K 200 (520)
T 3khd_A 121 FLKNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGERK 200 (520)
T ss_dssp EEC-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEEEEECC-CCCCSSC
T ss_pred ccCCCCeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEECCEEEEEEEeCeEEeCCc
Confidence 9975 579999999999988 55688889999999999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCCCCCCCCCcccHHHH-HhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh
Q 016564 261 HLNVRGKSATLPSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA 339 (387)
Q Consensus 261 gVn~p~~~l~lp~LTe~D~~dI-~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~ 339 (387)
|||+||..+++|+||++|++|| +|++++|+|||++|||++++||.+++++|.+.|.++.|||||||++|++|++||+++
T Consensus 201 gvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~ 280 (520)
T 3khd_A 201 NMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAE 280 (520)
T ss_dssp EEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHH
T ss_pred eeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHh
Confidence 9999999999999999999999 999999999999999999999999999999988899999999999999999999999
Q ss_pred cCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 340 SDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 340 sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
+|||||||||||+|+|++++|.+||+||++|+++|||+ |.|++.|
T Consensus 281 sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPV--i~ATQML 325 (520)
T 3khd_A 281 SDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPI--ITATQML 325 (520)
T ss_dssp SSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCE--EECCCCC
T ss_pred CCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCe--EEeehhh
Confidence 99999999999999999999999999999999999999 8888865
No 3
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=2e-80 Score=639.56 Aligned_cols=280 Identities=37% Similarity=0.614 Sum_probs=269.3
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeeec
Q 016564 103 KPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSG 182 (387)
Q Consensus 103 ~p~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRtG 182 (387)
++..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++++ ++|++|++||+|||||||
T Consensus 15 ~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~-g~~vaIl~Dl~GPkIR~g 93 (499)
T 3hqn_D 15 PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAEL-GVNIAIALDTKGPEIRTG 93 (499)
T ss_dssp CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHH-TCCCEEEEECCCCCCBBC
T ss_pred CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHh-CCcEEEEEeCCCCEEeee
Confidence 6777999999999999999999999999999999999999999999999999999999887 588999999999999999
Q ss_pred CCCC--CeEecCCCEEEEEecC---CCCCccEEEeccCCcccccCcCCEEEEeCCeEEEEEEEEe-CCeEEEEEEECcEe
Q 016564 183 DLPQ--PITLTSGQEFTFTIQR---GVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKT-EDSVKCEVVDGGEL 256 (387)
Q Consensus 183 ~l~~--~i~Lk~G~~v~lt~~~---~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v~-~d~v~c~V~~gG~L 256 (387)
.+++ ++ |++||+|+||++. ..|+.+.++++|++|++++++||.||+|||+|.|+|.+++ ++.+.|+|.+||.|
T Consensus 94 ~~~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~i~~~v~~gG~L 172 (499)
T 3hqn_D 94 QFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHTI 172 (499)
T ss_dssp CBGGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETTEEEEEECSCEEE
T ss_pred ccCCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcCCCeEEEEEEeCcEe
Confidence 9975 47 9999999999873 4688899999999999999999999999999999999997 67899999999999
Q ss_pred cCCcceeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHH
Q 016564 257 KSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSI 336 (387)
Q Consensus 257 ~s~KgVn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eI 336 (387)
+++||||+||..+++|+||++|.+||+|++++|+|||++|||++++||++++++|.+.|.++.|||||||++|++||+||
T Consensus 173 ~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeI 252 (499)
T 3hqn_D 173 SDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSI 252 (499)
T ss_dssp ETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHH
T ss_pred eCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 337 ITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 337 l~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
++++|||||||||||+|+|+++++.+||+|+++|+++|||+ |.|++.|
T Consensus 253 l~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpV--i~ATQmL 300 (499)
T 3hqn_D 253 IEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPV--ICATQML 300 (499)
T ss_dssp HHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCE--EEESSSS
T ss_pred HHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCe--EEeehhH
Confidence 99999999999999999999999999999999999999999 8888765
No 4
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=1.1e-79 Score=637.76 Aligned_cols=283 Identities=37% Similarity=0.619 Sum_probs=267.7
Q ss_pred CCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeee
Q 016564 102 TKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRS 181 (387)
Q Consensus 102 ~~p~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRt 181 (387)
.....+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++...+++|+|++||+||||||
T Consensus 38 ~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GPkIR~ 117 (526)
T 4drs_A 38 DNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHSTVGIMLDTKGPEIRT 117 (526)
T ss_dssp ----CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCCCEEEEECCCSCCBB
T ss_pred cCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEECCCCeeEE
Confidence 44456899999999999999999999999999999999999999999999999999998755578999999999999999
Q ss_pred cCCCC--CeEecCCCEEEEEecC-CCCCccEEEeccCCcccccCcCCEEEEeCCeEEEEEEEEeCCeEEEEEEECcEecC
Q 016564 182 GDLPQ--PITLTSGQEFTFTIQR-GVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKS 258 (387)
Q Consensus 182 G~l~~--~i~Lk~G~~v~lt~~~-~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V~~gG~L~s 258 (387)
|.+++ +++|++||+|+|+++. ..|+.+.++++|+++++++++||.||+|||+|.|+|.+++++.+.|+|.+||.|++
T Consensus 118 g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~ 197 (526)
T 4drs_A 118 GMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIGE 197 (526)
T ss_dssp CCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEECSSEEEEECCSCCEECS
T ss_pred EecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEeCCeEEEEeccCccccc
Confidence 99974 6999999999999874 45888999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeCCCCCCCCCCCcccHHH-HHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCC-------CceEEEecCChhhh
Q 016564 259 RRHLNVRGKSATLPSITEKDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-------DIHVIVKIESADSI 330 (387)
Q Consensus 259 ~KgVn~p~~~l~lp~LTe~D~~d-I~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~-------~i~IIAKIEt~~gv 330 (387)
+||||+||..+++|+||++|.+| |+|++++|+|||++|||++++||.++|++|.+.|. +++||||||+++|+
T Consensus 198 ~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av 277 (526)
T 4drs_A 198 RKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGV 277 (526)
T ss_dssp SCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHH
T ss_pred cccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHH
Confidence 99999999999999999999998 68999999999999999999999999999998763 68999999999999
Q ss_pred hcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 331 PNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 331 ~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
+||+||++++|||||||||||+|+|+|++|.+||+||++|+++|||+ |.|++.|
T Consensus 278 ~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPV--I~ATQmL 331 (526)
T 4drs_A 278 INFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPV--VTATQML 331 (526)
T ss_dssp HTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCE--EEESCTT
T ss_pred HHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeE--EEhhhhh
Confidence 99999999999999999999999999999999999999999999999 9999876
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=7.2e-80 Score=636.39 Aligned_cols=280 Identities=35% Similarity=0.588 Sum_probs=268.6
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeeecCC
Q 016564 105 TVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDL 184 (387)
Q Consensus 105 ~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRtG~l 184 (387)
..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++++.+++|+|++||+|||||||.+
T Consensus 33 ~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GPkIR~g~~ 112 (511)
T 3gg8_A 33 WTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARLAILLDTKGPEIRTGFL 112 (511)
T ss_dssp HTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTTCCCEEEEECCCCCCBBCC-
T ss_pred cccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEECCCCEEecccC
Confidence 35799999999999999999999999999999999999999999999999999999887468999999999999999999
Q ss_pred CC--CeEecCCCEEEEEec-CCCCCccEEEeccCCcccccCcCCEEEEeCCeEEEEEEEEeCCeEEEEEEECcEecCCcc
Q 016564 185 PQ--PITLTSGQEFTFTIQ-RGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRH 261 (387)
Q Consensus 185 ~~--~i~Lk~G~~v~lt~~-~~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V~~gG~L~s~Kg 261 (387)
.+ +++|++||+|+||++ ...|+.+.++++|++|++++++||.||+|||+|.|+|.+++++.+.|+|.+||.|+++||
T Consensus 113 ~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~Kg 192 (511)
T 3gg8_A 113 KDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKN 192 (511)
T ss_dssp ----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEESSCEEECSSCB
T ss_pred CCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCEEEEEEEeCeEEcCCcc
Confidence 75 799999999999998 566888999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCCCCCCCcccHHHH-HhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhc
Q 016564 262 LNVRGKSATLPSITEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITAS 340 (387)
Q Consensus 262 Vn~p~~~l~lp~LTe~D~~dI-~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~s 340 (387)
||+||..+++|+||++|++|| +|++++|+|||++|||++++||++++++|.+.|.++.|||||||++|++||+||++++
T Consensus 193 vNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~s 272 (511)
T 3gg8_A 193 MNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEA 272 (511)
T ss_dssp EECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHC
T ss_pred eecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999888999999999999999999999999
Q ss_pred CeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 341 DGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 341 DGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
|||||||||||+|+|+++++.+||+|+++|+++|||+ |.+++.|
T Consensus 273 DgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpv--i~ATQmL 316 (511)
T 3gg8_A 273 DGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPV--ITATQML 316 (511)
T ss_dssp SCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCE--EEESSSS
T ss_pred CeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCe--EEehHHH
Confidence 9999999999999999999999999999999999999 8888865
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=3e-79 Score=643.35 Aligned_cols=282 Identities=43% Similarity=0.733 Sum_probs=269.3
Q ss_pred CCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeee
Q 016564 102 TKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRS 181 (387)
Q Consensus 102 ~~p~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRt 181 (387)
.-|..+|||||||||||+|+++|+|++|+++|||+||||||||++++|+++|+++|++++++ +++|+|++||+||||||
T Consensus 17 ~~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~-~~~vail~Dl~GPkiR~ 95 (606)
T 3t05_A 17 RGSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRL-DKIVAILLDTKGPEIRT 95 (606)
T ss_dssp -----CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHT-TCCCEEEEECCCCCCBB
T ss_pred CCcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCEEEe
Confidence 34555899999999999999999999999999999999999999999999999999999876 58899999999999999
Q ss_pred cCCCC-CeEecCCCEEEEEecCCCCCccEEEeccCCcccccCcCCEEEEeCCeEEEEE--EEEeCCeEEEEEEECcEecC
Q 016564 182 GDLPQ-PITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLV--KSKTEDSVKCEVVDGGELKS 258 (387)
Q Consensus 182 G~l~~-~i~Lk~G~~v~lt~~~~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V--~~v~~d~v~c~V~~gG~L~s 258 (387)
|.+++ +++|++||+|+||.+...|+.+.++++|++|++++++||+||+|||+|.|+| ++++++.+.|+|.+||.|++
T Consensus 96 g~~~~~~i~L~~G~~~~lt~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~L~~ 175 (606)
T 3t05_A 96 HNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKN 175 (606)
T ss_dssp CCBTTSEEECCSSCEEEEESSCCCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCEEET
T ss_pred ecCCCCCEEEcCCCEEEEEecCcCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeEEeC
Confidence 99974 7999999999999988788899999999999999999999999999999999 77899999999999999999
Q ss_pred CcceeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHh
Q 016564 259 RRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (387)
Q Consensus 259 ~KgVn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~ 338 (387)
+||||+||..+++|+||++|++||+|++++|+|||++|||++++||++++++|.+.|.++.|||||||++|++||+||++
T Consensus 176 ~KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~ 255 (606)
T 3t05_A 176 KKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILE 255 (606)
T ss_dssp TCBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHH
T ss_pred CceEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 339 ASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 339 ~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
++|||||||||||+|+|++++|.+||+|+++|+++|||+ |.+++.|
T Consensus 256 ~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpv--i~ATQML 301 (606)
T 3t05_A 256 VSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPV--ITATQML 301 (606)
T ss_dssp HCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCE--EEESSSS
T ss_pred hCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCe--EEehHHH
Confidence 999999999999999999999999999999999999999 8888765
No 7
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.9e-79 Score=624.78 Aligned_cols=275 Identities=26% Similarity=0.446 Sum_probs=266.4
Q ss_pred CCCCceEEEecCCCCCCHH--HHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeeecC
Q 016564 106 VRRKTKIVCTIGPSTNTRE--MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGD 183 (387)
Q Consensus 106 ~~r~TKII~TIGPss~~~e--~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRtG~ 183 (387)
.+|+|||||||||+|+++| +|++|+++ |||||||||||++++|+++|+++|++++++ +++++|++||+|||||||.
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~-g~~vaIl~Dl~GPkIR~g~ 90 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAK-NRPLAVIVDLKGPSIRVGS 90 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEECCCCCCBCCB
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHc-CCceEEEEeCCCCEEEECC
Confidence 4799999999999999988 99999999 999999999999999999999999999877 5889999999999999999
Q ss_pred CCCCeEecCCCEEEEEecCCCCCccEEEeccCCcccccCcCCEEEEeCCeEEEEEEEEeCCeEEEEEEECcEecCCccee
Q 016564 184 LPQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLN 263 (387)
Q Consensus 184 l~~~i~Lk~G~~v~lt~~~~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V~~gG~L~s~KgVn 263 (387)
+. +++|++||+|+|+++...++ +.++++|++|++++++||.||+|||+|.|+|++++++.+.|+|.+||.|+++||||
T Consensus 91 ~~-~v~L~~G~~~~lt~~~~~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~KgvN 168 (461)
T 3qtg_A 91 TS-PINVQEGEVVKFKLSDKSDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIEAVAESSGVITGGKAIV 168 (461)
T ss_dssp CS-CEEECTTCEEEEEECSBCCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECSSEEEEEESSCEEECTTCBEE
T ss_pred CC-CEEEeCCCEEEEEecCCCCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEECCEEEEEEEECCEecCCCcee
Confidence 95 69999999999999877777 88999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCcccHHHHH--hhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcC
Q 016564 264 VRGKSATLPSITEKDWDDIK--FGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASD 341 (387)
Q Consensus 264 ~p~~~l~lp~LTe~D~~dI~--~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sD 341 (387)
+||..+++|+||++|.+||+ |++++|+|||++|||++++||++++++|.+.|.++.|||||||++|++|++||++++|
T Consensus 169 lPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sD 248 (461)
T 3qtg_A 169 VEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSD 248 (461)
T ss_dssp ETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCS
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcc
Confidence 99999999999999999999 9999999999999999999999999999999989999999999999999999999999
Q ss_pred eEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 342 GAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 342 GImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
||||||||||+|+|+++++.+||+|+++|+++|||+ |.+++.|
T Consensus 249 gImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpv--i~ATQML 291 (461)
T 3qtg_A 249 YVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPI--AVATQLL 291 (461)
T ss_dssp EEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCE--EEESSSS
T ss_pred cEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCE--EEeccch
Confidence 999999999999999999999999999999999999 8888765
No 8
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=1.5e-78 Score=623.16 Aligned_cols=277 Identities=43% Similarity=0.722 Sum_probs=266.9
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeeecCCC-
Q 016564 107 RRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLP- 185 (387)
Q Consensus 107 ~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRtG~l~- 185 (387)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ ++++|++||+|||||||.+.
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 79 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG-KTAAILLDTKGPEIRTMKLEG 79 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCEEBCCBGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCEEEEEecCC
Confidence 4899999999999999999999999999999999999999999999999999988764 88999999999999999997
Q ss_pred -CCeEecCCCEEEEEec-CCCCCccEEEeccCCcccccCcCCEEEEeCCeEEEEEEEEeCCeEEEEEEECcEecCCccee
Q 016564 186 -QPITLTSGQEFTFTIQ-RGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDGGELKSRRHLN 263 (387)
Q Consensus 186 -~~i~Lk~G~~v~lt~~-~~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V~~gG~L~s~KgVn 263 (387)
++++|++||+|+||.+ ...|+.+.++++|++|++++++||.||+|||+|.|+|.+++++.+.|+|.+||.|+++||||
T Consensus 80 ~~~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i~~~v~~gG~L~~~KgvN 159 (470)
T 1e0t_A 80 GNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVN 159 (470)
T ss_dssp GCCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEEEEECSCEEECSSCEEE
T ss_pred CCceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeEEEEEecCcEEeCCceee
Confidence 3799999999999998 34688889999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhc-CCCceEEEecCChhhhhcHHHHHhhcCe
Q 016564 264 VRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC-GADIHVIVKIESADSIPNLHSIITASDG 342 (387)
Q Consensus 264 ~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~-g~~i~IIAKIEt~~gv~NL~eIl~~sDG 342 (387)
+||..+++|+||++|.+||+|++++|+|+|++|||++++|+++++++|.+. |.++.|||||||++|++|++||++++||
T Consensus 160 lPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDg 239 (470)
T 1e0t_A 160 LPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDG 239 (470)
T ss_dssp CSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCE
Confidence 999999999999999999999999999999999999999999999999998 8899999999999999999999999999
Q ss_pred EEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 343 AMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
|||||||||+|+|+++++.+|++|+.+|+++|||+ |+|++.|
T Consensus 240 ImVargDLgveig~e~v~~~qk~ii~~araaGkpv--I~ATQML 281 (470)
T 1e0t_A 240 IMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVV--ITATMML 281 (470)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEE--EEECC--
T ss_pred EEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCE--EEechhh
Confidence 99999999999999999999999999999999999 9999866
No 9
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=2.2e-77 Score=629.47 Aligned_cols=277 Identities=42% Similarity=0.717 Sum_probs=268.0
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeeecCCCC
Q 016564 107 RRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQ 186 (387)
Q Consensus 107 ~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRtG~l~~ 186 (387)
+|||||||||||+|+++|+|++|+++|||+||||||||++++|+++++++|++++++ +++++|++||+|||||||.+.+
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~-~~~v~il~Dl~GPkiR~g~~~~ 80 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRT-GRTVAILLDTKGPEIRTHNMEN 80 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHT-TCCCEEEEECCCCCCBBCCCTT
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHh-CCceEEEEeCCCCEEEEeccCC
Confidence 689999999999999999999999999999999999999999999999999998876 4889999999999999999975
Q ss_pred -CeEecCCCEEEEEecCCCCCccEEEeccCCcccccCcCCEEEEeCCeEEEEEEEE--eCCeEEEEEEECcEecCCccee
Q 016564 187 -PITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSK--TEDSVKCEVVDGGELKSRRHLN 263 (387)
Q Consensus 187 -~i~Lk~G~~v~lt~~~~~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v--~~d~v~c~V~~gG~L~s~KgVn 263 (387)
+++|++||+|+||.+...|+.+.++++|++|++++++||+||+|||+|.|+|+++ +++.+.|+|.+||.|+++||||
T Consensus 81 ~~i~l~~G~~~~l~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kgvn 160 (587)
T 2e28_A 81 GAIELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVN 160 (587)
T ss_dssp SCBCCCSSCEEEEESSCCCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBEE
T ss_pred CcEEEecCCEEEEEecCcCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCceee
Confidence 7999999999999987678889999999999999999999999999999999999 8999999999999999999999
Q ss_pred eCCCCCCCCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCC-CceEEEecCChhhhhcHHHHHhhcCe
Q 016564 264 VRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKIESADSIPNLHSIITASDG 342 (387)
Q Consensus 264 ~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~-~i~IIAKIEt~~gv~NL~eIl~~sDG 342 (387)
+||..+++|+||++|.+||+|++++|+|+|++|||++++|++++++++.+.|. ++.|||||||++|++|||||++++||
T Consensus 161 lPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~Dg 240 (587)
T 2e28_A 161 VPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADG 240 (587)
T ss_dssp CTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999885 89999999999999999999999999
Q ss_pred EEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 343 AMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
|||||||||+|+|+++++.+||+|+++|+++|||+ |.|++.|
T Consensus 241 ImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpv--i~ATQmL 282 (587)
T 2e28_A 241 LMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPV--ITATQML 282 (587)
T ss_dssp EEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCE--EEESSSS
T ss_pred EEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCe--EEechhh
Confidence 99999999999999999999999999999999999 7887765
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=8.9e-78 Score=621.76 Aligned_cols=280 Identities=34% Similarity=0.569 Sum_probs=266.2
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeeeecCC
Q 016564 105 TVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDL 184 (387)
Q Consensus 105 ~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIRtG~l 184 (387)
..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++++++++++|+|++||+|||||||.+
T Consensus 16 ~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~il~Dl~GPkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEeCCCCEEEEeec
Confidence 45799999999999999999999999999999999999999999999999999999877548899999999999999999
Q ss_pred CC--CeEecCCCEEEEEecCC---CCCccEEEeccCCcccccCcCCEEEEeCCeEEEEEEEE-eCCeEEEEEEECcEecC
Q 016564 185 PQ--PITLTSGQEFTFTIQRG---VGSAECVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSK-TEDSVKCEVVDGGELKS 258 (387)
Q Consensus 185 ~~--~i~Lk~G~~v~lt~~~~---~g~~~~i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v-~~d~v~c~V~~gG~L~s 258 (387)
.+ +++|++||+|+||.+.. .|+.+.++++|++|++++++||.||+|||+|.|+|+++ +++.+.|+|++||.|++
T Consensus 96 ~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~~v~~~v~~gG~L~~ 175 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVVDDKTLKVKALNAGKICS 175 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEECCBCCC--CEEEEBCSCCCCCS
T ss_pred CCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEEEEEEccCCeEEEEEecCCEEeC
Confidence 74 69999999999999753 57888999999999999999999999999999999999 89999999999999999
Q ss_pred CcceeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHh
Q 016564 259 RRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (387)
Q Consensus 259 ~KgVn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~ 338 (387)
+||||+||..+++|.||++|.+||+|+++.|+|+|++|||++++|++++++++.+.+.++.|||||||++|++|++||++
T Consensus 176 ~KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~ 255 (500)
T 1a3w_A 176 HKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILK 255 (500)
T ss_dssp SCBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHH
T ss_pred CCCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred hcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 339 ASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 339 ~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
++|||||||||||+|+|.++++.+|++|+.+|+++|||+ |.|++.|
T Consensus 256 ~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpv--i~ATQML 301 (500)
T 1a3w_A 256 VTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPV--ICATQML 301 (500)
T ss_dssp HSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCE--EECSSTT
T ss_pred hCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCE--EEEeehh
Confidence 999999999999999999999999999999999999999 7666544
No 11
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.67 E-value=4.5e-17 Score=157.21 Aligned_cols=110 Identities=12% Similarity=0.069 Sum_probs=100.6
Q ss_pred CCCC-cccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHh--hcCeEEEcCC
Q 016564 272 PSIT-EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT--ASDGAMVARG 348 (387)
Q Consensus 272 p~LT-e~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~--~sDGImIaRG 348 (387)
+.++ +++.+||+++++ |+|+|++|||++++|++.+.+++...|.++.++++|||++|+.|+++|+. .+|+++||++
T Consensus 76 ~~~~~~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~ 154 (284)
T 1sgj_A 76 NALHSPYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAE 154 (284)
T ss_dssp CCTTSTTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHH
T ss_pred CCCCCHhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHH
Confidence 3344 678889999999 99999999999999999999999877778999999999999999999996 3899999999
Q ss_pred cccccCCC------CcHHHHHHHHHHHHHHCCCCccccccce
Q 016564 349 DLGAELPI------EEVPLLQVVFISDIRAMPRMSSSIKAFY 384 (387)
Q Consensus 349 DLg~elg~------e~v~~~Qk~II~~c~aaGKp~g~id~~~ 384 (387)
||+.++|. +.+..++++++.+|+++||++ ||++|
T Consensus 155 DL~~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~--i~~v~ 194 (284)
T 1sgj_A 155 DYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAA--LDIVV 194 (284)
T ss_dssp HHHHHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEE--EECCC
T ss_pred HHHHHhCCCCCCChHHHHHHHHHHHHHHHHcCCCe--eeCCc
Confidence 99999998 568999999999999999999 88887
No 12
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.66 E-value=7.2e-17 Score=156.71 Aligned_cols=104 Identities=24% Similarity=0.302 Sum_probs=91.0
Q ss_pred ccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHh---------------------------cCCCceEEEecCChhh
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS---------------------------CGADIHVIVKIESADS 329 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~---------------------------~g~~i~IIAKIEt~~g 329 (387)
.|..||+++++.|+++|++|||++++|++++.+.+.. .+.++.|++||||++|
T Consensus 99 ~d~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~a 178 (287)
T 2v5j_A 99 NDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREA 178 (287)
T ss_dssp SCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHH
T ss_pred CCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHH
Confidence 4556899999999999999999999999999876531 1224789999999999
Q ss_pred hhcHHHHHhh--cCeEEEcCCcccccCCC------CcHHHHHHHHHHHHHHCCCCcccc
Q 016564 330 IPNLHSIITA--SDGAMVARGDLGAELPI------EEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 330 v~NL~eIl~~--sDGImIaRGDLg~elg~------e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
++|++||+++ +|+++||++||+.++|. +.+..++++++.+|+++||++|++
T Consensus 179 v~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~ 237 (287)
T 2v5j_A 179 MKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL 237 (287)
T ss_dssp HHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe
Confidence 9999999975 89999999999999997 358889999999999999999753
No 13
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.66 E-value=8.7e-17 Score=154.31 Aligned_cols=102 Identities=23% Similarity=0.282 Sum_probs=90.6
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHh---------------------------cCCCceEEEecCChhhh
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS---------------------------CGADIHVIVKIESADSI 330 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~---------------------------~g~~i~IIAKIEt~~gv 330 (387)
|..+|+++++.|+|+|++|||++++|++.+.+.+.. .+.++.|+++|||++|+
T Consensus 79 ~~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av 158 (267)
T 2vws_A 79 SKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTAL 158 (267)
T ss_dssp CHHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHH
T ss_pred CHHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHH
Confidence 457899999999999999999999999999876531 12247899999999999
Q ss_pred hcHHHHHhh--cCeEEEcCCcccccCCC------CcHHHHHHHHHHHHHHCCCCccc
Q 016564 331 PNLHSIITA--SDGAMVARGDLGAELPI------EEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 331 ~NL~eIl~~--sDGImIaRGDLg~elg~------e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
+|++||+++ .|+++||++||+.++|. +.+..++++++.+|+++||++|+
T Consensus 159 ~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v 215 (267)
T 2vws_A 159 DNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGF 215 (267)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 999999987 89999999999999997 35888899999999999999975
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.64 E-value=2.4e-16 Score=150.96 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=90.8
Q ss_pred HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHH---------------------------hcCCCceEEEecCChhhhhc
Q 016564 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLK---------------------------SCGADIHVIVKIESADSIPN 332 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~---------------------------~~g~~i~IIAKIEt~~gv~N 332 (387)
.||+++++.|+|+|++|||++++|++.+.++++ ..+.++.++++|||++|+.|
T Consensus 79 ~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~ 158 (261)
T 3qz6_A 79 AHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVED 158 (261)
T ss_dssp HHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHT
T ss_pred HHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHH
Confidence 589999999999999999999999999887763 22356899999999999999
Q ss_pred HHHHHhh--cCeEEEcCCcccccCCCC------cHHHHHHHHHHHHHHCCCCcccc
Q 016564 333 LHSIITA--SDGAMVARGDLGAELPIE------EVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 333 L~eIl~~--sDGImIaRGDLg~elg~e------~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
++||+++ .|+++||++||+.++|.. .+..++++++.+|+++||++|+.
T Consensus 159 ~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~ 214 (261)
T 3qz6_A 159 IDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFF 214 (261)
T ss_dssp HHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 9999954 899999999999999874 68899999999999999999854
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.64 E-value=3.8e-16 Score=148.80 Aligned_cols=103 Identities=21% Similarity=0.221 Sum_probs=91.7
Q ss_pred ccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHH--------------------------hcCCCceEEEecCChhhh
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLK--------------------------SCGADIHVIVKIESADSI 330 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~--------------------------~~g~~i~IIAKIEt~~gv 330 (387)
.|...|+++++.|+++|++|||++++|++.+.+.+. ..+.++.|+++|||++|+
T Consensus 79 ~~~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av 158 (256)
T 1dxe_A 79 NEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGV 158 (256)
T ss_dssp SCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHH
T ss_pred CCHHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHH
Confidence 455669999999999999999999999999988774 123568899999999999
Q ss_pred hcHHHHHhh--cCeEEEcCCcccccCCC------CcHHHHHHHHHHHHHHCCCCccc
Q 016564 331 PNLHSIITA--SDGAMVARGDLGAELPI------EEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 331 ~NL~eIl~~--sDGImIaRGDLg~elg~------e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
.|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++||++|+
T Consensus 159 ~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v 215 (256)
T 1dxe_A 159 DNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGI 215 (256)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEE
Confidence 999999984 89999999999999997 35888999999999999999974
No 16
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.60 E-value=8.3e-16 Score=152.54 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=90.2
Q ss_pred HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhc--------------------------------CCCceEEEecCCh
Q 016564 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC--------------------------------GADIHVIVKIESA 327 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~--------------------------------g~~i~IIAKIEt~ 327 (387)
.+|+++++.|+++|++|||++++|++++++++... +.++.|+++|||+
T Consensus 108 ~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~ 187 (339)
T 1izc_A 108 VSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESV 187 (339)
T ss_dssp HHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSH
T ss_pred HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChH
Confidence 68999999999999999999999999999887531 1247899999999
Q ss_pred hhhhcHHHHHhh--cCeEEEcCCccccc--------CCC---CcHHHHHHHHHHHHHHCCCCccc
Q 016564 328 DSIPNLHSIITA--SDGAMVARGDLGAE--------LPI---EEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 328 ~gv~NL~eIl~~--sDGImIaRGDLg~e--------lg~---e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
+|++|+++|+++ +|+++||++||+.+ +|. +.+..++++|+.+|+++||++|.
T Consensus 188 ~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~ 252 (339)
T 1izc_A 188 KGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFG 252 (339)
T ss_dssp HHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeE
Confidence 999999999975 89999999999999 887 57889999999999999999964
No 17
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.43 E-value=1.1e-13 Score=136.05 Aligned_cols=109 Identities=20% Similarity=0.269 Sum_probs=96.4
Q ss_pred CcccHHHHHhhHhcCC--CEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh---cCeEEEcCCc
Q 016564 275 TEKDWDDIKFGVDNKV--DFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA---SDGAMVARGD 349 (387)
Q Consensus 275 Te~D~~dI~~a~~~gv--D~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~---sDGImIaRGD 349 (387)
|++..+||..+++.|. |+|.+|+|+++++++.+.+++...+.++.++++|||++|+.|+++|+.+ .|++++|..|
T Consensus 113 t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~D 192 (316)
T 3qll_A 113 TRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAAD 192 (316)
T ss_dssp SHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHH
T ss_pred CchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHH
Confidence 4566789999999875 9999999999999999999987767788999999999999999999984 6799999999
Q ss_pred ccccCCCC----cHHHHHHHHHHHHHHCCCCcccccccee
Q 016564 350 LGAELPIE----EVPLLQVVFISDIRAMPRMSSSIKAFYL 385 (387)
Q Consensus 350 Lg~elg~e----~v~~~Qk~II~~c~aaGKp~g~id~~~~ 385 (387)
|+.++|+. .+.++..+++.+|+++|+++ ||++|.
T Consensus 193 L~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~--id~v~~ 230 (316)
T 3qll_A 193 MAADIGAASTWEPLALARARLVSACAMNGIPA--IDAPFF 230 (316)
T ss_dssp HHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCE--EECCCS
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHHHHHcCCce--eecccc
Confidence 99999974 46777899999999999999 999984
No 18
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.40 E-value=2.6e-13 Score=134.11 Aligned_cols=109 Identities=14% Similarity=0.121 Sum_probs=93.4
Q ss_pred CcccHHHHHhhHhc---CCCEEEEcCCCCHHHHHHHHHHHHhc----C--CCceEEEecCChhhhhcHHHHHhh--cCeE
Q 016564 275 TEKDWDDIKFGVDN---KVDFYAVSFVKDAQVVHELKNYLKSC----G--ADIHVIVKIESADSIPNLHSIITA--SDGA 343 (387)
Q Consensus 275 Te~D~~dI~~a~~~---gvD~I~lSfV~sa~dV~~l~~~L~~~----g--~~i~IIAKIEt~~gv~NL~eIl~~--sDGI 343 (387)
|++-.+||..+++. |+|+|++|+|++++|++.+.+++... | ..+.++++|||+.|+.|+++|++. .|++
T Consensus 94 t~~~~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L 173 (332)
T 3qqw_A 94 HPAWRQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVL 173 (332)
T ss_dssp STTHHHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEE
T ss_pred ChHHHHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEE
Confidence 45567788887776 99999999999999999999888643 2 468899999999999999999954 6799
Q ss_pred EEcCCcccccCCCC---------------cHHHHHHHHHHHHHHCCCCcccccccee
Q 016564 344 MVARGDLGAELPIE---------------EVPLLQVVFISDIRAMPRMSSSIKAFYL 385 (387)
Q Consensus 344 mIaRGDLg~elg~e---------------~v~~~Qk~II~~c~aaGKp~g~id~~~~ 385 (387)
++|.+||+.++|.. .+.++..+++.+|+++|+++ ||++|.
T Consensus 174 ~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~--id~v~~ 228 (332)
T 3qqw_A 174 DFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVP--AHNVCL 228 (332)
T ss_dssp EECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEE--EECCCS
T ss_pred EEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCc--ccCCcc
Confidence 99999999999862 15667889999999999998 999984
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.36 E-value=5.6e-13 Score=128.23 Aligned_cols=100 Identities=21% Similarity=0.150 Sum_probs=88.5
Q ss_pred cccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh--cCeEEEcCCccccc
Q 016564 276 EKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLGAE 353 (387)
Q Consensus 276 e~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--sDGImIaRGDLg~e 353 (387)
++-..||+.+++.|+|+|.+|+|+++++++.+. ++.++++|||++|+.|++||+.. .||+++|+.||+.+
T Consensus 71 ~~~~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~ 142 (273)
T 1u5h_A 71 ADQARDLEALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIAT 142 (273)
T ss_dssp HHHHHHHHHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHH
Confidence 455678999999999999999999999999763 68899999999999999999854 57999999999999
Q ss_pred CCCC-----------cHHHHHHHHHHHHHHCCCCcccccccee
Q 016564 354 LPIE-----------EVPLLQVVFISDIRAMPRMSSSIKAFYL 385 (387)
Q Consensus 354 lg~e-----------~v~~~Qk~II~~c~aaGKp~g~id~~~~ 385 (387)
+|.. .+.++..+++.+|+++|+++ ||++|.
T Consensus 143 lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~a--id~v~~ 183 (273)
T 1u5h_A 143 LGGSSSRRADGAYRDVARHVRSTILLAASAFGRLA--LDAVHL 183 (273)
T ss_dssp HTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEE--EECCCS
T ss_pred hCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCc--ccCCcC
Confidence 9863 26677899999999999998 999984
No 20
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.33 E-value=2.3e-12 Score=127.75 Aligned_cols=109 Identities=8% Similarity=0.127 Sum_probs=90.7
Q ss_pred CcccHHHHHhhHhc---CCCEEEEcCCCCHHHHHHHHHHHHhc----C--CCceEEEecCChhhhhcHHHHHhh--cCeE
Q 016564 275 TEKDWDDIKFGVDN---KVDFYAVSFVKDAQVVHELKNYLKSC----G--ADIHVIVKIESADSIPNLHSIITA--SDGA 343 (387)
Q Consensus 275 Te~D~~dI~~a~~~---gvD~I~lSfV~sa~dV~~l~~~L~~~----g--~~i~IIAKIEt~~gv~NL~eIl~~--sDGI 343 (387)
|++-.+||..+++. |+|+|++|+|++++||+.+.+++... | ..+.++++|||+.|+.|+++|++. .|++
T Consensus 93 t~~~~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L 172 (339)
T 3r4i_A 93 HAHWRDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEAL 172 (339)
T ss_dssp STTHHHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEE
T ss_pred ccHHHHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEE
Confidence 33556778877765 79999999999999999998887642 2 368899999999999999999953 6899
Q ss_pred EEcCCcccccCCCC---------------cHHHHHHHHHHHHHHCCCCcccccccee
Q 016564 344 MVARGDLGAELPIE---------------EVPLLQVVFISDIRAMPRMSSSIKAFYL 385 (387)
Q Consensus 344 mIaRGDLg~elg~e---------------~v~~~Qk~II~~c~aaGKp~g~id~~~~ 385 (387)
++|.+||+.++|.. .+..+..+++.+|+++|+++ ||++|.
T Consensus 173 ~~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~--id~v~~ 227 (339)
T 3r4i_A 173 SFGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVP--SHNVST 227 (339)
T ss_dssp EECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEE--EECCCC
T ss_pred EECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCC--ccCCCc
Confidence 99999999999852 14567789999999999998 999984
No 21
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.27 E-value=3.4e-12 Score=125.86 Aligned_cols=109 Identities=14% Similarity=0.137 Sum_probs=92.2
Q ss_pred CCCCCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHh-------cC----CCceEEEecCChhhhhcHHHHHhh
Q 016564 271 LPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS-------CG----ADIHVIVKIESADSIPNLHSIITA 339 (387)
Q Consensus 271 lp~LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~-------~g----~~i~IIAKIEt~~gv~NL~eIl~~ 339 (387)
-|.+-..|...|..+.+.|.+.|++|||+++++++.+++++.+ .| .++.++++|||+.|+.|+++|+++
T Consensus 117 ~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~ 196 (324)
T 2xz9_A 117 RPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKE 196 (324)
T ss_dssp CHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTT
T ss_pred chhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh
Confidence 3556666777888888899999999999999998888887742 12 368999999999999999999999
Q ss_pred cCeEEEcCCcccc-cCCC---------------CcHHHHHHHHHHHHHHCCCCccc
Q 016564 340 SDGAMVARGDLGA-ELPI---------------EEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 340 sDGImIaRGDLg~-elg~---------------e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
.|+++||..||+. .+|. +.+..+.++++.+|+++||++|.
T Consensus 197 vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgv 252 (324)
T 2xz9_A 197 VDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAM 252 (324)
T ss_dssp CSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceee
Confidence 9999999999995 4453 24667789999999999999975
No 22
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=99.20 E-value=1e-11 Score=126.10 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=94.9
Q ss_pred Ccc-cHHHHHhhHh------cCCCEEEEcCCCCHHHHHHHHHHHHhc----C---CCceEEEecCChhh---hhcHHHHH
Q 016564 275 TEK-DWDDIKFGVD------NKVDFYAVSFVKDAQVVHELKNYLKSC----G---ADIHVIVKIESADS---IPNLHSII 337 (387)
Q Consensus 275 Te~-D~~dI~~a~~------~gvD~I~lSfV~sa~dV~~l~~~L~~~----g---~~i~IIAKIEt~~g---v~NL~eIl 337 (387)
|++ ..+||..++. .++|+|.+|+|++++++..+.+++... | +.+.++++|||+.| +.|+++|+
T Consensus 94 T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIA 173 (433)
T 3oyz_A 94 TRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEM 173 (433)
T ss_dssp HHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHH
T ss_pred ChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHH
Confidence 556 6788888877 789999999999999999998887532 2 36899999999999 99999999
Q ss_pred hhc-------CeEEEcCCcccccCCCC-------cHHHHHHHHHHHHHHCCCCcccccccee
Q 016564 338 TAS-------DGAMVARGDLGAELPIE-------EVPLLQVVFISDIRAMPRMSSSIKAFYL 385 (387)
Q Consensus 338 ~~s-------DGImIaRGDLg~elg~e-------~v~~~Qk~II~~c~aaGKp~g~id~~~~ 385 (387)
.++ +|+++|+.||+.++|.. .+.++..+++.+|+++|+++ ||++|.
T Consensus 174 aasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~a--IDgV~~ 233 (433)
T 3oyz_A 174 GKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVA--VDGPYD 233 (433)
T ss_dssp HCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEE--EECCCC
T ss_pred hhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc--cccccc
Confidence 874 59999999999999873 46788899999999999998 999984
No 23
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.03 E-value=1.8e-10 Score=125.59 Aligned_cols=106 Identities=16% Similarity=0.151 Sum_probs=92.4
Q ss_pred CCcccHHHHHhhHh-cC--CCEEEEcCCCCHHHHHHHHHHHHhcCC----C-ceEEEecCChhhhhcHHHHHhhcCeEEE
Q 016564 274 ITEKDWDDIKFGVD-NK--VDFYAVSFVKDAQVVHELKNYLKSCGA----D-IHVIVKIESADSIPNLHSIITASDGAMV 345 (387)
Q Consensus 274 LTe~D~~dI~~a~~-~g--vD~I~lSfV~sa~dV~~l~~~L~~~g~----~-i~IIAKIEt~~gv~NL~eIl~~sDGImI 345 (387)
+.+.+.+.|..+.+ .| .+.|++|||+++++++.+++.+...|. + +.|+++|||+.|+.|+++|++++|++.|
T Consensus 622 ~~~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~si 701 (794)
T 2ols_A 622 CFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSI 701 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEE
Confidence 33446677777888 67 789999999999999999999987653 3 8899999999999999999999999999
Q ss_pred cCCccccc-CCCC---------------cHHHHHHHHHHHHHHCCCCccc
Q 016564 346 ARGDLGAE-LPIE---------------EVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 346 aRGDLg~e-lg~e---------------~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
|..||+.. +|+. .|..+.++++.+|+++||++|+
T Consensus 702 GtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgi 751 (794)
T 2ols_A 702 GSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGI 751 (794)
T ss_dssp EHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEE
Confidence 99999998 8863 3677789999999999999974
No 24
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=98.92 E-value=9.3e-10 Score=115.94 Aligned_cols=106 Identities=14% Similarity=0.075 Sum_probs=88.3
Q ss_pred CCcccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHh-------cC----CCceEEEecCChhhhhcHHHHHhhcCe
Q 016564 274 ITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS-------CG----ADIHVIVKIESADSIPNLHSIITASDG 342 (387)
Q Consensus 274 LTe~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~-------~g----~~i~IIAKIEt~~gv~NL~eIl~~sDG 342 (387)
+-..+...|..+.+.|...|++|||.++++++.+++.+.+ .| .++.+.++|||+.|+.++++|++.+|+
T Consensus 369 if~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf 448 (575)
T 2hwg_A 369 ILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDF 448 (575)
T ss_dssp HHHHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCCE
Confidence 3334456677788889999999999999999888877742 23 368899999999999999999999999
Q ss_pred EEEcCCcccc----------cCCC------CcHHHHHHHHHHHHHHCCCCccc
Q 016564 343 AMVARGDLGA----------ELPI------EEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 343 ImIaRGDLg~----------elg~------e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
+.||..||+. .++. +.|..+.++++.+|+++||++|+
T Consensus 449 ~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgv 501 (575)
T 2hwg_A 449 FSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGM 501 (575)
T ss_dssp EEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 9999999998 4432 24667779999999999999985
No 25
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=98.91 E-value=1e-09 Score=115.61 Aligned_cols=102 Identities=14% Similarity=0.032 Sum_probs=85.0
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHh-------cC----CCceEEEecCChhhhhcHHHHHhhcCeEEEc
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKS-------CG----ADIHVIVKIESADSIPNLHSIITASDGAMVA 346 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~-------~g----~~i~IIAKIEt~~gv~NL~eIl~~sDGImIa 346 (387)
+...|..+.+.|...|++|||.++++++.+++++.+ .| .++.+.++|||+.|+.++++|++.+|++.||
T Consensus 375 QlrAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siG 454 (572)
T 2wqd_A 375 QLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIG 454 (572)
T ss_dssp HHHHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEEC
Confidence 335577788889999999999999999988877641 13 3688999999999999999999999999999
Q ss_pred CCcccc-cCCC---------------CcHHHHHHHHHHHHHHCCCCccc
Q 016564 347 RGDLGA-ELPI---------------EEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 347 RGDLg~-elg~---------------e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
..||+. .+++ +.|..+.++++.+|+++||++|+
T Consensus 455 tNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgi 503 (572)
T 2wqd_A 455 TNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGM 503 (572)
T ss_dssp HHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 999993 2332 24667779999999999999984
No 26
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=98.41 E-value=4.6e-07 Score=94.46 Aligned_cols=106 Identities=9% Similarity=0.040 Sum_probs=81.3
Q ss_pred ccHHHHHhhHhcC-CCEEEEcCCCCHHHHHHHHHHHHh----cC---CCceEEEecCChhhhhcHHHHHhh-cC---eEE
Q 016564 277 KDWDDIKFGVDNK-VDFYAVSFVKDAQVVHELKNYLKS----CG---ADIHVIVKIESADSIPNLHSIITA-SD---GAM 344 (387)
Q Consensus 277 ~D~~dI~~a~~~g-vD~I~lSfV~sa~dV~~l~~~L~~----~g---~~i~IIAKIEt~~gv~NL~eIl~~-sD---GIm 344 (387)
+-..|++..+..| .++|.+|++++++++..+.+.+.. .| +.+++++.|||+.|+.|++||+.+ .+ |+.
T Consensus 193 ~~~~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn 272 (532)
T 3cuz_A 193 YFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLN 272 (532)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEE
T ss_pred HHHHHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEE
Confidence 3445666555543 499999999999999999887742 22 358999999999999999999976 44 999
Q ss_pred EcCCcccccCCC-------------------CcHHHHHHHHH-HHHHHCCCCccccccce
Q 016564 345 VARGDLGAELPI-------------------EEVPLLQVVFI-SDIRAMPRMSSSIKAFY 384 (387)
Q Consensus 345 IaRGDLg~elg~-------------------e~v~~~Qk~II-~~c~aaGKp~g~id~~~ 384 (387)
.|+.|+..++.. ..+..+..+++ .+|+++|+.+ |||++
T Consensus 273 ~G~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~a--IdGm~ 330 (532)
T 3cuz_A 273 CGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFA--MGGMA 330 (532)
T ss_dssp CCSHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEE--EEEEE
T ss_pred cCHHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCC--ccCcc
Confidence 999999887720 11344555555 9999999998 99654
No 27
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=98.38 E-value=4.2e-07 Score=94.74 Aligned_cols=101 Identities=13% Similarity=0.090 Sum_probs=77.8
Q ss_pred HHhhH--hcCCCEEEEcCCCCHHHHHHHHHHHHhc----C---CCceEEEecCChhhhhcHHHHHhh-cC---eEEEcCC
Q 016564 282 IKFGV--DNKVDFYAVSFVKDAQVVHELKNYLKSC----G---ADIHVIVKIESADSIPNLHSIITA-SD---GAMVARG 348 (387)
Q Consensus 282 I~~a~--~~gvD~I~lSfV~sa~dV~~l~~~L~~~----g---~~i~IIAKIEt~~gv~NL~eIl~~-sD---GImIaRG 348 (387)
++..+ ..|+ ||.+|++++++++..+.+++... | +.+++.+.|||+.|+.|++||+.+ .+ |+..|+.
