BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>016572
MLQMQCLNLAPKFNPLQSPGCSRKFASPIVTQRHKSSIKCSSQSSFSFPNQNKISHNNNK
PPCKPLVPLALQDGHALQQSEDDNKPAAAPSFLEVVKRKLNAISHVTRYYAQINIIVSVT
SVCFLPVQSLSQVTPAFLLGVLKAVVAQIFMNISLCSLNQICDVEIDKINKPYLPLASGE
LSMGTGIAICAGSALLSLALAFLSGSPAVLCAVIAWGLTGAAYSVPLPFLRWKSHTFMAP
FTLVILMGLILQIPYFIHSQTYLLGKPFEVTGPFVFATAIMSIYAFVNGLLKDLPDVEGD
KAFGMQTLCVLLGKEKVLPLCVNMMLLGYGGAVVAGATSTLMISKLVTIIGHIILALMMW
LRSRKVDLDNFDSQFGFYMFLWQASDY

High Scoring Gene Products

Symbol, full name Information P value
HPT1
homogentisate phytyltransferase 1
protein from Arabidopsis thaliana 2.8e-57
N8DT-1
Naringenin 8-dimethylallyltransferase 1, chloroplastic
protein from Sophora flavescens 6.0e-48
SfN8DT-2
Naringenin 8-dimethylallyltransferase
protein from Sophora flavescens 4.2e-47
HST
homogentisate prenyltransferase
protein from Arabidopsis thaliana 2.2e-25
G4 protein from Arabidopsis thaliana 0.00030

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  016572
        (387 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044440 - symbol:HPT1 "homogentisate phytyltra...   589  2.8e-57   1
UNIPROTKB|B1B3P3 - symbol:N8DT-1 "Naringenin 8-dimethylal...   501  6.0e-48   1
UNIPROTKB|B1B5P4 - symbol:SfN8DT-2 "Naringenin 8-dimethyl...   493  4.2e-47   1
TAIR|locus:4010713740 - symbol:HST "homogentisate prenylt...   288  2.2e-25   1
TAIR|locus:2074393 - symbol:G4 species:3702 "Arabidopsis ...   118  0.00030   1


>TAIR|locus:2044440 [details] [associations]
            symbol:HPT1 "homogentisate phytyltransferase 1"
            species:3702 "Arabidopsis thaliana" [GO:0004659 "prenyltransferase
            activity" evidence=IEA;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0010189 "vitamin E biosynthetic process"
            evidence=IMP;TAS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISS] [GO:0010176 "homogentisate
            phytyltransferase activity" evidence=IMP;IDA] [GO:0042362
            "fat-soluble vitamin biosynthetic process" evidence=TAS]
            [GO:0009266 "response to temperature stimulus" evidence=IMP]
            [GO:0009915 "phloem sucrose loading" evidence=IMP] [GO:0031347
            "regulation of defense response" evidence=IMP] [GO:0006636
            "unsaturated fatty acid biosynthetic process" evidence=RCA;IMP]
            [GO:0071555 "cell wall organization" evidence=IMP] [GO:0000096
            "sulfur amino acid metabolic process" evidence=RCA] [GO:0006546
            "glycine catabolic process" evidence=RCA] [GO:0006733
            "oxidoreduction coenzyme metabolic process" evidence=RCA]
            [GO:0006766 "vitamin metabolic process" evidence=RCA] [GO:0008652
            "cellular amino acid biosynthetic process" evidence=RCA]
            [GO:0009072 "aromatic amino acid family metabolic process"
            evidence=RCA] [GO:0009106 "lipoate metabolic process" evidence=RCA]
            [GO:0009108 "coenzyme biosynthetic process" evidence=RCA]
            [GO:0009117 "nucleotide metabolic process" evidence=RCA]
            [GO:0009416 "response to light stimulus" evidence=RCA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
            "leaf morphogenesis" evidence=RCA] [GO:0015994 "chlorophyll
            metabolic process" evidence=RCA] [GO:0019216 "regulation of lipid
            metabolic process" evidence=RCA] [GO:0019288 "isopentenyl
            diphosphate biosynthetic process, mevalonate-independent pathway"
            evidence=RCA] [GO:0019748 "secondary metabolic process"
            evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
            [GO:0031408 "oxylipin biosynthetic process" evidence=RCA]
            [GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR000537 Pfam:PF01040 UniPathway:UPA00160
            GO:GO:0016021 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006636 EMBL:AC003673 GO:GO:0071555 GO:GO:0009535
            GO:GO:0009266 GO:GO:0009915 GO:GO:0031347 eggNOG:COG0382
            GO:GO:0010189 EMBL:AF324344 EMBL:AY089963 EMBL:GU198365
            EMBL:AY063893 EMBL:AY113993 IPI:IPI00546170 PIR:T01623
            RefSeq:NP_849984.1 UniGene:At.27152 STRING:Q8VWJ1 PRIDE:Q8VWJ1
            GeneID:816412 KEGG:ath:AT2G18950 TAIR:At2g18950
            HOGENOM:HOG000264578 InParanoid:Q8VWJ1 KO:K09833 OMA:YQFIWKL
            PhylomeDB:Q8VWJ1 ProtClustDB:PLN02878 Genevestigator:Q8VWJ1
            GO:GO:0010176 Uniprot:Q8VWJ1
        Length = 393

