BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016565
(387 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255560275|ref|XP_002521155.1| protein binding protein, putative [Ricinus communis]
gi|223539724|gb|EEF41306.1| protein binding protein, putative [Ricinus communis]
Length = 598
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/360 (55%), Positives = 248/360 (68%), Gaps = 13/360 (3%)
Query: 14 AVKRELLLGDDVI--PYVYELPADLFDILLTCLPPLALQKLQTKMPFRD--GDDCG-SPD 68
A+KR+L+ GDDV+ +YE+P+ LF IL+T LPPLAL LQ +MP+ + G +C D
Sbjct: 3 AIKRQLISGDDVLMLAEIYEIPSHLFSILVTKLPPLALHNLQMEMPYENSNGYECSDGGD 62
Query: 69 YCFENGRKRGRYGNFNTVWKKLFKTRWSGF--TDQIEPVDWQQRYWEAHVQGCLDEAAEL 126
C + GRKRGR FNT WK LFK RW TD +E +W Q YWE H+Q CLDEAA
Sbjct: 63 GCSKIGRKRGRSCKFNTEWKTLFKLRWPQIVDTDSVESDNWHQAYWEKHLQNCLDEAAGS 122
Query: 127 VVLPSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALC 186
++ SF G I +I + D IL +IG E +NH YSKLSYH QQ GHYARCLRLQN LC
Sbjct: 123 SMV-SFDGCIGEIKVPDYILKWIGCEGHLNHSI--YSKLSYHFQQLGHYARCLRLQNVLC 179
Query: 187 VEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGIC 246
V ETCQLLR S+LQ+L LRWIR +EHV LC+LLIQN ETL SLEF+HCKLS +FV+ IC
Sbjct: 180 VAETCQLLRNSQLQNLALRWIRSQEHVDGLCQLLIQNRETLTSLEFVHCKLSSTFVDAIC 239
Query: 247 RSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFG 306
RSL K K+ H I+N SI S F+E S+ LVSFLSSGRSLCSL+ HLDR F
Sbjct: 240 RSLEIKDKQTHGIKNFSIRTSIFLETDLVSLPPSLVSFLSSGRSLCSLRFSGNHLDRKFA 299
Query: 307 RMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLF---SLGAGKSLQSLRLLNLRYD 363
R++F+ L + SS++S+LDLS N I GWLS ++R + G KSLQSLR+LN+R +
Sbjct: 300 RILFTLLFDDSSNISVLDLSDNIIAGWLSNFNRGSSSMVPSTFGITKSLQSLRILNVRNN 359
>gi|297744269|emb|CBI37239.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 264/402 (65%), Gaps = 22/402 (5%)
Query: 1 MVKAPSLISLAALAVKRELL---LGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMP 57
M + PSL+SL + +++L G+D+ +YELP+ LFD LL LPPL LQKLQ +MP
Sbjct: 1 MAEVPSLMSLCMKKLGKDILRDDFGNDLSSAIYELPSVLFDGLLMHLPPLTLQKLQEEMP 60
Query: 58 FRDGDDCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIEPVDW---------- 107
R + S + CF NGRKRG GNFNT WK LFK+RW +I+ VDW
Sbjct: 61 LRCWNGHESTNICFRNGRKRGSCGNFNTAWKALFKSRWPDLARKIQRVDWSAGVAKYESI 120
Query: 108 ---QQRYWEAHVQGCLDEAAELVVLPSFRGLISDINISDTILNYIGYEQQMNHLACDYSK 164
QQ YWE H+Q C+DEAAE+ VLPSF G + +I I DTI+ I Y+ +H DYSK
Sbjct: 121 IDWQQMYWETHLQNCIDEAAEIAVLPSFDGGLGEIEIPDTIIKCIVYKGHRSHSTRDYSK 180
Query: 165 LSYHCQQFGHYARCLRLQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNS 224
LSYHC+QFG YARCL+LQN LC+ ET LLR+S+LQ LVLRWI+ EH+ LC+LL QN+
Sbjct: 181 LSYHCEQFGSYARCLKLQNMLCIAETSHLLRKSRLQQLVLRWIKSSEHMDGLCQLLQQNN 240
Query: 225 ETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSF 284
ETL+SLEF+ C LS + + IC SL K + +++++ SI S+ +E P S+ LVSF
Sbjct: 241 ETLSSLEFIFCNLSSASLNAICDSLRVKDMQTYRVQHFSI-TSTVLERNPLSLPHGLVSF 299
Query: 285 LSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDR---SG 341
LSSGRSLCSLK L ++F ++VF++LL+ASS LS L+ N+I GWL +++ +
Sbjct: 300 LSSGRSLCSLKFSDNRLGKNFAKLVFNTLLDASSRLSTLNFEDNNITGWLFNFNQRSSTW 359
Query: 342 PLFSLGAGKSLQSLRLLNLRYDMI--GNAVSLLLCKLFFPTI 381
PL S G GKSLQ LR+LNLR + + +A SL ++ P +
Sbjct: 360 PLPSFGLGKSLQLLRVLNLRGNNLCKDDADSLKYALIYMPNL 401
>gi|356503658|ref|XP_003520623.1| PREDICTED: uncharacterized protein LOC100794405 [Glycine max]
Length = 604
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 236/366 (64%), Gaps = 7/366 (1%)
Query: 5 PSLISLAALAVKRELL--LGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFRDGD 62
PSL+S+ A+ ++LL DD++P +Y+LP+ L D L+T LPPLAL+ +PF D
Sbjct: 6 PSLLSVCIDALTQQLLRPCDDDLLPCIYDLPSHLLDTLITRLPPLALRTFHHHLPF---D 62
Query: 63 DCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIEPVDWQQRYWEAHVQGCLDE 122
+ G RKR R N N+ W++LF+ RW QI DW+Q YWE H+Q CLDE
Sbjct: 63 EEGFSHDDSTKKRKRARDWNLNSAWQRLFQLRWPDRVKQIHRTDWEQLYWETHLQDCLDE 122
Query: 123 AAELVVLPSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQ 182
A E+ ++PSF G I DI ISD+IL YIG+ NH CD+SKLSYHC QFG + CL LQ
Sbjct: 123 AVEVALIPSFTGYIGDIQISDSILKYIGFVGNTNHSTCDHSKLSYHCLQFGSHVSCLGLQ 182
Query: 183 NALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFV 242
N LC ET LLRE KLQSLVLR IR +E + LCKLL Q+ TL SLEF+HC LS F+
Sbjct: 183 NVLCTAETSVLLRECKLQSLVLRCIRSKEQIDGLCKLLAQHCRTLTSLEFVHCALSTDFI 242
Query: 243 EGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLD 302
I SL +R + H I++LSI +SF+E C S+ LVSFLSSGRSLCSLKL H
Sbjct: 243 NAIFGSLVIERVQKHGIQHLSIIATSFLEPCTVSLPSGLVSFLSSGRSLCSLKLSENHHG 302
Query: 303 RDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDR--SGPLFSLGAGKSLQSLRLLNL 360
F + +F +LL SS +S+LDLS N I GWL Y R SG S G GKSL+ LR+LNL
Sbjct: 303 WTFAKDLFVTLLNLSSGISVLDLSRNRISGWLFYYRRSLSGSHLSFGNGKSLKLLRVLNL 362
Query: 361 RYDMIG 366
R + +G
Sbjct: 363 RENNLG 368
>gi|449475557|ref|XP_004154489.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101227026 [Cucumis sativus]
