Query 016578
Match_columns 387
No_of_seqs 498 out of 3050
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:55:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016578.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016578hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 3.8E-67 1.3E-71 507.4 26.1 272 97-374 20-292 (294)
2 3adn_A Spermidine synthase; am 100.0 1.4E-56 4.9E-61 435.3 21.5 271 97-374 20-292 (294)
3 1xj5_A Spermidine synthase 1; 100.0 8.7E-55 3E-59 429.8 31.4 300 41-374 33-332 (334)
4 2i7c_A Spermidine synthase; tr 100.0 1.5E-54 5.1E-59 418.4 29.6 280 52-372 2-281 (283)
5 2b2c_A Spermidine synthase; be 100.0 5.6E-55 1.9E-59 427.8 26.3 300 49-372 2-314 (314)
6 2o07_A Spermidine synthase; st 100.0 2.8E-54 9.7E-59 420.9 27.7 288 48-373 15-302 (304)
7 1iy9_A Spermidine synthase; ro 100.0 1.7E-53 6E-58 409.5 26.5 264 97-372 12-275 (275)
8 1inl_A Spermidine synthase; be 100.0 1.4E-52 4.7E-57 407.3 27.7 290 41-373 5-295 (296)
9 2pt6_A Spermidine synthase; tr 100.0 1.3E-51 4.4E-56 405.0 28.2 281 51-373 39-320 (321)
10 3bwc_A Spermidine synthase; SA 100.0 1.7E-51 6E-56 400.7 27.5 287 48-372 12-302 (304)
11 1uir_A Polyamine aminopropyltr 100.0 1.3E-49 4.3E-54 389.4 28.3 276 97-379 14-294 (314)
12 1mjf_A Spermidine synthase; sp 100.0 1.9E-49 6.4E-54 382.2 24.8 262 97-373 12-280 (281)
13 2cmg_A Spermidine synthase; tr 100.0 3.9E-49 1.3E-53 377.1 18.2 249 97-374 10-259 (262)
14 3c6k_A Spermine synthase; sper 100.0 2.8E-47 9.4E-52 378.9 23.9 226 94-325 141-380 (381)
15 2qfm_A Spermine synthase; sper 100.0 4E-43 1.4E-47 347.8 26.4 223 95-323 125-361 (364)
16 3gjy_A Spermidine synthase; AP 100.0 3.3E-32 1.1E-36 266.2 22.3 235 113-360 29-282 (317)
17 3duw_A OMT, O-methyltransferas 99.6 4E-14 1.4E-18 129.4 15.0 152 159-322 57-221 (223)
18 3tfw_A Putative O-methyltransf 99.6 1.1E-13 3.9E-18 129.6 17.6 153 159-323 62-225 (248)
19 3orh_A Guanidinoacetate N-meth 99.6 2.1E-14 7.3E-19 133.8 12.4 123 143-274 46-169 (236)
20 3c3y_A Pfomt, O-methyltransfer 99.5 3.6E-14 1.2E-18 132.3 13.5 150 159-323 69-236 (237)
21 3p9n_A Possible methyltransfer 99.5 7.1E-14 2.4E-18 124.8 13.9 110 159-276 43-154 (189)
22 1sui_A Caffeoyl-COA O-methyltr 99.5 7.4E-14 2.5E-18 131.2 13.7 149 159-322 78-245 (247)
23 3ntv_A MW1564 protein; rossman 99.5 1.2E-13 4.1E-18 128.0 14.9 104 159-273 70-174 (232)
24 3dr5_A Putative O-methyltransf 99.5 1.2E-13 4.2E-18 127.7 14.9 103 163-274 59-162 (221)
25 3c3p_A Methyltransferase; NP_9 99.5 8.6E-14 2.9E-18 126.4 12.7 147 159-323 55-209 (210)
26 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1.5E-13 5.2E-18 126.8 13.8 114 160-277 34-152 (218)
27 1yzh_A TRNA (guanine-N(7)-)-me 99.5 2.9E-13 9.8E-18 123.4 14.7 113 160-276 41-157 (214)
28 2fca_A TRNA (guanine-N(7)-)-me 99.5 3.5E-13 1.2E-17 123.4 15.3 114 160-277 38-155 (213)
29 1dus_A MJ0882; hypothetical pr 99.5 2.5E-12 8.6E-17 113.3 19.4 135 146-297 41-175 (194)
30 3r3h_A O-methyltransferase, SA 99.5 1.4E-13 4.7E-18 129.0 11.6 106 159-274 59-169 (242)
31 3tr6_A O-methyltransferase; ce 99.5 8.4E-13 2.9E-17 120.6 15.8 106 159-274 63-173 (225)
32 2avd_A Catechol-O-methyltransf 99.5 9E-13 3.1E-17 120.7 14.5 148 159-322 68-228 (229)
33 4gek_A TRNA (CMO5U34)-methyltr 99.4 4.9E-13 1.7E-17 126.9 12.6 108 158-274 68-177 (261)
34 2ozv_A Hypothetical protein AT 99.4 9.8E-13 3.3E-17 124.3 14.6 133 159-297 35-187 (260)
35 1zx0_A Guanidinoacetate N-meth 99.4 6.1E-13 2.1E-17 123.0 11.7 110 159-274 59-169 (236)
36 3u81_A Catechol O-methyltransf 99.4 2.2E-12 7.6E-17 118.2 15.4 150 159-324 57-214 (221)
37 3ckk_A TRNA (guanine-N(7)-)-me 99.4 7.8E-13 2.7E-17 123.5 12.2 119 159-277 45-170 (235)
38 3cbg_A O-methyltransferase; cy 99.4 2.9E-12 9.8E-17 118.8 16.0 148 159-322 71-231 (232)
39 3lpm_A Putative methyltransfer 99.4 3.3E-12 1.1E-16 120.1 16.3 127 160-295 49-191 (259)
40 3e05_A Precorrin-6Y C5,15-meth 99.4 3.6E-12 1.2E-16 114.9 15.6 120 159-295 39-158 (204)
41 2ift_A Putative methylase HI07 99.4 4.5E-13 1.5E-17 121.6 9.3 108 160-275 53-163 (201)
42 2hnk_A SAM-dependent O-methylt 99.4 1.4E-12 4.8E-17 120.9 12.7 149 159-323 59-231 (239)
43 3mti_A RRNA methylase; SAM-dep 99.4 4.8E-12 1.6E-16 112.0 15.6 110 159-275 21-135 (185)
44 3hm2_A Precorrin-6Y C5,15-meth 99.4 3.5E-12 1.2E-16 111.5 14.4 104 159-275 24-127 (178)
45 4hg2_A Methyltransferase type 99.4 4.2E-13 1.4E-17 127.2 8.6 98 159-275 38-135 (257)
46 2igt_A SAM dependent methyltra 99.4 2.7E-12 9.1E-17 126.1 14.1 112 159-274 152-271 (332)
47 2frn_A Hypothetical protein PH 99.4 3.9E-12 1.3E-16 121.4 14.4 145 159-319 124-271 (278)
48 2fhp_A Methylase, putative; al 99.4 4.5E-13 1.5E-17 118.2 7.3 119 147-276 33-155 (187)
49 2esr_A Methyltransferase; stru 99.4 7.6E-13 2.6E-17 116.4 8.4 108 159-276 30-139 (177)
50 3fpf_A Mtnas, putative unchara 99.4 3.5E-12 1.2E-16 123.3 13.0 104 156-275 118-222 (298)
51 1xdz_A Methyltransferase GIDB; 99.4 1.3E-11 4.4E-16 114.6 16.4 149 159-323 69-219 (240)
52 2vdv_E TRNA (guanine-N(7)-)-me 99.4 4.1E-12 1.4E-16 118.5 12.9 117 160-276 49-174 (246)
53 2fpo_A Methylase YHHF; structu 99.4 2.1E-12 7.2E-17 117.2 10.6 105 160-275 54-160 (202)
54 3njr_A Precorrin-6Y methylase; 99.4 1.7E-11 5.7E-16 111.6 15.9 117 159-295 54-170 (204)
55 3eey_A Putative rRNA methylase 99.4 8.8E-12 3E-16 111.4 13.8 113 159-275 21-139 (197)
56 2gpy_A O-methyltransferase; st 99.4 4.1E-12 1.4E-16 117.0 11.9 106 159-274 53-159 (233)
57 3f4k_A Putative methyltransfer 99.4 7E-12 2.4E-16 116.4 13.5 106 159-275 45-150 (257)
58 3dlc_A Putative S-adenosyl-L-m 99.3 4.8E-12 1.6E-16 113.8 12.0 105 160-274 43-147 (219)
59 4dzr_A Protein-(glutamine-N5) 99.3 2.1E-12 7.4E-17 115.8 9.6 152 159-323 29-205 (215)
60 3kkz_A Uncharacterized protein 99.3 5.2E-12 1.8E-16 118.6 12.3 106 159-275 45-150 (267)
61 3evz_A Methyltransferase; NYSG 99.3 4.2E-12 1.4E-16 116.3 11.0 127 159-295 54-196 (230)
62 3dtn_A Putative methyltransfer 99.3 1.2E-11 4.1E-16 113.4 13.8 105 159-274 43-147 (234)
63 3g89_A Ribosomal RNA small sub 99.3 1.4E-11 4.7E-16 116.0 14.4 149 159-323 79-229 (249)
64 2b78_A Hypothetical protein SM 99.3 8E-12 2.7E-16 124.9 12.9 133 159-297 211-350 (385)
65 3mb5_A SAM-dependent methyltra 99.3 7.8E-12 2.7E-16 116.4 11.8 118 159-295 92-210 (255)
66 3hem_A Cyclopropane-fatty-acyl 99.3 1.1E-11 3.7E-16 118.8 13.0 108 159-275 71-183 (302)
67 1ws6_A Methyltransferase; stru 99.3 3.3E-12 1.1E-16 110.8 8.6 103 160-275 41-147 (171)
68 4dcm_A Ribosomal RNA large sub 99.3 9.6E-12 3.3E-16 124.0 11.9 134 149-297 214-349 (375)
69 3g5l_A Putative S-adenosylmeth 99.3 2.2E-11 7.6E-16 113.0 13.0 106 159-278 43-148 (253)
70 3ofk_A Nodulation protein S; N 99.3 1.1E-11 3.6E-16 112.4 10.5 127 159-297 50-181 (216)
71 1vl5_A Unknown conserved prote 99.3 1.7E-11 5.7E-16 114.5 12.0 114 146-274 26-139 (260)
72 2b3t_A Protein methyltransfera 99.3 3.5E-11 1.2E-15 114.0 14.3 145 159-321 108-274 (276)
73 1pjz_A Thiopurine S-methyltran 99.3 4E-12 1.4E-16 115.4 7.4 108 159-271 21-136 (203)
74 3dli_A Methyltransferase; PSI- 99.3 2E-11 6.8E-16 112.8 12.2 103 159-277 40-142 (240)
75 3lbf_A Protein-L-isoaspartate 99.3 2.6E-11 8.8E-16 109.5 12.6 110 146-276 66-175 (210)
76 3jwg_A HEN1, methyltransferase 99.3 3.4E-11 1.2E-15 109.3 13.5 112 159-274 28-140 (219)
77 3mgg_A Methyltransferase; NYSG 99.3 2E-11 6.8E-16 114.8 12.3 107 159-275 36-142 (276)
78 1nt2_A Fibrillarin-like PRE-rR 99.3 6E-11 2E-15 108.6 14.9 103 159-274 56-160 (210)
79 1g8a_A Fibrillarin-like PRE-rR 99.3 1.4E-10 4.7E-15 106.2 17.3 116 146-274 59-177 (227)
80 3jwh_A HEN1; methyltransferase 99.3 2.2E-11 7.7E-16 110.6 11.7 112 159-274 28-140 (217)
81 1ve3_A Hypothetical protein PH 99.3 1.5E-11 5.2E-16 111.6 10.6 106 159-275 37-142 (227)
82 1jsx_A Glucose-inhibited divis 99.3 7.7E-12 2.6E-16 112.5 8.5 101 160-275 65-165 (207)
83 3sm3_A SAM-dependent methyltra 99.3 7.1E-11 2.4E-15 107.4 14.9 111 159-274 29-140 (235)
84 2bm8_A Cephalosporin hydroxyla 99.3 8.1E-12 2.8E-16 116.5 8.8 100 160-275 81-187 (236)
85 1l3i_A Precorrin-6Y methyltran 99.3 5.9E-11 2E-15 104.3 13.5 120 159-296 32-152 (192)
86 3e23_A Uncharacterized protein 99.3 7E-11 2.4E-15 106.6 14.3 146 159-322 42-201 (211)
87 3g07_A 7SK snRNA methylphospha 99.3 1.9E-11 6.5E-16 117.1 11.1 116 160-275 46-220 (292)
88 4htf_A S-adenosylmethionine-de 99.3 2.4E-11 8.1E-16 115.1 11.6 108 159-276 67-174 (285)
89 2gb4_A Thiopurine S-methyltran 99.3 2.5E-11 8.4E-16 114.6 11.5 110 159-273 67-189 (252)
90 3a27_A TYW2, uncharacterized p 99.3 4.9E-11 1.7E-15 113.5 13.6 123 159-296 118-241 (272)
91 2ex4_A Adrenal gland protein A 99.3 1.3E-11 4.5E-16 114.0 9.3 106 160-274 79-184 (241)
92 2b25_A Hypothetical protein; s 99.2 2.4E-11 8.1E-16 118.6 11.3 123 159-294 104-234 (336)
93 3dh0_A SAM dependent methyltra 99.2 1.8E-11 6E-16 111.0 9.6 115 147-274 27-142 (219)
94 1nkv_A Hypothetical protein YJ 99.2 2.7E-11 9.1E-16 112.4 11.0 105 159-274 35-139 (256)
95 3grz_A L11 mtase, ribosomal pr 99.2 2.3E-11 7.9E-16 109.5 10.2 100 159-274 59-158 (205)
96 2yxd_A Probable cobalt-precorr 99.2 2.3E-10 7.7E-15 99.9 16.3 124 146-295 24-147 (183)
97 3ujc_A Phosphoethanolamine N-m 99.2 2.6E-11 8.8E-16 112.6 10.6 107 158-275 53-159 (266)
98 3hnr_A Probable methyltransfer 99.2 3E-11 1E-15 109.5 10.7 112 146-275 34-145 (220)
99 3bus_A REBM, methyltransferase 99.2 6E-11 2.1E-15 111.2 13.1 107 159-275 60-166 (273)
100 2xvm_A Tellurite resistance pr 99.2 3.8E-11 1.3E-15 106.6 11.1 104 159-273 31-134 (199)
101 3gu3_A Methyltransferase; alph 99.2 4.8E-11 1.6E-15 113.5 12.4 108 158-277 20-128 (284)
102 1kpg_A CFA synthase;, cyclopro 99.2 6.1E-11 2.1E-15 112.3 13.1 105 159-275 63-168 (287)
103 3g5t_A Trans-aconitate 3-methy 99.2 3.5E-11 1.2E-15 115.0 11.3 108 159-273 35-147 (299)
104 3dmg_A Probable ribosomal RNA 99.2 3.1E-11 1.1E-15 120.7 11.4 122 160-297 233-355 (381)
105 2p7i_A Hypothetical protein; p 99.2 2.9E-11 9.9E-16 110.7 10.2 101 159-276 41-142 (250)
106 4dmg_A Putative uncharacterize 99.2 8.7E-11 3E-15 117.9 14.3 121 160-288 214-339 (393)
107 3k6r_A Putative transferase PH 99.2 1.1E-10 3.9E-15 111.9 14.2 145 159-319 124-271 (278)
108 2p35_A Trans-aconitate 2-methy 99.2 3.1E-11 1E-15 112.0 9.9 111 147-276 23-133 (259)
109 1fbn_A MJ fibrillarin homologu 99.2 1E-10 3.4E-15 107.9 13.2 104 158-274 72-177 (230)
110 1nv8_A HEMK protein; class I a 99.2 6.9E-11 2.4E-15 113.3 12.6 108 160-275 123-249 (284)
111 2nxc_A L11 mtase, ribosomal pr 99.2 8.2E-11 2.8E-15 110.6 12.7 134 159-321 119-253 (254)
112 3h2b_A SAM-dependent methyltra 99.2 4.9E-11 1.7E-15 106.9 10.7 100 161-275 42-141 (203)
113 3lcc_A Putative methyl chlorid 99.2 2.9E-11 1E-15 111.1 9.4 104 161-274 67-170 (235)
114 1xxl_A YCGJ protein; structura 99.2 5.6E-11 1.9E-15 109.9 11.3 104 159-274 20-123 (239)
115 2pxx_A Uncharacterized protein 99.2 1.7E-11 6E-16 110.0 7.6 108 159-275 41-159 (215)
116 3i9f_A Putative type 11 methyl 99.2 1.3E-10 4.3E-15 101.3 12.8 96 159-274 16-111 (170)
117 2yqz_A Hypothetical protein TT 99.2 6.6E-11 2.3E-15 109.8 11.6 103 159-274 38-140 (263)
118 3ocj_A Putative exported prote 99.2 1.9E-11 6.6E-16 117.4 8.0 110 159-275 117-227 (305)
119 3l8d_A Methyltransferase; stru 99.2 7.9E-11 2.7E-15 108.1 11.8 102 159-275 52-153 (242)
120 3bkw_A MLL3908 protein, S-aden 99.2 8.4E-11 2.9E-15 107.8 11.9 105 159-277 42-146 (243)
121 2yvl_A TRMI protein, hypotheti 99.2 6.9E-11 2.4E-15 109.0 11.4 102 159-276 90-191 (248)
122 3e8s_A Putative SAM dependent 99.2 2E-10 6.8E-15 103.7 14.2 101 159-276 51-153 (227)
123 1xtp_A LMAJ004091AAA; SGPP, st 99.2 5.4E-11 1.9E-15 110.0 10.6 106 159-275 92-197 (254)
124 1o54_A SAM-dependent O-methylt 99.2 8.5E-11 2.9E-15 111.3 12.1 117 159-294 111-228 (277)
125 3ou2_A SAM-dependent methyltra 99.2 8.4E-11 2.9E-15 105.9 11.5 103 159-276 45-147 (218)
126 3c0k_A UPF0064 protein YCCW; P 99.2 9.9E-11 3.4E-15 117.1 13.1 122 159-283 219-347 (396)
127 2as0_A Hypothetical protein PH 99.2 6.8E-11 2.3E-15 118.2 11.8 124 160-287 217-347 (396)
128 2o57_A Putative sarcosine dime 99.2 7.5E-11 2.6E-15 112.2 11.4 107 159-275 81-187 (297)
129 1wxx_A TT1595, hypothetical pr 99.2 8E-11 2.7E-15 117.3 12.1 118 160-283 209-333 (382)
130 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1E-10 3.5E-15 108.5 12.1 117 159-294 95-213 (258)
131 3vc1_A Geranyl diphosphate 2-C 99.2 4.5E-11 1.5E-15 115.2 9.9 106 159-275 116-221 (312)
132 3m70_A Tellurite resistance pr 99.2 7E-11 2.4E-15 111.9 10.9 103 160-274 120-222 (286)
133 3ggd_A SAM-dependent methyltra 99.2 6.5E-11 2.2E-15 109.3 10.4 105 159-274 55-162 (245)
134 3d2l_A SAM-dependent methyltra 99.2 4.7E-11 1.6E-15 109.5 9.3 106 159-277 32-139 (243)
135 2fk8_A Methoxy mycolic acid sy 99.2 1.4E-10 4.7E-15 111.7 13.0 106 159-275 89-194 (318)
136 4fsd_A Arsenic methyltransfera 99.2 6.5E-11 2.2E-15 117.8 10.9 112 159-274 82-202 (383)
137 2vdw_A Vaccinia virus capping 99.2 5.7E-11 1.9E-15 115.0 10.1 115 159-276 47-170 (302)
138 3q7e_A Protein arginine N-meth 99.2 6.1E-11 2.1E-15 116.8 10.2 111 159-277 65-175 (349)
139 1yb2_A Hypothetical protein TA 99.2 8.1E-11 2.8E-15 111.6 10.7 103 159-276 109-212 (275)
140 3cgg_A SAM-dependent methyltra 99.2 2E-10 6.9E-15 101.0 12.6 102 159-275 45-147 (195)
141 2pjd_A Ribosomal RNA small sub 99.2 3.7E-11 1.3E-15 117.9 8.5 117 147-275 186-303 (343)
142 2p8j_A S-adenosylmethionine-de 99.2 4.4E-11 1.5E-15 107.4 8.2 119 145-275 10-128 (209)
143 3pfg_A N-methyltransferase; N, 99.2 4.8E-11 1.6E-15 111.5 8.7 101 159-274 49-150 (263)
144 1wzn_A SAM-dependent methyltra 99.2 6.9E-11 2.3E-15 109.5 9.6 105 159-275 40-145 (252)
145 4df3_A Fibrillarin-like rRNA/T 99.2 1.6E-10 5.6E-15 108.0 12.0 130 156-297 73-210 (233)
146 1dl5_A Protein-L-isoaspartate 99.2 1.6E-10 5.5E-15 112.0 12.4 112 146-276 64-176 (317)
147 3tma_A Methyltransferase; thum 99.2 1.1E-10 3.7E-15 114.8 11.2 112 159-276 202-318 (354)
148 2qm3_A Predicted methyltransfe 99.2 7.8E-11 2.7E-15 117.0 10.3 101 160-270 172-272 (373)
149 3r0q_C Probable protein argini 99.2 1.1E-10 3.7E-15 116.2 11.3 109 159-276 62-170 (376)
150 2yxe_A Protein-L-isoaspartate 99.2 1.8E-10 6E-15 104.3 11.6 111 146-275 66-177 (215)
151 3ccf_A Cyclopropane-fatty-acyl 99.2 2.2E-10 7.4E-15 108.3 12.6 99 159-275 56-154 (279)
152 2kw5_A SLR1183 protein; struct 99.2 1.3E-10 4.6E-15 104.0 10.4 100 163-275 32-131 (202)
153 3ajd_A Putative methyltransfer 99.2 2.9E-10 9.9E-15 108.1 13.3 117 159-279 82-215 (274)
154 1ri5_A MRNA capping enzyme; me 99.1 6.1E-11 2.1E-15 112.1 8.3 111 159-276 63-175 (298)
155 2yx1_A Hypothetical protein MJ 99.1 1.9E-10 6.5E-15 112.8 12.1 114 159-296 194-307 (336)
156 2ipx_A RRNA 2'-O-methyltransfe 99.1 1.7E-10 5.9E-15 106.2 11.1 105 158-274 75-181 (233)
157 3thr_A Glycine N-methyltransfe 99.1 5.8E-11 2E-15 112.6 8.2 117 159-277 56-177 (293)
158 3v97_A Ribosomal RNA large sub 99.1 1.8E-10 6.2E-15 123.6 12.8 114 160-277 539-659 (703)
159 1i9g_A Hypothetical protein RV 99.1 1.9E-10 6.5E-15 108.4 11.4 119 159-294 98-218 (280)
160 1vbf_A 231AA long hypothetical 99.1 3.2E-10 1.1E-14 103.7 12.3 107 146-275 59-165 (231)
161 2fyt_A Protein arginine N-meth 99.1 2.9E-10 9.8E-15 111.7 12.7 107 159-273 63-169 (340)
162 3g2m_A PCZA361.24; SAM-depende 99.1 6.1E-11 2.1E-15 113.3 7.5 120 146-277 72-192 (299)
163 3gdh_A Trimethylguanosine synt 99.1 1.6E-11 5.3E-16 113.4 3.2 103 160-274 78-180 (241)
164 1i1n_A Protein-L-isoaspartate 99.1 2.5E-10 8.4E-15 104.3 11.1 118 145-275 63-182 (226)
165 1y8c_A S-adenosylmethionine-de 99.1 8.4E-11 2.9E-15 107.7 7.9 108 159-277 36-144 (246)
166 3kr9_A SAM-dependent methyltra 99.1 1.4E-10 4.9E-15 107.9 9.2 107 159-276 14-120 (225)
167 3bxo_A N,N-dimethyltransferase 99.1 1.4E-10 4.9E-15 106.0 9.0 102 159-275 39-141 (239)
168 3m33_A Uncharacterized protein 99.1 7.6E-11 2.6E-15 108.3 7.1 92 159-272 47-139 (226)
169 2pbf_A Protein-L-isoaspartate 99.1 2.3E-10 7.9E-15 104.5 10.3 105 159-275 79-193 (227)
170 1o9g_A RRNA methyltransferase; 99.1 5.1E-11 1.7E-15 111.1 5.8 113 160-273 51-212 (250)
171 2qe6_A Uncharacterized protein 99.1 1E-09 3.5E-14 104.5 14.9 108 160-275 77-196 (274)
172 3uwp_A Histone-lysine N-methyl 99.1 1.9E-10 6.6E-15 115.6 10.2 121 146-274 162-287 (438)
173 1jg1_A PIMT;, protein-L-isoasp 99.1 2.9E-10 9.8E-15 105.0 10.6 111 146-276 80-190 (235)
174 1r18_A Protein-L-isoaspartate( 99.1 2E-10 6.9E-15 105.3 9.4 117 146-275 71-194 (227)
175 1wy7_A Hypothetical protein PH 99.1 2.4E-09 8.2E-14 96.2 16.3 101 159-274 48-148 (207)
176 3dou_A Ribosomal RNA large sub 99.1 6.7E-10 2.3E-14 100.2 12.6 150 146-322 13-180 (191)
177 1ej0_A FTSJ; methyltransferase 99.1 4.2E-10 1.4E-14 97.0 10.7 130 147-297 11-154 (180)
178 2h00_A Methyltransferase 10 do 99.1 4.6E-11 1.6E-15 111.4 4.7 82 160-244 65-150 (254)
179 2gs9_A Hypothetical protein TT 99.1 3.1E-10 1.1E-14 102.3 9.7 98 160-276 36-133 (211)
180 1ne2_A Hypothetical protein TA 99.1 6.6E-10 2.3E-14 99.6 11.8 97 158-273 49-145 (200)
181 3gnl_A Uncharacterized protein 99.1 2.4E-10 8.1E-15 107.6 9.2 106 159-275 20-125 (244)
182 3bgv_A MRNA CAP guanine-N7 met 99.1 1.5E-10 5E-15 111.5 7.9 116 159-275 33-155 (313)
