Query 016574
Match_columns 387
No_of_seqs 292 out of 1997
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 15:51:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016574.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016574hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 3.1E-66 1.1E-70 513.4 23.6 301 41-378 7-349 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 3E-64 1E-68 490.9 24.5 272 69-373 4-308 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 7.9E-66 2.7E-70 503.3 12.2 280 70-386 2-305 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 4.2E-62 1.5E-66 475.5 14.0 267 70-373 3-304 (311)
5 1odm_A Isopenicillin N synthas 100.0 3.5E-60 1.2E-64 465.8 25.8 259 69-374 6-324 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 7.6E-58 2.6E-62 439.3 23.9 236 70-315 2-261 (280)
7 2rg4_A Uncharacterized protein 92.6 0.65 2.2E-05 41.8 9.9 43 250-310 167-209 (216)
8 2hbt_A EGL nine homolog 1; pro 47.8 17 0.00058 33.1 4.4 184 82-307 15-212 (247)
9 2dbn_A Hypothetical protein YB 43.3 13 0.00045 37.1 3.0 52 69-121 98-152 (461)
10 3dkq_A PKHD-type hydroxylase S 33.1 27 0.00091 31.8 3.2 49 240-307 146-194 (243)
11 2opi_A L-fuculose-1-phosphate 32.7 24 0.00082 31.1 2.8 33 71-103 125-160 (212)
12 2bze_A KIAA0252 protein; human 31.5 18 0.00063 30.5 1.7 25 1-33 1-25 (153)
13 2e8o_A SAM domain and HD domai 29.9 30 0.001 26.9 2.6 18 19-36 1-18 (103)
14 1e4c_P L-fuculose 1-phosphate 26.2 33 0.0011 30.2 2.5 33 71-103 122-157 (215)
15 1vm6_A DHPR, dihydrodipicolina 26.1 62 0.0021 29.1 4.3 40 73-112 56-96 (228)
16 1pvt_A Sugar-phosphate aldolas 25.1 42 0.0014 30.0 3.0 34 70-103 160-196 (238)
17 1ssk_A Nucleocapsid protein; s 24.9 34 0.0012 28.8 2.1 9 1-9 1-9 (158)
18 3oa3_A Aldolase; structural ge 24.2 38 0.0013 31.6 2.6 53 43-99 32-92 (288)
19 3ijp_A DHPR, dihydrodipicolina 23.9 64 0.0022 30.0 4.1 42 74-115 92-134 (288)
20 4f3y_A DHPR, dihydrodipicolina 23.7 67 0.0023 29.5 4.2 15 181-195 171-185 (272)
21 2fk5_A Fuculose-1-phosphate al 20.2 40 0.0014 29.4 1.7 34 70-103 116-153 (200)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=3.1e-66 Score=513.36 Aligned_cols=301 Identities=17% Similarity=0.182 Sum_probs=250.5
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCCCC---------CCCCceeeCCCh---------hHHHHHHhhhccccEEEEecCC
Q 016574 41 AADALSRLLHSLPSPTLSLPNTRTRSPS---------ATRPPLISLSNP---------NRNEQILSSASQLGFFQLTNHG 102 (387)
Q Consensus 41 ~~d~l~~~~~~~p~~~l~~p~~~~~~~~---------~~~IPvIDls~~---------~~~~~l~~A~~~~GFF~l~NHG 102 (387)
+++++...+.++|..|+++++.++.... ...||||||+.+ +++++|.+||++||||||+|||
T Consensus 7 v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHG 86 (356)
T 1gp6_A 7 VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHG 86 (356)
T ss_dssp HHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCS
T ss_pred HHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCC
Confidence 5666666788999888876554432111 236999999863 2678999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHhhccCCC---CCCCCCcCCCcc---ccCCCcceeeecCCC------CCCCCC-CCh-
Q 016574 103 ISSQLAHSAELEALSLFELERDKKLSCFPK---NWPLGYEAEEEE---DEEGNGESFCLDSAC------YSDSNE-LNL- 168 (387)
Q Consensus 103 I~~~li~~~~~~~~~FF~LP~eeK~~~~~~---~~~~GY~~~~~~---~~~d~~E~f~~~~~~------~~~p~~-~~~- 168 (387)
|+.++++++++.+++||+||.|+|+++... ...+||...... ...||+|.|.+...+ ..||.. ..+
T Consensus 87 i~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr 166 (356)
T 1gp6_A 87 IPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYI 166 (356)
T ss_dssp CCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHH
T ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhh
Confidence 999999999999999999999999999753 257899866532 235999999886532 224542 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CC---ccccccccccccCCCCCCcc-----cccCCceEEEeeeeC
Q 016574 169 TSLREFTRAMEKVGLKIFEMLAAALGFENPLGDD-PT---WYCSLLWMSKNLHGNKPVLS-----GGFYPYIVGLHYQIR 239 (387)
Q Consensus 169 ~~~~~y~~~~~~L~~~Ll~~la~~LGl~~~f~~~-~~---~~~~~~rl~~YPp~p~p~~~-----~g~~~~~ltLl~q~~ 239 (387)
+.+.+|+++|.+|+.+||++||++|||+++++.. +. ...+.+|++|||||++|+.. +.|++ +||||+|++
T Consensus 167 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g-~lTlL~qd~ 245 (356)
T 1gp6_A 167 EATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVS-ALTFILHNM 245 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCS-SEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCC-eEEEEEEcC
Confidence 8899999999999999999999999997654433 33 35678999999999988765 23554 799999999
Q ss_pred CCeeEEccCCceEeeccCCCcEEEecchHHHHHhCCccccCCCCccccCCCCCCCCCCceEEEEEcccCCCCC-eEecCC
Q 016574 240 PSKHTLIADAGSVPISAEVGSILVTLGDIAQVWSNGKTKKVRSGRPMAGLGDEKNKSDESISMILLVTLPIDS-IISPLI 318 (387)
Q Consensus 240 ~~gLqV~~~g~Wv~V~p~pgalVVNvGD~Lq~~SNG~~kS~~~HRVv~~~~~~~~~~~~R~Sia~F~~P~~d~-~I~Pl~ 318 (387)
.+||||+++|+|++|+|+||+|||||||+||+||||+|||+. |||+++ ..++|||||||++|+.|+ +|+|++
T Consensus 246 v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~-HRVv~~------~~~~R~Sia~F~~P~~d~~~i~pl~ 318 (356)
T 1gp6_A 246 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSIL-HRGLVN------KEKVRISWAVFCEPPKDKIVLKPLP 318 (356)
T ss_dssp CCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC-EEECCC------SSCCEEEEEEEEECCTTTCEECCCG