T Consensus 195 l~~l~~~~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~ 273 (528)
T 3cux_A 195 AKALLEKGSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRW 273 (528)
T ss_dssp HHHHHHTTCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSH
T ss_pred HHHHHhcCCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHH
Confidence 44444 3576 99999999999999998877432 2 368999999999999999999966 33 9999999
Q ss_pred cccccCCC------C--------------cHHHHHHHHHHHHHHCCCCcccccccee
Q 016564 349 DLGAELPI------E--------------EVPLLQVVFISDIRAMPRMSSSIKAFYL 385 (387)
Q Consensus 349 DLg~elg~------e--------------~v~~~Qk~II~~c~aaGKp~g~id~~~~ 385 (387)
|+..+++. + -+..+++.++.+|+++|+.+ |||+|.
T Consensus 274 Dy~~s~i~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~a--IgGm~a 328 (528)
T 3cux_A 274 DYIFSFLKAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPA--IGGMAA 328 (528)
T ss_dssp HHHHHHHHHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCE--EC----
T ss_pred HHHHHhhhhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCC--cccccc
Confidence 99888751 0 13445577889999999999 999874
No 28
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.34 E-value=3.6e-07 Score=100.40 Aligned_cols=91 Identities=15% Similarity=0.034 Sum_probs=76.1
Q ss_pred CCC---EEEEcCCCCHHHHHHHHHHHHh--------cC--CCceEEEecCChhhhhcHHHHHhhcCeEEEcCCccc-ccC
Q 016564 289 KVD---FYAVSFVKDAQVVHELKNYLKS--------CG--ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLG-AEL 354 (387)
Q Consensus 289 gvD---~I~lSfV~sa~dV~~l~~~L~~--------~g--~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg-~el 354 (387)
|.+ .|++|||+++++++.+++++.+ .| .++.|+++|||+.|+.++++|++.+|++.||..||. ..+
T Consensus 701 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~l 780 (876)
T 1vbg_A 701 GVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTF 780 (876)
T ss_dssp TCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 6999999999999999877642 23 258899999999999999999999999999999999 555
Q ss_pred CCC----------------------------cHHHHHHHHHHHHHHC--CCCccc
Q 016564 355 PIE----------------------------EVPLLQVVFISDIRAM--PRMSSS 379 (387)
Q Consensus 355 g~e----------------------------~v~~~Qk~II~~c~aa--GKp~g~ 379 (387)
|+. .|..+.+.++++|+++ ||++|+
T Consensus 781 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgi 835 (876)
T 1vbg_A 781 GYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGI 835 (876)
T ss_dssp TCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 543 3555668899999998 899874
No 29
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.23 E-value=9.1e-07 Score=97.25 Aligned_cols=91 Identities=14% Similarity=0.113 Sum_probs=76.2
Q ss_pred CCC---EEEEcCCCCHHHHHHHHHHHHh--------cC--CCceEEEecCChhhhhcHHHHHhhcCeEEEcCCccc-ccC
Q 016564 289 KVD---FYAVSFVKDAQVVHELKNYLKS--------CG--ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLG-AEL 354 (387)
Q Consensus 289 gvD---~I~lSfV~sa~dV~~l~~~L~~--------~g--~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg-~el 354 (387)
|.+ .|++|||+++++++.+++++.+ .| .++.|+++|||+.|+.++++|++.+|++.||..||. ..+
T Consensus 695 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~l 774 (873)
T 1kbl_A 695 GIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTF 774 (873)
T ss_dssp CCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 6999999999999999987752 24 258899999999999999999999999999999999 666
Q ss_pred CCC----------------------------cHHHHHHHHHHHHHHC--CCCccc
Q 016564 355 PIE----------------------------EVPLLQVVFISDIRAM--PRMSSS 379 (387)
Q Consensus 355 g~e----------------------------~v~~~Qk~II~~c~aa--GKp~g~ 379 (387)
|+. .|..+.+.++++|+++ |+++|+
T Consensus 775 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgi 829 (873)
T 1kbl_A 775 GFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGI 829 (873)
T ss_dssp TCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 653 3455668899999997 889873
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=98.19 E-value=1e-06 Score=93.95 Aligned_cols=106 Identities=12% Similarity=-0.012 Sum_probs=80.5
Q ss_pred cHHHHHhhHhc--CCCEEEEcCCCCHHHHHHHHHHHHh----cC---CCceEEEecCChhhhhcHHHHHh-hc---CeEE
Q 016564 278 DWDDIKFGVDN--KVDFYAVSFVKDAQVVHELKNYLKS----CG---ADIHVIVKIESADSIPNLHSIIT-AS---DGAM 344 (387)
Q Consensus 278 D~~dI~~a~~~--gvD~I~lSfV~sa~dV~~l~~~L~~----~g---~~i~IIAKIEt~~gv~NL~eIl~-~s---DGIm 344 (387)
-..|++..+.. |.++|.+|++++++++..+.+++.. .| ..++++++|||+.|+.|++||+. +. .|+.
T Consensus 371 ~~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn 450 (731)
T 1p7t_A 371 ALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFIN 450 (731)
T ss_dssp HHHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEE
T ss_pred HHhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEE
Confidence 35566655543 5899999999999999999887742 23 36899999999999999999985 33 4999
Q ss_pred EcCCcccccC-CCC---------------cHH-HHHHHHHH---HHHHCCCCccccc-ccee
Q 016564 345 VARGDLGAEL-PIE---------------EVP-LLQVVFIS---DIRAMPRMSSSIK-AFYL 385 (387)
Q Consensus 345 IaRGDLg~el-g~e---------------~v~-~~Qk~II~---~c~aaGKp~g~id-~~~~ 385 (387)
.|+.|+..++ +.. .+. ..+...+. +|+++|+.+ || |+|.
T Consensus 451 ~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~a--IgkGm~a 510 (731)
T 1p7t_A 451 TGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQ--IGKGMWA 510 (731)
T ss_dssp ECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSE--EEECCCC
T ss_pred cCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCC--ccccccc
Confidence 9999998885 321 122 22344443 899999998 99 9984
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.00 E-value=0.0021 Score=71.01 Aligned_cols=110 Identities=16% Similarity=0.061 Sum_probs=83.2
Q ss_pred CCCCCCcccHHHHHhhHh----cCCC---EEEEcCCCCHHHHHHHHHHHH--------hcCC--CceEEEecCChhhhhc
Q 016564 270 TLPSITEKDWDDIKFGVD----NKVD---FYAVSFVKDAQVVHELKNYLK--------SCGA--DIHVIVKIESADSIPN 332 (387)
Q Consensus 270 ~lp~LTe~D~~dI~~a~~----~gvD---~I~lSfV~sa~dV~~l~~~L~--------~~g~--~i~IIAKIEt~~gv~N 332 (387)
..|.+.+-..+.|..|.. .|.+ -|++|||.+.++++.+++.+. +.|. +++|..|||+|.+.-.
T Consensus 698 ~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~ 777 (913)
T 1h6z_A 698 TYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVT 777 (913)
T ss_dssp HSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHH
Confidence 445556556665655422 3654 799999999999999998763 2342 5789999999999999
Q ss_pred HHHHHhhcCeEEEcCCccccc-CCC----------------------------CcHHHHHHHHHHHHHH--CCCCccc
Q 016564 333 LHSIITASDGAMVARGDLGAE-LPI----------------------------EEVPLLQVVFISDIRA--MPRMSSS 379 (387)
Q Consensus 333 L~eIl~~sDGImIaRGDLg~e-lg~----------------------------e~v~~~Qk~II~~c~a--aGKp~g~ 379 (387)
+++|++.+|++-||-.||.-- +|+ +-|..+.+.++++|++ .|+++|+
T Consensus 778 ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgI 855 (913)
T 1h6z_A 778 ADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGI 855 (913)
T ss_dssp HHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 999999999999999997631 232 2345566888999997 6999873
No 32
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=96.30 E-value=0.0041 Score=68.94 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=86.0
Q ss_pred HHHHHhhHhcCCC---EEEEcCCCCHHHHHHHHHHHHhcC--CCceEEEecCChhhhhcHHHHHhh---c----------
Q 016564 279 WDDIKFGVDNKVD---FYAVSFVKDAQVVHELKNYLKSCG--ADIHVIVKIESADSIPNLHSIITA---S---------- 340 (387)
Q Consensus 279 ~~dI~~a~~~gvD---~I~lSfV~sa~dV~~l~~~L~~~g--~~i~IIAKIEt~~gv~NL~eIl~~---s---------- 340 (387)
.+.++.+.+.|.+ .+++||++++.||.++--+.++.| ..+.|+.-.||.+.++|.++|+.. .
T Consensus 515 L~~f~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~ 594 (970)
T 1jqo_A 515 IGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGK 594 (970)
T ss_dssp HHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSE
T ss_pred HHHHHHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCe
Confidence 3344455556654 589999999999999999988888 368999999999999999999986 1
Q ss_pred CeEEEcCCcccccCCC----CcHHHHHHHHHHHHHHCCCCccccc
Q 016564 341 DGAMVARGDLGAELPI----EEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 341 DGImIaRGDLg~elg~----e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
--||+|..|=+.+-|+ ..+..+|.++.+.|+++|+.+-.|.
T Consensus 595 QeVMLGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFH 639 (970)
T 1jqo_A 595 QQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFH 639 (970)
T ss_dssp EEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEEEEecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEec
Confidence 1699999999999997 3688999999999999999874443
No 33
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=95.81 E-value=0.01 Score=61.81 Aligned_cols=92 Identities=15% Similarity=0.169 Sum_probs=76.8
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHHHh--------cC-----CCceEEEecCChhhhhcHHHHHhh--c-----------Ce
Q 016564 289 KVDFYAVSFVKDAQVVHELKNYLKS--------CG-----ADIHVIVKIESADSIPNLHSIITA--S-----------DG 342 (387)
Q Consensus 289 gvD~I~lSfV~sa~dV~~l~~~L~~--------~g-----~~i~IIAKIEt~~gv~NL~eIl~~--s-----------DG 342 (387)
.+-.+++||+++++|+.++..++++ .| ..+.||.-+||.+.+.|.++|+.. . --
T Consensus 139 aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Qe 218 (560)
T 3odm_A 139 AISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDLR 218 (560)
T ss_dssp SCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEEE
T ss_pred ccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeEE
Confidence 4556999999999999999777732 12 257899999999999999999985 2 27
Q ss_pred EEEcCCcccccCCC----CcHHHHHHHHHHHHHHCCCCcccc
Q 016564 343 AMVARGDLGAELPI----EEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 343 ImIaRGDLg~elg~----e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
||+|+.|=+.+-|+ ..+..+|.++.+.|+++|++.-.|
T Consensus 219 VMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lF 260 (560)
T 3odm_A 219 IMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPI 260 (560)
T ss_dssp EEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 99999999999997 367889999999999999986333
No 34
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=95.35 E-value=0.016 Score=63.82 Aligned_cols=93 Identities=17% Similarity=0.175 Sum_probs=80.6
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCC--CceEEEecCChhhhhcHHHHHhh---c----------CeEEEcCCccccc
Q 016564 289 KVDFYAVSFVKDAQVVHELKNYLKSCGA--DIHVIVKIESADSIPNLHSIITA---S----------DGAMVARGDLGAE 353 (387)
Q Consensus 289 gvD~I~lSfV~sa~dV~~l~~~L~~~g~--~i~IIAKIEt~~gv~NL~eIl~~---s----------DGImIaRGDLg~e 353 (387)
.+..+++||++++.||.++--+.++.|- .+.|+.-.||.+.++|.++|+.. . --||+|..|=+.+
T Consensus 468 a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~KD 547 (883)
T 1jqn_A 468 SIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKD 547 (883)
T ss_dssp SEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHHH
T ss_pred hcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeecccccc
Confidence 3556899999999999999988888874 58899999999999999999986 1 1699999999999
Q ss_pred CCC----CcHHHHHHHHHHHHHHCCCCccccc
Q 016564 354 LPI----EEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 354 lg~----e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
-|+ ..+..+|.++.+.|+++|+.+-.|.
T Consensus 548 ~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFh 579 (883)
T 1jqn_A 548 AGVMAASWAQYQAQDALIKTCEKAGIELTLFH 579 (883)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCeEEEec
Confidence 997 3688999999999999999874443
No 35
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=95.20 E-value=0.027 Score=62.37 Aligned_cols=60 Identities=18% Similarity=0.134 Sum_probs=51.9
Q ss_pred EEEEcCCCCHHHHHHHHHHHH--------hcCC--CceEEEecCChhhhhcHHHHHhhcCeEEEcCCccc
Q 016564 292 FYAVSFVKDAQVVHELKNYLK--------SCGA--DIHVIVKIESADSIPNLHSIITASDGAMVARGDLG 351 (387)
Q Consensus 292 ~I~lSfV~sa~dV~~l~~~L~--------~~g~--~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg 351 (387)
-|++|||++.++++.+++.+. +.|. +++|..|||+|.+.-.+++|++.+|++=||-.||.
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLT 796 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLT 796 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHH
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHH
Confidence 599999999999988876553 2232 57899999999999999999999999999999984
No 36
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=89.71 E-value=3.4 Score=38.19 Aligned_cols=89 Identities=13% Similarity=0.241 Sum_probs=51.0
Q ss_pred CcccHHHH-HhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEe--cC--C-hhhhhcHHHHHhh-cCeEEEcC
Q 016564 275 TEKDWDDI-KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK--IE--S-ADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 275 Te~D~~dI-~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAK--IE--t-~~gv~NL~eIl~~-sDGImIaR 347 (387)
+..+.+.+ +++.+.|+|+|.+++.-+.+.+.++++ .. ++++++- |- + .+.++.+.+.+++ +||+++++
T Consensus 164 ~~~~~~~~a~~a~~~Gad~i~~~~~~~~~~l~~i~~---~~--~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~ 238 (273)
T 2qjg_A 164 DPELVAHAARLGAELGADIVKTSYTGDIDSFRDVVK---GC--PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGR 238 (273)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCSSHHHHHHHHH---HC--SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCH
T ss_pred CHhHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHH---hC--CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeH
Confidence 44555555 788999999999998544444444433 32 3555552 22 2 1223336666655 89999988
Q ss_pred CcccccCCCCcHHHHHHHHHHHHHH
Q 016564 348 GDLGAELPIEEVPLLQVVFISDIRA 372 (387)
Q Consensus 348 GDLg~elg~e~v~~~Qk~II~~c~a 372 (387)
+=+..+ +....-+.+.+..+.
T Consensus 239 ~i~~~~----~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 239 NIFQHD----DVVGITRAVCKIVHE 259 (273)
T ss_dssp HHHTSS----SHHHHHHHHHHHHHH
T ss_pred HhhCCC----CHHHHHHHHHHHHhc
Confidence 644332 334444455544443
No 37
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=84.80 E-value=2 Score=43.25 Aligned_cols=95 Identities=11% Similarity=0.072 Sum_probs=69.8
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHH---HHHHhcCCCceEEEec--CChhhhhcHHHHHhhcCeEEEcCCccccc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELK---NYLKSCGADIHVIVKI--ESADSIPNLHSIITASDGAMVARGDLGAE 353 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~---~~L~~~g~~i~IIAKI--Et~~gv~NL~eIl~~sDGImIaRGDLg~e 353 (387)
.+-|....+.|+|.|-++ |.+.++...+. +.|...+.+++++|-| .-..++..+++.++..|.+=|-||.+|--
T Consensus 41 v~QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~ 119 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG 119 (406)
T ss_dssp HHHHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST
T ss_pred HHHHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc
Confidence 344556667899998887 66777666655 4455567889999988 34567888888888899999999987631
Q ss_pred CCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 354 LPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 354 lg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
.+...--+.++++|+++|+|+
T Consensus 120 ---~k~~e~~~~vv~~ak~~~~pI 140 (406)
T 4g9p_A 120 ---RHKDEHFAEMIRIAMDLGKPV 140 (406)
T ss_dssp ---HHHHHHHHHHHHHHHHHTCCE
T ss_pred ---ccHHHHHHHHHHHHHHccCCc
Confidence 112334468999999999994
No 38
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=73.64 E-value=5.4 Score=40.90 Aligned_cols=51 Identities=22% Similarity=0.363 Sum_probs=43.7
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHH
Q 016564 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (387)
Q Consensus 109 ~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~ 159 (387)
+..+-+.+|....+.+.++.|+++|++++=||++|+..+.+.++++.+|+.
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~ 269 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 269 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH
Confidence 455677888888889999999999999999999999888887788777753
No 39
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=71.70 E-value=14 Score=37.24 Aligned_cols=101 Identities=10% Similarity=0.040 Sum_probs=61.9
Q ss_pred CCCCcccHHHH-HhhHhcCCCEEEEcCCCC---------------------HHHHHHHHHHHHhcCCCceEEEe--cCCh
Q 016564 272 PSITEKDWDDI-KFGVDNKVDFYAVSFVKD---------------------AQVVHELKNYLKSCGADIHVIVK--IESA 327 (387)
Q Consensus 272 p~LTe~D~~dI-~~a~~~gvD~I~lSfV~s---------------------a~dV~~l~~~L~~~g~~i~IIAK--IEt~ 327 (387)
|.+++.+..++ +.+.+.|+|+|.++.--. +..++.++++-+..+.++.||+- |.|.
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~ 357 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 357 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 45676565555 456789999999996321 11223344333334557888875 6665
Q ss_pred hhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCC
Q 016564 328 DSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 328 ~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp 376 (387)
+-+ ++-|..=+|+|+|||+=+.- |..-+..+.+.+-+...+.|..
T Consensus 358 eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~~ 402 (415)
T 3i65_A 358 LDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 402 (415)
T ss_dssp HHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTCS
T ss_pred HHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCCC
Confidence 443 23333338999999986632 3444556667777777787764
No 40
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=70.17 E-value=16 Score=32.11 Aligned_cols=59 Identities=20% Similarity=0.353 Sum_probs=43.1
Q ss_pred EecCCCEEEEEecCC--CC---CccEEEeccCCccc--ccCcCCEEEEe--CCeEEEEEEEEeCCeEE
Q 016564 189 TLTSGQEFTFTIQRG--VG---SAECVSVNYDDFVN--DVEVGDMLLVD--GGMMSLLVKSKTEDSVK 247 (387)
Q Consensus 189 ~Lk~G~~v~lt~~~~--~g---~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~I~l~V~~v~~d~v~ 247 (387)
-++.|++++|++... +| .+....++-..|.. .+++|+.+.+. +|.+..+|++++++.|.
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEE
Confidence 367899999988642 33 33455666666654 68999999996 57777789999888765
No 41
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=68.65 E-value=15 Score=31.12 Aligned_cols=58 Identities=21% Similarity=0.181 Sum_probs=33.4
Q ss_pred eEecCCCEEEEEecCCCCCccEEEeccC-------CcccccCcCCEEEEeCC----eEEEEEEEE---eCCeEEEEEE
Q 016564 188 ITLTSGQEFTFTIQRGVGSAECVSVNYD-------DFVNDVEVGDMLLVDGG----MMSLLVKSK---TEDSVKCEVV 251 (387)
Q Consensus 188 i~Lk~G~~v~lt~~~~~g~~~~i~v~~~-------~l~~~v~~Gd~IliDDG----~I~l~V~~v---~~d~v~c~V~ 251 (387)
++.+.|..+++|.+ ..+++... -+..+|++||.|++.|| ...-+|.++ ....++|=..
T Consensus 58 I~t~~g~~L~lTp~------H~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT 129 (145)
T 1at0_A 58 LHTDGGAVLTVTPA------HLVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLT 129 (145)
T ss_dssp EEETTSCEEEECTT------CEEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEECCCCEEEEeCC------CEEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEcccc
Confidence 34455666666644 23444322 26789999999999887 233445544 3334555333
No 42
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=68.20 E-value=8.6 Score=37.99 Aligned_cols=47 Identities=23% Similarity=0.381 Sum_probs=37.6
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHH
Q 016564 112 IVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (387)
Q Consensus 112 II~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~ 158 (387)
+-+.+|......+.++.++++|++++=||.+||.++.+.+.|+.+|+
T Consensus 99 vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 99 VGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred EEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 44445555567899999999999999999999988877777776664
No 43
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=67.29 E-value=7.9 Score=38.23 Aligned_cols=51 Identities=18% Similarity=0.288 Sum_probs=41.2
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHH
Q 016564 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (387)
Q Consensus 109 ~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~ 159 (387)
+..+.+.+|......+.++.++++|++++=||++||+++...++++.+|+.
T Consensus 141 ~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 141 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred CceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 345677787655567889999999999999999999987777788877754
No 44
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=67.22 E-value=11 Score=35.70 Aligned_cols=91 Identities=21% Similarity=0.296 Sum_probs=53.4
Q ss_pred cHHHHHhhHhcCCCEE--EEcC---CCCHHHHHH-----------------HHHHHHhcCCCceEEEecC-Ch---hhhh
Q 016564 278 DWDDIKFGVDNKVDFY--AVSF---VKDAQVVHE-----------------LKNYLKSCGADIHVIVKIE-SA---DSIP 331 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I--~lSf---V~sa~dV~~-----------------l~~~L~~~g~~i~IIAKIE-t~---~gv~ 331 (387)
-.+.++...+.|+|+| .+|| +-+.--|+. +.+.+++.+.+++++.+.- ++ -|++
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 3556677778999985 5566 222222222 2222333335677888754 43 3556
Q ss_pred cHHHHHhh--cCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCcc
Q 016564 332 NLHSIITA--SDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 332 NL~eIl~~--sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g 378 (387)
++-+-+.. +||+++. | +++++ ..+.+..|+++|....
T Consensus 114 ~f~~~~~~aGvdgvii~--D----lp~ee----~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA--D----VPVEE----SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHTCCEEEET--T----SCGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEeC--C----CCHhh----HHHHHHHHHHcCCeEE
Confidence 55444433 8999993 4 44444 4567888999997653
No 45
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=66.23 E-value=7.9 Score=35.00 Aligned_cols=59 Identities=20% Similarity=0.353 Sum_probs=43.0
Q ss_pred EecCCCEEEEEecCC--CC---CccEEEeccCCccc--ccCcCCEEEEe--CCeEEEEEEEEeCCeEE
Q 016564 189 TLTSGQEFTFTIQRG--VG---SAECVSVNYDDFVN--DVEVGDMLLVD--GGMMSLLVKSKTEDSVK 247 (387)
Q Consensus 189 ~Lk~G~~v~lt~~~~--~g---~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~I~l~V~~v~~d~v~ 247 (387)
-++.|++++|++... +| ......++-..|.. .+++|+.+.+. +|.+..+|++++++.|+
T Consensus 51 Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (196)
T 2kfw_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (196)
T ss_dssp SSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEE
T ss_pred CCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEE
Confidence 367899999998643 33 33455666666664 68999999997 56677778888888764
No 46
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=66.12 E-value=9.2 Score=35.75 Aligned_cols=75 Identities=11% Similarity=0.118 Sum_probs=51.9
Q ss_pred cccHHH-HHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCC-CceEEEec--CC-hhhhhcHHHHHhh-cCeEEEcCCc
Q 016564 276 EKDWDD-IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGA-DIHVIVKI--ES-ADSIPNLHSIITA-SDGAMVARGD 349 (387)
Q Consensus 276 e~D~~d-I~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~-~i~IIAKI--Et-~~gv~NL~eIl~~-sDGImIaRGD 349 (387)
++.... .+.+.+.|+|||-+||..+.++++++++.. +. .+..+.=| +| .++++|+.+.+++ ++|+.++|.=
T Consensus 158 ~~~i~~a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI 234 (263)
T 1w8s_A 158 PEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNV 234 (263)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhh
Confidence 343333 366788999999999977788888777654 22 34444434 23 5677788888887 8899999876
Q ss_pred cccc
Q 016564 350 LGAE 353 (387)
Q Consensus 350 Lg~e 353 (387)
+..+
T Consensus 235 ~~~~ 238 (263)
T 1w8s_A 235 WQRR 238 (263)
T ss_dssp HTST
T ss_pred cCCc
Confidence 6554
No 47
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=65.28 E-value=20 Score=34.15 Aligned_cols=69 Identities=20% Similarity=0.265 Sum_probs=51.6
Q ss_pred CceEEEecCCCCCC-------------HHHHHHHHHhCCceeEeec-CC--C-----CHHHHHHHHHHHHHHHHhcCCCe
Q 016564 109 KTKIVCTIGPSTNT-------------REMIWKLAEAGMNVARLNM-SH--G-----DHASHQKVIDLVKEYNAQSKDNV 167 (387)
Q Consensus 109 ~TKII~TIGPss~~-------------~e~i~~Li~aGm~v~RiN~-SH--g-----~~e~~~~~I~~iR~~~~~~~~~~ 167 (387)
+|+||+=|.+.-++ .+..++|+++|+++.=||. |- | ..+++.+++..++...++. .
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~---~ 90 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF---E 90 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC---C
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc---C
Confidence 57888877664321 3567899999999999999 42 1 1678888888888877654 3
Q ss_pred eEEEEeCCCCeee
Q 016564 168 IAIMLDTKGPEVR 180 (387)
Q Consensus 168 i~I~lDL~GPkIR 180 (387)
++|.+|+.-|++=
T Consensus 91 ~piSIDT~~~~va 103 (282)
T 1aj0_A 91 VWISVDTSKPEVI 103 (282)
T ss_dssp CEEEEECCCHHHH
T ss_pred CeEEEeCCCHHHH
Confidence 7899999887653
No 48
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=65.13 E-value=24 Score=30.96 Aligned_cols=70 Identities=19% Similarity=0.125 Sum_probs=43.8
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEcCCcccc
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARGDLGA 352 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIaRGDLg~ 352 (387)
+.+.+..+.+.|+|+|.+ |-.....+..++++......++.|++- | ..+|+.+++++ +||+.+|++=+..
T Consensus 110 t~~e~~~a~~~G~d~v~v-~~t~~~g~~~~~~l~~~~~~~ipvia~GGI----~~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 110 TATEAFTALEAGAQALKI-FPSSAFGPQYIKALKAVLPSDIAVFAVGGV----TPENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp SHHHHHHHHHTTCSEEEE-TTHHHHCHHHHHHHHTTSCTTCEEEEESSC----CTTTHHHHHHHTCSEEEECTTTCCT
T ss_pred CHHHHHHHHHCCCCEEEE-ecCCCCCHHHHHHHHHhccCCCeEEEeCCC----CHHHHHHHHHcCCCEEEEChHHhCC
Confidence 444566778899999987 432223344444443322224666653 3 24788888887 8999999875443
No 49
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=64.37 E-value=9.6 Score=39.14 Aligned_cols=51 Identities=16% Similarity=0.248 Sum_probs=43.1
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHH
Q 016564 108 RKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (387)
Q Consensus 108 r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~ 158 (387)
.+..+-+.+|......+.++.|+++|++++=+|.+|+..+.+.++++.+|+
T Consensus 243 ~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 243 GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred cceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 356677788887778999999999999999999999988887777777765
No 50
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=64.04 E-value=10 Score=37.31 Aligned_cols=45 Identities=27% Similarity=0.362 Sum_probs=36.1
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHH
Q 016564 112 IVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (387)
Q Consensus 112 II~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~ 158 (387)
+.+-+|... .+.++.++++|++++=||++||+++.+.+.++.+|+
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 445555433 899999999999999999999988777777777665
No 51
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=63.74 E-value=7.1 Score=37.60 Aligned_cols=54 Identities=28% Similarity=0.454 Sum_probs=35.3
Q ss_pred CCHHHHHHHHHhCCceeEeecCCCCH----------HHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 121 NTREMIWKLAEAGMNVARLNMSHGDH----------ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 121 ~~~e~i~~Li~aGm~v~RiN~SHg~~----------e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
.+.+.|+.|.+.|+|.+||-+++... +.+.+.++.+=+... .+-+.+++|+-.-
T Consensus 43 ~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~---~~Gi~vildlH~~ 106 (345)
T 3ndz_A 43 TTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAF---DNDMYVIINLHHE 106 (345)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHH---TTTCEEEECCCSC
T ss_pred CcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHH---HCCCEEEEecCCc
Confidence 36899999999999999999886421 222233333222222 2347899999764
No 52
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=63.35 E-value=13 Score=35.85 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=45.1
Q ss_pred HHHHHhhHhcCCCEEEEcCCCC-----H-H--------HHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhhcCe
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKD-----A-Q--------VVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITASDG 342 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~s-----a-~--------dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~sDG 342 (387)
.++.+.+.+.|+|+|.++.--. . . .+..+.+..... ++.||+ -|-|..-+ +..+..=+|+
T Consensus 160 ~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv--~kalalGAda 235 (336)
T 1ypf_A 160 PEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDV--AKSIRFGATM 235 (336)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHH--HHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHH--HHHHHcCCCE
Confidence 4678889999999999964210 0 0 344444443322 688888 67776555 3333334999
Q ss_pred EEEcCCccc
Q 016564 343 AMVARGDLG 351 (387)
Q Consensus 343 ImIaRGDLg 351 (387)
+|+||.=|+
T Consensus 236 V~iGr~~l~ 244 (336)
T 1ypf_A 236 VMIGSLFAG 244 (336)
T ss_dssp EEESGGGTT
T ss_pred EEeChhhhc
Confidence 999999884
No 53
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=62.90 E-value=36 Score=32.09 Aligned_cols=97 Identities=12% Similarity=0.031 Sum_probs=57.7
Q ss_pred HHHHhhHhcCCCEEEEcC------CCCHHHH-HHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSF------VKDAQVV-HELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSf------V~sa~dV-~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++.- .=|.++= +-++...+..+++++||+-+ -|.++++......+. +|++|+-+-
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 455678889999998742 2233333 33444445556788999887 466777666665555 899998754
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... ..-+.+...-+.|. .+.+.|+.++
T Consensus 107 ~y~~-~~~~~l~~~f~~ia---~a~~lPiilY 134 (292)
T 3daq_A 107 YYNK-TNQRGLVKHFEAIA---DAVKLPVVLY 134 (292)
T ss_dssp CSSC-CCHHHHHHHHHHHH---HHHCSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHHH---HhCCCCEEEE
Confidence 4322 12233333334444 4447887433
No 54
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=62.80 E-value=14 Score=32.45 Aligned_cols=66 Identities=21% Similarity=0.242 Sum_probs=44.8
Q ss_pred HHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCCh-hhhhcHHHHHhh-cCeEEEcCC
Q 016564 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESA-DSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~-~gv~NL~eIl~~-sDGImIaRG 348 (387)
.++.+.+.|+|+|.++-.-..+++.++.+++++.|.. ++.-+-++ ...+.+..+.+. +|.|.+.+|
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g 136 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQ--VVVDMICVDDLPARVRLLEEAGADMLAVHTG 136 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE--EEEECTTCSSHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCe--EEEEecCCCCHHHHHHHHHHcCCCEEEEcCC
Confidence 3778889999999998766557788888888776543 33322122 124556777766 888887665
No 55
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=62.14 E-value=29 Score=33.12 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=59.6
Q ss_pred HHHHhhHhcCCCEEEEc-------CCCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS-------fV~sa~dV~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. .....|..+-++...+..++++.||+-+ -|.++++......+. +||+|+-+-
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 45567888999999884 2233344444444455556788899886 466777666665555 899999765
Q ss_pred cccc--cCCCCcHHHHHHHHHHHHHHCCCCccccc
Q 016564 349 DLGA--ELPIEEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 349 DLg~--elg~e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
.... -..-+.+. ...-..|.+.+.|+.++.
T Consensus 113 yy~~~~~~s~~~l~---~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 113 YHGATFRVPEAQIF---EFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp CBTTTBCCCHHHHH---HHHHHHHHHCSSCEEEEE
T ss_pred CCccCCCCCHHHHH---HHHHHHHHhcCCCEEEEe
Confidence 4321 12222333 344444556688874433
No 56
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=61.80 E-value=14 Score=36.64 Aligned_cols=94 Identities=13% Similarity=0.122 Sum_probs=56.0
Q ss_pred HHHHHhhHhcCCCEEEEcCCC------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh----cCeEEEcCC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVARG 348 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~------sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~----sDGImIaRG 348 (387)
.++.+.+.+.|+|+|.+|.-- .+..+..+.+..+..+.++.||+- -||.+-.+++++ +|++||||.
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~----GGI~~g~Dv~kalalGAd~V~iGr~ 338 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLD----GGVRKGTDVLKALALGAKAVFVGRP 338 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEEC----SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEE----CCCCCHHHHHHHHHhCCCeeEECHH
Confidence 567888999999999996421 122334444333333456888873 345555555544 899999996
Q ss_pred cccccC-----CCC-cHHHHHHHHHHHHHHCCCC
Q 016564 349 DLGAEL-----PIE-EVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 349 DLg~el-----g~e-~v~~~Qk~II~~c~aaGKp 376 (387)
=|-... |++ .+..+.+++-......|..
T Consensus 339 ~l~~~~~~g~~gv~~~l~~l~~el~~~m~~~G~~ 372 (392)
T 2nzl_A 339 IVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQ 372 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 554311 221 2344456666666666654
No 57
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=61.64 E-value=8 Score=39.40 Aligned_cols=52 Identities=25% Similarity=0.358 Sum_probs=34.3
Q ss_pred CHHHHHHHHHhCCceeEeecCCCC-----------HHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 122 TREMIWKLAEAGMNVARLNMSHGD-----------HASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SHg~-----------~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
+.+.|+.|.+.|+|++||-+++.. .+.+..+-+.|..+ . .+-+.+++||-..
T Consensus 47 t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a-~---~~Gi~vildlH~~ 109 (515)
T 3icg_A 47 THAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYA-F---DNDMYVIINLHHE 109 (515)
T ss_dssp CHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHH-H---TTTCEEEEECCSC
T ss_pred CHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHH-H---HCCCEEEEecCCC
Confidence 689999999999999999887532 22222222223322 2 2448899999765
No 58
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=61.09 E-value=14 Score=35.24 Aligned_cols=64 Identities=9% Similarity=0.068 Sum_probs=49.3
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhh--hhcHHHHHhh-cCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~g--v~NL~eIl~~-sDGImIaR 347 (387)
.+.++.+++.|+|+|++-.. ++++++++.+.+...+.+++ ||=--| .+|+.++++. +|+|.+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v~----ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTVM----LESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTCE----EEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeE----EEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 56778888999999999996 78899998888876444543 443333 4788898888 89999876
No 59
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=60.76 E-value=12 Score=38.14 Aligned_cols=50 Identities=22% Similarity=0.414 Sum_probs=42.2
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHH
Q 016564 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (387)
Q Consensus 109 ~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~ 158 (387)
+..+-+.+|....+.+.++.|+++|++++=||.+||....+.++++.+|+
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~ 266 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQ 266 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHH
Confidence 45566677777778899999999999999999999988877778877775
No 60
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=60.38 E-value=42 Score=28.93 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=41.7
Q ss_pred ecCCCEEEEEecC--CCC---CccEEEeccCCccc--ccCcCCEEEEe--CCe-EEEEEEEEeCCeEE
Q 016564 190 LTSGQEFTFTIQR--GVG---SAECVSVNYDDFVN--DVEVGDMLLVD--GGM-MSLLVKSKTEDSVK 247 (387)
Q Consensus 190 Lk~G~~v~lt~~~--~~g---~~~~i~v~~~~l~~--~v~~Gd~IliD--DG~-I~l~V~~v~~d~v~ 247 (387)
++.|++..|++.. .+| ......++-..|.. .+++|+.+.++ +|. +..+|.+++++.+.
T Consensus 47 m~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~ 114 (158)
T 3cgm_A 47 REEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVT 114 (158)
T ss_dssp CBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEE
T ss_pred CCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEE
Confidence 6789999998863 333 33445666666654 78999999997 465 46788999888664
No 61
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=60.36 E-value=11 Score=38.35 Aligned_cols=50 Identities=18% Similarity=0.291 Sum_probs=41.0
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHH
Q 016564 110 TKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (387)
Q Consensus 110 TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~ 159 (387)
..+.+.+|......+.++.++++|++++=||++||++..+.++++.+|+.
T Consensus 244 l~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 244 LLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 34556677666678999999999999999999999988777788887764
No 62
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=60.29 E-value=53 Score=30.93 Aligned_cols=99 Identities=7% Similarity=0.026 Sum_probs=59.2
Q ss_pred HHHHHhhHhcCCCEEEEc------CCCCHHHHHHH-HHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVS------FVKDAQVVHEL-KNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lS------fV~sa~dV~~l-~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaR 347 (387)
.+.+++.++.|+|+|++. +.-|.++=.++ +...+..+++++||+-+ -|.++++......+. +||+|+.+
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 345678889999999873 33344444444 44445556778898887 347777766666555 89999976
Q ss_pred CcccccCCCCcHHHHHHHHHHHHHHC---CCCcccc
Q 016564 348 GDLGAELPIEEVPLLQVVFISDIRAM---PRMSSSI 380 (387)
Q Consensus 348 GDLg~elg~e~v~~~Qk~II~~c~aa---GKp~g~i 380 (387)
-.......-+.+...-+. .|.+. ++|+.++
T Consensus 107 P~y~~~~s~~~l~~~f~~---va~a~p~~~lPiilY 139 (294)
T 3b4u_A 107 PSYFKNVSDDGLFAWFSA---VFSKIGKDARDILVY 139 (294)
T ss_dssp CCSSCSCCHHHHHHHHHH---HHHHHCTTCCCEEEE
T ss_pred CcCCCCCCHHHHHHHHHH---HHHhcCCCCCcEEEE
Confidence 554321122233333333 34455 6787433
No 63
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=60.04 E-value=37 Score=33.89 Aligned_cols=93 Identities=19% Similarity=0.216 Sum_probs=53.5
Q ss_pred HHHHHhhHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhcHHHHHhh-cCeEEEcC--Ccccc
Q 016564 279 WDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVAR--GDLGA 352 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~l--SfV~sa~dV~~l~~~L~~~g~~i~IIA-KIEt~~gv~NL~eIl~~-sDGImIaR--GDLg~ 352 (387)
.+.++.+++.|+|+|.+ ++-.+....+.++. +.+.- ++.|++ .+=|.+.. ..+.++ +|+|.++- |....
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~-ik~~~-~i~Vi~g~V~t~e~A---~~a~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSKM-NIDVIVGNVVTEEAT---KELIENGADGIKVGIGPGSICT 220 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHH-HHTTC-CCEEEEEEECSHHHH---HHHHHTTCSEEEECC-------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHH-HHhcC-CCeEEEeecCCHHHH---HHHHHcCCCEEEEeCCCCcCcc
Confidence 56788899999999987 66655433444433 33322 577886 56665544 334444 89999953 22211
Q ss_pred -----cCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 353 -----ELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 353 -----elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
..+.. ...+-.++.+++++.++|+
T Consensus 221 tr~~~g~g~p-~~~al~~v~~~~~~~~IPV 249 (400)
T 3ffs_A 221 TRIVAGVGVP-QITAIEKCSSVASKFGIPI 249 (400)
T ss_dssp --CCSCBCCC-HHHHHHHHHHHHTTTTCCE
T ss_pred cccccccchh-HHHHHHHHHHHHHhcCCCE
Confidence 01222 2234456666676778887
No 64
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=59.91 E-value=40 Score=33.11 Aligned_cols=99 Identities=10% Similarity=-0.019 Sum_probs=58.4
Q ss_pred CCCcccHHHH-HhhHhcCCCEEEEcCCCC-----------------------HHHHHHHHHHHHhcCCCceEEEe--cCC
Q 016564 273 SITEKDWDDI-KFGVDNKVDFYAVSFVKD-----------------------AQVVHELKNYLKSCGADIHVIVK--IES 326 (387)
Q Consensus 273 ~LTe~D~~dI-~~a~~~gvD~I~lSfV~s-----------------------a~dV~~l~~~L~~~g~~i~IIAK--IEt 326 (387)
.+++.|..++ +.+.+.|+|+|.++..-. +..++.++++-+..+.++.||+- |.|
T Consensus 230 ~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s 309 (367)
T 3zwt_A 230 DLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSS 309 (367)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCC
Confidence 4565554444 556789999999874320 11223333333333456788865 776
Q ss_pred hhhhhcHHHHHh-hcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCC
Q 016564 327 ADSIPNLHSIIT-ASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 327 ~~gv~NL~eIl~-~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp 376 (387)
.+-. .+.+. -+|+||+||+=|-- |..-+..+.+.+-....+.|..
T Consensus 310 ~~da---~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~~ 355 (367)
T 3zwt_A 310 GQDA---LEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGFG 355 (367)
T ss_dssp HHHH---HHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHH---HHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCCC
Confidence 5444 23333 38999999986521 3334455666677777777754
No 65
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=59.80 E-value=23 Score=34.66 Aligned_cols=71 Identities=15% Similarity=0.210 Sum_probs=43.3
Q ss_pred HHHHHhhHhcCCCEEEEcC------------CCCHHHHHHHHHH----HHhcCCC-ceEEEe--cCChhhhhcHHHHHhh
Q 016564 279 WDDIKFGVDNKVDFYAVSF------------VKDAQVVHELKNY----LKSCGAD-IHVIVK--IESADSIPNLHSIITA 339 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSf------------V~sa~dV~~l~~~----L~~~g~~-i~IIAK--IEt~~gv~NL~eIl~~ 339 (387)
.++.+.+.+.|+|+|.++. +-+.+.+.++++. +.+.+.+ +.||+- |-|..-+ +..+..=
T Consensus 222 ~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv--~kalalG 299 (393)
T 2qr6_A 222 YTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDV--VKAIACG 299 (393)
T ss_dssp HHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHH--HHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHH--HHHHHcC
Confidence 4567888899999999976 3334444444444 2323433 888873 5554333 2222223
Q ss_pred cCeEEEcCCccc
Q 016564 340 SDGAMVARGDLG 351 (387)
Q Consensus 340 sDGImIaRGDLg 351 (387)
+|++++||.=|.
T Consensus 300 A~~V~iG~~~l~ 311 (393)
T 2qr6_A 300 ADAVVLGSPLAR 311 (393)
T ss_dssp CSEEEECGGGGG
T ss_pred CCEEEECHHHHc
Confidence 899999998433
No 66
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=59.46 E-value=91 Score=30.59 Aligned_cols=98 Identities=11% Similarity=0.138 Sum_probs=58.6
Q ss_pred cccHHHHHhhHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhcHHHHHhhcCeEEEc--CCcc
Q 016564 276 EKDWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITASDGAMVA--RGDL 350 (387)
Q Consensus 276 e~D~~dI~~a~~~gvD~I~l--SfV~sa~dV~~l~~~L~~~g~~i~IIA-KIEt~~gv~NL~eIl~~sDGImIa--RGDL 350 (387)
+.+.+.++.+++.|+|+|.+ ++..+...+..++. +.+...++.|++ .+-|++....+.+ .=+|+|.+| +|--
T Consensus 107 ~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~-ik~~~p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gpGs~ 183 (366)
T 4fo4_A 107 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGSI 183 (366)
T ss_dssp TTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTT
T ss_pred hhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHH-HHHhcCCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCCCCC
Confidence 34677888999999999987 55555544444444 333334567765 5777776555433 138999995 2221
Q ss_pred cc-----cCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 351 GA-----ELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 351 g~-----elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
.. ..|...+ ..-..+.++|++.++|+
T Consensus 184 ~~tr~~~g~g~p~~-~~l~~v~~~~~~~~iPV 214 (366)
T 4fo4_A 184 CTTRIVTGVGVPQI-TAIADAAGVANEYGIPV 214 (366)
T ss_dssp BCHHHHHCCCCCHH-HHHHHHHHHHGGGTCCE
T ss_pred CCcccccCcccchH-HHHHHHHHHHhhcCCeE
Confidence 10 1222222 23345666677788887
No 67
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=58.36 E-value=52 Score=29.04 Aligned_cols=85 Identities=18% Similarity=0.227 Sum_probs=50.7
Q ss_pred HHHHHhhHhcCCCEEEEcCCCC--------HHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhh-cCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKD--------AQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~s--------a~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~-sDGImIaR 347 (387)
.+++..+.+.|+|+|.++-+-. +.++..++++.... ++++++ =| | .+|+.+++++ +||+.+++
T Consensus 120 ~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~---~~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 120 LEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-T---PDRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp HHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-C---GGGHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-C---HHHHHHHHHcCCCEEEEhH
Confidence 4556777889999999976521 12445555544333 445554 36 4 3677787777 89999998
Q ss_pred CcccccCCCCcHHHHHHHHHHHHHHC
Q 016564 348 GDLGAELPIEEVPLLQVVFISDIRAM 373 (387)
Q Consensus 348 GDLg~elg~e~v~~~Qk~II~~c~aa 373 (387)
+=+.. ++....-+.+.++.++.
T Consensus 194 ~i~~~----~d~~~~~~~~~~~~~~~ 215 (221)
T 1yad_A 194 GIFSS----AEPLEAARRYSRKLKEM 215 (221)
T ss_dssp HHHTS----SSHHHHHHHHHHHHHHH
T ss_pred HhhCC----CCHHHHHHHHHHHHHHh
Confidence 75543 23333444444444443
No 68
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=58.35 E-value=34 Score=32.68 Aligned_cols=98 Identities=9% Similarity=0.074 Sum_probs=58.9
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHHHHH-HHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHE-LKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~dV~~-l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.=+.++=.+ ++...+..+++++||+-+= |.++++......+. +|++|+-+-
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567788999999884 2224444433 4444555567888998873 57777776666555 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
.... ..-+.+ ....-..|.+.+.|+.++.