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 112/284 (39%), Positives = 172/284 (60%)

Query:   100 LNAISHVTRYYAQINIIVSVTSVCFLPVQSLSQVTPAFLLGVLKAVVAQIFMNISLCSLN 159
             L+A    +R +  I  ++S+ SV FL V+ +S ++P    G+L+AVVA + MNI +  LN
Sbjct:    97 LDAFYRFSRPHTVIGTVLSILSVSFLAVEKVSDISPLLFTGILEAVVAALMMNIYIVGLN 156

Query:   160 QICDVEIDKINKPYLPLASGELSMGTGIAICXXXXXXXXXXXXXXXXPAVLCAVIAWGLT 219
             Q+ DVEIDK+NKPYLPLASGE S+ TGIAI                   +  A+    + 
Sbjct:   157 QLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSIMSFWLGWIVGSWPLFWALFVSFML 216

Query:   220 GAAYSVPLPFLRWKSHTFMAPFTLVILMGLILQIPYFIHSQTYLLGKPFEVTGPFVFATA 279
             G AYS+ LP LRWK    +A   ++ +  +I+QI +++H QT++ G+P   T P +FATA
Sbjct:   217 GTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATA 276

Query:   280 IMSIYAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNMMLLGYXXXXXXXXTS 339
              MS ++ V  L KD+PD+EGDK FG+++  V LG+++V   CV ++ + Y        TS
Sbjct:   277 FMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATS 336

Query:   340 TLMISKLVTIIGHIILALMMWLRSRKVDLDNFDSQFGFYMFLWQ 383
               + SK+++++GH+ILA  +W R++ VDL +       YMF+W+
Sbjct:   337 PFIWSKVISVVGHVILATTLWARAKSVDLSSKTEITSCYMFIWK 380


>UNIPROTKB|B1B3P3 [details] [associations]
            symbol:N8DT-1 "Naringenin 8-dimethylallyltransferase 1,
            chloroplastic" species:49840 "Sophora flavescens" [GO:0004659
            "prenyltransferase activity" evidence=IDA] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 GO:GO:0009507 GO:GO:0031969 GO:GO:0004659
            EMBL:AB325579 BioCyc:MetaCyc:MONOMER-16837 Uniprot:B1B3P3
        Length = 410

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 111/334 (33%), Positives = 177/334 (52%)

Query:    50 NQNKISHNNNKPPCKPLVPLALQDGHALQQSEDDNKPAAAPSFLEVVKRKLNAISHVTRY 109
             N+   + N +K   K  V  A+ +    Q  E + +     S  + V   L+      R 
Sbjct:    68 NEGGSTSNTSKECEKKYVVNAISE----QSFEYEPQTRDPESIWDSVNDALDIFYKFCRP 123

Query:   110 YAQINIIVSVTSVCFLPVQSLSQVTPAFLLGVLKAVVAQIFMNISLCSLNQICDVEIDKI 169
             YA   I++  T    + V+ LS ++ AF +G L+ VVA I ++I    LNQ+CD+EIDKI
Sbjct:   124 YAMFTIVLGATFKSLVAVEKLSDLSLAFFIGWLQVVVAVICIHIFGVGLNQLCDIEIDKI 183

Query:   170 NKPYLPLASGELSMGTGIAICXXXXXXXXXXXXXXXXPAVLCAVIAWGLTGAAYSVPLPF 229
             NKP LPLASG+LS    + I                   +   V    +  +AY+V LP 
Sbjct:   184 NKPDLPLASGKLSFRNVVIITASSLILGLGFAWIVDSWPLFWTVFISCMVASAYNVDLPL 243

Query:   230 LRWKSHTFMAPFTLVILMGLILQIPYFIHSQTYLLGKPFEVTGPFVFATAIMSIYAFVNG 289
             LRWK +  +     +  + +   + +F+H QT +  +P     P +F TAI+SIYA V  
Sbjct:   244 LRWKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTAIVSIYAIVIA 303