T ss_pred CCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccC-ceecCC------CCCCEEEEEEeecCCCCCcEEeCCh
Confidence 999999999999999999999999999999999999999999 999984 446899999999999999 999999
Q ss_pred cccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCccHHHHHHHHHHhhccCC
Q 016574 319 PKLDNNNNKNGDDAENTEDDNNNSEGQGQSHDDEEGRKLFESFSFEDYAWRVYHERLLFK 378 (387)
Q Consensus 319 ~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~ 378 (387)
+|++++ +|++|++|||+||+...+..++.+|
T Consensus 319 ~~~~~~-----------------------------~p~~y~~~t~~eyl~~~~~~~~d~~ 349 (356)
T 1gp6_A 319 EMVSVE-----------------------------SPAKFPPRTFAQHIEHKLFGKEQEE 349 (356)
T ss_dssp GGCCSS-----------------------------SCCSSCCEEHHHHHHHHHHHHHHHH
T ss_pred hhcCCC-----------------------------CCccCCCccHHHHHHHHHHhccCcc
Confidence 999862 6889999999999988888777665
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=3e-64 Score=490.94 Aligned_cols=272 Identities=15% Similarity=0.135 Sum_probs=227.7
Q ss_pred CCCCceeeCCCh-----hHHHHHHhhhccccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHhhccCCC-CCCCCCcCCC
Q 016574 69 ATRPPLISLSNP-----NRNEQILSSASQLGFFQLTNHGISSQLAHSAELEALSLFELERDKKLSCFPK-NWPLGYEAEE 142 (387)
Q Consensus 69 ~~~IPvIDls~~-----~~~~~l~~A~~~~GFF~l~NHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~-~~~~GY~~~~ 142 (387)
+..||||||+.+ .++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... ...+||...+
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g 83 (312)
T 3oox_A 4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFG 83 (312)
T ss_dssp CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCC
T ss_pred CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccccc
Confidence 457999999864 4789999999999999999999999999999999999999999999998763 4578997665
Q ss_pred ccc-----cCCCcceeeecCCC------------CCCCCCC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-
Q 016574 143 EED-----EEGNGESFCLDSAC------------YSDSNEL-NL-TSLREFTRAMEKVGLKIFEMLAAALGFENPLGDD- 202 (387)
Q Consensus 143 ~~~-----~~d~~E~f~~~~~~------------~~~p~~~-~~-~~~~~y~~~~~~L~~~Ll~~la~~LGl~~~f~~~- 202 (387)
.+. ..||+|.|.++... ..||... .+ +.+.+|+++|.+|+.+||++||++|||++++++.
T Consensus 84 ~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~ 163 (312)
T 3oox_A 84 VETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPT 163 (312)
T ss_dssp CCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHH
T ss_pred ceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 432 25899999886421 1233321 34 7899999999999999999999999998655543
Q ss_pred CCccccccccccccCCCCCCcc-----cccCCceEEEeeeeCCCeeEEc-cCCceEeeccCCCcEEEecchHHHHHhCCc
Q 016574 203 PTWYCSLLWMSKNLHGNKPVLS-----GGFYPYIVGLHYQIRPSKHTLI-ADAGSVPISAEVGSILVTLGDIAQVWSNGK 276 (387)
Q Consensus 203 ~~~~~~~~rl~~YPp~p~p~~~-----~g~~~~~ltLl~q~~~~gLqV~-~~g~Wv~V~p~pgalVVNvGD~Lq~~SNG~ 276 (387)
+....+.+|++|||||++++.. +.|++ +||||+|++.+||||+ ++|+|++|+|+||+|||||||+||+||||+
T Consensus 164 ~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g-~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~ 242 (312)
T 3oox_A 164 VQDGNSVLRLLHYPPIPKDATGVRAGAHGDIN-TITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNV 242 (312)
T ss_dssp HTTCCCEEEEEEECCCSSCCC--CEEEECCCS-SEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTS
T ss_pred hcCCcceeeeEecCCCCCCcCCcCccceecCc-eEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCe
Confidence 4556678999999999875432 33555 7999999999999996 478899999999999999999999999999
Q ss_pred cccCCCCccccCCCCCCCCCCceEEEEEcccCCCCCeEecCCcccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccC
Q 016574 277 TKKVRSGRPMAGLGDEKNKSDESISMILLVTLPIDSIISPLIPKLDNNNNKNGDDAENTEDDNNNSEGQGQSHDDEEGRK 356 (387)
Q Consensus 277 ~kS~~~HRVv~~~~~~~~~~~~R~Sia~F~~P~~d~~I~Pl~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~ 356 (387)
|||+. |||+.+++. ....+|||||||++|+.|++|+|+++|++++ +|+
T Consensus 243 ~kS~~-HRVv~~~~~--~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~-----------------------------~p~ 290 (312)
T 3oox_A 243 LPSTV-HRVVNPPPE--RRGVPRYSTPFFLHFASDYEIKTLQNCVTAE-----------------------------NPD 290 (312)
T ss_dssp SCCCC-EEECCCCGG--GTTSCEEECCEEECCCTTCEECCCGGGCCSS-----------------------------SCC
T ss_pred ecCCC-ceEeCCCcc--CCCCCEEEEEEEecCCCCcEEecCccccCCC-----------------------------Ccc
Confidence 99999 999876432 1246799999999999999999999999872 688
Q ss_pred CCC-CccHHHHHHHHHHh
Q 016574 357 LFE-SFSFEDYAWRVYHE 373 (387)
Q Consensus 357 ~y~-~~~~~ey~~~~~~~ 373 (387)
+|+ +|+++||+...+.+
T Consensus 291 ~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 291 RYPESITADEFLQQRLRE 308 (312)
T ss_dssp SCSSCEEHHHHHHHHHHH
T ss_pred cCCCCeeHHHHHHHHHHH
Confidence 999 99999999877664
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=7.9e-66 Score=503.27 Aligned_cols=280 Identities=23% Similarity=0.289 Sum_probs=227.2
Q ss_pred CCCceeeCCCh------hHHHHHHhhhccccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHhhccCCCCCCCCCcCCCc
Q 016574 70 TRPPLISLSNP------NRNEQILSSASQLGFFQLTNHGISSQLAHSAELEALSLFELERDKKLSCFPKNWPLGYEAEEE 143 (387)
Q Consensus 70 ~~IPvIDls~~------~~~~~l~~A~~~~GFF~l~NHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~GY~~~~~ 143 (387)
..||||||+.+ +++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... .+||.....