T Consensus 128 ~y~~-~s~~~l---~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 128 YYNK-PTQEGM---YQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp CSSC-CCHHHH---HHHHHHHHHHSCSCEEEEE
T ss_pred CCCC-CCHHHH---HHHHHHHHHhcCCCEEEEe
Confidence 3321 111223 3344444555688875443
No 69
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=57.99 E-value=24 Score=33.13 Aligned_cols=100 Identities=11% Similarity=-0.034 Sum_probs=57.6
Q ss_pred CCcccHHH-HHhhHhcCCCEEEEcCCCCHH------HHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEE
Q 016564 274 ITEKDWDD-IKFGVDNKVDFYAVSFVKDAQ------VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (387)
Q Consensus 274 LTe~D~~d-I~~a~~~gvD~I~lSfV~sa~------dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImI 345 (387)
++..++.. ++.+.+.|++.|-+.+-.+++ +..++-+.+.+. .++++.+.+-+ .+.++..+++ .|.|+|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n---~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPN---MKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS---HHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCC---HHHHHHHHHCCCCEEEE
Confidence 55566444 456666899999885533333 333333333322 35666666633 3334444444 677777
Q ss_pred c--CCcccc----cCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 346 A--RGDLGA----ELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 346 a--RGDLg~----elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
. -.|.-. ..+.++....-+++++.|+++|+.+
T Consensus 99 ~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V 136 (295)
T 1ydn_A 99 FISASEGFSKANINCTIAESIERLSPVIGAAINDGLAI 136 (295)
T ss_dssp EEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 2 111111 2455666677789999999999986
No 70
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=57.77 E-value=33 Score=30.24 Aligned_cols=84 Identities=11% Similarity=-0.009 Sum_probs=50.7
Q ss_pred HHHHHhhHhcCCCEEEEcCCC--------CHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK--------DAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~--------sa~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIaR 347 (387)
.+.++.+.+.|+|+|.+.-+. +.+.+.++++. . ++.|++- |-+ .+|+.+++++ +||+++|+
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~---~--~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgs 228 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS---V--RIPVIASGGAGR---VEHFYEAAAAGADAVLAAS 228 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH---C--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh---c--CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHH
Confidence 345677788999999875443 23444444433 2 4556653 343 3566666666 89999998
Q ss_pred CcccccCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 348 GDLGAELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 348 GDLg~elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
+=+....+ .+++.+..+++|.++
T Consensus 229 al~~~~~~-------~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 229 LFHFRVLS-------IAQVKRYLKERGVEV 251 (253)
T ss_dssp HHHTTSSC-------HHHHHHHHHHTTCBC
T ss_pred HHHcCCCC-------HHHHHHHHHHcCCCC
Confidence 65544333 234555567777654
No 71
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=57.43 E-value=20 Score=33.05 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=34.7
Q ss_pred CCHHHHHHHH-HhCCceeEeecCCC---------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 121 NTREMIWKLA-EAGMNVARLNMSHG---------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 121 ~~~e~i~~Li-~aGm~v~RiN~SHg---------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
.+.+.++.|. +.|+|++|+-+... +++.+.+.++.+=+...+. -+.+++|+-+
T Consensus 39 ~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~---Gi~vild~h~ 101 (293)
T 1tvn_A 39 YTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAE---DMYVIIDFHS 101 (293)
T ss_dssp CSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHT---TCEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHC---CCEEEEEcCC
Confidence 4678999998 49999999988762 3344444444433333333 3678888865
No 72
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=57.15 E-value=44 Score=29.29 Aligned_cols=59 Identities=22% Similarity=0.455 Sum_probs=43.0
Q ss_pred ecCCCEEEEEecC--CCC---CccEEEeccCCccc--ccCcCCEEEEe--CC-eEEEEEEEEeCCeEEE
Q 016564 190 LTSGQEFTFTIQR--GVG---SAECVSVNYDDFVN--DVEVGDMLLVD--GG-MMSLLVKSKTEDSVKC 248 (387)
Q Consensus 190 Lk~G~~v~lt~~~--~~g---~~~~i~v~~~~l~~--~v~~Gd~IliD--DG-~I~l~V~~v~~d~v~c 248 (387)
++.|++.+|++.. .+| .+....++-..|.. .+++|+.+.+. +| .+..+|++++++.|..
T Consensus 75 m~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~v 143 (169)
T 4dt4_A 75 LKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITV 143 (169)
T ss_dssp CCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEE
Confidence 6789999998864 344 23455666666654 58999999996 45 4788999999987653
No 73
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=56.79 E-value=10 Score=39.70 Aligned_cols=52 Identities=25% Similarity=0.389 Sum_probs=43.4
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHH
Q 016564 108 RKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (387)
Q Consensus 108 r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~ 159 (387)
.+-.+=+.+|-...+.|....|+++|+|++=|..+||..+...++++.+|+.
T Consensus 268 grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~ 319 (556)
T 4af0_A 268 KQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQT 319 (556)
T ss_dssp CCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred hceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhh
Confidence 3455666777665678999999999999999999999999988888888863
No 74
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=56.44 E-value=82 Score=32.91 Aligned_cols=100 Identities=12% Similarity=0.112 Sum_probs=66.8
Q ss_pred CCcccHHHHHhhHhcCCCEEEEc--CCCCHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhcHHHHHhhcCeEEEcCCcc
Q 016564 274 ITEKDWDDIKFGVDNKVDFYAVS--FVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITASDGAMVARGDL 350 (387)
Q Consensus 274 LTe~D~~dI~~a~~~gvD~I~lS--fV~sa~dV~~l~~~L~~~g~~i~IIA-KIEt~~gv~NL~eIl~~sDGImIaRGDL 350 (387)
.++.+.+.+...++.|+|+|++- .-.+...++ ..+++++...++.||| .+-|.++..+|-+ +=+|+|-||-|==
T Consensus 278 v~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~-~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpG 354 (556)
T 4af0_A 278 TRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIE-FIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSG 354 (556)
T ss_dssp SSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHH-HHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred cCccHHHHHHHHHhcCCcEEEEeccccccHHHHH-HHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCC
Confidence 45567888888899999998874 334444444 4445666666777775 8999999877644 3499999866542
Q ss_pred ccc-------CCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 351 GAE-------LPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 351 g~e-------lg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
++- +|... ..+...+.++|+.+|+|+
T Consensus 355 SiCtTr~v~GvG~PQ-~tAi~~~a~~a~~~~vpv 387 (556)
T 4af0_A 355 SICITQEVMAVGRPQ-GTAVYAVAEFASRFGIPC 387 (556)
T ss_dssp TTBCCTTTCCSCCCH-HHHHHHHHHHHGGGTCCE
T ss_pred cccccccccCCCCcH-HHHHHHHHHHHHHcCCCE
Confidence 221 22222 234456678888999997
No 75
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=56.03 E-value=21 Score=33.12 Aligned_cols=68 Identities=7% Similarity=0.144 Sum_probs=42.4
Q ss_pred ccHHHHHhhHhcCCCEEEEcCC------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh---cCeEEEcC
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFV------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA---SDGAMVAR 347 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV------~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~---sDGImIaR 347 (387)
++++.+..+.+.|+|+|.+... -+.+...++...+...+.++.++| |+ |+.+.+++... +||++||.
T Consensus 162 ~~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIA--eg--GI~s~~dv~~l~~Ga~gvlVGs 237 (254)
T 1vc4_A 162 HTERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVA--ES--GYSRKEELKALEGLFDAVLIGT 237 (254)
T ss_dssp CSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEE--ES--CCCSHHHHHTTTTTCSEEEECH
T ss_pred CCHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEE--Ec--CCCCHHHHHHHHcCCCEEEEeH
Confidence 3455677888899999988543 233444445555433222566777 43 66666666555 78999975
Q ss_pred C
Q 016564 348 G 348 (387)
Q Consensus 348 G 348 (387)
+
T Consensus 238 A 238 (254)
T 1vc4_A 238 S 238 (254)
T ss_dssp H
T ss_pred H
Confidence 3
No 76
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=55.95 E-value=20 Score=35.10 Aligned_cols=96 Identities=11% Similarity=0.134 Sum_probs=53.5
Q ss_pred HHHHHhhHhcCCCEEEEcCCCC------HHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhhcCeEEEcCCcc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKD------AQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITASDGAMVARGDL 350 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~s------a~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~sDGImIaRGDL 350 (387)
.++++.+.+.|+|+|.++.--. ..++..+.+.....+.++.||+- |-|.+-+ +.-+..=+|+++|||.=|
T Consensus 236 ~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~--~k~l~~GAdaV~iGr~~l 313 (370)
T 1gox_A 236 AEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDV--FKALALGAAGVFIGRPVV 313 (370)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHH--HHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHH--HHHHHcCCCEEeecHHHH
Confidence 4678889999999999965211 12334444433333446777764 5554322 222222389999999654
Q ss_pred ccc--CCCC----cHHHHHHHHHHHHHHCCCC
Q 016564 351 GAE--LPIE----EVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 351 g~e--lg~e----~v~~~Qk~II~~c~aaGKp 376 (387)
-.. -|.+ .+..+.+++-..+...|..
T Consensus 314 ~~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~ 345 (370)
T 1gox_A 314 FSLAAEGEAGVKKVLQMMRDEFELTMALSGCR 345 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 221 1221 2334445666666666653
No 77
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=55.88 E-value=86 Score=29.54 Aligned_cols=97 Identities=9% Similarity=0.037 Sum_probs=58.4
Q ss_pred HHHHhhHhcCCCEEEEcC-------CCCHHHHHHHHHHHHhcCC-CceEEEec---CChhhhhcHHHHHhh-cCeEEEcC
Q 016564 280 DDIKFGVDNKVDFYAVSF-------VKDAQVVHELKNYLKSCGA-DIHVIVKI---ESADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSf-------V~sa~dV~~l~~~L~~~g~-~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaR 347 (387)
+.+++.++.|+|+|++.- ....|..+-++...+..++ +++||+-+ -|.++++......+. +|++|+-+
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 445678889999998742 2233333444444555567 89999887 366666666665555 89998865
Q ss_pred CcccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 348 GDLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 348 GDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
-.... .. -..+.+..-..|.+.+.|+.++
T Consensus 112 P~y~~-~s---~~~l~~~f~~va~a~~lPiilY 140 (301)
T 3m5v_A 112 PYYNK-PT---QQGLYEHYKAIAQSVDIPVLLY 140 (301)
T ss_dssp CCSSC-CC---HHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCC-CC---HHHHHHHHHHHHHhCCCCEEEE
Confidence 44321 11 1233344444555668887443
No 78
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=55.86 E-value=10 Score=36.67 Aligned_cols=54 Identities=26% Similarity=0.396 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHhCCceeEeecCCCCH---------HHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 121 NTREMIWKLAEAGMNVARLNMSHGDH---------ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 121 ~~~e~i~~Li~aGm~v~RiN~SHg~~---------e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
.+.+.++.|.+.|+|++||-++.... +.+.+.++.+=+... .+-+.+++|+-..
T Consensus 62 ~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~---~~Gi~vild~H~~ 124 (380)
T 1edg_A 62 TTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCI---DNKMYVILNTHHD 124 (380)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHH---TTTCEEEEECCSC
T ss_pred ccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHH---HCCCEEEEeCCCc
Confidence 46889999999999999998865321 222223332222222 2347899999864
No 79
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=55.79 E-value=49 Score=28.15 Aligned_cols=59 Identities=19% Similarity=0.188 Sum_probs=42.1
Q ss_pred ecCCCEEEEEecC--CCC---CccEEEeccCCcc-cccCcCCEEEEe--CCe-EEEEEEEEeCCeEEE
Q 016564 190 LTSGQEFTFTIQR--GVG---SAECVSVNYDDFV-NDVEVGDMLLVD--GGM-MSLLVKSKTEDSVKC 248 (387)
Q Consensus 190 Lk~G~~v~lt~~~--~~g---~~~~i~v~~~~l~-~~v~~Gd~IliD--DG~-I~l~V~~v~~d~v~c 248 (387)
++.|++..|++.. .+| ......++-..|- ..+++|+.+.+. +|. +..+|.+++++.|..
T Consensus 57 m~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~v 124 (151)
T 2kr7_A 57 AQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMV 124 (151)
T ss_dssp CCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEE
T ss_pred CCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEE
Confidence 6789999998853 333 3344556666662 368999999996 575 678899999887653
No 80
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=55.36 E-value=60 Score=30.77 Aligned_cols=97 Identities=7% Similarity=-0.017 Sum_probs=57.0
Q ss_pred HHHHhhHhcCCCEEEEcC-------CCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcC-
Q 016564 280 DDIKFGVDNKVDFYAVSF-------VKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVAR- 347 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSf-------V~sa~dV~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaR- 347 (387)
+.+++.++.|+|+|++.- ....|..+-++...+..++++.||+-+ -|.++++......+. +|++|+-+
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 355677889999998643 233344444444455567788999877 556666666655555 89999853
Q ss_pred CcccccCCCCcHHHHHHHHHHHHHHCCCCccc
Q 016564 348 GDLGAELPIEEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 348 GDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
........-+.+...-+. .|.+.+.|+.+
T Consensus 119 ~y~~~~~s~~~l~~~f~~---ia~a~~lPiil 147 (307)
T 3s5o_A 119 CYYRGRMSSAALIHHYTK---VADLSPIPVVL 147 (307)
T ss_dssp CTTGGGCCHHHHHHHHHH---HHHHCSSCEEE
T ss_pred CcCCCCCCHHHHHHHHHH---HHhhcCCCEEE
Confidence 333212222333333333 35566788743
No 81
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=55.33 E-value=7.8 Score=31.70 Aligned_cols=65 Identities=8% Similarity=-0.007 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCcccccc
Q 016564 303 VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKA 382 (387)
Q Consensus 303 dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~ 382 (387)
=+..++++.++.|-++.++| .++..+++.+.-.|.|++|| .+.+..+++-+.|...|+|+..|+.
T Consensus 22 lv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLgP----------QV~y~~~~ik~~~~~~~ipV~vI~~ 86 (108)
T 3nbm_A 22 LANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILAP----------QVRSYYREMKVDAERLGIQIVATRG 86 (108)
T ss_dssp HHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEECG----------GGGGGHHHHHHHHTTTTCEEEECCH
T ss_pred HHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEECh----------HHHHHHHHHHHHhhhcCCcEEEeCH
Confidence 45666777777777777776 23334666677789999985 4666778888889999999877774
No 82
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=55.28 E-value=74 Score=30.14 Aligned_cols=97 Identities=20% Similarity=0.074 Sum_probs=57.8
Q ss_pred HHHHhhHhcCCCEEEEcCC------CCHHHH-HHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSFV------KDAQVV-HELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV------~sa~dV-~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++.-. =|.++= +-++...+..+++++||+-+ -|.++++......+. +|++|+-+-
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 4556788899999887422 233433 33444455557788999887 456666666655555 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... . .-..+....-..|.+.++|+.++
T Consensus 120 ~y~~-~---s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 120 YYSK-P---PQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp CSSC-C---CHHHHHHHHHHHHTSCSSCEEEE
T ss_pred CCCC-C---CHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 1 12233344445555667887444
No 83
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=55.01 E-value=24 Score=32.42 Aligned_cols=62 Identities=15% Similarity=0.170 Sum_probs=47.9
Q ss_pred HHHhhHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEE
Q 016564 281 DIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV 345 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~-sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImI 345 (387)
.++.+.+.|+|+|.+..-. + .++.++.+.+++.|....+...-.|+ ++.+++++...|-|++
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~Vlv 134 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETIN-GQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITV 134 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEE
T ss_pred HHHHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEE
Confidence 3677788999999998654 4 46788888888888777666666676 6678888888998876
No 84
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=54.67 E-value=21 Score=33.75 Aligned_cols=67 Identities=10% Similarity=0.038 Sum_probs=41.3
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCC---HHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHH---HHhh-cCeEEEcCC
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKD---AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHS---IITA-SDGAMVARG 348 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~s---a~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~e---Il~~-sDGImIaRG 348 (387)
+.+.++.+++.|+|+|.+....- .-|+....+++.....++.+|+ |+ |+.+.++ +.++ +||++||.+
T Consensus 178 ~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIa--es--GI~t~edv~~l~~~Ga~gvLVG~a 251 (272)
T 3tsm_A 178 DEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVG--ES--GIFTHEDCLRLEKSGIGTFLIGES 251 (272)
T ss_dssp SHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEE--ES--SCCSHHHHHHHHTTTCCEEEECHH
T ss_pred CHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEE--EC--CCCCHHHHHHHHHcCCCEEEEcHH
Confidence 67778889999999999984330 1134444555544444566665 33 4444444 3444 899999843
No 85
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=54.41 E-value=33 Score=32.19 Aligned_cols=64 Identities=13% Similarity=0.187 Sum_probs=47.7
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIaR 347 (387)
.+.+..+++.|+|+|.++.. ++++++++.+.+.....+++|.|- | -.+|+.+++++ +|+|-+|.
T Consensus 192 lee~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 192 FEEAKNAMNAGADIVMCDNL-SVLETKEIAAYRDAHYPFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHHHHHTCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 45677788999999999875 689999888888654445555443 3 35788888887 89887764
No 86
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=54.28 E-value=23 Score=33.85 Aligned_cols=65 Identities=15% Similarity=0.166 Sum_probs=48.6
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhh--hhcHHHHHhh-cCeEEEcC
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~g--v~NL~eIl~~-sDGImIaR 347 (387)
+.+.++.+++.|+|+|.+... ++++++++.+.+...+.++++.|- -| .+|+.++++. +|+|-+|.
T Consensus 202 tleea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieAS----GGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEVS----GGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEE----ECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEEE----CCCCHHHHHHHHHcCCCEEEEeH
Confidence 467788889999999999996 889999988888754445544332 22 4677777777 89999976
No 87
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=54.22 E-value=43 Score=30.56 Aligned_cols=90 Identities=12% Similarity=0.052 Sum_probs=48.9
Q ss_pred ccHHHHHhhHhcCCCEEEE--cCCC--------------------CHHHHHHHHHHHHhcCCCceEEEec-CChhhhhcH
Q 016564 277 KDWDDIKFGVDNKVDFYAV--SFVK--------------------DAQVVHELKNYLKSCGADIHVIVKI-ESADSIPNL 333 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~l--SfV~--------------------sa~dV~~l~~~L~~~g~~i~IIAKI-Et~~gv~NL 333 (387)
.-.+.++.+.+.|+|+|-+ ||.. +.+...++-+.+.+. .+++++.+. .++.-...+
T Consensus 33 ~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~~ 111 (262)
T 1rd5_A 33 TTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRSL 111 (262)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSCCT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHHHH
Confidence 3455677778899999777 4431 223222222233322 356677764 222111123
Q ss_pred HHHHhh-cCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 334 HSIITA-SDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 334 ~eIl~~-sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
+...++ +||+++. |+.. ++ -.+++..|+++|...
T Consensus 112 ~~a~~aGadgv~v~--d~~~----~~----~~~~~~~~~~~g~~~ 146 (262)
T 1rd5_A 112 AKMKEAGVHGLIVP--DLPY----VA----AHSLWSEAKNNNLEL 146 (262)
T ss_dssp HHHHHTTCCEEECT--TCBT----TT----HHHHHHHHHHTTCEE
T ss_pred HHHHHcCCCEEEEc--CCCh----hh----HHHHHHHHHHcCCce
Confidence 334444 8999983 5554 32 346667788888765
No 88
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=54.19 E-value=13 Score=33.71 Aligned_cols=89 Identities=12% Similarity=0.237 Sum_probs=63.7
Q ss_pred ccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh------cCeEEEcCCcc
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA------SDGAMVARGDL 350 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~------sDGImIaRGDL 350 (387)
+|.++++.+++..+++|++.+. +-..+.++.+.+++.|+ .++.-++..+|+.+=+.=+.. .|||+
T Consensus 17 r~~~~l~~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGII------ 87 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVMLET-HVAQLKALVKYAQAGGK--KVLLHADLVNGLKNDDYAIDFLCTEICPDGII------ 87 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEECSE-ETTTHHHHHHHHHHTTC--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEE------
T ss_pred cCHHHHHHHHcCCCCEEEEecC-cHHHHHHHHHHHHHcCC--eEEEecCchhccCCcHHHHHHHHhCCCCCEEE------
Confidence 5778899999999999999997 55677777777777776 455688888887652222221 56766
Q ss_pred cccCCCCcHHHHHHHHHHHHHHCCCCccccccceec
Q 016564 351 GAELPIEEVPLLQVVFISDIRAMPRMSSSIKAFYLL 386 (387)
Q Consensus 351 g~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~~~~ 386 (387)
-.+...+..+++.|..+ |--.|++
T Consensus 88 ----------sTk~~~i~~Ak~~gL~t--IqR~Fli 111 (192)
T 3kts_A 88 ----------STRGNAIMKAKQHKMLA--IQRLFMI 111 (192)
T ss_dssp ----------ESCHHHHHHHHHTTCEE--EEEEECC
T ss_pred ----------eCcHHHHHHHHHCCCeE--EEEEEEE
Confidence 35667888888888877 6666543
No 89
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=54.18 E-value=21 Score=35.03 Aligned_cols=91 Identities=9% Similarity=0.020 Sum_probs=53.0
Q ss_pred HHHHHhhHhcCCCEEEEcCC---------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh----cCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFV---------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV---------~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~----sDGImI 345 (387)
.++.+.+.+.|+|+|.+|.- -+.+-+.++++.+ +.++.||+- -||.+-.+++++ +|++||
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v---~~~ipVia~----GGI~~g~D~~kalalGAd~V~i 312 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERV---NKRVPIVFD----SGVRRGEHVAKALASGADVVAL 312 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH---TTSSCEEEC----SSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh---CCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEE
Confidence 46788889999999999751 2233444444433 446777764 244444444443 899999
Q ss_pred cCCcccccC-----CCC-cHHHHHHHHHHHHHHCCCC
Q 016564 346 ARGDLGAEL-----PIE-EVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 346 aRGDLg~el-----g~e-~v~~~Qk~II~~c~aaGKp 376 (387)
||.=|-... |++ .+..+.+++-......|..
T Consensus 313 Gr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 349 (368)
T 2nli_A 313 GRPVLFGLALGGWQGAYSVLDYFQKDLTRVMQLTGSQ 349 (368)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 996543311 221 2344455666666666643
No 90
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=53.35 E-value=63 Score=32.98 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=58.4
Q ss_pred CcccHHHHHhhHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhcHHHHHhh-cCeEEEcCCccc
Q 016564 275 TEKDWDDIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDLG 351 (387)
Q Consensus 275 Te~D~~dI~~a~~~gvD~I~lSfV~-sa~dV~~l~~~L~~~g~~i~IIA-KIEt~~gv~NL~eIl~~-sDGImIaRGDLg 351 (387)
++...+.+...++.|+|.|.+.... ..+.+.++-+.+.+...++.|++ .+-|.+....+ .++ +|+|.+|-|-=+
T Consensus 254 ~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~---~~aGad~i~vg~g~gs 330 (511)
T 3usb_A 254 TADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKAL---IEAGANVVKVGIGPGS 330 (511)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHH---HHHTCSEEEECSSCST
T ss_pred ccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHH---HHhCCCEEEECCCCcc
Confidence 3445777888899999999986443 22333333334444334566665 67766654433 333 899998543211
Q ss_pred c-------cCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 352 A-------ELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 352 ~-------elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
. .+|... ...-..+.++|++.++|+
T Consensus 331 i~~~~~~~g~g~p~-~~~l~~v~~~~~~~~iPV 362 (511)
T 3usb_A 331 ICTTRVVAGVGVPQ-LTAVYDCATEARKHGIPV 362 (511)
T ss_dssp TCCHHHHHCCCCCH-HHHHHHHHHHHHTTTCCE
T ss_pred ccccccccCCCCCc-HHHHHHHHHHHHhCCCcE
Confidence 1 122222 334456777888889997
No 91
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=53.15 E-value=36 Score=31.26 Aligned_cols=54 Identities=22% Similarity=0.366 Sum_probs=43.2
Q ss_pred EEeccC-CcccccCcCCEEEEeCCeEEEEEEEEeCCeEEEEEE-------ECcEecCCcceeeC
Q 016564 210 VSVNYD-DFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVV-------DGGELKSRRHLNVR 265 (387)
Q Consensus 210 i~v~~~-~l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V~-------~gG~L~s~KgVn~p 265 (387)
+.+..+ .+.+.+..||.|-+|. ++|+|.+++++.+.+.+. +=|.++.+..||+.
T Consensus 24 l~i~~~~~~~~~l~~g~SIAvnG--vcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLE 85 (213)
T 1i8d_A 24 HVVELPDHMLDGLETGASVAHNG--CCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVE 85 (213)
T ss_dssp EEEECCGGGTTTCCTTCEEEETT--EEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEE
T ss_pred EEEEEChHHhccCCCCcEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeC
Confidence 444443 5678999999999997 999999999999888876 44677778888874
No 92
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=52.99 E-value=14 Score=35.67 Aligned_cols=52 Identities=19% Similarity=0.211 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHhCCceeEeecCCCC-----------HHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 121 NTREMIWKLAEAGMNVARLNMSHGD-----------HASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 121 ~~~e~i~~Li~aGm~v~RiN~SHg~-----------~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
.+.+.++.|.+.|+|++||-++... .+....+-+.|..+ . .+-+.+++|+-.
T Consensus 63 ~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a-~---~~Gi~vildlH~ 125 (376)
T 3ayr_A 63 TTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYP-Y---KNGAFVILNLHH 125 (376)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHH-H---TTTCEEEEECCS
T ss_pred CcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHH-H---HCCCEEEEECCC
Confidence 4688999999999999999887531 11122222223222 2 234789999976
No 93
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=52.42 E-value=23 Score=32.38 Aligned_cols=54 Identities=19% Similarity=0.339 Sum_probs=43.8
Q ss_pred EEeccCCcccccCcCCEEEEeCCeEEEEEEEEeCCeEEEEEE-------ECcEecCCcceeeC
Q 016564 210 VSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVV-------DGGELKSRRHLNVR 265 (387)
Q Consensus 210 i~v~~~~l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V~-------~gG~L~s~KgVn~p 265 (387)
+.+..+.+.+.+..||.|-+|. ++|+|.+++++.+.+.+. +=|.++.+..||+-
T Consensus 25 l~i~~~~~~~~l~~g~SIAvnG--vcLTV~~~~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLE 85 (208)
T 1kzl_A 25 MKIEAPQILDDCHTGDSIAVNG--TCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLE 85 (208)
T ss_dssp EEEECGGGCTTCCTTCEEEETT--EEEEEEEECSSEEEEEECHHHHHHSSGGGCCTTCEEEEE
T ss_pred EEEechHHhcccCCCCEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhccccccCCCCEEEec
Confidence 4444455778999999999997 999999999998888774 45777888889974
No 94
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=52.19 E-value=30 Score=34.82 Aligned_cols=69 Identities=16% Similarity=0.146 Sum_probs=43.9
Q ss_pred cHHHHHhhHhcCCCEEEEcC---------------CCCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhhc
Q 016564 278 DWDDIKFGVDNKVDFYAVSF---------------VKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITAS 340 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSf---------------V~sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~s 340 (387)
+.++.+.+.+.|+|+|.++. .-...-+.++.+.+. +.++.||| .|-|..-+. ..+..=+
T Consensus 288 t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~--~~~ipvia~GGI~~~~di~--kala~GA 363 (494)
T 1vrd_A 288 TPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVAR--KYDVPIIADGGIRYSGDIV--KALAAGA 363 (494)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHH--TTTCCEEEESCCCSHHHHH--HHHHTTC
T ss_pred CHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHh--hcCCCEEEECCcCCHHHHH--HHHHcCC
Confidence 34566778899999999854 123334444444443 23678888 777765552 2222239
Q ss_pred CeEEEcCCcc
Q 016564 341 DGAMVARGDL 350 (387)
Q Consensus 341 DGImIaRGDL 350 (387)
|++++||.=+
T Consensus 364 d~V~iGr~~l 373 (494)
T 1vrd_A 364 ESVMVGSIFA 373 (494)
T ss_dssp SEEEESHHHH
T ss_pred CEEEECHHHh
Confidence 9999998765
No 95
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=51.79 E-value=19 Score=33.97 Aligned_cols=70 Identities=13% Similarity=0.087 Sum_probs=44.1
Q ss_pred ccHHHHHhhHhcCCCEEEEcCCCC---HHHHHHHHHHHHhcCCCceEEEecCC-hhhhhcHHHHHhh-cCeEEEcCC
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFVKD---AQVVHELKNYLKSCGADIHVIVKIES-ADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV~s---a~dV~~l~~~L~~~g~~i~IIAKIEt-~~gv~NL~eIl~~-sDGImIaRG 348 (387)
++.+.+..+.+.|+|+|.+...+- .-++..++++......++.++| |. ....+++.++.++ +||++||.+
T Consensus 170 ~t~ee~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVa--egGI~t~edv~~l~~~GadgvlVGsa 244 (272)
T 3qja_A 170 HTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIA--ESGVRGTADLLAYAGAGADAVLVGEG 244 (272)
T ss_dssp SSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEE--ESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CCHHHHHHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCcccCEEEE--ECCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 355678888899999999985321 2234555555444334567776 32 1224556666666 999999864
No 96
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=51.78 E-value=52 Score=29.68 Aligned_cols=99 Identities=16% Similarity=0.077 Sum_probs=62.7
Q ss_pred HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEec-C------C----hhhhhcHHHHHhh-----cCeE
Q 016564 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-E------S----ADSIPNLHSIITA-----SDGA 343 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKI-E------t----~~gv~NL~eIl~~-----sDGI 343 (387)
+.++++.+.|.|+|=+......+++.++++.+.+.|-.+..+.-- . . .++++.+.+.++. ++.|
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 467888899999999998877888999999998766544322210 0 1 2345555555554 4567
Q ss_pred EEcCCcccc--cCC-----CCcHHHHHHHHHHHHHHCCCCcc
Q 016564 344 MVARGDLGA--ELP-----IEEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 344 mIaRGDLg~--elg-----~e~v~~~Qk~II~~c~aaGKp~g 378 (387)
.+..|.-.. ..+ ++.+...-+++...|+++|..++
T Consensus 122 ~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 163 (287)
T 3kws_A 122 IIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVI 163 (287)
T ss_dssp EECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 765542211 111 12344455788888999998764
No 97
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=51.70 E-value=21 Score=32.84 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=33.9
Q ss_pred CCHHHHHHHH-HhCCceeEeecCCC-------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 121 NTREMIWKLA-EAGMNVARLNMSHG-------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 121 ~~~e~i~~Li-~aGm~v~RiN~SHg-------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
.+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+. -+.+++|+-+
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~---Gi~vild~h~ 99 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAN---DMYAIIGWHS 99 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHT---TCEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHC---CCEEEEEcCC
Confidence 3678999998 79999999987652 3333334444333333333 3678888854
No 98
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=51.68 E-value=33 Score=32.67 Aligned_cols=65 Identities=8% Similarity=0.123 Sum_probs=47.2
Q ss_pred ccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEEcC
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImIaR 347 (387)
.+.+.++.+++.|+|+|++..+ ++++++++.+.+. .++++.|- =. --.+|+.+++++ +|+|-++.
T Consensus 204 ~t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~---~~ipi~As-GG-It~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 204 RSLEELEEALEAGADLILLDNF-PLEALREAVRRVG---GRVPLEAS-GN-MTLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SSHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT---TSSCEEEE-SS-CCHHHHHHHHHHTCSEEECTH
T ss_pred CCHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEEE-cC-CCHHHHHHHHHcCCCEEEEcH
Confidence 4577788889999999999998 6778877776653 34555441 11 126889999888 89998854
No 99
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=51.67 E-value=87 Score=30.28 Aligned_cols=97 Identities=11% Similarity=-0.026 Sum_probs=57.7
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHHH-HHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQVV-HELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~dV-~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.-|.++= +-++...+..+++++||+-+= |.++++......+. +|++|+-+-
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45567888999999873 22344443 434444555567888998874 57777766666555 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... ..-+.+ ....-..|.+.++|+.++
T Consensus 136 ~Y~~-~s~~~l---~~~f~~VA~a~~lPiilY 163 (343)
T 2v9d_A 136 YYWK-VSEANL---IRYFEQVADSVTLPVMLY 163 (343)
T ss_dssp SSSC-CCHHHH---HHHHHHHHHTCSSCEEEE
T ss_pred CCCC-CCHHHH---HHHHHHHHHhcCCCEEEE
Confidence 4321 121222 233334455667887433
No 100
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=51.58 E-value=74 Score=30.23 Aligned_cols=95 Identities=16% Similarity=0.068 Sum_probs=56.9
Q ss_pred HHHHhhHhcCCCEEEEc-------CCCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS-------FVKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS-------fV~sa~dV~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. .....|..+-++..++.. ++++||+-+ -|.++++......+. +|++|+-+-
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45568889999999874 223334444444455555 788999887 456677666665555 899999765
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCC--CCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMP--RMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaG--Kp~g~i 380 (387)
.. -..-+.+. ...-..|.+.+ .|+.++
T Consensus 112 ~~--~~s~~~l~---~~f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 112 PS--LRTDEQIT---TYFRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp TT--CCSHHHHH---HHHHHHHHHHCTTSCEEEE
T ss_pred CC--CCCHHHHH---HHHHHHHHhCCCCCcEEEE
Confidence 42 12222333 33334444555 777433
No 101
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=51.46 E-value=45 Score=29.86 Aligned_cols=55 Identities=24% Similarity=0.340 Sum_probs=41.8
Q ss_pred cEEEeccC-CcccccCcCCEEEEeCCeEEEEEEEEeCCeEEEEEEEC-------cEecCCcceeeC
Q 016564 208 ECVSVNYD-DFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVVDG-------GELKSRRHLNVR 265 (387)
Q Consensus 208 ~~i~v~~~-~l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V~~g-------G~L~s~KgVn~p 265 (387)
..+.+..+ .+.++++.||.|-+|. ++|+|.+++++.+.+.+ .- |.++.+..||+.
T Consensus 22 ~~l~i~~~~~~~~~~~~GdSIAvnG--vCLTV~~~~~~~f~vdv-~ETl~~T~Lg~l~~G~~VNLE 84 (186)
T 3ddy_A 22 QRHGIAFPEGMFQLVDVDTVMLVNG--CSNTVVRILGDMVYFDI-DQALGTTTFDGLKEGDQVNLE 84 (186)
T ss_dssp EEEEEECCTTTGGGCCTTCEEEETT--EEEEEEEEETTEEEEEE-CTTTTTSSGGGCCTTCEEEEE
T ss_pred EEEEEEeChHHhccCCCCCeEEEee--EEEEEEEEcCCEEEEEh-HHhhhhCchhhcCCCCEEEEC
Confidence 34555554 4788999999999997 99999999999988888 32 455556667763
No 102
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=50.94 E-value=17 Score=33.59 Aligned_cols=64 Identities=14% Similarity=0.073 Sum_probs=46.7
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhc---------CCCceEEEecCChhhhhcHHHHHhhcCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSC---------GADIHVIVKIESADSIPNLHSIITASDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~---------g~~i~IIAKIEt~~gv~NL~eIl~~sDGImI 345 (387)
...++.+.+.|+|+|.+..-.+ +++..+.+.+.+. |..+.+...-+|+ ++.+++++..+|.|++
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlv 154 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQL 154 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeee
Confidence 4457778899999999887665 5677777777766 5555555555676 6668888888997766
No 103
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=50.48 E-value=27 Score=33.83 Aligned_cols=53 Identities=17% Similarity=0.223 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHhCCceeEeecCCCC---------HHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 121 NTREMIWKLAEAGMNVARLNMSHGD---------HASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 121 ~~~e~i~~Li~aGm~v~RiN~SHg~---------~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
.+.+.++.|.+.|+|++||-++... ++....+-+.|..+.+ . -+.+++|+-.-
T Consensus 53 ~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~-~---Gi~vIldlH~~ 114 (353)
T 3l55_A 53 TTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMN-A---GLYAIVNVHHD 114 (353)
T ss_dssp CCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHH-H---TCEEEEECCTT
T ss_pred CCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHH-C---CCEEEEECCCC
Confidence 3689999999999999999997532 2223222223333332 3 37899999764
No 104
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=49.94 E-value=39 Score=32.13 Aligned_cols=71 Identities=15% Similarity=0.158 Sum_probs=42.5
Q ss_pred CCccc-HHHHHhhHhcCCCEEEEcCCC------------------C--------HHHHHHHHHHHHhcCCCceEEEe--c
Q 016564 274 ITEKD-WDDIKFGVDNKVDFYAVSFVK------------------D--------AQVVHELKNYLKSCGADIHVIVK--I 324 (387)
Q Consensus 274 LTe~D-~~dI~~a~~~gvD~I~lSfV~------------------s--------a~dV~~l~~~L~~~g~~i~IIAK--I 324 (387)
+++.| .+..+.+.+.|+|+|.++.-- + .+.+.++++.+ +.++.||+- |
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~---~~~ipVi~~GGI 298 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL---NGRLPIIGVGGI 298 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH---TTSSCEEEESSC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh---CCCCCEEEECCC
Confidence 45555 333467788999999997420 1 12333344333 446778874 7
Q ss_pred CChhhhhcHHHHHhh-cCeEEEcCCcc
Q 016564 325 ESADSIPNLHSIITA-SDGAMVARGDL 350 (387)
Q Consensus 325 Et~~gv~NL~eIl~~-sDGImIaRGDL 350 (387)
-|.+-+. +.++. +|+|++||+=|
T Consensus 299 ~~~~da~---~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 299 DSVIAAR---EKIAAGASLVQIYSGFI 322 (336)
T ss_dssp CSHHHHH---HHHHHTCSEEEESHHHH
T ss_pred CCHHHHH---HHHHCCCCEEEeeHHHH
Confidence 7765543 23333 99999998744
No 105
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=49.83 E-value=1.6e+02 Score=28.24 Aligned_cols=98 Identities=12% Similarity=0.014 Sum_probs=58.9
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCH-HHHHHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDA-QVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa-~dV~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.-|. |..+-++...+..+++++||+-+= |.++++......+. +||+|+.+-
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577888999999874 22344 344444444555567889998873 47777766665555 899998655
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
.... ..-+.+. ...-..|.+.++|+.+++
T Consensus 139 ~Y~~-~s~~~l~---~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 139 SYTP-LTQEEAY---HHFAAVAGATALPLAIYN 167 (332)
T ss_dssp CSSC-CCHHHHH---HHHHHHHHHCSSCEEEEC
T ss_pred CCCC-CCHHHHH---HHHHHHHHhcCCCEEEEe
Confidence 4321 1222333 333344556678874443
No 106
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=49.81 E-value=38 Score=32.42 Aligned_cols=66 Identities=9% Similarity=0.152 Sum_probs=49.2
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEec-C-ChhhhhcHHHHHhh-cCeEEEcCCc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-E-SADSIPNLHSIITA-SDGAMVARGD 349 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKI-E-t~~gv~NL~eIl~~-sDGImIaRGD 349 (387)
+++.+...+.|+|.|++.-+.+.++++++.+.+ ++++++.+ | ......+.+|+.+. .+.|++++.=
T Consensus 170 i~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~ 238 (295)
T 1xg4_A 170 IERAQAYVEAGAEMLFPEAITELAMYRQFADAV-----QVPILANITEFGATPLFTTDELRSAHVAMALYPLSA 238 (295)
T ss_dssp HHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH-----CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc-----CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHH
Confidence 455566678999999999999999999998877 35666654 4 13346778888776 7788887653
No 107
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=49.20 E-value=1.7e+02 Score=27.32 Aligned_cols=98 Identities=17% Similarity=0.082 Sum_probs=58.5
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHH-HHHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQV-VHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~d-V~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.-|.++ .+-++...+..+++++||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577888999999873 2234443 3444444555567889998873 46777766665554 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
.... ..- ..+....-..|.+.++|+.++.
T Consensus 105 ~y~~-~s~---~~l~~~f~~va~a~~lPiilYn 133 (294)
T 2ehh_A 105 YYNK-PTQ---RGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp CSSC-CCH---HHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHhcCCCEEEEe
Confidence 4321 111 2233333344566688874433
No 108
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=49.02 E-value=21 Score=32.11 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=40.5
Q ss_pred HHHHhhHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhh-cCeEEEcCCccc
Q 016564 280 DDIKFGVDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVARGDLG 351 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS-----fV~sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~-sDGImIaRGDLg 351 (387)
+..+...+.|+|+|.+. |...... ..+++..+.. ++++++ .|.+++ .+++.+++ +|+|.+++..+.
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDD---TLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHH---HHHHHHHcCCCEEEECchHhh
Confidence 34466678999999873 4444434 3344433322 456665 467755 35666666 899999887653
No 109
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=48.96 E-value=19 Score=33.93 Aligned_cols=55 Identities=20% Similarity=0.200 Sum_probs=44.4
Q ss_pred HHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeee
Q 016564 123 REMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVR 180 (387)
Q Consensus 123 ~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIR 180 (387)
.+..++|+++|.++.=||+--...+++.++...|+.+.+.. .++|++|+.-|++-
T Consensus 37 ~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~---~~pisIDT~~~~v~ 91 (271)
T 2yci_X 37 QEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV---DLPCCLDSTNPDAI 91 (271)
T ss_dssp HHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC---CCCEEEECSCHHHH
T ss_pred HHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC---CCeEEEeCCCHHHH
Confidence 35678999999999999997777788888888888876643 37899999866554
No 110
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=48.54 E-value=11 Score=35.37 Aligned_cols=52 Identities=19% Similarity=0.182 Sum_probs=33.4
Q ss_pred CHHHHHHHHHhCCceeEeecCCC-----------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 122 TREMIWKLAEAGMNVARLNMSHG-----------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SHg-----------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
+.+.++.|.+.|+|++||-++.. +.+....+-+.|..+.+ +-+.+++|+-.-
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~----~gi~vild~h~~ 95 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQ----KGAYAVVDPHNY 95 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHH----TTCEEEEEECCT
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHH----CCCEEEEecccc
Confidence 48899999999999999988632 12222222223333332 347899998764
No 111
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=48.52 E-value=65 Score=31.03 Aligned_cols=65 Identities=11% Similarity=0.034 Sum_probs=39.9
Q ss_pred HHHhhHhcCCCEEEEcCC--C-----------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh--cCeEEE
Q 016564 281 DIKFGVDNKVDFYAVSFV--K-----------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMV 345 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV--~-----------sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--sDGImI 345 (387)
.++...+.|+|+|-++-- . +.+-+..+++.+ ++.|++- ......++.+++++. +|+|++
T Consensus 244 la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~-Ggi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 244 FARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGAV-GLITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp HHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEEC-SSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-----CceEEEE-CCCCCHHHHHHHHHCCCceEEEe
Confidence 345566789999999831 0 122334444433 4566553 433345566777775 899999
Q ss_pred cCCccc
Q 016564 346 ARGDLG 351 (387)
Q Consensus 346 aRGDLg 351 (387)
||+=|+
T Consensus 318 GR~~la 323 (349)
T 3hgj_A 318 GRVLLR 323 (349)
T ss_dssp STHHHH
T ss_pred cHHHHh
Confidence 998654
No 112
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=48.44 E-value=16 Score=33.39 Aligned_cols=62 Identities=15% Similarity=0.144 Sum_probs=45.9
Q ss_pred HHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEE
Q 016564 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV 345 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImI 345 (387)
.++.+.+.|+|+|.+.. +..+++.++.+.+++.|....+...-.|+ ++.+++++...|.|++
T Consensus 79 ~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gval~p~t~--~e~l~~~l~~~D~Vl~ 140 (228)
T 3ovp_A 79 WVKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLAIKPGTS--VEYLAPWANQIDMALV 140 (228)
T ss_dssp GHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEEECTTSC--GGGTGGGGGGCSEEEE
T ss_pred HHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEEEcCCCC--HHHHHHHhccCCeEEE
Confidence 35667789999999975 55556777777777777666555544554 6778899988998876
No 113
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=48.42 E-value=93 Score=29.66 Aligned_cols=98 Identities=8% Similarity=0.039 Sum_probs=57.8
Q ss_pred HHHHhhHhcCCCEEEEcC-------CCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSF-------VKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSf-------V~sa~dV~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++.- ....|..+-++...+..+++++||+-+ -|.++++......+. +||+|+-+-
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 345678889999998532 233333344444455556788899877 466677666665555 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
.... ..- ..+....-..|.+.+.|+.++.
T Consensus 127 ~y~~-~~~---~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 127 YYNR-PNQ---RGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp CSSC-CCH---HHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHcCCCCEEEEe
Confidence 3321 111 2233344444555688874443
No 114
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=48.23 E-value=1.1e+02 Score=28.92 Aligned_cols=98 Identities=15% Similarity=0.072 Sum_probs=58.3
Q ss_pred HHHHHhhHhcCCCEEEEc------CCCCHHHHHH-HHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVS------FVKDAQVVHE-LKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lS------fV~sa~dV~~-l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaR 347 (387)
.+.+++.++.|+|+|++. +.-|.++=.+ ++...+..+++++||+-+= |.++++......+. +|++|+-+
T Consensus 35 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 35 RRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 345577888999999873 2334444444 4444455567889998874 47777766666555 89998865
Q ss_pred CcccccCCCCcHHHHHHHHHHHHHHCC-CCcccc
Q 016564 348 GDLGAELPIEEVPLLQVVFISDIRAMP-RMSSSI 380 (387)
Q Consensus 348 GDLg~elg~e~v~~~Qk~II~~c~aaG-Kp~g~i 380 (387)
-.... ..-+.+...-+.|. .+.+ .|+.++
T Consensus 115 P~y~~-~s~~~l~~~f~~va---~a~~~lPiilY 144 (303)
T 2wkj_A 115 PFYYP-FSFEEHCDHYRAII---DSADGLPMVVY 144 (303)
T ss_dssp CCSSC-CCHHHHHHHHHHHH---HHHTTCCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHH---HhCCCCCEEEE
Confidence 44321 12233443334444 4445 777433
No 115
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=48.17 E-value=67 Score=30.15 Aligned_cols=98 Identities=12% Similarity=0.035 Sum_probs=57.9
Q ss_pred HHHHHhhHh-cCCCEEEEc------CCCCHHHH-HHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEc
Q 016564 279 WDDIKFGVD-NKVDFYAVS------FVKDAQVV-HELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVA 346 (387)
Q Consensus 279 ~~dI~~a~~-~gvD~I~lS------fV~sa~dV-~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIa 346 (387)
.+.+++.++ .|+|+|++. +.-|.++= +-++...+..+++++||+-+ -|.++++......+. +|++|+-
T Consensus 27 ~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 355678889 999999873 33344443 44444455556789999887 347777766665555 8999886
Q ss_pred CCcccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 347 RGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 347 RGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
+-.... ..-+.+...-+.| |.+.+.|+.++
T Consensus 107 ~P~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 136 (293)
T 1f6k_A 107 TPFYYK-FSFPEIKHYYDTI---IAETGSNMIVY 136 (293)
T ss_dssp CCCSSC-CCHHHHHHHHHHH---HHHHCCCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 543321 1122333333333 44556777433
No 116
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=47.93 E-value=1e+02 Score=29.28 Aligned_cols=98 Identities=13% Similarity=-0.009 Sum_probs=58.6
Q ss_pred HHHHhhHhcCCCEEEEcCC------CCHHH-HHHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSFV------KDAQV-VHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV------~sa~d-V~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++.-. =+.++ .+-++...+..++++.||+-+= |.++++......+. +|++|+-+-
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4456788899999886432 23333 3334444455567888998874 56777766666555 899998655
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
.... ..- ..+....-..|.+.+.|+.++.