Length = 604
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/364 (53%), Positives = 239/364 (65%), Gaps = 4/364 (1%)
Query: 1 MVKAPSLISLAALAVKRELLLGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFRD 60
M +APSL+SL V+ E+L DDV P +Y+LP L D L LPPLAL+ LQ+ MPF
Sbjct: 1 MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMPFEL 60
Query: 61 GDDCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIEPVDWQQRYWEAHVQGCL 120
++ + C +GRKR R NFN WKK F RWS TD I+PVDWQQ YWE H+Q CL
Sbjct: 61 QNEDEYDNNCLMDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCL 120
Query: 121 DEAAELVVLPSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLR 180
DEAAE+ LPSF I +I +SD+IL YI ++ ++ Y LSYHCQ+FG YA CLR
Sbjct: 121 DEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYALCLR 180
Query: 181 LQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPS 240
LQ+ LCV E +LR +LQ+L+LRWIRF E V LCKLL QN ETL SLE +HCKLS +
Sbjct: 181 LQSVLCVSEIYHILRSCRLQTLLLRWIRFPEQVNGLCKLLNQNRETLTSLELIHCKLSST 240
Query: 241 FVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCH 300
V IC +L RK H I + SI+ S F E P ++ LVSF SSGR L S KL
Sbjct: 241 SVNSICDALIHNRK-THGILHFSINGSRFDETEPVALPSGLVSFXSSGRYLYSFKLCDND 299
Query: 301 LDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDR---SGPLFSLGAGKSLQSLRL 357
L ++FG+ VF +LL+ASS LS+LDLS N + GWLS ++R +G S GKSLQSLR+
Sbjct: 300 LGKNFGKFVFHTLLDASSCLSVLDLSENKMTGWLSNFNRRSLTGLQASSMVGKSLQSLRV 359
Query: 358 LNLR 361
LNLR
Sbjct: 360 LNLR 363
>gi|449443929|ref|XP_004139728.1| PREDICTED: uncharacterized protein LOC101206924 [Cucumis sativus]
Length = 604
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/364 (53%), Positives = 239/364 (65%), Gaps = 4/364 (1%)
Query: 1 MVKAPSLISLAALAVKRELLLGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFRD 60
M +APSL+SL V+ E+L DDV P +Y+LP L D L LPPLAL+ LQ+ MPF
Sbjct: 1 MAEAPSLLSLCIALVRDEILQRDDVPPALYDLPPHLLDTLALRLPPLALRNLQSGMPFEL 60
Query: 61 GDDCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIEPVDWQQRYWEAHVQGCL 120
++ + C +GRKR R NFN WKK F RWS TD I+PVDWQQ YWE H+Q CL
Sbjct: 61 QNEDEYDNNCLMDGRKRRRSSNFNLAWKKNFDLRWSKLTDTIQPVDWQQIYWETHLQSCL 120
Query: 121 DEAAELVVLPSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLR 180
DEAAE+ LPSF I +I +SD+IL YI ++ ++ Y LSYHCQ+FG YA CLR
Sbjct: 121 DEAAEIASLPSFSKCIGEIEMSDSILKYIASKESVHFWRAKYRYLSYHCQEFGCYALCLR 180
Query: 181 LQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPS 240
LQ+ LCV E +LR +LQ+L+LRWIRF E V LCKLL QN ETL SLE +HCKLS +
Sbjct: 181 LQSVLCVSEIYHILRSCRLQTLLLRWIRFPEQVNGLCKLLNQNRETLTSLELIHCKLSST 240
Query: 241 FVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCH 300
V IC +L RK H I + SI+ S F E P ++ LVSF SSGR L S KL
Sbjct: 241 SVNSICDALIHNRK-THGILHFSINGSRFDETEPVALPSGLVSFFSSGRYLYSFKLCDND 299
Query: 301 LDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDR---SGPLFSLGAGKSLQSLRL 357
L ++FG+ VF +LL+ASS LS+LDLS N + GWLS ++R +G S GKSLQSLR+
Sbjct: 300 LGKNFGKFVFHTLLDASSCLSVLDLSENKMTGWLSNFNRRSLTGLQASSMVGKSLQSLRV 359
Query: 358 LNLR 361
LNLR
Sbjct: 360 LNLR 363
>gi|359480084|ref|XP_002267362.2| PREDICTED: uncharacterized protein LOC100261775 [Vitis vinifera]
Length = 834
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/377 (49%), Positives = 243/377 (64%), Gaps = 29/377 (7%)
Query: 23 DDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFRDGDDCGSPDYCFENGRKRGRYGN 82
+D+ +YELP+ LFD LL LPPL LQKLQ +MP R + S + CF NGRKRG GN
Sbjct: 81 NDLSSAIYELPSVLFDGLLMHLPPLTLQKLQEEMPLRCWNGHESTNICFRNGRKRGSCGN 140
Query: 83 FNTVWKKLFKTRWSGFTDQIEPVDW-------------QQRYWEAHVQGCLDEAAELVVL 129
FNT WK LFK+RW +I+ VDW QQ YWE H+Q C+DEAAE+ VL
Sbjct: 141 FNTAWKALFKSRWPDLARKIQRVDWSAGVAKYESIIDWQQMYWETHLQNCIDEAAEIAVL 200
Query: 130 PSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEE 189
PSF G + +I I +H DYSKLSYHC+QFG YARCL+LQN LC+ E
Sbjct: 201 PSFDGGLGEIEIPG----------HRSHSTRDYSKLSYHCEQFGSYARCLKLQNMLCIAE 250
Query: 190 TCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSL 249
T LLR+S+LQ LVLRWI+ EH+ LC+LL QN+ETL+SLEF+ C LS + + IC SL
Sbjct: 251 TSHLLRKSRLQQLVLRWIKSSEHMDGLCQLLQQNNETLSSLEFIFCNLSSASLNAICDSL 310
Query: 250 CSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMV 309
K + +++++ SI S+ +E P S+ LVSFLSSGRSLCSLK L ++F ++V
Sbjct: 311 RVKDMQTYRVQHFSI-TSTVLERNPLSLPHGLVSFLSSGRSLCSLKFSDNRLGKNFAKLV 369
Query: 310 FSSLLEASSSLSILDLSGNSIGGWLSKYDR---SGPLFSLGAGKSLQSLRLLNLRYDMI- 365
F++LL+ASS LS L+ N+I GWL +++ + PL S G GKSLQ LR+LNLR + +
Sbjct: 370 FNTLLDASSRLSTLNFEDNNITGWLFNFNQRSSTWPLPSFGLGKSLQLLRVLNLRGNNLC 429
Query: 366 -GNAVSLLLCKLFFPTI 381
+A SL ++ P +
Sbjct: 430 KDDADSLKYALIYMPNL 446
>gi|356570694|ref|XP_003553520.1| PREDICTED: uncharacterized protein LOC100817679 [Glycine max]
Length = 625
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 184/387 (47%), Positives = 235/387 (60%), Gaps = 28/387 (7%)
Query: 5 PSLISLAALAVKRELLLGDDVIPYVYELPADLFDILLTCLPPLALQKLQTK-MPFRDGDD 63