183 2avn_A Ubiquinone/menaquinone 99.1 2.2E-10 7.4E-15 107.3 8.6 103 159-279 53-156 (260)
184 3id6_C Fibrillarin-like rRNA/T 99.1 6.5E-10 2.2E-14 103.9 11.8 112 151-274 67-180 (232)
185 3lec_A NADB-rossmann superfami 99.1 2.9E-10 1E-14 106.1 9.3 106 159-275 20-125 (230)
186 3q87_B N6 adenine specific DNA 99.1 6E-10 2.1E-14 98.1 10.8 96 160-275 23-123 (170)
187 3p2e_A 16S rRNA methylase; met 99.1 1E-10 3.5E-15 108.3 6.1 110 159-273 23-137 (225)
188 3fzg_A 16S rRNA methylase; met 99.1 1.7E-10 5.7E-15 104.8 7.3 112 145-273 39-150 (200)
189 2qy6_A UPF0209 protein YFCK; s 99.1 3.6E-10 1.2E-14 107.2 9.9 148 160-323 60-247 (257)
190 1g6q_1 HnRNP arginine N-methyl 99.1 3.8E-10 1.3E-14 110.1 10.4 109 159-275 37-145 (328)
191 3cc8_A Putative methyltransfer 99.1 4E-10 1.4E-14 101.9 9.7 101 159-276 31-131 (230)
192 1ixk_A Methyltransferase; open 99.1 6.2E-10 2.1E-14 108.2 11.5 114 159-278 117-249 (315)
193 3dp7_A SAM-dependent methyltra 99.1 4.8E-10 1.6E-14 110.7 10.9 109 159-274 178-286 (363)
194 2y1w_A Histone-arginine methyl 99.1 6.7E-10 2.3E-14 109.2 11.6 109 159-277 49-157 (348)
195 2plw_A Ribosomal RNA methyltra 99.1 6.5E-10 2.2E-14 99.3 10.5 120 159-297 21-172 (201)
196 4hc4_A Protein arginine N-meth 99.1 3.3E-10 1.1E-14 113.1 9.3 108 160-276 83-190 (376)
197 3bkx_A SAM-dependent methyltra 99.1 5.5E-10 1.9E-14 104.7 10.3 119 147-275 33-159 (275)
198 3gwz_A MMCR; methyltransferase 99.0 3.3E-09 1.1E-13 104.9 16.2 106 159-274 201-306 (369)
199 3iv6_A Putative Zn-dependent a 99.0 9.1E-10 3.1E-14 104.6 11.5 105 159-276 44-149 (261)
200 1u2z_A Histone-lysine N-methyl 99.0 7.5E-10 2.6E-14 112.3 11.2 108 159-274 241-358 (433)
201 3ege_A Putative methyltransfer 99.0 6.8E-10 2.3E-14 104.0 10.1 98 159-275 33-130 (261)
202 3mq2_A 16S rRNA methyltransfer 99.0 5.6E-10 1.9E-14 101.3 8.4 113 159-274 26-139 (218)
203 3i53_A O-methyltransferase; CO 99.0 1.3E-09 4.3E-14 105.9 11.2 106 159-274 168-273 (332)
204 3mcz_A O-methyltransferase; ad 99.0 9.3E-10 3.2E-14 107.4 10.3 107 161-274 180-286 (352)
205 2aot_A HMT, histamine N-methyl 99.0 1E-09 3.5E-14 104.6 10.2 111 160-275 52-172 (292)
206 1p91_A Ribosomal RNA large sub 99.0 5E-10 1.7E-14 104.9 7.8 95 159-275 84-178 (269)
207 2dul_A N(2),N(2)-dimethylguano 99.0 1E-09 3.4E-14 109.6 10.0 104 160-274 47-163 (378)
208 1qzz_A RDMB, aclacinomycin-10- 99.0 1.5E-09 5E-14 106.8 11.1 106 159-274 181-286 (374)
209 2ip2_A Probable phenazine-spec 99.0 1.4E-09 4.8E-14 105.4 10.6 103 162-274 169-271 (334)
210 3m6w_A RRNA methylase; rRNA me 99.0 2.5E-09 8.7E-14 109.4 12.8 114 159-278 100-232 (464)
211 2i62_A Nicotinamide N-methyltr 99.0 1.6E-10 5.6E-15 107.2 3.6 115 159-274 55-197 (265)
212 2a14_A Indolethylamine N-methy 99.0 1E-10 3.5E-15 110.1 2.1 113 160-274 55-196 (263)
213 2nyu_A Putative ribosomal RNA 99.0 2.7E-09 9.3E-14 94.7 11.1 120 159-297 21-163 (196)
214 3axs_A Probable N(2),N(2)-dime 99.0 1.2E-09 4.2E-14 109.5 9.6 104 160-275 52-158 (392)
215 2ih2_A Modification methylase 99.0 1.1E-09 3.8E-14 109.3 9.2 121 159-295 38-184 (421)
216 3hp7_A Hemolysin, putative; st 99.0 2.1E-09 7.2E-14 103.6 10.8 128 128-274 54-184 (291)
217 1tw3_A COMT, carminomycin 4-O- 99.0 1.8E-09 6E-14 105.8 10.5 106 159-274 182-287 (360)
218 1sqg_A SUN protein, FMU protei 99.0 2.4E-09 8.4E-14 108.2 11.3 115 159-278 245-377 (429)
219 3m4x_A NOL1/NOP2/SUN family pr 98.9 3.2E-09 1.1E-13 108.4 11.7 115 159-278 104-237 (456)
220 2r3s_A Uncharacterized protein 98.9 1.6E-09 5.5E-14 104.7 8.9 107 159-274 164-270 (335)
221 3bt7_A TRNA (uracil-5-)-methyl 98.9 5.8E-09 2E-13 103.4 13.0 102 161-278 214-329 (369)
222 2f8l_A Hypothetical protein LM 98.9 2E-09 6.8E-14 105.5 9.5 128 160-295 130-276 (344)
223 1x19_A CRTF-related protein; m 98.9 4.5E-09 1.5E-13 103.1 11.5 105 159-273 189-293 (359)
224 2yxl_A PH0851 protein, 450AA l 98.9 3.5E-09 1.2E-13 107.8 11.0 116 159-278 258-392 (450)
225 2g72_A Phenylethanolamine N-me 98.9 3.9E-10 1.3E-14 107.1 3.6 114 160-274 71-214 (289)
226 2frx_A Hypothetical protein YE 98.9 6.7E-09 2.3E-13 106.7 12.9 114 160-278 117-249 (479)
227 3sso_A Methyltransferase; macr 98.9 1.4E-09 4.9E-14 109.0 7.5 108 145-274 205-323 (419)
228 3bzb_A Uncharacterized protein 98.9 5.5E-09 1.9E-13 99.6 10.8 109 159-273 78-203 (281)
229 3b3j_A Histone-arginine methyl 98.9 1.8E-09 6.3E-14 110.9 8.0 108 159-276 157-264 (480)
230 3tm4_A TRNA (guanine N2-)-meth 98.9 4.5E-09 1.5E-13 104.4 10.4 101 159-265 216-321 (373)
231 2wa2_A Non-structural protein 98.9 1.6E-09 5.5E-14 103.6 6.3 146 159-322 81-235 (276)
232 1vlm_A SAM-dependent methyltra 98.9 3.8E-09 1.3E-13 96.1 8.4 92 161-275 48-139 (219)
233 3cvo_A Methyltransferase-like 98.9 1.7E-08 5.9E-13 92.3 12.5 101 159-273 29-152 (202)
234 4e2x_A TCAB9; kijanose, tetron 98.9 2.3E-09 7.7E-14 107.3 6.9 103 159-275 106-208 (416)
235 3htx_A HEN1; HEN1, small RNA m 98.9 1.1E-08 3.7E-13 110.3 12.5 111 160-275 721-834 (950)
236 2oxt_A Nucleoside-2'-O-methylt 98.8 3.2E-09 1.1E-13 100.9 7.1 126 159-297 73-205 (265)
237 1uwv_A 23S rRNA (uracil-5-)-me 98.8 1.4E-08 4.9E-13 102.8 11.8 113 145-274 274-388 (433)
238 3lst_A CALO1 methyltransferase 98.8 1.2E-08 4.1E-13 99.9 10.9 103 159-274 183-285 (348)
239 3opn_A Putative hemolysin; str 98.8 9.6E-09 3.3E-13 95.6 9.5 115 141-274 20-136 (232)
240 1zq9_A Probable dimethyladenos 98.8 1.4E-08 4.9E-13 97.1 10.4 88 145-244 16-103 (285)
241 2jjq_A Uncharacterized RNA met 98.8 1.7E-08 5.6E-13 102.3 11.2 99 159-275 289-387 (425)
242 4a6d_A Hydroxyindole O-methylt 98.8 2.7E-08 9.3E-13 97.9 12.4 105 159-274 178-282 (353)
243 3lcv_B Sisomicin-gentamicin re 98.8 3.5E-09 1.2E-13 100.4 5.3 112 146-273 123-234 (281)
244 2p41_A Type II methyltransfera 98.8 6.6E-09 2.3E-13 100.7 6.6 125 159-298 81-212 (305)
245 3giw_A Protein of unknown func 98.8 4.6E-08 1.6E-12 93.5 12.3 122 147-275 67-200 (277)
246 3gru_A Dimethyladenosine trans 98.7 3.8E-08 1.3E-12 95.0 11.1 86 146-244 39-124 (295)
247 3reo_A (ISO)eugenol O-methyltr 98.7 1.8E-08 6.1E-13 99.7 8.6 98 159-274 202-299 (368)
248 3ldu_A Putative methylase; str 98.7 2.5E-08 8.4E-13 99.7 8.8 113 159-277 194-346 (385)
249 2zfu_A Nucleomethylin, cerebra 98.7 3.6E-08 1.2E-12 88.9 9.2 126 159-324 66-192 (215)
250 3p9c_A Caffeic acid O-methyltr 98.7 2.6E-08 8.9E-13 98.4 8.9 98 159-274 200-297 (364)
251 1fp1_D Isoliquiritigenin 2'-O- 98.7 1.7E-08 5.8E-13 99.7 7.5 98 159-274 208-305 (372)
252 2xyq_A Putative 2'-O-methyl tr 98.7 6E-08 2.1E-12 93.4 10.9 108 145-274 46-170 (290)
253 1m6y_A S-adenosyl-methyltransf 98.7 8E-08 2.7E-12 93.0 11.7 91 145-243 14-107 (301)
254 3ldg_A Putative uncharacterize 98.7 4.8E-08 1.6E-12 97.7 10.4 111 159-275 193-343 (384)
255 1fp2_A Isoflavone O-methyltran 98.7 2.7E-08 9.1E-13 97.4 8.4 98 159-274 187-287 (352)
256 1af7_A Chemotaxis receptor met 98.7 2E-08 6.9E-13 96.0 7.2 110 160-273 105-250 (274)
257 3k0b_A Predicted N6-adenine-sp 98.7 3.1E-08 1.1E-12 99.2 8.9 111 159-275 200-350 (393)
258 4azs_A Methyltransferase WBDD; 98.7 4.3E-08 1.5E-12 102.6 10.2 77 159-241 65-141 (569)
259 3fut_A Dimethyladenosine trans 98.7 1.1E-07 3.7E-12 90.8 11.5 87 146-246 36-122 (271)
260 3ll7_A Putative methyltransfer 98.7 2.8E-08 9.5E-13 100.1 7.3 81 161-245 94-174 (410)
261 2b9e_A NOL1/NOP2/SUN domain fa 98.6 1.1E-07 3.7E-12 92.3 11.0 115 159-278 101-237 (309)
262 2h1r_A Dimethyladenosine trans 98.6 4E-08 1.4E-12 94.7 7.9 87 145-244 30-116 (299)
263 2okc_A Type I restriction enzy 98.6 5E-08 1.7E-12 99.0 8.6 113 160-277 171-309 (445)
264 2r6z_A UPF0341 protein in RSP 98.6 2.5E-08 8.4E-13 94.4 5.7 82 160-246 83-173 (258)
265 3tqs_A Ribosomal RNA small sub 98.6 1.2E-07 4.2E-12 89.5 10.1 86 146-243 18-105 (255)
266 3frh_A 16S rRNA methylase; met 98.6 6.4E-08 2.2E-12 90.8 7.9 101 159-273 104-204 (253)
267 2wk1_A NOVP; transferase, O-me 98.6 1.2E-07 4E-12 91.0 8.2 108 159-274 105-243 (282)
268 1qam_A ERMC' methyltransferase 98.6 4E-07 1.4E-11 85.0 11.6 86 146-244 19-104 (244)
269 2oyr_A UPF0341 protein YHIQ; a 98.5 6.4E-08 2.2E-12 91.7 5.8 83 162-247 90-177 (258)
270 1zg3_A Isoflavanone 4'-O-methy 98.5 1.3E-07 4.6E-12 92.6 7.7 97 160-274 193-292 (358)
271 3ftd_A Dimethyladenosine trans 98.5 4.5E-07 1.5E-11 85.2 10.7 109 146-275 20-131 (249)
272 1yub_A Ermam, rRNA methyltrans 98.5 6E-09 2.1E-13 97.1 -2.4 116 145-274 17-144 (245)
273 3vyw_A MNMC2; tRNA wobble urid 98.5 1.5E-06 5.2E-11 84.1 14.3 143 162-323 98-260 (308)
274 2ld4_A Anamorsin; methyltransf 98.5 2E-07 6.9E-12 81.6 6.6 90 158-274 10-100 (176)
275 3khk_A Type I restriction-modi 98.5 1.8E-07 6.1E-12 97.5 7.3 135 159-297 243-419 (544)
276 3v97_A Ribosomal RNA large sub 98.4 5.3E-07 1.8E-11 96.7 9.6 115 159-276 189-348 (703)
277 2ar0_A M.ecoki, type I restric 98.4 5.8E-07 2E-11 93.6 9.4 134 160-296 169-334 (541)
278 3lkd_A Type I restriction-modi 98.4 1.7E-06 5.9E-11 90.0 12.4 135 160-296 221-380 (542)
279 4fzv_A Putative methyltransfer 98.4 3.2E-06 1.1E-10 83.7 13.6 135 159-294 147-305 (359)
280 2oo3_A Protein involved in cat 98.3 1.3E-06 4.3E-11 83.6 9.4 123 160-296 91-217 (283)
281 3s1s_A Restriction endonucleas 98.3 1.8E-06 6.1E-11 93.0 11.0 136 160-296 321-488 (878)
282 3uzu_A Ribosomal RNA small sub 98.3 2.3E-06 7.8E-11 81.8 9.0 87 146-243 31-123 (279)
283 1qyr_A KSGA, high level kasuga 98.3 1.4E-06 4.8E-11 82.1 7.3 89 145-244 9-100 (252)
284 3evf_A RNA-directed RNA polyme 98.2 2.1E-06 7.2E-11 81.7 8.1 161 146-323 63-227 (277)
285 4gqb_A Protein arginine N-meth 98.2 2.1E-06 7.1E-11 90.8 7.4 108 161-277 358-469 (637)
286 3gcz_A Polyprotein; flavivirus 98.1 3E-06 1E-10 80.7 6.6 161 146-323 79-244 (282)
287 1wg8_A Predicted S-adenosylmet 98.1 1.5E-05 5E-10 76.2 10.9 85 146-243 11-98 (285)
288 3ua3_A Protein arginine N-meth 98.1 4.4E-06 1.5E-10 88.7 7.6 113 161-279 410-538 (745)
289 3eld_A Methyltransferase; flav 97.9 4.1E-05 1.4E-09 73.4 10.7 160 146-323 70-234 (300)
290 3ps9_A TRNA 5-methylaminomethy 97.8 7.7E-05 2.6E-09 79.1 11.7 113 162-275 68-219 (676)
291 3pvc_A TRNA 5-methylaminomethy 97.7 9E-05 3.1E-09 78.9 10.4 114 161-275 59-211 (689)
292 2px2_A Genome polyprotein [con 97.6 0.00033 1.1E-08 65.9 10.9 138 144-298 60-204 (269)
293 3r24_A NSP16, 2'-O-methyl tran 97.5 0.00035 1.2E-08 66.9 9.6 149 144-321 91-255 (344)
294 4auk_A Ribosomal RNA large sub 97.5 0.00042 1.4E-08 68.6 10.6 84 146-244 192-280 (375)
295 3ufb_A Type I restriction-modi 97.5 0.00067 2.3E-08 70.3 12.1 157 160-323 217-413 (530)
296 3p8z_A Mtase, non-structural p 97.5 0.00078 2.7E-08 62.7 11.0 142 142-298 63-207 (267)
297 1i4w_A Mitochondrial replicati 97.4 0.00017 5.8E-09 71.1 6.5 59 161-226 59-117 (353)
298 3tos_A CALS11; methyltransfera 97.4 0.0012 4.2E-08 62.2 11.8 142 159-313 68-250 (257)
299 3lkz_A Non-structural protein 97.3 0.00097 3.3E-08 63.9 9.5 143 142-298 79-225 (321)
300 3tka_A Ribosomal RNA small sub 97.2 0.00094 3.2E-08 65.3 9.4 76 159-242 56-136 (347)
301 1g55_A DNA cytosine methyltran 97.1 0.0034 1.2E-07 61.4 11.6 151 161-324 2-170 (343)
302 2efj_A 3,7-dimethylxanthine me 97.1 0.0023 7.8E-08 63.7 10.3 109 161-275 53-225 (384)
303 3b5i_A S-adenosyl-L-methionine 97.1 0.002 6.9E-08 63.9 9.8 129 147-275 37-225 (374)
304 2k4m_A TR8_protein, UPF0146 pr 96.8 0.00071 2.4E-08 58.5 3.7 60 159-239 34-94 (153)
305 2zig_A TTHA0409, putative modi 96.8 0.0012 4.2E-08 62.9 5.4 47 159-207 234-280 (297)
306 1f8f_A Benzyl alcohol dehydrog 96.7 0.003 1E-07 61.7 7.7 100 159-275 189-289 (371)
307 1m6e_X S-adenosyl-L-methionnin 96.7 0.0018 6.3E-08 63.8 6.0 115 158-275 49-209 (359)
308 2c7p_A Modification methylase 96.7 0.052 1.8E-06 52.6 16.3 147 161-323 11-173 (327)
309 3g7u_A Cytosine-specific methy 96.6 0.015 5E-07 57.7 11.7 148 162-323 3-172 (376)
310 3m6i_A L-arabinitol 4-dehydrog 96.5 0.016 5.4E-07 56.3 11.1 99 159-275 178-283 (363)
311 1pl8_A Human sorbitol dehydrog 96.5 0.008 2.7E-07 58.4 8.9 97 159-275 170-273 (356)
312 4ej6_A Putative zinc-binding d 96.4 0.0063 2.2E-07 59.6 8.1 101 158-275 180-284 (370)
313 3fpc_A NADP-dependent alcohol 96.3 0.0071 2.4E-07 58.6 7.6 100 159-275 165-266 (352)
314 3s2e_A Zinc-containing alcohol 96.3 0.0068 2.3E-07 58.4 7.4 98 159-275 165-263 (340)
315 1boo_A Protein (N-4 cytosine-s 96.3 0.0084 2.9E-07 57.9 7.9 67 212-278 11-87 (323)
316 3uko_A Alcohol dehydrogenase c 96.1 0.012 4.2E-07 57.5 8.1 102 159-275 192-295 (378)
317 4h0n_A DNMT2; SAH binding, tra 96.1 0.093 3.2E-06 51.0 14.0 155 162-329 4-175 (333)
318 1eg2_A Modification methylase 96.0 0.015 5.1E-07 56.2 8.0 65 213-277 36-108 (319)
319 4eez_A Alcohol dehydrogenase 1 95.9 0.033 1.1E-06 53.5 9.9 100 159-275 162-263 (348)
320 2dph_A Formaldehyde dismutase; 95.8 0.012 4.2E-07 58.0 6.8 109 159-275 184-299 (398)
321 1cdo_A Alcohol dehydrogenase; 95.8 0.036 1.2E-06 54.0 10.0 102 159-275 191-294 (374)
322 2b5w_A Glucose dehydrogenase; 95.8 0.031 1E-06 54.2 9.4 94 162-275 174-273 (357)
323 1g60_A Adenine-specific methyl 95.8 0.015 5.1E-07 54.2 6.9 61 215-275 4-74 (260)
324 2jhf_A Alcohol dehydrogenase E 95.8 0.023 8E-07 55.4 8.3 102 159-275 190-293 (374)
325 1p0f_A NADP-dependent alcohol 95.7 0.019 6.4E-07 56.0 7.6 97 159-275 190-293 (373)
326 3jv7_A ADH-A; dehydrogenase, n 95.7 0.028 9.4E-07 54.2 8.5 99 159-275 170-270 (345)
327 2fzw_A Alcohol dehydrogenase c 95.7 0.044 1.5E-06 53.3 10.0 102 159-275 189-292 (373)
328 1e3i_A Alcohol dehydrogenase, 95.7 0.021 7.2E-07 55.7 7.6 102 159-275 194-297 (376)
329 2zig_A TTHA0409, putative modi 95.6 0.015 5.1E-07 55.3 6.0 64 213-276 19-98 (297)
330 1e3j_A NADP(H)-dependent ketos 95.6 0.03 1E-06 54.1 8.3 99 159-275 167-271 (352)
331 3ip1_A Alcohol dehydrogenase, 95.6 0.092 3.1E-06 51.8 11.9 101 159-275 212-318 (404)
332 1pqw_A Polyketide synthase; ro 95.5 0.029 9.9E-07 49.3 7.4 98 159-275 37-137 (198)
333 3ubt_Y Modification methylase 95.5 0.33 1.1E-05 46.2 15.4 147 163-324 2-164 (331)
334 4dvj_A Putative zinc-dependent 95.5 0.066 2.3E-06 52.1 10.6 97 160-274 171-269 (363)
335 1g60_A Adenine-specific methyl 95.5 0.014 4.6E-07 54.5 5.1 46 159-206 211-256 (260)
336 4b7c_A Probable oxidoreductase 95.4 0.024 8.2E-07 54.3 6.7 100 158-275 147-248 (336)
337 3qv2_A 5-cytosine DNA methyltr 95.4 0.16 5.5E-06 49.2 12.6 153 160-324 9-181 (327)
338 1vj0_A Alcohol dehydrogenase, 95.3 0.036 1.2E-06 54.3 7.7 97 159-275 194-298 (380)
339 3fwz_A Inner membrane protein 95.3 0.072 2.5E-06 44.4 8.6 96 161-275 7-105 (140)
340 2d8a_A PH0655, probable L-thre 95.2 0.029 9.8E-07 54.2 6.7 99 160-275 167-267 (348)
341 2dq4_A L-threonine 3-dehydroge 95.2 0.034 1.2E-06 53.5 7.1 98 160-275 164-262 (343)
342 1kol_A Formaldehyde dehydrogen 95.1 0.051 1.7E-06 53.4 8.2 109 159-275 184-300 (398)
343 4a2c_A Galactitol-1-phosphate 95.0 0.067 2.3E-06 51.2 8.6 100 159-275 159-260 (346)
344 3fbg_A Putative arginate lyase 94.9 0.12 4.2E-06 49.7 10.3 97 160-275 150-248 (346)
345 1v3u_A Leukotriene B4 12- hydr 94.9 0.048 1.6E-06 52.1 7.4 98 159-275 144-244 (333)
346 1uuf_A YAHK, zinc-type alcohol 94.8 0.1 3.5E-06 50.9 9.5 95 159-275 193-288 (369)
347 1rjw_A ADH-HT, alcohol dehydro 94.8 0.046 1.6E-06 52.6 6.9 98 159-275 163-261 (339)
348 2c0c_A Zinc binding alcohol de 94.8 0.057 1.9E-06 52.5 7.5 98 159-275 162-261 (362)
349 2h6e_A ADH-4, D-arabinose 1-de 94.7 0.075 2.6E-06 51.1 8.2 95 160-275 170-269 (344)
350 3uog_A Alcohol dehydrogenase; 94.7 0.053 1.8E-06 52.7 7.2 95 159-275 188-287 (363)
351 1pjc_A Protein (L-alanine dehy 94.7 0.2 6.9E-06 48.8 11.3 101 160-275 166-267 (361)
352 4eye_A Probable oxidoreductase 94.5 0.063 2.1E-06 51.7 7.0 96 159-274 158-256 (342)
353 2hcy_A Alcohol dehydrogenase 1 94.4 0.056 1.9E-06 52.1 6.5 99 159-275 168-269 (347)
354 3me5_A Cytosine-specific methy 94.4 0.44 1.5E-05 48.6 13.4 124 162-294 89-249 (482)
355 2j3h_A NADP-dependent oxidored 94.4 0.06 2E-06 51.6 6.6 99 159-275 154-255 (345)
356 3gms_A Putative NADPH:quinone 94.3 0.041 1.4E-06 52.9 5.3 99 158-275 142-243 (340)
357 3two_A Mannitol dehydrogenase; 94.3 0.099 3.4E-06 50.3 8.0 91 158-275 174-265 (348)
358 3qwb_A Probable quinone oxidor 94.3 0.048 1.6E-06 52.2 5.7 98 159-275 147-247 (334)
359 2zb4_A Prostaglandin reductase 94.2 0.067 2.3E-06 51.7 6.6 99 159-274 157-259 (357)
360 3jyn_A Quinone oxidoreductase; 94.0 0.049 1.7E-06 52.0 5.0 98 159-275 139-239 (325)
361 1id1_A Putative potassium chan 94.0 0.27 9.2E-06 41.3 9.2 100 161-277 3-107 (153)
362 4dup_A Quinone oxidoreductase; 93.9 0.065 2.2E-06 51.9 5.8 98 159-275 166-265 (353)
363 2vhw_A Alanine dehydrogenase; 93.9 0.35 1.2E-05 47.4 11.2 101 160-275 167-268 (377)
364 1jvb_A NAD(H)-dependent alcoho 93.9 0.065 2.2E-06 51.6 5.7 99 159-275 169-271 (347)
365 3gaz_A Alcohol dehydrogenase s 93.7 0.17 6E-06 48.6 8.4 96 158-275 148-246 (343)
366 2eih_A Alcohol dehydrogenase; 93.6 0.13 4.5E-06 49.3 7.3 98 159-275 165-265 (343)
367 3l9w_A Glutathione-regulated p 93.6 0.2 6.9E-06 50.0 8.8 95 161-274 4-101 (413)
368 2qrv_A DNA (cytosine-5)-methyl 93.5 0.12 4.2E-06 49.3 6.8 74 160-243 15-92 (295)
369 3swr_A DNA (cytosine-5)-methyl 93.4 3.3 0.00011 45.9 18.7 152 161-324 540-723 (1002)
370 3c85_A Putative glutathione-re 93.4 0.33 1.1E-05 41.9 8.8 95 161-275 39-139 (183)
371 1wly_A CAAR, 2-haloacrylate re 93.2 0.17 5.8E-06 48.3 7.3 98 159-275 144-244 (333)