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~~~~~ 79 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALEGVQA 79 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCCcccc
Confidence 46999999864 3789999999999999999999999999999999999999999999997532 237765443
Q ss_pred c-ccCCCcceeeecCCCC----CCCCCC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CC---cccccccc
Q 016574 144 E-DEEGNGESFCLDSACY----SDSNEL-NL-TSLREFTRAMEKVGLKIFEMLAAALGFENPLGDD-PT---WYCSLLWM 212 (387)
Q Consensus 144 ~-~~~d~~E~f~~~~~~~----~~p~~~-~~-~~~~~y~~~~~~L~~~Ll~~la~~LGl~~~f~~~-~~---~~~~~~rl 212 (387)
+ ...||+|.|.+...+. .||... .+ +.+.+|+++|.+|+.+||++||++|||++++++. +. ...+.+|+
T Consensus 80 e~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl 159 (319)
T 1w9y_A 80 EVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKV 159 (319)
T ss_dssp CGGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEE
T ss_pred cCCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEE
Confidence 3 2358999999875322 244322 23 7899999999999999999999999997654433 32 24568999
Q ss_pred ccccCCCCCCccc-----ccCCceEEEeeee-CCCeeEEccCCceEeeccCCCcEEEecchHHHHHhCCccccCCCCccc
Q 016574 213 SKNLHGNKPVLSG-----GFYPYIVGLHYQI-RPSKHTLIADAGSVPISAEVGSILVTLGDIAQVWSNGKTKKVRSGRPM 286 (387)
Q Consensus 213 ~~YPp~p~p~~~~-----g~~~~~ltLl~q~-~~~gLqV~~~g~Wv~V~p~pgalVVNvGD~Lq~~SNG~~kS~~~HRVv 286 (387)
+|||||++|+.+. .|++ +||||+|+ +++||||+++|+|++|+|+||+|||||||+||+||||+|||+. |||+
T Consensus 160 ~~YPp~~~~~~~~g~~~HtD~g-~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~-HRVv 237 (319)
T 1w9y_A 160 SNYPPCPKPDLIKGLRAHTDAG-GIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVM-HRVI 237 (319)
T ss_dssp EECCCCSCGGGGSSCCCBCCSS-SEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC-EEEC
T ss_pred EecCCCcccccccccccccCCC-ceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeeccc-ceec
Confidence 9999999887653 3444 79999995 7899999989999999999999999999999999999999999 9999
Q ss_pred cCCCCCCCCCCceEEEEEcccCCCCCeEecCCcccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCccHHHH
Q 016574 287 AGLGDEKNKSDESISMILLVTLPIDSIISPLIPKLDNNNNKNGDDAENTEDDNNNSEGQGQSHDDEEGRKLFESFSFEDY 366 (387)
Q Consensus 287 ~~~~~~~~~~~~R~Sia~F~~P~~d~~I~Pl~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~y~~~~~~ey 366 (387)
++ ..++|||||||++|+.|++|.|+++|++++ . +.+|++|++|+|+||
T Consensus 238 ~~------~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~------------------~--------~~~p~~Y~~~t~~ey 285 (319)
T 1w9y_A 238 AQ------KDGARMSLASFYNPGSDAVIYPAPALVEKE------------------A--------EENKQVYPKFVFDDY 285 (319)
T ss_dssp CC------SSSCCEEEEEEEECCTTCEECCCGGGC----------------------------------CCCCCEEHHHH
T ss_pred CC------CCCCceEEEEEecCCCCCeEeCchhhcCcc------------------c--------ccCccccCcEeHHHH
Confidence 84 456899999999999999999999998761 0 003889999999999
Q ss_pred HHHHHHhhccCCCCc-cccCC
Q 016574 367 AWRVYHERLLFKDDP-LDRYR 386 (387)
Q Consensus 367 ~~~~~~~~~~~~~~~-l~~~r 386 (387)
+..++...+.++ .. ++.+|
T Consensus 286 ~~~~~~~~~~~~-~~~~~~~~ 305 (319)
T 1w9y_A 286 MKLYAGLKFQAK-EPRFEAMK 305 (319)
T ss_dssp HHTTTTTTCSSH-HHHHHHHH
T ss_pred HHHHHhhhcCcc-hhHHHHHH
Confidence 988777766665 33 45554
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=4.2e-62 Score=475.50 Aligned_cols=267 Identities=16% Similarity=0.105 Sum_probs=214.7
Q ss_pred CCCceeeCCCh---hHHHHHHhhhccccEEEEecCCCCHHHHHHHHHHHHHHhcCC-HHHhhccCCC--CCCCCCcCCCc
Q 016574 70 TRPPLISLSNP---NRNEQILSSASQLGFFQLTNHGISSQLAHSAELEALSLFELE-RDKKLSCFPK--NWPLGYEAEEE 143 (387)
Q Consensus 70 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~l~NHGI~~~li~~~~~~~~~FF~LP-~eeK~~~~~~--~~~~GY~~~~~ 143 (387)
..||||||+.+ +..++|.+||++||||||+|||||.++++++++++++||+|| .|+|+++... ...+||...+.