PSLISL A+ ++ L D +P +Y+LP+ L L+T LPP AL+ +PF D+
Sbjct: 6 PSLISLCIDALAQQFLRPSDDLPSIYDLPSHLLHTLITRLPPFALRTFHRHHLPF---DE 62
Query: 64 CGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIEPVDWQQRYWEAHVQGCLDEA 123
G RKR R N ++ W++LF RW QI+P DW+Q YWE H+Q CLDEA
Sbjct: 63 EGFSRDDSTKKRKRARDWNLSSAWQRLFLLRWPDRVKQIQPTDWEQHYWEIHLQDCLDEA 122
Query: 124 AELVVLPSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQN 183
AE+ ++PSF G I DI ISD+IL YIG+ +H +CD+SKLSYHC QFG + CL LQN
Sbjct: 123 AEVALIPSFSGYIGDIQISDSILKYIGFVGNTSHSSCDHSKLSYHCLQFGSHVSCLMLQN 182
Query: 184 ALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVE 243
LC ET LLRE KLQSLVLR IR +E + LCKLL Q+ L SLEF+HC LS F+
Sbjct: 183 VLCTAETSVLLRECKLQSLVLRCIRSKEQIDGLCKLLAQHCRMLTSLEFVHCTLSTDFIN 242
Query: 244 GICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSG--------------- 288
I SL +R + H I++LSI +SF+E C S+ L+SFLSSG
Sbjct: 243 AIFGSLVIERVQKHGIQHLSIIATSFLEPCAVSLPSGLMSFLSSGRYMSIIAFLSVEYLP 302
Query: 289 ------RSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDR--- 339
RSLCSLKL R F + +F +LL SS +S+LDLS N I GWLS ++R
Sbjct: 303 YATAATRSLCSLKLSDNQHGRTFAKDLFVTLLNLSSGISVLDLSENRIAGWLSDFNRRFL 362
Query: 340 SGPLFSLGAGKSLQSLRLLNLRYDMIG 366
SG S G GKSL+ LR+LNLR + +G
Sbjct: 363 SGSHMSFGNGKSLKLLRVLNLRENNLG 389
>gi|42569177|ref|NP_179611.2| leucine-rich repeats-ribonuclease inhibitor domain-containing
protein [Arabidopsis thaliana]
gi|330251888|gb|AEC06982.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
protein [Arabidopsis thaliana]
Length = 604
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/369 (52%), Positives = 236/369 (63%), Gaps = 14/369 (3%)
Query: 1 MVKAPSLISLAALAVKRELLLGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPF-- 58
M KAPSL L ++K +LL D+ IP +YELP++L D ++ LP LALQK QT MPF
Sbjct: 1 MTKAPSLAFLCIQSLKIQLLESDNPIPDLYELPSELLDGIVAHLPALALQKFQTNMPFHC 60
Query: 59 ----RDGDDCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIE-PVDWQQRYWE 113
GDDC C GRKR R + WK LFK RW F D++E P DWQQ YWE
Sbjct: 61 LDSYESGDDC-----CLITGRKRARNDVLGSSWKLLFKLRWPDFVDRVESPADWQQLYWE 115
Query: 114 AHVQGCLDEAAELVVLPSFRGLISDINISDTILNYIGYEQQ-MNHLACDYSKLSYHCQQF 172
H+Q C+DEAAE+ + P+F G I IN+SD IL YI +E+ M C +LS+H Q F
Sbjct: 116 KHLQNCVDEAAEVALRPTFSGRICSINVSDNILRYICHEEHIMTCQNCVCKELSFHFQTF 175
Query: 173 GHYARCLRLQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEF 232
G Y RCLRL N LCV ET +LLR SKL+SLVLRWIR E+HV+ LCKLLIQ+ ETL SLE
Sbjct: 176 GPYLRCLRLLNVLCVTETSELLRTSKLRSLVLRWIRSEKHVEPLCKLLIQSRETLTSLEL 235
Query: 233 LHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLC 292
+HCKLS S + IC SL K ++ I SS IE P + VSFL S R+L
Sbjct: 236 IHCKLSLSSISAICTSLHEKGIHTTGMQRFCIKTSS-IEIDPLAAPSAFVSFLMSVRTLH 294
Query: 293 SLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSL 352
SL +LDR F RMVFS+LL++SS+LS LDLS N+I GWLS + + SL +GKSL
Sbjct: 295 SLHFGDSNLDRYFARMVFSTLLDSSSNLSSLDLSENNISGWLSTFSCKSVVGSLSSGKSL 354
Query: 353 QSLRLLNLR 361
QSL LNLR
Sbjct: 355 QSLCKLNLR 363
>gi|297832112|ref|XP_002883938.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329778|gb|EFH60197.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 603
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 234/363 (64%), Gaps = 3/363 (0%)
Query: 1 MVKAPSLISLAALAVKRELLLGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFRD 60
M KAPSL L ++K +LL D+ IP +YELP++L D ++ LP LALQ QT MPF
Sbjct: 1 MTKAPSLAFLCIQSLKLQLLDSDNPIPDLYELPSELLDAVIAHLPALALQNFQTNMPFNC 60
Query: 61 GDDCGSPDYCFENGRKRG-RYGNFNTVWKKLFKTRWSGFTDQIE-PVDWQQRYWEAHVQG 118
DD S D C NGRKR R + WK LFK RW F D++E P DWQQ YWE H+Q
Sbjct: 61 LDDYESGDDCLINGRKRSSRNDPLGSSWKMLFKLRWPDFVDRVESPADWQQLYWEKHLQN 120
Query: 119 CLDEAAELVVLPSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARC 178
C+DEAAE+ + P+F G I IN+SD IL YI +E+ M+ C +LS+H Q FG Y RC
Sbjct: 121 CVDEAAEVALRPTFSGRIRSINVSDNILRYICHEEHMSCQKCVCKELSFHFQTFGPYLRC 180
Query: 179 LRLQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLS 238
LRL N LCV ET +LL SKLQSLVLRWIR E+HV+ LCKLLIQ +TL SLEF+HCKLS
Sbjct: 181 LRLLNVLCVTETSELLMTSKLQSLVLRWIRSEKHVEPLCKLLIQTRDTLTSLEFIHCKLS 240
Query: 239 PSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRH 298
S + IC SL K ++ I SS IE P + VSFL S R+L SL
Sbjct: 241 SSSISAICASLHEKGIHTTGMQRFCIKTSS-IEIDPLAAPSAFVSFLMSVRTLHSLHFCD 299
Query: 299 CHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLL 358
+LDR RMVFS+LL++SS+LS LDLS N+I GWLS + + SL +GK LQSL L
Sbjct: 300 SNLDRHIARMVFSTLLDSSSNLSSLDLSENNISGWLSTFSCRSVVGSLSSGKFLQSLCKL 359
Query: 359 NLR 361
NLR
Sbjct: 360 NLR 362
>gi|357154921|ref|XP_003576947.1| PREDICTED: uncharacterized protein LOC100822893 [Brachypodium
distachyon]
Length = 653
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 201/364 (55%), Gaps = 17/364 (4%)
Query: 32 LPADLFDILLTCLPPLALQKLQTKMPFRDGDDC------GSPDYCFENGRKRGRYGNFNT 85
LP +L L L P AL+ L R G D G KR R +FNT
