BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 016573
         (387 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A2Q8R9|NPL4_ASPNC Nuclear protein localization protein 4 OS=Aspergillus niger (strain
           CBS 513.88 / FGSC A1513) GN=npl4 PE=3 SV=1
          Length = 654

 Score = 34.7 bits (78), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 15/117 (12%)

Query: 107 FTGGKVEGDQGAAIHV-------VLIDMNTGDVVQTGPESSAKLNVVVLEGDFNEEEDDN 159
           F    + GD+  AI V         ++M   D+V+   E S  L   V   D + E    
Sbjct: 398 FVTCVLSGDEEGAISVSAYQASVAAVEMVRADIVEPSAEPSVML---VQSEDDDTENKSR 454

Query: 160 WTKEHF----ESHEVKEREGKRPILTGD-LLVTLKEGFGTLGDLTFTDNSSWIRSRK 211
           +  E F      + V  ++  +P    + LLVTL  GF T     FTD+S  I +R+
Sbjct: 455 YIPEVFYRKINEYGVSAQQNAKPSFPVEYLLVTLTHGFPTDASPLFTDSSFPIENRE 511


>sp|Q89925|5057R_ASFB7 Protein MGF 505-7R OS=African swine fever virus (strain Badajoz
           1971 Vero-adapted) GN=BA71R-029 PE=3 SV=1
          Length = 528

 Score = 33.5 bits (75), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 16/92 (17%)

Query: 261 LDRIAKDGALH--KKLMKADIVTVEDFLRILVRDPQKLRNILGSGMSNRMWENTVEHAK- 317
           L R  KD      K+ M+   ++ E F++I VR+    RN+L  G+S  +WEN  E  + 
Sbjct: 354 LTRYVKDSTYFQVKEFMQDFSISPEKFIKIAVREK---RNVLIKGISEDIWENPAERIRN 410

Query: 318 ----TCVLGGKLYVYYADGTQNTGVVFNNIYE 345
                C +       Y  G Q    + + IY+
Sbjct: 411 LKQIVCTIK------YESGRQFLINIIHTIYQ 436


>sp|B0TWR3|IF2_FRAP2 Translation initiation factor IF-2 OS=Francisella philomiragia
           subsp. philomiragia (strain ATCC 25017) GN=infB PE=3
           SV=1
          Length = 844

 Score = 32.0 bits (71), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 14/137 (10%)

Query: 148 LEGDFNEEEDDNWTKEHFESHEVKEREGKRPILTGDLLVTLKEGFGTLGDLT--FTDNSS 205
           L GD    ++    K   ++ +VK++E   P+ +    + ++EG  T+ DL        +
Sbjct: 226 LAGDLESFDEFGSKKGKLKAPKVKKQEFTMPVESAVKTIEIREGI-TVSDLANRMAVKGA 284

Query: 206 WIRSRKFRLGLKVSPGYCDGIRVREAKTEGFAVKDHRGELYKKHYPPALHDEVWRLDRIA 265
            I    F +G+  +      I     +     + +  G  Y  H   AL + V  +DR  
Sbjct: 285 EIVKVLFNMGVMAT------INQSLDQDTAVLIVEEMGHKYTLHNENALEEAVTTVDR-- 336

Query: 266 KDGALHKKLMKADIVTV 282
              +LHKK+ +A +VT+
Sbjct: 337 ---SLHKKISRAPVVTI 350


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.136    0.403 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,708,924
Number of Sequences: 539616
Number of extensions: 7046103
Number of successful extensions: 18326
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 18312
Number of HSP's gapped (non-prelim): 34
length of query: 387
length of database: 191,569,459
effective HSP length: 119
effective length of query: 268
effective length of database: 127,355,155
effective search space: 34131181540
effective search space used: 34131181540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)