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~ 82 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLES 82 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC--
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccc
Confidence 46999999854 234599999999999999999999999999999999999999 9999999764 35789987654
Q ss_pred c---------ccCCCcceeeecCCCCCCCCCCCh-HHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCCCCCCCccccc
Q 016574 144 E---------DEEGNGESFCLDSACYSDSNELNL-TSLREFTRAMEKVGLKIFEMLAAALGF----ENPLGDDPTWYCSL 209 (387)
Q Consensus 144 ~---------~~~d~~E~f~~~~~~~~~p~~~~~-~~~~~y~~~~~~L~~~Ll~~la~~LGl----~~~f~~~~~~~~~~ 209 (387)
+ ...||+|.|.+...+..|| ...+ +.+.+|+++|.+|+.+||++||++||| ++++++.. .+.
T Consensus 83 e~~~~~~~~~~~~d~~E~~~~~~~~n~wP-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~---~~~ 158 (311)
T 1dcs_A 83 ESTAQITNTGSYSDYSMCYSMGTADNLFP-SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC---EPL 158 (311)
T ss_dssp ---------------CEEEEECSSSCCCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC---CCE
T ss_pred cccccccCCCCCCCcceeeeccCCCCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc---chh
Confidence 2 1358999999987655566 3334 789999999999999999999999999 54443322 678
Q ss_pred cccccccCCCCCCc----c-----cccCCceEEEeeee-CCCe---eEEccCCceEeeccCCCcEEEecchHHHHHhCCc
Q 016574 210 LWMSKNLHGNKPVL----S-----GGFYPYIVGLHYQI-RPSK---HTLIADAGSVPISAEVGSILVTLGDIAQVWSNGK 276 (387)
Q Consensus 210 ~rl~~YPp~p~p~~----~-----~g~~~~~ltLl~q~-~~~g---LqV~~~g~Wv~V~p~pgalVVNvGD~Lq~~SNG~ 276 (387)
+|++|||||++++. . +.|++ +||||+|+ +.+| |||+++|+|++|+|+||+|||||||+||+||||+
T Consensus 159 lrl~~YPp~~~~~~~~~~~~g~~~HtD~g-~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~ 237 (311)
T 1dcs_A 159 LRFRYFPQVPEHRSAEEQPLRMAPHYDLS-MVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQ 237 (311)
T ss_dssp EEEEEECC-----------CCEEEEEECS-SEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSC
T ss_pred hheecCCCCCcccccCccccccccccCCC-eEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCc
Confidence 99999999987631 1 23454 79999999 8899 9999988999999999999999999999999999
Q ss_pred cccCCCCccccCCCCCCCCCCceEEEEEcccCCCCCeEecCCcccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccC
Q 016574 277 TKKVRSGRPMAGLGDEKNKSDESISMILLVTLPIDSIISPLIPKLDNNNNKNGDDAENTEDDNNNSEGQGQSHDDEEGRK 356 (387)
Q Consensus 277 ~kS~~~HRVv~~~~~~~~~~~~R~Sia~F~~P~~d~~I~Pl~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~ 356 (387)
|||+. |||++++... ...++|||||||++|+.|++|+ ++++++++ +|+
T Consensus 238 ~kS~~-HRVv~~~~~~-~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~-----------------------------~p~ 285 (311)
T 1dcs_A 238 VKAPR-HHVAAPRRDQ-IAGSSRTSSVFFLRPNADFTFS-VPLARECG-----------------------------FDV 285 (311)
T ss_dssp SCCCC-EEECCC-----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTT-----------------------------CCC
T ss_pred ccCCC-ceEeCCCccc-CCCCCeEEEEEEEcCCCCcEEe-CCcccCCC-----------------------------Ccc
Confidence 99999 9999864210 1256899999999999999999 99998761 688
Q ss_pred CC--CCccHHHHHHHHHHh
Q 016574 357 LF--ESFSFEDYAWRVYHE 373 (387)
Q Consensus 357 ~y--~~~~~~ey~~~~~~~ 373 (387)
+| +++|++||+...+..