Sbjct: 75 LPWELLHQLAPRLSPFALESLHDAAHARCCSSASTTVRFGGLDGGNRRGIKRSRCEDFNT 134
Query: 86 VWKKLFKTRW-----SGFTDQIEPVDWQQRYWEAHVQGCLDEAAELVVLPSFRGLISDIN 140
W+ LFK RW +G + + VDWQQ+YWE H+Q CLDEAAE +LPSFRG I ++
Sbjct: 135 TWQALFKCRWPLDDCTGQANFVT-VDWQQQYWEKHLQECLDEAAEAALLPSFRGSIDELI 193
Query: 141 ISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEETCQLLRESKLQ 200
IS I++ + ++ YS+LSYHC + G+Y R LRLQN LC E C +L+ S+L+
Sbjct: 194 ISAKIMSSVYLSADISQ---QYSRLSYHCTRLGYYVRRLRLQNVLCTVEICSMLQHSRLE 250
Query: 201 SLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIE 260
+LV I E V +C LL +++TL SLEF+HC+L P ++ IC SLC + + H+I+
Sbjct: 251 TLVFIRIISEAEVNGVCLLLSCHAKTLVSLEFIHCQLYPVVMDKICSSLCQQGSQNHEIQ 310
Query: 261 NLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSL 320
LSI S E+ PS++ L++FLS +SL L L + F +++ +LL++S L
Sbjct: 311 RLSIKSSRVCESNPSTISAGLLNFLSHAKSLQLLSLNDAKMQPSFAKIIIHTLLKSSCGL 370
Query: 321 SILDLSGNSIGGWLSKYDRSGPLFS--LGAGKSLQSLRLLNLRYDMIGNAVSLLLCKLFF 378
LD+S N I GWLS DRS FS L + SL SL +L LR + + LC +
Sbjct: 371 QTLDISENDIAGWLSTVDRSCTSFSSELESNTSLSSLTVLKLRGNNLQKGDMEDLCNIIA 430
Query: 379 PTIN 382
N
Sbjct: 431 KMSN 434
>gi|77554041|gb|ABA96837.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
Japonica Group]
gi|125578887|gb|EAZ20033.1| hypothetical protein OsJ_35632 [Oryza sativa Japonica Group]
Length = 648
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 162/276 (58%), Gaps = 7/276 (2%)
Query: 74 GRKRGRYGNFNTVWKKLFKTRW----SGFTDQIEPVDWQQRYWEAHVQGCLDEAAELVVL 129
G KR R +FN W+ LF RW + D + VDWQ++YWE H+Q CLDEAAE +L
Sbjct: 117 GIKRSRCEDFNPEWQALFGLRWPRCDNAGHDGLLTVDWQRQYWEKHLQECLDEAAESALL 176
Query: 130 PSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEE 189
PSF G I ++ I I++ I + + + YS+LS+HC FG YARCLRLQ+ LC E
Sbjct: 177 PSFCGSIDELTIPAKIVSCILHTKDIPQ---QYSRLSFHCSSFGCYARCLRLQSVLCTAE 233
Query: 190 TCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSL 249
LL+ SKL+ L+ I + V +C LL ++ETL SLEF+HC+LSP+ ++ IC S+
Sbjct: 234 ISDLLQGSKLEKLMFVRIISDLEVNGVCMLLSCHAETLLSLEFIHCQLSPAVMDKICNSV 293
Query: 250 CSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMV 309
K H I+N SI S E+ ++ L+ FLS G+SL L L + F +++
Sbjct: 294 LQKGSVNHGIQNFSIKSSRICESNTLNISAGLLDFLSMGKSLQWLSLNDTKMQPLFAKII 353
Query: 310 FSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFS 345
+LL +SS + L++S N+I GWL D+ FS
Sbjct: 354 VHTLLGSSSGIRTLEISENNIAGWLKTMDKRFACFS 389
>gi|218186616|gb|EEC69043.1| hypothetical protein OsI_37874 [Oryza sativa Indica Group]
Length = 648
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 162/276 (58%), Gaps = 7/276 (2%)
Query: 74 GRKRGRYGNFNTVWKKLFKTRW----SGFTDQIEPVDWQQRYWEAHVQGCLDEAAELVVL 129
G KR R +FN W+ LF RW + D + VDWQ++YWE H+Q CLDEAAE +L
Sbjct: 117 GIKRSRCEDFNPEWQALFGLRWPRCDNAGHDGLLTVDWQRQYWEKHLQECLDEAAESALL 176
Query: 130 PSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEE 189
PSF G I ++ I I++ I + + + YS+LS+HC FG YARCLRLQ+ LC E
Sbjct: 177 PSFCGSIDELTIPAKIVSCILHTKDIPR---QYSRLSFHCSSFGCYARCLRLQSVLCTAE 233
Query: 190 TCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSL 249
LL+ SKL+ L+ I + V +C LL ++ETL SLEF+HC+LSP+ ++ IC S+
Sbjct: 234 ISDLLQGSKLEKLMFVRIISDLEVNGVCILLSCHAETLLSLEFIHCQLSPAVMDKICNSV 293
Query: 250 CSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMV 309
K H I+N SI S E+ ++ L+ FLS G+SL L L + F +++
Sbjct: 294 LQKGSVNHGIQNFSIKSSRICESNTLNISAGLLDFLSMGKSLQWLSLNDTKMQPLFAKII 353
Query: 310 FSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFS 345
+LL +SS + L++S N+I GWL D+ FS
Sbjct: 354 VHTLLGSSSGIRTLEISENNIAGWLKTMDKRFACFS 389
>gi|110737874|dbj|BAF00875.1| hypothetical protein [Arabidopsis thaliana]
Length = 518
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/256 (50%), Positives = 159/256 (62%), Gaps = 2/256 (0%)
Query: 107 WQQRYWEAHVQGCLDEAAELVVLPSFRGLISDINISDTILNYIGYEQQ-MNHLACDYSKL 165
W + G E+ + P+F G I IN+SD IL YI +E+ M C +L
Sbjct: 23 WNHQLIGNSFTGKSISKTEVALRPTFSGRICSINVSDNILRYICHEEHIMTCQNCVCKEL 82
Query: 166 SYHCQQFGHYARCLRLQNALCVEETCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSE 225
S+H Q FG Y RCLRL N LCV ET +LLR SKL+SLVLRWIR E+HV+ LCKLLIQ+ E
Sbjct: 83 SFHFQTFGPYLRCLRLLNVLCVTETSELLRTSKLRSLVLRWIRSEKHVEPLCKLLIQSRE 142
Query: 226 TLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFL 285
TL SLE +HCKLS S + IC SL K ++ I SS IE P + VSFL
Sbjct: 143 TLTSLELIHCKLSLSSISAICTSLHEKGIHTTGMQRFCIKTSS-IEIDPLAAPSAFVSFL 201
Query: 286 SSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFS 345
S R+L SL +LDR F RMVFS+LL++SS+LS LDLS N+I GWLS + + S
Sbjct: 202 MSVRTLHSLHFGDSNLDRYFARMVFSTLLDSSSNLSSLDLSENNISGWLSTFSCKSVVGS 261
Query: 346 LGAGKSLQSLRLLNLR 361
L +GKSLQSL LNLR
Sbjct: 262 LSSGKSLQSLCKLNLR 277
>gi|4512715|gb|AAD21768.1| unknown protein [Arabidopsis thaliana]
Length = 190
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 118/197 (59%), Gaps = 16/197 (8%)
Query: 1 MVKAPSLISLAALAVKRELLLGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFR- 59