372 3gqv_A Enoyl reductase; medium 93.1 0.25 8.4E-06 48.1 8.4 97 159-274 163-262 (371)
373 1yqd_A Sinapyl alcohol dehydro 93.1 0.35 1.2E-05 46.9 9.4 95 160-275 187-282 (366)
374 1yb5_A Quinone oxidoreductase; 93.0 0.2 6.8E-06 48.4 7.5 98 159-275 169-269 (351)
375 3p2y_A Alanine dehydrogenase/p 93.0 0.32 1.1E-05 48.2 9.0 108 160-274 183-301 (381)
376 2cdc_A Glucose dehydrogenase g 92.8 0.22 7.6E-06 48.2 7.5 93 161-275 181-278 (366)
377 3goh_A Alcohol dehydrogenase, 92.8 0.13 4.4E-06 48.7 5.7 88 158-274 140-228 (315)
378 2eez_A Alanine dehydrogenase; 92.7 0.67 2.3E-05 45.2 11.0 101 160-275 165-266 (369)
379 3llv_A Exopolyphosphatase-rela 92.7 0.57 1.9E-05 38.5 9.0 70 161-243 6-79 (141)
380 3dfz_A SIRC, precorrin-2 dehyd 92.6 0.51 1.7E-05 43.2 9.2 104 147-278 17-124 (223)
381 4dio_A NAD(P) transhydrogenase 92.5 0.49 1.7E-05 47.2 9.8 110 160-275 189-312 (405)
382 3nx4_A Putative oxidoreductase 92.5 0.19 6.5E-06 47.6 6.5 91 163-275 149-241 (324)
383 2cf5_A Atccad5, CAD, cinnamyl 92.5 0.27 9.3E-06 47.5 7.7 95 160-275 180-275 (357)
384 2g1u_A Hypothetical protein TM 92.4 0.26 8.9E-06 41.6 6.7 101 159-277 17-120 (155)
385 2j8z_A Quinone oxidoreductase; 92.4 0.22 7.4E-06 48.1 6.9 98 159-275 161-261 (354)
386 1qor_A Quinone oxidoreductase; 92.4 0.16 5.3E-06 48.4 5.7 98 159-275 139-239 (327)
387 3ggo_A Prephenate dehydrogenas 92.3 1.5 5.2E-05 41.7 12.7 92 161-274 33-127 (314)
388 1piw_A Hypothetical zinc-type 92.3 0.17 5.7E-06 49.0 5.9 97 159-275 178-276 (360)
389 1iz0_A Quinone oxidoreductase; 92.3 0.32 1.1E-05 45.6 7.8 91 159-274 124-217 (302)
390 2vz8_A Fatty acid synthase; tr 92.2 0.033 1.1E-06 67.5 0.9 101 162-274 1242-1347(2512)
391 1boo_A Protein (N-4 cytosine-s 91.9 0.071 2.4E-06 51.4 2.7 62 159-227 251-312 (323)
392 3l4b_C TRKA K+ channel protien 91.6 0.75 2.6E-05 40.9 9.1 94 163-275 2-99 (218)
393 1lss_A TRK system potassium up 91.4 2.7 9.1E-05 33.7 11.5 92 161-273 4-101 (140)
394 3k96_A Glycerol-3-phosphate de 91.0 2.3 8E-05 41.3 12.6 140 161-322 29-181 (356)
395 2py6_A Methyltransferase FKBM; 90.9 0.43 1.5E-05 47.4 7.4 48 159-206 225-274 (409)
396 1x13_A NAD(P) transhydrogenase 90.9 0.62 2.1E-05 46.2 8.4 42 160-202 171-213 (401)
397 3krt_A Crotonyl COA reductase; 90.8 0.61 2.1E-05 46.6 8.4 104 159-274 227-343 (456)
398 1xa0_A Putative NADPH dependen 90.8 0.22 7.6E-06 47.3 4.9 93 163-275 152-246 (328)
399 1l7d_A Nicotinamide nucleotide 90.7 0.88 3E-05 44.6 9.3 42 160-202 171-213 (384)
400 2y0c_A BCEC, UDP-glucose dehyd 90.6 2.6 8.8E-05 42.7 12.9 109 159-275 6-128 (478)
401 2aef_A Calcium-gated potassium 90.5 1.7 5.7E-05 39.0 10.4 96 160-277 8-107 (234)
402 3iht_A S-adenosyl-L-methionine 90.5 0.26 8.9E-06 42.8 4.5 104 159-273 39-145 (174)
403 4a0s_A Octenoyl-COA reductase/ 90.3 0.48 1.7E-05 47.1 7.1 99 158-275 218-336 (447)
404 3gg2_A Sugar dehydrogenase, UD 90.2 5.6 0.00019 39.9 14.9 139 162-311 3-158 (450)
405 3pqe_A L-LDH, L-lactate dehydr 90.0 4 0.00014 39.3 13.1 108 159-278 3-124 (326)
406 2o3j_A UDP-glucose 6-dehydroge 90.0 3.4 0.00011 41.8 13.2 108 162-275 10-135 (481)
407 3oig_A Enoyl-[acyl-carrier-pro 89.7 3 0.0001 37.8 11.5 78 160-243 6-96 (266)
408 1tt7_A YHFP; alcohol dehydroge 89.4 0.45 1.5E-05 45.2 5.7 91 163-275 153-247 (330)
409 1jw9_B Molybdopterin biosynthe 89.2 0.68 2.3E-05 42.7 6.7 33 161-194 31-65 (249)
410 4a27_A Synaptic vesicle membra 89.2 0.37 1.3E-05 46.3 5.1 96 159-275 141-238 (349)
411 1ldn_A L-lactate dehydrogenase 89.1 6.7 0.00023 37.2 13.9 110 160-278 5-125 (316)
412 3av4_A DNA (cytosine-5)-methyl 88.9 11 0.00039 42.9 17.5 151 161-323 851-1033(1330)
413 3h7a_A Short chain dehydrogena 88.8 3.3 0.00011 37.5 11.1 78 160-243 6-92 (252)
414 3grk_A Enoyl-(acyl-carrier-pro 88.7 6.6 0.00023 36.4 13.4 107 160-274 30-168 (293)
415 1wma_A Carbonyl reductase [NAD 88.7 2.4 8.1E-05 38.1 10.0 78 160-243 3-91 (276)
416 3lyl_A 3-oxoacyl-(acyl-carrier 88.6 5.1 0.00017 35.7 12.1 78 160-243 4-91 (247)
417 4a7p_A UDP-glucose dehydrogena 88.6 5.3 0.00018 40.1 13.3 141 159-311 6-161 (446)
418 3d0o_A L-LDH 1, L-lactate dehy 88.6 4.5 0.00016 38.5 12.3 110 160-278 5-125 (317)
419 1zcj_A Peroxisomal bifunctiona 88.6 2.9 0.0001 42.0 11.4 101 161-275 37-150 (463)
420 2vn8_A Reticulon-4-interacting 88.6 0.78 2.7E-05 44.5 7.0 97 159-275 182-280 (375)
421 3ado_A Lambda-crystallin; L-gu 88.1 2 6.9E-05 41.3 9.4 107 158-277 3-125 (319)
422 3o38_A Short chain dehydrogena 87.7 4.5 0.00015 36.6 11.3 78 160-243 21-110 (266)
423 3imf_A Short chain dehydrogena 87.6 4.3 0.00015 36.8 11.0 77 161-243 6-92 (257)
424 3ic5_A Putative saccharopine d 87.4 7.9 0.00027 29.7 11.2 68 161-242 5-77 (118)
425 3h8v_A Ubiquitin-like modifier 87.3 0.65 2.2E-05 44.2 5.3 34 160-194 35-70 (292)
426 1a5z_A L-lactate dehydrogenase 87.2 6 0.0002 37.5 12.2 102 163-273 2-114 (319)
427 3tjr_A Short chain dehydrogena 87.0 5.7 0.0002 37.0 11.8 79 160-244 30-118 (301)
428 3sju_A Keto reductase; short-c 86.9 6.1 0.00021 36.3 11.8 78 160-243 23-110 (279)
429 1lnq_A MTHK channels, potassiu 86.8 3.1 0.00011 39.5 9.9 93 161-275 115-211 (336)
430 3ijr_A Oxidoreductase, short c 86.8 6.2 0.00021 36.5 11.9 109 160-274 46-181 (291)
431 4e12_A Diketoreductase; oxidor 86.6 1.8 6.1E-05 40.3 7.9 103 161-276 4-122 (283)
432 4e21_A 6-phosphogluconate dehy 86.6 4.5 0.00015 39.3 11.1 92 161-275 22-115 (358)
433 1eg2_A Modification methylase 86.5 0.63 2.2E-05 44.7 4.8 48 158-207 240-290 (319)
434 3h2s_A Putative NADH-flavin re 86.4 3.8 0.00013 35.7 9.7 99 163-274 2-103 (224)
435 4ft4_B DNA (cytosine-5)-methyl 86.4 18 0.00062 38.5 16.7 44 162-205 213-261 (784)
436 4g65_A TRK system potassium up 86.3 2.7 9.4E-05 42.3 9.7 75 159-244 233-310 (461)
437 1y6j_A L-lactate dehydrogenase 86.3 3.2 0.00011 39.6 9.7 108 160-278 6-125 (318)
438 3hdj_A Probable ornithine cycl 86.3 2.5 8.7E-05 40.3 9.0 92 158-273 118-211 (313)
439 3guy_A Short-chain dehydrogena 86.1 6.3 0.00022 34.8 11.1 72 162-243 2-81 (230)
440 1zud_1 Adenylyltransferase THI 86.1 1.4 4.8E-05 40.6 6.8 34 161-194 28-62 (251)
441 2dpo_A L-gulonate 3-dehydrogen 85.9 3.2 0.00011 39.7 9.5 103 161-276 6-124 (319)
442 2v6b_A L-LDH, L-lactate dehydr 85.9 7.7 0.00026 36.5 12.1 102 163-273 2-114 (304)
443 3o8q_A Shikimate 5-dehydrogena 85.9 20 0.00068 33.5 14.8 95 133-244 100-197 (281)
444 3v2g_A 3-oxoacyl-[acyl-carrier 85.8 12 0.00043 34.1 13.3 118 147-274 21-164 (271)
445 3tqh_A Quinone oxidoreductase; 85.8 2.7 9.2E-05 39.6 8.8 91 159-274 151-244 (321)
446 3o26_A Salutaridine reductase; 85.7 1.8 6.3E-05 39.8 7.5 79 160-243 11-100 (311)
447 4dkj_A Cytosine-specific methy 85.7 8.6 0.00029 38.1 12.7 45 162-206 11-60 (403)
448 2g5c_A Prephenate dehydrogenas 85.7 5.7 0.00019 36.4 10.9 90 162-273 2-94 (281)
449 3pxx_A Carveol dehydrogenase; 85.5 11 0.00039 34.1 12.8 78 160-243 9-108 (287)
450 3rkr_A Short chain oxidoreduct 85.3 5.7 0.00019 36.0 10.6 78 160-243 28-115 (262)
451 3cea_A MYO-inositol 2-dehydrog 85.3 7 0.00024 36.9 11.6 72 160-244 7-81 (346)
452 3f1l_A Uncharacterized oxidore 85.1 8 0.00027 34.8 11.4 79 160-243 11-101 (252)
453 2q3e_A UDP-glucose 6-dehydroge 84.9 9.3 0.00032 38.2 12.8 108 162-275 6-131 (467)
454 3eod_A Protein HNR; response r 84.8 7.5 0.00026 30.2 9.9 77 184-272 7-83 (130)
455 1f0y_A HCDH, L-3-hydroxyacyl-C 84.8 3.4 0.00012 38.6 9.0 102 161-275 15-136 (302)
456 3ucx_A Short chain dehydrogena 84.7 12 0.00042 33.8 12.5 77 160-242 10-96 (264)
457 3r1i_A Short-chain type dehydr 84.7 5.7 0.00019 36.6 10.3 78 160-243 31-118 (276)
458 1ez4_A Lactate dehydrogenase; 84.6 8.2 0.00028 36.7 11.7 109 161-278 5-123 (318)
459 3mog_A Probable 3-hydroxybutyr 84.5 2.4 8.2E-05 43.0 8.2 103 161-277 5-122 (483)
460 1rjd_A PPM1P, carboxy methyl t 84.4 4.9 0.00017 38.7 10.1 107 161-272 98-229 (334)
461 3oj0_A Glutr, glutamyl-tRNA re 84.4 5.9 0.0002 32.5 9.4 84 161-273 21-108 (144)
462 3vku_A L-LDH, L-lactate dehydr 84.4 10 0.00035 36.3 12.3 110 159-278 7-127 (326)
463 3l77_A Short-chain alcohol deh 84.4 9.4 0.00032 33.6 11.4 78 161-243 2-89 (235)
464 4hkt_A Inositol 2-dehydrogenas 84.4 10 0.00034 35.7 12.2 67 162-244 4-73 (331)
465 2xxj_A L-LDH, L-lactate dehydr 84.3 11 0.00039 35.5 12.5 105 163-278 2-118 (310)
466 4e6p_A Probable sorbitol dehyd 84.2 15 0.00052 33.0 13.0 76 160-244 7-92 (259)
467 2ae2_A Protein (tropinone redu 84.2 6.5 0.00022 35.5 10.4 78 160-243 8-96 (260)
468 1yb1_A 17-beta-hydroxysteroid 84.2 13 0.00045 33.7 12.6 78 160-243 30-117 (272)
469 3dqp_A Oxidoreductase YLBE; al 83.7 4.9 0.00017 35.1 9.1 67 163-244 2-73 (219)
470 3ioy_A Short-chain dehydrogena 83.6 14 0.00047 34.7 12.8 81 160-244 7-97 (319)
471 1lld_A L-lactate dehydrogenase 83.6 16 0.00053 34.1 13.1 101 160-273 6-122 (319)
472 4g65_A TRK system potassium up 83.6 3.7 0.00013 41.3 9.1 70 161-242 3-76 (461)
473 2rhc_B Actinorhodin polyketide 83.5 14 0.00049 33.6 12.6 77 161-243 22-108 (277)
474 2uyo_A Hypothetical protein ML 83.5 3.9 0.00013 39.0 8.8 112 160-276 102-219 (310)
475 3pk0_A Short-chain dehydrogena 83.5 8.4 0.00029 34.9 10.9 79 160-243 9-97 (262)
476 1h2b_A Alcohol dehydrogenase; 83.4 1.2 4.2E-05 42.8 5.3 94 159-275 185-285 (359)
477 2zqz_A L-LDH, L-lactate dehydr 83.4 10 0.00036 36.1 11.9 110 160-278 8-127 (326)
478 3i1j_A Oxidoreductase, short c 83.3 8.7 0.0003 34.1 10.7 79 160-243 13-103 (247)
479 4fn4_A Short chain dehydrogena 83.3 12 0.0004 34.5 11.8 78 160-243 6-93 (254)
480 3u5t_A 3-oxoacyl-[acyl-carrier 83.2 9.3 0.00032 34.9 11.1 108 160-275 26-161 (267)
481 3t4x_A Oxidoreductase, short c 83.1 11 0.00037 34.2 11.5 78 160-243 9-94 (267)
482 3ce6_A Adenosylhomocysteinase; 83.0 7.2 0.00025 39.7 11.1 89 159-275 272-361 (494)
483 3tum_A Shikimate dehydrogenase 82.9 29 0.00099 32.2 14.4 70 133-204 99-169 (269)
484 1mld_A Malate dehydrogenase; o 82.9 11 0.00038 35.6 11.8 106 163-279 2-120 (314)
485 4aj2_A L-lactate dehydrogenase 82.8 17 0.00058 34.9 13.1 107 160-275 18-136 (331)
486 3rih_A Short chain dehydrogena 82.8 5.4 0.00018 37.2 9.4 79 160-243 40-128 (293)
487 3q2i_A Dehydrogenase; rossmann 82.8 9.1 0.00031 36.4 11.3 71 160-244 12-85 (354)
488 1ae1_A Tropinone reductase-I; 82.8 16 0.00055 33.1 12.6 78 160-243 20-108 (273)
489 4ibo_A Gluconate dehydrogenase 82.7 6.1 0.00021 36.3 9.6 78 160-243 25-112 (271)
490 2i6t_A Ubiquitin-conjugating e 82.7 5.6 0.00019 37.7 9.6 99 161-273 14-123 (303)
491 3lf2_A Short chain oxidoreduct 82.6 13 0.00045 33.6 11.8 80 160-243 7-96 (265)
492 3kto_A Response regulator rece 82.6 6.2 0.00021 31.2 8.6 78 185-272 7-84 (136)
493 4imr_A 3-oxoacyl-(acyl-carrier 82.6 6.4 0.00022 36.2 9.8 79 160-244 32-119 (275)
494 3pi7_A NADH oxidoreductase; gr 82.6 0.88 3E-05 43.5 3.9 95 162-275 166-263 (349)
495 3tfo_A Putative 3-oxoacyl-(acy 82.5 8.6 0.00029 35.2 10.6 77 161-243 4-90 (264)
496 4iin_A 3-ketoacyl-acyl carrier 82.5 9.6 0.00033 34.6 10.9 78 160-243 28-116 (271)
497 3rui_A Ubiquitin-like modifier 82.4 3.2 0.00011 40.3 7.8 34 160-194 33-68 (340)
498 4fc7_A Peroxisomal 2,4-dienoyl 82.4 9.9 0.00034 34.8 11.0 79 160-243 26-114 (277)
499 3n74_A 3-ketoacyl-(acyl-carrie 82.4 14 0.00049 33.0 11.9 73 160-243 8-92 (261)
500 3ezy_A Dehydrogenase; structur 82.3 8.6 0.0003 36.4 10.9 69 162-244 3-74 (344)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=3.8e-67 Score=507.40 Aligned_cols=272 Identities=34% Similarity=0.644 Sum_probs=244.1
Q ss_pred CcceeeccceEEEEEeCCCeeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHH
Q 016578 97 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLR 176 (387)
Q Consensus 97 g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~ 176 (387)
+.+++++++++||+++|+||+|.|++++.+|++|+|||.+|++++||+.|||||+|+|++.|++|++||+||+|+|++++
T Consensus 20 ~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~r 99 (294)
T 3o4f_A 20 QFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLR 99 (294)
T ss_dssp SEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHHH
T ss_pred CcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeEEEECCCchHHHH
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceEEEEeCCHHHHHHHHhhcccccC-CCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchH
Q 016578 177 EISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEK 255 (387)
Q Consensus 177 el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~-~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ 255 (387)
++++|+++++|++||||++|+++|+++|+.++. .++|||++++++|+++|++.. +++||+||+|++||.+++..||++
T Consensus 100 evlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~-~~~yDvIi~D~~dp~~~~~~L~t~ 178 (294)
T 3o4f_A 100 EVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISDCTDPIGPGESLFTS 178 (294)
T ss_dssp HHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-SCCEEEEEESCCCCCCTTCCSSCC
T ss_pred HHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-cccCCEEEEeCCCcCCCchhhcCH
Confidence 999999999999999999999999999998765 478999999999999999765 578999999999999999999999
Q ss_pred HHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCc
Q 016578 256 PFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINP 335 (387)
Q Consensus 256 ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~ 335 (387)
+||+.++++|+|||++++|++++|++.+.+..+.++++++|+ .+.+++++|||||+|.|||++|||+.++.++. .+
T Consensus 179 eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~-~v~~~~~~vPty~~g~w~f~~as~~~~~~~~~---~~ 254 (294)
T 3o4f_A 179 AFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAWATDNDALRHLS---TE 254 (294)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCS-EEEEEEECCTTSSSSCEEEEEEESCTTGGGCC---HH
T ss_pred HHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCC-ceeeeeeeeccCCCcceeheeEECCCccccCC---hH
Confidence 999999999999999999999999999999999999999999 78999999999999999999999875433221 11
Q ss_pred hhhhhccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhcC
Q 016578 336 IEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVL 374 (387)
Q Consensus 336 ~~~~~~~~~~~~~l~yy~~~~h~aaF~lP~~~~~~l~~~ 374 (387)
.. ..+......++||||+++|+|||+||+|+|++|+.+
T Consensus 255 ~~-~~~~~~~~~~~~yyn~~~h~aaF~lP~~~~~~l~~e 292 (294)
T 3o4f_A 255 II-QARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQ 292 (294)
T ss_dssp HH-HHHHHSSCCCCSSCCHHHHHHHTCCCHHHHHHTTSS
T ss_pred HH-hHHHHhhCCCceEECHHHHHHHccCcHHHHHHHhcC
Confidence 11 011123456899999999999999999999999764
No 2
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=1.4e-56 Score=435.30 Aligned_cols=271 Identities=34% Similarity=0.655 Sum_probs=226.2
Q ss_pred CcceeeccceEEEEEeCCCeeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHH
Q 016578 97 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLR 176 (387)
Q Consensus 97 g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~ 176 (387)
|++++++++++|++++|+||+|.|++++.+|++|++||.+|++++|++.|+||++|++++.++++++|||||||+|++++
T Consensus 20 ~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 99 (294)
T 3adn_A 20 QFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLR 99 (294)
T ss_dssp SEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEEEESCTTCHHHH
T ss_pred CceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEEEEeCChhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceEEEEeCCHHHHHHHHhhcccccC-CCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchH
Q 016578 177 EISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEK 255 (387)
Q Consensus 177 el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~-~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ 255 (387)
+++++.+..+|++||||+++++.|+++++..+. .++++|++++++|++++++.. +++||+||+|+++|.++...+++.
T Consensus 100 ~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fDvIi~D~~~p~~~~~~l~~~ 178 (294)
T 3adn_A 100 EVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISDCTDPIGPGESLFTS 178 (294)
T ss_dssp HHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-CCCEEEEEECC----------CCH
T ss_pred HHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-CCCccEEEECCCCccCcchhccHH
Confidence 999998789999999999999999999987643 367899999999999998753 568999999999999888899999
Q ss_pred HHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCc
Q 016578 256 PFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINP 335 (387)
Q Consensus 256 ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~ 335 (387)
+||+.++++|+|||++++|+++++...+.+..+.++++++|+ .+.+++..+|+||+|.|||++||++.++.++ |
T Consensus 179 ~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vp~~p~g~~~f~~as~~~~~~~~--~--- 252 (294)
T 3adn_A 179 AFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAWATDNDALRHL--S--- 252 (294)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCS-EEEEEEEECTTSSSSEEEEEEEESCTTCSCC--H---
T ss_pred HHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCC-CeEEEEEEecccCCCceEEEEEeCCcccccC--C---
Confidence 999999999999999999999999988899999999999999 7888999999999999999999987443322 1
Q ss_pred hhhhh-ccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhcC
Q 016578 336 IEKLE-GADKHKRELRFYNSEIHSAAFALPAFLKREVSVL 374 (387)
Q Consensus 336 ~~~~~-~~~~~~~~l~yy~~~~h~aaF~lP~~~~~~l~~~ 374 (387)
.+.+. +......++||||+++|+|+|+||+|++++|+..