Query:   290 LLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNMMLLGYXXXXXXXXTSTLMISKLVTI 349
             L KD+PD+EGD+ FG+Q+L + LG ++V  +CV+++ + Y        TS ++ SK++T+
Sbjct:   304 LFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICVSLLEMTYGVTILVGATSPILWSKIITV 363

Query:   350 IGHIILALMMWLRSRKVDLDNFDSQFGFYMFLWQ 383
             +GH +LA ++W  ++ VDL +      FYMF+W+
Sbjct:   364 LGHAVLASVLWYHAKSVDLTSNVVLHSFYMFIWK 397


>UNIPROTKB|B1B5P4 [details] [associations]
            symbol:SfN8DT-2 "Naringenin 8-dimethylallyltransferase"
            species:49840 "Sophora flavescens" [GO:0004659 "prenyltransferase
            activity" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR000537 Pfam:PF01040 GO:GO:0016021 GO:GO:0009507
            GO:GO:0004659 EMBL:AB370330 BioCyc:MetaCyc:MONOMER-16838
            Uniprot:B1B5P4
        Length = 407

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 102/288 (35%), Positives = 160/288 (55%)

Query:    96 VKRKLNAISHVTRYYAQINIIVSVTSVCFLPVQSLSQVTPAFLLGVLKAVVAQIFMNISL 155
             V   L+      R YA  ++++  T    + V+ LS ++ AF +G L+ VVA I ++I  
Sbjct:   107 VNDALDTFYKFCRPYAIFSVVLGATFKSLVAVERLSDLSLAFFIGWLQVVVAVICIHIFD 166

Query:   156 CSLNQICDVEIDKINKPYLPLASGELSMGTGIAICXXXXXXXXXXXXXXXXPAVLCAVIA 215
               LNQ+CD+EIDKINKP LPLASG LS    + I                   +   V  
Sbjct:   167 VGLNQLCDIEIDKINKPDLPLASGNLSFRNVVIITASSLILGLGFAWIVGSWPLFWTVFI 226

Query:   216 WGLTGAAYSVPLPFLRWKSHTFMAPFTLVILMGLILQIPYFIHSQTYLLGKPFEVTGPFV 275
               +  AAY+V LP LRWK +  +   + +  + +   + +F+H QT +  +P     P +
Sbjct:   227 CCMFAAAYNVDLPLLRWKKYPVLTAISFIANVAVTRSLGFFLHMQTCVFKRPTTFPRPLI 286

Query:   276 FATAIMSIYAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCVNMMLLGYXXXXXX 335
             F TAI+SIYA V  L KD+PD+EGD+ FG+Q+L + LG ++V  +CV+++ + Y      
Sbjct:   287 FCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICVSLLEMAYGVTILV 346

Query:   336 XXTSTLMISKLVTIIGHIILALMMWLRSRKVDLDNFDSQFGFYMFLWQ 383
               TS ++ SK++T++GH ILA ++W  ++  DL +      FYMF+W+
Sbjct:   347 GATSPILWSKIITVLGHAILASVLWYHAKSTDLTSNVVLQSFYMFIWK 394


>TAIR|locus:4010713740 [details] [associations]
            symbol:HST "homogentisate prenyltransferase"
            species:3702 "Arabidopsis thaliana" [GO:0004161
            "dimethylallyltranstransferase activity" evidence=NAS] [GO:0004659
            "prenyltransferase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0010236 "plastoquinone biosynthetic process"
            evidence=IMP] [GO:0010355 "homogentisate farnesyltransferase
            activity" evidence=IDA] [GO:0010356 "homogentisate
            geranylgeranyltransferase activity" evidence=IDA] [GO:0010357
            "homogentisate solanesyltransferase activity" evidence=IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] [GO:0016117 "carotenoid biosynthetic
            process" evidence=IMP] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 EMBL:CP002686 GO:GO:0009941 GO:GO:0016117
            GO:GO:0010236 IPI:IPI00938788 RefSeq:NP_001154609.1
            UniGene:At.71046 PRIDE:F4J8K0 EnsemblPlants:AT3G11945.2
            GeneID:5007993 KEGG:ath:AT3G11945 KO:K12501 OMA:TIYSVPP
            GO:GO:0010355 GO:GO:0010356 GO:GO:0010357 Uniprot:F4J8K0
        Length = 393

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 74/250 (29%), Positives = 123/250 (49%)

Query:   136 AFLLGVLKAVVAQIFMNISLCSLNQICDVEIDKINKPYLPLASGELSMGTGIAICXXXXX 195
             + +L  L  ++A I  N  +  +NQI D+ IDK+NKPYLP+A+G+LS+ +   +      
Sbjct:   135 SLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAI 194