M KAPSL L ++K +LL D+ IP +YELP++L D ++ LP LALQK QT MPF
Sbjct: 1 MTKAPSLAFLCIQSLKIQLLESDNPIPDLYELPSELLDGIVAHLPALALQKFQTNMPFHC 60
Query: 60 -----DGDDCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIE-PVDWQQRYWE 113
GDDC C GRKR R + WK LFK RW F D++E P DWQQ YWE
Sbjct: 61 LDSYESGDDC-----CLITGRKRARNDVLGSSWKLLFKLRWPDFVDRVESPADWQQLYWE 115
Query: 114 AHVQGCLDEAAELVVLPSFRGLISDINISDTILNYIGYEQQ-MNHLACDYSKLSYHCQQF 172
H+Q C+DEAAE+ + P+F G I IN+SD IL YI +E+ M C +LS+H Q F
Sbjct: 116 KHLQNCVDEAAEVALRPTFSGRICSINVSDNILRYICHEEHIMTCQNCVCKELSFHFQTF 175
Query: 173 GHYARCLRLQNALCVEE 189
G Y LRL N CV +
Sbjct: 176 GPY---LRLSNISCVSD 189
>gi|357510355|ref|XP_003625466.1| hypothetical protein MTR_7g099440 [Medicago truncatula]
gi|355500481|gb|AES81684.1| hypothetical protein MTR_7g099440 [Medicago truncatula]
Length = 249
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 118/184 (64%), Gaps = 7/184 (3%)
Query: 3 KAP--SLISLAALAVKRELLLGDD----VIPYVYELPADLFDILLTCLPPLALQKLQTKM 56
+AP SLI+L + +LL G+D +IP +YELP+ L D L++ L P AL M
Sbjct: 4 EAPPSSLITLCIDHLANQLLFGEDEVIAIIPVIYELPSHLLDDLISRLTPHALYHFHLHM 63
Query: 57 PFRD-GDDCGSPDYCFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIEPVDWQQRYWEAH 115
PF+D ++ S D N RKR R N NT W+KLF+ RW +QI+P DWQ+ YWEAH
Sbjct: 64 PFQDVNEEDFSRDDSTNNKRKRSRDWNLNTAWQKLFELRWPDLINQIQPSDWQKAYWEAH 123
Query: 116 VQGCLDEAAELVVLPSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHY 175
+Q CLDEAAE+ ++ F+G ++DINIS++IL +IG+ + H YSKLSYHC QFG +
Sbjct: 124 LQNCLDEAAEIALISPFKGRLADINISESILRHIGFVRLAEHEYDKYSKLSYHCLQFGSH 183
Query: 176 ARCL 179
R +
Sbjct: 184 VRIM 187
>gi|242085290|ref|XP_002443070.1| hypothetical protein SORBIDRAFT_08g007580 [Sorghum bicolor]
gi|241943763|gb|EES16908.1| hypothetical protein SORBIDRAFT_08g007580 [Sorghum bicolor]
Length = 579
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 159/336 (47%), Gaps = 73/336 (21%)
Query: 32 LPADLFDILLTCLPPLALQKLQTKMPFRDGDDCGSPDYCFENGRKRGRYGNFNTVWKKLF 91
LP +L L + LPP+AL+ L R +F+T W+ LF
Sbjct: 75 LPWELLHRLASRLPPVALESLHHA--------------------AHARCEDFSTTWQLLF 114
Query: 92 KTRW---SGFTDQIEPVDWQQRYWEAHVQGCLDEAAELVVLPSFRGLISDINISDTILNY 148
K RW + + + VDWQQ+YWE H+Q CLDEAAE LPSF G + +++ S I+N
Sbjct: 115 KLRWPLDNAGHNNLGTVDWQQKYWEKHLQECLDEAAESAFLPSFCGSVGELSTSAKIMNS 174
Query: 149 IGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEETCQLLRESKLQSLVLRWIR 208
I Q M+ + +S+L Y C +FG Y RCLRLQ LC ET
Sbjct: 175 I--YQSMD-TSQHHSRLEYQCSKFGCYVRCLRLQGVLCNAET------------------ 213
Query: 209 FEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISS 268
L P+ ++ ICRSLC + H I+ SI S
Sbjct: 214 ---------------------------SLYPTVMDKICRSLCQEGSS-HGIQRFSIKSSQ 245
Query: 269 FIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGN 328
E P ++ L++FLSSG+SL L L + +M+ +LLE+S L L++S N
Sbjct: 246 ICETKPLTISSGLLNFLSSGKSLHLLSLNDTKMQSSLAQMIIHTLLESSCDLHTLEISEN 305
Query: 329 SIGGWLSKYDRSGP-LFSLGAGKSLQSLRLLNLRYD 363
+I GWLSK ++S +L + + SL +LNLR +
Sbjct: 306 NIAGWLSKLNKSSTNSLALRSDIFMNSLSILNLREN 341
>gi|242085292|ref|XP_002443071.1| hypothetical protein SORBIDRAFT_08g007590 [Sorghum bicolor]
gi|241943764|gb|EES16909.1| hypothetical protein SORBIDRAFT_08g007590 [Sorghum bicolor]
Length = 606
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 171/350 (48%), Gaps = 75/350 (21%)
Query: 32 LPADLFDILLTCLPPLALQKLQ--------------TKMPFRDGDDCGSPDYCFENGRKR 77
LP +L L + LPP+AL+ L + + +DGD G KR
Sbjct: 76 LPWELLHRLASRLPPVALESLHHAAHARCCSSAKTTSGLGLQDGD---------RRGMKR 126
Query: 78 GRYGNFNTVWKKLFKTRW---SGFTDQIEPVDWQQRYWEAHVQGCLDEAAELVVLPSFRG 134
R +F+T W+ LFK RW + + + VDWQQ+YWE H+Q CLDEAAE LPSF G
Sbjct: 127 SRCEDFSTTWQLLFKLRWPLDNAGHNNLGTVDWQQKYWEKHLQECLDEAAESAFLPSFCG 186
Query: 135 LISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEETCQLL 194
I +++IS L Y C + RCLRLQ LC ET LL
Sbjct: 187 NIGELSIS---------------------VLQYQCCPL--FFRCLRLQGVLCNAETSDLL 223
Query: 195 RESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRK 254
++ KL+ L+ +IR +I + E L P+ ++ ICRSLC +
Sbjct: 224 QQCKLERLM--FIR-----------IISDPE-----------LYPTIMDKICRSLCQEGS 259
Query: 255 RIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLL 314
H I+ SI S E P ++ L++FLSSG+SL L L + +M+ +LL
Sbjct: 260 S-HGIQRFSIKSSQICETKPLTISSGLLNFLSSGKSLHLLSLNDTKMQSSLAQMIIHTLL 318
Query: 315 EASSSLSILDLSGNSIGGWLSKYDRSGP-LFSLGAGKSLQSLRLLNLRYD 363
E+S L L++S N+I GWLSK ++S +L + + SL +LNLR +
Sbjct: 319 ESSCDLHTLEISENNIAGWLSKLNKSSTNSLALRSDIFMNSLSILNLREN 368
>gi|224132300|ref|XP_002321305.1| predicted protein [Populus trichocarpa]
gi|222862078|gb|EEE99620.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 100/142 (70%), Gaps = 4/142 (2%)
Query: 3 KAPSLISLAALAVKRELLLGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFRDGD 62
K PSLISL A+KRE++ DDV P +Y+LP+ LF+ LLT LPPLAL KL+T MPF+D +
Sbjct: 1 KVPSLISLVIEAIKREVVHDDDVRPDIYDLPSHLFNRLLTKLPPLALHKLETDMPFKDCN 60