T Consensus 253 ~~~~~~~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~~ 292 (294)
T 3adn_A 253 TEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQ 292 (294)
T ss_dssp HHHCCCCCC----CCSSCCHHHHHHTTCCCHHHHHHCCCC
T ss_pred HHHHHHHHhccCCCCeEECHHHHHHHhcCcHHHHHHhhcc
Confidence 11121 1112234799999999999999999999999653
No 3
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=100.00 E-value=8.7e-55 Score=429.82 Aligned_cols=300 Identities=67% Similarity=1.250 Sum_probs=259.9
Q ss_pred CccccccccccccccccccccCccccCcccccCCCCCchhhcccccccccccccCCCcceeeccceEEEEEeCCCeeEEE
Q 016578 41 PELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLV 120 (387)
Q Consensus 41 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~g~~~~~~v~~vl~~~~S~~q~I~v 120 (387)
++....+|..+.++||+|. .++|| |++++++++++||+++|+||+|.|
T Consensus 33 ~~~~~~~~~~~~~~w~~e~--------------~~~~~------------------~~~~~~~v~~vl~~~~s~~q~I~v 80 (334)
T 1xj5_A 33 QKKEPACFSTVIPGWFSEM--------------SPMWP------------------GEAHSLKVEKVLFQGKSDYQDVIV 80 (334)
T ss_dssp --------CCCCSSEEEEC--------------CTTST------------------TEEEEEEEEEEEEEEECSSCEEEE
T ss_pred CCCCCCCCcccccceEEEe--------------ccCCC------------------CceEEEEeeeEEEEeecCCeEEEE
Confidence 3444677889999999998 77899 999999999999999999999999
Q ss_pred EEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHH
Q 016578 121 FESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVS 200 (387)
Q Consensus 121 ~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~a 200 (387)
+++..+|+.|++||.+|++++|++.|+||++|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|
T Consensus 81 ~~~~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~A 160 (334)
T 1xj5_A 81 FQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVS 160 (334)
T ss_dssp EEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHH
T ss_pred EEcCCCCeEEEECCEeecCcCcchHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999888899999999999999999999997778999999999999999
Q ss_pred HhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccch
Q 016578 201 KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL 280 (387)
Q Consensus 201 r~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~ 280 (387)
+++++..+.++++++++++++|+.+++...++++||+||+|+++|.++...+++.+||+.++++|+|||+|+++++++|.
T Consensus 161 r~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 161 KQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp HHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred HHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 99997653345578999999999999875445689999999998888777788899999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCchhhhhccccCCCCCeeeCHHHHHHH
Q 016578 281 HTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAA 360 (387)
Q Consensus 281 ~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~l~yy~~~~h~aa 360 (387)
....+..+.+.++++|+..+.++++.+|+|++|.|||++||++.++.++.+|++.++... .. ...++||||+++|+||
T Consensus 241 ~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~as~~~~~~~~~~~~~~~~~~~-~~-~~~~~~yy~~~~h~~~ 318 (334)
T 1xj5_A 241 HMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPIDESS-SK-SNGPLKFYNAEIHSAA 318 (334)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEEECSSSCCCSSSCSSCCCSGG-GT-TTCCCSSCCHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCccccceEEEeCCcccCCceEEEEcccCCccccccCchhhhhhhh-hc-ccCCceEECHHHHHHH
Confidence 888888899999999996678888999999999999999999765566667765443211 11 3457999999999999
Q ss_pred hcCCHHHHHHhhcC
Q 016578 361 FALPAFLKREVSVL 374 (387)
Q Consensus 361 F~lP~~~~~~l~~~ 374 (387)
|+||+|+++.|+++
T Consensus 319 f~lp~~~~~~l~~~ 332 (334)
T 1xj5_A 319 FCLPSFAKKVIESK 332 (334)
T ss_dssp TCCCHHHHHHHC--
T ss_pred hcCcHHHHHHHhcc
Confidence 99999999999753
No 4
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=1.5e-54 Score=418.35 Aligned_cols=280 Identities=53% Similarity=0.931 Sum_probs=251.8
Q ss_pred ccccccccccCccccCcccccCCCCCchhhcccccccccccccCCCcceeeccceEEEEEeCCCeeEEEEEecCceeEEE
Q 016578 52 VSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLV 131 (387)
Q Consensus 52 ~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~ 131 (387)
.++||+|. ++.|| |++++++++++|++++|+||+|.|+++..+|++|+
T Consensus 2 ~~~w~~e~--------------~~~~~------------------~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ 49 (283)
T 2i7c_A 2 SKKWFSEF--------------SIMWP------------------GQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLV 49 (283)
T ss_dssp -CCEEEEC--------------CTTST------------------TCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEE
T ss_pred CceeEEEc--------------ccCCC------------------CceEEEecccEEEEEECCCccEEEEEcCCCCEEEE
Confidence 46899998 77899 99999999999999999999999999999999999
Q ss_pred EcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCC
Q 016578 132 LDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGF 211 (387)
Q Consensus 132 lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~ 211 (387)
+||.+|+++++++.|+||++|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++.++.++
T Consensus 50 ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~ 129 (283)
T 2i7c_A 50 LDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY 129 (283)
T ss_dssp ETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG
T ss_pred ECCEeeecccchhhHHHHHHHHHHhcCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcccc
Confidence 99999999999999999999999988999999999999999999999999778899999999999999999998764445
Q ss_pred CCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHH
Q 016578 212 EDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISI 291 (387)
Q Consensus 212 ~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~ 291 (387)
++++++++++|+.+++... +++||+||+|++++.++...+++.+|++.++++|+|||+++++..++|...+.+..+.++
T Consensus 130 ~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~ 208 (283)
T 2i7c_A 130 EDKRVNVFIEDASKFLENV-TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGY 208 (283)
T ss_dssp GSTTEEEEESCHHHHHHHC-CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHH
T ss_pred CCCcEEEEECChHHHHHhC-CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHH
Confidence 6789999999999998765 568999999999998888889999999999999999999999999999988889999999
Q ss_pred HHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCchhhhhccccCCCCCeeeCHHHHHHHhcCCHHHHHHh
Q 016578 292 CRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 371 (387)
Q Consensus 292 l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~l~yy~~~~h~aaF~lP~~~~~~l 371 (387)
++++|+ .+.++++.+|+||+|+|||++|||+ +.++.+|++.+... ....+||||+++|+|+|+||+|+++.|
T Consensus 209 l~~~F~-~v~~~~~~vP~y~~g~~g~~~~s~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~f~~p~~~~~~~ 280 (283)
T 2i7c_A 209 AKKLFK-KVEYANISIPTYPCGCIGILCCSKT--DTGLTKPNKKLESK-----EFADLKYYNYENHSAAFKLPAFLLKEI 280 (283)
T ss_dssp HHTTCS-EEEEEEEECTTSGGGEEEEEEEESS--TTCSSSCSSCCCSG-----GGTTCSSCCHHHHHHTTCCCHHHHHHH
T ss_pred HHHHCC-ceEEEEEEcCCcCCCcEEEEEEeCC--CccccCchhhhhhh-----hhhcCceECHHHHHHHhcCcHHHHHHh
Confidence 999999 7888899999999999999999987 33455665433211 112469999999999999999999998
Q ss_pred h
Q 016578 372 S 372 (387)
Q Consensus 372 ~ 372 (387)
+
T Consensus 281 ~ 281 (283)
T 2i7c_A 281 E 281 (283)
T ss_dssp T
T ss_pred h
Confidence 6
No 5
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=100.00 E-value=5.6e-55 Score=427.81 Aligned_cols=300 Identities=48% Similarity=0.904 Sum_probs=241.4
Q ss_pred cccccccccccc--------cC-ccccCccccc----CCCCCchhhcccccccccccccCCCcceeeccceEEEEEeCCC
Q 016578 49 STVVSGWFSESQ--------ST-SDKTGKTMYF----NNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEY 115 (387)
Q Consensus 49 ~~~~~~w~~~~~--------~~-~~~~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~g~~~~~~v~~vl~~~~S~~ 115 (387)
+.+.+|||+|.. .. -+|.+++.|+ .++.|| |+.++++++++|++++|+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~vl~~~~s~~ 63 (314)
T 2b2c_A 2 NKLHKGWFTEFSPDDLEKMNGASDEEPTKVLKSDGQEMGGAWP------------------GQAFSLQVKKVLFHEKSKY 63 (314)
T ss_dssp -CBCSSEEEEECSCCC-----------------------CCCT------------------TEEEEEEEEEEEEEEECSS
T ss_pred CcccccceEeeccccccccccccccccccccccccccccccCC------------------CceEEeecccEEEEEECCC
Confidence 456799999972 13 3788899985 467899 9999999999999999999
Q ss_pred eeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHH
Q 016578 116 QEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKM 195 (387)
Q Consensus 116 q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~ 195 (387)
|+|.|+++..+|+.|++||.+|+++++++.|+||++|++++.++++++||+||||+|.++++++++.+..+|++||+|+.
T Consensus 64 q~i~v~~~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~ 143 (314)
T 2b2c_A 64 QDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEM 143 (314)
T ss_dssp CEEEEEEETTTEEEEEETTEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHH
T ss_pred CCEEEEEcCCCCEEEEECCEeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHH
Confidence 99999999999999999999999999999999999999988888999999999999999999999977789999999999
Q ss_pred HHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 196 VIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 196 vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+++.|+++++..+.++++++++++.+|+.+++... +++||+||+|++++.++...+++.+||+.++++|+|||+++++.
T Consensus 144 ~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 144 VIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH-KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp HHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC-TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc-CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 99999999976533445789999999999998763 56899999999998887778888999999999999999999999
Q ss_pred cccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCchhhhhccccCCCCCeeeCHH
Q 016578 276 ESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSE 355 (387)
Q Consensus 276 ~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~l~yy~~~ 355 (387)
+++|.+...++.+.++++++|+ .+.++++.+|+||+|+|||++|+|+ +..++.+|++.+...+ . ...++||||++
T Consensus 223 ~~~~~~~~~~~~~~~~l~~vF~-~v~~~~~~iP~~~~g~~g~~~ask~-~~~~~~~~~~~~~~~~-~--~~~~~~yy~~~ 297 (314)
T 2b2c_A 223 ESVWLHLPLIAHLVAFNRKIFP-AVTYAQSIVSTYPSGSMGYLICAKN-ANRDVTTPARTLTAEQ-I--KALNLRFYNSE 297 (314)
T ss_dssp CCTTTCHHHHHHHHHHHHHHCS-EEEEEEEECTTSGGGEEEEEEEESS-TTCCTTSCSSCCCHHH-H--HHTTCSSCCHH
T ss_pred CCcccCHHHHHHHHHHHHHHCC-cceEEEEEecCcCCCceEEEEEeCC-CcccccCchhhhhHHh-h--cccCCeEECHH
Confidence 9999888889999999999999 7888999999999999999999987 3334556654432111 1 11279999999
Q ss_pred HHHHHhcCCHHHHHHhh
Q 016578 356 IHSAAFALPAFLKREVS 372 (387)
Q Consensus 356 ~h~aaF~lP~~~~~~l~ 372 (387)
+|+|+|+||+|++++|+
T Consensus 298 ~h~~~f~lp~~~~~~l~ 314 (314)
T 2b2c_A 298 VHKAAFVLPQFVKNALE 314 (314)
T ss_dssp HHHHTTCCCHHHHHTCC
T ss_pred HHHHHccCcHHHHHhhC
Confidence 99999999999999763
No 6
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=100.00 E-value=2.8e-54 Score=420.89 Aligned_cols=288 Identities=48% Similarity=0.971 Sum_probs=245.1
Q ss_pred ccccccccccccccCccccCcccccCCCCCchhhcccccccccccccCCCcceeeccceEEEEEeCCCeeEEEEEecCce
Q 016578 48 HSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYG 127 (387)
Q Consensus 48 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G 127 (387)
+..+.++||+|. .++|| |++++++++++||+++|+||+|.|++++.+|
T Consensus 15 ~~~~~~~w~~e~--------------~~~~~------------------~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g 62 (304)
T 2o07_A 15 PAAIREGWFRET--------------CSLWP------------------GQALSLQVEQLLHHRRSRYQDILVFRSKTYG 62 (304)
T ss_dssp ---CBTTEEEEC--------------CTTST------------------TEEEEEEEEEEEEEEECSSSEEEEEEESSSC
T ss_pred CcccccceEEEe--------------ccCCC------------------CceEEEEeccEEEEEECCCcEEEEEEcCCCc
Confidence 445678999998 67899 9999999999999999999999999999999
Q ss_pred eEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccc
Q 016578 128 KVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPEL 207 (387)
Q Consensus 128 ~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~ 207 (387)
++|++||.+|+++++++.|++|++|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++.+
T Consensus 63 ~~L~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~ 142 (304)
T 2o07_A 63 NVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGM 142 (304)
T ss_dssp EEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH
T ss_pred eEEEECCEEEeecccchHHHHHHHHHHHhhCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHh
Confidence 99999999999999999999999999988889999999999999999999999977789999999999999999999864
Q ss_pred cCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHH
Q 016578 208 AVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIED 287 (387)
Q Consensus 208 ~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~ 287 (387)
+.++++++++++++|+.+++... +++||+||+|++++.++...+++.+||+.++++|+|||+++++..++|.+....+.
T Consensus 143 ~~~~~~~rv~v~~~Da~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 221 (304)
T 2o07_A 143 AIGYSSSKLTLHVGDGFEFMKQN-QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKE 221 (304)
T ss_dssp HGGGGCTTEEEEESCHHHHHHTC-SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHH
T ss_pred hcccCCCcEEEEECcHHHHHhhC-CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHH
Confidence 33455789999999999998754 56899999999998887777888999999999999999999998889988888899
Q ss_pred HHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCchhhhhccccCCCCCeeeCHHHHHHHhcCCHHH
Q 016578 288 MISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFL 367 (387)
Q Consensus 288 ~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~l~yy~~~~h~aaF~lP~~~ 367 (387)
+.++++++|+ .+.++++.+|+||+|.|||++|||+ +..++..|+++++..+ ....++||||+++|+|+|+||+|+
T Consensus 222 ~~~~l~~~f~-~v~~~~~~vP~~~~g~~g~~~as~~-~~~~~~~~~~~~~~~~---~~~~~~~~y~~~~h~~~f~lp~~~ 296 (304)
T 2o07_A 222 MRQFCQSLFP-VVAYAYCTIPTYPSGQIGFMLCSKN-PSTNFQEPVQPLTQQQ---VAQMQLKYYNSDVHRAAFVLPEFA 296 (304)
T ss_dssp HHHHHHHHCS-EEEEEEEECTTSGGGEEEEEEEESS-TTCCSSSCSSCCCHHH---HHHTTCSSCCHHHHHHTTCCCHHH
T ss_pred HHHHHHHhCC-CceeEEEEeccccCcceEEEEEeCC-cccccccchhhhhHhh---hcccCCeEECHHHHHHHhcCcHHH
Confidence 9999999999 7889989999999999999999987 4445566654443211 111478999999999999999999
Q ss_pred HHHhhc
Q 016578 368 KREVSV 373 (387)
Q Consensus 368 ~~~l~~ 373 (387)
++.|++
T Consensus 297 ~~~~~~ 302 (304)
T 2o07_A 297 RKALND 302 (304)
T ss_dssp HHHHHC
T ss_pred HHHhhc
Confidence 999974
No 7
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=1.7e-53 Score=409.45 Aligned_cols=264 Identities=39% Similarity=0.688 Sum_probs=237.7
Q ss_pred CcceeeccceEEEEEeCCCeeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHH
Q 016578 97 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLR 176 (387)
Q Consensus 97 g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~ 176 (387)
|+.++++++++|++++|+||+|.|++++.+|++|++||.+|++++|++.|+|||.|++++.++++++|||||||+|.+++
T Consensus 12 ~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 91 (275)
T 1iy9_A 12 NFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIR 91 (275)
T ss_dssp TEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEEESCTTCHHHH
T ss_pred CcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhCCCCCEEEEECCchHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHH
Q 016578 177 EISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKP 256 (387)
Q Consensus 177 el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~e 256 (387)
+++++.+..+|++||+|+.+++.|+++++.++.+++++|++++++|+++++... +++||+|++|++++..++..|++.+
T Consensus 92 ~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~~~~ 170 (275)
T 1iy9_A 92 EILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-ENQYDVIMVDSTEPVGPAVNLFTKG 170 (275)
T ss_dssp HHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-CSCEEEEEESCSSCCSCCCCCSTTH
T ss_pred HHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCeeEEEECCCCCCCcchhhhHHH
Confidence 999997778999999999999999999987654567889999999999998764 5689999999999888888899999
Q ss_pred HHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCch
Q 016578 257 FFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPI 336 (387)
Q Consensus 257 f~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~ 336 (387)
||+.++++|+|||+++++..++|.+.+.++.+.++++++|+ .+.++++.+|+||+|.|+|++|||+..+.++
T Consensus 171 ~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vp~~~~g~w~~~~ask~~~~~~~------- 242 (275)
T 1iy9_A 171 FYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFP-ITKLYTANIPTYPSGLWTFTIGSKKYDPLAV------- 242 (275)
T ss_dssp HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCS-EEEEEEECCTTSGGGCEEEEEEESSCCTTCC-------
T ss_pred HHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCC-CeEEEEEecCcccCcceEEEEeeCCCCcccc-------
Confidence 99999999999999999999999888889999999999999 7888889999999999999999987433321
Q ss_pred hhhhccccCCCCCeeeCHHHHHHHhcCCHHHHHHhh
Q 016578 337 EKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVS 372 (387)
Q Consensus 337 ~~~~~~~~~~~~l~yy~~~~h~aaF~lP~~~~~~l~ 372 (387)
+.. .....++||||+++|+|+|+||+|+++.|+
T Consensus 243 ~~~---~~~~~~~~~~~~~~~~~~f~lp~~~~~~~~ 275 (275)
T 1iy9_A 243 EDS---RFFDIETKYYTKDIHKAAFVLPKFVSDLIK 275 (275)
T ss_dssp CGG---GCCCCCCSSCCHHHHHHTTCCCHHHHTTC-
T ss_pred chh---hccccCCeEeCHHHHHHHcCCCHHHHHhhC
Confidence 110 112347899999999999999999998763
No 8
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=100.00 E-value=1.4e-52 Score=407.25 Aligned_cols=290 Identities=35% Similarity=0.656 Sum_probs=247.0
Q ss_pred CccccccccccccccccccccCccccCcccccCCCCCchhhcccccccccccccCCCcceeeccceEEEEEeCCCeeEEE
Q 016578 41 PELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLV 120 (387)
Q Consensus 41 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~g~~~~~~v~~vl~~~~S~~q~I~v 120 (387)
||.+..+|+ +..+||+|. .. || |.++++.++++|++++|+||+|.|
T Consensus 5 ~~~~~~~~~-~~~~w~~e~--------------~~-~~------------------~~~~~~~~~~~l~~~~s~~q~i~v 50 (296)
T 1inl_A 5 KELERELQP-RQHLWYFEY--------------YT-GN------------------NVGLFMKMNRVIYSGQSDIQRIDI 50 (296)
T ss_dssp HHHCCCCCC-CSSEEEEEE--------------CT-TS------------------SEEEEEECSEEEEEEECSSCEEEE
T ss_pred hhhHhhcCC-CCCceEEEe--------------cC-CC------------------CceEEeecccEEEEEECCCccEEE
Confidence 566777888 889999997 44 99 999999999999999999999999
Q ss_pred EEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHH
Q 016578 121 FESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVS 200 (387)
Q Consensus 121 ~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~a 200 (387)
++++.+|+.|++||.+|++++|++.|+||++|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|
T Consensus 51 ~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a 130 (296)
T 1inl_A 51 FENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAA 130 (296)
T ss_dssp EEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHH
T ss_pred EEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcCCCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999998888889999999999999999999997678999999999999999
Q ss_pred HhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCC-CCCccccchHHHHHHHHHhccCCCeEEecccccc
Q 016578 201 KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDP-VGPAQELVEKPFFDTIAKALRPGGVLCNMAESMW 279 (387)
Q Consensus 201 r~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp-~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~ 279 (387)
+++++.++.++++++++++.+|+++++... +++||+|++|++++ .++...+++.+|++.++++|+|||+++++..++|
T Consensus 131 ~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 209 (296)
T 1inl_A 131 RKYLKQTSCGFDDPRAEIVIANGAEYVRKF-KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPF 209 (296)
T ss_dssp HHHCHHHHGGGGCTTEEEEESCHHHHGGGC-SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHHhHhhccccCCCceEEEECcHHHHHhhC-CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 999976433445789999999999998654 56899999999988 7777788999999999999999999999999998
Q ss_pred hhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCchhhhhccccCCCCCeeeCHHHHHH
Q 016578 280 LHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSA 359 (387)
Q Consensus 280 ~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~l~yy~~~~h~a 359 (387)
.+...+..+.++++++|+ .+.++.+.+|+||+|.|||++|||+.. |.+.+.. ++......++||||+++|+|
T Consensus 210 ~~~~~~~~~~~~l~~~F~-~v~~~~~~vp~~p~g~~~f~~as~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 281 (296)
T 1inl_A 210 YDIGWFKLAYRRISKVFP-ITRVYLGFMTTYPSGMWSYTFASKGID------PIKDFDP-EKVRKFNKELKYYNEEVHVA 281 (296)
T ss_dssp TTHHHHHHHHHHHHHHCS-EEEEEEEECTTSTTSEEEEEEEESSCC------TTTTCCH-HHHHTCSSCCSSCCHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCC-ceEEEEeecCccCCCceEEEEecCCCC------hhhhhhh-hhHhhccCCceecCHHHHHH
Confidence 888889999999999999 788888999999999999999998732 3221210 01111234789999999999
Q ss_pred HhcCCHHHHHHhhc
Q 016578 360 AFALPAFLKREVSV 373 (387)
Q Consensus 360 aF~lP~~~~~~l~~ 373 (387)
+|+||+|+++.|+.
T Consensus 282 ~f~~p~~~~~~~~~ 295 (296)
T 1inl_A 282 SFALPNFVKKELGL 295 (296)
T ss_dssp TTCCCHHHHHHTTC
T ss_pred HcCCcHHHHHHHhh
Confidence 99999999999864
No 9
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=100.00 E-value=1.3e-51 Score=404.98 Aligned_cols=281 Identities=53% Similarity=0.922 Sum_probs=247.7
Q ss_pred cccccccccccCccccCcccccCCCCCchhhcccccccccccccCCCcceeeccceEEEEEeCCCeeEEEEEecCceeEE
Q 016578 51 VVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVL 130 (387)
Q Consensus 51 ~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L 130 (387)
...+||+|. ..+|| |.++++.++++|++++|+||+|.|++++.+|+.|
T Consensus 39 ~~~~w~~e~--------------~~~~~------------------~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l 86 (321)
T 2pt6_A 39 FSKKWFSEF--------------SIMWP------------------GQAFSLKIKKILYETKSKYQNVLVFESTTYGKVL 86 (321)
T ss_dssp --CCEEEEC--------------CTTST------------------TCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEE
T ss_pred ccceEEEEe--------------ccCCC------------------CceEEEecccEEEEEECCCceEEEEEcCCCcEEE
Confidence 457899998 66899 9999999999999999999999999999999999
Q ss_pred EEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCC
Q 016578 131 VLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG 210 (387)
Q Consensus 131 ~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~ 210 (387)
++||.+|.+++|++.|+||++|++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++....+
T Consensus 87 ~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~ 166 (321)
T 2pt6_A 87 VLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG 166 (321)
T ss_dssp EETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG
T ss_pred EECCEeeeCcccchHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999988888899999999999999999999977789999999999999999999864334
Q ss_pred CCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHH
Q 016578 211 FEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMIS 290 (387)
Q Consensus 211 ~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~ 290 (387)
+++++++++.+|+.+++... +++||+|++|.++|.++...+++.+|++.++++|+|||+++++..++|.+.+.++.+.+
T Consensus 167 ~~~~~v~~~~~D~~~~l~~~-~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~ 245 (321)
T 2pt6_A 167 YEDKRVNVFIEDASKFLENV-TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIG 245 (321)
T ss_dssp GGSTTEEEEESCHHHHHHHC-CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHH
T ss_pred cCCCcEEEEEccHHHHHhhc-CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHH
Confidence 55789999999999998654 56899999999998888778888999999999999999999998888888888999999
Q ss_pred HHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCchhhhhccccCC-CCCeeeCHHHHHHHhcCCHHHHH
Q 016578 291 ICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHK-RELRFYNSEIHSAAFALPAFLKR 369 (387)
Q Consensus 291 ~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~~~~~~~~~~~-~~l~yy~~~~h~aaF~lP~~~~~ 369 (387)
+++++|+ .+.++++.+|+||+|+|||++|||+..|.++.. +.+ .... .++||||+++|+|+|+||+|+++
T Consensus 246 ~l~~~F~-~v~~~~~~vp~~~~g~w~f~~as~~~~p~~~~~--~~~------~~~~~~~~~~y~~~~h~~~f~lp~~~~~ 316 (321)
T 2pt6_A 246 YAKKLFK-KVEYANISIPTYPCGCIGILCCSKTDTGLTKPN--KKL------ESKEFADLKYYNYENHSAAFKLPAFLLK 316 (321)
T ss_dssp HHHTTCS-EEEEEEEECTTSGGGEEEEEEEESSTTCSSSCS--SCC------CSGGGTTCSSCCHHHHHHTTCCCHHHHH
T ss_pred HHHHHCC-CeEEEEEEeccccCceEEEEEeeCCCCccchhH--HHH------HhccCCCCeEECHHHHHHHhCCcHHHHH
Confidence 9999999 788889999999999999999998744433210 111 1111 36899999999999999999999
Q ss_pred Hhhc
Q 016578 370 EVSV 373 (387)
Q Consensus 370 ~l~~ 373 (387)
.|+.