T Consensus 286 ~y~~~~~t~~ey~~~~~~~ 304 (311)
T 1dcs_A 286 SLDGETATFQDWIGGNYVN 304 (311)
T ss_dssp CCCSSEEEHHHHHCSSCCC
T ss_pred ccCCCCccHHHHHHHHHHH
Confidence 99 999999999655443
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.5e-60 Score=465.83 Aligned_cols=259 Identities=18% Similarity=0.154 Sum_probs=218.8
Q ss_pred CCCCceeeCCCh---------hHHHHHHhhhccccEEEEecCCCCHHHHHHHHHHHHHH-hcCCHHHhhccCCCCCCCCC
Q 016574 69 ATRPPLISLSNP---------NRNEQILSSASQLGFFQLTNHGISSQLAHSAELEALSL-FELERDKKLSCFPKNWPLGY 138 (387)
Q Consensus 69 ~~~IPvIDls~~---------~~~~~l~~A~~~~GFF~l~NHGI~~~li~~~~~~~~~F-F~LP~eeK~~~~~~~~~~GY 138 (387)
...||||||+.+ +++++|.+||++||||||+|||| +++++++++++| |+||.|+|+++.. +||
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~----~Gy 78 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI----RAY 78 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC----TTT
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh----cCC
Confidence 357999999863 26889999999999999999999 999999999999 9999999999865 677
Q ss_pred cCCCcc-----------ccCCCcceeeecCCC----------------CCCCCC---CCh-HHHHHHHHHHHHHHHHHHH
Q 016574 139 EAEEEE-----------DEEGNGESFCLDSAC----------------YSDSNE---LNL-TSLREFTRAMEKVGLKIFE 187 (387)
Q Consensus 139 ~~~~~~-----------~~~d~~E~f~~~~~~----------------~~~p~~---~~~-~~~~~y~~~~~~L~~~Ll~ 187 (387)
...+.+ ...||+|+|.+.... ..||.. ..+ +.+.+|+++|.+|+.+||+
T Consensus 79 ~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~ 158 (331)
T 1odm_A 79 NKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLK 158 (331)
T ss_dssp CTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 655432 134899999987531 224442 234 7899999999999999999
Q ss_pred HHHHHhCCCCCCCC-CCCccccccc--ccccc------C---CCCCCc-c-----cccCCceEEEeeeeCCCeeEEc-cC
Q 016574 188 MLAAALGFENPLGD-DPTWYCSLLW--MSKNL------H---GNKPVL-S-----GGFYPYIVGLHYQIRPSKHTLI-AD 248 (387)
Q Consensus 188 ~la~~LGl~~~f~~-~~~~~~~~~r--l~~YP------p---~p~p~~-~-----~g~~~~~ltLl~q~~~~gLqV~-~~ 248 (387)
+||++|||++++++ .+....+.+| ++||| | |++|+. . +.|++ +||||+|++++||||+ ++
T Consensus 159 ~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g-~lTlL~qd~v~GLQV~~~~ 237 (331)
T 1odm_A 159 GYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVS-LITVLYQSNVQNLQVETAA 237 (331)
T ss_dssp HHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSS-SEEEEEECSSCCEEEEETT
T ss_pred HHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCC-eEEEEeeCCCCCEEEEcCC
Confidence 99999999765544 3555678899 99999 8 877775 4 33555 7999999999999999 57
Q ss_pred CceEeeccCCCcEEEecchHHHHHhCCccccCCCCccccCCCCCCCCCCceEEEEEcccCCCCCeEecCCcccCCCCCCC
Q 016574 249 AGSVPISAEVGSILVTLGDIAQVWSNGKTKKVRSGRPMAGLGDEKNKSDESISMILLVTLPIDSIISPLIPKLDNNNNKN 328 (387)
Q Consensus 249 g~Wv~V~p~pgalVVNvGD~Lq~~SNG~~kS~~~HRVv~~~~~~~~~~~~R~Sia~F~~P~~d~~I~Pl~~~v~~~~~~~ 328 (387)
| |++|+|+||+|||||||+||+||||+|||+. |||+.+ .++|||||||++|+.|++|+|++++++++
T Consensus 238 g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~-HRVv~~-------~~~R~Sia~F~~P~~d~~i~pl~~~~~~~---- 304 (331)
T 1odm_A 238 G-YQDIEADDTGYLINCGSYMAHLTNNYYKAPI-HRVKWV-------NAERQSLPFFVNLGYDSVIDPFDPREPNG---- 304 (331)
T ss_dssp E-EEECCCCTTSEEEEECHHHHHHTTTSSCCCC-EEEECC-------CSCEEEEEEEECCCTTCBCCCCCTTSTTC----
T ss_pred C-eEECCCCCCeEEEEccHHHHHHhCCEeeCCC-ceeCCC-------CCCEEEEEEEEcCCCCCEEeCCCcccccc----
Confidence 7 9999999999999999999999999999999 999863 36899999999999999999999998761
Q ss_pred CCCCCCccccCCCCCCCCCCCCCccccCCCCCccHHHHHHHHHHhh
Q 016574 329 GDDAENTEDDNNNSEGQGQSHDDEEGRKLFESFSFEDYAWRVYHER 374 (387)
Q Consensus 329 ~~~~~~~~~~~~~~~g~~~~~~~~~~p~~y~~~~~~ey~~~~~~~~ 374 (387)
+ ++|++|+++||+...+.+.
T Consensus 305 -------------------------~-~~y~~~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 305 -------------------------K-SDREPLSYGDYLQNGLVSL 324 (331)
T ss_dssp -------------------------C-CSSCCCBHHHHHHHHHHHH
T ss_pred -------------------------c-cCCCCccHHHHHHHHHHHH
Confidence 4 6899999999998777654
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=7.6e-58 Score=439.28 Aligned_cols=236 Identities=15% Similarity=0.154 Sum_probs=194.9
Q ss_pred CCCceeeCCChhHHHHHHhhhccccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHhhccCCC-CCCCCCcCCC-ccc--
Q 016574 70 TRPPLISLSNPNRNEQILSSASQLGFFQLTNHGISSQLAHSAELEALSLFELERDKKLSCFPK-NWPLGYEAEE-EED-- 145 (387)
Q Consensus 70 ~~IPvIDls~~~~~~~l~~A~~~~GFF~l~NHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~-~~~~GY~~~~-~~~-- 145 (387)
++||||||+..+.+++|.+||++||||||+|||||.++++++++++++||+| |+|+++... ...+||...+ .+.