T Consensus 129 ~y~~-~s~---~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 129 SYWK-LNE---AEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp CSSC-CCH---HHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHhCCCcEEEEe
Confidence 4322 122 2333444444556678874443
No 117
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=47.33 E-value=1.7e+02 Score=27.30 Aligned_cols=97 Identities=10% Similarity=0.038 Sum_probs=57.5
Q ss_pred HHHHhhHhcCCCEEEEcC------CCCHHH-HHHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSF------VKDAQV-VHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSf------V~sa~d-V~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++.- .-|.++ .+-++...+..+++++||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 455678889999998732 234433 3334444455567889998874 46777766665554 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... ..-+.+ .+..-..|.+.+.|+.++
T Consensus 105 ~y~~-~s~~~l---~~~f~~ia~a~~lPiilY 132 (289)
T 2yxg_A 105 YYNK-PTQEGL---RKHFGKVAESINLPIVLY 132 (289)
T ss_dssp CSSC-CCHHHH---HHHHHHHHHHCSSCEEEE
T ss_pred CCCC-CCHHHH---HHHHHHHHHhcCCCEEEE
Confidence 4321 122223 333334455667887433
No 118
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=47.26 E-value=49 Score=31.87 Aligned_cols=69 Identities=23% Similarity=0.283 Sum_probs=48.3
Q ss_pred CCceEEEecC--CCCCC-----------HHHHHHHHHhCCceeEeecCCCC--------HHHHHHHHHHHHHHHHhcCCC
Q 016564 108 RKTKIVCTIG--PSTNT-----------REMIWKLAEAGMNVARLNMSHGD--------HASHQKVIDLVKEYNAQSKDN 166 (387)
Q Consensus 108 r~TKII~TIG--Pss~~-----------~e~i~~Li~aGm~v~RiN~SHg~--------~e~~~~~I~~iR~~~~~~~~~ 166 (387)
.+|+||+-+. |-|-+ .+..++|+++|+++.=||.--.- .+++.+++..|+.+.++.
T Consensus 8 ~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~--- 84 (314)
T 2vef_A 8 AKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES--- 84 (314)
T ss_dssp CCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC---
Confidence 5678887663 32222 35678999999999999994322 278888888888776643
Q ss_pred eeEEEEeCCCCee
Q 016564 167 VIAIMLDTKGPEV 179 (387)
Q Consensus 167 ~i~I~lDL~GPkI 179 (387)
.++|.+|+-=|++
T Consensus 85 ~vpiSIDT~~~~V 97 (314)
T 2vef_A 85 DVLISIDTWKSQV 97 (314)
T ss_dssp CCEEEEECSCHHH
T ss_pred CceEEEeCCCHHH
Confidence 3789999977654
No 119
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=46.77 E-value=75 Score=30.81 Aligned_cols=70 Identities=13% Similarity=0.055 Sum_probs=44.1
Q ss_pred cHHHHHhhHhcCCCEEEEcCCC---------------CHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhhc
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVK---------------DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITAS 340 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~---------------sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~s 340 (387)
+.++.+.+.+.|+|+|.++.-- ...-+.++.+.... .++.||+ =|-|...+ +..+..=+
T Consensus 171 t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~g~di--~kAlalGA 246 (351)
T 2c6q_A 171 TGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHG--LKGHIISDGGCSCPGDV--AKAFGAGA 246 (351)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH--TTCEEEEESCCCSHHHH--HHHHHTTC
T ss_pred CHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhh--cCCcEEEeCCCCCHHHH--HHHHHcCC
Confidence 4567888999999999887421 11223344443332 2578888 56665444 33333339
Q ss_pred CeEEEcCCccc
Q 016564 341 DGAMVARGDLG 351 (387)
Q Consensus 341 DGImIaRGDLg 351 (387)
|++++|+.=|+
T Consensus 247 ~~V~vG~~fl~ 257 (351)
T 2c6q_A 247 DFVMLGGMLAG 257 (351)
T ss_dssp SEEEESTTTTT
T ss_pred CceeccHHHhc
Confidence 99999998774
No 120
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=46.74 E-value=74 Score=30.36 Aligned_cols=99 Identities=8% Similarity=0.065 Sum_probs=58.0
Q ss_pred HHHHhhHhcCCCEEEEcC-------CCCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSF-------VKDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSf-------V~sa~dV~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++.- ....|..+-++...+..++++.||+-+ -|.++++......+. +|++|+-+-
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 455678889999988753 223334444444455557788899887 456666666665555 899998655
Q ss_pred -cccccCCCCcHHHHHHHHHHHHHHCCCCccccc
Q 016564 349 -DLGAELPIEEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 349 -DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
...--..-+.+ ....-..|.+.+.|+.++.
T Consensus 116 ~y~~kp~~~~~l---~~~f~~ia~a~~lPiilYn 146 (318)
T 3qfe_A 116 AYFGKATTPPVI---KSFFDDVSCQSPLPVVIYN 146 (318)
T ss_dssp CC---CCCHHHH---HHHHHHHHHHCSSCEEEEE
T ss_pred cccCCCCCHHHH---HHHHHHHHhhCCCCEEEEe
Confidence 32211122223 3344444556678875444
No 121
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=46.62 E-value=18 Score=36.15 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=34.3
Q ss_pred EecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHH
Q 016564 114 CTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKE 158 (387)
Q Consensus 114 ~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~ 158 (387)
+.+|+.. .+.++.++++|++++=|+.+||.++.+.++++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 3455543 789999999999999999999988777777777664
No 122
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=46.60 E-value=1.6e+02 Score=27.61 Aligned_cols=97 Identities=12% Similarity=0.035 Sum_probs=58.2
Q ss_pred HHHHhhHhcCCCEEEEcCCC------CHHHHHH-HHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSFVK------DAQVVHE-LKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~------sa~dV~~-l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++.-.. |.++=.+ ++...+..+++++||+-+ -|.++++......+. +|++|+-+-
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45567888999999874332 3333333 344445556788899887 366677666665555 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... ..- ..+....-..|.+.+.|+.++
T Consensus 112 ~y~~-~~~---~~l~~~f~~va~a~~lPiilY 139 (297)
T 3flu_A 112 YYNK-PSQ---EGIYQHFKTIAEATSIPMIIY 139 (297)
T ss_dssp CSSC-CCH---HHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHhCCCCEEEE
Confidence 3321 111 233344444555668887444
No 123
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=46.15 E-value=34 Score=34.58 Aligned_cols=99 Identities=9% Similarity=0.014 Sum_probs=57.4
Q ss_pred CCcccHHHH-HhhHhcCCCEEEEcCCCCH---------------------HHHHHHHHHHHhcCCCceEEEe--cCChhh
Q 016564 274 ITEKDWDDI-KFGVDNKVDFYAVSFVKDA---------------------QVVHELKNYLKSCGADIHVIVK--IESADS 329 (387)
Q Consensus 274 LTe~D~~dI-~~a~~~gvD~I~lSfV~sa---------------------~dV~~l~~~L~~~g~~i~IIAK--IEt~~g 329 (387)
+++.|..++ +.+.+.|+|+|.++.--.. ..++.++++-+..+.++.||+- |.|.+-
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 565554444 5567899999999874210 0123333333333457888874 777655
Q ss_pred hhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCC
Q 016564 330 IPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 330 v~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp 376 (387)
. .+-|..=+|+|+++|+=+.- |..-+..+.+.+-....+.|..
T Consensus 388 A--~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~~ 430 (443)
T 1tv5_A 388 A--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 430 (443)
T ss_dssp H--HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTCS
T ss_pred H--HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCCC
Confidence 4 23333339999999996631 2333444555555666666653
No 124
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=46.07 E-value=36 Score=31.66 Aligned_cols=64 Identities=11% Similarity=0.064 Sum_probs=47.5
Q ss_pred HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEc
Q 016564 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVA 346 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIa 346 (387)
..++.+.+.|+|+|.+..- ..+++.++.+.+++.|....|...=.|+ ++.+++++...|.|++-
T Consensus 100 ~~i~~~~~aGAd~itvH~E-a~~~~~~~i~~ir~~G~k~Gvalnp~Tp--~e~l~~~l~~vD~VlvM 163 (246)
T 3inp_A 100 ALIESFAKAGATSIVFHPE-ASEHIDRSLQLIKSFGIQAGLALNPATG--IDCLKYVESNIDRVLIM 163 (246)
T ss_dssp HHHHHHHHHTCSEEEECGG-GCSCHHHHHHHHHTTTSEEEEEECTTCC--SGGGTTTGGGCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEccc-cchhHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHhcCCEEEEe
Confidence 3567778999999999854 3457777777788777766665555664 46788999889988774
No 125
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=45.95 E-value=43 Score=32.84 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=43.5
Q ss_pred cHHHHHhhHhcCCCEEEEc-------------CCC--CHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhhc
Q 016564 278 DWDDIKFGVDNKVDFYAVS-------------FVK--DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITAS 340 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lS-------------fV~--sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~s 340 (387)
+.++.+.+.+.|+|+|.++ ... ..+-+..+.+.+. ..++.||+ -|-|.+-+.. -+..=+
T Consensus 204 ~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~--~~~ipVia~GGI~~~~d~~~--ala~GA 279 (404)
T 1eep_A 204 TKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACN--NTNICIIADGGIRFSGDVVK--AIAAGA 279 (404)
T ss_dssp SHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHT--TSSCEEEEESCCCSHHHHHH--HHHHTC
T ss_pred cHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHh--hcCceEEEECCCCCHHHHHH--HHHcCC
Confidence 4567888899999999993 221 2223344444332 23688888 6777654422 222239
Q ss_pred CeEEEcCCccc
Q 016564 341 DGAMVARGDLG 351 (387)
Q Consensus 341 DGImIaRGDLg 351 (387)
|++++||+=|+
T Consensus 280 d~V~iG~~~l~ 290 (404)
T 1eep_A 280 DSVMIGNLFAG 290 (404)
T ss_dssp SEEEECHHHHT
T ss_pred CHHhhCHHHhc
Confidence 99999987554
No 126
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=45.91 E-value=25 Score=35.46 Aligned_cols=48 Identities=25% Similarity=0.445 Sum_probs=38.9
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHH
Q 016564 112 IVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (387)
Q Consensus 112 II~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~ 159 (387)
+.+-+|+.....+.+..++++|++++=++++||......+.++.+|+.
T Consensus 228 vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 228 VGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred cccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 344566655568899999999999999999999887777888888764
No 127
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=45.76 E-value=1.5e+02 Score=27.87 Aligned_cols=97 Identities=11% Similarity=0.034 Sum_probs=58.2
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHHHHH-HHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHE-LKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~dV~~-l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.-|.++=.+ ++...+..+++++||+-+= |.++++......+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45567888999999873 2234444433 4444455567888998874 47777776666555 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... ..- ..+.+..-..|.+.+.|+.++
T Consensus 117 ~y~~-~s~---~~l~~~f~~va~a~~lPiilY 144 (301)
T 1xky_A 117 YYNK-PSQ---EGMYQHFKAIAESTPLPVMLY 144 (301)
T ss_dssp CSSC-CCH---HHHHHHHHHHHHTCSSCEEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHhcCCCEEEE
Confidence 4321 111 223333334456667887433
No 128
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=45.74 E-value=1.2e+02 Score=26.92 Aligned_cols=88 Identities=5% Similarity=-0.070 Sum_probs=54.6
Q ss_pred HHHHHhhHhcCCCEEEEcCC-----CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-----cCeEEEcCC
Q 016564 279 WDDIKFGVDNKVDFYAVSFV-----KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-----SDGAMVARG 348 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV-----~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-----sDGImIaRG 348 (387)
.+.++.+.+.|.|+|=+... -+++++.++++.+++.|-.+..+.-- ....++.+.+.++. ++.|.+-+|
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~p~ 111 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVGVPN 111 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEecCC
Confidence 34567888899999987753 36888999999998877543322111 01344444444443 456665443
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g 378 (387)
. ..-+++...|+++|..++
T Consensus 112 -------~----~~l~~l~~~a~~~gv~l~ 130 (257)
T 3lmz_A 112 -------Y----ELLPYVDKKVKEYDFHYA 130 (257)
T ss_dssp -------G----GGHHHHHHHHHHHTCEEE
T ss_pred -------H----HHHHHHHHHHHHcCCEEE
Confidence 1 233567788888887653
No 129
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=45.68 E-value=2e+02 Score=27.07 Aligned_cols=97 Identities=16% Similarity=0.107 Sum_probs=58.1
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHHH-HHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQVV-HELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~dV-~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.-|.++= +-++...+..+++++||+-+= |.++++......+. +|++|+-+-
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577888999999874 22344443 434444555567889998874 47777766665555 899988655
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... ..-+.+ ....-..|.+.+.|+.++
T Consensus 121 ~y~~-~~~~~l---~~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 121 YYSK-PSQEGL---LAHFGAIAAATEVPICLY 148 (304)
T ss_dssp CSSC-CCHHHH---HHHHHHHHHHCCSCEEEE
T ss_pred CCCC-CCHHHH---HHHHHHHHHhcCCCEEEE
Confidence 3321 111222 233334455668887433
No 130
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=45.05 E-value=94 Score=29.08 Aligned_cols=97 Identities=8% Similarity=0.062 Sum_probs=57.4
Q ss_pred HHHHhhHhcCCCEEEEcCCC------CHHHHHH-HHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSFVK------DAQVVHE-LKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~------sa~dV~~-l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|.+.-.. |.++=.+ ++...+..+++++||+-+ -|.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45567888999998764432 3333333 344445556778899887 466677666665555 899998654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... ..-+.+ ....-..|.+.+.|+.++
T Consensus 106 ~y~~-~~~~~l---~~~f~~ia~a~~lPiilY 133 (291)
T 3tak_A 106 YYNK-PTQEGL---YQHYKAIAEAVELPLILY 133 (291)
T ss_dssp CSSC-CCHHHH---HHHHHHHHHHCCSCEEEE
T ss_pred CCCC-CCHHHH---HHHHHHHHHhcCCCEEEE
Confidence 4321 122223 334444455568887433
No 131
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=44.93 E-value=87 Score=29.77 Aligned_cols=76 Identities=12% Similarity=0.099 Sum_probs=49.7
Q ss_pred HHhhHhcCCCEEEEcCC----CCHHHHHHHHHHHHh-cCCC-ceEEEecCChhhhhcHHHHHhh-cCeEEEcCCcccccC
Q 016564 282 IKFGVDNKVDFYAVSFV----KDAQVVHELKNYLKS-CGAD-IHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAEL 354 (387)
Q Consensus 282 I~~a~~~gvD~I~lSfV----~sa~dV~~l~~~L~~-~g~~-i~IIAKIEt~~gv~NL~eIl~~-sDGImIaRGDLg~el 354 (387)
++.+.+.|+|+|-+... .+.+++.++.+.... .+.. +.+..=+-..+-++++.+.+.+ ++|+.+||.=+...+
T Consensus 183 a~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~ 262 (304)
T 1to3_A 183 AKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVI 262 (304)
T ss_dssp HHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGT
T ss_pred HHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccc
Confidence 56677789999999995 456676666555433 2222 2222334233456778888776 899999999887655
Q ss_pred CCC
Q 016564 355 PIE 357 (387)
Q Consensus 355 g~e 357 (387)
+.+
T Consensus 263 ~~~ 265 (304)
T 1to3_A 263 GLP 265 (304)
T ss_dssp TCS
T ss_pred cCC
Confidence 444
No 132
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=44.88 E-value=4.3 Score=35.41 Aligned_cols=129 Identities=23% Similarity=0.281 Sum_probs=68.1
Q ss_pred eeCCCCCccccccccccccCccccccccccccCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHH
Q 016564 70 VPVSPEDVPKRDGEFQHFGGLQQLGDTSVSMWTKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASH 149 (387)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~ 149 (387)
+|++|+.-++|+++|++|.... -++.++.+..| -+||+..+.
T Consensus 4 ~~~T~~g~~~L~~El~~L~~~~------------------------------rp~i~~~i~~A--------~~~gDlsEN 45 (158)
T 1grj_A 4 IPMTLRGAEKLREELDFLKSVR------------------------------RPEIIAAIAEA--------REHGDLKEN 45 (158)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTH------------------------------HHHHHHHHHHH--------HTTCCGGGC
T ss_pred cccCHHHHHHHHHHHHHHHhcc------------------------------chhhHhhHHHH--------Hhccccccc
Confidence 4677777777888888776422 14555555555 456653222
Q ss_pred HHH---------H-HHHHHHHHhcCCCeeEEEEeCCC----CeeeecCCCCCeEe---cCCCEEEEEecCC-C--CCccE
Q 016564 150 QKV---------I-DLVKEYNAQSKDNVIAIMLDTKG----PEVRSGDLPQPITL---TSGQEFTFTIQRG-V--GSAEC 209 (387)
Q Consensus 150 ~~~---------I-~~iR~~~~~~~~~~i~I~lDL~G----PkIRtG~l~~~i~L---k~G~~v~lt~~~~-~--g~~~~ 209 (387)
.++ + ..++++.+.+. -+-.+|..- .++..|.. +.+ ..|++.++++-.. . .....
T Consensus 46 aeY~aak~~q~~~e~ri~~Le~~L~---~a~vid~~~~~~~~~V~~Gs~---V~l~~~~~~~~~~y~iVg~~ead~~~~~ 119 (158)
T 1grj_A 46 AEYHAAREQQGFCEGRIKDIEAKLS---NAQVIDVTKMPNNGRVIFGAT---VTVLNLDSDEEQTYRIVGDDEADFKQNL 119 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HEEEECGGGSCCCSBCCTTCE---EEEEETTTTEEEEEEEECTTTCBGGGTE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHh---hCeecCccccCCCCEEEeCcE---EEEEECCCCCEEEEEEECHHHhCCcCCE
Confidence 211 1 24566655543 245556432 24444432 333 2455555554311 1 12345
Q ss_pred EEeccCC--cccccCcCCEEEEe--CCeEEEEEEEEe
Q 016564 210 VSVNYDD--FVNDVEVGDMLLVD--GGMMSLLVKSKT 242 (387)
Q Consensus 210 i~v~~~~--l~~~v~~Gd~IliD--DG~I~l~V~~v~ 242 (387)
|++..|- -+-..++||.|.+. +|...++|.++.
T Consensus 120 IS~~SPlG~ALlGk~~GD~v~v~~p~G~~~~~I~~I~ 156 (158)
T 1grj_A 120 ISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVE 156 (158)
T ss_dssp EESSSHHHHHHTTCBTTCEECC------CCEEEEEEE
T ss_pred EcCCCHHHHHHcCCCCCCEEEEEcCCCcEEEEEEEEE
Confidence 7766551 33467899999886 777888888765
No 133
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=44.56 E-value=40 Score=30.51 Aligned_cols=66 Identities=9% Similarity=0.117 Sum_probs=44.0
Q ss_pred HHHhhHhcCCCEEEEcCC--CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcCCc
Q 016564 281 DIKFGVDNKVDFYAVSFV--KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGD 349 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV--~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGD 349 (387)
.++.+.+.|+|+|.+..- .+ ++..++.+.+.+.|..+.+...-.|+ .+.+.+++..+|.|.++.-.
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~ 144 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVN 144 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSC
T ss_pred HHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEec
Confidence 456778899999999966 33 45555556666666555554444665 45577788889977665433
No 134
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=44.33 E-value=56 Score=31.25 Aligned_cols=70 Identities=14% Similarity=0.232 Sum_probs=49.4
Q ss_pred CCceEEEecCCC--CCC-----------HHHHHHHHHhCCceeEeecCC--------CCHHHHHHHHHHHHHHHHhcCCC
Q 016564 108 RKTKIVCTIGPS--TNT-----------REMIWKLAEAGMNVARLNMSH--------GDHASHQKVIDLVKEYNAQSKDN 166 (387)
Q Consensus 108 r~TKII~TIGPs--s~~-----------~e~i~~Li~aGm~v~RiN~SH--------g~~e~~~~~I~~iR~~~~~~~~~ 166 (387)
.+|+||.=+.-. |.+ .+..++|+++|.++.=||.-- ...+++.+++..|+.+.++.
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~--- 114 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV--- 114 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS---
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC---
Confidence 357777766432 211 357789999999999999843 22577888888887776643
Q ss_pred eeEEEEeCCCCeee
Q 016564 167 VIAIMLDTKGPEVR 180 (387)
Q Consensus 167 ~i~I~lDL~GPkIR 180 (387)
.++|.+|+.-|++-
T Consensus 115 ~vpiSIDT~~~~V~ 128 (297)
T 1tx2_A 115 KLPISIDTYKAEVA 128 (297)
T ss_dssp CSCEEEECSCHHHH
T ss_pred CceEEEeCCCHHHH
Confidence 36789999877654
No 135
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=44.24 E-value=83 Score=31.98 Aligned_cols=98 Identities=12% Similarity=0.090 Sum_probs=59.2
Q ss_pred CcccHHHHHhhHhcCCCEEEEcCCC--CHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhcHHHHHhh-cCeEEEcCCcc
Q 016564 275 TEKDWDDIKFGVDNKVDFYAVSFVK--DAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVARGDL 350 (387)
Q Consensus 275 Te~D~~dI~~a~~~gvD~I~lSfV~--sa~dV~~l~~~L~~~g~~i~IIA-KIEt~~gv~NL~eIl~~-sDGImIaRGDL 350 (387)
.+.+.+.++..++.|+|+|.+-... +...+..++. +.+.-.++.|++ .+-|.+....+ .++ +|+|.++-|.=
T Consensus 229 ~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~-ir~~~p~~~Vi~g~v~t~e~a~~l---~~aGaD~I~Vg~g~G 304 (496)
T 4fxs_A 229 APGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARAL---IEAGVSAVKVGIGPG 304 (496)
T ss_dssp SSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCCEEEEEECSHHHHHHH---HHHTCSEEEECSSCC
T ss_pred ccchHHHHHHHHhccCceEEeccccccchHHHHHHHH-HHHHCCCceEEEcccCcHHHHHHH---HHhCCCEEEECCCCC
Confidence 3566888889999999999885543 3333333333 333334566666 47777665443 344 89999864432
Q ss_pred ccc-------CCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 351 GAE-------LPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 351 g~e-------lg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
+.. .|.. ...+-.++.++|++.++|+
T Consensus 305 s~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPV 337 (496)
T 4fxs_A 305 SICTTRIVTGVGVP-QITAIADAAGVANEYGIPV 337 (496)
T ss_dssp TTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCE
T ss_pred cCcccccccCCCcc-HHHHHHHHHHHhccCCCeE
Confidence 211 1222 2334467778888889997
No 136
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=44.21 E-value=1.5e+02 Score=27.78 Aligned_cols=98 Identities=8% Similarity=-0.021 Sum_probs=58.4
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHHH-HHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQVV-HELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~dV-~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.-|.++= +-++...+..+++++||+-+= |.++++......+. +|++|+.+-
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45567888999999863 22344443 334444455567788998874 47777766666555 899998655
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
.... ..- ..+....-..|.+.+.|+.+++
T Consensus 105 ~y~~-~s~---~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 105 YYNR-PSQ---EGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp TTTC-CCH---HHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHhcCCCEEEEe
Confidence 4321 121 2223333344556678874433
No 137
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=44.10 E-value=87 Score=29.75 Aligned_cols=58 Identities=12% Similarity=0.149 Sum_probs=40.7
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImI 345 (387)
.+.++.+.+.|+|+|.+++-...+.++.+++ . .+.|+.++.+.+-.. .+.+. +|+|.+
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a~---~~~~~GaD~i~v 136 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALAK---RMEKIGADAVIA 136 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHHH---HHHHTTCSCEEE
T ss_pred HHHHHHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHHH---HHHHcCCCEEEE
Confidence 3457788899999999998655555554443 2 578999998876443 33334 899988
No 138
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=43.53 E-value=59 Score=31.87 Aligned_cols=96 Identities=11% Similarity=0.121 Sum_probs=56.2
Q ss_pred HHHHHhhHhcCCCEEEEcCCC------CHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhhcCeEEEcCCcc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITASDGAMVARGDL 350 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~------sa~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~sDGImIaRGDL 350 (387)
.++.+.+.+.|+|+|.++.-- .+..+..+.+.....+.++.||+- |-|..-+ +..++.=+|++||||.=|
T Consensus 228 ~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv--~kaLalGA~aV~iGr~~l 305 (352)
T 3sgz_A 228 KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDV--LKALALGARCIFLGRPIL 305 (352)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHH--HHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHH--HHHHHcCCCEEEECHHHH
Confidence 467788899999999996521 122344444433333456888874 5543322 444443499999999765
Q ss_pred ccc--CCCC----cHHHHHHHHHHHHHHCCCC
Q 016564 351 GAE--LPIE----EVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 351 g~e--lg~e----~v~~~Qk~II~~c~aaGKp 376 (387)
-.. .|.+ .+..+.+++-......|..
T Consensus 306 ~~l~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 337 (352)
T 3sgz_A 306 WGLACKGEDGVKEVLDILTAELHRCMTLSGCQ 337 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 211 1222 2344456666666666754
No 139
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=43.22 E-value=57 Score=29.19 Aligned_cols=63 Identities=13% Similarity=0.038 Sum_probs=42.5
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM 344 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGIm 344 (387)
.+.++.+.+.|+|+|.++.. ..++...+.+++++.|....+.....| ..+.+..+...+|+++
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~~~~~i~~~t--~~e~~~~~~~~~d~~i 160 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIKTVFLAAPNT--PDERLKVIDDMTTGFV 160 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCEEEEEECTTC--CHHHHHHHHHHCSSEE
T ss_pred HHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCCeEEEECCCC--HHHHHHHHHhcCCCeE
Confidence 45778888999999999854 456777888888776655433333333 3455677776788543
No 140
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=43.01 E-value=55 Score=31.22 Aligned_cols=64 Identities=14% Similarity=0.133 Sum_probs=47.3
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIaR 347 (387)
.+.+..+++.|+|+|.+... +++++.++++.+.....+++|.|- | -.+|+.+++++ +|+|-+|.
T Consensus 207 lee~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~I~ASGGI----t~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 207 LQEAVQAAEAGADLVLLDNF-KPEELHPTATVLKAQFPSVAVEASGGI----TLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEESSC----CTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeeEEEECCC----CHHHHHHHHHCCCCEEEECh
Confidence 35577788999999999875 689999888888754455665543 3 24678888877 88887765
No 141
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=42.93 E-value=63 Score=31.81 Aligned_cols=69 Identities=13% Similarity=0.113 Sum_probs=45.3
Q ss_pred HHHHhhHhcCCCEEEEcCC-------CCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV-------~sa~dV~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++.-. ...|..+-++...+..++++.||+-+ -|.++++....-.++ +|++|+-+-
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 4456788899999988332 23344444445555567788999876 466666666555555 899988544
No 142
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=42.72 E-value=1.6e+02 Score=28.60 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=52.9
Q ss_pred HHHHHhhHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEE-ecCChhhhhcHHHHHhh-cCeEEEc--CCcccc
Q 016564 279 WDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIV-KIESADSIPNLHSIITA-SDGAMVA--RGDLGA 352 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~l--SfV~sa~dV~~l~~~L~~~g~~i~IIA-KIEt~~gv~NL~eIl~~-sDGImIa--RGDLg~ 352 (387)
.+.++.+++.|+|+|.+ ++-.+...+..++.+-... ++.|++ .+-|++.... +.++ +|+|.++ +|....
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~---l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKE---LIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHH---HHHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHH---HHHcCcCEEEEecCCCcCCC
Confidence 56778889999999987 4433333333343332222 567776 7777665543 3344 8999995 332111
Q ss_pred -----cCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 353 -----ELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 353 -----elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
..|... ...-.++.+.++..++|+
T Consensus 182 tr~~~g~g~p~-~~~i~~v~~~~~~~~iPV 210 (361)
T 3khj_A 182 TRIVAGVGVPQ-ITAIEKCSSVASKFGIPI 210 (361)
T ss_dssp HHHHTCBCCCH-HHHHHHHHHHHHHHTCCE
T ss_pred cccccCCCCCc-HHHHHHHHHHHhhcCCeE
Confidence 112222 233455666667778886
No 143
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=42.59 E-value=1.1e+02 Score=26.19 Aligned_cols=49 Identities=8% Similarity=0.164 Sum_probs=35.9
Q ss_pred CHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEe
Q 016564 122 TREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLD 173 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lD 173 (387)
..+.++.+.++|++.+=+.+...+.++..+.++.+++..... .+.++++
T Consensus 28 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~---~v~v~v~ 76 (215)
T 1xi3_A 28 EVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREY---DALFFVD 76 (215)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHT---TCEEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHc---CCeEEEc
Confidence 358899999999999877776677777777888887765532 2556553
No 144
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=42.39 E-value=97 Score=33.50 Aligned_cols=100 Identities=16% Similarity=0.132 Sum_probs=67.1
Q ss_pred CcccHHHHHhhHhcCCCEEEE-------------------cCCCCH--HHHHHHHHHHHhcCCCceEEEecCChhhhhcH
Q 016564 275 TEKDWDDIKFGVDNKVDFYAV-------------------SFVKDA--QVVHELKNYLKSCGADIHVIVKIESADSIPNL 333 (387)
Q Consensus 275 Te~D~~dI~~a~~~gvD~I~l-------------------SfV~sa--~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL 333 (387)
|+.-++-|.||.++|.++|.+ +|++-- -||.+|.+|-++. .+.||.-.||..++.|.
T Consensus 370 te~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 370 TANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRNY 447 (738)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhhH
Confidence 445588999999999999999 222111 2489999998875 57788889998865554
Q ss_pred ----HHHHhh-----cCeEEEcC-CcccccCCC----CcHHHHHHHHHHHHHHCCCCc
Q 016564 334 ----HSIITA-----SDGAMVAR-GDLGAELPI----EEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 334 ----~eIl~~-----sDGImIaR-GDLg~elg~----e~v~~~Qk~II~~c~aaGKp~ 377 (387)
++.++. ..||-++= ||+ .+-+- ..+-....+|++.|.+++..+
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmV 504 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMV 504 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEE
Confidence 444443 46776632 121 11111 235566789999999998765
No 145
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=42.16 E-value=52 Score=30.33 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=0.0
Q ss_pred CCcccHHHHHhhHhcCCCEEEEcCCCCHH--------HHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCe
Q 016564 274 ITEKDWDDIKFGVDNKVDFYAVSFVKDAQ--------VVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDG 342 (387)
Q Consensus 274 LTe~D~~dI~~a~~~gvD~I~lSfV~sa~--------dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDG 342 (387)
+|-++.+.+..+.+.|+|||.++-|.... .+..++.+......+++++|- | ..+|+.+++++ +||
T Consensus 140 ~S~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI----~~~ni~~~~~aGa~g 215 (243)
T 3o63_A 140 RSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI----NAQRLPAVLDAGARR 215 (243)
T ss_dssp EEECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC----CTTTHHHHHHTTCCC
T ss_pred EeCCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC----CHHHHHHHHHcCCCE
Q ss_pred EEEcCCcccccCCCCcHHHHHHHHHHHHHHCC
Q 016564 343 AMVARGDLGAELPIEEVPLLQVVFISDIRAMP 374 (387)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~Qk~II~~c~aaG 374 (387)
|.++++=+.. ++....-+++.+..++++
T Consensus 216 vav~sai~~a----~dp~~a~~~l~~~~~~~~ 243 (243)
T 3o63_A 216 IVVVRAITSA----DDPRAAAEQLRSALTAAN 243 (243)
T ss_dssp EEESHHHHTC----SSHHHHHHHHHHHHHTC-
T ss_pred EEEeHHHhCC----CCHHHHHHHHHHHHHhcC
No 146
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=42.10 E-value=1.7e+02 Score=27.22 Aligned_cols=96 Identities=11% Similarity=0.034 Sum_probs=56.5
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCH-HHHHHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDA-QVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa-~dV~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|.+. +.-|. |..+-++...+..+++++||+-+= |.++++....-.+. +|++|+.+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 45577888999999863 22344 344444444555566788988873 46777666665554 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
.... ..- ..+.+..-..|.+.+.|+.+
T Consensus 105 ~y~~-~s~---~~l~~~f~~ia~a~~lPiil 131 (292)
T 2vc6_A 105 YYNK-PTQ---EGIYQHFKAIDAASTIPIIV 131 (292)
T ss_dssp CSSC-CCH---HHHHHHHHHHHHHCSSCEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHhCCCCEEE
Confidence 3321 111 22233333445566788743
No 147
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=41.99 E-value=57 Score=31.18 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=43.8
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 109 KTKIVCTIGPSTNTR----EMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 109 ~TKII~TIGPss~~~----e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+....+++|- .++ +..+++.++|.+.+.|++.|++.+.-.+.++.+|++. + ..+.|++|..|
T Consensus 133 ~vp~~~~~g~--~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDan~ 198 (359)
T 1mdl_A 133 PVQAYDSHSL--DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV---G-DDFGIMVDYNQ 198 (359)
T ss_dssp CEEEEEECCS--CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH---C-SSSEEEEECTT
T ss_pred CeeeeeecCC--CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh---C-CCCEEEEECCC
Confidence 4555566552 233 3456677899999999999988887788888888754 2 23678888753
No 148
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=41.98 E-value=32 Score=33.27 Aligned_cols=96 Identities=8% Similarity=0.077 Sum_probs=64.6
Q ss_pred ccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHH----HHHHhcCC-CceEEEec---CChhhhhcHHHHHhhcCeEEE---
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELK----NYLKSCGA-DIHVIVKI---ESADSIPNLHSIITASDGAMV--- 345 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~----~~L~~~g~-~i~IIAKI---Et~~gv~NL~eIl~~sDGImI--- 345 (387)
.|.+.++.=+++|+||++--++=+.+....+. +.+.+.|- +++|++=| -|...+.-+. +. |+-|
T Consensus 166 ~d~~~Lk~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f~~-~~----G~~IP~~ 240 (315)
T 3ijd_A 166 DEHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFMK-WL----GISIPRW 240 (315)
T ss_dssp CHHHHHHHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHHHH-HH----TCCCCHH
T ss_pred HHHHHHHHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHHHh-cC----CCCCCHH
Confidence 57778888899999999999999999999888 44456676 78888765 4544443332 11 1111
Q ss_pred ------cCCcccccCCCCcHHHHHHHHHHHHHHCCCCcc
Q 016564 346 ------ARGDLGAELPIEEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 346 ------aRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g 378 (387)
+-.| ..+.|++-....-++++..|+-.|.|.|
T Consensus 241 l~~~l~~~~d-~~~~Gi~~a~e~~~~L~~~~~g~~~p~G 278 (315)
T 3ijd_A 241 LENDLMNCED-ILNKSVSLSKSIFNELMEFCLEKGIPIG 278 (315)
T ss_dssp HHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHhCCC-HHHHHHHHHHHHHHHHHHhcCcCCcCCC
Confidence 1123 2344554444455788889999999987
No 149
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=41.57 E-value=81 Score=29.98 Aligned_cols=97 Identities=15% Similarity=0.050 Sum_probs=53.2
Q ss_pred HHHHhhHhcCCCEEEEcCC------CCHHHH-HHHHHHHHhcCCCceEEEec--CChhhhhcHHHHHhh-cCeEEEcCCc
Q 016564 280 DDIKFGVDNKVDFYAVSFV------KDAQVV-HELKNYLKSCGADIHVIVKI--ESADSIPNLHSIITA-SDGAMVARGD 349 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV------~sa~dV-~~l~~~L~~~g~~i~IIAKI--Et~~gv~NL~eIl~~-sDGImIaRGD 349 (387)
+.+++.++.|+|+|++.-. -|.++= +-++...+..+++++||+-+ -|.++++......+. +|++|+-+-.
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPI 116 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 4556788899999886432 133333 33444455556788999887 334444433333333 7999986433
Q ss_pred ccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 350 LGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 350 Lg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.. ...-+.+...-+.| |.+.+.|+.++
T Consensus 117 y~-~~s~~~l~~~f~~v---a~a~~lPiilY 143 (316)
T 3e96_A 117 HP-YVTAGGVYAYFRDI---IEALDFPSLVY 143 (316)
T ss_dssp CS-CCCHHHHHHHHHHH---HHHHTSCEEEE
T ss_pred CC-CCCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 21 11223333333444 44446887433
No 150
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=41.38 E-value=1.4e+02 Score=27.75 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=44.2
Q ss_pred ccCcCCEEEEeCC---eEEEEEEEEeCCeEEEEEEECcEecCCc--ceeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEE
Q 016564 220 DVEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSRR--HLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294 (387)
Q Consensus 220 ~v~~Gd~IliDDG---~I~l~V~~v~~d~v~c~V~~gG~L~s~K--gVn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~ 294 (387)
-+++||.|.+-|| ....+|.+++++.+.+++..--...... .|.+ -.-+|. .++....|+.+.+.|++-|.
T Consensus 36 Rl~~Gd~i~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGV~~I~ 111 (268)
T 1vhk_A 36 RMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIKVYI---ASGLPK-GDKLEWIIQKGTELGAHAFI 111 (268)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEEECCCCCCCSSEEEE---EEECCS-TTHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCccEEE---EEeeec-CccHHHHHHHHHHhCcCEEE
Confidence 5688999987554 5667888889998888876431111111 1111 012222 23445567889999999655
Q ss_pred EcC
Q 016564 295 VSF 297 (387)
Q Consensus 295 lSf 297 (387)
.=.
T Consensus 112 p~~ 114 (268)
T 1vhk_A 112 PFQ 114 (268)
T ss_dssp EEC
T ss_pred EEE
Confidence 433
No 151
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=41.28 E-value=54 Score=30.88 Aligned_cols=90 Identities=13% Similarity=0.237 Sum_probs=52.0
Q ss_pred cHHHHHhhHhcCCCE--EEEcC---------CCCHH-----------HHHHHHHHHHhcCCCceEEEe-cCCh---hhhh
Q 016564 278 DWDDIKFGVDNKVDF--YAVSF---------VKDAQ-----------VVHELKNYLKSCGADIHVIVK-IESA---DSIP 331 (387)
Q Consensus 278 D~~dI~~a~~~gvD~--I~lSf---------V~sa~-----------dV~~l~~~L~~~g~~i~IIAK-IEt~---~gv~ 331 (387)
-.+.++...+.|+|+ +.+|| ++.+. ++-++..-+++.+.+++++.+ ..++ -|++
T Consensus 36 ~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~ 115 (271)
T 3nav_A 36 SLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGID 115 (271)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHH
Confidence 355667777889998 56777 33211 111222223333346677766 2232 3566
Q ss_pred cHHHHHhh--cCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 332 NLHSIITA--SDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 332 NL~eIl~~--sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
++-+-+.. +||+++. ++++++ .......|+++|...
T Consensus 116 ~f~~~~~~aGvdGvIip------Dlp~ee----~~~~~~~~~~~gl~~ 153 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIA------DVPTNE----SQPFVAAAEKFGIQP 153 (271)
T ss_dssp HHHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCCCCEEEEC------CCCHHH----HHHHHHHHHHcCCeE
Confidence 55554443 7999993 455554 456788889998764
No 152
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=41.17 E-value=26 Score=33.76 Aligned_cols=54 Identities=24% Similarity=0.335 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHhCCceeEeecCCC---CH-------HHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 121 NTREMIWKLAEAGMNVARLNMSHG---DH-------ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 121 ~~~e~i~~Li~aGm~v~RiN~SHg---~~-------e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
.+.+.++.|.+.|+|++||-++.. .+ +.+.+.++.+=+... .+-+.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~---~~Gi~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAY---NEGLYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHH---TTTCEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHH---HCCCEEEEECCCc
Confidence 357899999999999999988642 11 122223332222222 2347899998753
No 153
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=41.06 E-value=82 Score=29.33 Aligned_cols=91 Identities=4% Similarity=-0.024 Sum_probs=51.1
Q ss_pred HHhhHhcCCCEEEEcCCC-------------------------C----HHHHHHHHHHHHhcCCCceEEEe--cCChhhh
Q 016564 282 IKFGVDNKVDFYAVSFVK-------------------------D----AQVVHELKNYLKSCGADIHVIVK--IESADSI 330 (387)
Q Consensus 282 I~~a~~~gvD~I~lSfV~-------------------------s----a~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv 330 (387)
.+.+.+.|+|+|.++.-- . +..+..++++-+..+.++.||+- |.|.+-+
T Consensus 178 a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da 257 (311)
T 1jub_A 178 AEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDA 257 (311)
T ss_dssp HHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHH
T ss_pred HHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHH
Confidence 456677899999886421 0 11234444433333346788865 6665443
Q ss_pred hcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCC
Q 016564 331 PNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 331 ~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp 376 (387)
.. -|..=+|+|++||+=|. -+..-+..+.+.+-....+.|..
T Consensus 258 ~~--~l~~GAd~V~vg~~~l~--~~p~~~~~i~~~l~~~l~~~g~~ 299 (311)
T 1jub_A 258 FE--HLLCGATMLQIGTALHK--EGPAIFDRIIKELEEIMNQKGYQ 299 (311)
T ss_dssp HH--HHHHTCSEEEECHHHHH--HCTHHHHHHHHHHHHHHHHHTCC
T ss_pred HH--HHHcCCCEEEEchHHHh--cCcHHHHHHHHHHHHHHHHcCCC
Confidence 22 12223999999998664 12233444455666666666654
No 154
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=40.86 E-value=1.2e+02 Score=30.76 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=57.7
Q ss_pred CcccHHHHHhhHhcCCCEEEEc--CCCCHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhcHHHHHhh-cCeEEEcCCcc
Q 016564 275 TEKDWDDIKFGVDNKVDFYAVS--FVKDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVARGDL 350 (387)
Q Consensus 275 Te~D~~dI~~a~~~gvD~I~lS--fV~sa~dV~~l~~~L~~~g~~i~IIAK-IEt~~gv~NL~eIl~~-sDGImIaRGDL 350 (387)
.+.+.+.++.+++.|+|+|.+- .-.+...+..++. +.+.-.++.|++. +-|.+.... +.++ +|+|.+|-|.=
T Consensus 227 ~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~-i~~~~p~~~Vi~g~v~t~e~a~~---l~~aGaD~I~vg~g~G 302 (490)
T 4avf_A 227 GADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRW-VKQTFPDVQVIGGNIATAEAAKA---LAEAGADAVKVGIGPG 302 (490)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHH-HHHHCTTSEEEEEEECSHHHHHH---HHHTTCSEEEECSSCS
T ss_pred ccchHHHHHHHhhcccceEEecccCCcchhHHHHHHH-HHHHCCCceEEEeeeCcHHHHHH---HHHcCCCEEEECCCCC
Confidence 3456788888899999999874 3334433333333 3333345677775 777665433 3444 89999864331
Q ss_pred cc-------cCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 351 GA-------ELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 351 g~-------elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
+. ..|.. -..+-.++.++|++.++|+
T Consensus 303 s~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPV 335 (490)
T 4avf_A 303 SICTTRIVAGVGVP-QISAIANVAAALEGTGVPL 335 (490)
T ss_dssp TTCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCE
T ss_pred cCCCccccCCCCcc-HHHHHHHHHHHhccCCCcE
Confidence 11 12222 2334466777777788997
No 155
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=40.38 E-value=93 Score=29.11 Aligned_cols=70 Identities=20% Similarity=0.172 Sum_probs=46.0
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHHH-HHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQVV-HELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~dV-~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.-|.++= +-++...+..+++++||+-+ -|.++++......+. +|++|+.+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45577888999999873 23344443 44444455556778899887 347777766665555 899988654
Q ss_pred c
Q 016564 349 D 349 (387)
Q Consensus 349 D 349 (387)
.
T Consensus 106 ~ 106 (291)
T 3a5f_A 106 Y 106 (291)
T ss_dssp C
T ss_pred C
Confidence 3
No 156
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=40.17 E-value=49 Score=30.68 Aligned_cols=52 Identities=13% Similarity=0.098 Sum_probs=32.7
Q ss_pred CHHHHHHHHH-hCCceeEeecCCC------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 122 TREMIWKLAE-AGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 122 ~~e~i~~Li~-aGm~v~RiN~SHg------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+...+ +-+.+++|+-+
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~---~Gl~vild~h~ 102 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATA---RGLYVIVDWHI 102 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHT---TTCEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHH---CCCEEEEEecC
Confidence 4678999986 6999999987642 333233344433333332 34788899865
No 157
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=40.02 E-value=48 Score=31.43 Aligned_cols=54 Identities=28% Similarity=0.311 Sum_probs=38.0
Q ss_pred HHHHHHHHHhCCceeEeec-CCC-------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCeee
Q 016564 123 REMIWKLAEAGMNVARLNM-SHG-------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVR 180 (387)
Q Consensus 123 ~e~i~~Li~aGm~v~RiN~-SHg-------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkIR 180 (387)
.+..++|+++|.++.=||. |-. ..+++.+++..|+...++ .++|.+|+--|++=
T Consensus 32 ~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~----~~piSIDT~~~~va 93 (280)
T 1eye_A 32 VKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ----GITVSIDTMRADVA 93 (280)
T ss_dssp HHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT----TCCEEEECSCHHHH
T ss_pred HHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC----CCEEEEeCCCHHHH
Confidence 3567899999999999998 321 257788888888877653 36789999877653
No 158
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=39.91 E-value=64 Score=29.95 Aligned_cols=52 Identities=13% Similarity=0.166 Sum_probs=33.3
Q ss_pred CHHHHHHHHHhCCceeEeecCC---------C--CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 122 TREMIWKLAEAGMNVARLNMSH---------G--DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SH---------g--~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
+.+.|+.|.+.|+|.+||-+++ + +++....+-+.|..+.+ . -+.+++|+-+.