Query:   196 XXXXXXXXXXXPAVLCAVIAWGL-TGAAYSVPLPFLRWKSHTFMAPFTLVILMGLILQIP 254
                        P +  ++ + GL  G  YSVP P LR K     A   +  + G +L   
Sbjct:   195 AGLLVVGFNFGPFIT-SLYSLGLFLGTIYSVP-P-LRMKRFPVAAFLIIATVRGFLLNFG 251

Query:   255 YFIHSQTYLLGKPFEVTGPFVFATAIMSIYAFVNGLLKDLPDVEGDKAFGMQTLCVLLGK 314
              + H+    LG PF+ + P  F T+ ++++A V  + KDLPDVEGD+ F + TL   LG 
Sbjct:   252 VY-HATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGV 310

Query:   315 EKVLPLCVNMMLLGYXXXXXXXXTSTLMISKLVTIIGHIILALMMWLRSRKVDLDNFDSQ 374
               +  L   ++L+ Y            +    + I  H+ILA  +  ++  ++  N+  +
Sbjct:   311 RNIAFLGSGLLLVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTKE 370

Query:   375 F--GFYMFLW 382
                G+Y F+W
Sbjct:   371 AISGYYRFIW 380


>TAIR|locus:2074393 [details] [associations]
            symbol:G4 species:3702 "Arabidopsis thaliana" [GO:0004659
            "prenyltransferase activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0015995 "chlorophyll
            biosynthetic process" evidence=RCA;TAS] [GO:0046408 "chlorophyll
            synthetase activity" evidence=IDA] [GO:0009534 "chloroplast
            thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009073 "aromatic amino acid family biosynthetic process"
            evidence=RCA] [GO:0009902 "chloroplast relocation" evidence=RCA]
            [GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010027
            "thylakoid membrane organization" evidence=RCA] [GO:0016117
            "carotenoid biosynthetic process" evidence=RCA] [GO:0019288
            "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] [GO:0019344 "cysteine
            biosynthetic process" evidence=RCA] [GO:0030154 "cell
            differentiation" evidence=RCA] [GO:0034660 "ncRNA metabolic
            process" evidence=RCA] [GO:0042793 "transcription from plastid
            promoter" evidence=RCA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=RCA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=TAS] InterPro:IPR000537
            InterPro:IPR006372 InterPro:IPR011799 Pfam:PF01040 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0031969 EMBL:AF049236
            GO:GO:0009534 EMBL:U19382 EMBL:AY081481 EMBL:AY042821
            IPI:IPI00536017 PIR:S60222 RefSeq:NP_190750.1 UniGene:At.5423
            STRING:Q38833 PaxDb:Q38833 PRIDE:Q38833 EnsemblPlants:AT3G51820.1
            GeneID:824345 KEGG:ath:AT3G51820 TAIR:At3g51820 eggNOG:COG0382
            HOGENOM:HOG000149392 InParanoid:Q38833 KO:K04040 OMA:NDVKYQA
            PhylomeDB:Q38833 ProtClustDB:PLN00012 BioCyc:ARA:AT3G51820-MONOMER
            BioCyc:MetaCyc:AT3G51820-MONOMER Genevestigator:Q38833
            GO:GO:0046408 GO:GO:0030494 TIGRFAMs:TIGR02056 TIGRFAMs:TIGR01476
            Uniprot:Q38833
        Length = 387

 Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
 Identities = 47/172 (27%), Positives = 73/172 (42%)

Query:   157 SLNQICDVEIDKINKPYLPLASGELS---MGTGIAICXXXXXXXXXXX---XXXXXPAVL 210
             ++N   D +ID IN+PY P+ SG +S   + T + +                    P V 
Sbjct:   153 TINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTPTVF 212

Query:   211 CAVIAWGLTGAAYSVPLPFLRWKSHTFMAPFTLVILMGLILQIPYFIHSQTYLLGKPFEV 270
                +   L    YS P P L+ K + ++  F L       + +P++   Q  L G    +
Sbjct:   213 YLALGGSLLSYIYSAP-P-LKLKQNGWVGNFALG---ASYISLPWWA-GQA-LFGT---L 262

Query:   271 TGPFVFATAIMSIYAFVNGLLKDLPDVEGDKAFGMQTLCVLLGKEKVLPLCV 322
             T   V  T + SI      ++ D   VEGD+A G+Q+L V  G E    +CV
Sbjct:   263 TPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICV 314


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.139   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      387       351   0.00078  117 3  11 22  0.45    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  233 KB (2127 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.27u 0.10s 27.37t   Elapsed:  00:00:01
  Total cpu time:  27.27u 0.10s 27.37t   Elapsed:  00:00:01
  Start:  Sat May 11 16:03:49 2013   End:  Sat May 11 16:03:50 2013

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