T Consensus 2 ~~IPvIDls~~~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e~~~ 79 (280)
T 3on7_A 2 MKLETIDYRAADSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISETAK 79 (280)
T ss_dssp --CCEEETTSTTHHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC------
T ss_pred CCCCEEECCChhHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCccccccC
Confidence 4699999999889999999999999999999999999999999999999998 789988653 4579998765 221
Q ss_pred ---cCCCcceeeecCCCCCCCC-CCCh-HHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCCCC----Ccc-ccccccc
Q 016574 146 ---EEGNGESFCLDSACYSDSN-ELNL-TSLREFTRAMEKVGLKIFEMLAAALGFE--NPLGDDP----TWY-CSLLWMS 213 (387)
Q Consensus 146 ---~~d~~E~f~~~~~~~~~p~-~~~~-~~~~~y~~~~~~L~~~Ll~~la~~LGl~--~~f~~~~----~~~-~~~~rl~ 213 (387)
..||+|.|.+. ++|. +..+ +.+.+|+++|.+|+.+||++||++||++ +.|.+.+ ... .+.+|++
T Consensus 80 ~~~~~D~kE~~~~~----p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~ 155 (280)
T 3on7_A 80 GHTVKDIKEYYHVY----PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRIL 155 (280)
T ss_dssp --CCCCSCEEEEEC----TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEE
T ss_pred CCCcccHHHHHhcC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEE
Confidence 25899999874 3332 2234 8899999999999999999999999985 3443322 223 3789999
Q ss_pred cccCCCCCCc--c-----cccCCceEEEeeeeCCCeeEEcc-CCceEeeccCCCcEEEecchHHHHHhCCccccCCCCcc
Q 016574 214 KNLHGNKPVL--S-----GGFYPYIVGLHYQIRPSKHTLIA-DAGSVPISAEVGSILVTLGDIAQVWSNGKTKKVRSGRP 285 (387)
Q Consensus 214 ~YPp~p~p~~--~-----~g~~~~~ltLl~q~~~~gLqV~~-~g~Wv~V~p~pgalVVNvGD~Lq~~SNG~~kS~~~HRV 285 (387)
|||||+.++. . +.|++ ++|||+|++.+||||+. +|+|++|+|+||+|||||||+||+||||+|||+. |||
T Consensus 156 ~YP~~~~~~~~~~~g~~~HtD~g-~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~-HRV 233 (280)
T 3on7_A 156 HYPPMTGDEEMGAIRAAAHEDIN-LITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTS-HRV 233 (280)
T ss_dssp EECCCCTTCCCCSEEEEEECCCS-SEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCC-EEE
T ss_pred ECCCCCCccccCcccccCCCCCC-eEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCC-ceE
Confidence 9999987542 2 34555 89999999999999985 7889999999999999999999999999999999 999
Q ss_pred ccCCCCCCCCCCceEEEEEcccCCCCCeEe
Q 016574 286 MAGLGDEKNKSDESISMILLVTLPIDSIIS 315 (387)
Q Consensus 286 v~~~~~~~~~~~~R~Sia~F~~P~~d~~I~ 315 (387)
+.+++. +...+|||||||++|+.|++|.
T Consensus 234 v~~~~~--~~~~~R~Si~~F~~P~~d~~i~ 261 (280)
T 3on7_A 234 INPEGT--DKTKSRISLPLFLHPHPSVVLS 261 (280)
T ss_dssp ECCTTC--CTTSCEEECCEEECCCTTCBCS
T ss_pred eCCCCC--CCCCCeEEEEEEEcCCCCCEEC
Confidence 987543 2356899999999999998874
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.62 E-value=0.65 Score=41.80 Aligned_cols=43 Identities=14% Similarity=0.094 Sum_probs=32.2
Q ss_pred ceEeeccCCCcEEEecchHHHHHhCCccccCCCCccccCCCCCCCCCCceEEEEEcccCCC
Q 016574 250 GSVPISAEVGSILVTLGDIAQVWSNGKTKKVRSGRPMAGLGDEKNKSDESISMILLVTLPI 310 (387)
Q Consensus 250 ~Wv~V~p~pgalVVNvGD~Lq~~SNG~~kS~~~HRVv~~~~~~~~~~~~R~Sia~F~~P~~ 310 (387)
.|+.|.|.+|.+||.-+. .. |.|... .+..+|+||+|.+.+..
T Consensus 167 ~~~~i~P~~G~lvlFpS~------------l~-H~V~p~-----~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 167 TFRSVAPKVGDVLLWESW------------LR-HEVPMN-----MAEEDRISVSFNYAWGE 209 (216)
T ss_dssp SEEEECCCTTEEEEEETT------------SC-EEECCC-----CSSSCEEEEEEEEEC--
T ss_pred CeeEecCCCCeEEEECCC------------CE-EeccCC-----CCCCCEEEEEEEeecCC
Confidence 467899999999996553 35 999873 34468999999987754
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=47.82 E-value=17 Score=33.06 Aligned_cols=184 Identities=9% Similarity=0.023 Sum_probs=91.7
Q ss_pred HHHHHHhhhccccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHhhccCCCCCCCCCcCCCccccCCCcceeeecCCCCC
Q 016574 82 RNEQILSSASQLGFFQLTNHGISSQLAHSAELEALSLFELERDKKLSCFPKNWPLGYEAEEEEDEEGNGESFCLDSACYS 161 (387)
Q Consensus 82 ~~~~l~~A~~~~GFF~l~NHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~GY~~~~~~~~~d~~E~f~~~~~~~~ 161 (387)
....|.+++.+.|++++-|- ++.++++.+.+.++..- +...+... ..|-........--..+..|++..
T Consensus 15 ~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~-----~~g~~~~a--~i~~~~~~~~~~iR~d~i~wl~~~--- 83 (247)
T 2hbt_A 15 ALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALH-----DTGKFTDG--QLVSQKSDSSKDIRGDKITWIEGK--- 83 (247)
T ss_dssp HHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHH-----HTTCSCSC--CEEECCSSSTTCEECCEEEEECSC---
T ss_pred hHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhh-----hcCCcccc--ccccccccccccccccceeeeccc---
Confidence 34678899999999886544 99999999988887642 11111110 000000000000001123344321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccccccccC-CCC--CCcc-cccCCceEEEee-
Q 016574 162 DSNELNLTSLREFTRAMEKVGLKIFEMLAAALGFENPLGDDPTWYCSLLWMSKNLH-GNK--PVLS-GGFYPYIVGLHY- 236 (387)
Q Consensus 162 ~p~~~~~~~~~~y~~~~~~L~~~Ll~~la~~LGl~~~f~~~~~~~~~~~rl~~YPp-~p~--p~~~-~g~~~~~ltLl~- 236 (387)
....+.+..|.+.|.+|... +...||+.. .. ...-+.+.+|++ ... +... .+...-.+|+++
T Consensus 84 ---~~~~~~~~~l~~~i~~l~~~----ln~~lGl~~-----i~-~~~e~~~~~Y~~~G~~y~~H~D~~~~~~R~~T~vlY 150 (247)
T 2hbt_A 84 ---EPGCETIGLLMSSMDDLIRH----CNGKLGSYK-----IN-GRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYY 150 (247)
T ss_dssp ---STTCHHHHHHHHHHHHHHHH----TTTTSTTCC-----EE-EECCEEEEEECSSSCCEEEECSSCSCCSEEEEEEEE
T ss_pred ---ccchhHHHHHHHHHHHHHHH----HhhhcCccc-----cc-ccceEEEEEecCCCCcccccccCCCCCCceEEEEEE
Confidence 11234444566655544432 222244310 00 011234556664 210 0000 010111344332
Q ss_pred -ee------CCCeeEEccCC--ceEeeccCCCcEEEecchHHHHHhCCccccCCCCccccCCCCCCCCCCceEEEEEccc
Q 016574 237 -QI------RPSKHTLIADA--GSVPISAEVGSILVTLGDIAQVWSNGKTKKVRSGRPMAGLGDEKNKSDESISMILLVT 307 (387)
Q Consensus 237 -q~------~~~gLqV~~~g--~Wv~V~p~pgalVVNvGD~Lq~~SNG~~kS~~~HRVv~~~~~~~~~~~~R~Sia~F~~ 307 (387)
.+ .|+.|.++.++ ....|.|..|.+|+.-.+ . ... |.|.. ....|+||+..+.