Query: 63 DCGSPDYCFENGRKRGR-YGNFNTVWKKLFKTRWSG-FTDQIEPVDWQQRYWEAHVQGCL 120
D +P + GRKRGR GNF++ WK LFK RW F +DW++ YW+ H+Q CL
Sbjct: 61 DYEAP--LNDGGRKRGRSNGNFDSAWKALFKLRWPDPFHPSETQLDWRRIYWQTHLQNCL 118
Query: 121 DEAAELVVLPSFRGLISDINIS 142
DEAAEL +LPSF G I ++N+S
Sbjct: 119 DEAAELALLPSFDGCIGEMNVS 140
>gi|414877692|tpg|DAA54823.1| TPA: hypothetical protein ZEAMMB73_514735 [Zea mays]
Length = 271
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 102/185 (55%), Gaps = 19/185 (10%)
Query: 32 LPADLFDILLTCLPPLALQKLQTKMPFRDGDDCGSPDYCFENGRKRG----RYGNFNTVW 87
LP +L L + LPP+ L+ L R + ++G +RG R +FN+ W
Sbjct: 76 LPWELLHRLASRLPPVVLESLHHAAHARYCSAETTSGLGVQDGERRGVKRSRCEDFNSTW 135
Query: 88 KKLFKTRW--SGFT--DQIEPVDWQQRYWEAHVQGCLDEAAELVVLPSFRGLISDINISD 143
+ LFK RW G T + + VDWQQ+YWE H+Q CL+EAAE LP F G I +++IS
Sbjct: 136 QLLFKLRWPLGGNTGHNNLVTVDWQQKYWEKHLQECLNEAAEHAFLPFFCGSIGELSISA 195
Query: 144 TILNYI----GYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEETCQLLRESKL 199
I+N I G QQ +S+L+Y C +FG Y R LRLQ LC ET LL++ KL
Sbjct: 196 KIMNSIYQSMGTSQQ-------HSRLAYQCSKFGCYVRSLRLQGVLCTAETYVLLQQCKL 248
Query: 200 QSLVL 204
+ L+
Sbjct: 249 ERLMF 253
>gi|357510357|ref|XP_003625467.1| hypothetical protein MTR_7g099450 [Medicago truncatula]
gi|355500482|gb|AES81685.1| hypothetical protein MTR_7g099450 [Medicago truncatula]
Length = 602
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 98/174 (56%), Gaps = 20/174 (11%)
Query: 172 FGHYARCLRLQNALCVEETC----------QLLRESKLQSLVLRWIRFEEHVQALCKLLI 221
F Y RC CV T +LLRE KLQS+V+R IR E V LC+L+
Sbjct: 49 FVGYGRCGSSPRHTCVVTTVNRHTTAMYSLRLLRECKLQSMVVRCIRSVEQVNGLCRLIN 108
Query: 222 QNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHK-------IENLSIDISSFIENCP 274
Q+S TL SLEF+HC L +F+ + S+ RK +HK +++LSI SSF C
Sbjct: 109 QHSRTLTSLEFIHCTLYENFLNTLLDSVV--RKSVHKYALQKHGLQHLSIVSSSF-GPCT 165
Query: 275 SSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGN 328
S+ L S LSS RS+CSLKL L R+F + +F +LL SS +S+LDL+ N
Sbjct: 166 GSLPTGLQSLLSSARSMCSLKLCGSRLGRNFAKALFVTLLSVSSCISVLDLAEN 219
>gi|302761978|ref|XP_002964411.1| hypothetical protein SELMODRAFT_405633 [Selaginella moellendorffii]
gi|300168140|gb|EFJ34744.1| hypothetical protein SELMODRAFT_405633 [Selaginella moellendorffii]
Length = 572
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 8/193 (4%)
Query: 78 GRYG-NFNTVWKKLFKTRWSGFTDQIEPVDWQQRYWEAHVQGCLDEAAELVVLPSFRGLI 136
G+Y F+ WK L + + ++ W+ YWEAHVQ CL+ + P+F G I
Sbjct: 60 GQYEEGFSLAWKSLAECHHNTL---LKHGTWKDAYWEAHVQACLNAVTTKLAAPNFDGQI 116
Query: 137 SDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEETCQLLRE 196
D+ + + ++ IG D++ L Y + LRL++ LC E L
Sbjct: 117 GDLLVPEALVYRIGARNAACCEDSDFTSLKNTIPLLSRYVKSLRLRSVLCSSELLSLFDS 176
Query: 197 SKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRI 256
++L SL I+ + LL +N L LEF +CK F E +L K
Sbjct: 177 AELASLSFLNIKTSTQFGLIINLLARNVRALRRLEFHYCK----FFEQDFNTLLGMLKSA 232
Query: 257 HKIENLSIDISSF 269
+ + +I SS
Sbjct: 233 DVLSDFAITCSSI 245
>gi|167523206|ref|XP_001745940.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775741|gb|EDQ89364.1| predicted protein [Monosiga brevicollis MX1]
Length = 1034
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 27/159 (16%)
Query: 211 EHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFI 270
+ V + LL+ N E + F HC+LSP +C +L S+ RI +++ F
Sbjct: 841 DDVSSFQNLLMSNRE----VNFFHCRLSPHQFTELCLALESRSCRIQQLK-------LFD 889
Query: 271 ENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSI 330
N SS V+ LV L RS+ L++R+ L+ + + +L+++ +L +L L N I
Sbjct: 890 NNLASSQVLRLVDALKKNRSVTHLQIRNNELNNEAADR-LARMLQSNETLQMLSLRANRI 948
Query: 331 GG----WLSKYDRSGPLFSLGAGKSLQSLRLLNLRYDMI 365
WL++ R+ ++LR L+LR +MI
Sbjct: 949 SNEGATWLAEGLRTN-----------RTLRGLSLRENMI 976
>gi|403337402|gb|EJY67914.1| hypothetical protein OXYTRI_11572 [Oxytricha trifallax]
Length = 327
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 151 YEQQMNHLACDYSKLSYHCQQFG----------HYARCLRLQNALCVEETCQLLRESKLQ 200
Y ++ N L CD SK+ + H + Q E + + +
Sbjct: 29 YRKKCNELQCDMSKIIKEKYEEYQEEGEPITKFHIWEEMGWQGVRAFTEALKQVNYPHCR 88
Query: 201 SLVLRWIRF--EEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHK 258
S+ L W + +E V+A+C+ +Q ++ ++ LE L K++ E I ++L H
Sbjct: 89 SIRL-WKTYCEDEGVRAVCQ-FVQQAKAVSVLELLDNKITKLGCEFIGKTL-------HP 139
Query: 259 IENLSIDISSFIEN-CPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEAS 317
N +I I N V LV L+ +SL +L L +C +D R +F L+ +
Sbjct: 140 RANGNIQILKLDHNDIGGQGVQALVEGLAINKSLVTLSLTYCDIDHTGARALFELLIYSQ 199
Query: 318 SSLSILDLSGNSI 330
S L L+LSGN +
Sbjct: 200 SGLEELNLSGNHL 212
>gi|330842768|ref|XP_003293343.1| hypothetical protein DICPUDRAFT_158160 [Dictyostelium purpureum]
gi|325076341|gb|EGC30135.1| hypothetical protein DICPUDRAFT_158160 [Dictyostelium purpureum]
Length = 619
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 180 RLQNALCVEETCQLLRESKLQSLVLRWIRF-EEHVQALCKLLIQNSETLASLEFLHCKLS 238