T Consensus 317 ~~~~ 320 (321)
T 2pt6_A 317 EIEN 320 (321)
T ss_dssp HTSC
T ss_pred HHhh
Confidence 9863
No 10
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=100.00 E-value=1.7e-51 Score=400.73 Aligned_cols=287 Identities=44% Similarity=0.894 Sum_probs=244.5
Q ss_pred ccccccccccccccCccccCcccccCCCCCchhhcccccccccccccCCCcceeeccceEEEEEeCCCeeEEEEEec---
Q 016578 48 HSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESL--- 124 (387)
Q Consensus 48 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~g~~~~~~v~~vl~~~~S~~q~I~v~es~--- 124 (387)
...+.++||+|. ..+|| ++.++++++++|++.+|+||+|.|+++.
T Consensus 12 ~~~~~~~w~~e~--------------~~~~~------------------~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g 59 (304)
T 3bwc_A 12 SELISGGWFREE--------------NDQWP------------------GQAMSLRVEKVLYDAPTKFQHLTIFESDPKG 59 (304)
T ss_dssp CCCCTTSEEEEC--------------CSSSC------------------SEEEEEEEEEEEEEEECSSSEEEEEEECTTS
T ss_pred CccccCceEEEe--------------ccCCC------------------CceEEEecccEEEEeECCCCCEEEEEecCCC
Confidence 345678899998 67899 9999999999999999999999999999
Q ss_pred CceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhc
Q 016578 125 AYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYF 204 (387)
Q Consensus 125 ~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~ 204 (387)
.+|++|++||.+|+++.+++.|++|+++++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|++++
T Consensus 60 ~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~ 139 (304)
T 3bwc_A 60 PWGTVMALDGCIQVTDYDEFVYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHF 139 (304)
T ss_dssp SCCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHC
T ss_pred ccceEEEECCeeeeecccchHHHHHHhhhhhhcCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHh
Confidence 89999999999999999999999999999998888999999999999999999999977789999999999999999999
Q ss_pred ccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhH
Q 016578 205 PELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHL 284 (387)
Q Consensus 205 ~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~ 284 (387)
+.++.++.+++++++.+|+.+++....+++||+||+|.+++.++...+++.+|++.++++|+|||+++++..++|.....
T Consensus 140 ~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~ 219 (304)
T 3bwc_A 140 PQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLEL 219 (304)
T ss_dssp HHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHH
T ss_pred HHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHH
Confidence 75443456789999999999998652356899999999998888888999999999999999999999999888888888
Q ss_pred HHHHHHHHHHH-cCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCchhhhhccccCCCCCeeeCHHHHHHHhcC
Q 016578 285 IEDMISICRET-FKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFAL 363 (387)
Q Consensus 285 ~~~~~~~l~~~-F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~l~yy~~~~h~aaF~l 363 (387)
.+.+.+.++++ |+ .+.++...+|+||+|.|+|++|||+ +..+...|.+.+.. ++ ...++||||+++|+|+|+|
T Consensus 220 ~~~~~~~l~~~GF~-~v~~~~~~vP~yp~g~w~f~~as~~-~~~~~~~~~~~~~~-~~---~~~~~~~y~~~~~~~~f~~ 293 (304)
T 3bwc_A 220 IEKMSRFIRETGFA-SVQYALMHVPTYPCGSIGTLVCSKK-AGVDVTKPLRPVED-MP---FAKDLKYYDSEMHKASFAL 293 (304)
T ss_dssp HHHHHHHHHHHTCS-EEEEEECCCTTSTTSCCEEEEEESS-SSCCTTSCSSCGGG-SG---GGGGCSSCCHHHHHHHTCC
T ss_pred HHHHHHHHHhCCCC-cEEEEEeecccccCcceEEEEEeCC-ccccccChhhhhhh-hh---hccCCeEECHHHHHHHcCC
Confidence 89999999999 98 6788888999999999999999987 32233456442311 11 1126999999999999999
Q ss_pred CHHHHHHhh
Q 016578 364 PAFLKREVS 372 (387)
Q Consensus 364 P~~~~~~l~ 372 (387)
|+|++++|+
T Consensus 294 p~~~~~~~~ 302 (304)
T 3bwc_A 294 PRFARHINN 302 (304)
T ss_dssp CGGGGGGTC
T ss_pred CHHHHHHhc
Confidence 999999886
No 11
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=100.00 E-value=1.3e-49 Score=389.39 Aligned_cols=276 Identities=33% Similarity=0.534 Sum_probs=238.9
Q ss_pred CcceeeccceEEEEEeCCCeeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHH
Q 016578 97 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLR 176 (387)
Q Consensus 97 g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~ 176 (387)
+++++++++++|++++|+||+|.|+++..+|++|++||.+|+++.+++.|+||++|++++.|+++++|||||||+|.+++
T Consensus 14 ~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 93 (314)
T 1uir_A 14 YETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLR 93 (314)
T ss_dssp SEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEEECTTSHHHH
T ss_pred CcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHHHHHHHHhcCCCCCeEEEEcCCcCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHhcCCCceEEEEeCCHHHHHHHHhhcccccCC-CCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCC---CCcccc
Q 016578 177 EISRHDSVELIDICEIDKMVIDVSKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPV---GPAQEL 252 (387)
Q Consensus 177 el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~-~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~---~~~~~L 252 (387)
+++++.+..+|++||+|+.+++.|+++++.++.+ +++++++++++|+.+++... +++||+||+|.+++. ++...+
T Consensus 94 ~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~~~~l 172 (314)
T 1uir_A 94 EVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT-EERYDVVIIDLTDPVGEDNPARLL 172 (314)
T ss_dssp HHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-CCCEEEEEEECCCCBSTTCGGGGG
T ss_pred HHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-CCCccEEEECCCCcccccCcchhc
Confidence 9999977789999999999999999999764333 45789999999999998664 568999999999987 777788
Q ss_pred chHHHHHHHHHhccCCCeEEecccccc-hhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCC
Q 016578 253 VEKPFFDTIAKALRPGGVLCNMAESMW-LHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVN 331 (387)
Q Consensus 253 ~~~ef~~~l~~~LkpgGvlv~q~~s~~-~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~ 331 (387)
++.+|++.++++|+|||+++++..+++ .+.+.++.+.++++++|+ .+.++.+.+|+| +|.|+|++|||+..+.++.
T Consensus 173 ~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vP~~-~g~~~~~~as~~~~p~~~~- 249 (314)
T 1uir_A 173 YTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFR-YVRSYKNHIPGF-FLNFGFLLASDAFDPAAFS- 249 (314)
T ss_dssp SSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCS-EEEEEEEEEGGG-TEEEEEEEEESSSCTTCCC-
T ss_pred cHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCC-ceEEEEEecCCC-CCeEEEEEEECCCCcccCC-
Confidence 899999999999999999999988888 677888999999999999 688888999999 7899999999875444432
Q ss_pred CCCchhhhhccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhcCCCCCC
Q 016578 332 PINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGDSPT 379 (387)
Q Consensus 332 p~~~~~~~~~~~~~~~~l~yy~~~~h~aaF~lP~~~~~~l~~~~~~~~ 379 (387)
| ..++. +......++||||+++|+|+|+||+|+++.|+......|
T Consensus 250 ~-~~~~~--~~~~~~~~~~~~~~~~~~~~f~lp~~~~~~~~~~~~~~t 294 (314)
T 1uir_A 250 E-GVIEA--RIRERNLALRHLTAPYLEAMFVLPKDLLEALEKETMVST 294 (314)
T ss_dssp T-THHHH--HHHHTTCCCSSCCHHHHHHTTCCCHHHHHHHHHCCCCCC
T ss_pred H-HHHHH--HhhccccCccccCHHHHHHHcCCCHHHHHHhhCCCCccc
Confidence 2 12211 111122378999999999999999999999987765444
No 12
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=100.00 E-value=1.9e-49 Score=382.20 Aligned_cols=262 Identities=33% Similarity=0.609 Sum_probs=227.7
Q ss_pred CcceeeccceEEEEEeCCCeeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHH
Q 016578 97 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLR 176 (387)
Q Consensus 97 g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~ 176 (387)
|++++++++++|++++|+||+|.|++++.+|+.|++||.+|++++|++.|+||+.|++++.++++++|||||||+|.+++
T Consensus 12 ~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 91 (281)
T 1mjf_A 12 GYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRVLVIGGGDGGTVR 91 (281)
T ss_dssp GEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHSSCCCEEEEEECTTSHHHH
T ss_pred CceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhCCCCCeEEEEcCCcCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred HHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCC-------CCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCc
Q 016578 177 EISRHDSVELIDICEIDKMVIDVSKKYFPELAVGF-------EDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPA 249 (387)
Q Consensus 177 el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~-------~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~ 249 (387)
+++++ +..+|++||+|+.+++.|++++ ..+.++ ++++++++.+|+.+++.. +++||+|++|.+++.++.
T Consensus 92 ~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~--~~~fD~Ii~d~~~~~~~~ 167 (281)
T 1mjf_A 92 EVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN--NRGFDVIIADSTDPVGPA 167 (281)
T ss_dssp HHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH--CCCEEEEEEECCCCC---
T ss_pred HHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc--cCCeeEEEECCCCCCCcc
Confidence 99999 7789999999999999999998 543344 578999999999999876 468999999999988877
Q ss_pred cccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCC
Q 016578 250 QELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDF 329 (387)
Q Consensus 250 ~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~ 329 (387)
..+++.+|++.++++|+|||+++++.+++|...+.++.+.++++++|+ .+.++...+|+| +|.|+|++|||+.
T Consensus 168 ~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~-~v~~~~~~vP~~-~g~~~~~~as~~~----- 240 (281)
T 1mjf_A 168 KVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFD-RVYYYSFPVIGY-ASPWAFLVGVKGD----- 240 (281)
T ss_dssp --TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCS-EEEEEEECCTTS-SSSEEEEEEEESS-----
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCC-ceEEEEEecCCC-CceEEEEEeeCCC-----
Confidence 788899999999999999999999988888888889999999999999 688888899999 8899999999861
Q ss_pred CCCCCchhhhhccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhc
Q 016578 330 VNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV 373 (387)
Q Consensus 330 ~~p~~~~~~~~~~~~~~~~l~yy~~~~h~aaF~lP~~~~~~l~~ 373 (387)
.+|.. ++. ++. ...++||||+++|+|+|+||+|+++.|+.
T Consensus 241 ~~~~~-~~~-~~~--~~~~~~~~~~~~~~~~f~~p~~~~~~~~~ 280 (281)
T 1mjf_A 241 IDFTK-IDR-ERA--KKLQLEYYDPLMHETLFQMPKYIRETLQR 280 (281)
T ss_dssp CCTTC-CCH-HHH--HTSCCSSCCGGGGGGGGCCCHHHHHHHC-
T ss_pred CCccc-cch-hhh--hccCCcEECHHHHHHHhcCcHHHHHHHhh
Confidence 12321 111 000 11478999999999999999999999863
No 13
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=100.00 E-value=3.9e-49 Score=377.08 Aligned_cols=249 Identities=21% Similarity=0.275 Sum_probs=219.0
Q ss_pred CcceeeccceEEEEEeCCCeeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHH
Q 016578 97 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLR 176 (387)
Q Consensus 97 g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~ 176 (387)
|++++++++++|++++|+||+|.|++++.+|++|++||. |+++.|++.|+||++|++++.++++++||+||||+|.+++
T Consensus 10 ~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL~iG~G~G~~~~ 88 (262)
T 2cmg_A 10 YLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVLIVDGFDLELAH 88 (262)
T ss_dssp TEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEEEESSCCHHHHH
T ss_pred CceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEEEEeCCcCHHHH
Confidence 899999999999999999999999999999999999999 9999999999999999999889999999999999999999
Q ss_pred HHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHH
Q 016578 177 EISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKP 256 (387)
Q Consensus 177 el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~e 256 (387)
+++++ + .+|++||+|+.+++.|+++++....++++++++++.+|+++++ ++||+||+|+++|. .
T Consensus 89 ~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~fD~Ii~d~~dp~---------~ 152 (262)
T 2cmg_A 89 QLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-----KKYDLIFCLQEPDI---------H 152 (262)
T ss_dssp HHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----CCEEEEEESSCCCH---------H
T ss_pred HHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----hhCCEEEECCCChH---------H
Confidence 99999 6 8999999999999999999976533356789999999999886 57999999987643 2
Q ss_pred HHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCC-CCCCCCCc
Q 016578 257 FFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHV-DFVNPINP 335 (387)
Q Consensus 257 f~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~-~~~~p~~~ 335 (387)
||+.++++|+|||+++++.++++.+...+..+.++++++|+ .+.++...+|+ +|.|+|++|||+..|. ++.
T Consensus 153 ~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~~~~~~~~vP~--~g~~~~~~as~~~~p~~~~~----- 224 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFS-VAMPFVAPLRI--LSNKGYIYASFKTHPLKDLM----- 224 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCS-EEEEECCTTCT--TCCEEEEEEESSCCTTTTCC-----
T ss_pred HHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCC-ceEEEEEccCC--CcccEEEEeeCCCCchhhcC-----
Confidence 89999999999999999988888877788999999999999 67777788998 7899999999874433 221
Q ss_pred hhhhhccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhcC
Q 016578 336 IEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVL 374 (387)
Q Consensus 336 ~~~~~~~~~~~~~l~yy~~~~h~aaF~lP~~~~~~l~~~ 374 (387)
.++. ... .++||||+++|+|+|+||+|+++.|+..
T Consensus 225 ~~~~---~~~-~~~~~y~~~~h~~~f~lp~~~~~~l~~~ 259 (262)
T 2cmg_A 225 TPKI---EAL-TSVRYYNEDIHRAAFALPKNLQEVFKDN 259 (262)
T ss_dssp HHHH---TTC-CSCSSCCHHHHHHTTCCCHHHHHHGGGT
T ss_pred HhHh---hcc-CCCcEECHHHHHHHcCCCHHHHHHHHHH
Confidence 0111 111 4789999999999999999999999854
No 14
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=100.00 E-value=2.8e-47 Score=378.95 Aligned_cols=226 Identities=24% Similarity=0.394 Sum_probs=196.0
Q ss_pred cCCCcceeeccceEEEEEeCCCeeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccH
Q 016578 94 SFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGG 173 (387)
Q Consensus 94 ~~~g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~ 173 (387)
..+|..++++++++||+++|+||+|.|++++.+|++|+|||.+|++++| +.|||||+|++++.+ +|++||+||+|+|+
T Consensus 141 ~sdg~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~l~~~-~pkrVLIIGgGdG~ 218 (381)
T 3c6k_A 141 TADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDY-TGKDVLILGGGDGG 218 (381)
T ss_dssp CTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTCCCC-TTCEEEEEECTTCH
T ss_pred CCCCcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHHHHhhcC-CCCeEEEECCCcHH
Confidence 5679999999999999999999999999999999999999999999999 579999999999766 48999999999999
Q ss_pred HHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCC-CC---CCCEEEEEcchhhHHhhC--CCCCeeEEEEcCCCC--
Q 016578 174 VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG-FE---DPRVRLHIGDAVEFLRQV--PRGKYDAIIVDSSDP-- 245 (387)
Q Consensus 174 ~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~-~~---d~rv~v~~gD~~~~l~~~--~~~~fDvII~D~~dp-- 245 (387)
+++++++|++ ++|++||||++|+++|+++|+..+.+ ++ ++|++++++|+++|+++. ..++||+||+|++|+
T Consensus 219 ~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~ 297 (381)
T 3c6k_A 219 ILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPI 297 (381)
T ss_dssp HHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCC
T ss_pred HHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcc
Confidence 9999999975 89999999999999999999987543 44 456999999999999753 246899999998763
Q ss_pred ----CCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcce--EEEEeeccCCCcEEEEE
Q 016578 246 ----VGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHY--AWASVPTYPSGIIGFLI 319 (387)
Q Consensus 246 ----~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~--~~~~iPtyp~g~~gf~~ 319 (387)
.+++..||+++||+.++++|+|||++++|++++|.. +.+..+.++++++|+ .+.+ +++.|||||+ .|||++
T Consensus 298 s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~-~~~~~i~~tl~~vF~-~v~~~~~~~~VPSy~~-~W~F~~ 374 (381)
T 3c6k_A 298 STSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT-EALSLYEEQLGRLYC-PVEFSKEIVCVPSYLE-LWVFYT 374 (381)
T ss_dssp CCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH-HHHHHHHHHHTTSSS-CEEEEEEEECCGGGSS-CEEEEE
T ss_pred cCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcch-hHHHHHHHHHHHhCC-cceEeeEEEEecCCCC-ceeeeE
Confidence 344678999999999999999999999999999874 567889999999998 5554 4578999994 799999
Q ss_pred EecCCC
Q 016578 320 CSTEGP 325 (387)
Q Consensus 320 ask~~~ 325 (387)
|||+.+
T Consensus 375 aSK~~~ 380 (381)
T 3c6k_A 375 VWKKAK 380 (381)
T ss_dssp EEECCC
T ss_pred EECCCC
Confidence 999743
No 15
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=100.00 E-value=4e-43 Score=347.82 Aligned_cols=223 Identities=26% Similarity=0.434 Sum_probs=192.7
Q ss_pred CCCcceeeccceEEEEEeCCCeeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHH
Q 016578 95 FAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGV 174 (387)
Q Consensus 95 ~~g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~ 174 (387)
.+|+.++++++++||+++|+||+|.|+++..+|++|++||.+|++++| +.|||||.|+++ .|++|++||+||||+|++
T Consensus 125 ~~~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l~~~~~-~~p~pkrVL~IGgG~G~~ 202 (364)
T 2qfm_A 125 ADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGK-EDYTGKDVLILGGGDGGI 202 (364)
T ss_dssp TTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTC-CCCTTCEEEEEECTTCHH
T ss_pred cCCcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHHhhhhh-hCCCCCEEEEEECChhHH
Confidence 357899999999999999999999999999999999999999999999 999999999988 689999999999999999
Q ss_pred HHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccC-CCCCC---CEEEEEcchhhHHhhC--CCCCeeEEEEcCCC-CCC
Q 016578 175 LREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDP---RVRLHIGDAVEFLRQV--PRGKYDAIIVDSSD-PVG 247 (387)
Q Consensus 175 ~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~-~~~d~---rv~v~~gD~~~~l~~~--~~~~fDvII~D~~d-p~~ 247 (387)
+++++++++ .+|++||||+.++++||++|+..+. .+++| |++++++|+++|+++. .+++||+||+|+++ |.+
T Consensus 203 arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~ 281 (364)
T 2qfm_A 203 LCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPIS 281 (364)
T ss_dssp HHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCC
T ss_pred HHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccC
Confidence 999999975 8999999999999999999987643 35555 8999999999999752 24689999999998 765
Q ss_pred C-ccccchHHHHHHH----HHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcce--EEEEeeccCCCcEEEEEE
Q 016578 248 P-AQELVEKPFFDTI----AKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHY--AWASVPTYPSGIIGFLIC 320 (387)
Q Consensus 248 ~-~~~L~~~ef~~~l----~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~--~~~~iPtyp~g~~gf~~a 320 (387)
+ +..|++.+||+.+ +++|+|||++++|+++++. .+....+.+.+++.|+ .|.+ +.+.||+|++ .|+|..|
T Consensus 282 ~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~-~e~~~~~~~~l~~~F~-~v~~~~~~~~vPsy~~-~w~f~~~ 358 (364)
T 2qfm_A 282 TSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEALSLYEEQLGRLYC-PVEFSKEIVCVPSYLE-LWVFYTV 358 (364)
T ss_dssp CC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHHHHHHHHHHTTSSS-CEEEEEEEECCGGGSS-CEEEEEE
T ss_pred cCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch-HHHHHHHHHHHHHhCC-ceEEeeEeeecCCchh-heEeEEe
Confidence 3 3358999999999 8999999999999988776 3334444445888999 6777 7899999997 9999999
Q ss_pred ecC
Q 016578 321 STE 323 (387)
Q Consensus 321 sk~ 323 (387)
+|+
T Consensus 359 ~k~ 361 (364)
T 2qfm_A 359 WKK 361 (364)
T ss_dssp EEC
T ss_pred ecc
Confidence 987
No 16
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=3.3e-32 Score=266.15 Aligned_cols=235 Identities=16% Similarity=0.154 Sum_probs=186.7
Q ss_pred CCCeeEEEEEecC--ceeEEEEcCeEeecc------cchhHHHHHHHhcccc---CCCCCC--EEEEEcCcccHHHHHHH
Q 016578 113 SEYQEVLVFESLA--YGKVLVLDGIVQLTE------KDECAYQEMIAHLPLC---SIPSPK--TVLVVGGGDGGVLREIS 179 (387)
Q Consensus 113 S~~q~I~v~es~~--~G~~L~lDG~~q~~e------~de~~Y~eml~~l~l~---~~~~p~--~VL~IG~G~G~~~~el~ 179 (387)
..|...+|..... +|++|+|||.+|+++ .+++.|||||+|++++ .|++++ +||+||||+|.++++++
T Consensus 29 ~~~~~~~~~~d~~~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la 108 (317)
T 3gjy_A 29 GEYSVIELEADSYTTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFA 108 (317)
T ss_dssp CSSSEEEEEECSSSTTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHH
T ss_pred ceeeeEEEEecCCCCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHH
Confidence 3355577877654 899999999999985 5899999999999987 678876 99999999999999999
Q ss_pred hcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHH
Q 016578 180 RHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFD 259 (387)
Q Consensus 180 k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~ 259 (387)
++.+..+|++||||+.+++.||++|+.. .++|++++++|+++|++..++++||+||+|.+++...+.+|++.+||+
T Consensus 109 ~~~p~~~v~~VEidp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~ 184 (317)
T 3gjy_A 109 DVYPQSRNTVVELDAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFE 184 (317)
T ss_dssp HHSTTCEEEEEESCHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHH
T ss_pred HHCCCcEEEEEECCHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHH
Confidence 9544559999999999999999999754 468999999999999976545789999999999888788899999999
Q ss_pred HHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEE--EEEecCCCCCCCCCCC---C
Q 016578 260 TIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGF--LICSTEGPHVDFVNPI---N 334 (387)
Q Consensus 260 ~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf--~~ask~~~~~~~~~p~---~ 334 (387)
.++++|+|||+|+++..+. .....++.+.++++++|+ .+..+...+|.+. ..||. ++||+... |. .
T Consensus 185 ~~~r~LkpgGvlv~~~~~~-~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g-~~~gN~Vl~As~~pl------p~~~~~ 255 (317)
T 3gjy_A 185 HCHRGLAPGGLYVANCGDH-SDLRGAKSELAGMMEVFE-HVAVIADPPMLKG-RRYGNIILMGSDTEF------FSSNST 255 (317)
T ss_dssp HHHHHEEEEEEEEEEEEEC-TTCHHHHHHHHHHHHHCS-EEEEEECHHHHTT-SSCEEEEEEEESSCC------CCTTSH
T ss_pred HHHHhcCCCcEEEEEecCC-cchHHHHHHHHHHHHHCC-ceEEEEecCCCCC-CcCceEEEEEECCCC------Cccccc
Confidence 9999999999999987653 334577899999999999 5555444455553 35555 78887622 22 0
Q ss_pred chhhhhcc-ccCCCCCeeeCHHHHHHH
Q 016578 335 PIEKLEGA-DKHKRELRFYNSEIHSAA 360 (387)
Q Consensus 335 ~~~~~~~~-~~~~~~l~yy~~~~h~aa 360 (387)
..+.+.++ .....+.||++++.+++-
T Consensus 256 ~~~~l~r~~~~~~~p~~~~~~~~l~~~ 282 (317)
T 3gjy_A 256 EASAITRELLGGGVPAQYKDESWVRKF 282 (317)
T ss_dssp HHHHHHHHHTSSSSCCEEECHHHHHHH
T ss_pred chHHHHHHHcCCCCCeEEECHHHHHHH
Confidence 11223322 344568999999998763
No 17
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.56 E-value=4e-14 Score=129.41 Aligned_cols=152 Identities=17% Similarity=0.227 Sum_probs=106.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCC---CCC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP---RGK 234 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~---~~~ 234 (387)
.++++|||||||+|..+..+++..+ ..+|++||+++.+++.+++++.... + .++++++.+|+.+++.... .++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN--L-NDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT--C-TTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 4578999999999999999998754 5799999999999999999987542 2 3479999999988765421 257
Q ss_pred eeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccch--------hhhHHHHHHHHHHHHcCCCcceEEEE
Q 016578 235 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL--------HTHLIEDMISICRETFKGSVHYAWAS 306 (387)
Q Consensus 235 fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--------~~~~~~~~~~~l~~~F~~~v~~~~~~ 306 (387)
||+|++|...+ ....+++.+.+.|+|||++++... .|. .......+.+.++.+.. ...+....