T Consensus 151 LN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~-------~---~~~-H~V~p-------~~~~R~sit~W~~ 212 (247)
T 2hbt_A 151 LNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD-------R---RNP-HEVQP-------AYATRYAITVWYF 212 (247)
T ss_dssp CBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS-------T---TCC-EEECC-------BSSCEEEEEEEEE
T ss_pred eCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC-------C---Cce-eeecc-------CCCEEEEEEEEEc
Confidence 22 26678887654 578999999999997642 2 157 99875 2357999998665
No 9
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=43.33 E-value=13 Score=37.06 Aligned_cols=52 Identities=12% Similarity=0.142 Sum_probs=41.2
Q ss_pred CCCCceeeCCChh---HHHHHHhhhccccEEEEecCCCCHHHHHHHHHHHHHHhcC
Q 016574 69 ATRPPLISLSNPN---RNEQILSSASQLGFFQLTNHGISSQLAHSAELEALSLFEL 121 (387)
Q Consensus 69 ~~~IPvIDls~~~---~~~~l~~A~~~~GFF~l~NHGI~~~li~~~~~~~~~FF~L 121 (387)
...||.||++++. ..++.++..++.|++.|.|. ||.+......+...+|.+.
T Consensus 98 ~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp CCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 3579999998652 33677789999999999888 9999888887777777533
No 10
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=33.10 E-value=27 Score=31.79 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=34.4
Q ss_pred CCeeEEccCCceEeeccCCCcEEEecchHHHHHhCCccccCCCCccccCCCCCCCCCCceEEEEEccc
Q 016574 240 PSKHTLIADAGSVPISAEVGSILVTLGDIAQVWSNGKTKKVRSGRPMAGLGDEKNKSDESISMILLVT 307 (387)
Q Consensus 240 ~~gLqV~~~g~Wv~V~p~pgalVVNvGD~Lq~~SNG~~kS~~~HRVv~~~~~~~~~~~~R~Sia~F~~ 307 (387)
|+.+.+....+=..|+|..|.+||.-. ... |+|..- ....||++..+++
T Consensus 146 GGetvf~~~~~~~~V~P~~G~~v~F~s------------~~l-H~v~pV------~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 146 GGELVIQDTYGQQSIKLSAGSLVLYPS------------SSL-HQVTPV------LSGERTAAFMWLQ 194 (243)
T ss_dssp ECCEEEEETTEEEEECCCTTCEEEEET------------TSE-EEECCE------EEECEEEEEEEEE
T ss_pred CceEEEeeCCCcEEEecCCCEEEEECC------------CCe-EcCccc------cccCEEEEEEehh
Confidence 566666544445789999999999642 357 998751 2347999998865
No 11
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=32.74 E-value=24 Score=31.07 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=27.7
Q ss_pred CCceeeCCCh---hHHHHHHhhhccccEEEEecCCC
Q 016574 71 RPPLISLSNP---NRNEQILSSASQLGFFQLTNHGI 103 (387)
Q Consensus 71 ~IPvIDls~~---~~~~~l~~A~~~~GFF~l~NHGI 103 (387)
.||+++...+ +.++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998643 57888999998888899999996
No 12
>2bze_A KIAA0252 protein; human RTF1 PLUS3 domain, transcription, elongation, PAF1 complex, histone H3 methylation, H2B ubiquitination, CDC73, LEO1, CTR9; NMR {Homo sapiens} SCOP: b.34.21.1
Probab=31.53 E-value=18 Score=30.46 Aligned_cols=25 Identities=20% Similarity=0.123 Sum_probs=17.8
Q ss_pred CcchhhhhhhhccCCcccCCCCCCCCCCCCCCC
Q 016574 1 MASSAHKQQRQLHLPNICVGGGAAPPPTPSNNH 33 (387)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~apppsp~~~~ 33 (387)
|.||.|.|| ++.+++++.+.|+++-
T Consensus 1 ~~~~~~~~~--------~~~~~~~~~~~~v~~l 25 (153)
T 2bze_A 1 MGSSHHHHH--------HSSGLVPRGSHMVSLP 25 (153)
T ss_dssp CCSCSCCCC--------CSSCCCCSSCSBCCCH
T ss_pred CCccccccc--------ccCCCCCCCCCCcCCH
Confidence 778888777 3556677888887653
No 13
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.86 E-value=30 Score=26.86 Aligned_cols=18 Identities=22% Similarity=0.257 Sum_probs=14.7
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 016574 19 VGGGAAPPPTPSNNHPST 36 (387)
Q Consensus 19 ~~~~~apppsp~~~~~~~ 36 (387)
||+++.||+||.+-+.+.