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~-~---Gi~vildlh~~ 105 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALK-N---DLVVIINCHHF 105 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHH-T---TCEEEEECCCC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHH-C---CCEEEEEcCCC
Confidence 5889999999999999997642 2 22223333333333333 3 37889999863
No 159
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=39.60 E-value=51 Score=31.83 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=38.4
Q ss_pred HHHHhhHhcCCCEEEEcCCCC-----H--------HHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhhcCeEE
Q 016564 280 DDIKFGVDNKVDFYAVSFVKD-----A--------QVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITASDGAM 344 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~s-----a--------~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~sDGIm 344 (387)
+.++.+.+.|+|+|.++--.. . .+...++++-+. -.++.||+- |-|.+.+. ++++-+|+||
T Consensus 148 ~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-~~~iPVianGgI~s~eda~---~~l~GaD~V~ 223 (350)
T 3b0p_A 148 QSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-FPQLTFVTNGGIRSLEEAL---FHLKRVDGVM 223 (350)
T ss_dssp HHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH-CTTSEEEEESSCCSHHHHH---HHHTTSSEEE
T ss_pred HHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-CCCCeEEEECCcCCHHHHH---HHHhCCCEEE
Confidence 345667789999999874321 0 123223322221 125777765 66655443 3343599999
Q ss_pred EcCCcc
Q 016564 345 VARGDL 350 (387)
Q Consensus 345 IaRGDL 350 (387)
|||+=|
T Consensus 224 iGRa~l 229 (350)
T 3b0p_A 224 LGRAVY 229 (350)
T ss_dssp ECHHHH
T ss_pred ECHHHH
Confidence 999743
No 160
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=39.01 E-value=77 Score=30.24 Aligned_cols=95 Identities=11% Similarity=-0.018 Sum_probs=50.9
Q ss_pred HHHHHhhHhcCCCEEEEcCC-----------CC-----------HHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHH
Q 016564 279 WDDIKFGVDNKVDFYAVSFV-----------KD-----------AQVVHELKNYLKSCGADIHVIVK--IESADSIPNLH 334 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV-----------~s-----------a~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~ 334 (387)
.++++.+.+.|+|+|.++.- +. ......+++..... .++.||+- |-|.+-+ .+
T Consensus 192 ~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~--~k 268 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDV--AK 268 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHH--HH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHH--HH
Confidence 56788889999999999731 10 01122233322222 35777763 5554433 22
Q ss_pred HHHhhcCeEEEcCCcccccC--CCC----cHHHHHHHHHHHHHHCCCC
Q 016564 335 SIITASDGAMVARGDLGAEL--PIE----EVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 335 eIl~~sDGImIaRGDLg~el--g~e----~v~~~Qk~II~~c~aaGKp 376 (387)
-|..=+|+|+|||.=|.... |.+ .+..+.+.+-..+...|..
T Consensus 269 ~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~ 316 (349)
T 1p0k_A 269 AIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGAR 316 (349)
T ss_dssp HHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22223899999996544321 322 2334445566666666654
No 161
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=38.95 E-value=73 Score=29.43 Aligned_cols=89 Identities=11% Similarity=0.028 Sum_probs=50.5
Q ss_pred HHHHhhHhcCCCEEEEcC--------CCC--------------HH----HHHHHHHHHHhcCCCceEEEe--cCChhhhh
Q 016564 280 DDIKFGVDNKVDFYAVSF--------VKD--------------AQ----VVHELKNYLKSCGADIHVIVK--IESADSIP 331 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSf--------V~s--------------a~----dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~ 331 (387)
+..+.+.+.|+|+|.++- .++ +. .+..++++ .+. -++.||+- |-|.+-
T Consensus 180 ~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i-~~~-~~ipvia~GGI~~~~d-- 255 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQV-AQD-VDIPIIGMGGVANAQD-- 255 (311)
T ss_dssp HHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHH-HTT-CSSCEEECSSCCSHHH--
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHH-HHh-cCCCEEEECCcCCHHH--
Confidence 346677889999999953 211 11 12223322 221 25677763 555443
Q ss_pred cHHHHHhh-cCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCC
Q 016564 332 NLHSIITA-SDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 332 NL~eIl~~-sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp 376 (387)
+.+.++. +|+|++||+=|. +.+-+..+.+.+-......|..
T Consensus 256 -~~~~l~~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~~ 297 (311)
T 1ep3_A 256 -VLEMYMAGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRIE 297 (311)
T ss_dssp -HHHHHHHTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTCS
T ss_pred -HHHHHHcCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCCC
Confidence 3333433 999999998766 4444555555555555666654
No 162
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=38.92 E-value=1.3e+02 Score=28.80 Aligned_cols=60 Identities=13% Similarity=0.221 Sum_probs=40.1
Q ss_pred HHHHHhhHhcCCCEEEEcCCCC-HHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEE-cC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKD-AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV-AR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~s-a~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImI-aR 347 (387)
.+.++.+.+.|+|+|.+++-.. .+.++.+++ . ++.++.++-|.+-. ....+. +|+|.+ ++
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~----~--g~~v~~~v~t~~~a---~~a~~~GaD~i~v~g~ 174 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR----A--GTLTLVTATTPEEA---RAVEAAGADAVIAQGV 174 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH----T--TCEEEEEESSHHHH---HHHHHTTCSEEEEECT
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH----C--CCeEEEECCCHHHH---HHHHHcCCCEEEEeCC
Confidence 4567788899999999988653 455555543 2 46788888775533 222223 899998 54
No 163
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=38.58 E-value=71 Score=28.89 Aligned_cols=100 Identities=11% Similarity=0.011 Sum_probs=59.0
Q ss_pred HHHHHhhHhcCCCEEEEcCCC----------CHHHHHHHHHHHHhcCCCceEEEe-------cCC------hhhhhcHHH
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK----------DAQVVHELKNYLKSCGADIHVIVK-------IES------ADSIPNLHS 335 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~----------sa~dV~~l~~~L~~~g~~i~IIAK-------IEt------~~gv~NL~e 335 (387)
.+.++.+.+.|.|+|-+.+-. +.+++.++++.+++.|-.+..+.- +-+ .++++.+..
T Consensus 33 ~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~ 112 (295)
T 3cqj_A 33 LERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRK 112 (295)
T ss_dssp HHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHH
Confidence 345778888999999997654 467788999999887765433321 111 123455555
Q ss_pred HHhh-----cCeEEEcCCcccccCCC----CcHHHHHHHHHHHHHHCCCCcc
Q 016564 336 IITA-----SDGAMVARGDLGAELPI----EEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 336 Il~~-----sDGImIaRGDLg~elg~----e~v~~~Qk~II~~c~aaGKp~g 378 (387)
.++. ++.|.+..++-..+... +.+...-+++...|+++|..++
T Consensus 113 ~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 164 (295)
T 3cqj_A 113 AIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLA 164 (295)
T ss_dssp HHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 5554 45666654432111111 2234444677777888887653
No 164
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=38.29 E-value=1.4e+02 Score=26.72 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=61.6
Q ss_pred HHHhhHhcCCCEEEEcCCC----CHHHHHHHHHHHHhcCCCceEEEe------cC----------------ChhhhhcHH
Q 016564 281 DIKFGVDNKVDFYAVSFVK----DAQVVHELKNYLKSCGADIHVIVK------IE----------------SADSIPNLH 334 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~----sa~dV~~l~~~L~~~g~~i~IIAK------IE----------------t~~gv~NL~ 334 (387)
.++.+.+.|.|+|=+..-. +.+++.++++.+++.|-.+..+.- .- ...+++.+.
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 105 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMK 105 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHH
Confidence 5778889999999888653 477899999999887765544421 00 123555666
Q ss_pred HHHhh-----cCeEEEcCCccccc--CCCCcHHHHHHHHHHHHHHCCCCcc
Q 016564 335 SIITA-----SDGAMVARGDLGAE--LPIEEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 335 eIl~~-----sDGImIaRGDLg~e--lg~e~v~~~Qk~II~~c~aaGKp~g 378 (387)
+.++. ++.|.+..|...-. -.++.+...-+++...|+++|..++
T Consensus 106 ~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 156 (290)
T 3tva_A 106 EISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVH 156 (290)
T ss_dssp HHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 66554 56777755533211 1112344455778888888887653
No 165
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=38.24 E-value=1e+02 Score=29.13 Aligned_cols=97 Identities=11% Similarity=0.049 Sum_probs=56.4
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHHHHH-HHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHE-LKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~dV~~-l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.-|.++=.+ ++...+..+++++||+-+= |.++++......+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44567788999999873 2334444434 4444455567888998873 46777666665554 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... ..- ..+....-..|.+.+.|+.++
T Consensus 117 ~y~~-~s~---~~l~~~f~~va~a~~lPiilY 144 (306)
T 1o5k_A 117 YYNK-PTQ---EGLYQHYKYISERTDLGIVVY 144 (306)
T ss_dssp CSSC-CCH---HHHHHHHHHHHTTCSSCEEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHhCCCCEEEE
Confidence 3321 111 222233333455567776433
No 166
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.10 E-value=1e+02 Score=29.11 Aligned_cols=98 Identities=9% Similarity=-0.021 Sum_probs=58.8
Q ss_pred HHHHhhHhcCCCEEEEcC------CCCHHH-HHHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVSF------VKDAQV-VHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSf------V~sa~d-V~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++.- .=|.++ .+-++...+..++++.||+-+ -|.++++......+. +|++|+-+-
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 445678889999987532 123333 333444445556778888765 577788777776665 899988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSIK 381 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id 381 (387)
.... .. -..+....-..|.+.+.|+.++.
T Consensus 109 ~y~~-~~---~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 109 AYFP-LK---DAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp CSSC-CC---HHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCC-CC---HHHHHHHHHHHHHHCCCCEEEEE
Confidence 4322 12 22333444455566678875443
No 167
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=38.02 E-value=50 Score=35.11 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=65.9
Q ss_pred CcccHHHHHhhHhcCCCEEEEcCC----------C--CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh---
Q 016564 275 TEKDWDDIKFGVDNKVDFYAVSFV----------K--DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--- 339 (387)
Q Consensus 275 Te~D~~dI~~a~~~gvD~I~lSfV----------~--sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--- 339 (387)
++.-+.-|.||.++|.++|.+--- + ...|+.+|.+|.++.| +.|+.=.|+..=-+++++.++.
T Consensus 308 ~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kg--V~i~lw~~~~~~~~~~~~~~~~~~~ 385 (641)
T 3a24_A 308 NPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKN--VGIILWAGYHAFERDMENVCRHYAE 385 (641)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTT--CEEEEEEEHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcC--CEEEEEeeCcchHHHHHHHHHHHHH
Confidence 444588899999999999997221 0 1247999999998765 5566666665434556766664
Q ss_pred --cCeEEEc---CCcccccCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 340 --SDGAMVA---RGDLGAELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 340 --sDGImIa---RGDLg~elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
.+||-++ |+| ..+.....+|++.|.+++..+
T Consensus 386 ~Gv~gvK~Df~~~~~-------Q~~v~~y~~i~~~aA~~~l~V 421 (641)
T 3a24_A 386 MGVKGFKVDFMDRDD-------QEMTAFNYRAAEMCAKYKLIL 421 (641)
T ss_dssp HTCCEEEEECCCCCS-------HHHHHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEECCCCCCc-------HHHHHHHHHHHHHHHHcCCEE
Confidence 6788663 333 455566789999999999775
No 168
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=38.01 E-value=97 Score=29.75 Aligned_cols=102 Identities=9% Similarity=-0.041 Sum_probs=61.7
Q ss_pred CCCcccHHH-HH-hhHhcCCCEEEE-cCCCCHHHHHHHHHHHHh-----cCCCceEEEecCChhhhhcHHHHHhh-cC--
Q 016564 273 SITEKDWDD-IK-FGVDNKVDFYAV-SFVKDAQVVHELKNYLKS-----CGADIHVIVKIESADSIPNLHSIITA-SD-- 341 (387)
Q Consensus 273 ~LTe~D~~d-I~-~a~~~gvD~I~l-SfV~sa~dV~~l~~~L~~-----~g~~i~IIAKIEt~~gv~NL~eIl~~-sD-- 341 (387)
.++..|+.. ++ ...+.|+|.|=+ +|+.++++.+.++++.+. .-.+..+.+-+=+.. .++..+++ .|
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v 113 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVL 113 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEE
Confidence 356666544 45 555689999988 667678666666554432 223456767666655 44444444 55
Q ss_pred eEEEcCCcccc----cCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 342 GAMVARGDLGA----ELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 342 GImIaRGDLg~----elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
.++++-.|+-. ....++.......+++.|+++|+.+
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v 153 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKI 153 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEE
Confidence 44555555421 1233455566678899999999876
No 169
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=37.93 E-value=61 Score=28.40 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=0.0
Q ss_pred CCcccHHHHHhhHhcCCCEEEEcCCCC---------HHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeE
Q 016564 274 ITEKDWDDIKFGVDNKVDFYAVSFVKD---------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGA 343 (387)
Q Consensus 274 LTe~D~~dI~~a~~~gvD~I~lSfV~s---------a~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGI 343 (387)
++..+.+++..+.+.|+|+|.++-+.. +.+...++++....+ ++++++ +=-.. .+|+.+++++ +||+
T Consensus 121 ~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia-~GGI~-~~nv~~~~~~Ga~gv 197 (227)
T 2tps_A 121 VSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVG-IGGIT-IDNAAPVIQAGADGV 197 (227)
T ss_dssp EEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEE-ESSCC-TTTSHHHHHTTCSEE
T ss_pred EecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEE-EcCCC-HHHHHHHHHcCCCEE
Q ss_pred EEcCCcccccCCCCcHHHHHHHHHHHHHHC
Q 016564 344 MVARGDLGAELPIEEVPLLQVVFISDIRAM 373 (387)
Q Consensus 344 mIaRGDLg~elg~e~v~~~Qk~II~~c~aa 373 (387)
.++++=+.. ++....-+++++..+++
T Consensus 198 ~vgs~i~~~----~d~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 198 SMISAISQA----EDPESAARKFREEIQTY 223 (227)
T ss_dssp EESHHHHTS----SCHHHHHHHHHHHHHHH
T ss_pred EEhHHhhcC----CCHHHHHHHHHHHHHhc
No 170
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=37.86 E-value=66 Score=31.32 Aligned_cols=63 Identities=10% Similarity=0.098 Sum_probs=40.4
Q ss_pred HHhhHhcCCCEEEEcCC-------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh--cCeEEEcCCccc
Q 016564 282 IKFGVDNKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLG 351 (387)
Q Consensus 282 I~~a~~~gvD~I~lSfV-------~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--sDGImIaRGDLg 351 (387)
++.+.+.|+|+|.++-- ...+-+..+++.+ ++.||+- ... ..++.+++++. +|+|++||+=|+
T Consensus 257 a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~-----~iPvi~~-Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 257 IEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF-----HGVIIGA-GAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-----CSEEEEE-SSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC-----CCCEEEE-CCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 45566789999999741 1223344444432 4566653 333 36777888876 899999998765
No 171
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=37.78 E-value=1.5e+02 Score=26.80 Aligned_cols=81 Identities=5% Similarity=-0.010 Sum_probs=49.9
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEEcCCcccccCCCC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImIaRGDLg~elg~e 357 (387)
.+.++.+++.|++.|-+.+ ++....+.++++..+. .++.+-+- |.---+.++.-+++ +|+++.+-.|
T Consensus 32 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~l~vgaG--tvl~~d~~~~A~~aGAd~v~~p~~d-------- 99 (224)
T 1vhc_A 32 LPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR-PDFLIAAG--TVLTAEQVVLAKSSGADFVVTPGLN-------- 99 (224)
T ss_dssp HHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEEE--SCCSHHHHHHHHHHTCSEEECSSCC--------
T ss_pred HHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC-cCcEEeeC--cEeeHHHHHHHHHCCCCEEEECCCC--------
Confidence 4556778899999999996 4555555555544443 34444443 22222445554444 8999766443
Q ss_pred cHHHHHHHHHHHHHHCCCCc
Q 016564 358 EVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 358 ~v~~~Qk~II~~c~aaGKp~ 377 (387)
..+++.|+++|++.
T Consensus 100 ------~~v~~~ar~~g~~~ 113 (224)
T 1vhc_A 100 ------PKIVKLCQDLNFPI 113 (224)
T ss_dssp ------HHHHHHHHHTTCCE
T ss_pred ------HHHHHHHHHhCCCE
Confidence 44667888888876
No 172
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=37.77 E-value=53 Score=30.70 Aligned_cols=22 Identities=36% Similarity=0.421 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHhCCceeEeecC
Q 016564 121 NTREMIWKLAEAGMNVARLNMS 142 (387)
Q Consensus 121 ~~~e~i~~Li~aGm~v~RiN~S 142 (387)
.+.+.++.|.+.|+|++||-++
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~ 50 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFD 50 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCC
Confidence 3578999999999999999875
No 173
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=37.56 E-value=1.7e+02 Score=27.71 Aligned_cols=58 Identities=21% Similarity=0.213 Sum_probs=40.5
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImI 345 (387)
.+.++.+++.|+|+|.+.+-...+.++.+++ . .++++.++-+.+-... ..+. +|+|.+
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~----~--g~~v~~~v~s~~~a~~---a~~~GaD~i~v 150 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRELKE----N--GTKVIPVVASDSLARM---VERAGADAVIA 150 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHHHHH----T--TCEEEEEESSHHHHHH---HHHTTCSCEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHHHHH----c--CCcEEEEcCCHHHHHH---HHHcCCCEEEE
Confidence 5567788899999999998766555444433 2 5788888877654433 3333 899998
No 174
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=37.56 E-value=61 Score=30.89 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=55.3
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHH-HHHHHHHHHHhcCCCceEEEecC--ChhhhhcHHHHHhh-cCeEEEcCCc
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQ-VVHELKNYLKSCGADIHVIVKIE--SADSIPNLHSIITA-SDGAMVARGD 349 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~-dV~~l~~~L~~~g~~i~IIAKIE--t~~gv~NL~eIl~~-sDGImIaRGD 349 (387)
+.+++.++.|+|+|.+. +.-|.+ ..+-++...+..+++++||+-+= |.++++......+. +|++|+-+-.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 45567888999998864 223443 33444444555567889998875 45555555544443 8999986544
Q ss_pred ccccCCCCcHHHHHHHHHHHHHHCCCCccc
Q 016564 350 LGAELPIEEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 350 Lg~elg~e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
... ..-+. +....-..|.+.+.|+.+
T Consensus 117 y~~-~s~~~---l~~~f~~va~a~~lPiil 142 (314)
T 3d0c_A 117 HPY-ITDAG---AVEYYRNIIEALDAPSII 142 (314)
T ss_dssp CSC-CCHHH---HHHHHHHHHHHSSSCEEE
T ss_pred CCC-CCHHH---HHHHHHHHHHhCCCCEEE
Confidence 321 11122 333333445666788743
No 175
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=37.53 E-value=60 Score=31.92 Aligned_cols=67 Identities=12% Similarity=0.149 Sum_probs=42.1
Q ss_pred cccHHHHHhhHhcCCCEEEE--cCCCCHHHHHHHHHHHHhcCCCceEEEe-cCChhhhhcHHHHHhh-cCeEEEc
Q 016564 276 EKDWDDIKFGVDNKVDFYAV--SFVKDAQVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVA 346 (387)
Q Consensus 276 e~D~~dI~~a~~~gvD~I~l--SfV~sa~dV~~l~~~L~~~g~~i~IIAK-IEt~~gv~NL~eIl~~-sDGImIa 346 (387)
+.+.+.++.+++.|+|+|.+ +.-.+ +.+.+.-+.+++...++.|+++ +-|++.... ..++ +|+|.++
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~-~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~---a~~aGaD~I~Vg 169 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHA-KYVGKTLKSLRQLLGSRCIMAGNVATYAGADY---LASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSS-HHHHHHHHHHHHHHTTCEEEEEEECSHHHHHH---HHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc-HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHH---HHHcCCCEEEEc
Confidence 45677788999999999988 33333 2222222333333246889995 877765433 3344 8999985
No 176
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=37.30 E-value=59 Score=29.06 Aligned_cols=67 Identities=15% Similarity=0.138 Sum_probs=40.8
Q ss_pred HHHHhhHhcCCCEEEEcCC-----CCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhh-cCeEEEcCCccc
Q 016564 280 DDIKFGVDNKVDFYAVSFV-----KDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVARGDLG 351 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV-----~sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~-sDGImIaRGDLg 351 (387)
+..+...+.|+|+|.+.-. ........++++.+. .++++++ .|.++ +.+++.+++ +|+|++++..|.
T Consensus 34 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~--~~ipvi~~ggI~~~---~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 34 ELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ--IDIPFTVGGGIHDF---ETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT--CCSCEEEESSCCSH---HHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh--CCCCEEEeCCCCCH---HHHHHHHHcCCCEEEEChHHHh
Confidence 3445667789999877532 233344444443322 3456665 46665 346666665 899999987664
No 177
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=37.22 E-value=2.1e+02 Score=25.07 Aligned_cols=87 Identities=10% Similarity=-0.029 Sum_probs=55.7
Q ss_pred HHHHHhhHhcCCCEEEEcCC---------------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh----
Q 016564 279 WDDIKFGVDNKVDFYAVSFV---------------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA---- 339 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV---------------~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~---- 339 (387)
.+.++.+.+.|.|+|=+... -+.+++.++++.+++.|-.+..+.-- ....++.+...++.
T Consensus 25 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~l 103 (262)
T 3p6l_A 25 TEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY-VAEKSSDWEKMFKFAKAM 103 (262)
T ss_dssp HHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE-CCSSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc-CCccHHHHHHHHHHHHHc
Confidence 34577888999999988643 35788999999999877654333221 11234444444443
Q ss_pred -cCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 340 -SDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 340 -sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
++.|.+.+|. +. -+++...|+++|..+
T Consensus 104 Ga~~v~~~~~~-------~~----~~~l~~~a~~~gv~l 131 (262)
T 3p6l_A 104 DLEFITCEPAL-------SD----WDLVEKLSKQYNIKI 131 (262)
T ss_dssp TCSEEEECCCG-------GG----HHHHHHHHHHHTCEE
T ss_pred CCCEEEecCCH-------HH----HHHHHHHHHHhCCEE
Confidence 4577776542 22 267788888888765
No 178
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=37.20 E-value=1.1e+02 Score=29.71 Aligned_cols=96 Identities=16% Similarity=0.007 Sum_probs=57.6
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCCc
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQVVHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARGD 349 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~dV~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRGD 349 (387)
+.+++.++.|+|+|++. +.-+.++-.++-+. ..++++.||+-+= |.++++......+. +|++|+-+-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 45567888999999873 44455555555554 3456788998873 46777766665555 8999986554
Q ss_pred ccccCCCCcHHHHHHHHHHHHH-HCCCCcccc
Q 016564 350 LGAELPIEEVPLLQVVFISDIR-AMPRMSSSI 380 (387)
Q Consensus 350 Lg~elg~e~v~~~Qk~II~~c~-aaGKp~g~i 380 (387)
...-..-+.+. ...-..|. +.+.|+.++
T Consensus 129 y~~~~s~~~l~---~~f~~IA~aa~~lPiilY 157 (344)
T 2hmc_A 129 LSRGSVIAAQK---AHFKAILSAAPEIPAVIY 157 (344)
T ss_dssp SSSTTCHHHHH---HHHHHHHHHSTTSCEEEE
T ss_pred cCCCCCHHHHH---HHHHHHHhhCCCCcEEEE
Confidence 32211112222 33333445 567887433
No 179
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=36.48 E-value=86 Score=28.10 Aligned_cols=68 Identities=9% Similarity=0.134 Sum_probs=41.8
Q ss_pred cHHHHHhhHhcCCCEEEEcCC-CCHHHH--HHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh--cCeEEEc
Q 016564 278 DWDDIKFGVDNKVDFYAVSFV-KDAQVV--HELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVA 346 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV-~sa~dV--~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--sDGImIa 346 (387)
+.+|++.+.+.|+|++.+-|. .|+..| .+++++.......+..+.=.-+. ..+.+.+|+.. .|.|-+-
T Consensus 11 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 11 NLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNE-EPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp SHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHHTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 567899999999999999874 455544 44454444433344433333222 24556666654 5788774
No 180
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=36.39 E-value=1.2e+02 Score=27.13 Aligned_cols=97 Identities=7% Similarity=-0.061 Sum_probs=59.1
Q ss_pred HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEE-ec---C------------ChhhhhcHHHHHhh----
Q 016564 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIV-KI---E------------SADSIPNLHSIITA---- 339 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIA-KI---E------------t~~gv~NL~eIl~~---- 339 (387)
+.++.+.+.|.|+|=+.+-. ..++.++++.+++.|-.+..+. -. . ..++++.+.+.++.
T Consensus 27 ~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~l 105 (269)
T 3ngf_A 27 ERFRLAAEAGFGGVEFLFPY-DFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALAL 105 (269)
T ss_dssp HHHHHHHHTTCSEEECSCCT-TSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEecCCc-cCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHc
Confidence 45778889999999887643 4578888999988765543322 11 0 12345556655554
Q ss_pred -cCeEEEcCCcccccCC----CCcHHHHHHHHHHHHHHCCCCcc
Q 016564 340 -SDGAMVARGDLGAELP----IEEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 340 -sDGImIaRGDLg~elg----~e~v~~~Qk~II~~c~aaGKp~g 378 (387)
++.|.+..| ...... ++.+...-+++...|+++|..++
T Consensus 106 Ga~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 148 (269)
T 3ngf_A 106 DCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVL 148 (269)
T ss_dssp TCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred CCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 456777666 222222 12344445677888888887764
No 181
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=36.12 E-value=1.3e+02 Score=33.20 Aligned_cols=61 Identities=16% Similarity=0.362 Sum_probs=38.6
Q ss_pred HHhhHhcCCCEEEEcCC---------------CCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-----cC
Q 016564 282 IKFGVDNKVDFYAVSFV---------------KDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-----SD 341 (387)
Q Consensus 282 I~~a~~~gvD~I~lSfV---------------~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-----sD 341 (387)
++.+.+.|+|+|.+.+- ++++.+.++-+.+.+. .++.|++|+ ++ .+.++.+++.. +|
T Consensus 654 a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~~~~~G~d 730 (1025)
T 1gte_A 654 SRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARAAKEGGAD 730 (1025)
T ss_dssp HHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHHHHHHTCS
T ss_pred HHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHHHHHcCCC
Confidence 34455689999999542 3455555555555432 257899998 22 44456666554 79
Q ss_pred eEEE
Q 016564 342 GAMV 345 (387)
Q Consensus 342 GImI 345 (387)
+|.+
T Consensus 731 ~i~v 734 (1025)
T 1gte_A 731 GVTA 734 (1025)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9988
No 182
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=36.08 E-value=62 Score=31.18 Aligned_cols=64 Identities=8% Similarity=0.067 Sum_probs=44.3
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 109 KTKIVCTIGPSTNTR----EMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 109 ~TKII~TIGPss~~~----e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+....+|.|....++ +..+++.++|.+.+.|++.|++.+.-.+.++.+|++. + ..+.|++|..|
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G-~d~~l~vDan~ 200 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---G-DSFPLMVDANM 200 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---C-TTSCEEEECTT
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---C-CCCeEEEECCC
Confidence 344556655322244 3456777899999999999988888888888888764 2 23567888753
No 183
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=36.02 E-value=1.2e+02 Score=24.15 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=38.0
Q ss_pred CCCeeeecCCC--CCeEec-CCCEEEEEecCCCCCccEEEeccCCcc-cccCcCCEEEE
Q 016564 175 KGPEVRSGDLP--QPITLT-SGQEFTFTIQRGVGSAECVSVNYDDFV-NDVEVGDMLLV 229 (387)
Q Consensus 175 ~GPkIRtG~l~--~~i~Lk-~G~~v~lt~~~~~g~~~~i~v~~~~l~-~~v~~Gd~Ili 229 (387)
.|..+|+|.+- +.+.-. .|..++|...+.......++|.|..++ +.++.|.-|..
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECSSCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcCCCCCcEEEEEECCCCCccccCCCeEEE
Confidence 57789998763 344433 477889987654334577999997644 67788888866
No 184
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=35.88 E-value=42 Score=31.29 Aligned_cols=69 Identities=10% Similarity=0.101 Sum_probs=41.6
Q ss_pred ccHHHHHhhHhc-CCCEEEEcCCC---CHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhhcCeEEEcCC
Q 016564 277 KDWDDIKFGVDN-KVDFYAVSFVK---DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITASDGAMVARG 348 (387)
Q Consensus 277 ~D~~dI~~a~~~-gvD~I~lSfV~---sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~sDGImIaRG 348 (387)
++.++++.+++. |+|+|.+..-+ ..-|+....+++.....+..+|+ -|-|++-+ ....+.+||++||.+
T Consensus 158 ~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv---~~~~~~a~avLVG~a 232 (251)
T 1i4n_A 158 HSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGIKDPREL---KDLRGKVNAVLVGTS 232 (251)
T ss_dssp CSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGH---HHHTTTCSEEEECHH
T ss_pred CCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHH---HHHHHhCCEEEEcHH
Confidence 457778999999 99999987622 12234444555554445566665 23333333 333334899999854
No 185
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=35.69 E-value=33 Score=32.96 Aligned_cols=47 Identities=17% Similarity=0.321 Sum_probs=36.1
Q ss_pred EEecCCCCCCHHHHHHHHHhC--CceeEeecCCCCHHHHHHHHHHHHHH
Q 016564 113 VCTIGPSTNTREMIWKLAEAG--MNVARLNMSHGDHASHQKVIDLVKEY 159 (387)
Q Consensus 113 I~TIGPss~~~e~i~~Li~aG--m~v~RiN~SHg~~e~~~~~I~~iR~~ 159 (387)
.+-+|......+..+.++++| .+.+-+|++||++..+.+.|+.+|+.
T Consensus 98 ~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 98 SISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH 146 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 333555444567788999999 99999999999888777888888763
No 186
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=35.64 E-value=90 Score=27.94 Aligned_cols=68 Identities=4% Similarity=-0.018 Sum_probs=40.6
Q ss_pred cHHHHHhhHhcCCCEEEEcCC-CCHHHH--HHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh--cCeEEEc
Q 016564 278 DWDDIKFGVDNKVDFYAVSFV-KDAQVV--HELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVA 346 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV-~sa~dV--~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--sDGImIa 346 (387)
+.+|+..+.+.|+|++.+-|. .|+..| ..++++.......+..+.=.-+. ..+.+.+|+.. .|.|-+-
T Consensus 10 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 10 RLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQ-PPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp CHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 567899999999999998874 455544 44444444433334333333222 24555666654 5777763
No 187
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=35.36 E-value=33 Score=33.85 Aligned_cols=45 Identities=16% Similarity=0.267 Sum_probs=35.9
Q ss_pred ecCCCCCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHH
Q 016564 115 TIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEY 159 (387)
Q Consensus 115 TIGPss~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~ 159 (387)
.+|-.....+.++.++++|++++=++.+||..+...++|+.+|+.
T Consensus 94 ~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 94 SVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 344333457899999999999999999999887777788888764
No 188
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=35.07 E-value=45 Score=31.95 Aligned_cols=52 Identities=17% Similarity=0.191 Sum_probs=33.2
Q ss_pred CHHHHHHHH-HhCCceeEeecCCC------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 122 TREMIWKLA-EAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 122 ~~e~i~~Li-~aGm~v~RiN~SHg------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
+.+.+..|. +.|+|++||-+..+ +++....+-+.|..+ .+. -+.+++|+-+.
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l~~ld~~v~~a-~~~---Gi~VIld~H~~ 113 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIGENGYATNPEVKDLVYEGIELA-FEH---DMYVIVDWHVH 113 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHHHHHHHHHHHH-HHT---TCEEEEEEECC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHHHHHHHHHHHH-HHC---CCEEEEEeccC
Confidence 578899997 89999999987742 233333332333333 333 37788898763
No 189
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=34.94 E-value=1.1e+02 Score=26.93 Aligned_cols=74 Identities=19% Similarity=0.110 Sum_probs=43.7
Q ss_pred CcccHHHHHhhHhcCCCEEEEcCCC---CH------HHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEE
Q 016564 275 TEKDWDDIKFGVDNKVDFYAVSFVK---DA------QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAM 344 (387)
Q Consensus 275 Te~D~~dI~~a~~~gvD~I~lSfV~---sa------~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGIm 344 (387)
+-.+.+++..+. .|+|||.++-+- +. -+...++.+......+++++|- =-. ..+|+.+.+++ ++||-
T Consensus 94 s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviai-GGI-~~~nv~~~~~~Ga~gVa 170 (210)
T 3ceu_A 94 SCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMAL-GGI-NEDNLLEIKDFGFGGAV 170 (210)
T ss_dssp EECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEE-SSC-CTTTHHHHHHTTCSEEE
T ss_pred ecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEE-CCC-CHHHHHHHHHhCCCEEE
Confidence 334556677777 899999976441 11 1344455544321135666662 111 14688888887 89998
Q ss_pred EcCCccc
Q 016564 345 VARGDLG 351 (387)
Q Consensus 345 IaRGDLg 351 (387)
++++=..
T Consensus 171 v~s~i~~ 177 (210)
T 3ceu_A 171 VLGDLWN 177 (210)
T ss_dssp ESHHHHT
T ss_pred EhHHhHc
Confidence 8776443
No 190
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=34.93 E-value=82 Score=30.17 Aligned_cols=49 Identities=10% Similarity=0.124 Sum_probs=37.8
Q ss_pred HHHHHHHH-hCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 124 EMIWKLAE-AGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 124 e~i~~Li~-aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+..+++++ +|.+.+.|++.|++.+.-.+.++.+|++.- ..+.+++|..|
T Consensus 148 ~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g----~~~~l~vDan~ 197 (370)
T 1nu5_A 148 DSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVG----DRASVRVDVNQ 197 (370)
T ss_dssp HHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHG----GGCEEEEECTT
T ss_pred HHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhcC----CCCEEEEECCC
Confidence 34566777 999999999999888877888888887642 23678888753
No 191
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=34.89 E-value=2.5e+02 Score=26.45 Aligned_cols=98 Identities=9% Similarity=-0.028 Sum_probs=60.6
Q ss_pred HHHHHhhHhcCCCEEEEcCC-------CCHHHHHHHHHHHHhcCCCceEEEec---CChhhhhcHHHHHhh-c-CeEEEc
Q 016564 279 WDDIKFGVDNKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIVKI---ESADSIPNLHSIITA-S-DGAMVA 346 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV-------~sa~dV~~l~~~L~~~g~~i~IIAKI---Et~~gv~NL~eIl~~-s-DGImIa 346 (387)
.+.+++.++.|+|+|++.-. ...|..+-++...+..+++++||+-+ -|.++++......+. + |++|+.
T Consensus 31 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~ 110 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAI 110 (311)
T ss_dssp HHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEc
Confidence 35677888999999887543 23334444444555557788999887 467777777776665 4 999986
Q ss_pred CCcccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 347 RGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 347 RGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
+-.... .. -..+....-..|.+.+.|+.+.
T Consensus 111 ~P~y~~-~s---~~~l~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 111 VPYYNK-PS---QEGMYQHFKAIADASDLPIIIY 140 (311)
T ss_dssp CCCSSC-CC---HHHHHHHHHHHHHSCSSCEEEE
T ss_pred CCCCCC-CC---HHHHHHHHHHHHHhCCCCEEEE
Confidence 544322 11 1233344445555668887443
No 192
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=34.81 E-value=90 Score=27.02 Aligned_cols=64 Identities=14% Similarity=0.071 Sum_probs=41.1
Q ss_pred HHHHHhhHhcCCCEEEEcCC--------CCHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVSFV--------KDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV--------~sa~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIaR 347 (387)
.+.++.+.+.|+|+|.+.-- ...+.++++++.+ .++.+++- | + .+|+.+++++ +|++++|+
T Consensus 117 ~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~----~~~~i~~~gGI-~---~~~~~~~~~~Gad~vvvGs 188 (211)
T 3f4w_A 117 PARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVR----RKARIAVAGGI-S---SQTVKDYALLGPDVVIVGS 188 (211)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHC----SSCEEEEESSC-C---TTTHHHHHTTCCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHc----CCCcEEEECCC-C---HHHHHHHHHcCCCEEEECH
Confidence 35578888999999877411 2344555555433 24455432 4 2 4688888887 99999998
Q ss_pred Ccc
Q 016564 348 GDL 350 (387)
Q Consensus 348 GDL 350 (387)
+=+
T Consensus 189 ai~ 191 (211)
T 3f4w_A 189 AIT 191 (211)
T ss_dssp HHH
T ss_pred HHc
Confidence 543
No 193
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=34.73 E-value=65 Score=29.62 Aligned_cols=51 Identities=14% Similarity=0.237 Sum_probs=32.6
Q ss_pred CHHHHHHHHHhCCceeEeecCCC---------C--HHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 122 TREMIWKLAEAGMNVARLNMSHG---------D--HASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SHg---------~--~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+.+.++.|.+.|+|.+|+-++.. . ++....+-+.|..+.+ . -+.+++|+-+
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~-~---Gi~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALK-R---GLAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHH-T---TCEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHH-C---CCEEEEEecC
Confidence 57789999999999999986631 1 2223333333443333 3 3788899975
No 194
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=34.58 E-value=1.1e+02 Score=29.67 Aligned_cols=49 Identities=10% Similarity=0.211 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 124 EMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 124 e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+..+++.++|-+.+.+...|++.+.-.+.++.+|++. + ..+.|++|..|
T Consensus 145 ~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G-~d~~l~vDan~ 193 (382)
T 2gdq_A 145 SNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---G-SSITMILDANQ 193 (382)
T ss_dssp HHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---C-TTSEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---C-CCCEEEEECCC
Confidence 3456677889999999999988888888888888754 2 23678888753
No 195
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=34.49 E-value=89 Score=28.92 Aligned_cols=91 Identities=8% Similarity=-0.032 Sum_probs=56.6
Q ss_pred CcccH-HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhh----------hcHHHHHhh-cCe
Q 016564 275 TEKDW-DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSI----------PNLHSIITA-SDG 342 (387)
Q Consensus 275 Te~D~-~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv----------~NL~eIl~~-sDG 342 (387)
|..|. +.++.+.+.|++.|+++ +.-+..+. ..+..++.++.+.-++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 55563 44567888999999998 33343333 3346777887766655 446666655 676
Q ss_pred EEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 343 AMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 343 ImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
|-+ |-.++ +-...++...-+++...|+.+|.|+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~v 141 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPL 141 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeE
Confidence 644 33333 1122334444578899999999997
No 196
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=34.40 E-value=41 Score=31.62 Aligned_cols=21 Identities=33% Similarity=0.466 Sum_probs=18.8
Q ss_pred HHHHHHHHHhCCceeEeecCC
Q 016564 123 REMIWKLAEAGMNVARLNMSH 143 (387)
Q Consensus 123 ~e~i~~Li~aGm~v~RiN~SH 143 (387)
.+.++.|.+.|+|++||-++.
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~ 67 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSD 67 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEG
T ss_pred HHHHHHHHHcCCCEEEeeccH
Confidence 678999999999999999873
No 197
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=34.04 E-value=88 Score=29.29 Aligned_cols=97 Identities=11% Similarity=-0.016 Sum_probs=55.0
Q ss_pred HHHHhhHhcCCCEEEEc------CCCCHHH-HHHHHHHHHhcCCCceEEEecC---ChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAVS------FVKDAQV-VHELKNYLKSCGADIHVIVKIE---SADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS------fV~sa~d-V~~l~~~L~~~g~~i~IIAKIE---t~~gv~NL~eIl~~-sDGImIaRG 348 (387)
+.+++.++.|+|+|++. +.-|.++ .+-++...+..+++++||+-+= |.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577888999999873 2234444 3444444555567888998874 46666555554443 799988654
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSSI 380 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~i 380 (387)
.... ..- ..+....-..|.+.+.|+.++
T Consensus 106 ~y~~-~s~---~~l~~~f~~ia~a~~lPiilY 133 (292)
T 2ojp_A 106 YYNR-PSQ---EGLYQHFKAIAEHTDLPQILY 133 (292)
T ss_dssp CSSC-CCH---HHHHHHHHHHHTTCSSCEEEE
T ss_pred CCCC-CCH---HHHHHHHHHHHHhcCCCEEEE
Confidence 4321 111 222233333455567776433
No 198
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=34.00 E-value=1.2e+02 Score=28.03 Aligned_cols=75 Identities=17% Similarity=0.220 Sum_probs=46.4
Q ss_pred ccCcCCEEEEeCC---eEEEEEEEEeCCeEEEEEEECcEecCCcc--eeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEE
Q 016564 220 DVEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSRRH--LNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294 (387)
Q Consensus 220 ~v~~Gd~IliDDG---~I~l~V~~v~~d~v~c~V~~gG~L~s~Kg--Vn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~ 294 (387)
-+++||.|.+-|| ....+|.+++++.+.+++...-....... +.+ -..+|. .++-...|+.+.+.|++-|.
T Consensus 33 R~~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGv~~I~ 108 (251)
T 4e8b_A 33 RMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIHL---GQVMSR-GEKMEFTIQKSIELGVSLIT 108 (251)
T ss_dssp CCCSCCEEEEECSSSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSEEEE---EEECCS-SSHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCEEEEEeCCCcEEEEEEEEeecceEEEEEeeeecCCCCCCceEEE---EEEeec-hhHHHHHHHHHHhhCCCEEE
Confidence 4678999988664 35778888999999888865322221111 111 011222 33445667889999999876
Q ss_pred EcCC
Q 016564 295 VSFV 298 (387)
Q Consensus 295 lSfV 298 (387)
.=+.
T Consensus 109 p~~t 112 (251)
T 4e8b_A 109 PLFS 112 (251)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 4443
No 199
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=33.80 E-value=96 Score=29.84 Aligned_cols=49 Identities=20% Similarity=0.142 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCceeEeecCCC------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 124 EMIWKLAEAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 124 e~i~~Li~aGm~v~RiN~SHg------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+..+++.++|.+.+.|++.|+ +.+.-.+.++.+|++. + ..+.|++|..|
T Consensus 155 ~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~---g-~d~~l~vDan~ 209 (382)
T 1rvk_A 155 RFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---G-PDIRLMIDAFH 209 (382)
T ss_dssp HHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---C-TTSEEEEECCT
T ss_pred HHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh---C-CCCeEEEECCC
Confidence 445677889999999999997 7777778888888754 2 23678888854
No 200
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=33.78 E-value=1.2e+02 Score=27.79 Aligned_cols=95 Identities=13% Similarity=0.037 Sum_probs=0.0
Q ss_pred HHHHHhhHhcCCCEEEEcCCCC----------------------HHHHHHHHHHHHhcCCCceEEEec-CCh---hhhhc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKD----------------------AQVVHELKNYLKSCGADIHVIVKI-ESA---DSIPN 332 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~s----------------------a~dV~~l~~~L~~~g~~i~IIAKI-Et~---~gv~N 332 (387)
.+.++...+.|+|+|-+-+--+ .+..-++.+.+++.+.+++++.+. .++ -|+++
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~ 113 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDA 113 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHH
Q ss_pred HHHHHhh--cCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccc
Q 016564 333 LHSIITA--SDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAF 383 (387)
Q Consensus 333 L~eIl~~--sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~ 383 (387)
+-+-+.. +||+++. |+.. .-..+.+..|+++|...+.+-++
T Consensus 114 ~~~~~~~aGadgii~~--d~~~--------e~~~~~~~~~~~~g~~~i~l~~p 156 (268)
T 1qop_A 114 FYARCEQVGVDSVLVA--DVPV--------EESAPFRQAALRHNIAPIFICPP 156 (268)
T ss_dssp HHHHHHHHTCCEEEET--TCCG--------GGCHHHHHHHHHTTCEEECEECT
T ss_pred HHHHHHHcCCCEEEEc--CCCH--------HHHHHHHHHHHHcCCcEEEEECC
No 201
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=33.72 E-value=1.6e+02 Score=25.38 Aligned_cols=67 Identities=6% Similarity=-0.027 Sum_probs=44.2
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEcCCccc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARGDLG 351 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIaRGDLg 351 (387)
..++..+.+.|+|+|-+-- .....+..++++.... .+++|++- | | .+|+.+++++ +|++.+|+.=+.
T Consensus 114 ~~e~~~a~~~Gad~vk~~~-~~~~g~~~~~~l~~~~-~~~pvia~GGI-~---~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 114 PTELVKAMKLGHTILKLFP-GEVVGPQFVKAMKGPF-PNVKFVPTGGV-N---LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp HHHHHHHHHTTCCEEEETT-HHHHHHHHHHHHHTTC-TTCEEEEBSSC-C---TTTHHHHHHHTCSCEEECHHHHC
T ss_pred HHHHHHHHHcCCCEEEEcC-ccccCHHHHHHHHHhC-CCCcEEEcCCC-C---HHHHHHHHHCCCCEEEECccccC
Confidence 3457788999999887532 2334455555554322 25677664 6 2 3689999888 999999976444
No 202
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=33.34 E-value=52 Score=29.29 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=40.0
Q ss_pred HHHHhhHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhh-cCeEEEcCCccc
Q 016564 280 DDIKFGVDNKVDFYAVS-----FVKDAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMVARGDLG 351 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS-----fV~sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~-sDGImIaRGDLg 351 (387)
+..+...+.|+|+|.+. |...... ..+++..+.. ++++++ .|.+++ .+++.+++ +|+|++++..|.
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDE---SLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc--CCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHhh
Confidence 34456677899999884 5544433 3333333322 455665 466655 35666666 899999887653
No 203
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=33.30 E-value=91 Score=27.26 Aligned_cols=65 Identities=15% Similarity=0.190 Sum_probs=41.7
Q ss_pred HHHHHhhHhcCCCEEEEcCC------C----CHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhh-cCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFV------K----DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA-SDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV------~----sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~-sDGImI 345 (387)
.++...+.+.|+|+|.++.. . ...++..++++.+.. ++.|++ -|-| .+|+.+++++ +|++++
T Consensus 129 ~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GGI~~---~~~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 129 VEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGNVIT---PDMYKRVMDLGVHCSVV 203 (223)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecCCCC---HHHHHHHHHcCCCEEEE
Confidence 44566678899999987532 1 345566666665543 466665 2443 3455556655 899999
Q ss_pred cCC
Q 016564 346 ARG 348 (387)
Q Consensus 346 aRG 348 (387)
|++
T Consensus 204 G~a 206 (223)
T 1y0e_A 204 GGA 206 (223)
T ss_dssp CHH
T ss_pred ChH
Confidence 986
No 204
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=33.06 E-value=38 Score=31.21 Aligned_cols=52 Identities=25% Similarity=0.348 Sum_probs=31.9
Q ss_pred CHHHHHHHHHhCCceeEeecCCC---CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 122 TREMIWKLAEAGMNVARLNMSHG---DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SHg---~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
+.+.++.|.+.|+|++|+-++.+ ..+.. +.++.+=++..+ +-+.+++|+-+.
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~-~~ld~~v~~a~~---~Gi~Vild~H~~ 87 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDI-DTIREVIELAEQ---NKMVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCH-HHHHHHHHHHHT---TTCEEEEEECTT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHH-HHHHHHHHHHHH---CCCEEEEEeccC
Confidence 45789999999999999987633 11122 222222222232 337888998764
No 205
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=32.98 E-value=97 Score=31.72 Aligned_cols=96 Identities=17% Similarity=0.170 Sum_probs=56.8
Q ss_pred HHHHHhhHhcCCCEEEEcCCC---------CHHHHHHHHHHHHhc--CCCceEEEe--cCChhhhhcHHHHHhhcCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK---------DAQVVHELKNYLKSC--GADIHVIVK--IESADSIPNLHSIITASDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~---------sa~dV~~l~~~L~~~--g~~i~IIAK--IEt~~gv~NL~eIl~~sDGImI 345 (387)
.++.+.+.+.|+|+|.+|.-. ..+-+.++++.+.+. +.++.||+- |-|..-+ +..|+.=+|+|||
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv--~kaLalGAdaV~i 431 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDV--LKALCLGAKGVGL 431 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHH--HHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHH--HHHHHcCCCEEEE
Confidence 567888999999999996421 123444555555432 246888874 4443322 3333333999999
Q ss_pred cCCcccccC--C---CC-cHHHHHHHHHHHHHHCCCC
Q 016564 346 ARGDLGAEL--P---IE-EVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 346 aRGDLg~el--g---~e-~v~~~Qk~II~~c~aaGKp 376 (387)
||.=|-... | ++ .+..+.+++-......|..