T Consensus 134 fD~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~ 204 (223)
T 3duw_A 134 FDFIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDNV-VREGEVIDNTSNDPRVQGIRRFYELIAA-EPRVSATA 204 (223)
T ss_dssp CSEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEESC-SGGGGGGCTTCCCHHHHHHHHHHHHHHH-CTTEEEEE
T ss_pred cCEEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeCC-CcCCcccCccccchHHHHHHHHHHHHhh-CCCeEEEE
Confidence 99999987521 235799999999999999986421 111 11222333333333332 23445566
Q ss_pred eec-cCCCcEEEEEEec
Q 016578 307 VPT-YPSGIIGFLICST 322 (387)
Q Consensus 307 iPt-yp~g~~gf~~ask 322 (387)
+|. ...|.=||.+|.+
T Consensus 205 ~p~~~~~~~dG~~~~~~ 221 (223)
T 3duw_A 205 LQTVGSKGYDGFIMAVV 221 (223)
T ss_dssp EEEEETTEEEEEEEEEE
T ss_pred EeccCCCCCCeeEEEEE
Confidence 676 2334568888865
No 18
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=1.1e-13 Score=129.62 Aligned_cols=153 Identities=18% Similarity=0.198 Sum_probs=106.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCC-CCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~-~~~fD 236 (387)
.++++|||||||+|..+..+++..+ ..+|++||+|+.+++.|++++... ++ .++++++.+|+.+++.... .++||
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--g~-~~~v~~~~~d~~~~l~~~~~~~~fD 138 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA--GV-DQRVTLREGPALQSLESLGECPAFD 138 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHTCCSCCCCS
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHhcCCCCCeE
Confidence 3578999999999999999998754 679999999999999999998754 22 3589999999999876542 24899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccch--------hhhHHHHHHHHHHHHcCCCcceEEEEee
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL--------HTHLIEDMISICRETFKGSVHYAWASVP 308 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--------~~~~~~~~~~~l~~~F~~~v~~~~~~iP 308 (387)
+|++|...+ ....+++.+.+.|+|||++++... .|. .......+.+..+.+.. .-.+....+|
T Consensus 139 ~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~~~~-~~~g~v~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~l~ 209 (248)
T 3tfw_A 139 LIFIDADKP-------NNPHYLRWALRYSRPGTLIIGDNV-VRDGEVVNPQSADERVQGVRQFIEMMGA-EPRLTATALQ 209 (248)
T ss_dssp EEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEECC-SGGGGGGCTTCCCHHHHHHHHHHHHHHH-CTTEEEEEEE
T ss_pred EEEECCchH-------HHHHHHHHHHHhcCCCeEEEEeCC-CcCCcccCccccchHHHHHHHHHHHHhh-CCCEEEEEee
Confidence 999987421 134689999999999999986421 121 11122223333333222 2234444454
Q ss_pred ccC-CCcEEEEEEecC
Q 016578 309 TYP-SGIIGFLICSTE 323 (387)
Q Consensus 309 typ-~g~~gf~~ask~ 323 (387)
... .+.=||.++.+.
T Consensus 210 ~~g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 210 TVGTKGWDGFTLAWVN 225 (248)
T ss_dssp ECSTTCSEEEEEEEEC
T ss_pred cCCCCCCCeeEEEEEe
Confidence 442 234689998875
No 19
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.55 E-value=2.1e-14 Score=133.76 Aligned_cols=123 Identities=20% Similarity=0.200 Sum_probs=95.1
Q ss_pred hhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcc
Q 016578 143 ECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGD 222 (387)
Q Consensus 143 e~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD 222 (387)
|..|.+.++... .++..+|||||||+|..+..++++.+ .+|++||+|+.+++.|++++... ..+++++.+|
T Consensus 46 e~~~m~~~a~~~---~~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~-----~~~~~~~~~~ 116 (236)
T 3orh_A 46 ETPYMHALAAAA---SSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGL 116 (236)
T ss_dssp GHHHHHHHHHHH---TTTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESC
T ss_pred HHHHHHHHHHhh---ccCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC-----CCceEEEeeh
Confidence 334544444432 25677999999999999999998854 68999999999999999987653 4689999999
Q ss_pred hhhHHhhCCCCCeeEEEEcCCCCCCCcccc-chHHHHHHHHHhccCCCeEEec
Q 016578 223 AVEFLRQVPRGKYDAIIVDSSDPVGPAQEL-VEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 223 ~~~~l~~~~~~~fDvII~D~~dp~~~~~~L-~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+.+.+...+++.||.|+.|.........++ ....+++.++++|||||+|+..
T Consensus 117 a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 117 WEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred HHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 998877766788999999876433222222 2356889999999999999863
No 20
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.55 E-value=3.6e-14 Score=132.31 Aligned_cols=150 Identities=17% Similarity=0.219 Sum_probs=108.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-----CC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-----PR 232 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-----~~ 232 (387)
.++++|||||||+|..+..+++..+ ..+|+++|+|+.+++.|++++... ++ +++++++.+|+.+++... ..
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--GV-EHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhccCCC
Confidence 4678999999999999999998743 679999999999999999998754 23 358999999999887543 14
Q ss_pred CCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc----cccchh----hh----HHHHHHHHHHHHcCCCc
Q 016578 233 GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA----ESMWLH----TH----LIEDMISICRETFKGSV 300 (387)
Q Consensus 233 ~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~----~s~~~~----~~----~~~~~~~~l~~~F~~~v 300 (387)
++||+|++|.... ...++++.+.+.|+|||++++.. +.++.. .. ..+.+.+..+.++. ..
T Consensus 146 ~~fD~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~-~~ 217 (237)
T 3c3y_A 146 GSYDFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAA-DP 217 (237)
T ss_dssp TCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHH-CT
T ss_pred CCcCEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhc-CC
Confidence 6899999986421 24579999999999999998742 111111 01 23344445555555 34
Q ss_pred ceEEEEeeccCCCcEEEEEEecC
Q 016578 301 HYAWASVPTYPSGIIGFLICSTE 323 (387)
Q Consensus 301 ~~~~~~iPtyp~g~~gf~~ask~ 323 (387)
.+..+.+|.+ -|+.++.|.
T Consensus 218 ~~~~~~lp~~----dG~~~~~~~ 236 (237)
T 3c3y_A 218 RIEIVHLPLG----DGITFCRRL 236 (237)
T ss_dssp TEEEEEECST----TCEEEEEEC
T ss_pred CeEEEEEEeC----CceEEEEEc
Confidence 6667778875 357777653
No 21
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.54 E-value=7.1e-14 Score=124.83 Aligned_cols=110 Identities=16% Similarity=0.156 Sum_probs=88.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||+|||+|.++.++++.+ ..+|+++|+|+.+++.+++++... ++ ++++++.+|+.+++...++++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEAL--GL--SGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHH--TC--SCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHc--CC--CceEEEEccHHHHHhhccCCCccEE
Confidence 456799999999999999888864 568999999999999999998765 22 5899999999998765545789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHH--hccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAK--ALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~--~LkpgGvlv~q~~ 276 (387)
++|.+..... -...++++.+.+ .|+|||+++++..
T Consensus 118 ~~~~p~~~~~---~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNVDS---ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTSCH---HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCcch---hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 9987643221 113468889998 9999999998653
No 22
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.53 E-value=7.4e-14 Score=131.24 Aligned_cols=149 Identities=17% Similarity=0.213 Sum_probs=106.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-----CC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-----PR 232 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-----~~ 232 (387)
.++++|||||||+|..+..+++..+ ..+|++||+|+.+++.|++++... ++ +++++++.+|+.+++... ..
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA--GV-DHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCCeEEEECCHHHHHHHHHhccCCC
Confidence 4678999999999999999998743 579999999999999999998764 22 358999999999887543 13
Q ss_pred CCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc----cccchh----h-----hHHHHHHHHHHHHcCCC
Q 016578 233 GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA----ESMWLH----T-----HLIEDMISICRETFKGS 299 (387)
Q Consensus 233 ~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~----~s~~~~----~-----~~~~~~~~~l~~~F~~~ 299 (387)
++||+|++|.... ....+++.+.+.|+|||++++.. +..+.. . ...+.+.+..+.++. .
T Consensus 155 ~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~~~~~~l~~-~ 226 (247)
T 1sui_A 155 GSYDFIFVDADKD-------NYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAV-D 226 (247)
T ss_dssp TCBSEEEECSCST-------THHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHHHHHHHHHHHT-C
T ss_pred CCEEEEEEcCchH-------HHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhHHHHHHHHHHHHHhh-C
Confidence 6899999986521 13569999999999999998642 111111 0 112234444455555 3
Q ss_pred cceEEEEeeccCCCcEEEEEEec
Q 016578 300 VHYAWASVPTYPSGIIGFLICST 322 (387)
Q Consensus 300 v~~~~~~iPtyp~g~~gf~~ask 322 (387)
..+....+|.+ -||.++.|
T Consensus 227 ~~~~~~~lp~~----dG~~l~~k 245 (247)
T 1sui_A 227 PRIEICMLPVG----DGITICRR 245 (247)
T ss_dssp TTBCCEEECST----TCEEEECB
T ss_pred CCeEEEEEecC----CccEEEEE
Confidence 44555677865 24777765
No 23
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.53 E-value=1.2e-13 Score=128.01 Aligned_cols=104 Identities=21% Similarity=0.338 Sum_probs=87.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHh-hCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR-QVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~-~~~~~~fDv 237 (387)
.++++|||||||+|..+..+++..+..+|++||+|+.+++.|++++.... + .++++++.+|+.+++. .. +++||+
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~~-~~~fD~ 145 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH--F-ENQVRIIEGNALEQFENVN-DKVYDM 145 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT--C-TTTEEEEESCGGGCHHHHT-TSCEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCcEEEEECCHHHHHHhhc-cCCccE
Confidence 36789999999999999999996557899999999999999999987652 2 3589999999998876 44 468999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
|++|..... ..++++.+.+.|+|||++++
T Consensus 146 V~~~~~~~~-------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 146 IFIDAAKAQ-------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp EEEETTSSS-------HHHHHHHHGGGEEEEEEEEE
T ss_pred EEEcCcHHH-------HHHHHHHHHHhcCCCeEEEE
Confidence 999864221 34699999999999999987
No 24
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.53 E-value=1.2e-13 Score=127.71 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=86.6
Q ss_pred EEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEc
Q 016578 163 TVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVD 241 (387)
Q Consensus 163 ~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D 241 (387)
+|||||||+|..+..+++. ++..+|++||+|+.+++.|++++... ++.+++++++.+|+.+++....+++||+|++|
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--GYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT--TCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 9999999999999999986 44679999999999999999998765 33335899999999999876545789999998
Q ss_pred CCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 242 SSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 242 ~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
..... ..++++.+.+.|+|||++++.
T Consensus 137 ~~~~~-------~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 137 VSPMD-------LKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CCTTT-------HHHHHHHHHHHEEEEEEEEET
T ss_pred CcHHH-------HHHHHHHHHHHcCCCcEEEEe
Confidence 64221 346899999999999999974
No 25
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.51 E-value=8.6e-14 Score=126.35 Aligned_cols=147 Identities=16% Similarity=0.215 Sum_probs=104.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
.++++|||||||+|..+..+++..+ ..+|++||+|+.+++.|++++.... + .++++++.+|+.+++... ++ ||+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~-~~-fD~ 129 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG--L-IDRVELQVGDPLGIAAGQ-RD-IDI 129 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS--G-GGGEEEEESCHHHHHTTC-CS-EEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--C-CceEEEEEecHHHHhccC-CC-CCE
Confidence 3578999999999999999998744 5799999999999999999886542 2 358999999999887654 45 999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchh-------hhHHHHHHHHHHHHcCCCcceEEEEeecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLH-------THLIEDMISICRETFKGSVHYAWASVPTY 310 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~-------~~~~~~~~~~l~~~F~~~v~~~~~~iPty 310 (387)
|++|... .....+++.+.+.|+|||++++.. ..|.. ....+.+.+.++.++. ...+....+|.+
T Consensus 130 v~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~p~~ 200 (210)
T 3c3p_A 130 LFMDCDV-------FNGADVLERMNRCLAKNALLIAVN-ALRRGSVAESHEDPETAALREFNHHLSR-RRDFFTTIVPVG 200 (210)
T ss_dssp EEEETTT-------SCHHHHHHHHGGGEEEEEEEEEES-SSSCC------------CCCHHHHHHTT-CTTEEEEEECST
T ss_pred EEEcCCh-------hhhHHHHHHHHHhcCCCeEEEEEC-ccccCcccCcccchHHHHHHHHHHHHhh-CCCeEEEEEecC
Confidence 9998532 124579999999999999998732 11211 1112223334445555 345555666754
Q ss_pred CCCcEEEEEEecC
Q 016578 311 PSGIIGFLICSTE 323 (387)
Q Consensus 311 p~g~~gf~~ask~ 323 (387)
.||.++.|.
T Consensus 201 ----~G~~~~~~~ 209 (210)
T 3c3p_A 201 ----NGVLLGYRL 209 (210)
T ss_dssp ----TCEEEEEEC
T ss_pred ----CceEEEEeC
Confidence 568887764
No 26
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.51 E-value=1.5e-13 Score=126.82 Aligned_cols=114 Identities=21% Similarity=0.261 Sum_probs=94.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCeeEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDAI 238 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~fDvI 238 (387)
...+|||||||+|.++..+++..+..+|++||+++.+++.|+++.... .-.+++++.+|+.+++.. .++++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~----~l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE----GLSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT----TCSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh----CCCcEEEEECCHHHHHHHHcCCCChheE
Confidence 456999999999999999998877789999999999999999987644 124799999999997653 456799999
Q ss_pred EEcCCCCCCCc----cccchHHHHHHHHHhccCCCeEEecccc
Q 016578 239 IVDSSDPVGPA----QELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 239 I~D~~dp~~~~----~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
++..++|+... ..+...++++.+++.|+|||+|++.+.+
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 99888876543 2345568999999999999999876543
No 27
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.50 E-value=2.9e-13 Score=123.39 Aligned_cols=113 Identities=21% Similarity=0.320 Sum_probs=91.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
+..+|||||||+|.++..+++..+..+|++||+++.+++.|++++... ++ ++++++.+|+.++....++++||+|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~--~~--~~v~~~~~d~~~~~~~~~~~~~D~i~ 116 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV--GV--PNIKLLWVDGSDLTDYFEDGEIDRLY 116 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--CC--SSEEEEECCSSCGGGTSCTTCCSEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc--CC--CCEEEEeCCHHHHHhhcCCCCCCEEE
Confidence 467999999999999999998866679999999999999999987654 22 58999999998753223456899999
Q ss_pred EcCCCCCCCc----cccchHHHHHHHHHhccCCCeEEeccc
Q 016578 240 VDSSDPVGPA----QELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 240 ~D~~dp~~~~----~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
++.++|+... ..+...++++.+.++|+|||++++.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 117 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 9988765331 223457899999999999999998654
No 28
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.49 E-value=3.5e-13 Score=123.43 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=92.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
+..+|||||||+|.++..+++..+..+|++||+++.+++.|++++... + -++++++.+|+.++....+++.||.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~--~--~~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS--E--AQNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS--C--CSSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc--C--CCCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 456899999999999999998866789999999999999999987654 1 257999999998853324456899999
Q ss_pred EcCCCCCCCc----cccchHHHHHHHHHhccCCCeEEecccc
Q 016578 240 VDSSDPVGPA----QELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 240 ~D~~dp~~~~----~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
+..++|+... ..+....+++.+.+.|+|||++++.+.+
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9888876432 2345678999999999999999976543
No 29
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.48 E-value=2.5e-12 Score=113.30 Aligned_cols=135 Identities=15% Similarity=0.261 Sum_probs=100.3
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
...++..+. ..+..+|||||||+|..+..+++. ..+|+++|+++.+++.+++++... ++.+.+++++.+|+.+
T Consensus 41 ~~~l~~~~~---~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 41 TKILVENVV---VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLN--NLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHCC---CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHT--TCTTSCEEEEECSTTT
T ss_pred HHHHHHHcc---cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECchhc
Confidence 345555553 346679999999999999999988 469999999999999999988654 2223359999999887
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcC
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 297 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~ 297 (387)
.+. +++||+|+++.+..... -....+++.+.+.|+|||++++...+. .....+.+.+++.|.
T Consensus 114 ~~~---~~~~D~v~~~~~~~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~~~~ 175 (194)
T 1dus_A 114 NVK---DRKYNKIITNPPIRAGK---EVLHRIIEEGKELLKDNGEIWVVIQTK----QGAKSLAKYMKDVFG 175 (194)
T ss_dssp TCT---TSCEEEEEECCCSTTCH---HHHHHHHHHHHHHEEEEEEEEEEEEST----HHHHHHHHHHHHHHS
T ss_pred ccc---cCCceEEEECCCcccch---hHHHHHHHHHHHHcCCCCEEEEEECCC----CChHHHHHHHHHHhc
Confidence 543 46899999876533211 123568999999999999998765332 233456677777787
No 30
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.48 E-value=1.4e-13 Score=129.00 Aligned_cols=106 Identities=19% Similarity=0.309 Sum_probs=86.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC----CCC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV----PRG 233 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~----~~~ 233 (387)
.++++|||||||+|..+..+++.. +..+|++||+++.+++.|++++.... + .++++++.+|+.+++... ..+
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~-~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK--Q-EHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT--C-TTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCcEEEEEcCHHHHHHHHhhccCCC
Confidence 467899999999999999999864 35799999999999999999987652 2 358999999999887643 136
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+||+|++|... -....+++.+.+.|+|||++++.
T Consensus 136 ~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 136 QFDFIFIDADK-------TNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp CEEEEEEESCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEeEEEEcCCh-------HHhHHHHHHHHHhcCCCeEEEEE
Confidence 89999998741 11346899999999999999873
No 31
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.47 E-value=8.4e-13 Score=120.57 Aligned_cols=106 Identities=19% Similarity=0.328 Sum_probs=86.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCC----C
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR----G 233 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~----~ 233 (387)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++.... + .++++++.+|+.+++..... +
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG--L-SDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT--C-TTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC--C-CCceEEEeCCHHHHHHHhhhccCCC
Confidence 3567999999999999999998743 6799999999999999999986542 2 35799999999888754321 6
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+||+|++|... -....+++.+.+.|+|||++++.
T Consensus 140 ~fD~v~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 140 QYDLIYIDADK-------ANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp CEEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCH-------HHHHHHHHHHHHhcCCCcEEEEe
Confidence 89999988741 11346899999999999999863
No 32
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.45 E-value=9e-13 Score=120.72 Aligned_cols=148 Identities=18% Similarity=0.290 Sum_probs=103.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCC----C
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR----G 233 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~----~ 233 (387)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+.+..... +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA--EA-EHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CC-CCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 4578999999999999999998743 579999999999999999998654 22 35899999999887654311 5
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccch--------hhhHHHHHHHHHHHHcCCCcceEEE
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL--------HTHLIEDMISICRETFKGSVHYAWA 305 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--------~~~~~~~~~~~l~~~F~~~v~~~~~ 305 (387)
+||+|++|.... ....+++.+.+.|+|||++++.. ..|. .......+.+..+.+.. .-.+..+
T Consensus 145 ~~D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~ 215 (229)
T 2avd_A 145 TFDVAVVDADKE-------NCSAYYERCLQLLRPGGILAVLR-VLWRGKVLQPPKGDVAAECVRNLNERIRR-DVRVYIS 215 (229)
T ss_dssp CEEEEEECSCST-------THHHHHHHHHHHEEEEEEEEEEC-CSGGGGGGSCCTTCHHHHHHHHHHHHHHH-CTTEEEE
T ss_pred CccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEEC-CCcCCcccCcccCChHHHHHHHHHHHHhh-CCCEEEE
Confidence 899999986521 13468999999999999998732 1111 11223333344444433 2245555
Q ss_pred EeeccCCCcEEEEEEec
Q 016578 306 SVPTYPSGIIGFLICST 322 (387)
Q Consensus 306 ~iPtyp~g~~gf~~ask 322 (387)
.+|.. -|+.++.|
T Consensus 216 ~lp~~----dGl~~~~k 228 (229)
T 2avd_A 216 LLPLG----DGLTLAFK 228 (229)
T ss_dssp EECST----TCEEEEEE
T ss_pred EEecC----CceEEEEE
Confidence 66654 25666654
No 33
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.44 E-value=4.9e-13 Score=126.92 Aligned_cols=108 Identities=15% Similarity=0.182 Sum_probs=83.9
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCe
Q 016578 158 IPSPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 235 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~f 235 (387)
.++..+|||||||+|..+..++++. +..+|++||+++.+++.||+++..... ..+++++.+|+.++ +.+.|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~---~~~v~~~~~D~~~~----~~~~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA---PTPVDVIEGDIRDI----AIENA 140 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC---SSCEEEEESCTTTC----CCCSE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc---CceEEEeecccccc----ccccc
Confidence 3566799999999999999999863 345899999999999999998765421 35899999998764 23579
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|+|++.......+.. -...+++.+++.|+|||+|++.
T Consensus 141 d~v~~~~~l~~~~~~--~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 141 SMVVLNFTLQFLEPS--ERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp EEEEEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceeeeeeeecCch--hHhHHHHHHHHHcCCCcEEEEE
Confidence 999987654332211 1245899999999999999863
No 34
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=9.8e-13 Score=124.29 Aligned_cols=133 Identities=13% Similarity=0.251 Sum_probs=94.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhccccc-CCCCCCCEEEEEcchhhHHhh-----CCC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELA-VGFEDPRVRLHIGDAVEFLRQ-----VPR 232 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~-~~~~d~rv~v~~gD~~~~l~~-----~~~ 232 (387)
.+..+|||||||+|.++..+++..+..+|++||+|+.+++.|++++.... .++ ..+++++.+|+.++... .++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l-~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF-SARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT-GGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC-cceEEEEeCCHHHHhhhhhhhccCC
Confidence 45679999999999999999988766799999999999999999987511 122 23799999999887431 235
Q ss_pred CCeeEEEEcCCCCCCC--------------ccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcC
Q 016578 233 GKYDAIIVDSSDPVGP--------------AQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 297 (387)
Q Consensus 233 ~~fDvII~D~~dp~~~--------------~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~ 297 (387)
++||+|+++++..... .......++++.+.+.|+|||.+++... .....++.+.+++.|.
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-----~~~~~~~~~~l~~~~~ 187 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR-----PQSVAEIIAACGSRFG 187 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC-----GGGHHHHHHHHTTTEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc-----HHHHHHHHHHHHhcCC
Confidence 6899999986542210 0011245789999999999999986432 2234455566655454
No 35
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.43 E-value=6.1e-13 Score=123.00 Aligned_cols=110 Identities=20% Similarity=0.203 Sum_probs=84.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
....+|||||||+|..+..+++.. ..+|++||+++.+++.|+++.... ..+++++.+|+.+.+...++++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 356699999999999999998764 359999999999999999987653 36899999999987655556789999
Q ss_pred EEcCCCCCCCcccc-chHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQEL-VEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L-~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++|......+..+. ....+++.++++|||||+|++.
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 99643321111111 1235789999999999999864
No 36
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.43 E-value=2.2e-12 Score=118.15 Aligned_cols=150 Identities=17% Similarity=0.198 Sum_probs=101.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCC----C
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR----G 233 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~----~ 233 (387)
.++++|||||||+|..+..+++. ++..+|++||+++.+++.|++++.... + .++++++.+|+.+++..... +
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~l~~~~~~~~~~ 133 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG--L-QDKVTILNGASQDLIPQLKKKYDVD 133 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--C-GGGEEEEESCHHHHGGGTTTTSCCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC--C-CCceEEEECCHHHHHHHHHHhcCCC
Confidence 35789999999999999999986 335799999999999999999987652 2 34799999999988765432 5
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeec---c
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPT---Y 310 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPt---y 310 (387)
+||+|++|....... -..++++.+ +.|+|||++++.... +... ..+.+.+++. + .+....+|+ |
T Consensus 134 ~fD~V~~d~~~~~~~----~~~~~~~~~-~~LkpgG~lv~~~~~-~~~~---~~~~~~l~~~-~---~~~~~~~~~~~~~ 200 (221)
T 3u81_A 134 TLDMVFLDHWKDRYL----PDTLLLEKC-GLLRKGTVLLADNVI-VPGT---PDFLAYVRGS-S---SFECTHYSSYLEY 200 (221)
T ss_dssp CCSEEEECSCGGGHH----HHHHHHHHT-TCCCTTCEEEESCCC-CCCC---HHHHHHHHHC-T---TEEEEEEEEEETT
T ss_pred ceEEEEEcCCcccch----HHHHHHHhc-cccCCCeEEEEeCCC-Ccch---HHHHHHHhhC-C---CceEEEccccccc
Confidence 899999986432111 122466666 999999999974322 2222 2333444432 2 233344453 2
Q ss_pred CCCcEEEEEEecCC
Q 016578 311 PSGIIGFLICSTEG 324 (387)
Q Consensus 311 p~g~~gf~~ask~~ 324 (387)
....-||.++.+..