T Consensus 1 ~~~~~~~~~tp~~~~~~~ 18 (103)
T 2e8o_A 1 GSSGSSGSNTPSAEADWS 18 (103)
T ss_dssp CCCCCCCCCCCSCCCSCC
T ss_pred CCCCCCCCCCccccccCC
Confidence 788999999999777543
No 14
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=26.25 E-value=33 Score=30.21 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=27.4
Q ss_pred CCceeeCCCh---hHHHHHHhhhccccEEEEecCCC
Q 016574 71 RPPLISLSNP---NRNEQILSSASQLGFFQLTNHGI 103 (387)
Q Consensus 71 ~IPvIDls~~---~~~~~l~~A~~~~GFF~l~NHGI 103 (387)
.||++++..+ +.++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999988643 57788999998888888999996
No 15
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=26.10 E-value=62 Score=29.14 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=33.2
Q ss_pred ceeeCCChhHHHHHHhhhccccEEEEec-CCCCHHHHHHHH
Q 016574 73 PLISLSNPNRNEQILSSASQLGFFQLTN-HGISSQLAHSAE 112 (387)
Q Consensus 73 PvIDls~~~~~~~l~~A~~~~GFF~l~N-HGI~~~li~~~~ 112 (387)
=+|||+.++.+....+.|.+.|.=.|++ -|.+.+.++.+.
T Consensus 56 VvIDFT~P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~ 96 (228)
T 1vm6_A 56 VVIDFSSPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLR 96 (228)
T ss_dssp EEEECSCGGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH
Confidence 4899999998889999999999998886 588887665553
No 16
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=25.12 E-value=42 Score=30.02 Aligned_cols=34 Identities=9% Similarity=0.219 Sum_probs=28.0
Q ss_pred CCCceeeCCCh---hHHHHHHhhhccccEEEEecCCC
Q 016574 70 TRPPLISLSNP---NRNEQILSSASQLGFFQLTNHGI 103 (387)
Q Consensus 70 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~l~NHGI 103 (387)
..||++++..+ +.++.+.+++++.-.+.|.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 36999998643 57888999998888899999996
No 17
>1ssk_A Nucleocapsid protein; structural protein; NMR {Sars coronavirus} SCOP: b.148.1.1
Probab=24.89 E-value=34 Score=28.83 Aligned_cols=9 Identities=44% Similarity=0.645 Sum_probs=7.4
Q ss_pred Ccchhhhhh
Q 016574 1 MASSAHKQQ 9 (387)
Q Consensus 1 ~~~~~~~~~ 9 (387)
|.||.|.||
T Consensus 1 ~~~~~~~~~ 9 (158)
T 1ssk_A 1 MGSSHHHHH 9 (158)
T ss_dssp CCSSCCSSC
T ss_pred CCccccccc
Confidence 788888877
No 18
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=24.18 E-value=38 Score=31.62 Aligned_cols=53 Identities=17% Similarity=0.249 Sum_probs=32.8
Q ss_pred HHHHHhhccCC--CCCCCCCCCCCCCCCCCCCceeeCCCh------hHHHHHHhhhccccEEEEe
Q 016574 43 DALSRLLHSLP--SPTLSLPNTRTRSPSATRPPLISLSNP------NRNEQILSSASQLGFFQLT 99 (387)
Q Consensus 43 d~l~~~~~~~p--~~~l~~p~~~~~~~~~~~IPvIDls~~------~~~~~l~~A~~~~GFF~l~ 99 (387)
.+|+++..+|| ..+...|... ...-...||..-+ +.++++.+.+.++||.-|.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~----~~~la~~IDhTlL~p~~T~~dI~~lc~eA~~~g~aaVC 92 (288)
T 3oa3_A 32 LLISGKKATLQYPIPLLCYPAPE----VVSIAQIIDHTQLSLSATGSQIDVLCAEAKEYGFATVC 92 (288)
T ss_dssp HHHHHHHTTSCSSCCCSCSCCCC----GGGGGGGEEEECCCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCccccccCCCCC----HHHHHHhcCcccCCCCCCHHHHHHHHHHHHhcCCcEEE
Confidence 45778888884 2222222111 1223567887632 4688888888999998775
No 19
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=23.91 E-value=64 Score=30.02 Aligned_cols=42 Identities=17% Similarity=0.195 Sum_probs=26.4
Q ss_pred eeeCCChhHHHHHHhhhccccEEEEec-CCCCHHHHHHHHHHH
Q 016574 74 LISLSNPNRNEQILSSASQLGFFQLTN-HGISSQLAHSAELEA 115 (387)
Q Consensus 74 vIDls~~~~~~~l~~A~~~~GFF~l~N-HGI~~~li~~~~~~~ 115 (387)
+||++.++........|.+.|.=.|+. -|.+.+.++++.+++
T Consensus 92 vIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa 134 (288)
T 3ijp_A 92 ILDFSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFA 134 (288)
T ss_dssp EEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHh
Confidence 788987766666666666666666663 566665555554444
No 20
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=23.69 E-value=67 Score=29.51 Aligned_cols=15 Identities=40% Similarity=0.346 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHhCC
Q 016574 181 VGLKIFEMLAAALGF 195 (387)
Q Consensus 181 L~~~Ll~~la~~LGl 195 (387)
.|.+|.+.|+++++.
T Consensus 171 TA~~la~~i~~~~~~ 185 (272)
T 4f3y_A 171 TALMMGETIAAATGR 185 (272)
T ss_dssp HHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 456677778888775
No 21
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=20.15 E-value=40 Score=29.42 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=26.6
Q ss_pred CCCcee-eCCCh---hHHHHHHhhhccccEEEEecCCC
Q 016574 70 TRPPLI-SLSNP---NRNEQILSSASQLGFFQLTNHGI 103 (387)
Q Consensus 70 ~~IPvI-Dls~~---~~~~~l~~A~~~~GFF~l~NHGI 103 (387)
..||++ ++..+ +.++.+.+++.+.-.+.|.|||+
T Consensus 116 ~~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 116 KEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp SCEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CCceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 369999 76543 57788888888888888999995
Done!