R+ N +E L+ + +LVL F ++ V AL K L +NS TL SL ++ L+
Sbjct: 395 RITNEGGIELANSLVDNKSISTLVLNNNTFSKDTVVALAKTLEKNS-TLTSLSLVNNSLT 453
Query: 239 PSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRH 298
VE + +SL + K + KI+ N S E +S S+ L L +
Sbjct: 454 IDGVEDLFKSLSTSNKTLIKID--------LTNNLLGSQGGETISKYIPKCSISELILTN 505
Query: 299 CHLDRDFGRMVFSSLLEASSSLSILDLSGNSIG 331
L+ + +++ +SS+ LD+S NSIG
Sbjct: 506 NQLETQGASSILNAV-ATNSSIQTLDISNNSIG 537
>gi|348677311|gb|EGZ17128.1| hypothetical protein PHYSODRAFT_264315 [Phytophthora sojae]
Length = 388
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 125/309 (40%), Gaps = 51/309 (16%)
Query: 44 LPPLALQKLQTKMPFRDGDDC-GSPDYCFENGRKRGRYGNFNTVWKK--LFKTRWSGFTD 100
+P L ++ ++P D D C +P+ EN WK+ L KT+W
Sbjct: 19 VPRQFLPEVMARLPL-DLDVCVTAPNVTDEN------------YWKRCCLSKTQWKNIQI 65
Query: 101 QIEPVDWQQRYWEAHVQGCLDEAAELVVLPSFRGLISDINISDTILNYIGYEQQMNHLAC 160
+ W+Q + E H+Q L++ L L++ + S + + +Q ++HL
Sbjct: 66 ADHGLTWKQLFLEKHLQDLLEDFDP--SLDDHDHLMAVVKASSEYIFTLEIDQLLSHLDL 123
Query: 161 DYS----------KLSYHCQQFG-HYARCLRLQNALCVEETCQLLRESKLQSLVLRWIRF 209
+ +++Y +Q G Y R L +++ S SL W+
Sbjct: 124 NEICAQLRNLTRLRVTYGVKQIGMKYERMLFGMKISDATNLSHIIKSS--NSLTTLWLPS 181
Query: 210 EEHVQALCKLLIQ---NSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDI 266
L ++L+ + ++ SL+ H KL+ + + L + +
Sbjct: 182 NLLDDDLLRMLMTGLVKNTSITSLDLSHNKLTNHGARLLSKLLGPE------------SV 229
Query: 267 SSFIENCPSSVVVELVSFLSSG----RSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSI 322
+ ++ C + + E +LS G SL L LR L D GRM+ L+E +SL+
Sbjct: 230 ITTLKLCDNQIHAEGGRYLSRGLKYNTSLVELDLRLNRLTDDGGRMLLEGLVE-HTSLTN 288
Query: 323 LDLSGNSIG 331
L+LS N +G
Sbjct: 289 LNLSSNMLG 297
>gi|390351266|ref|XP_003727622.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Strongylocentrotus purpuratus]
Length = 879
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 213 VQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISS-FIE 271
+Q L L + +++ L +LE + + +E I SLC+ I +E +++ + S F++
Sbjct: 376 LQNLTFLDMHSNKFLTTLE-MASFMGLEQIETINLSLCN----IVNVELVTLSLKSLFLK 430
Query: 272 NCPSSVVVELVSFLSSGRSLCSLKLRHCHLD--RDFGRMVFSSLLEASSSLSILDLSGNS 329
N P+ ++ + SF S +SL L LR LD R + SL + SL+ LDLS NS
Sbjct: 431 NNPTMFLMPVTSF-ESLQSLVYLNLRKTGLDSIRLWNFFTNISLFDGLFSLTTLDLSENS 489
Query: 330 IGGWLSKYDRSGP--------------------LFSLGAGKSLQSLRLLNLRYDMIGNAV 369
IG D P + A ++L+ LR+LNLR GN +
Sbjct: 490 IGSIYDSADYLSPWVFKPLSALQNLSLEDCQISFLNPLAFEALKFLRVLNLR----GNKI 545
Query: 370 SLLLCKLF 377
L +F
Sbjct: 546 KQLSIDIF 553
>gi|183178960|gb|ACC43968.1| FBox-LRR protein [Philodina roseola]
Length = 594
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 179 LRL-QNALCVEETCQLLRESKLQSLVLRWIRF-EEHVQA-----LCKLLIQNSETLASLE 231
LRL N E T L K+ L+ IR E HV A L +L+ N +TL +LE
Sbjct: 112 LRLNHNDFGAEGTKYLFNALKINQ-TLKTIRLSENHVNADAAQCLADVLLSN-QTLNTLE 169
Query: 232 FLHCKLSPSFVEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSL 291
+C L+ + + + +L R S+D+ + + V L L ++L
Sbjct: 170 LYYCYLNATVFKYLATALKVNRTLT------SLDLG--LNEQGNEGVKYLADALKVNQTL 221
Query: 292 CSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKY-------DRSGPLF 344
+L L +DR+ + + SL + +S LS L L NSIG KY +R+
Sbjct: 222 MTLDLYANRIDREGAKYLADSL-KVNSVLSTLKLYSNSIGAEGMKYLADALKTNRALATL 280
Query: 345 SLGAGK 350
+LG+ K
Sbjct: 281 TLGSNK 286
>gi|405975326|gb|EKC39900.1| hypothetical protein CGI_10016632 [Crassostrea gigas]
Length = 601
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 85/181 (46%), Gaps = 27/181 (14%)
Query: 187 VEETCQ-LLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEF----LHCKLSPSF 241
E+ C+ LL+ S ++ L L +FEE + ++ N+ETL +++ L + + +
Sbjct: 274 AEKLCRVLLKNSSIKHLYLANNKFEERAAGWLREVLTNNETLETVDLSWNHLRTRGAIAI 333
Query: 242 VEGICRSLCSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHL 301
EG+ + + + L++ ++ F ++ + + L + R+L L L H +
Sbjct: 334 AEGVQEN--------YGLRILNLAMNGFAQDGSEA----MGKALKNNRTLLELDLSHNRI 381
Query: 302 DRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGP--LFSLGAGKSLQSLRLLN 359
+ G S L+ + +L +L ++ N +GG GP L ++ A + +R+L+
Sbjct: 382 -PEAGATAISQGLQHNDTLKVLRVASNPLGG-------EGPLELLNVIAKNDMSEIRVLD 433
Query: 360 L 360
L
Sbjct: 434 L 434
>gi|403288309|ref|XP_003935350.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform
4 [Saimiri boliviensis boliviensis]
Length = 1008
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 257 HKIENLSIDISSFIENCPSSVVVELVSFLSSGR-SLCSLKLRHCHLDRDFGRMVFSSLLE 315
H++E+LS+ F+ N P ++ + G CSL L + HL F R +FS +L
Sbjct: 675 HRVESLSL---GFLHNMPKEEEEDMAQGVPPGSLPACSLGLVNSHLTSSFCRGLFS-VLS 730
Query: 316 ASSSLSILDLSGNSIG 331
+ SL+ LDLS NS+G
Sbjct: 731 TNQSLTELDLSDNSLG 746
>gi|344923498|ref|ZP_08776959.1| hypothetical protein COdytL_02475 [Candidatus Odyssella
thessalonicensis L13]
Length = 576
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 13/136 (9%)