T Consensus 432 Gr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 468 (511)
T 1kbi_A 432 GRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVT 468 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 996553221 1 11 2344556666666666754
No 206
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=32.69 E-value=30 Score=29.53 Aligned_cols=57 Identities=23% Similarity=0.379 Sum_probs=39.7
Q ss_pred EecCCCEEEEEecC--CCCC---ccEEEeccCCccc---ccCcCCEEEEeCCeEEEEEEEEeCCeEE
Q 016564 189 TLTSGQEFTFTIQR--GVGS---AECVSVNYDDFVN---DVEVGDMLLVDGGMMSLLVKSKTEDSVK 247 (387)
Q Consensus 189 ~Lk~G~~v~lt~~~--~~g~---~~~i~v~~~~l~~---~v~~Gd~IliDDG~I~l~V~~v~~d~v~ 247 (387)
-++.|++.+|++.. .+|. .....++-..|.. .+++|+.+.+.+ +..+|.+++++.|.
T Consensus 64 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~v~~~~v~ 128 (151)
T 1ix5_A 64 DMEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITEVTDNEVT 128 (151)
T ss_dssp TCCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEEEETTEEE
T ss_pred CCCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEEEcCCEEE
Confidence 36789988888764 3332 2334455455543 588999999887 67788999988775
No 207
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=32.49 E-value=99 Score=30.75 Aligned_cols=52 Identities=27% Similarity=0.299 Sum_probs=33.2
Q ss_pred CCCHHHH-HHHHHhCCceeEeecCCC---------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 016564 120 TNTREMI-WKLAEAGMNVARLNMSHG---------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (387)
Q Consensus 120 s~~~e~i-~~Li~aGm~v~RiN~SHg---------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~ 175 (387)
....+.| +.|.+.|+|++||-++.. +.+....+-+.|+.+.+ +-+.+++|+-
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a~~----~Gi~vildlH 126 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAE----RGYKVMLDMH 126 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHH----TTCEEEEEEC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHHHH----CCCEEEEEcc
Confidence 3467888 899999999999987632 12333333334444433 2378888853
No 208
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=32.30 E-value=2.6e+02 Score=24.47 Aligned_cols=99 Identities=8% Similarity=0.013 Sum_probs=59.1
Q ss_pred HHHHHhhHhcCCCEEEEcCCC------CHHHHHHHHHHHHhcCCCceEEEe---cCC--hhhhhcHHHHHhh-----cCe
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK------DAQVVHELKNYLKSCGADIHVIVK---IES--ADSIPNLHSIITA-----SDG 342 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~------sa~dV~~l~~~L~~~g~~i~IIAK---IEt--~~gv~NL~eIl~~-----sDG 342 (387)
.+.++.+.+.|.|+|=+..-. +..++.++++.+.+.|-.+.-+.- +.. .+..+.+...++. ++.
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 101 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARA 101 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCE
Confidence 345788889999999887421 346788889999877655422221 211 2233444444443 456
Q ss_pred EEEcCCcccccCCCCcH-HHHHHHHHHHHHHCCCCcc
Q 016564 343 AMVARGDLGAELPIEEV-PLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 343 ImIaRGDLg~elg~e~v-~~~Qk~II~~c~aaGKp~g 378 (387)
|.+..|.-+. -.++.+ ...-+++...|+++|..++
T Consensus 102 v~~~~g~~~~-~~~~~~~~~~l~~l~~~a~~~gv~l~ 137 (272)
T 2q02_A 102 LVLCPLNDGT-IVPPEVTVEAIKRLSDLFARYDIQGL 137 (272)
T ss_dssp EEECCCCSSB-CCCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred EEEccCCCch-hHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 6665554321 223344 5556788888888887654
No 209
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=32.29 E-value=82 Score=31.94 Aligned_cols=68 Identities=22% Similarity=0.300 Sum_probs=0.0
Q ss_pred cHHHHHhhHhcCCCEEEEcC-----CCCH--------------HHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHH
Q 016564 278 DWDDIKFGVDNKVDFYAVSF-----VKDA--------------QVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSI 336 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSf-----V~sa--------------~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eI 336 (387)
+.++.+.+.+.|+|+|.+.+ +.+. +-...+++++++.|.++.||| -|-|...+ +..+
T Consensus 294 t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di--~kAl 371 (503)
T 1me8_A 294 DGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHM--TLAL 371 (503)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHH--HHHH
T ss_pred CHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHH--HHHH
Q ss_pred HhhcCeEEEcC
Q 016564 337 ITASDGAMVAR 347 (387)
Q Consensus 337 l~~sDGImIaR 347 (387)
+.=+|++|+|+
T Consensus 372 alGA~~V~iG~ 382 (503)
T 1me8_A 372 AMGADFIMLGR 382 (503)
T ss_dssp HTTCSEEEESH
T ss_pred HcCCCEEEECc
No 210
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=31.36 E-value=70 Score=30.18 Aligned_cols=64 Identities=8% Similarity=0.149 Sum_probs=39.9
Q ss_pred ccHHHHHhhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh----cCeEEEc
Q 016564 277 KDWDDIKFGVDNKVDFYAVS------FVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVA 346 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lS------fV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~----sDGImIa 346 (387)
+|.+.++.+++.|++.|.+. |--+ +....++......+..+|+ |+ |+.+-+++... +||++||
T Consensus 161 h~~~El~rAl~~~a~iIGINNRnL~tf~vd---l~~t~~L~~~ip~~~~~Vs--ES--GI~t~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 161 NDENDLDIALRIGARFIGIMSRDFETGEIN---KENQRKLISMIPSNVVKVA--KL--GISERNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp SSHHHHHHHHHTTCSEEEECSBCTTTCCBC---HHHHHHHHTTSCTTSEEEE--EE--SSCCHHHHHHHHHTTCCEEEEC
T ss_pred chHHHHHHHhcCCCcEEEEeCCCccccccC---HHHHHHHHhhCCCCCEEEE--cC--CCCCHHHHHHHHHCCCCEEEEC
Confidence 56788899999999999885 3333 3333344433344555554 22 55555555443 7999997
Q ss_pred C
Q 016564 347 R 347 (387)
Q Consensus 347 R 347 (387)
-
T Consensus 234 e 234 (258)
T 4a29_A 234 S 234 (258)
T ss_dssp H
T ss_pred H
Confidence 3
No 211
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=31.29 E-value=55 Score=31.33 Aligned_cols=60 Identities=18% Similarity=0.238 Sum_probs=47.0
Q ss_pred ccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHH
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSI 336 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eI 336 (387)
.|.+.++.=+++|+||++--++=+++.+..+.+.+.+.|-+++|++=|==.....++.-+
T Consensus 164 ~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 223 (304)
T 3fst_A 164 ADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKL 223 (304)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHH
Confidence 467777777899999999999999999999999998888888888765433444444444
No 212
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=31.14 E-value=63 Score=30.87 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=49.1
Q ss_pred ccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHh
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT 338 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~ 338 (387)
.|.+.++.=+++|+||++--++=+++.+..+.+.+.+.|-+++|++=|==.....++.-+.+
T Consensus 161 ~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~ 222 (310)
T 3apt_A 161 ADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTE 222 (310)
T ss_dssp HHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHHH
Confidence 46777777789999999999999999999999999888878888877654444555554433
No 213
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=31.11 E-value=1.4e+02 Score=28.45 Aligned_cols=62 Identities=11% Similarity=0.179 Sum_probs=44.8
Q ss_pred ccHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChh--hhhcHHHHHhh-cCeEEEc
Q 016564 277 KDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESAD--SIPNLHSIITA-SDGAMVA 346 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~--gv~NL~eIl~~-sDGImIa 346 (387)
.+.+.++.+++.|+|+|.+-.. ++++++++.+.+. .++. ||--- -.+|+.++++. +|+|-+|
T Consensus 206 ~tl~ea~eAl~aGaD~I~LDn~-~~~~l~~av~~~~---~~v~----ieaSGGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 206 TNLDELNQAIAAKADIVMLDNF-SGEDIDIAVSIAR---GKVA----LEVSGNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp SSHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TTCE----EEEESSCCTTTHHHHHTTTCSEEECS
T ss_pred CCHHHHHHHHHcCCCEEEEcCC-CHHHHHHHHHhhc---CCce----EEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 3456778889999999999886 6788888877764 3433 33222 35688888888 8988875
No 214
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=30.80 E-value=19 Score=34.82 Aligned_cols=53 Identities=23% Similarity=0.187 Sum_probs=33.2
Q ss_pred CHHHHHHHHHhCCceeEeecCCC-----------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCe
Q 016564 122 TREMIWKLAEAGMNVARLNMSHG-----------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPE 178 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SHg-----------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPk 178 (387)
+.+++..|.+.|+|++||-++.. +.+....+-+.|..+.+ +-+.+++|+-.-.
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~----~Gi~vIlDlH~~~ 108 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLS----LGAYCIVDIHNYA 108 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHH----TTCEEEEEECSTT
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHH----CCCEEEEEecCCc
Confidence 56788888899999999998752 12222222222333322 3478999997643
No 215
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=30.45 E-value=1.9e+02 Score=25.71 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=60.7
Q ss_pred HHHHhhHhcCCCEEEEcCC-------CCHHHHHHHHHHHHhcCCCceEEEe-cC------ChhhhhcHHHHHhh-----c
Q 016564 280 DDIKFGVDNKVDFYAVSFV-------KDAQVVHELKNYLKSCGADIHVIVK-IE------SADSIPNLHSIITA-----S 340 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV-------~sa~dV~~l~~~L~~~g~~i~IIAK-IE------t~~gv~NL~eIl~~-----s 340 (387)
+.++.+.+.|.|+|=+... .+.+++.++++.+.+.|-.+..++- .. ..+.++.+...++. +
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 98 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKT 98 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCC
Confidence 4678888999999988432 1347788888888877765444321 10 12345555555554 5
Q ss_pred CeEEEcCCcccccCCC----CcHHHHHHHHHHHHHHCCCCcc
Q 016564 341 DGAMVARGDLGAELPI----EEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 341 DGImIaRGDLg~elg~----e~v~~~Qk~II~~c~aaGKp~g 378 (387)
+.|.+-.|...-.... +.+...-+++...|+++|..++
T Consensus 99 ~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 140 (286)
T 3dx5_A 99 NKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVL 140 (286)
T ss_dssp CEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 6777766654322211 2334445778888888887653
No 216
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=30.04 E-value=69 Score=29.44 Aligned_cols=46 Identities=22% Similarity=0.366 Sum_probs=29.7
Q ss_pred HHHHHHHHhCCceeEeecCCC------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 124 EMIWKLAEAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 124 e~i~~Li~aGm~v~RiN~SHg------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+.++.|.+.|+|++|+-++.+ ..+...++++. +.+ . -+.+++|+-+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~---a~~-~---Gi~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISL---CKQ-N---RLICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHH---HHH-T---TCEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHH---HHH-C---CCEEEEEecc
Confidence 688889999999999988643 12223333332 222 3 3778899864
No 217
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=30.01 E-value=74 Score=27.41 Aligned_cols=58 Identities=16% Similarity=0.245 Sum_probs=39.4
Q ss_pred EecCCCEEEEEecC--CCC---CccEEEeccCCccc---ccCcCCEEEEeCCeEEEEEEEEeCCeEEE
Q 016564 189 TLTSGQEFTFTIQR--GVG---SAECVSVNYDDFVN---DVEVGDMLLVDGGMMSLLVKSKTEDSVKC 248 (387)
Q Consensus 189 ~Lk~G~~v~lt~~~--~~g---~~~~i~v~~~~l~~---~v~~Gd~IliDDG~I~l~V~~v~~d~v~c 248 (387)
-++.|++.+|++.. .+| ......++-..|.. .+++|+.+.+++ . ..+|++++++.|..
T Consensus 63 gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~-~-~~~V~~v~~~~V~v 128 (157)
T 3pr9_A 63 EMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (157)
T ss_dssp HCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecC-C-CeEEEEEcCCEEEE
Confidence 46789999998754 343 33455666556654 256799999964 3 46888888886643
No 218
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=29.97 E-value=1.2e+02 Score=28.21 Aligned_cols=71 Identities=17% Similarity=0.138 Sum_probs=42.8
Q ss_pred ccCcCCEEEEeCC---eEEEEEEEEeCCeEEEEEEECcEecCCcceeeCCCCCCC-CCCC---cccHHHHHhhHhcCCCE
Q 016564 220 DVEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATL-PSIT---EKDWDDIKFGVDNKVDF 292 (387)
Q Consensus 220 ~v~~Gd~IliDDG---~I~l~V~~v~~d~v~c~V~~gG~L~s~KgVn~p~~~l~l-p~LT---e~D~~dI~~a~~~gvD~ 292 (387)
-+++||.|.+-|| ....++.+++++.+.+++..--..... |...+.+ -.++ ++-...|+.+.+.|++-
T Consensus 32 Rl~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e-----~~~~i~L~~al~K~~dr~d~iiqKatELGV~~ 106 (257)
T 3kw2_A 32 RMQAGDRLRLTDGRGSFFDAVIETADRKSCYVSVCGQESWQKP-----WRDRITIAIAPTKQSERMEWMLEKLVEIGVDE 106 (257)
T ss_dssp CCCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCS-----SCSCEEEEECCCSSHHHHHHHHHHHHHHCCSE
T ss_pred cCCCCCEEEEEECCCCEEEEEEEEeeCCEEEEEEEEecccCCC-----CCCceEEEEecCCCcchHHHHHHHHHhhCCCE
Confidence 4678999988665 356777888888888887653221111 1111111 1233 33345578899999997
Q ss_pred EEE
Q 016564 293 YAV 295 (387)
Q Consensus 293 I~l 295 (387)
|..
T Consensus 107 I~p 109 (257)
T 3kw2_A 107 VVF 109 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 219
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=29.82 E-value=95 Score=30.11 Aligned_cols=48 Identities=17% Similarity=0.248 Sum_probs=37.8
Q ss_pred HHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 125 MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 125 ~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
..+++.++|-+.+.|+..|++.+.-.+.++.+|++.- ..+.|++|..|
T Consensus 172 ~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g----~~~~l~vDan~ 219 (392)
T 1tzz_A 172 EMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIG----KDAQLAVDANG 219 (392)
T ss_dssp HHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHT----TTCEEEEECTT
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcC----CCCeEEEECCC
Confidence 4467778999999999999888888888888887532 23678888854
No 220
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=29.67 E-value=56 Score=29.15 Aligned_cols=19 Identities=37% Similarity=0.347 Sum_probs=15.6
Q ss_pred HHHHHHHHHhCCceeEeec
Q 016564 123 REMIWKLAEAGMNVARLNM 141 (387)
Q Consensus 123 ~e~i~~Li~aGm~v~RiN~ 141 (387)
.+.|+.|.+.|+|++|+-+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~ 63 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWI 63 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHcCCcEEEECc
Confidence 3568889999999999843
No 221
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=29.37 E-value=1.3e+02 Score=27.93 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=42.9
Q ss_pred ccCcCCEEEEeCC---eEEEEEEEEeCCeEEEEEEECcEecCCc--ceeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEE
Q 016564 220 DVEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSRR--HLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294 (387)
Q Consensus 220 ~v~~Gd~IliDDG---~I~l~V~~v~~d~v~c~V~~gG~L~s~K--gVn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~ 294 (387)
-+++||.|.+-|| ....+|.+++++.+.+++..--...... .|.+ ..-+|. .++-...|+.+.+.|++-|.
T Consensus 35 Rl~~Gd~v~l~dg~g~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~l~L---~~al~K-~~r~e~ilqkatELGv~~I~ 110 (257)
T 1vhy_A 35 RMTEGEQLELFDGSNHIYPAKIIESNKKSVKVEILGRELADKESHLKIHL---GQVISR-GERMEFTIQKSVELGVNVIT 110 (257)
T ss_dssp CCCTTCEEEEECSSSEEEEEEEEEECSSCEEEEECCCEECCCCCSSCEEE---EEEC-----CCHHHHHHHHHTTCCEEE
T ss_pred ccCCCCEEEEEcCCCCEEEEEEEEeeCCeEEEEEEEEecccCCCCceEEE---EEecCc-hHHHHHHHHHHHhhCcCEEE
Confidence 5688999988665 3567788888888888776432211111 1111 012222 34556688999999999654
Q ss_pred E
Q 016564 295 V 295 (387)
Q Consensus 295 l 295 (387)
.
T Consensus 111 p 111 (257)
T 1vhy_A 111 P 111 (257)
T ss_dssp E
T ss_pred E
Confidence 4
No 222
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=29.27 E-value=69 Score=30.56 Aligned_cols=66 Identities=6% Similarity=0.218 Sum_probs=45.6
Q ss_pred HHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEe----cCChhhhhcHHHHHhh-cCeEEEcCCccccc
Q 016564 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVK----IESADSIPNLHSIITA-SDGAMVARGDLGAE 353 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAK----IEt~~gv~NL~eIl~~-sDGImIaRGDLg~e 353 (387)
..+.+.+.|+|||-.||.. +.++++.+ . ..++|++. ..+.+.++++.+.+++ ++|+.+||.=+-.+
T Consensus 194 aariA~elGAD~VKt~~t~--e~~~~vv~---~--~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~ 264 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYYVE--KGFERIVA---G--CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSD 264 (295)
T ss_dssp HHHHHHHTTCSEEEEECCT--TTHHHHHH---T--CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSS
T ss_pred HHHHHHHhCCCEEEeCCCH--HHHHHHHH---h--CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCc
Confidence 4567889999999999972 44444332 2 23555532 2446777888787777 89999999876665
No 223
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=29.25 E-value=1.2e+02 Score=27.48 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCcccccc
Q 016564 304 VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKA 382 (387)
Q Consensus 304 V~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~ 382 (387)
++.+++.+.+.+.++.+.+--+... -+|+++++.-.|.|+.+-.+ +.....+...|++.|+|. |++
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~--i~~ 152 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPL--VSG 152 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCE--EEE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCE--EEe
Confidence 3455566666677766555433333 25788888888988877433 346678889999999997 554
No 224
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=29.17 E-value=1.4e+02 Score=26.54 Aligned_cols=87 Identities=15% Similarity=0.144 Sum_probs=54.2
Q ss_pred HHHHHhhHhcCCCEEEEc-----CCCC----HHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 279 WDDIKFGVDNKVDFYAVS-----FVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lS-----fV~s----a~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImIaRG 348 (387)
.++++.+.+.|+|++-+= |+.+ .+.++++++.. .....+-.++..++. .++..+++ +|+|.+--+
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~~--~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPSD--YVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGGG--GHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHHH--HHHHHHHcCCCEEEECCC
Confidence 356677888999997665 6665 66666665433 223445578877643 47777776 899977422
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
.. + + ...+.++.++++|+.+|.
T Consensus 97 ~~--~---~----~~~~~~~~i~~~g~~igv 118 (228)
T 1h1y_A 97 VS--R---D----NWQELIQSIKAKGMRPGV 118 (228)
T ss_dssp GC--T---T----THHHHHHHHHHTTCEEEE
T ss_pred Cc--c---c----HHHHHHHHHHHcCCCEEE
Confidence 10 0 1 113566777888888763
No 225
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=28.99 E-value=88 Score=30.63 Aligned_cols=66 Identities=6% Similarity=-0.040 Sum_probs=40.9
Q ss_pred HHHHhhHhcCCCEEEEcCCC--------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh--cCeEEEcCCc
Q 016564 280 DDIKFGVDNKVDFYAVSFVK--------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGD 349 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~--------sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--sDGImIaRGD 349 (387)
+.++.+.+.|+|+|.++--. ..+-+..+++.+ ++.||+- .... .+..+++++. +|+|++||+=
T Consensus 259 ~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~-----~iPvi~~-Ggi~-~~~a~~~l~~g~aD~V~igR~~ 331 (377)
T 2r14_A 259 YLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRF-----KGGLIYC-GNYD-AGRAQARLDDNTADAVAFGRPF 331 (377)
T ss_dssp HHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHC-----CSEEEEE-SSCC-HHHHHHHHHTTSCSEEEESHHH
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHC-----CCCEEEE-CCCC-HHHHHHHHHCCCceEEeecHHH
Confidence 33455667899999996411 112233444332 4566653 2222 6777888876 8999999987
Q ss_pred ccc
Q 016564 350 LGA 352 (387)
Q Consensus 350 Lg~ 352 (387)
|+-
T Consensus 332 l~~ 334 (377)
T 2r14_A 332 IAN 334 (377)
T ss_dssp HHC
T ss_pred HhC
Confidence 753
No 226
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=28.98 E-value=1.1e+02 Score=27.66 Aligned_cols=86 Identities=17% Similarity=0.218 Sum_probs=58.0
Q ss_pred HHHHhhHhcCCCEEEE-----cCCC----CHHHHHHHHHHH-HhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEEcCC
Q 016564 280 DDIKFGVDNKVDFYAV-----SFVK----DAQVVHELKNYL-KSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARG 348 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~l-----SfV~----sa~dV~~l~~~L-~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImIaRG 348 (387)
++++.+.+.|+|++-+ .||- .++.++++++.. . ..-+-+-.++++++.. ++..+++ +|.|.+.-
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~--~~~~dvhLmv~~p~~~--i~~~~~aGad~itvH~- 95 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQ--DPFFDMHMMVSKPEQW--VKPMAVAGANQYTFHL- 95 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCS--SSCEEEEEECSCGGGG--HHHHHHHTCSEEEEEG-
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCC--CCcEEEEEEeCCHHHH--HHHHHHcCCCEEEEcc-
Confidence 4567777889999999 8864 456777777654 1 1223445678998754 7777776 89998842
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCccc
Q 016564 349 DLGAELPIEEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 349 DLg~elg~e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
|-+ +. -.+.++.++++|+.+|.
T Consensus 96 ----Ea~-~~----~~~~i~~i~~~G~k~gv 117 (228)
T 3ovp_A 96 ----EAT-EN----PGALIKDIRENGMKVGL 117 (228)
T ss_dssp ----GGC-SC----HHHHHHHHHHTTCEEEE
T ss_pred ----CCc-hh----HHHHHHHHHHcCCCEEE
Confidence 211 12 25678888999988764
No 227
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=28.93 E-value=1.5e+02 Score=22.20 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=38.9
Q ss_pred CCCCeEecCCCEEEEEecCC-CCCccEEEe-ccCCcccccCcCCEEEEeCCeEEEEEEEEe---CCeEEEEEEEC-cEe
Q 016564 184 LPQPITLTSGQEFTFTIQRG-VGSAECVSV-NYDDFVNDVEVGDMLLVDGGMMSLLVKSKT---EDSVKCEVVDG-GEL 256 (387)
Q Consensus 184 l~~~i~Lk~G~~v~lt~~~~-~g~~~~i~v-~~~~l~~~v~~Gd~IliDDG~I~l~V~~v~---~d~v~c~V~~g-G~L 256 (387)
.+..+.+.+|+.++|...-. .-.....|. |-..+...-..--.+.-+++.-.|.+..+. .+...|++.|. |.-
T Consensus 11 ~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 89 (100)
T 3knb_A 11 LPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSD 89 (100)
T ss_dssp CCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEE
Confidence 34567899999999987521 111222332 211121110000123445666678776653 45789999875 443
No 228
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=28.90 E-value=69 Score=29.76 Aligned_cols=53 Identities=21% Similarity=0.154 Sum_probs=33.4
Q ss_pred CCCHHHHHHHH-HhCCceeEeecCCC------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 120 TNTREMIWKLA-EAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 120 s~~~e~i~~Li-~aGm~v~RiN~SHg------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
..+.+.++.|. +.|+|++|+-+.+. +++ +.+.++.+=+...+.+ +.+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~-~~~~ld~~v~~a~~~G---i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPS-VKEKVKEAVEAAIDLD---IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTT-HHHHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHH-HHHHHHHHHHHHHHCC---CEEEEEecc
Confidence 34678899998 57999999987642 233 3333443333333333 678888865
No 229
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=28.87 E-value=2.8e+02 Score=27.44 Aligned_cols=85 Identities=15% Similarity=0.203 Sum_probs=59.7
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEec-CCh-hhhhcHHHHHhh-cCeEEEcCCcccccCC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-ESA-DSIPNLHSIITA-SDGAMVARGDLGAELP 355 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKI-Et~-~gv~NL~eIl~~-sDGImIaRGDLg~elg 355 (387)
.+.|....+.|+|.|-++.- +.++.+.++..-+. .+++++|=| -++ .++. . +++ +|.+=|-+|.++-
T Consensus 49 v~Qi~~l~~aG~diVRvavp-~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~---a-~e~G~dklRINPGNig~--- 118 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRVAVP-HKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL---S-MEKGVHGIRINPGNIGK--- 118 (366)
T ss_dssp HHHHHHHHHTTCCEEEEECC-SHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH---H-HHTTCSEEEECHHHHSC---
T ss_pred HHHHHHHHHcCCCEEEeCCC-ChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH---H-HHhCCCeEEECCcccCc---
Confidence 44456667899999988765 46666666655443 468899987 333 3332 2 334 8999999999873
Q ss_pred CCcHHHHHHHHHHHHHHCCCCc
Q 016564 356 IEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 356 ~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
..--+.++.+|+++|+|+
T Consensus 119 ----~~~~~~vv~~ak~~~~pi 136 (366)
T 3noy_A 119 ----EEIVREIVEEAKRRGVAV 136 (366)
T ss_dssp ----HHHHHHHHHHHHHHTCEE
T ss_pred ----hhHHHHHHHHHHHcCCCE
Confidence 223367999999999995
No 230
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=28.81 E-value=61 Score=31.81 Aligned_cols=65 Identities=9% Similarity=-0.121 Sum_probs=40.0
Q ss_pred HHHHhhHhcCCCEEEEcCCC-----CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh--cCeEEEcCCccc
Q 016564 280 DDIKFGVDNKVDFYAVSFVK-----DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMVARGDLG 351 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~-----sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--sDGImIaRGDLg 351 (387)
+.++...+.|+|+|-++--. -+.++..+++.+ ++.||+ .+.. ..+..+++++. +|+|++||+=|+
T Consensus 270 ~la~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~ir~~~-----~iPvi~-~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 270 HLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSY-----SGVKIS-NLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp HHHHHHGGGCCSEEEEECSCTTSCCCCCHHHHHHTTC-----CSCEEE-ESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHhCCCEEEEcCCCcCCCCccHHHHHHHHHC-----CCcEEE-ECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 34455567899999998521 011144444322 455665 2322 35667788876 899999998766
No 231
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=28.78 E-value=2.6e+02 Score=24.90 Aligned_cols=81 Identities=12% Similarity=-0.025 Sum_probs=49.5
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEEcCCcccccCCCC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImIaRGDLg~elg~e 357 (387)
.+.++.+++.|++.|-+.+- ++...+.++.+..+. .+..+-+-. .---+.++.-+++ +|++..+--|
T Consensus 31 ~~~~~al~~gGv~~iel~~k-~~~~~~~i~~l~~~~-~~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d-------- 98 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNVTLR-TECAVDAIRAIAKEV-PEAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT-------- 98 (214)
T ss_dssp HHHHHHHHHTTCCEEEEESC-STTHHHHHHHHHHHC-TTSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC--------
T ss_pred HHHHHHHHHcCCCEEEEeCC-ChhHHHHHHHHHHHC-cCCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC--------
Confidence 45667888999999999964 555555555444333 344444432 2222455554544 8999866433
Q ss_pred cHHHHHHHHHHHHHHCCCCc
Q 016564 358 EVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 358 ~v~~~Qk~II~~c~aaGKp~ 377 (387)
..+++.|+.+|.+.
T Consensus 99 ------~~v~~~~~~~g~~~ 112 (214)
T 1wbh_A 99 ------EPLLKAATEGTIPL 112 (214)
T ss_dssp ------HHHHHHHHHSSSCE
T ss_pred ------HHHHHHHHHhCCCE
Confidence 25777888888776
No 232
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=28.68 E-value=1.1e+02 Score=27.73 Aligned_cols=62 Identities=11% Similarity=0.127 Sum_probs=36.4
Q ss_pred HhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcCCc-c----cccCCCC-------cHHHHHHHHHHHHHHCCCCc
Q 016564 312 KSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGD-L----GAELPIE-------EVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 312 ~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGD-L----g~elg~e-------~v~~~Qk~II~~c~aaGKp~ 377 (387)
.++|....++.-.++. + ++++++..||+++.-|- + --+-+.+ ........+++.|.+.+||+
T Consensus 38 ~~aG~~pv~lp~~~~~---~-~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~Pi 111 (254)
T 3fij_A 38 QKVGGFPIALPIDDPS---T-AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPI 111 (254)
T ss_dssp HHHTCEEEEECCCCGG---G-HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHCCCEEEEEeCCCch---H-HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCE
Confidence 3456554444333322 2 67788889999998772 1 1111111 12234568889999999995
No 233
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=28.63 E-value=1.5e+02 Score=27.50 Aligned_cols=89 Identities=11% Similarity=0.016 Sum_probs=50.3
Q ss_pred HHhhHhcC-CCEEEEcCCC------------------------C-----HHHHHHHHHHHHhcCCCceEEEe--cCChhh
Q 016564 282 IKFGVDNK-VDFYAVSFVK------------------------D-----AQVVHELKNYLKSCGADIHVIVK--IESADS 329 (387)
Q Consensus 282 I~~a~~~g-vD~I~lSfV~------------------------s-----a~dV~~l~~~L~~~g~~i~IIAK--IEt~~g 329 (387)
.+.+.+.| +|+|.++.-- + +..+..+++.-+.. .++.||+- |.|.+-
T Consensus 180 a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~d 258 (314)
T 2e6f_A 180 AAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGED 258 (314)
T ss_dssp HHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHH
T ss_pred HHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHH
Confidence 45667889 9999876421 0 11233343333332 46777765 666543
Q ss_pred hhcHHHHHhh-cCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCC
Q 016564 330 IPNLHSIITA-SDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 330 v~NL~eIl~~-sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp 376 (387)
+ .+.+.+ +|+|++||+=|. -+..-+..+.+.+-......|..
T Consensus 259 a---~~~l~~GAd~V~ig~~~l~--~~p~~~~~i~~~l~~~~~~~g~~ 301 (314)
T 2e6f_A 259 A---FLHILAGASMVQVGTALQE--EGPGIFTRLEDELLEIMARKGYR 301 (314)
T ss_dssp H---HHHHHHTCSSEEECHHHHH--HCTTHHHHHHHHHHHHHHHHTCC
T ss_pred H---HHHHHcCCCEEEEchhhHh--cCcHHHHHHHHHHHHHHHHcCCC
Confidence 3 333333 999999998664 12233444555566666666643
No 234
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=28.61 E-value=1.2e+02 Score=28.66 Aligned_cols=95 Identities=9% Similarity=-0.067 Sum_probs=54.2
Q ss_pred HHHHHhhHhcCCCEEEEcCCC----------CH--------------HHHHHHHHHHHhcCCCceEEE--ecCChhhhhc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK----------DA--------------QVVHELKNYLKSCGADIHVIV--KIESADSIPN 332 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~----------sa--------------~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~N 332 (387)
.++.+.+.+.|+|+|.+|.-. .. ..+..+.+.....+ ++.||+ -|-|.+-+
T Consensus 195 ~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~-- 271 (332)
T 1vcf_A 195 REAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDG-- 271 (332)
T ss_dssp HHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHH--
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHH--
Confidence 456778889999999996531 11 12222233222222 577776 46665544
Q ss_pred HHHHHhhcCeEEEcCCccccc-CCCC----cHHHHHHHHHHHHHHCCCC
Q 016564 333 LHSIITASDGAMVARGDLGAE-LPIE----EVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 333 L~eIl~~sDGImIaRGDLg~e-lg~e----~v~~~Qk~II~~c~aaGKp 376 (387)
+.-|..=+|+|++||.=|... -|.+ .+..+.+++-..+...|..
T Consensus 272 ~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~ 320 (332)
T 1vcf_A 272 AKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALFAIGAR 320 (332)
T ss_dssp HHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 333333499999999876432 1322 2344456666667777754
No 235
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=28.58 E-value=2.9e+02 Score=26.31 Aligned_cols=91 Identities=10% Similarity=0.078 Sum_probs=51.7
Q ss_pred HHhhHhcCCCEEEEcCCCCHHH---------------HHHHHHHH----HhcCCCceEEEecCChhhhhcHH----HHHh
Q 016564 282 IKFGVDNKVDFYAVSFVKDAQV---------------VHELKNYL----KSCGADIHVIVKIESADSIPNLH----SIIT 338 (387)
Q Consensus 282 I~~a~~~gvD~I~lSfV~sa~d---------------V~~l~~~L----~~~g~~i~IIAKIEt~~gv~NL~----eIl~ 338 (387)
++.+++.|+|+|.+=.+.+-+. ...+...| .+.+.+..|+.+ .|.+-++ +++.
T Consensus 128 l~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~ 203 (309)
T 2aam_A 128 LDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAS 203 (309)
T ss_dssp HHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHH
T ss_pred HHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHh
Confidence 4567889999999998865432 22222222 455666666665 3555556 7777
Q ss_pred hcCeEEEcCCcccccCCC---CcHHHHHHHHHHHHHHCCCCcc
Q 016564 339 ASDGAMVARGDLGAELPI---EEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 339 ~sDGImIaRGDLg~elg~---e~v~~~Qk~II~~c~aaGKp~g 378 (387)
..||++. -++-..-.. ++-......-+..++++|||+=
T Consensus 204 ~id~v~~--Es~~~~~~~~~~~~e~~~~~~~l~~~~~~GkpV~ 244 (309)
T 2aam_A 204 TVSGWAV--ENLFYLKTIPLEENETKSRLEYLIRLNRKGKFIL 244 (309)
T ss_dssp HCSEEEE--ESSSEETTEECCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hcCEEEe--eeEEecCCCCCCHHHHHHHHHHHHHHHHcCCcEE
Confidence 8898876 222221110 1111122345566778899983
No 236
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=28.40 E-value=1.2e+02 Score=29.00 Aligned_cols=49 Identities=12% Similarity=0.203 Sum_probs=37.5
Q ss_pred HHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 124 EMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 124 e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+..+++.++|-+.+.+++.|++.+.-.+.++.+|++. + ..+.|++|..|
T Consensus 146 ~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~---g-~~~~l~vDan~ 194 (366)
T 1tkk_A 146 ADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---G-SAVKLRLDANQ 194 (366)
T ss_dssp HHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH---C-SSSEEEEECTT
T ss_pred HHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh---C-CCCeEEEECCC
Confidence 3456678899999999999988888888888888753 2 23678888753
No 237
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=28.36 E-value=78 Score=30.95 Aligned_cols=89 Identities=13% Similarity=0.089 Sum_probs=50.1
Q ss_pred HHHHHhhHhcCCCEEEEcCCC---------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh----cCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK---------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~---------sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~----sDGImI 345 (387)
.++++.+.+.|+|+|.++.-- +.+-+.++++.+ + ..||+- -|+.+-++++++ +|++|+
T Consensus 236 ~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~---~--~pVia~----GGI~~~~dv~kal~~GAdaV~i 306 (380)
T 1p4c_A 236 AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT---G--KPVLID----SGFRRGSDIVKALALGAEAVLL 306 (380)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH---C--SCEEEC----SSCCSHHHHHHHHHTTCSCEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc---C--CeEEEE----CCCCCHHHHHHHHHhCCcHhhe
Confidence 457888899999999996421 133445555444 2 256653 234444444433 899999
Q ss_pred cCCccccc--CCCC----cHHHHHHHHHHHHHHCCCC
Q 016564 346 ARGDLGAE--LPIE----EVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 346 aRGDLg~e--lg~e----~v~~~Qk~II~~c~aaGKp 376 (387)
||.=|-.- -|.+ .+..+.+.+-..+...|..
T Consensus 307 Gr~~l~~~~~~g~~~v~~~~~~l~~el~~~m~~~G~~ 343 (380)
T 1p4c_A 307 GRATLYGLAARGETGVDEVLTLLKADIDRTLAQIGCP 343 (380)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99755321 0111 2334445555566666643
No 238
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=28.29 E-value=1.8e+02 Score=26.28 Aligned_cols=50 Identities=12% Similarity=0.107 Sum_probs=36.3
Q ss_pred HHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhh
Q 016564 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSI 330 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv 330 (387)
.++...+.|+|+|.+.-.-..+.++.+.+.+++.|..+.+++..-++.+.
T Consensus 83 ~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~ 132 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAE 132 (228)
T ss_dssp HHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGG
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHH
Confidence 34556678999999976666777888888887767666666677666544
No 239
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=28.14 E-value=1.7e+02 Score=25.16 Aligned_cols=36 Identities=8% Similarity=0.034 Sum_probs=28.2
Q ss_pred HHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 016564 282 IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGAD 317 (387)
Q Consensus 282 I~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~ 317 (387)
++.+.+.|+|+|.++-....+.+.++++++.+.|..
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~ 105 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKG 105 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCc
Confidence 467788999999987766667888888888766554
No 240
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=28.03 E-value=67 Score=29.57 Aligned_cols=64 Identities=16% Similarity=0.232 Sum_probs=46.0
Q ss_pred HhhHhcCCCEEEEcCCCCHHH--------HHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh----cCeEEEcCCcc
Q 016564 283 KFGVDNKVDFYAVSFVKDAQV--------VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVARGDL 350 (387)
Q Consensus 283 ~~a~~~gvD~I~lSfV~sa~d--------V~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~----sDGImIaRGDL 350 (387)
..|.+.|++||. |||...+| |+++.++++..+.+..|++ .+++|..+|.++ +|.+-+.+.-|
T Consensus 119 ~~Aa~AGa~yIS-PfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-----AS~Rn~~~v~~aa~~G~d~~Tip~~vl 192 (223)
T 3s1x_A 119 LLAAKAGVTYVS-PFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILV-----ASIRNPIHVLRSAVIGADVVTVPFNVL 192 (223)
T ss_dssp HHHHHTTCSEEE-EBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-----BSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHcCCeEEE-eecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-----EeCCCHHHHHHHHHcCCCEEEeCHHHH
Confidence 346678998665 78875544 6777788888787888887 468888888863 78888765544
Q ss_pred cc
Q 016564 351 GA 352 (387)
Q Consensus 351 g~ 352 (387)
.-
T Consensus 193 ~~ 194 (223)
T 3s1x_A 193 KS 194 (223)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 241
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=28.02 E-value=58 Score=29.74 Aligned_cols=58 Identities=16% Similarity=0.265 Sum_probs=42.4
Q ss_pred hhHhcCCCEEEEcCCCCHHH--------HHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh----cCeEEEcC
Q 016564 284 FGVDNKVDFYAVSFVKDAQV--------VHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVAR 347 (387)
Q Consensus 284 ~a~~~gvD~I~lSfV~sa~d--------V~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~----sDGImIaR 347 (387)
.|.+.|++||. |||...+| |.++.++++..|.+..|++ .+++|..+|.++ +|.+-+.+
T Consensus 118 ~Aa~AGa~yIS-PfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ila-----AS~R~~~~v~~~a~~G~d~~Tip~ 187 (212)
T 3r8r_A 118 LAARAGATYVS-PFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIA-----ASIRHPQHVTEAALRGAHIGTMPL 187 (212)
T ss_dssp HHHHHTCSEEE-EBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEE-----BSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHcCCeEEE-eccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEE-----ecCCCHHHHHHHHHcCCCEEEcCH
Confidence 46778998664 78876554 6677788888787888886 478888888863 67766654
No 242
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=28.01 E-value=61 Score=31.87 Aligned_cols=52 Identities=15% Similarity=0.332 Sum_probs=32.0
Q ss_pred CHHHHHHHHHhCCceeEeecCC-------CCH---HHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 122 TREMIWKLAEAGMNVARLNMSH-------GDH---ASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SH-------g~~---e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+.+.++.|.+.|+|++||-++. +++ ....+.++.+=+...+. -+.+++|+-+
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~---Gi~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNN---SLKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHT---TCEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHC---CCEEEEECCC
Confidence 4788999999999999997752 111 11223333322233333 3788889864
No 243
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=28.00 E-value=1.1e+02 Score=28.25 Aligned_cols=87 Identities=11% Similarity=0.135 Sum_probs=49.3
Q ss_pred EEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHH----------
Q 016564 292 FYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPL---------- 361 (387)
Q Consensus 292 ~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~---------- 361 (387)
.|.+=...++++...+.+.+-+.|-. .|=.-.-|+.+++.+.+|.+..+.+.+|-|-. +-.+.+..
T Consensus 36 vv~Vir~~~~~~a~~~a~al~~gGi~-~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTV---lt~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 36 VIPVIAIDNAEDIIPLGKVLAENGLP-AAEITFRSDAAVEAIRLLRQAQPEMLIGAGTI---LNGEQALAAKEAGATFVV 111 (232)
T ss_dssp EEEEECCSSGGGHHHHHHHHHHTTCC-EEEEETTSTTHHHHHHHHHHHCTTCEEEEECC---CSHHHHHHHHHHTCSEEE
T ss_pred EEEEEEcCCHHHHHHHHHHHHHCCCC-EEEEeCCCCCHHHHHHHHHHhCCCCEEeECCc---CCHHHHHHHHHcCCCEEE
Confidence 45555666666666666655544433 22234556677777777766554555655421 11222211
Q ss_pred ---HHHHHHHHHHHCCCCccccccce
Q 016564 362 ---LQVVFISDIRAMPRMSSSIKAFY 384 (387)
Q Consensus 362 ---~Qk~II~~c~aaGKp~g~id~~~ 384 (387)
.-..+++.|+++|+|+ +-|..
T Consensus 112 sP~~~~~vi~~~~~~gi~~--ipGv~ 135 (232)
T 4e38_A 112 SPGFNPNTVRACQEIGIDI--VPGVN 135 (232)
T ss_dssp CSSCCHHHHHHHHHHTCEE--ECEEC
T ss_pred eCCCCHHHHHHHHHcCCCE--EcCCC
Confidence 1267889999999997 44443
No 244
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=27.43 E-value=79 Score=30.09 Aligned_cols=56 Identities=9% Similarity=0.007 Sum_probs=41.9
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCC-hhhhhcHHHHHhh
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIES-ADSIPNLHSIITA 339 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt-~~gv~NL~eIl~~ 339 (387)
-+++.+...+.|+|.|++..+.+.++++++.+.+ +++++ .+|. ....-+.+|+.+.
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~i-i~~~g~~~~~~~~eL~~l 226 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL-----HIPLM-LVTYGNPQLRDDARLARL 226 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC-----CSCEE-EECTTCGGGCCHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC-----CCCEE-EeCCCCCCCCCHHHHHHc
Confidence 3555566678999999999999888888877644 36677 7775 4567778888765
No 245
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=27.43 E-value=1.5e+02 Score=27.67 Aligned_cols=91 Identities=9% Similarity=0.036 Sum_probs=54.8
Q ss_pred HHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEE--EcCCcccccCCCC-
Q 016564 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM--VARGDLGAELPIE- 357 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGIm--IaRGDLg~elg~e- 357 (387)
-++.+.+.|+|++++|-. -.++..++++.+++.|-+.-.++-=.| ..+.+.+|++.++|++ +.+ .--.|..
T Consensus 108 F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lvaP~t--~~eRi~~ia~~a~gFiY~Vs~---~GvTG~~~ 181 (252)
T 3tha_A 108 FVKKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLVSVTT--PKERVKKLVKHAKGFIYLLAS---IGITGTKS 181 (252)
T ss_dssp HHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEEETTS--CHHHHHHHHTTCCSCEEEECC---SCSSSCSH
T ss_pred HHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeCCCC--cHHHHHHHHHhCCCeEEEEec---CCCCCccc
Confidence 456677899999999987 456677788888776654322222223 2578888988887763 332 0011222
Q ss_pred cHHHHHHHHHHHHHHC-CCCc
Q 016564 358 EVPLLQVVFISDIRAM-PRMS 377 (387)
Q Consensus 358 ~v~~~Qk~II~~c~aa-GKp~ 377 (387)
.+..-.+..++..+++ ++|+
T Consensus 182 ~~~~~~~~~v~~vr~~~~~Pv 202 (252)
T 3tha_A 182 VEEAILQDKVKEIRSFTNLPI 202 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCSCE
T ss_pred CCCHHHHHHHHHHHHhcCCcE
Confidence 2333346677777765 4565
No 246
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=27.42 E-value=54 Score=32.40 Aligned_cols=51 Identities=14% Similarity=0.286 Sum_probs=32.0
Q ss_pred CHHHHHHHHHhCCceeEeecCC-------CCHH--HHHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 016564 122 TREMIWKLAEAGMNVARLNMSH-------GDHA--SHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SH-------g~~e--~~~~~I~~iR~~~~~~~~~~i~I~lDL~ 175 (387)
+.+.++.|.++|+|++||-+++ +++- ...+.++.+=+...+. -+.|++||-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~---Gl~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKN---NIRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHT---TCEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHC---CCEEEEEec
Confidence 4789999999999999998863 2221 1223333332333333 388999974
No 247
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=27.39 E-value=1.9e+02 Score=28.28 Aligned_cols=65 Identities=11% Similarity=0.134 Sum_probs=44.6
Q ss_pred CCceEEEec-CCCCCCHHHH-----HHHHHhCCceeEeecCCC------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 016564 108 RKTKIVCTI-GPSTNTREMI-----WKLAEAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (387)
Q Consensus 108 r~TKII~TI-GPss~~~e~i-----~~Li~aGm~v~RiN~SHg------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~ 175 (387)
.+....+|+ |....+++.+ +++++.|.+.+.|..... +.++-.+.++.+|++. + ..+.+++|..