T Consensus 201 ~~~~dG~~~~~~~g 214 (221)
T 3u81_A 201 MKVVDGLEKAIYQG 214 (221)
T ss_dssp TTEEEEEEEEEECC
T ss_pred CCCCCceEEEEEeC
Confidence 22234788876653
No 37
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.42 E-value=7.8e-13 Score=123.47 Aligned_cols=119 Identities=20% Similarity=0.210 Sum_probs=89.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccC--CCCCCCEEEEEcchhhHHhh-CCCCCe
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV--GFEDPRVRLHIGDAVEFLRQ-VPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~--~~~d~rv~v~~gD~~~~l~~-~~~~~f 235 (387)
.+..+|||||||+|.++..+++..+...|++||+++.+++.|++++..+.. ....++++++.+|+.+++.. .++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 345689999999999999999887677999999999999999987643210 01235799999999875542 345789
Q ss_pred eEEEEcCCCCCCC----ccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 236 DAIIVDSSDPVGP----AQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 236 DvII~D~~dp~~~----~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
|.|++..++|+.. ...+....+++.+.++|+|||+|++.++.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 9999988877632 22344568999999999999999986543
No 38
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.42 E-value=2.9e-12 Score=118.75 Aligned_cols=148 Identities=19% Similarity=0.320 Sum_probs=104.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCC--C--C
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP--R--G 233 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~--~--~ 233 (387)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+++...+ + +
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA--GV-AEKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TC-GGGEEEEESCHHHHHHHHHTSSSCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 3567999999999999999998743 569999999999999999988654 22 3589999999988765431 2 6
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccch--------hhhHHHHHHHHHHHHcCCCcceEEE
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL--------HTHLIEDMISICRETFKGSVHYAWA 305 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--------~~~~~~~~~~~l~~~F~~~v~~~~~ 305 (387)
+||+|++|...+ ...++++.+.+.|+|||++++... .|. .....+.+.+..+.+.. ...+..+
T Consensus 148 ~fD~V~~d~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~ 218 (232)
T 3cbg_A 148 EFDLIFIDADKR-------NYPRYYEIGLNLLRRGGLMVIDNV-LWHGKVTEVDPQEAQTQVLQQFNRDLAQ-DERVRIS 218 (232)
T ss_dssp CEEEEEECSCGG-------GHHHHHHHHHHTEEEEEEEEEECT-TGGGGGGCSSCCSHHHHHHHHHHHHHTT-CTTEEEE
T ss_pred CcCEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEeCC-CcCCccCCcccCChHHHHHHHHHHHHhh-CCCeEEE
Confidence 899999986421 135689999999999999987421 121 11233344444444554 3455566
Q ss_pred EeeccCCCcEEEEEEec
Q 016578 306 SVPTYPSGIIGFLICST 322 (387)
Q Consensus 306 ~iPtyp~g~~gf~~ask 322 (387)
.+|... ||.++.|
T Consensus 219 ~lp~~d----G~~~~~~ 231 (232)
T 3cbg_A 219 VIPLGD----GMTLALK 231 (232)
T ss_dssp EECSBT----CEEEEEE
T ss_pred EEEcCC----eEEEEEe
Confidence 677642 4666654
No 39
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.42 E-value=3.3e-12 Score=120.06 Aligned_cols=127 Identities=15% Similarity=0.166 Sum_probs=93.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
++.+|||||||+|.++..+++..+ .+|++||+|+.+++.|++++... ++ ..+++++.+|+.++....+.++||+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~--~~-~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYN--QL-EDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHT--TC-TTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHC--CC-cccEEEEECcHHHhhhhhccCCccEEE
Confidence 577999999999999999998864 39999999999999999998754 22 348999999999886544457899999
Q ss_pred EcCCCCCC----Ccc------------ccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH
Q 016578 240 VDSSDPVG----PAQ------------ELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 295 (387)
Q Consensus 240 ~D~~dp~~----~~~------------~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~ 295 (387)
+|.+.... ... .....++++.+.+.|+|||++++.. ......++...+++.
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-----~~~~~~~~~~~l~~~ 191 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH-----RPERLLDIIDIMRKY 191 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE-----CTTTHHHHHHHHHHT
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE-----cHHHHHHHHHHHHHC
Confidence 98653111 000 0112469999999999999998732 223345555666553
No 40
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.42 E-value=3.6e-12 Score=114.94 Aligned_cols=120 Identities=16% Similarity=0.139 Sum_probs=93.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+..+|||||||+|.++..+++..+..+|+++|+|+.+++.+++++... ++ ++++++.+|+.+.+.. .++||+|
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~~~~--~~~~D~i 112 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF--VA--RNVTLVEAFAPEGLDD--LPDPDRV 112 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH--TC--TTEEEEECCTTTTCTT--SCCCSEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEeCChhhhhhc--CCCCCEE
Confidence 4567999999999999999999876789999999999999999988765 22 5899999998776543 2579999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 295 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~ 295 (387)
+++.... ...++++.+.+.|+|||++++.... ......+.+.+++.
T Consensus 113 ~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 113 FIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVT----LDTLTKAVEFLEDH 158 (204)
T ss_dssp EESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECB----HHHHHHHHHHHHHT
T ss_pred EECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecc----cccHHHHHHHHHHC
Confidence 9887543 2446999999999999999975422 12334455555544
No 41
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.41 E-value=4.5e-13 Score=121.55 Aligned_cols=108 Identities=17% Similarity=0.242 Sum_probs=84.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCC-eeEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK-YDAI 238 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~-fDvI 238 (387)
+..+|||+|||+|.++.++++.. ..+|++||+|+.+++.|++++... ++.+++++++.+|+.+++....+++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTL--KCSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHT--TCCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHh--CCCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 45799999999999999977764 469999999999999999998654 2222589999999998865433468 9999
Q ss_pred EEcCCCCCCCccccchHHHHHHH--HHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTI--AKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l--~~~LkpgGvlv~q~ 275 (387)
++|.+.... ...++++.+ .+.|+|||++++..
T Consensus 130 ~~~~~~~~~-----~~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 130 FLDPPFHFN-----LAEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp EECCCSSSC-----HHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred EECCCCCCc-----cHHHHHHHHHhcCccCCCcEEEEEE
Confidence 998763211 134577777 55799999998754
No 42
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.41 E-value=1.4e-12 Score=120.93 Aligned_cols=149 Identities=19% Similarity=0.305 Sum_probs=103.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-------
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV------- 230 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~------- 230 (387)
.++++|||||||+|..+..+++..+ ..+|++||+|+.+++.|++++... ++ +.+++++.+|+.+++...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~-~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN--GL-ENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCCEEEEECCHHHHHHHHHhhcccc
Confidence 3577999999999999999998743 579999999999999999998654 22 247999999998876532
Q ss_pred ------C-C-CCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchh--------hhHHHHHHHHHHH
Q 016578 231 ------P-R-GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLH--------THLIEDMISICRE 294 (387)
Q Consensus 231 ------~-~-~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~--------~~~~~~~~~~l~~ 294 (387)
+ + ++||+|+++...+ ...++++.+.+.|+|||++++... .|.. ......+.+..+.
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 207 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADNV-LWDGSVADLSHQEPSTVGIRKFNEL 207 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECS-SGGGGGGCTTCCCHHHHHHHHHHHH
T ss_pred cccccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEcc-ccCCcccCccccchHHHHHHHHHHH
Confidence 1 1 6899999985321 134689999999999999987431 1111 1222233333333
Q ss_pred HcCCCcceEEEEeeccCCCcEEEEEEecC
Q 016578 295 TFKGSVHYAWASVPTYPSGIIGFLICSTE 323 (387)
Q Consensus 295 ~F~~~v~~~~~~iPtyp~g~~gf~~ask~ 323 (387)
+.. ...+....+|..+ |+.++.|.
T Consensus 208 ~~~-~~~~~~~~~p~~~----g~~~~~~~ 231 (239)
T 2hnk_A 208 VYN-DSLVDVSLVPIAD----GVSLVRKR 231 (239)
T ss_dssp HHH-CTTEEEEEECSTT----CEEEEEEC
T ss_pred Hhh-CCCeEEEEEEcCC----ceEeeeeh
Confidence 333 3356667788764 36666665
No 43
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.41 E-value=4.8e-12 Score=112.03 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=82.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
++..+|||||||+|..+..+++. ..+|++||+|+.+++.|++++... ++ ++++++.+|..... ...+++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~--~~--~~v~~~~~~~~~l~-~~~~~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDL--GI--ENTELILDGHENLD-HYVREPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHH--TC--CCEEEEESCGGGGG-GTCCSCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc--CC--CcEEEEeCcHHHHH-hhccCCcCEE
Confidence 45679999999999999999988 479999999999999999998765 22 58999997776542 2235689999
Q ss_pred EEcCCC-CCCCc----cccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSD-PVGPA----QELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~d-p~~~~----~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+++... +.... ..-....+++.+.+.|+|||++++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 987421 21110 11113467899999999999988643
No 44
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.40 E-value=3.5e-12 Score=111.54 Aligned_cols=104 Identities=21% Similarity=0.190 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..+.+|||||||+|..+..+++..+..+|+++|+++.+++.+++++.... + +.++ ++.+|+.+.+... .++||+|
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~~-~~~~d~~~~~~~~-~~~~D~i 98 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG--V-SDRI-AVQQGAPRAFDDV-PDNPDVI 98 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT--C-TTSE-EEECCTTGGGGGC-CSCCSEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC--C-CCCE-EEecchHhhhhcc-CCCCCEE
Confidence 45569999999999999999988667899999999999999999876542 2 2378 8889987766543 3689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+++..... ..+++.+.+.|+|||++++..
T Consensus 99 ~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 99 FIGGGLTA--------PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp EECC-TTC--------TTHHHHHHHTCCTTCEEEEEE
T ss_pred EECCcccH--------HHHHHHHHHhcCCCCEEEEEe
Confidence 98765432 358999999999999998754
No 45
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.40 E-value=4.2e-13 Score=127.17 Aligned_cols=98 Identities=19% Similarity=0.300 Sum_probs=80.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+...+|||||||+|..++.++++. .+|++||+|+.+++.|++ .++++++++|+.+. ..++++||+|
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~--~~~~~sfD~v 103 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDT--GLPPASVDVA 103 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCC--CCCSSCEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhh--cccCCcccEE
Confidence 456799999999999999999885 689999999999987654 36899999998764 2346799999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++...-++.. ...++++++++|||||+|++..
T Consensus 104 ~~~~~~h~~~-----~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 104 IAAQAMHWFD-----LDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp EECSCCTTCC-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeeehhHhh-----HHHHHHHHHHHcCCCCEEEEEE
Confidence 9866554433 3469999999999999998754
No 46
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.39 E-value=2.7e-12 Score=126.07 Aligned_cols=112 Identities=21% Similarity=0.231 Sum_probs=85.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC--CCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~--~~~~fD 236 (387)
.++.+|||+|||+|.++..+++.. .+|++||+|+.+++.|++++... ++++.+++++.+|+++++... ..++||
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~--gl~~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLA--GLEQAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHH--TCTTSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECcHHHHHHHHHhcCCCce
Confidence 346799999999999999999874 39999999999999999998765 334446999999999987532 135899
Q ss_pred EEEEcCCC-CCCCcccc-----chHHHHHHHHHhccCCCeEEec
Q 016578 237 AIIVDSSD-PVGPAQEL-----VEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 237 vII~D~~d-p~~~~~~L-----~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+||+|.+. ...+...+ ...++++.+.+.|+|||++++.
T Consensus 228 ~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~ 271 (332)
T 2igt_A 228 IILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVL 271 (332)
T ss_dssp EEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEE
T ss_pred EEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 99998763 11111111 1246889999999999996643
No 47
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.38 E-value=3.9e-12 Score=121.42 Aligned_cols=145 Identities=13% Similarity=0.090 Sum_probs=102.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+.++|||+|||+|.++..+++.... +|+++|+|+.+++.|++++... ++ +.+++++.+|+.+++. +++||+|
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n--~~-~~~v~~~~~D~~~~~~---~~~fD~V 196 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLN--KV-EDRMSAYNMDNRDFPG---ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHT--TC-TTTEEEECSCTTTCCC---CSCEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHc--CC-CceEEEEECCHHHhcc---cCCccEE
Confidence 45679999999999999999998643 8999999999999999997654 22 3479999999988764 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccccc--chhhhHHHHHHHHHHHHcCCCcce-EEEEeeccCCCcE
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESM--WLHTHLIEDMISICRETFKGSVHY-AWASVPTYPSGII 315 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~--~~~~~~~~~~~~~l~~~F~~~v~~-~~~~iPtyp~g~~ 315 (387)
++|.+.. ..++++.+.+.|+|||++++...++ .........+.+.+++..- .+.. ....+..|..+.|
T Consensus 197 i~~~p~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~-~~~~~~~~~v~~~~p~~~ 267 (278)
T 2frn_A 197 LMGYVVR--------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGY-DVEKLNELKIKRYAPGVW 267 (278)
T ss_dssp EECCCSS--------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC-EEEEEEEEEEEEETTTEE
T ss_pred EECCchh--------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCC-eeEEeeeEEEEecCCCce
Confidence 9976521 2358999999999999999765443 2223455566666555432 2221 1122455544555
Q ss_pred EEEE
Q 016578 316 GFLI 319 (387)
Q Consensus 316 gf~~ 319 (387)
-+++
T Consensus 268 h~~~ 271 (278)
T 2frn_A 268 HVVL 271 (278)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 48
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.38 E-value=4.5e-13 Score=118.22 Aligned_cols=119 Identities=13% Similarity=0.121 Sum_probs=88.1
Q ss_pred HHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH
Q 016578 147 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 226 (387)
Q Consensus 147 ~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~ 226 (387)
..++..+.- ...+.+|||+|||+|..+..+++.+ ..+|++||+|+.+++.|++++.... + .++++++.+|+.++
T Consensus 33 ~~~~~~l~~--~~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 33 ESIFNMIGP--YFDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITK--E-PEKFEVRKMDANRA 106 (187)
T ss_dssp HHHHHHHCS--CCSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHT--C-GGGEEEEESCHHHH
T ss_pred HHHHHHHHh--hcCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhC--C-CcceEEEECcHHHH
Confidence 444444421 2356799999999999999988864 5699999999999999999886541 1 24899999999987
Q ss_pred HhhC--CCCCeeEEEEcCCCCCCCccccchHHHHHHH--HHhccCCCeEEeccc
Q 016578 227 LRQV--PRGKYDAIIVDSSDPVGPAQELVEKPFFDTI--AKALRPGGVLCNMAE 276 (387)
Q Consensus 227 l~~~--~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l--~~~LkpgGvlv~q~~ 276 (387)
+... ..++||+|++|.+.... ...+.++.+ .++|+|||++++...
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~~~-----~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYAKQ-----EIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGGGC-----CHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHHhcCCCCCEEEECCCCCch-----hHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 6432 14689999988652211 134566777 788999999987543
No 49
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.38 E-value=7.6e-13 Score=116.43 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||+|||+|..+..+++. +..+|+++|+|+.+++.+++++.... + .++++++.+|+.+++... +++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~~~~~-~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTK--A-ENRFTLLKMEAERAIDCL-TGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTT--C-GGGEEEECSCHHHHHHHB-CSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC--C-CCceEEEECcHHHhHHhh-cCCCCEE
Confidence 45679999999999999999988 45799999999999999999886541 1 247999999999977654 4579999
Q ss_pred EEcCCCCCCCccccchHHHHHHHH--HhccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIA--KALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~--~~LkpgGvlv~q~~ 276 (387)
++|.+.. . ....++++.+. +.|+|||++++...
T Consensus 105 ~~~~~~~--~---~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 105 FLDPPYA--K---ETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp EECCSSH--H---HHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EECCCCC--c---chHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 9885421 1 11345777777 89999999997653
No 50
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.37 E-value=3.5e-12 Score=123.31 Aligned_cols=104 Identities=16% Similarity=0.233 Sum_probs=82.9
Q ss_pred cCCCCCCEEEEEcCcccHHH-HHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCC
Q 016578 156 CSIPSPKTVLVVGGGDGGVL-REISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK 234 (387)
Q Consensus 156 ~~~~~p~~VL~IG~G~G~~~-~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~ 234 (387)
+..+.+.+|||||||+|+.+ ..+++.. ..+|++||+|+++++.|++++... ++ .+++++.+|+.++. ++.
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~--gl--~~v~~v~gDa~~l~----d~~ 188 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGL--GV--DGVNVITGDETVID----GLE 188 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHH--TC--CSEEEEESCGGGGG----GCC
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhc--CC--CCeEEEECchhhCC----CCC
Confidence 34567889999999998765 4455544 579999999999999999998765 33 58999999998852 468
Q ss_pred eeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 235 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 235 fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
||+|+++..- + -..++++.+.+.|+|||+|++..
T Consensus 189 FDvV~~~a~~---~----d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 189 FDVLMVAALA---E----PKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CSEEEECTTC---S----CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred cCEEEECCCc---c----CHHHHHHHHHHHcCCCcEEEEEc
Confidence 9999987541 1 13469999999999999999754
No 51
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.37 E-value=1.3e-11 Score=114.61 Aligned_cols=149 Identities=11% Similarity=0.038 Sum_probs=102.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~fDv 237 (387)
+++.+|||||||+|..+..+++..+..+|++||+++.+++.+++++... ++ ++++++.+|+.++... ...++||+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL--QL--ENTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--TC--SSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--CC--CCEEEEeccHHHhcccccccCCccE
Confidence 4567999999999999999987555679999999999999999987655 22 3699999999886421 11468999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH-cCCCcceEEEEeeccCCCcEE
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIG 316 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~iPtyp~g~~g 316 (387)
|+++... . ...+++.+.+.|+|||++++..... ....+..+.+.++.. |. ........+|.. .+.+.
T Consensus 145 V~~~~~~---~-----~~~~l~~~~~~LkpgG~l~~~~g~~--~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~-~~~~~ 212 (240)
T 1xdz_A 145 VTARAVA---R-----LSVLSELCLPLVKKNGLFVALKAAS--AEEELNAGKKAITTLGGE-LENIHSFKLPIE-ESDRN 212 (240)
T ss_dssp EEEECCS---C-----HHHHHHHHGGGEEEEEEEEEEECC---CHHHHHHHHHHHHHTTEE-EEEEEEEECTTT-CCEEE
T ss_pred EEEeccC---C-----HHHHHHHHHHhcCCCCEEEEEeCCC--chHHHHHHHHHHHHcCCe-EeEEEEEecCCC-CCceE
Confidence 9987631 1 3468999999999999998753221 122344455555543 32 222222223322 35677
Q ss_pred EEEEecC
Q 016578 317 FLICSTE 323 (387)
Q Consensus 317 f~~ask~ 323 (387)
+++..|.
T Consensus 213 l~~~~k~ 219 (240)
T 1xdz_A 213 IMVIRKI 219 (240)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7777765
No 52
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.36 E-value=4.1e-12 Score=118.49 Aligned_cols=117 Identities=21% Similarity=0.308 Sum_probs=90.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCC----CCCCCEEEEEcchhhHHhh-CCCCC
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG----FEDPRVRLHIGDAVEFLRQ-VPRGK 234 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~----~~d~rv~v~~gD~~~~l~~-~~~~~ 234 (387)
+..+|||||||+|.++..+++..+..+|++||+++.+++.+++++...... ..-++++++.+|+.+++.. ...+.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 456899999999999999999876679999999999999999886543100 0124799999999886653 24568
Q ss_pred eeEEEEcCCCCCCC----ccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 235 YDAIIVDSSDPVGP----AQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 235 fDvII~D~~dp~~~----~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+|.|++..++|+.. ...+...++++.+.++|+|||+|++.+.
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 99999887776532 1233456899999999999999997543
No 53
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.36 E-value=2.1e-12 Score=117.16 Aligned_cols=105 Identities=17% Similarity=0.141 Sum_probs=83.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
...+|||+|||+|.++.++++.. ..+|++||+|+.+++.|++++... ++ ++++++.+|+.+++.. ..++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~--~~--~~v~~~~~D~~~~~~~-~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATL--KA--GNARVVNSNAMSFLAQ-KGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHT--TC--CSEEEECSCHHHHHSS-CCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHc--CC--CcEEEEECCHHHHHhh-cCCCCCEEE
Confidence 45799999999999999987764 359999999999999999998754 22 5899999999998754 346899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHH--hccCCCeEEecc
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAK--ALRPGGVLCNMA 275 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~--~LkpgGvlv~q~ 275 (387)
+|.+.... ...++++.+.+ .|+|||++++..
T Consensus 128 ~~~p~~~~-----~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 128 VDPPFRRG-----LLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp ECCSSSTT-----THHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred ECCCCCCC-----cHHHHHHHHHhcCccCCCcEEEEEE
Confidence 98763221 13457777766 499999998754
No 54
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.35 E-value=1.7e-11 Score=111.58 Aligned_cols=117 Identities=18% Similarity=0.189 Sum_probs=90.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
....+|||||||+|.++.++++. ..+|++||+++.+++.|++++.... +. .+++++.+|+.+.+... ..||+|
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g--~~-~~v~~~~~d~~~~~~~~--~~~D~v 126 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYG--LS-PRMRAVQGTAPAALADL--PLPEAV 126 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT--CT-TTEEEEESCTTGGGTTS--CCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC--CC-CCEEEEeCchhhhcccC--CCCCEE
Confidence 45679999999999999999988 4699999999999999999876542 22 28999999998866543 479999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 295 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~ 295 (387)
+++... ... +++.+.+.|+|||++++...+ .+....+.+.+++.
T Consensus 127 ~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 127 FIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVT----LESETLLTQLHARH 170 (204)
T ss_dssp EECSCC--------CHH-HHHHHHHHSCTTCEEEEEECS----HHHHHHHHHHHHHH
T ss_pred EECCcc--------cHH-HHHHHHHhcCCCcEEEEEecC----cccHHHHHHHHHhC
Confidence 987632 133 899999999999999975533 23344555555554
No 55
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.35 E-value=8.8e-12 Score=111.44 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
++..+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++.... + .++++++.+|+.++.... +++||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~-~~~fD~ 96 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN--L-IDRVTLIKDGHQNMDKYI-DCPVKA 96 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT--C-GGGEEEECSCGGGGGGTC-CSCEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCCeEEEECCHHHHhhhc-cCCceE
Confidence 456799999999999999999872 34699999999999999999986541 1 358999999998765333 468999
Q ss_pred EEEcCCC-CCCCc----cccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSD-PVGPA----QELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~d-p~~~~----~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+++.+. |.... ......++++.+.+.|+|||++++..
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 9988643 21111 01112469999999999999988653
No 56
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.35 E-value=4.1e-12 Score=117.03 Aligned_cols=106 Identities=22% Similarity=0.372 Sum_probs=86.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCC-CCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~-~~~fDv 237 (387)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++.... + .++++++.+|+.+++.... +++||+
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG--L-ESRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT--C-TTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCcEEEEECCHHHHHHhcccCCCccE
Confidence 35679999999999999999988656799999999999999999986542 2 3579999999988654431 358999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|+++...+ ....+++.+.+.|+|||++++.
T Consensus 130 I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 130 LFIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 99986532 2356899999999999999874
No 57
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.35 E-value=7e-12 Score=116.43 Aligned_cols=106 Identities=14% Similarity=0.079 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++..+. +|+++|+++.+++.+++++.... + ..+++++.+|+.++. .++++||+|
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~~--~~~~~fD~v 118 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKAN--C-ADRVKGITGSMDNLP--FQNEELDLI 118 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTT--C-TTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcC--C-CCceEEEECChhhCC--CCCCCEEEE
Confidence 45679999999999999999998653 99999999999999999887542 2 347999999986542 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++...-.... ...+++.+++.|+|||++++..
T Consensus 119 ~~~~~l~~~~-----~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 119 WSEGAIYNIG-----FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EEESCSCCCC-----HHHHHHHHHTTEEEEEEEEEEE
T ss_pred EecChHhhcC-----HHHHHHHHHHHcCCCcEEEEEE
Confidence 9875432221 4569999999999999998754
No 58
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.35 E-value=4.8e-12 Score=113.81 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=83.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
++.+|||||||+|..+..+++. +..+|+++|+++.+++.+++++..... .++++++.+|+.+.. .++++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~--~~~~~~D~v~ 116 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANL---NDRIQIVQGDVHNIP--IEDNYADLIV 116 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECBTTBCS--SCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccc---cCceEEEEcCHHHCC--CCcccccEEE
Confidence 3449999999999999999998 457999999999999999999865421 358999999987642 3357899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+.......+ ....+++.+++.|+|||++++.
T Consensus 117 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 117 SRGSVFFWE----DVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECchHhhcc----CHHHHHHHHHHhCCCCCEEEEE
Confidence 875432221 1356999999999999998874
No 59
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.35 E-value=2.1e-12 Score=115.80 Aligned_cols=152 Identities=16% Similarity=0.167 Sum_probs=86.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh--CCCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ--VPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~--~~~~~fD 236 (387)
.++.+|||+|||+|..+..+++..+..+|+++|+|+.+++.+++++... ..+++++.+|+.+.+.. ...++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF-----GAVVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh-----CCceEEEEcchHhhhhhhhhccCccc
Confidence 5677999999999999999999876679999999999999999988654 12789999999986653 1136899
Q ss_pred EEEEcCCCCCCC-c----cc---------c--------chHHHHHHHHHhccCCCe-EEecccccchhhhHHHHHHHHHH
Q 016578 237 AIIVDSSDPVGP-A----QE---------L--------VEKPFFDTIAKALRPGGV-LCNMAESMWLHTHLIEDMISICR 293 (387)
Q Consensus 237 vII~D~~dp~~~-~----~~---------L--------~~~ef~~~l~~~LkpgGv-lv~q~~s~~~~~~~~~~~~~~l~ 293 (387)
+|++|.+..... . .. + +...+++.+++.|+|||+ +++... +.....+..+++.++
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~~ 181 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG--HNQADEVARLFAPWR 181 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT--TSCHHHHHHHTGGGG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC--CccHHHHHHHHHHhh
Confidence 999986542111 0 00 0 015788999999999999 665332 223333333333223
Q ss_pred HHcCCCcceEEEEeeccCCCcEEEEEEecC
Q 016578 294 ETFKGSVHYAWASVPTYPSGIIGFLICSTE 323 (387)
Q Consensus 294 ~~F~~~v~~~~~~iPtyp~g~~gf~~ask~ 323 (387)
.-|. .+. ..+.+. |...++++.+.