Query: 198 KLQSLVLRWIRF-EEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRI 256
KL SL L+ + + V A+ ++L N +L SL H ++SP VE + +L + +
Sbjct: 289 KLTSLTLKTNKLGDSGVMAIAEMLTTN-HSLVSLTLEHNEISPQGVEALVTALVTNKHLT 347
Query: 257 HKIENLSIDIS-SFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLE 315
+D+S + I N + + L+ + ++ +L+L C L + G M S+ L
Sbjct: 348 L------LDLSRNKINNQGAEALAMLIQ---NNATIKALELGRCGLTGE-GIMSISASLR 397
Query: 316 ASSSLSILDLSGNSIG 331
++SSL+ L+L+ NSIG
Sbjct: 398 SNSSLTKLNLNHNSIG 413
>gi|403288303|ref|XP_003935347.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform
1 [Saimiri boliviensis boliviensis]
Length = 1028
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 257 HKIENLSIDISSFIENCPSSVVVELVSFLSSGR-SLCSLKLRHCHLDRDFGRMVFSSLLE 315
H++E+LS+ F+ N P ++ + G CSL L + HL F R +FS +L
Sbjct: 675 HRVESLSL---GFLHNMPKEEEEDMAQGVPPGSLPACSLGLVNSHLTSSFCRGLFS-VLS 730
Query: 316 ASSSLSILDLSGNSIG 331
+ SL+ LDLS NS+G
Sbjct: 731 TNQSLTELDLSDNSLG 746
>gi|440804279|gb|ELR25156.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 865
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 23/150 (15%)
Query: 197 SKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRI 256
+ L SL L R E+ LLI++S L+ L CK SP+ + I L RI
Sbjct: 379 NTLTSLNLAHNRLEKIGAQAIGLLIESSSCLSVLNLAFCKASPADISTILAPLAGN-NRI 437
Query: 257 HKIENLSIDIS------------SFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRD 304
H +L +D+S + + +CP +V L ++ +L LR L D
Sbjct: 438 H---DLILDLSGNDLGSTGAQHLAKVTSCPLAVSYGLTGI----DNIHTLILRENRLKDD 490
Query: 305 FGRMVFSSLLEASSSLSILDLSGN--SIGG 332
R+V S+L++ SL +DLS N IGG
Sbjct: 491 GLRLVVSALMQ-KKSLKCVDLSYNIAKIGG 519
>gi|440632262|gb|ELR02181.1| hypothetical protein GMDG_00974 [Geomyces destructans 20631-21]
Length = 1169
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 198 KLQSLVLRWIRFEEHV-QALCKLLIQN-SETLASLEFLHCKLSPSFVEGICRSLC----- 250
KLQ LVL + + A+ L + SE+L L+ C L+ + V + R++C
Sbjct: 743 KLQELVLTGVPINDQTLDAISTYLHSDMSESLHLLQMDQCNLTGTQVAVLMRTMCHVPGE 802
Query: 251 SKRKRIH----KIENLSIDISSFIENC--PSSVVVELVSFLSSGR------------SLC 292
+ ++H ++E + DI+S I++C PS V + +V + S ++
Sbjct: 803 GRDMQLHISANRLEKGNSDIASAIKDCLTPSHVTMRMVEYQSEAHFRQLLEALRENTTIK 862
Query: 293 SLKLRHCHLDRDFGR---MVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAG 349
L + L D G + + E +S+L LD+SG ++++ G +L
Sbjct: 863 CLDISKASLPYDAGEDTCIALQRVFEENSTLEELDISGEYAHLEIARFG-IGLNHALTGL 921
Query: 350 KSLQSLRLLNLRYDMIG 366
K +L++L L Y +G
Sbjct: 922 KKNNALKVLKLEYQNLG 938
>gi|442762035|gb|JAA73176.1| Putative nlr family card domain protein, partial [Ixodes ricinus]
Length = 704
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 32/207 (15%)
Query: 186 CVEETCQLLRESKLQSLVLRWIRFE-EHVQALCKLLIQNSETLASLEFLHCKLSPSFVEG 244
CVE QLL SKL + L + E + + +I+N+ L+ L + KL VE
Sbjct: 174 CVESFVQLLERSKLCVVELNNVDMSTEPASRVMQSMIENASELSFLRIMFSKLCNPVVES 233
Query: 245 ICRSL----CS------------KRKRIHKI-----ENLSIDISSFIE-NCPSSVVVELV 282
I + L C R +I I N S+ I +F+ P+ + V L+
Sbjct: 234 IAKLLRGTKCVLVELSFHNMKEFTRTQIKTIVSAISHNQSLKIFNFLSIPLPTDLGVLLM 293
Query: 283 SFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSLSILDLSGNSIGGWLSKYDRSGP 342
L +S+ +L+L C +D F+ +L+ + L + LS N I D + P
Sbjct: 294 HALCINKSIVTLRLVDCKIDSKVA-CAFADVLQTNHVLRNVVLSSNEID------DEAAP 346
Query: 343 LF--SLGAGKSLQSLRLLNLRYDMIGN 367
SL ++L L L N ++ IG+
Sbjct: 347 YVAESLRHNQTLSRLFLDNNKFSTIGD 373
>gi|66821673|ref|XP_644281.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
AX4]
gi|60472031|gb|EAL69984.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
AX4]
Length = 880
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 146 LNYIGYEQQM---NHLACDYSKLSYHCQQFGHYARCLRLQNALCVEETCQLLRESKLQSL 202
LNYI + + N LA + + S H + + ++ + T +L E L +
Sbjct: 560 LNYINGQTAIMLGNSLAHNSTLKSVHLDHIDDQSGAVFFES--LGKSTTTVLNELNLSNC 617
Query: 203 VLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSL--CSKRKRIHKIE 260
L E + K L + + TL + F KL S + I R+L S R++ +
Sbjct: 618 QLESASASE----ISKTLSKKTSTLVDINFKSNKLGVSLI-SIARALEVNSTITRLNLSD 672
Query: 261 NLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMVFSSLLEASSSL 320
N D S E L LS+ +++ +L L L F + +L ++ SL
Sbjct: 673 NRIFDTSGGWE---------LADALSNNKTITALSLSTNSLGNGFAEGIARALNSSTCSL 723
Query: 321 SILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNL 360
LD+SGN I D +G + A + ++L+LLN+
Sbjct: 724 KSLDISGNQI-------DYAGAKYIAEALSNNKTLKLLNM 756
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,990,713,744
Number of Sequences: 23463169
Number of extensions: 243396283
Number of successful extensions: 695395
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 695203
Number of HSP's gapped (non-prelim): 166
length of query: 387
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 243
effective length of database: 8,980,499,031
effective search space: 2182261264533
effective search space used: 2182261264533
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)