T Consensus 124 ~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~---g-~~~~l~vDaN 199 (393)
T 4dwd_A 124 TRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELL---G-PDAVIGFDAN 199 (393)
T ss_dssp SEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHH---C-TTCCEEEECT
T ss_pred CceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHh---C-CCCeEEEECC
Confidence 356677887 4433455544 666788999999999654 6777777888888753 2 2367888876
Q ss_pred C
Q 016564 176 G 176 (387)
Q Consensus 176 G 176 (387)
|
T Consensus 200 ~ 200 (393)
T 4dwd_A 200 N 200 (393)
T ss_dssp T
T ss_pred C
Confidence 4
No 248
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=27.39 E-value=1.6e+02 Score=28.46 Aligned_cols=61 Identities=10% Similarity=0.101 Sum_probs=44.3
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhh--hhcHHHHHhh-cCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADS--IPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~g--v~NL~eIl~~-sDGImIaR 347 (387)
.+.++.+++.|+|+|.+-.. ++++++++.+.+. .++.|.| --| .+|+.++++. +|+|-+|.
T Consensus 241 ldea~eAl~aGaD~I~LDn~-~~~~l~~av~~l~---~~v~iea----SGGIt~~~I~~~a~tGVD~isvGa 304 (320)
T 3paj_A 241 LAELEEAISAGADIIMLDNF-SLEMMREAVKINA---GRAALEN----SGNITLDNLKECAETGVDYISVGA 304 (320)
T ss_dssp HHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TSSEEEE----ESSCCHHHHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE----ECCCCHHHHHHHHHcCCCEEEECc
Confidence 45677788999999999886 7788888887764 3444333 222 5688888877 89888864
No 249
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=27.38 E-value=1.5e+02 Score=26.35 Aligned_cols=87 Identities=8% Similarity=-0.056 Sum_probs=51.5
Q ss_pred HHHHHhhHhcCCCEEEEcCCCC-----HHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEcCCcc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKD-----AQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARGDL 350 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~s-----a~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIaRGDL 350 (387)
.+.++.+.+.|++.|.+.-+.. .-++..++++... .+++|+|- |-+ .+++.++.++ +||+++|++=+
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~--~~ipvia~GGI~~---~~d~~~~~~~Gadgv~vGsal~ 228 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL--TTLPIIASGGAGK---MEHFLEAFLAGADAALAASVFH 228 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGG--CCSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHh--cCCCEEEECCCCC---HHHHHHHHHcCChHHHHHHHHH
Confidence 3456777889999888853321 1134444443322 25667763 333 3556666655 89999998765
Q ss_pred cccCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 351 GAELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 351 g~elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
...+. .++.++.++++|.++
T Consensus 229 ~~~~~-------~~~~~~~l~~~g~~~ 248 (253)
T 1thf_D 229 FREID-------VRELKEYLKKHGVNV 248 (253)
T ss_dssp TTCSC-------HHHHHHHHHHTTCCC
T ss_pred cCCCC-------HHHHHHHHHHcCCcc
Confidence 54433 233445567778765
No 250
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=27.32 E-value=89 Score=23.30 Aligned_cols=29 Identities=21% Similarity=0.363 Sum_probs=23.5
Q ss_pred cCcCCEEEEeCCeEEEEEEEEeCCeEEEEE
Q 016564 221 VEVGDMLLVDGGMMSLLVKSKTEDSVKCEV 250 (387)
Q Consensus 221 v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V 250 (387)
-++|..|.|.| .|..+|.++.++.|..=+
T Consensus 8 Rk~GE~I~Igd-~I~I~Vl~i~g~~VrlGI 36 (63)
T 2bti_A 8 RRVGETLMIGD-EVTVTVLGVKGNQVRIGV 36 (63)
T ss_dssp EETTCEEEETT-TEEEEEEEEETTEEEEEE
T ss_pred ccCCCeEEeCC-CEEEEEEEEeCCEEEEEE
Confidence 37899999987 699999999988876533
No 251
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=27.28 E-value=1.3e+02 Score=27.79 Aligned_cols=59 Identities=15% Similarity=0.163 Sum_probs=43.7
Q ss_pred HHHHHhhHhcCCCEEEEcCCC--CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK--DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~--sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImI 345 (387)
.+.+..+++.|.|.|.+..-. +.+++.++.+.+++ .+++++...=+++++ ..-+|++++
T Consensus 26 ~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~--~~~Piil~p~~~~~~------~~gaD~il~ 86 (235)
T 3w01_A 26 DDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR--YPLPLVLEISNIESV------MPGFDFYFV 86 (235)
T ss_dssp HHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT--SCSCEEEECCCSTTC------CTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC--cCCCEEEecCCHHHh------hcCCCEEEE
Confidence 345566689999999999876 67888888888865 567777665555433 557999998
No 252
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=27.22 E-value=1.4e+02 Score=28.63 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=42.7
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCC
Q 016564 109 KTKIVCTIGPSTNTR----EMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTK 175 (387)
Q Consensus 109 ~TKII~TIGPss~~~----e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~ 175 (387)
+.....|+|- .++ +..+++.++|-+.+.+++.|++.+.-.+.++.+|++ .+ ..+.+++|..
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g-~~~~l~vDan 198 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG---LP-DGHRVTFDVN 198 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS---CC-TTCEEEEECT
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH---hC-CCCEEEEeCC
Confidence 4556677764 234 345667889999999999998777777777777753 22 2367888864
No 253
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=27.19 E-value=1.3e+02 Score=26.70 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=44.2
Q ss_pred HHHhhHhcCCCEEEEcCCCCH-----HHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-------cCeEEEc
Q 016564 281 DIKFGVDNKVDFYAVSFVKDA-----QVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-------SDGAMVA 346 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~sa-----~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-------sDGImIa 346 (387)
.++.+.+.|+++|.+.-+..- -++..++++.... ++++||- |-| .+++.++.+. +||+|||
T Consensus 149 ~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~--~iPvia~GGI~~---~~d~~~~~~~~~~~~G~adgv~vg 223 (241)
T 1qo2_A 149 LLKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEA--EVKVLAAGGISS---ENSLKTAQKVHTETNGLLKGVIVG 223 (241)
T ss_dssp HHHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHHH--TCEEEEESSCCS---HHHHHHHHHHHHHTTTSEEEEEEC
T ss_pred HHHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHhc--CCcEEEECCCCC---HHHHHHHHhcccccCCeEeEEEee
Confidence 356677899999888554210 1233343333221 5677774 444 4455555555 8999999
Q ss_pred CCcccccCCCCc
Q 016564 347 RGDLGAELPIEE 358 (387)
Q Consensus 347 RGDLg~elg~e~ 358 (387)
++=+...+.+++
T Consensus 224 sal~~~~~~~~~ 235 (241)
T 1qo2_A 224 RAFLEGILTVEV 235 (241)
T ss_dssp HHHHTTSSCHHH
T ss_pred HHHHcCCCCHHH
Confidence 987777776543
No 254
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=27.15 E-value=1.9e+02 Score=25.58 Aligned_cols=65 Identities=9% Similarity=0.118 Sum_probs=42.6
Q ss_pred HHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHh---hcCeEEEcC
Q 016564 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT---ASDGAMVAR 347 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~---~sDGImIaR 347 (387)
.++.+.+.|+|+|.+..-.+.+.+.++.+.+.+.| ..++.-+....-++.+.+++. .+|.+.+..
T Consensus 79 ~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~s 146 (228)
T 1h1y_A 79 YVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMT 146 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEES
T ss_pred HHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEe
Confidence 46777889999999988776655234444454444 445555533333566888888 799888843
No 255
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=27.00 E-value=73 Score=30.39 Aligned_cols=53 Identities=19% Similarity=0.255 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCceeEeec-CCCC-------HHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCee
Q 016564 123 REMIWKLAEAGMNVARLNM-SHGD-------HASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEV 179 (387)
Q Consensus 123 ~e~i~~Li~aGm~v~RiN~-SHg~-------~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkI 179 (387)
.+..++|+++|.++.=||. |-.. .+++.+++..|+...++ .++|.+|+.=|++
T Consensus 49 ~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~----~vpiSIDT~~~~V 109 (294)
T 2y5s_A 49 LRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL----NVPLSIDTYKPAV 109 (294)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG----CSCEEEECCCHHH
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC----CCeEEEECCCHHH
Confidence 3677899999999999999 4222 57788888888876543 3678999986654
No 256
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=26.99 E-value=73 Score=26.35 Aligned_cols=41 Identities=22% Similarity=0.183 Sum_probs=27.7
Q ss_pred HHHhhHhcCCCEEEEcCCCC--HHHHHHHHHHHHhcCC-CceEE
Q 016564 281 DIKFGVDNKVDFYAVSFVKD--AQVVHELKNYLKSCGA-DIHVI 321 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~s--a~dV~~l~~~L~~~g~-~i~II 321 (387)
.++.+.+.++|.|++|...+ ...+.++.+.|++.+. +++|+
T Consensus 46 ~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~ 89 (137)
T 1ccw_A 46 FIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLY 89 (137)
T ss_dssp HHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEE
T ss_pred HHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEE
Confidence 35667778999999998654 4456666677776664 45554
No 257
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=26.93 E-value=2.9e+02 Score=25.58 Aligned_cols=68 Identities=6% Similarity=0.058 Sum_probs=50.1
Q ss_pred HHHHHhhHhcCCCEEEEcCCC--C---------HHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK--D---------AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVAR 347 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~--s---------a~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaR 347 (387)
++.++.+.+.|+|+|....-. + .+.++.++++..+. .+.+++-+-.+..++-+.+. .|.+-||.
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kIga 114 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAKY---SDILQIGA 114 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHHH---CSEEEECG
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHhh---CCEEEECc
Confidence 555677788999988776432 1 67888888888654 46788888888887666664 79999988
Q ss_pred Cccc
Q 016564 348 GDLG 351 (387)
Q Consensus 348 GDLg 351 (387)
+++.
T Consensus 115 ~~~~ 118 (262)
T 1zco_A 115 RNSQ 118 (262)
T ss_dssp GGTT
T ss_pred cccc
Confidence 7643
No 258
>3s9z_A Malate synthase G; inhibitor complex, structural genomics, mycobacterium tuberc structural proteomics project, XMTB; HET: I92; 1.79A {Mycobacterium tuberculosis} PDB: 3s9i_A* 3sad_A* 3saz_A* 3sb0_A* 1n8i_A 1n8w_A* 2gq3_A* 4ex4_A
Probab=26.82 E-value=99 Score=33.26 Aligned_cols=51 Identities=12% Similarity=0.031 Sum_probs=41.1
Q ss_pred CCEEEEcCCCCHHHHHHHHHHHH-------hcCCCceEEEecCChhhhhcHHHHHhhc
Q 016564 290 VDFYAVSFVKDAQVVHELKNYLK-------SCGADIHVIVKIESADSIPNLHSIITAS 340 (387)
Q Consensus 290 vD~I~lSfV~sa~dV~~l~~~L~-------~~g~~i~IIAKIEt~~gv~NL~eIl~~s 340 (387)
-=||..|+.++++++.-..++.. -....+++-.+|||..+.-|++||+.+.
T Consensus 392 siYivkPKmhgp~Evaf~~~lF~~vE~~LgLp~~TiK~gVmdEerrts~nl~eci~al 449 (741)
T 3s9z_A 392 SIYIVKPKMHGPAEVAFTCELFSRVEDVLGLPQNTMKIGIMDEERRTTVNLKACIKAA 449 (741)
T ss_dssp CEEEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCEEEEEEECSHHHHTTHHHHHHHT
T ss_pred ceeEEecCCCChHHHHHHHHHHHHHHHHhCCCCCcEEEEEEeccchhhhhHHHHHHHH
Confidence 44899999999999976554442 2234689999999999999999999873
No 259
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=26.72 E-value=1.8e+02 Score=26.61 Aligned_cols=67 Identities=4% Similarity=0.022 Sum_probs=42.8
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcC-CCceEEEecCChhhhhcHHHHHhh-cCeEEE
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCG-ADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g-~~i~IIAKIEt~~gv~NL~eIl~~-sDGImI 345 (387)
..+.++.+...|+|+|++-.=..+.+-.+++.++.... ....++..|=..+-- .+..++.. +||||+
T Consensus 29 ~p~~~e~a~~~gaD~v~lDlEd~p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~-~i~~~l~~g~~gI~~ 97 (256)
T 1dxe_A 29 NPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPV-IIKRLLDIGFYNFLI 97 (256)
T ss_dssp SHHHHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTTCSSEEEEECSSSCHH-HHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEECCCCCHH-HHHHHHhcCCceeee
Confidence 45567777888999999987777777777777765432 234566666432221 15555554 567776
No 260
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=26.60 E-value=1.1e+02 Score=28.86 Aligned_cols=64 Identities=9% Similarity=0.109 Sum_probs=45.1
Q ss_pred HHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHh-----------hcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHH
Q 016564 304 VHELKNYLKSCGADIHVIVKIESADSIPNLHSIIT-----------ASDGAMVARGDLGAELPIEEVPLLQVVFISDIRA 372 (387)
Q Consensus 304 V~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~-----------~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~a 372 (387)
+..+++.|.+.|.++.|.+--+.....+|+++++. -.|.|+-+- +-+..+..|-++|.+
T Consensus 91 a~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~----------Dn~~~R~~in~~c~~ 160 (292)
T 3h8v_A 91 VQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV----------DNFEARMTINTACNE 160 (292)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC----------SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC----------cchhhhhHHHHHHHH
Confidence 34556777788888888887666666677877763 355555332 234567789999999
Q ss_pred CCCCc
Q 016564 373 MPRMS 377 (387)
Q Consensus 373 aGKp~ 377 (387)
+|+|.
T Consensus 161 ~~~Pl 165 (292)
T 3h8v_A 161 LGQTW 165 (292)
T ss_dssp HTCCE
T ss_pred hCCCE
Confidence 99997
No 261
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=26.48 E-value=90 Score=23.98 Aligned_cols=31 Identities=19% Similarity=0.327 Sum_probs=25.4
Q ss_pred cccccCcCCEEEEeCCeEEEEEEEEeCCeEEE
Q 016564 217 FVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKC 248 (387)
Q Consensus 217 l~~~v~~Gd~IliDDG~I~l~V~~v~~d~v~c 248 (387)
|+=.=++|..|.|.| .|..+|.++.++.|..
T Consensus 14 LvLtRK~GEsI~IGd-dI~ItVl~i~g~qVrL 44 (73)
T 1vpz_A 14 LILTRRVGETLMVGD-DVTVTVLGVKGNQVRI 44 (73)
T ss_dssp EEEEEETTCEEEETT-TEEEEEEEEETTEEEE
T ss_pred EEEEccCCCEEEeCC-CEEEEEEEEeCCEEEE
Confidence 444558899999988 7999999999988765
No 262
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=26.44 E-value=1.1e+02 Score=27.10 Aligned_cols=68 Identities=10% Similarity=0.055 Sum_probs=41.3
Q ss_pred HHHHHhhHhcCCCEEEEcC-----CCCHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEcCCcc
Q 016564 279 WDDIKFGVDNKVDFYAVSF-----VKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARGDL 350 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSf-----V~sa~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIaRGDL 350 (387)
.+.++...+.|+|+|.++- ......+..+++..+. .++++++. |-+. +.+++.++. +|++++++..|
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~--~~iPvi~~Ggi~~~---~~~~~~~~~Gad~V~lg~~~l 108 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISATHEERAILLDVVARVAER--VFIPLTVGGGVRSL---EDARKLLLSGADKVSVNSAAV 108 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT--CCSCEEEESSCCSH---HHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh--CCCCEEEECCcCCH---HHHHHHHHcCCCEEEEChHHH
Confidence 4445666788999988752 2333445555544332 35666663 4433 345555555 89999998776
Q ss_pred c
Q 016564 351 G 351 (387)
Q Consensus 351 g 351 (387)
.
T Consensus 109 ~ 109 (252)
T 1ka9_F 109 R 109 (252)
T ss_dssp H
T ss_pred h
Confidence 4
No 263
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=26.40 E-value=1.8e+02 Score=26.44 Aligned_cols=67 Identities=12% Similarity=0.044 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCcccccc
Q 016564 303 VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKA 382 (387)
Q Consensus 303 dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~ 382 (387)
.++.+++.+.+.+.++.|.+--+... -+|+++++...|.|+-+-.+ +..+..+-+.|+++++|. |++
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~~p~--i~~ 149 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDN----------MATRQEINAACVALNTPL--ITA 149 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSS----------HHHHHHHHHHHHHTTCCE--EEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHhCCCE--EEE
Confidence 34456667777777777666444332 26788888888988876332 235678889999999997 554
No 264
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=26.39 E-value=24 Score=33.53 Aligned_cols=64 Identities=20% Similarity=0.210 Sum_probs=37.3
Q ss_pred HHHHhhHhcCCCEEEEcCCCC------HHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHh--hcCeEEEcCCc
Q 016564 280 DDIKFGVDNKVDFYAVSFVKD------AQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIIT--ASDGAMVARGD 349 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~s------a~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~--~sDGImIaRGD 349 (387)
+.++.+.+.|+|+|.++--.. ..+.. ++.+.-.++.||+- |-|.+- +.++++ -+|+|||||+=
T Consensus 144 ~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~----~i~~i~~~ipVi~~GgI~s~~d---a~~~l~~~gad~V~iGR~~ 216 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRTVVQSFTGRAEWK----ALSVLEKRIPTFVSGDIFTPED---AKRALEESGCDGLLVARGA 216 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTTTSSCCCGG----GGGGSCCSSCEEEESSCCSHHH---HHHHHHHHCCSEEEESGGG
T ss_pred HHHHHHHHhCCCEEEEcCCCccccCCCCcCHH----HHHHHHcCCeEEEECCcCCHHH---HHHHHHcCCCCEEEECHHH
Confidence 667778889999999963211 11111 11111115667764 555443 344454 38999999984
Q ss_pred c
Q 016564 350 L 350 (387)
Q Consensus 350 L 350 (387)
|
T Consensus 217 l 217 (318)
T 1vhn_A 217 I 217 (318)
T ss_dssp T
T ss_pred H
Confidence 3
No 265
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=26.15 E-value=1.1e+02 Score=27.62 Aligned_cols=81 Identities=9% Similarity=0.044 Sum_probs=51.6
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceE-EEecCChhhhhcHHHHHhh-cCeEEEcCCcccccCCC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPI 356 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~I-IAKIEt~~gv~NL~eIl~~-sDGImIaRGDLg~elg~ 356 (387)
....+.+.+.|+|++.+|= ..++++..+|+.+. . ..+ ..=|=- +| .+..+.++. +|.++|||+=...+=|.
T Consensus 125 ~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~---~-~~~vtPGI~~-~g-~tp~~a~~~Gad~iVVGR~I~~A~dP~ 197 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGG-TKLDHITQYRRDFE---K-MTIVSPGMGS-QG-GSYGDAVCAGADYEIIGRSIYNAGNPL 197 (222)
T ss_dssp HHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHCT---T-CEEEECCBST-TS-BCTTHHHHHTCSEEEECHHHHTSSSHH
T ss_pred HHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhCC---C-CEEEcCCccc-Cc-cCHHHHHHcCCCEEEECHHhcCCCCHH
Confidence 4556677889999998874 34678888887652 3 332 333422 22 145555555 99999999988887666
Q ss_pred CcHHHHHHHH
Q 016564 357 EEVPLLQVVF 366 (387)
Q Consensus 357 e~v~~~Qk~I 366 (387)
+....++++|
T Consensus 198 ~aa~~i~~~i 207 (222)
T 4dbe_A 198 TALRTINKII 207 (222)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5444444444
No 266
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.05 E-value=1.9e+02 Score=27.00 Aligned_cols=63 Identities=13% Similarity=0.057 Sum_probs=42.6
Q ss_pred HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEE
Q 016564 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV 345 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImI 345 (387)
+-++.+.+.|+|++.+|-.- .++..++.+++++.|-+.-.++-=.| ..+.+..|++.++|++-
T Consensus 114 ~f~~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~gl~~i~liaP~t--~~eri~~i~~~~~gfvY 176 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADVP-VEESAPFSKAAKAHGIAPIFIAPPNA--DADTLKMVSEQGEGYTY 176 (267)
T ss_dssp HHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEECEECTTC--CHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHHhCCCcEE
Confidence 34667778899999998653 46677788888776655322332233 35788999988876543
No 267
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=26.03 E-value=2.4e+02 Score=26.08 Aligned_cols=29 Identities=10% Similarity=0.026 Sum_probs=22.2
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCceeEeec
Q 016564 109 KTKIVCTIGPSTNTREMIWKLAEAGMNVARLNM 141 (387)
Q Consensus 109 ~TKII~TIGPss~~~e~i~~Li~aGm~v~RiN~ 141 (387)
.+++.+-+ | +.+.++..+++|++.+++-+
T Consensus 72 ~~~v~~l~-~---n~~~i~~a~~~G~~~V~i~~ 100 (295)
T 1ydn_A 72 GVRYSVLV-P---NMKGYEAAAAAHADEIAVFI 100 (295)
T ss_dssp SSEEEEEC-S---SHHHHHHHHHTTCSEEEEEE
T ss_pred CCEEEEEe-C---CHHHHHHHHHCCCCEEEEEE
Confidence 45664433 3 58999999999999999984
No 268
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=25.82 E-value=5.1e+02 Score=25.86 Aligned_cols=93 Identities=19% Similarity=0.119 Sum_probs=53.3
Q ss_pred ccHHHHHhhHhcCCCEEEE--cCCCCH---HHHHHHHHHHHhcCCCceEEEe-cCChhhhhcHHHHHhh-cCeEEEcC--
Q 016564 277 KDWDDIKFGVDNKVDFYAV--SFVKDA---QVVHELKNYLKSCGADIHVIVK-IESADSIPNLHSIITA-SDGAMVAR-- 347 (387)
Q Consensus 277 ~D~~dI~~a~~~gvD~I~l--SfV~sa---~dV~~l~~~L~~~g~~i~IIAK-IEt~~gv~NL~eIl~~-sDGImIaR-- 347 (387)
...+.++.+++.|+|+|.+ ++-... +.++.+++.+ .++.|+++ +.|.+....+. ++ +|+|.++.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~----~~~pvi~~~v~t~~~a~~l~---~aGad~I~vg~~~ 327 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY----PHLQVIGGNVVTAAQAKNLI---DAGVDGLRVGMGC 327 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC----TTCEEEEEEECSHHHHHHHH---HHTCSEEEECSSC
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC----CCCceEecccchHHHHHHHH---HcCCCEEEECCCC
Confidence 4567788889999999998 433332 2333333322 36788875 77766654443 33 89999954
Q ss_pred Cccccc-----CCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 348 GDLGAE-----LPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 348 GDLg~e-----lg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
|-.... .|.. .+.....+-+.+++.++|+
T Consensus 328 G~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipV 361 (514)
T 1jcn_A 328 GSICITQEVMACGRP-QGTAVYKVAEYARRFGVPI 361 (514)
T ss_dssp SCCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCE
T ss_pred CcccccccccCCCcc-chhHHHHHHHHHhhCCCCE
Confidence 311000 1221 2333455556666678886
No 269
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=25.52 E-value=2.7e+02 Score=26.63 Aligned_cols=66 Identities=12% Similarity=0.177 Sum_probs=0.0
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCH---------------HHHHHHHHHHHhcCCCceEEEecCCh------hhhhcHHHHH
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDA---------------QVVHELKNYLKSCGADIHVIVKIESA------DSIPNLHSII 337 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa---------------~dV~~l~~~L~~~g~~i~IIAKIEt~------~gv~NL~eIl 337 (387)
.+.++...+.|+++|-+==-..+ +.+..++..... +.+..|+|+.|.. ++++......
T Consensus 107 ~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~ 185 (305)
T 3ih1_A 107 ARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYV 185 (305)
T ss_dssp HHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHH
Q ss_pred hh-cCeEEE
Q 016564 338 TA-SDGAMV 345 (387)
Q Consensus 338 ~~-sDGImI 345 (387)
++ +|+|++
T Consensus 186 eAGAD~i~~ 194 (305)
T 3ih1_A 186 KAGADAIFP 194 (305)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
No 270
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=25.29 E-value=1.3e+02 Score=29.15 Aligned_cols=64 Identities=14% Similarity=0.186 Sum_probs=43.8
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 109 KTKIVCTIGPSTNTR----EMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 109 ~TKII~TIGPss~~~----e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+....+|+|....++ +..+++.++|-+.+.|++.|++.+.-.+.++.||++ .+ ..+.|++|..|
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G-~~~~l~vDan~ 199 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTC---VP-AGSKVMIDPNE 199 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTT---SC-TTCEEEEECTT
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHh---hC-CCCeEEEECCC
Confidence 445666665422234 345677889999999999998887777777777753 22 33678888754
No 271
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=25.26 E-value=1.4e+02 Score=26.30 Aligned_cols=63 Identities=13% Similarity=0.185 Sum_probs=40.6
Q ss_pred HHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceE-EEecCChhhhhcHHHHHh-hcCeEEEcC
Q 016564 282 IKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHV-IVKIESADSIPNLHSIIT-ASDGAMVAR 347 (387)
Q Consensus 282 I~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~I-IAKIEt~~gv~NL~eIl~-~sDGImIaR 347 (387)
++.+.+.|+|+|.++-.-..+.++++.+.+++.|....+ +...-|.+ .+.++.+ -.|-+.+..
T Consensus 76 ~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~---~~~~~~~~g~d~v~~~~ 140 (218)
T 3jr2_A 76 SRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQ---DAKAWVDLGITQAIYHR 140 (218)
T ss_dssp HHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHH---HHHHHHHTTCCEEEEEC
T ss_pred HHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHH---HHHHHHHcCccceeeee
Confidence 466788999999999877666788888878776655443 33345653 3444444 367554433
No 272
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.24 E-value=62 Score=23.34 Aligned_cols=45 Identities=16% Similarity=0.098 Sum_probs=29.4
Q ss_pred ccCcCCEEEEeCCe---EEEEEEEEeCCeEEEEEEECcEecCCcceeeCCC
Q 016564 220 DVEVGDMLLVDGGM---MSLLVKSKTEDSVKCEVVDGGELKSRRHLNVRGK 267 (387)
Q Consensus 220 ~v~~Gd~IliDDG~---I~l~V~~v~~d~v~c~V~~gG~L~s~KgVn~p~~ 267 (387)
.+++||.|.+-+|- +.-+|.+++.+.+...+...|. . ..+.+|..
T Consensus 7 ~f~~GD~V~V~~Gpf~g~~G~V~evd~e~v~V~v~~fg~-~--tpvel~~~ 54 (59)
T 2e6z_A 7 GFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDL-K--DMLEFPAQ 54 (59)
T ss_dssp SCCTTSEEEECSSTTTTCEEEECCCBTTEEEEEECCSSC-C--SCEEEETT
T ss_pred cCCCCCEEEEeecCCCCCEEEEEEEeCCEEEEEEEecCC-C--ceEEEcHH
Confidence 45788888888884 6788888888755555544443 1 25555543
No 273
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=25.20 E-value=2.5e+02 Score=24.54 Aligned_cols=99 Identities=6% Similarity=0.068 Sum_probs=55.9
Q ss_pred HHHHhhHhcCCCEEEEc-CCC-----CHHHHHHHHHHHHhcCCCceEE-Ee--cC--C----hhhhhcHHHHHhh-----
Q 016564 280 DDIKFGVDNKVDFYAVS-FVK-----DAQVVHELKNYLKSCGADIHVI-VK--IE--S----ADSIPNLHSIITA----- 339 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lS-fV~-----sa~dV~~l~~~L~~~g~~i~II-AK--IE--t----~~gv~NL~eIl~~----- 339 (387)
+.++.+.+.|.|+|=+. .-. +..++.++++.+.+.|-.+..+ +- +- . ..+++.+...++.
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 97 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLG 97 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 45678889999999988 321 2367788888888776543312 11 21 1 1245555555554
Q ss_pred cCeEEEcCCcccccCC----CCcHHHHHHHHHHHHHHCCCCcc
Q 016564 340 SDGAMVARGDLGAELP----IEEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 340 sDGImIaRGDLg~elg----~e~v~~~Qk~II~~c~aaGKp~g 378 (387)
++.|.+..|.-.-..+ ++.+...-+++...|+++|..++
T Consensus 98 ~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~ 140 (278)
T 1i60_A 98 VKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIA 140 (278)
T ss_dssp CCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred CCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEE
Confidence 4566554432111122 12334444677777777777653
No 274
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=25.12 E-value=1.4e+02 Score=26.44 Aligned_cols=87 Identities=13% Similarity=0.051 Sum_probs=52.4
Q ss_pred HHHHHhhHhcCCCEEEEcCCC-C----HHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEcCCcc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK-D----AQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVARGDL 350 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~-s----a~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIaRGDL 350 (387)
.+.++.+.+.|++.|.+.-.. + .-++..++++.... +++++|- |-++ +++.++.+. +||+|+|++=+
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~--~ipvia~GGI~~~---~d~~~~~~~Gadgv~vgsal~ 229 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAV--GVPVIASGGAGRM---EHFLEAFQAGAEAALAASVFH 229 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCSH---HHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHc--CCCEEEeCCCCCH---HHHHHHHHCCCHHHHHHHHHH
Confidence 455677778899988875221 1 11344444433322 5667763 4443 566666665 89999998877
Q ss_pred cccCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 351 GAELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 351 g~elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
...+.+++ +.+.++..|.++
T Consensus 230 ~~~~~~~~-------~~~~l~~~~~~~ 249 (252)
T 1ka9_F 230 FGEIPIPK-------LKRYLAEKGVHV 249 (252)
T ss_dssp TTSSCHHH-------HHHHHHHTTCCB
T ss_pred cCCCCHHH-------HHHHHHHCCCCc
Confidence 66555432 344567778775
No 275
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=25.12 E-value=1.3e+02 Score=28.98 Aligned_cols=65 Identities=14% Similarity=0.036 Sum_probs=39.5
Q ss_pred HHHhhHhcCCCEEEEcCCC-------------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh--cCeEEE
Q 016564 281 DIKFGVDNKVDFYAVSFVK-------------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMV 345 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~-------------sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--sDGImI 345 (387)
.++...+.|+|+|-+|--. ..+-+..+++.+ ++.|++- ......+..+++++. +|.|++
T Consensus 251 la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~~-GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 251 LARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA-----KLPVTSA-WGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp HHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-----TCCEEEC-SSTTSHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-----CCcEEEe-CCCCCHHHHHHHHHCCCccEEEe
Confidence 3455667899999998411 122334444443 3555542 333344566777776 899999
Q ss_pred cCCccc
Q 016564 346 ARGDLG 351 (387)
Q Consensus 346 aRGDLg 351 (387)
||+=|+
T Consensus 325 GR~~la 330 (363)
T 3l5l_A 325 GRAHLA 330 (363)
T ss_dssp CHHHHH
T ss_pred cHHHHh
Confidence 998554
No 276
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=25.00 E-value=69 Score=31.01 Aligned_cols=53 Identities=13% Similarity=0.199 Sum_probs=39.5
Q ss_pred HHHHHHHHhCCceeEeecCC---CC---------HHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCCee
Q 016564 124 EMIWKLAEAGMNVARLNMSH---GD---------HASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEV 179 (387)
Q Consensus 124 e~i~~Li~aGm~v~RiN~SH---g~---------~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GPkI 179 (387)
+..++|+++|.++.=||.-- |. .+++.+++..|+...+.. .++|.+|+.=|++
T Consensus 53 ~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~---~vpISIDT~~~~V 117 (314)
T 3tr9_A 53 RTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF---PQLISVDTSRPRV 117 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC---CSEEEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC---CCeEEEeCCCHHH
Confidence 57789999999999999732 21 466777777777766543 3789999987654
No 277
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=24.89 E-value=1.6e+02 Score=28.18 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=49.8
Q ss_pred HHHHHhhHhcCCCEEEEcCCC--CHHHHHHHHHHHHhcCCCceEEEe--c-CChhhhhcHHHHHhh-cCeEEEcCCcccc
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK--DAQVVHELKNYLKSCGADIHVIVK--I-ESADSIPNLHSIITA-SDGAMVARGDLGA 352 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~--sa~dV~~l~~~L~~~g~~i~IIAK--I-Et~~gv~NL~eIl~~-sDGImIaRGDLg~ 352 (387)
.+||..+.+.|+|+|.+-+-. ..-|+..+++++..++. ..+.-- + ++++-.+.+++++.. .|.|+-.-+--++
T Consensus 114 ~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a 192 (287)
T 3iwp_A 114 KADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSA 192 (287)
T ss_dssp HHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSST
T ss_pred HHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCh
Confidence 457888999999999999843 33577788888876543 222110 1 223455667777774 7888887765444
Q ss_pred cCCC
Q 016564 353 ELPI 356 (387)
Q Consensus 353 elg~ 356 (387)
.-|+
T Consensus 193 ~~Gl 196 (287)
T 3iwp_A 193 LEGL 196 (287)
T ss_dssp TTTH
T ss_pred HHhH
Confidence 3343
No 278
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=24.86 E-value=3.1e+02 Score=25.64 Aligned_cols=59 Identities=8% Similarity=0.044 Sum_probs=38.8
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImI 345 (387)
.+.++.+.+.|+|+|.+.+-...+.++.+ ++. .++++.++-|.+-...+. ..-+|+|.+
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~l----~~~--gi~vi~~v~t~~~a~~~~--~~GaD~i~v 144 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAEF----RRH--GVKVIHKCTAVRHALKAE--RLGVDAVSI 144 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHHH----HHT--TCEEEEEESSHHHHHHHH--HTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHHH----HHc--CCCEEeeCCCHHHHHHHH--HcCCCEEEE
Confidence 45677888999999999986554444443 333 577888887765433211 123899998
No 279
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=24.82 E-value=1.1e+02 Score=28.56 Aligned_cols=69 Identities=22% Similarity=0.172 Sum_probs=46.0
Q ss_pred HhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEE-EecCChhhh--------hcHHHHHhh-cCeEEEcCCcccc
Q 016564 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVI-VKIESADSI--------PNLHSIITA-SDGAMVARGDLGA 352 (387)
Q Consensus 283 ~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~II-AKIEt~~gv--------~NL~eIl~~-sDGImIaRGDLg~ 352 (387)
+.+.+.|+|++.+| +.++..+|+.+ +.+..++ .=|- ++|- .+..+.+++ +|.+++||+=+..
T Consensus 169 ~~a~~aG~~GvV~s----a~e~~~iR~~~---g~~fl~VtPGIr-~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a 240 (255)
T 3ldv_A 169 TLTKNAGLDGVVCS----AQEASLLKQHL---GREFKLVTPGIR-PAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQA 240 (255)
T ss_dssp HHHHHTTCSEEECC----HHHHHHHHHHH---CTTSEEEEECCC-CTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTC
T ss_pred HHHHHcCCCEEEEC----HHHHHHHHHhc---CCCcEEEeCCcc-cCcCCccceeccCCHHHHHHcCCCEEEECHHHhCC
Confidence 34567899998766 78888888766 4555444 4453 2332 357777766 9999999987776
Q ss_pred cCCCCcH
Q 016564 353 ELPIEEV 359 (387)
Q Consensus 353 elg~e~v 359 (387)
+=|.+.+
T Consensus 241 ~dp~~a~ 247 (255)
T 3ldv_A 241 AHPEVVL 247 (255)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 5443333
No 280
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=24.72 E-value=1.8e+02 Score=27.56 Aligned_cols=66 Identities=14% Similarity=0.093 Sum_probs=40.5
Q ss_pred HHHHhhHhcCCCEEEEcCC---------C---CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh--cCeEEE
Q 016564 280 DDIKFGVDNKVDFYAVSFV---------K---DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--SDGAMV 345 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV---------~---sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--sDGImI 345 (387)
+.++...+.|+|+|.++-- . +.+-+..+++.+ ++.|++ .......++.+++++. +|+|++
T Consensus 233 ~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~-~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 233 GFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA-----DMATGA-VGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp HHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-----CCEEEE-CSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC-----CCCEEE-ECCCCCHHHHHHHHHcCCceEEee
Confidence 3445556789999998631 1 123344444443 456665 3333344566777775 899999
Q ss_pred cCCccc
Q 016564 346 ARGDLG 351 (387)
Q Consensus 346 aRGDLg 351 (387)
||+=|+
T Consensus 307 GR~~i~ 312 (338)
T 1z41_A 307 GRELLR 312 (338)
T ss_dssp CHHHHH
T ss_pred cHHHHh
Confidence 998655
No 281
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=24.71 E-value=1.1e+02 Score=26.04 Aligned_cols=41 Identities=29% Similarity=0.404 Sum_probs=29.9
Q ss_pred HHHhhHhcCCCEEEEcCCC--CHHHHHHHHHHHHhcCC-CceEE
Q 016564 281 DIKFGVDNKVDFYAVSFVK--DAQVVHELKNYLKSCGA-DIHVI 321 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~--sa~dV~~l~~~L~~~g~-~i~II 321 (387)
.++.+.+.++|.|++|... +.+.+.++.+.|++.+. +++|+
T Consensus 61 lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~ 104 (161)
T 2yxb_A 61 VAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVV 104 (161)
T ss_dssp HHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEE
T ss_pred HHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEE
Confidence 4567788999999999854 45667777777777763 56655
No 282
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=24.55 E-value=78 Score=29.57 Aligned_cols=23 Identities=22% Similarity=0.224 Sum_probs=19.9
Q ss_pred CCCHHHHHHHHHhCCceeEeecC
Q 016564 120 TNTREMIWKLAEAGMNVARLNMS 142 (387)
Q Consensus 120 s~~~e~i~~Li~aGm~v~RiN~S 142 (387)
....+.++.|.+.|+|++||-++
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~ 58 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMC 58 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCC
Confidence 34688999999999999999764
No 283
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=24.40 E-value=56 Score=26.80 Aligned_cols=25 Identities=24% Similarity=0.533 Sum_probs=18.5
Q ss_pred cccccCcCCEEEEeCCeEEEEEEEE
Q 016564 217 FVNDVEVGDMLLVDGGMMSLLVKSK 241 (387)
Q Consensus 217 l~~~v~~Gd~IliDDG~I~l~V~~v 241 (387)
-.+.+++||.|.+.+..+..+|+.+
T Consensus 30 k~~~ikvGD~I~f~~~~l~~~V~~v 54 (109)
T 2z0t_A 30 KRRQIKPGDIIIFEGGKLKVKVKGI 54 (109)
T ss_dssp TGGGCCTTCEEEEGGGTEEEEEEEE
T ss_pred hhhcCCCCCEEEECCCEEEEEEEEE
Confidence 3567899999999544677777654
No 284
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=24.39 E-value=2.2e+02 Score=27.27 Aligned_cols=69 Identities=23% Similarity=0.154 Sum_probs=40.8
Q ss_pred CcccH-HHHHhhHhcCCCEEEEcCC---------C---CHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhh
Q 016564 275 TEKDW-DDIKFGVDNKVDFYAVSFV---------K---DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA 339 (387)
Q Consensus 275 Te~D~-~dI~~a~~~gvD~I~lSfV---------~---sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~ 339 (387)
+..|. +.++...+.|+|+|-++-- . ..+-+..+++.+ ++.||+ -|-|+ +..+++++.
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-----~iPVi~~GgI~s~---e~a~~~L~~ 298 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-----DIPTGAVGLITSG---WQAEEILQN 298 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-----TCCEEEESSCCCH---HHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-----CCcEEeeCCCCCH---HHHHHHHHC
Confidence 44453 3445566789999999731 1 122333444432 355655 35554 345566665
Q ss_pred --cCeEEEcCCccc
Q 016564 340 --SDGAMVARGDLG 351 (387)
Q Consensus 340 --sDGImIaRGDLg 351 (387)
+|+|++||+=|+
T Consensus 299 G~aD~V~iGR~~la 312 (340)
T 3gr7_A 299 GRADLVFLGRELLR 312 (340)
T ss_dssp TSCSEEEECHHHHH
T ss_pred CCeeEEEecHHHHh
Confidence 899999998654
No 285
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=24.31 E-value=1.6e+02 Score=26.92 Aligned_cols=75 Identities=19% Similarity=0.172 Sum_probs=44.5
Q ss_pred ccCcCCEEEEeCC---eEEEEEEEEeCCeEEEEEEECcEecCCc--ceeeCCCCCCCCCCCcccHHHHHhhHhcCCCEEE
Q 016564 220 DVEVGDMLLVDGG---MMSLLVKSKTEDSVKCEVVDGGELKSRR--HLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYA 294 (387)
Q Consensus 220 ~v~~Gd~IliDDG---~I~l~V~~v~~d~v~c~V~~gG~L~s~K--gVn~p~~~l~lp~LTe~D~~dI~~a~~~gvD~I~ 294 (387)
-+++||.|.+-|| ....+|.+++++.+.+++..--...... .+.+ ..-+|. .++-...++.+.+.|++-|.
T Consensus 40 Rl~~Gd~v~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~i~L---~~al~K-~~r~e~ilqkatELGV~~I~ 115 (234)
T 1z85_A 40 RLKEGDVIEATDGNGFSYTCILKSLKKKTAAAKIVKVEEKEKEPTEKLSV---VVPIGR-WERTRFLIEKCVELGVDEIF 115 (234)
T ss_dssp TCCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSCEEE---EEECCC-HHHHHHHHHHHHHTTCSEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCceEEE---EEeccc-hHHHHHHHHHHHHhCCCEEE
Confidence 5689999987654 4566788888898888876532211111 1111 011221 23334567889999999765
Q ss_pred EcCC
Q 016564 295 VSFV 298 (387)
Q Consensus 295 lSfV 298 (387)
.=+.
T Consensus 116 p~~s 119 (234)
T 1z85_A 116 FHKF 119 (234)
T ss_dssp EECC
T ss_pred EEEE
Confidence 4443
No 286
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=24.27 E-value=60 Score=31.37 Aligned_cols=50 Identities=22% Similarity=0.353 Sum_probs=31.0
Q ss_pred HHHHHHHHhCCceeEeecCCCC---HHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 124 EMIWKLAEAGMNVARLNMSHGD---HASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 124 e~i~~Li~aGm~v~RiN~SHg~---~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
+.|+.|.+.|+|++|+-++-+. ......+-+.|.. ..+ +-+.+++|+-..
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~-a~~---~GiyVIlDlH~~ 110 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIEL-AEQ---NKMVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHH-HHT---TTCEEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHH-HHH---CCCEEEEEeccC
Confidence 5889999999999999876431 1222222222332 232 337888999865
No 287
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=24.19 E-value=77 Score=30.72 Aligned_cols=48 Identities=15% Similarity=0.246 Sum_probs=36.8
Q ss_pred EEEecCCCCCCHHHHHHHHHh--CCceeEeecCCCCHHHHHHHHHHHHHH
Q 016564 112 IVCTIGPSTNTREMIWKLAEA--GMNVARLNMSHGDHASHQKVIDLVKEY 159 (387)
Q Consensus 112 II~TIGPss~~~e~i~~Li~a--Gm~v~RiN~SHg~~e~~~~~I~~iR~~ 159 (387)
+.+.+|......+.+..++++ |++++=+.++||++..+.+.|+.+|+.
T Consensus 109 v~~~~g~~~~~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~ 158 (351)
T 2c6q_A 109 LAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKR 158 (351)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHH
T ss_pred eEeecCCChHHHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHh
Confidence 555566544457888999998 999999999999877777777777753
No 288
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=24.08 E-value=83 Score=30.29 Aligned_cols=69 Identities=14% Similarity=0.273 Sum_probs=50.2
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChh--hhhcHHHHHhh-cCeEEEcC-------
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESAD--SIPNLHSIITA-SDGAMVAR------- 347 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~--gv~NL~eIl~~-sDGImIaR------- 347 (387)
..+.+..+++.|+|.|.+-.. ++++++++.+.+. +++ +||--- -++|+.++++. +|.|-+|.
T Consensus 216 tl~e~~eAl~aGaDiImLDn~-s~~~l~~av~~~~---~~v----~leaSGGIt~~~i~~~A~tGVD~IsvGalthsa~~ 287 (300)
T 3l0g_A 216 NISQVEESLSNNVDMILLDNM-SISEIKKAVDIVN---GKS----VLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQN 287 (300)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TSS----EEEEESSCCTTTHHHHHTTTCSEEECGGGTSSCCC
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHhhc---Cce----EEEEECCCCHHHHHHHHHcCCCEEEeCccccCCCc
Confidence 356778889999999999987 6788888887774 343 344332 35688888887 89888864
Q ss_pred CcccccC
Q 016564 348 GDLGAEL 354 (387)
Q Consensus 348 GDLg~el 354 (387)
-||++++
T Consensus 288 lDisl~i 294 (300)
T 3l0g_A 288 KDIGLDI 294 (300)
T ss_dssp CCEEEEE
T ss_pred ceeEEEe
Confidence 5666655
No 289
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=24.06 E-value=1.5e+02 Score=26.18 Aligned_cols=62 Identities=24% Similarity=0.280 Sum_probs=0.0
Q ss_pred HHHHHhhHhcCCCEEEEc-----CCCC----HHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEE
Q 016564 279 WDDIKFGVDNKVDFYAVS-----FVKD----AQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lS-----fV~s----a~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImI 345 (387)
.+.++.+.+.|+|+|-+- |+.+ .+.++++++.. +..+.+..++..++ +.++..+++ +|+|.+
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~v 97 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---DLPLDVHLMIVEPD--QRVPDFIKAGADIVSV 97 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---CSCEEEEEESSSHH--HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEE
No 290
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=23.77 E-value=1.5e+02 Score=27.75 Aligned_cols=100 Identities=10% Similarity=0.028 Sum_probs=57.4
Q ss_pred CCcccHHH-HHhhHhcCCCEEEEcCCCCH------HHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEE
Q 016564 274 ITEKDWDD-IKFGVDNKVDFYAVSFVKDA------QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (387)
Q Consensus 274 LTe~D~~d-I~~a~~~gvD~I~lSfV~sa------~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImI 345 (387)
++..++.. ++.+.+.|++.|-+.|-.++ .|..++...+.+ ..++.+.+.+.+.+. ++.-+++ .|.|+|
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l~~~~~~---i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ-RPGVTYAALAPNLKG---FEAALESGVKEVAV 102 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC-CTTSEEEEECCSHHH---HHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh-cCCCEEEEEeCCHHH---HHHHHhCCcCEEEE
Confidence 45566544 45566789999888642222 233333333322 245666666644333 3333333 677765
Q ss_pred --cCCcc----cccCCCCcHHHHHHHHHHHHHHCCCCc
Q 016564 346 --ARGDL----GAELPIEEVPLLQVVFISDIRAMPRMS 377 (387)
Q Consensus 346 --aRGDL----g~elg~e~v~~~Qk~II~~c~aaGKp~ 377 (387)
+-.|+ -..++.++.....+++++.|+++|+.+
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V 140 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRV 140 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 33342 122455667777789999999999986
No 291
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=23.69 E-value=1.4e+02 Score=29.04 Aligned_cols=64 Identities=16% Similarity=0.170 Sum_probs=44.4
Q ss_pred CceEEEecCCCCC-CHH----HHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 109 KTKIVCTIGPSTN-TRE----MIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 109 ~TKII~TIGPss~-~~e----~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
+....+|+|-... +++ ..+++.++|.+.+.|.+.|++.+.-.+.++.||++. + ..+.|++|..|
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g-~d~~l~vDan~ 216 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---G-DAVPLMVDANQ 216 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---C-TTSCEEEECTT
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---C-CCCEEEEECCC
Confidence 4455666544312 443 556778899999999999988888888888888763 2 23567888643
No 292
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=23.45 E-value=88 Score=28.29 Aligned_cols=79 Identities=9% Similarity=0.033 Sum_probs=49.3
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEE-EecCChhhhhcHHHHHhh-cCeEEEcCCcccccCCC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVI-VKIESADSIPNLHSIITA-SDGAMVARGDLGAELPI 356 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~II-AKIEt~~gv~NL~eIl~~-sDGImIaRGDLg~elg~ 356 (387)
....+.+.+.|+|++.+|- ..++++..+|+.+ +. ..++ .=|=. ++ .++.+.+++ +|.+++||+=+..+=|.
T Consensus 118 ~~~a~~a~~~G~~GvV~sa-t~~~e~~~ir~~~---~~-f~~v~pGI~~-~g-~~~~~a~~~Gad~iVvGr~I~~a~dp~ 190 (215)
T 3ve9_A 118 PYLREVARRVNPKGFVAPA-TRPSMISRVKGDF---PD-KLVISPGVGT-QG-AKPGIALCHGADYEIVGRSVYQSADPV 190 (215)
T ss_dssp HHHHHHHHHHCCSEEECCT-TSHHHHHHHHHHC---TT-SEEEECCTTS-TT-CCTTHHHHTTCSEEEECHHHHTSSSHH
T ss_pred HHHHHHHHHcCCCceeeCC-CCHHHHHHHHHhC---CC-cEEEcCCCCc-Cc-CCHHHHHHcCCCEEEeCHHHcCCCCHH
Confidence 3445667789999988763 3477888888754 23 3333 33421 11 145566655 89999999988877665
Q ss_pred CcHHHHHH
Q 016564 357 EEVPLLQV 364 (387)
Q Consensus 357 e~v~~~Qk 364 (387)
+....+++
T Consensus 191 ~a~~~i~~ 198 (215)
T 3ve9_A 191 RKLEEIVR 198 (215)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 293
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=23.35 E-value=1.3e+02 Score=29.27 Aligned_cols=62 Identities=10% Similarity=0.089 Sum_probs=40.3
Q ss_pred HHHhhHhcCCCEEEEcCCC---C----HHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhh--cCeEEEcCCc
Q 016564 281 DIKFGVDNKVDFYAVSFVK---D----AQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA--SDGAMVARGD 349 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~---s----a~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~--sDGImIaRGD 349 (387)
.++.+.+.|+|+|.++--. . .+-+..+++.+ ++.||+ -| | .++.+++++. +|+|++||+=
T Consensus 255 ~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~-----~iPvi~~Ggi-~---~~~a~~~l~~g~aD~V~igR~~ 325 (365)
T 2gou_A 255 AAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAY-----QGVLIYAGRY-N---AEKAEQAINDGLADMIGFGRPF 325 (365)
T ss_dssp HHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-----CSEEEEESSC-C---HHHHHHHHHTTSCSEEECCHHH
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHC-----CCcEEEeCCC-C---HHHHHHHHHCCCcceehhcHHH
Confidence 3456667899999998531 1 22244444433 356665 35 4 4677888876 8999999987
Q ss_pred cc
Q 016564 350 LG 351 (387)
Q Consensus 350 Lg 351 (387)
|+
T Consensus 326 i~ 327 (365)
T 2gou_A 326 IA 327 (365)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 294
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=23.20 E-value=55 Score=28.98 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=61.1
Q ss_pred HHHHHhhHhcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCCceEEE---ecCC------hhhhhcHHHHHhh-----cCeE
Q 016564 279 WDDIKFGVDNKVDFYAVSFVK-DAQVVHELKNYLKSCGADIHVIV---KIES------ADSIPNLHSIITA-----SDGA 343 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~-sa~dV~~l~~~L~~~g~~i~IIA---KIEt------~~gv~NL~eIl~~-----sDGI 343 (387)
.+.++.+.+.|.|+|=+..-. +..++.++++.+++.|-.+..+. .+-+ .++++.+...++. ++.|
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v 100 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCL 100 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCE
T ss_pred HHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 346788889999999886521 35678888999988775433222 2322 2345566666554 4567
Q ss_pred EEcCCcccc-cCC----CCcHHHHHHHHHHHHHHCCCCcc
Q 016564 344 MVARGDLGA-ELP----IEEVPLLQVVFISDIRAMPRMSS 378 (387)
Q Consensus 344 mIaRGDLg~-elg----~e~v~~~Qk~II~~c~aaGKp~g 378 (387)
.+..|...- ... ++.+...-+++...|+++|..++
T Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~ 140 (275)
T 3qc0_A 101 VLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLA 140 (275)
T ss_dssp EEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 666654321 111 12344455788888888888764
No 295
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=23.15 E-value=2.1e+02 Score=26.86 Aligned_cols=67 Identities=9% Similarity=0.107 Sum_probs=40.9
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcC-CCceEEEecCChhhhhcHHHHHhh-cCeEEE
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCG-ADIHVIVKIESADSIPNLHSIITA-SDGAMV 345 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g-~~i~IIAKIEt~~gv~NL~eIl~~-sDGImI 345 (387)
..+.++.+...|+|+|++-.=..+.+-..+.+++.... ....++..|=..+- ..|..++.. +|+||+
T Consensus 49 ~p~~~e~a~~~GaD~v~lDlEh~~~~~~~~~~~l~a~~~~~~~~~VRv~~~d~-~di~~~ld~ga~~Iml 117 (287)
T 2v5j_A 49 SSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDP-VQIKQLLDVGTQTLLV 117 (287)
T ss_dssp CHHHHHHHHTSCCSEEEEESSSSSCCHHHHHHHHHHHTTSSSEEEEECSSSCH-HHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHhCCCCEEEEeCCCccchHHHHHHHHHHHHhcCCCEEEEECCCCH-HHHHHHHhCCCCEEEe
Confidence 34566777788999998887666666666666665322 23456666643322 245555554 567776
No 296
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=23.14 E-value=1.1e+02 Score=28.40 Aligned_cols=21 Identities=14% Similarity=0.181 Sum_probs=17.4
Q ss_pred HHHHHHHHHhCCceeEeecCC
Q 016564 123 REMIWKLAEAGMNVARLNMSH 143 (387)
Q Consensus 123 ~e~i~~Li~aGm~v~RiN~SH 143 (387)
.+.++.|.++|+|++|+.+.+
T Consensus 48 ~~d~~~~k~~G~N~vR~~~~~ 68 (353)
T 2c0h_A 48 ESTLSDMQSHGGNSVRVWLHI 68 (353)
T ss_dssp HHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEceec
Confidence 458888999999999997543
No 297
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=23.13 E-value=2.2e+02 Score=28.30 Aligned_cols=65 Identities=17% Similarity=0.212 Sum_probs=0.0
Q ss_pred cHHHHHhhHhcCCCEEEEcC---------------CCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh---
Q 016564 278 DWDDIKFGVDNKVDFYAVSF---------------VKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA--- 339 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSf---------------V~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~--- 339 (387)
+.++...+.+.|+|+|.++. .-..+.+.++.....+.+ +.|||- -|+.+..+++++
T Consensus 284 t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~--ipvia~----GGi~~~~di~kal~~ 357 (491)
T 1zfj_A 284 TAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYG--KTIIAD----GGIKYSGDIVKALAA 357 (491)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTT--CEEEEE----SCCCSHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcC--CCEEee----CCCCCHHHHHHHHHc
Q ss_pred -cCeEEEcCC
Q 016564 340 -SDGAMVARG 348 (387)
Q Consensus 340 -sDGImIaRG 348 (387)
+|++++|+.
T Consensus 358 GA~~v~vG~~ 367 (491)
T 1zfj_A 358 GGNAVMLGSM 367 (491)
T ss_dssp TCSEEEESTT
T ss_pred CCcceeeCHH
No 298
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=23.11 E-value=2.3e+02 Score=27.12 Aligned_cols=62 Identities=6% Similarity=0.116 Sum_probs=44.0
Q ss_pred cHHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChh--hhhcHHHHHhh-cCeEEEcC
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESAD--SIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~--gv~NL~eIl~~-sDGImIaR 347 (387)
..+.++.+++.|+|+|.+-.. +++++++..+.+ ..++. ||--- -.+|+.++++. +|+|-+|.
T Consensus 218 tlde~~eAl~aGaD~I~LDn~-~~~~l~~av~~i---~~~v~----ieaSGGI~~~~i~~~a~tGVD~isvG~ 282 (298)
T 3gnn_A 218 TLDQLRTALAHGARSVLLDNF-TLDMMRDAVRVT---EGRAV----LEVSGGVNFDTVRAIAETGVDRISIGA 282 (298)
T ss_dssp SHHHHHHHHHTTCEEEEEESC-CHHHHHHHHHHH---TTSEE----EEEESSCSTTTHHHHHHTTCSEEECGG
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHh---CCCCe----EEEEcCCCHHHHHHHHHcCCCEEEECC
Confidence 345677888999999999886 677787777666 34443 33332 34588888887 89988865
No 299
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=23.01 E-value=92 Score=29.43 Aligned_cols=53 Identities=19% Similarity=0.201 Sum_probs=32.3
Q ss_pred CCCHHHHHHHH-HhCCceeEeecCCC------CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 120 TNTREMIWKLA-EAGMNVARLNMSHG------DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 120 s~~~e~i~~Li-~aGm~v~RiN~SHg------~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
..+.+.++.|. +.|+|++|+-+.+. +++.+..+-+.|..+ .+.+ +.+++|+-+
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a-~~~G---i~VilD~H~ 127 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAA-KELG---IYVIIDWHI 127 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHH-HHHT---CEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHH-HHCC---CEEEEEecc
Confidence 34577889986 68999999977643 223333222333333 3333 678889865
No 300
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=23.00 E-value=70 Score=32.07 Aligned_cols=52 Identities=21% Similarity=0.321 Sum_probs=32.1
Q ss_pred CHHHHHHHHHhCCceeEeecCCC---CHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 122 TREMIWKLAEAGMNVARLNMSHG---DHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 122 ~~e~i~~Li~aGm~v~RiN~SHg---~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
..+.|+.|.+.|+|++||-++.+ .......+-+.|..+ .+. -+.+++|+-+.
T Consensus 41 ~~~di~~ik~~G~N~VRipv~~g~~~~~~~l~~ld~vv~~a-~~~---Gl~VIlDlH~~ 95 (464)
T 1wky_A 41 ATTAIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLA-EDN---NLVAVLEVHDA 95 (464)
T ss_dssp HHHHHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHH-HHT---TCEEEEEECTT
T ss_pred hHHHHHHHHHCCCCEEEEEcCCCCccCHHHHHHHHHHHHHH-HHC---CCEEEEEecCC
Confidence 35789999999999999988633 112222222223333 323 37888998753
No 301
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=22.81 E-value=61 Score=31.71 Aligned_cols=64 Identities=8% Similarity=-0.034 Sum_probs=39.1
Q ss_pred HHHHhhHhcCCCEEEEcCCC---------CHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhh--cCeEEEc
Q 016564 280 DDIKFGVDNKVDFYAVSFVK---------DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITA--SDGAMVA 346 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~---------sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~--sDGImIa 346 (387)
+.++.+.+.|+|+|-++--. ..+.+..+++.+ ++.|++ .| | .+..+++++. +|+|++|
T Consensus 260 ~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~-----~iPvi~~G~i-~---~~~a~~~l~~g~aD~V~~g 330 (376)
T 1icp_A 260 YMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY-----KGTFIVAGGY-D---REDGNRALIEDRADLVAYG 330 (376)
T ss_dssp HHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC-----CSCEEEESSC-C---HHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc-----CCCEEEeCCC-C---HHHHHHHHHCCCCcEEeec
Confidence 34455567899999986310 112233444332 345655 35 4 4567777775 8999999
Q ss_pred CCcccc
Q 016564 347 RGDLGA 352 (387)
Q Consensus 347 RGDLg~ 352 (387)
|+=|+-
T Consensus 331 R~~l~~ 336 (376)
T 1icp_A 331 RLFISN 336 (376)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 986653
No 302
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=22.80 E-value=1.5e+02 Score=29.10 Aligned_cols=64 Identities=20% Similarity=0.157 Sum_probs=43.8
Q ss_pred cccHHHHHhhHhc-CCCEEEEcC-------CCCHHHHHHHHHHHHhcCCCceEEEec-----------CChhhhhcHHHH
Q 016564 276 EKDWDDIKFGVDN-KVDFYAVSF-------VKDAQVVHELKNYLKSCGADIHVIVKI-----------ESADSIPNLHSI 336 (387)
Q Consensus 276 e~D~~dI~~a~~~-gvD~I~lSf-------V~sa~dV~~l~~~L~~~g~~i~IIAKI-----------Et~~gv~NL~eI 336 (387)
+.|..-|+.+.+. |+++|-++- +-+.+++.++++.+.+.|-.+..+.-+ +..+.++++.+.
T Consensus 30 ~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~ 109 (386)
T 3bdk_A 30 KKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTS 109 (386)
T ss_dssp TTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHHH
Confidence 3455567788889 999998762 446689999999999877655444211 124466777777
Q ss_pred Hhh
Q 016564 337 ITA 339 (387)
Q Consensus 337 l~~ 339 (387)
+..
T Consensus 110 i~~ 112 (386)
T 3bdk_A 110 IRN 112 (386)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 303
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=22.66 E-value=90 Score=23.95 Aligned_cols=41 Identities=20% Similarity=0.199 Sum_probs=22.7
Q ss_pred CCCeEecCCCEEEEEecCCCCCccEEEeccCCcccccCcCC
Q 016564 185 PQPITLTSGQEFTFTIQRGVGSAECVSVNYDDFVNDVEVGD 225 (387)
Q Consensus 185 ~~~i~Lk~G~~v~lt~~~~~g~~~~i~v~~~~l~~~v~~Gd 225 (387)
+..+.++.|++|+|...........+.+....+-..+.+|.
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~~~~~pg~ 67 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKSEHTFTIKKLGIDVVVESGK 67 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEEEEECTTC
T ss_pred CCEEEECCCCEEEEEEEcCCCceEEEEEecCCcceeecCCc
Confidence 35689999999999753221223344444333333444443
No 304
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=22.57 E-value=1.7e+02 Score=26.88 Aligned_cols=46 Identities=20% Similarity=0.238 Sum_probs=29.9
Q ss_pred CceEEEec-CCC-CCCHHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHH
Q 016564 109 KTKIVCTI-GPS-TNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVK 157 (387)
Q Consensus 109 ~TKII~TI-GPs-s~~~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR 157 (387)
+.+||.=+ +.. ..-.++.+.|++.|++++++-+..-+ ..+.|+.+|
T Consensus 33 ~~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~---a~e~I~~l~ 80 (232)
T 4e38_A 33 ALKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDA---AVEAIRLLR 80 (232)
T ss_dssp HHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTT---HHHHHHHHH
T ss_pred hCCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCC---HHHHHHHHH
Confidence 44666555 222 34467889999999999999887532 234555554
No 305
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=22.55 E-value=3.5e+02 Score=24.31 Aligned_cols=85 Identities=4% Similarity=-0.107 Sum_probs=50.0
Q ss_pred HHHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEEcCCcccccCCCC
Q 016564 279 WDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGDLGAELPIE 357 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImIaRGDLg~elg~e 357 (387)
.+.++.+++.|++.|=+.+- ++...+.++.+..+. .++.+-+-. .---+.++.-+++ +|++..+--|
T Consensus 41 ~~~~~al~~gGv~~iel~~k-~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d-------- 108 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTLR-SQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT-------- 108 (225)
T ss_dssp HHHHHHHHHTTCCEEEEESS-STHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC--------
T ss_pred HHHHHHHHHCCCCEEEEecC-CccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC--------
Confidence 45667788889999999864 455555555443333 344444432 2222444444444 7888755333
Q ss_pred cHHHHHHHHHHHHHHCCCCccccccc
Q 016564 358 EVPLLQVVFISDIRAMPRMSSSIKAF 383 (387)
Q Consensus 358 ~v~~~Qk~II~~c~aaGKp~g~id~~ 383 (387)
..+++.|+.+|.+. |-|+
T Consensus 109 ------~~v~~~~~~~g~~~--i~G~ 126 (225)
T 1mxs_A 109 ------EDILEAGVDSEIPL--LPGI 126 (225)
T ss_dssp ------HHHHHHHHHCSSCE--ECEE
T ss_pred ------HHHHHHHHHhCCCE--EEee
Confidence 36778888888776 4443
No 306
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=22.52 E-value=1.8e+02 Score=27.03 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=28.6
Q ss_pred EecCCCCCCHHHHHHHHHhC--CceeEeecCCCCHHHH
Q 016564 114 CTIGPSTNTREMIWKLAEAG--MNVARLNMSHGDHASH 149 (387)
Q Consensus 114 ~TIGPss~~~e~i~~Li~aG--m~v~RiN~SHg~~e~~ 149 (387)
.|.-|..-+.+.++.|.++| ++-+-|.+-+++.+..
T Consensus 92 ~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl 129 (304)
T 2qgq_A 92 MYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKIL 129 (304)
T ss_dssp CCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHH
T ss_pred eeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHHH
Confidence 45667777899999999999 7777788888876643
No 307
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=22.41 E-value=1.4e+02 Score=27.82 Aligned_cols=65 Identities=20% Similarity=0.148 Sum_probs=42.3
Q ss_pred HhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEE-EecCChhh--------hhcHHHHHhh-cCeEEEcCCcccc
Q 016564 283 KFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVI-VKIESADS--------IPNLHSIITA-SDGAMVARGDLGA 352 (387)
Q Consensus 283 ~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~II-AKIEt~~g--------v~NL~eIl~~-sDGImIaRGDLg~ 352 (387)
+.+.+.|+|++.+| ++++..+|+.+ +.+..++ .=|- ++| +.++.+.+++ +|.+++||+=...
T Consensus 151 ~~a~~~G~dGvV~s----~~e~~~ir~~~---~~~f~~vtPGIr-~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a 222 (259)
T 3tfx_A 151 KMAKHSGADGVICS----PLEVKKLHENI---GDDFLYVTPGIR-PAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLA 222 (259)
T ss_dssp HHHHHTTCCEEECC----GGGHHHHHHHH---CSSSEEEECCCC-CC-----------CHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHhCCCEEEEC----HHHHHHHHhhc---CCccEEEcCCcC-CCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 44567899998886 78888888866 4444332 3332 122 3467777777 9999999986665
Q ss_pred cCC
Q 016564 353 ELP 355 (387)
Q Consensus 353 elg 355 (387)
+=+
T Consensus 223 ~dp 225 (259)
T 3tfx_A 223 SDP 225 (259)
T ss_dssp SSH
T ss_pred CCH
Confidence 533
No 308
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=22.31 E-value=3.8e+02 Score=23.11 Aligned_cols=67 Identities=9% Similarity=0.199 Sum_probs=38.6
Q ss_pred cHHHHHhhHhcCCCEEEEcCCC--CH-HHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEEcC
Q 016564 278 DWDDIKFGVDNKVDFYAVSFVK--DA-QVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVAR 347 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSfV~--sa-~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImIaR 347 (387)
+.+.+..+.+.|+|+|.+.... ++ +.+.++.+.+.+...+..++..+-|.+-.. ...+. +|.|+++.
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~---~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAK---NAARLGFDYIGTTL 147 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHH---HHHHTTCSEEECTT
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHH---HHHHcCCCEEEeCC
Confidence 3556778889999999876543 22 233444444444323556777666644322 22222 78888754
No 309
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=22.02 E-value=1.5e+02 Score=27.27 Aligned_cols=58 Identities=16% Similarity=0.245 Sum_probs=39.7
Q ss_pred EecCCCEEEEEecC--CCC---CccEEEeccCCccc---ccCcCCEEEEeCCeEEEEEEEEeCCeEEE
Q 016564 189 TLTSGQEFTFTIQR--GVG---SAECVSVNYDDFVN---DVEVGDMLLVDGGMMSLLVKSKTEDSVKC 248 (387)
Q Consensus 189 ~Lk~G~~v~lt~~~--~~g---~~~~i~v~~~~l~~---~v~~Gd~IliDDG~I~l~V~~v~~d~v~c 248 (387)
-++.|++.+|++.. .+| ......++-..|.. .+++|+.+.+++ . ..+|.+++++.|..
T Consensus 63 Gm~vGek~~v~Ippe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~-~-~g~V~~v~~~~V~v 128 (231)
T 3prb_A 63 EMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (231)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEeCcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecC-C-CEEEEEEcCCEEEE
Confidence 36789999998864 333 33455666666654 267799999864 4 46788888886643
No 310
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=21.95 E-value=3.2e+02 Score=26.42 Aligned_cols=61 Identities=11% Similarity=0.139 Sum_probs=42.6
Q ss_pred ceEEEec-CCCCCCH----HHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 110 TKIVCTI-GPSTNTR----EMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 110 TKII~TI-GPss~~~----e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
....+|+ |. ..++ +..+++.+.|-+.+.|++.+ +.+.-.+.++.+|++. + ..+.+++|..|
T Consensus 139 v~~y~~~~~~-~~~~e~~~~~a~~~~~~G~~~iKiKvG~-~~~~d~~~v~avR~a~---g-~d~~l~vDan~ 204 (389)
T 3ozy_A 139 VRAYASSIYW-DLTPDQAADELAGWVEQGFTAAKLKVGR-APRKDAANLRAMRQRV---G-ADVEILVDANQ 204 (389)
T ss_dssp EEEEEEEECS-SCCHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHH---C-TTSEEEEECTT
T ss_pred eeeEEecCCC-CCCHHHHHHHHHHHHHCCCCEEeeccCC-CHHHHHHHHHHHHHHc---C-CCceEEEECCC
Confidence 6677887 52 2234 34567778899999999986 5777777888888753 2 23678888754
No 311
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=21.92 E-value=2.3e+02 Score=27.07 Aligned_cols=66 Identities=11% Similarity=-0.036 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCcccccc
Q 016564 303 VVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKA 382 (387)
Q Consensus 303 dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~ 382 (387)
-+..+.+.|.+.|..+.|-+--+.... +.++++.-.|.|+.+-.+ ...+..|-..|+++++|. |++
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~--i~~ 156 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKF--FTG 156 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEE--EEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCE--EEE
Confidence 345666778888888887776555443 557788888888776322 456778999999999997 654
No 312
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=21.80 E-value=1.4e+02 Score=29.11 Aligned_cols=63 Identities=11% Similarity=0.072 Sum_probs=40.5
Q ss_pred HHHHhhHhcCCCEEEEcCCCC-HHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh--cCeEEEcCCccc
Q 016564 280 DDIKFGVDNKVDFYAVSFVKD-AQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA--SDGAMVARGDLG 351 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~s-a~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~--sDGImIaRGDLg 351 (387)
+.++...+.|+|+|-++--.+ .+-+..+++.+ ++.||+- | | .+..+++++. +|+|++||+=|+
T Consensus 254 ~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~-----~iPvi~~Ggi-t---~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 254 HVARELGRRRIAFLFARESFGGDAIGQQLKAAF-----GGPFIVNENF-T---LDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCCSTTCCHHHHHHHH-----CSCEEEESSC-C---HHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHc-----CCCEEEeCCC-C---HHHHHHHHHcCCccEEEECHHhHh
Confidence 344555678999999975431 23355566554 2455553 4 4 4567777775 899999998554
No 313
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=21.67 E-value=1.3e+02 Score=22.92 Aligned_cols=29 Identities=10% Similarity=0.288 Sum_probs=23.1
Q ss_pred cCcCCEEEEeCCeEEEEEEEEeCCeEEEEE
Q 016564 221 VEVGDMLLVDGGMMSLLVKSKTEDSVKCEV 250 (387)
Q Consensus 221 v~~Gd~IliDDG~I~l~V~~v~~d~v~c~V 250 (387)
-++|..|.|.| .|..+|.++.++.|..=+
T Consensus 6 Rk~GEsI~IGd-~I~ItVl~v~g~~VrLGI 34 (70)
T 2jpp_A 6 RKVGESINIGD-DITITILGVSGQQVRIGI 34 (70)
T ss_dssp EETTCEEEETT-TEEEEEEEEETTEEEEEE
T ss_pred ccCCCeEEECC-CEEEEEEEEeCCEEEEEE
Confidence 37889999976 589999999988876533
No 314
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=21.62 E-value=3e+02 Score=25.64 Aligned_cols=62 Identities=15% Similarity=0.050 Sum_probs=41.0
Q ss_pred HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEE
Q 016564 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAM 344 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGIm 344 (387)
+-++.+.+.|+|++++|=.- .++..++++++++.|-+.-.++--.| ..+.+.+|.+.+.|++
T Consensus 116 ~f~~~~~~aGvdGvIipDlp-~ee~~~~~~~~~~~gl~~I~lvap~t--~~eri~~i~~~~~gfi 177 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADVP-TNESQPFVAAAEKFGIQPIFIAPPTA--SDETLRAVAQLGKGYT 177 (271)
T ss_dssp HHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEEEEECTTC--CHHHHHHHHHHCCSCE
T ss_pred HHHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHHHCCCeE
Confidence 34667788999999988663 35677777888776655322222223 2478888988887664
No 315
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=21.61 E-value=2.1e+02 Score=26.84 Aligned_cols=18 Identities=28% Similarity=0.213 Sum_probs=15.9
Q ss_pred HHHHHHHHHhCCceeEee
Q 016564 123 REMIWKLAEAGMNVARLN 140 (387)
Q Consensus 123 ~e~i~~Li~aGm~v~RiN 140 (387)
.+.|+.|.+.|+|++|+-
T Consensus 45 ~~dl~~~k~~G~N~vR~~ 62 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTW 62 (373)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHCCCCEEEEC
Confidence 568889999999999986
No 316
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=21.60 E-value=96 Score=28.62 Aligned_cols=63 Identities=16% Similarity=0.097 Sum_probs=39.6
Q ss_pred cHHHHHhhHhcCCCEEEEcC--------CCCHHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh-cCeEEEc
Q 016564 278 DWDDIKFGVDNKVDFYAVSF--------VKDAQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA-SDGAMVA 346 (387)
Q Consensus 278 D~~dI~~a~~~gvD~I~lSf--------V~sa~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~-sDGImIa 346 (387)
+.+.++.+.+.|+|||...- ..+.+.++.+++. .++.|++- |-|++ ++.+++++ +|||+||
T Consensus 136 ~~~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~-----~~iPviv~gGI~t~e---da~~~~~~GAdgViVG 207 (264)
T 1xm3_A 136 DVVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQ-----AKVPVIVDAGIGSPK---DAAYAMELGADGVLLN 207 (264)
T ss_dssp CHHHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHH-----CSSCBEEESCCCSHH---HHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhc-----CCCCEEEEeCCCCHH---HHHHHHHcCCCEEEEc
Confidence 44567888889999984311 1245555555542 25666664 55544 45565666 9999999
Q ss_pred CC
Q 016564 347 RG 348 (387)
Q Consensus 347 RG 348 (387)
.+
T Consensus 208 SA 209 (264)
T 1xm3_A 208 TA 209 (264)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 317
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=21.51 E-value=4.1e+02 Score=23.21 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=52.3
Q ss_pred HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEec-----C--ChhhhhcHHHHHhhc-CeEEEcCCccc
Q 016564 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKI-----E--SADSIPNLHSIITAS-DGAMVARGDLG 351 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKI-----E--t~~gv~NL~eIl~~s-DGImIaRGDLg 351 (387)
+.++.+.++|++.+++.- .+.++...+.++..+.. ++....=+ . +.+.++.|.+.+... +. .+|=|..|
T Consensus 23 ~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~-~~~iGEiG 99 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVPA-TEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAK-VVAVGEIG 99 (259)
T ss_dssp HHHHHHHHTTEEEEEEEC-CSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSS-EEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEec-CCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCC-EEEEEEec
Confidence 456677789999877653 34667777766554432 32222212 1 223445555555431 22 23446667
Q ss_pred ccCCCCc-HHHHH----HHHHHHHHHCCCCc
Q 016564 352 AELPIEE-VPLLQ----VVFISDIRAMPRMS 377 (387)
Q Consensus 352 ~elg~e~-v~~~Q----k~II~~c~aaGKp~ 377 (387)
.+..... -...| ...++.|.+.|+|+
T Consensus 100 ld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv 130 (259)
T 1zzm_A 100 LDLFGDDPQFERQQWLLDEQLKLAKRYDLPV 130 (259)
T ss_dssp EECCSSCCCHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHhCCcE
Confidence 6654321 13444 45677799999997
No 318
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=21.47 E-value=96 Score=28.37 Aligned_cols=12 Identities=8% Similarity=0.099 Sum_probs=10.4
Q ss_pred HHHHHHHHHCCC
Q 016564 364 VVFISDIRAMPR 375 (387)
Q Consensus 364 k~II~~c~aaGK 375 (387)
.++++.|+++|.
T Consensus 96 ~evi~~~~~~~v 107 (217)
T 3lab_A 96 PELIEKAKQVKL 107 (217)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC
Confidence 578899999988
No 319
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=21.44 E-value=97 Score=26.96 Aligned_cols=62 Identities=13% Similarity=0.214 Sum_probs=38.9
Q ss_pred HHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhhcCeEEE
Q 016564 281 DIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMV 345 (387)
Q Consensus 281 dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~sDGImI 345 (387)
.++.+.+.|+|+|.+.--.. ++...+.+.+.+.| ..++.-+-+....+.+.++...+|.|++
T Consensus 76 ~i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~ 137 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLI 137 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEE
T ss_pred HHHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEE
Confidence 35778889999999876554 45555556665544 4455556333334455555566887765
No 320
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=21.42 E-value=1.3e+02 Score=28.64 Aligned_cols=54 Identities=19% Similarity=0.186 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHhCCceeEeecCCCCH-----HHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Q 016564 121 NTREMIWKLAEAGMNVARLNMSHGDH-----ASHQKVIDLVKEYNAQSKDNVIAIMLDTKGP 177 (387)
Q Consensus 121 ~~~e~i~~Li~aGm~v~RiN~SHg~~-----e~~~~~I~~iR~~~~~~~~~~i~I~lDL~GP 177 (387)
...+.++.|-+.|+|++|+-+..... +...+.++.+=+...+. -+.+++|+-+.
T Consensus 86 ~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~---Gi~Vild~H~~ 144 (359)
T 4hty_A 86 FSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNEL---GIYTILDWHSI 144 (359)
T ss_dssp CSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHT---TCEEEEEECCE
T ss_pred cCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHC---CCEEEEEcCCC
Confidence 34778999999999999998664321 12222223222223323 37888998764
No 321
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=21.38 E-value=2.3e+02 Score=25.66 Aligned_cols=84 Identities=17% Similarity=0.265 Sum_probs=54.1
Q ss_pred HHHHhhHhcCCCEEEE-----cCCC----CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEEcCCc
Q 016564 280 DDIKFGVDNKVDFYAV-----SFVK----DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGD 349 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~l-----SfV~----sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImIaRGD 349 (387)
+.++.+ +.|+|++-+ .||- .+..++.++++. +..+-+-.||++++-+ ++..+++ +|+|.+--
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~~--i~~~~~aGAd~itvh~-- 88 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQDY--IAQLARAGADFITLHP-- 88 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---CSCEEEEEESSCGGGT--HHHHHHHTCSEEEECG--
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---CCcEEEEEEecCHHHH--HHHHHHcCCCEEEECc--
Confidence 345566 788887533 2332 356666666532 3456677899998664 6777766 89998741
Q ss_pred ccccC-CCCcHHHHHHHHHHHHHHCCCCccc
Q 016564 350 LGAEL-PIEEVPLLQVVFISDIRAMPRMSSS 379 (387)
Q Consensus 350 Lg~el-g~e~v~~~Qk~II~~c~aaGKp~g~ 379 (387)
|- . . --.+.++.++++|+.+|.
T Consensus 89 ---Ea~~----~-~~~~~i~~i~~~G~k~gv 111 (231)
T 3ctl_A 89 ---ETIN----G-QAFRLIDEIRRHDMKVGL 111 (231)
T ss_dssp ---GGCT----T-THHHHHHHHHHTTCEEEE
T ss_pred ---ccCC----c-cHHHHHHHHHHcCCeEEE
Confidence 22 1 1 135889999999998864
No 322
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=21.37 E-value=1.7e+02 Score=28.14 Aligned_cols=50 Identities=12% Similarity=0.242 Sum_probs=38.2
Q ss_pred HHHHHHHHHhCCceeEeecCC--CCHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Q 016564 123 REMIWKLAEAGMNVARLNMSH--GDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKG 176 (387)
Q Consensus 123 ~e~i~~Li~aGm~v~RiN~SH--g~~e~~~~~I~~iR~~~~~~~~~~i~I~lDL~G 176 (387)
.+..+++.+.|.+.+.|++.| ++++.-.+.++.+|++. . ..+.+++|..|
T Consensus 151 ~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~---g-~~~~l~vDan~ 202 (374)
T 3sjn_A 151 VAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAA---G-PEMEVQIDLAS 202 (374)
T ss_dssp HHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHH---C-SSSEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHh---C-CCCeEEEECCC
Confidence 466788888999999999987 46777777888888653 2 33788889764
No 323
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=20.94 E-value=1.8e+02 Score=28.46 Aligned_cols=20 Identities=20% Similarity=0.172 Sum_probs=16.8
Q ss_pred HHHHHHHHHhCCceeEeecC
Q 016564 123 REMIWKLAEAGMNVARLNMS 142 (387)
Q Consensus 123 ~e~i~~Li~aGm~v~RiN~S 142 (387)
.+.|+.|.+.|+|++|+-++
T Consensus 65 ~~dl~~~k~~G~N~vR~~~~ 84 (440)
T 1uuq_A 65 AKELDNLKAIGVNNLRVLAV 84 (440)
T ss_dssp HHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHcCCCEEEECcc
Confidence 46788899999999999843
No 324
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=20.86 E-value=1.5e+02 Score=28.90 Aligned_cols=63 Identities=8% Similarity=-0.004 Sum_probs=40.3
Q ss_pred HHHHhhHhcCCCEEEEcCCCC-HHHHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhh--cCeEEEcCCccc
Q 016564 280 DDIKFGVDNKVDFYAVSFVKD-AQVVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITA--SDGAMVARGDLG 351 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~s-a~dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~--sDGImIaRGDLg 351 (387)
+.++...+.|+|+|-+|--.+ .+-+..+++.+ ++.||+- | | .+..+++++. +|+|++||+=|+
T Consensus 246 ~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~-----~iPvi~~Ggi-t---~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 246 YVARELGKRGIAFICSREREADDSIGPLIKEAF-----GGPYIVNERF-D---KASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCCCTTCCHHHHHHHH-----CSCEEEESSC-C---HHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHC-----CCCEEEeCCC-C---HHHHHHHHHcCCccEEEECHHhHh
Confidence 334556678999999975321 13345556554 2455554 5 4 4566777775 899999998554
No 325
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=20.74 E-value=1.3e+02 Score=28.41 Aligned_cols=49 Identities=16% Similarity=0.185 Sum_probs=36.2
Q ss_pred EEEecCCCCCCHHHHHHHHHhCC-------------ceeEeecCCCCHHHHHHHHHHHHHHHH
Q 016564 112 IVCTIGPSTNTREMIWKLAEAGM-------------NVARLNMSHGDHASHQKVIDLVKEYNA 161 (387)
Q Consensus 112 II~TIGPss~~~e~i~~Li~aGm-------------~v~RiN~SHg~~e~~~~~I~~iR~~~~ 161 (387)
+...+. .....+..+.|.+.|+ +.+||++++-+.++..+.++.++++.+
T Consensus 374 ~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 374 FTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp EEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHH
T ss_pred EEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 444443 2344667788888776 679999998889999999998887654
No 326
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=20.35 E-value=3.9e+02 Score=22.56 Aligned_cols=50 Identities=20% Similarity=0.288 Sum_probs=19.6
Q ss_pred cccCccccccccccccCCCC---CCCCceEEEecCCCCCCHHHHHH-HHHhCCc
Q 016564 86 HFGGLQQLGDTSVSMWTKPT---VRRKTKIVCTIGPSTNTREMIWK-LAEAGMN 135 (387)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~p~---~~r~TKII~TIGPss~~~e~i~~-Li~aGm~ 135 (387)
|-.++..++.+-..|..+.. .....++|+|=+|...+.+...+ |.+.|++
T Consensus 10 ~~~~~~~~~~~~~~m~~p~~~~~~~~~~r~I~tq~P~~~t~~~~~~~L~~~gi~ 63 (189)
T 3rz2_A 10 HSSGLVPRGSHMARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVT 63 (189)
T ss_dssp -------------------CCCEEETTEEEEEECCCCTTTHHHHHHHHHTTTEE
T ss_pred ccCCcccCCchhhccCCCCCeeeecCCCeEEEeCCCCcccHHHHHHHHHHcCCc
Confidence 34455556666555543221 14578899999998877544444 4444554
No 327
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=20.33 E-value=1.2e+02 Score=30.71 Aligned_cols=76 Identities=11% Similarity=0.181 Sum_probs=44.4
Q ss_pred CCCCCCc-ccHHHHHhhHhcCCCEEEEcCCC---CHHHHHHHHHHHHhcCCCceEEE--ecCChhhhhcHHHHHhhcCeE
Q 016564 270 TLPSITE-KDWDDIKFGVDNKVDFYAVSFVK---DAQVVHELKNYLKSCGADIHVIV--KIESADSIPNLHSIITASDGA 343 (387)
Q Consensus 270 ~lp~LTe-~D~~dI~~a~~~gvD~I~lSfV~---sa~dV~~l~~~L~~~g~~i~IIA--KIEt~~gv~NL~eIl~~sDGI 343 (387)
.+..|.| ++.+.++.|++.|+|+|.+..-+ ..-|+....+++.....++.+|+ -|-|++-+..+-+ .+||+
T Consensus 157 gm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~---~a~av 233 (452)
T 1pii_A 157 EMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSH---FANGF 233 (452)
T ss_dssp TCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTT---TCSEE
T ss_pred CCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHH---hCCEE
Confidence 3334444 56788889999999999886422 11234444444443344555664 3566555544433 27899
Q ss_pred EEcCC
Q 016564 344 MVARG 348 (387)
Q Consensus 344 mIaRG 348 (387)
+||-+
T Consensus 234 LVGea 238 (452)
T 1pii_A 234 LIGSA 238 (452)
T ss_dssp EECHH
T ss_pred EEcHH
Confidence 99754
No 328
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=20.27 E-value=1.7e+02 Score=27.08 Aligned_cols=75 Identities=12% Similarity=0.242 Sum_probs=52.2
Q ss_pred CCCceEEEec----C-CCCCC-HHHHHHHHHhCCceeEeecCCCCHHHHHHHHHHHHHHHHhcCCCe-eEEEEeCCCCee
Q 016564 107 RRKTKIVCTI----G-PSTNT-REMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNV-IAIMLDTKGPEV 179 (387)
Q Consensus 107 ~r~TKII~TI----G-Pss~~-~e~i~~Li~aGm~v~RiN~SHg~~e~~~~~I~~iR~~~~~~~~~~-i~I~lDL~GPkI 179 (387)
...||||++- + |+..+ .+.+.+|.+.|.|++.|-..--+.++..++++..+++.+.....| |++.|--.|.--
T Consensus 137 ~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG~~G~~S 216 (258)
T 4h3d_A 137 KKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVIS 216 (258)
T ss_dssp HTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECTGGGGGG
T ss_pred hCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChHH
Confidence 4579999987 1 22111 256788899999999998887788888888887777665544444 667666556555
Q ss_pred ee
Q 016564 180 RS 181 (387)
Q Consensus 180 Rt 181 (387)
|+
T Consensus 217 Ri 218 (258)
T 4h3d_A 217 RL 218 (258)
T ss_dssp GT
T ss_pred HH
Confidence 53
No 329
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=20.18 E-value=3.2e+02 Score=26.49 Aligned_cols=69 Identities=3% Similarity=-0.023 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhcCCCceEEEe--cCChhhhhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCC
Q 016564 303 VVHELKNYLKSCGADIHVIVK--IESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRM 376 (387)
Q Consensus 303 dV~~l~~~L~~~g~~i~IIAK--IEt~~gv~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp 376 (387)
+++.++++-+ ...++.||+- |.|.+-+. +-|..=+|+|||||+=+.- |..-+..+.+.+-....+.|..
T Consensus 264 a~~~i~~v~~-~~~~ipII~~GGI~s~~da~--~~l~aGAd~V~vgra~l~~--GP~~~~~i~~~l~~~m~~~G~~ 334 (354)
T 4ef8_A 264 ALANINAFYR-RCPGKLIFGCGGVYTGEDAF--LHVLAGASMVQVGTALQEE--GPSIFERLTSELLGVMAKKRYQ 334 (354)
T ss_dssp HHHHHHHHHH-HCTTSEEEEESCCCSHHHHH--HHHHHTEEEEEECHHHHHH--CTTHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHH-hCCCCCEEEECCcCCHHHHH--HHHHcCCCEEEEhHHHHHh--CHHHHHHHHHHHHHHHHHcCCC
Confidence 4555554333 3456888875 77765442 2233349999999987642 4444556666777777777754
No 330
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=20.12 E-value=90 Score=28.79 Aligned_cols=48 Identities=13% Similarity=0.074 Sum_probs=33.4
Q ss_pred hhcHHHHHhhcCeEEEcCCcccccCCCCcHHHHHHHHHHHHHHCCCCccccccc
Q 016564 330 IPNLHSIITASDGAMVARGDLGAELPIEEVPLLQVVFISDIRAMPRMSSSIKAF 383 (387)
Q Consensus 330 v~NL~eIl~~sDGImIaRGDLg~elg~e~v~~~Qk~II~~c~aaGKp~g~id~~ 383 (387)
++.+.++++.+|.+.|+.|=+ -++.......+++.+++.++|+ .+|..
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pv-VlDpv 94 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPI-VLDPV 94 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCE-EEECT
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcE-EEcCc
Confidence 556778888899999976643 2233345567788888999985 36654
No 331
>3oru_A DUF1989 family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, metal binding PR; HET: MSE; 1.11A {Ruegeria SP} PDB: 3siy_A*
Probab=20.11 E-value=1.5e+02 Score=27.51 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=35.7
Q ss_pred CeEecCCCEEEEEecCCCCCccEEEeccCCc--------------ccccCcCCEEEEeCCeEEEEEEE
Q 016564 187 PITLTSGQEFTFTIQRGVGSAECVSVNYDDF--------------VNDVEVGDMLLVDGGMMSLLVKS 240 (387)
Q Consensus 187 ~i~Lk~G~~v~lt~~~~~g~~~~i~v~~~~l--------------~~~v~~Gd~IliDDG~I~l~V~~ 240 (387)
...|++||.++|+.-++.-....+..|.++. --.+.+|+.+|=|.|+..++|++
T Consensus 46 s~~v~~Gq~lRI~d~eG~Q~~D~l~~na~d~~Er~s~~~T~~~q~~~~lt~G~~L~S~~gRpl~tIv~ 113 (234)
T 3oru_A 46 AIRMAQGEALMVINRDGSQIGDFWAFVEGDCGEYLSMEHLRPTLRRVSPRPGDVLVSNRRRPILTLLE 113 (234)
T ss_dssp EEEECTTCEEEEECSSSSCCEEEEEEETTEEEEEBCHHHHHHHHTSSSCCTTCEEEBTTSSEEEEEEE
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEEecCCCCccccCHHHHHHHhccccCCCCCEeEeCCCCeeEEEEc
Confidence 3679999999998654321112222232221 12578999999999999999875
No 332
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=20.11 E-value=2.9e+02 Score=23.50 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=41.0
Q ss_pred HHHHHhhHhcCCCEEEEcC--CC------CHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh-cCeEEEcCCc
Q 016564 279 WDDIKFGVDNKVDFYAVSF--VK------DAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA-SDGAMVARGD 349 (387)
Q Consensus 279 ~~dI~~a~~~gvD~I~lSf--V~------sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~-sDGImIaRGD 349 (387)
.+++..+.+.|+|+|.++- .. ...+...++++.... ++++++- =-.. .+|+.+++++ +||+.+|++=
T Consensus 118 ~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~-GGI~-~~nv~~~~~~Ga~gv~vgs~i 193 (215)
T 1xi3_A 118 LEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAI-GGIN-KDNAREVLKTGVDGIAVISAV 193 (215)
T ss_dssp HHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEE-SSCC-TTTHHHHHTTTCSEEEESHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEE-CCcC-HHHHHHHHHcCCCEEEEhHHH
Confidence 3445567788999999853 21 123445555443332 4555552 1112 4688887776 8999999874
Q ss_pred cc
Q 016564 350 LG 351 (387)
Q Consensus 350 Lg 351 (387)
+.
T Consensus 194 ~~ 195 (215)
T 1xi3_A 194 MG 195 (215)
T ss_dssp HT
T ss_pred hC
Confidence 43
No 333
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=20.02 E-value=1.4e+02 Score=26.99 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=30.4
Q ss_pred HHHHhhHhcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCceEEEecCChhhhhcHHHHHhh----cCeEEEc
Q 016564 280 DDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITA----SDGAMVA 346 (387)
Q Consensus 280 ~dI~~a~~~gvD~I~lSfV~sa~dV~~l~~~L~~~g~~i~IIAKIEt~~gv~NL~eIl~~----sDGImIa 346 (387)
++++.+++.|+|||..|- .+.+-++..++ .|.. ++. |+.+..|+.++ +|.|.+=
T Consensus 80 d~~~~A~~aGAd~v~~p~-~d~~v~~~ar~----~g~~--~i~------Gv~t~~e~~~A~~~Gad~vk~F 137 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPG-LNPKIVKLCQD----LNFP--ITP------GVNNPMAIEIALEMGISAVKFF 137 (224)
T ss_dssp HHHHHHHHHTCSEEECSS-CCHHHHHHHHH----TTCC--EEC------EECSHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHHCCCCEEEECC-CCHHHHHHHHH----hCCC--EEe------ccCCHHHHHHHHHCCCCEEEEe
Confidence 567778888999998883 44433444433 2322 222 34455555544 6766663
Done!