T Consensus 182 ~gf~-~~~----~~~~~~-~~~r~~~~~~~ 205 (215)
T 4dzr_A 182 ERGF-RVR----KVKDLR-GIDRVIAVTRE 205 (215)
T ss_dssp GGTE-ECC----EEECTT-SCEEEEEEEEC
T ss_pred cCCc-eEE----EEEecC-CCEEEEEEEEc
Confidence 3353 222 234443 45667777765
No 60
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.34 E-value=5.2e-12 Score=118.58 Aligned_cols=106 Identities=16% Similarity=0.137 Sum_probs=85.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++. +..+|++||+++.+++.+++++.... + .++++++.+|+.+.. .++++||+|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~--~~~~~fD~i 118 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG--L-QNRVTGIVGSMDDLP--FRNEELDLI 118 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT--C-TTTEEEEECCTTSCC--CCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC--C-CcCcEEEEcChhhCC--CCCCCEEEE
Confidence 56789999999999999999998 45699999999999999999876542 2 358999999987642 235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++....... -...+++.+++.|+|||++++..
T Consensus 119 ~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 119 WSEGAIYNI-----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp EESSCGGGT-----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEcCCceec-----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 986543211 24579999999999999998764
No 61
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.34 E-value=4.2e-12 Score=116.27 Aligned_cols=127 Identities=15% Similarity=0.157 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCc-ccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G-~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
++..+||||||| +|.++..+++.. ..+|+++|+|+.+++.|++++... ..+++++.+|+..+. ..++++||+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~-~~~~~~fD~ 126 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN-----NSNVRLVKSNGGIIK-GVVEGTFDV 126 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT-----TCCCEEEECSSCSST-TTCCSCEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh-----CCCcEEEeCCchhhh-hcccCceeE
Confidence 467899999999 999999999874 479999999999999999998754 227999999975332 223478999
Q ss_pred EEEcCCCCCCCc---------------cccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH
Q 016578 238 IIVDSSDPVGPA---------------QELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 295 (387)
Q Consensus 238 II~D~~dp~~~~---------------~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~ 295 (387)
|+++.+...... .......+++.+.+.|+|||++++...+.. .....+.+.+++.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~~l~~~ 196 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---KLLNVIKERGIKL 196 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---HHHHHHHHHHHHT
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---hHHHHHHHHHHHc
Confidence 999865422111 001126799999999999999987543221 3345555555554
No 62
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.33 E-value=1.2e-11 Score=113.36 Aligned_cols=105 Identities=15% Similarity=0.221 Sum_probs=84.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++..+..+|+++|+++.+++.+++.++.. ++++++.+|+.+... .++||+|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~~---~~~fD~v 113 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN------LKVKYIEADYSKYDF---EEKYDMV 113 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC------TTEEEEESCTTTCCC---CSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC------CCEEEEeCchhccCC---CCCceEE
Confidence 4567999999999999999999866689999999999999999998643 389999999877532 3689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++.......+. ....++++.++++|+|||++++.
T Consensus 114 ~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 147 (234)
T 3dtn_A 114 VSALSIHHLED--EDKKELYKRSYSILKESGIFINA 147 (234)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeCccccCCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 98754322221 11235899999999999999864
No 63
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.33 E-value=1.4e-11 Score=116.00 Aligned_cols=149 Identities=13% Similarity=0.114 Sum_probs=104.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~fDv 237 (387)
+.+.+|||||||+|..+..+++..+..+|++||+++.+++.++++.... ++ .+++++.+|+.++... ...++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~l--~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVL--GL--KGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--TC--SSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh--CC--CceEEEECcHHHhhcccccCCCceE
Confidence 4567999999999999999998766789999999999999999998765 22 3599999999887532 12368999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH-cCCCcceEEEEeeccCCCcEE
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIG 316 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~iPtyp~g~~g 316 (387)
|++....+ -..+++.+.+.|+|||.+++..+. +. .+.+..+.+.++.. |. ........+|... +...
T Consensus 155 I~s~a~~~--------~~~ll~~~~~~LkpgG~l~~~~g~-~~-~~e~~~~~~~l~~~G~~-~~~~~~~~~p~~~-~~R~ 222 (249)
T 3g89_A 155 AVARAVAP--------LCVLSELLLPFLEVGGAAVAMKGP-RV-EEELAPLPPALERLGGR-LGEVLALQLPLSG-EARH 222 (249)
T ss_dssp EEEESSCC--------HHHHHHHHGGGEEEEEEEEEEECS-CC-HHHHTTHHHHHHHHTEE-EEEEEEEECTTTC-CEEE
T ss_pred EEECCcCC--------HHHHHHHHHHHcCCCeEEEEEeCC-Cc-HHHHHHHHHHHHHcCCe-EEEEEEeeCCCCC-CcEE
Confidence 99875421 246899999999999998864432 21 22334444444443 33 3333334555432 3456
Q ss_pred EEEEecC
Q 016578 317 FLICSTE 323 (387)
Q Consensus 317 f~~ask~ 323 (387)
+++..|.
T Consensus 223 l~~~~k~ 229 (249)
T 3g89_A 223 LVVLEKT 229 (249)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 6666664
No 64
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.32 E-value=8e-12 Score=124.91 Aligned_cols=133 Identities=13% Similarity=0.099 Sum_probs=95.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC--CCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~--~~~~fD 236 (387)
...++|||+|||+|.++..+++.. ..+|++||+++.+++.|++++... ++++.+++++.+|+.+++... ..++||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n--~~~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEAN--HLDMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHT--TCCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHHhCCCcc
Confidence 356799999999999999999864 469999999999999999998755 333338999999999987542 235899
Q ss_pred EEEEcCCCCC---CCccc--cchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcC
Q 016578 237 AIIVDSSDPV---GPAQE--LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 297 (387)
Q Consensus 237 vII~D~~dp~---~~~~~--L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~ 297 (387)
+|++|++.-. +.... -...++++.+.+.|+|||++++...+.....+ .+.+.+++.+.
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~---~~~~~i~~~~~ 350 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVS---QFKKQIEKGFG 350 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHH---HHHHHHHHHHT
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHH---HHHHHHHHHHH
Confidence 9999976521 11111 11234677889999999999887655544333 33444455544
No 65
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.32 E-value=7.8e-12 Score=116.44 Aligned_cols=118 Identities=20% Similarity=0.286 Sum_probs=92.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
.++.+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++.... + +.+++++.+|+.+.+ ++++||+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~---~~~~~D~ 165 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG--F-DDRVTIKLKDIYEGI---EEENVDH 165 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT--C-TTTEEEECSCGGGCC---CCCSEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC--C-CCceEEEECchhhcc---CCCCcCE
Confidence 45679999999999999999988 666899999999999999999986552 2 346999999998653 3567999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 295 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~ 295 (387)
|++|.+++ .++++.+.+.|+|||++++...+. .....+.+.+++.
T Consensus 166 v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 166 VILDLPQP---------ERVVEHAAKALKPGGFFVAYTPCS----NQVMRLHEKLREF 210 (255)
T ss_dssp EEECSSCG---------GGGHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHHT
T ss_pred EEECCCCH---------HHHHHHHHHHcCCCCEEEEEECCH----HHHHHHHHHHHHc
Confidence 99987653 247999999999999998754321 2344555556554
No 66
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.32 E-value=1.1e-11 Score=118.76 Aligned_cols=108 Identities=17% Similarity=0.085 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+..+|||||||+|..+..+++..+ .+|+++|+++.+++.+++++... ++ ..+++++.+|+.++ +++||+|
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-----~~~fD~v 141 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEV--DS-PRRKEVRIQGWEEF-----DEPVDRI 141 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHS--CC-SSCEEEEECCGGGC-----CCCCSEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEECCHHHc-----CCCccEE
Confidence 4567999999999999999998844 68999999999999999998654 22 34899999998765 4689999
Q ss_pred EEcCCCCCCC-c----cccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGP-A----QELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~-~----~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.......+ + ..-....+++.+.++|+|||+++++.
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9764322111 1 11123579999999999999999765
No 67
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.32 E-value=3.3e-12 Score=110.80 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=81.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC--CCCCeeE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~--~~~~fDv 237 (387)
+.++|||+|||+|..+..++++.. +|+++|+|+.+++.+++++... + .+++++.+|+.+++... ..++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~--~---~~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRT--G---LGARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHH--T---CCCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHc--C---CceEEEeccHHHHHHhhhccCCceEE
Confidence 567999999999999999998853 4999999999999999998765 1 17999999998876432 1247999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHH--HhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIA--KALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~--~~LkpgGvlv~q~ 275 (387)
|+++.+.. .. ..++++.+. +.|+|||++++..
T Consensus 114 i~~~~~~~-~~-----~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 114 AFMAPPYA-MD-----LAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp EEECCCTT-SC-----TTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred EEECCCCc-hh-----HHHHHHHHHhhcccCCCcEEEEEe
Confidence 99987543 11 234677777 9999999998754
No 68
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.30 E-value=9.6e-12 Score=124.04 Aligned_cols=134 Identities=15% Similarity=0.193 Sum_probs=95.7
Q ss_pred HHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCC-CCCEEEEEcchhhHH
Q 016578 149 MIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE-DPRVRLHIGDAVEFL 227 (387)
Q Consensus 149 ml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~-d~rv~v~~gD~~~~l 227 (387)
++.+++. ..+.+|||||||+|.++..+++..+..+|++||+|+.+++.+++++.... +. ..+++++.+|+.+.+
T Consensus 214 ll~~l~~---~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ng--l~~~~~v~~~~~D~~~~~ 288 (375)
T 4dcm_A 214 FMQHLPE---NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM--PEALDRCEFMINNALSGV 288 (375)
T ss_dssp HHHTCCC---SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC--GGGGGGEEEEECSTTTTC
T ss_pred HHHhCcc---cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcC--CCcCceEEEEechhhccC
Confidence 4444432 33479999999999999999998767899999999999999999987652 11 236899999988754
Q ss_pred hhCCCCCeeEEEEcCCCCCCC-ccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcC
Q 016578 228 RQVPRGKYDAIIVDSSDPVGP-AQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 297 (387)
Q Consensus 228 ~~~~~~~fDvII~D~~dp~~~-~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~ 297 (387)
++++||+|+++.+...+. .......++++.+.+.|+|||++++...... . ....+++.|.
T Consensus 289 ---~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~---~----~~~~l~~~fg 349 (375)
T 4dcm_A 289 ---EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL---D----YFHKLKKIFG 349 (375)
T ss_dssp ---CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS---C----HHHHHHHHHS
T ss_pred ---CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc---C----HHHHHHHhcC
Confidence 356899999987654321 1112234689999999999999987432211 1 1244566777
No 69
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.29 E-value=2.2e-11 Score=113.04 Aligned_cols=106 Identities=14% Similarity=0.113 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++... .+|+++|+++.+++.+++.+. .++++++.+|+.+.- .++++||+|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v 112 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDIA--IEPDAYNVV 112 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGCC--CCTTCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhCC--CCCCCeEEE
Confidence 3677999999999999999999853 499999999999999999875 368999999987642 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
++........ ....+++.++++|+|||++++...++
T Consensus 113 ~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 113 LSSLALHYIA----SFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp EEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred EEchhhhhhh----hHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 9865432211 13569999999999999999865443
No 70
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.29 E-value=1.1e-11 Score=112.36 Aligned_cols=127 Identities=18% Similarity=0.223 Sum_probs=92.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++.. .++++++.+|+.++. ++++||+|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~---~~~~fD~v 118 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR------WSHISWAATDILQFS---TAELFDLI 118 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT------CSSEEEEECCTTTCC---CSCCEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc------CCCeEEEEcchhhCC---CCCCccEE
Confidence 445799999999999999999884 5999999999999999998864 248999999988764 35789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc-----cchhhhHHHHHHHHHHHHcC
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES-----MWLHTHLIEDMISICRETFK 297 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s-----~~~~~~~~~~~~~~l~~~F~ 297 (387)
++.......+... ....+++.+.+.|+|||++++.... .|........+...+.+.+.
T Consensus 119 ~~~~~l~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (216)
T 3ofk_A 119 VVAEVLYYLEDMT-QMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALT 181 (216)
T ss_dssp EEESCGGGSSSHH-HHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHHSE
T ss_pred EEccHHHhCCCHH-HHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhhcc
Confidence 9864432222100 1135799999999999999874321 13333333445555555665
No 71
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.28 E-value=1.7e-11 Score=114.51 Aligned_cols=114 Identities=15% Similarity=0.265 Sum_probs=86.8
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
+..++..++ ...+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++... ..++++++.+|+.+
T Consensus 26 ~~~l~~~l~---~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~----~~~~v~~~~~d~~~ 96 (260)
T 1vl5_A 26 LAKLMQIAA---LKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGN----GHQQVEYVQGDAEQ 96 (260)
T ss_dssp HHHHHHHHT---CCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCC-C
T ss_pred HHHHHHHhC---CCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEecHHh
Confidence 344555443 2467799999999999999999885 49999999999999999987643 12579999999876
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
. ..++++||+|++.......+. ...+++.++++|+|||++++.
T Consensus 97 l--~~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 97 M--PFTDERFHIVTCRIAAHHFPN----PASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp C--CSCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred C--CCCCCCEEEEEEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEEE
Confidence 4 233578999998754322221 246899999999999999874
No 72
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.28 E-value=3.5e-11 Score=114.05 Aligned_cols=145 Identities=14% Similarity=0.163 Sum_probs=100.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.+++++.... -++++++.+|..+.+. .++||+|
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~----~~~v~~~~~d~~~~~~---~~~fD~I 180 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA----IKNIHILQSDWFSALA---GQQFAMI 180 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCSTTGGGT---TCCEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEcchhhhcc---cCCccEE
Confidence 35679999999999999999987666799999999999999999986552 2479999999987643 4589999
Q ss_pred EEcCCCCCC-------------Ccccc--------chHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH-c
Q 016578 239 IVDSSDPVG-------------PAQEL--------VEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-F 296 (387)
Q Consensus 239 I~D~~dp~~-------------~~~~L--------~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~-F 296 (387)
+++.+.... |...+ ....+++.+.+.|+|||++++... +.... .+.+.+++. |
T Consensus 181 v~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~---~~~~~l~~~Gf 255 (276)
T 2b3t_A 181 VSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG--WQQGE---AVRQAFILAGY 255 (276)
T ss_dssp EECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC--SSCHH---HHHHHHHHTTC
T ss_pred EECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC--chHHH---HHHHHHHHCCC
Confidence 998654211 11111 235688999999999999987532 22222 333334433 5
Q ss_pred CCCcceEEEEeeccCCCcEEEEEEe
Q 016578 297 KGSVHYAWASVPTYPSGIIGFLICS 321 (387)
Q Consensus 297 ~~~v~~~~~~iPtyp~g~~gf~~as 321 (387)
. .+.. .+.+ .|.-.++++.
T Consensus 256 ~-~v~~----~~d~-~g~~r~~~~~ 274 (276)
T 2b3t_A 256 H-DVET----CRDY-GDNERVTLGR 274 (276)
T ss_dssp T-TCCE----EECT-TSSEEEEEEE
T ss_pred c-EEEE----EecC-CCCCcEEEEE
Confidence 4 3332 2233 3566677654
No 73
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.28 E-value=4e-12 Score=115.41 Aligned_cols=108 Identities=13% Similarity=0.084 Sum_probs=78.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhccccc-----C---CCCCCCEEEEEcchhhHHhhC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELA-----V---GFEDPRVRLHIGDAVEFLRQV 230 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~-----~---~~~d~rv~v~~gD~~~~l~~~ 230 (387)
+.+.+|||+|||+|..+..+++.. .+|++||+++.+++.|++...... . .+..++++++++|+.+.....
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCC--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 567899999999999999999884 589999999999999998753200 0 001358999999987753210
Q ss_pred CCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeE
Q 016578 231 PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVL 271 (387)
Q Consensus 231 ~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvl 271 (387)
.++||+|+........+.. ....+++.++++|||||++
T Consensus 99 -~~~fD~v~~~~~l~~l~~~--~~~~~l~~~~r~LkpgG~~ 136 (203)
T 1pjz_A 99 -IGHCAAFYDRAAMIALPAD--MRERYVQHLEALMPQACSG 136 (203)
T ss_dssp -HHSEEEEEEESCGGGSCHH--HHHHHHHHHHHHSCSEEEE
T ss_pred -CCCEEEEEECcchhhCCHH--HHHHHHHHHHHHcCCCcEE
Confidence 1589999965432221211 1345899999999999983
No 74
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.28 E-value=2e-11 Score=112.76 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.. .+|+++|+|+.+++.+++. ++++.+|+.+++...++++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEG--IESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHT--CCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCC--CcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 456899999999999999999874 4799999999999998875 57888999988755556799999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
++...-...+.. ....+++.++++|+|||++++...+
T Consensus 106 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 106 MISHFVEHLDPE--RLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEESCGGGSCGG--GHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EECCchhhCCcH--HHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 976443222211 1257999999999999999876543
No 75
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.28 E-value=2.6e-11 Score=109.46 Aligned_cols=110 Identities=24% Similarity=0.275 Sum_probs=85.5
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
...++..+. ..++.+|||||||+|..+..+++. ..+|+++|+++.+++.+++++.... -++++++.+|+.+
T Consensus 66 ~~~~~~~l~---~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~ 136 (210)
T 3lbf_A 66 VARMTELLE---LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD----LHNVSTRHGDGWQ 136 (210)
T ss_dssp HHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGG
T ss_pred HHHHHHhcC---CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC----CCceEEEECCccc
Confidence 344444443 356779999999999999999998 3799999999999999999987642 2479999999987
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
.... .++||+|+++...+..+ +.+.+.|+|||++++...
T Consensus 137 ~~~~--~~~~D~i~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 137 GWQA--RAPFDAIIVTAAPPEIP----------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp CCGG--GCCEEEEEESSBCSSCC----------THHHHTEEEEEEEEEEEC
T ss_pred CCcc--CCCccEEEEccchhhhh----------HHHHHhcccCcEEEEEEc
Confidence 6543 46899999986543322 257899999999997543
No 76
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.28 E-value=3.4e-11 Score=109.34 Aligned_cols=112 Identities=20% Similarity=0.208 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCC-CCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~-~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
.++.+|||||||+|..+..+++..+..+|++||+|+.+++.+++++...... ...++++++.+|+... .. ..++||+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~-~~~~fD~ 105 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-DK-RFSGYDA 105 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-CG-GGTTCSE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-cc-ccCCCCE
Confidence 4567999999999999999999876679999999999999999987643210 0113899999997432 11 2468999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|++...-...+.. ....+++.+++.|+|||+++..
T Consensus 106 V~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 106 ATVIEVIEHLDEN--RLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EEEESCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEE
T ss_pred EEEHHHHHhCCHH--HHHHHHHHHHHhhCCCEEEEEc
Confidence 9975432221111 1246899999999999987753
No 77
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.28 E-value=2e-11 Score=114.83 Aligned_cols=107 Identities=16% Similarity=0.221 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++..+..+|+++|+++.+++.+++++... .-++++++.+|+.+.. .++++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~~~~~fD~v 109 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN----GIKNVKFLQANIFSLP--FEDSSFDHI 109 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCGGGCC--SCTTCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEcccccCC--CCCCCeeEE
Confidence 5677999999999999999999876689999999999999999988654 2257999999988753 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.......+. ...+++.++++|+|||++++..
T Consensus 110 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 110 FVCFVLEHLQS----PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEechhhhcCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 98654322221 2468999999999999998753
No 78
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.27 E-value=6e-11 Score=108.64 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=76.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHh--hCCCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR--QVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~--~~~~~~fD 236 (387)
++..+|||||||+|..+..+++..+..+|++||+++.+++.+.+.... .+++.++.+|+..... .. .++||
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~-~~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGI-VEKVD 128 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTT-CCCEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhccc-cccee
Confidence 456799999999999999999875456999999999877655543322 1468889999876411 12 36899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+|+++...+. ....+++.+++.|||||.+++.
T Consensus 129 ~V~~~~~~~~------~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 129 LIYQDIAQKN------QIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEeccChh------HHHHHHHHHHHHhCCCCEEEEE
Confidence 9999854321 1234689999999999999875
No 79
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.27 E-value=1.4e-10 Score=106.19 Aligned_cols=116 Identities=22% Similarity=0.168 Sum_probs=86.1
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
+..++..+..+......+|||+|||+|..+..+++. ++..+|+++|+++.+++.++++.... ++++++.+|+.
T Consensus 59 ~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~------~~v~~~~~d~~ 132 (227)
T 1g8a_A 59 GAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER------RNIVPILGDAT 132 (227)
T ss_dssp HHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC------TTEEEEECCTT
T ss_pred HHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc------CCCEEEEccCC
Confidence 344433333333345679999999999999999987 34469999999999999998886532 68999999987
Q ss_pred hHH--hhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 225 EFL--RQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 225 ~~l--~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+.. ... .++||+|++|.+.+. ....+++.+.+.|+|||.+++.
T Consensus 133 ~~~~~~~~-~~~~D~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 133 KPEEYRAL-VPKVDVIFEDVAQPT------QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CGGGGTTT-CCCEEEEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ccchhhcc-cCCceEEEECCCCHh------HHHHHHHHHHHhcCCCCEEEEE
Confidence 632 222 358999998876321 1234699999999999998864
No 80
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.27 E-value=2.2e-11 Score=110.56 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCC-CCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~-~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
.++.+|||||||+|.++..+++..+..+|++||+|+.+++.+++++...... ...++++++.+|+... . ...++||+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~~fD~ 105 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-D-KRFHGYDA 105 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-C-GGGCSCSE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-c-ccCCCcCE
Confidence 3567999999999999999999876679999999999999999987643110 0123899999997432 2 12368999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|++...-...+.. ....+++.+++.|+|||++++.
T Consensus 106 v~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 106 ATVIEVIEHLDLS--RLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp EEEESCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEE
T ss_pred EeeHHHHHcCCHH--HHHHHHHHHHHHcCCCEEEEEc
Confidence 9976543221211 1246899999999999987753
No 81
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.27 E-value=1.5e-11 Score=111.64 Aligned_cols=106 Identities=18% Similarity=0.202 Sum_probs=83.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+.+.+|||||||+|..+..+++..+ +|+++|+|+.+++.+++++... .++++++.+|+.+.. .++++||+|
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~~~D~v 107 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKLS--FEDKTFDYV 107 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSCC--SCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-----CCCceEEECchhcCC--CCCCcEEEE
Confidence 3477999999999999999998864 9999999999999999987653 368999999987642 234689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.......... -...+++.++++|+|||++++..
T Consensus 108 ~~~~~~~~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 108 IFIDSIVHFEPL--ELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp EEESCGGGCCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCchHhCCHH--HHHHHHHHHHHHcCCCcEEEEEe
Confidence 987541122211 12468999999999999998754
No 82
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.27 E-value=7.7e-12 Score=112.52 Aligned_cols=101 Identities=12% Similarity=0.056 Sum_probs=82.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
+..+|||||||+|..+..+++..+..+|+++|+++.+++.+++++.... -++++++.+|+.++. +.++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~---~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK----LENIEPVQSRVEEFP---SEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CSSEEEEECCTTTSC---CCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEecchhhCC---ccCCcCEEE
Confidence 3579999999999999999987666799999999999999999876541 235999999988754 246899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++... . ...+++.+.+.|+|||++++..
T Consensus 138 ~~~~~---~-----~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 138 SRAFA---S-----LNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp CSCSS---S-----HHHHHHHHTTSEEEEEEEEEEE
T ss_pred EeccC---C-----HHHHHHHHHHhcCCCcEEEEEe
Confidence 75431 1 3468999999999999998754
No 83
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.27 E-value=7.1e-11 Score=107.43 Aligned_cols=111 Identities=13% Similarity=0.221 Sum_probs=83.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccC-CCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~-~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
++..+|||||||+|.++..+++.. .+|+++|+++.+++.+++++..... .....+++++.+|+.+.. .++++||+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~ 104 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKG--YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--FHDSSFDF 104 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--SCTTCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--CCCCceeE
Confidence 467799999999999999999883 5999999999999999998765421 111347899999987642 23578999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|++.......+ .......+++.+++.|+|||++++.
T Consensus 105 v~~~~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 105 AVMQAFLTSVP-DPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp EEEESCGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcchhhcCC-CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 99864432221 1111226999999999999999865
No 84
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.27 E-value=8.1e-12 Score=116.46 Aligned_cols=100 Identities=15% Similarity=0.150 Sum_probs=79.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhc----CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH--HhhCCCC
Q 016578 160 SPKTVLVVGGGDGGVLREISRH----DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF--LRQVPRG 233 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~----~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~--l~~~~~~ 233 (387)
++.+|||||||+|..+..+++. .+..+|++||+++.+++.|+. . .++++++.+|+.++ +....+.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~-----~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D-----MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G-----CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c-----CCceEEEECcchhHHHHHhhccC
Confidence 4679999999999999999986 456799999999999988872 1 35899999999875 3322233
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHH-hccCCCeEEecc
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAK-ALRPGGVLCNMA 275 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~-~LkpgGvlv~q~ 275 (387)
+||+|++|.... ....+++.+.+ .|+|||+|++..
T Consensus 152 ~fD~I~~d~~~~-------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHA-------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCS-------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchH-------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 799999987621 23568999997 999999999753
No 85
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.26 E-value=5.9e-11 Score=104.26 Aligned_cols=120 Identities=22% Similarity=0.267 Sum_probs=92.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++++.... . +++++++.+|+.+.+... ++||+|
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~~~~~--~~~D~v 104 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG--L-GDNVTLMEGDAPEALCKI--PDIDIA 104 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT--C-CTTEEEEESCHHHHHTTS--CCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC--C-CcceEEEecCHHHhcccC--CCCCEE
Confidence 466799999999999999999886 799999999999999999876541 1 258999999998865432 489999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH-c
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-F 296 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~-F 296 (387)
+++...+ ....+++.+.+.|+|||.+++...+ ......+.+.+++. |
T Consensus 105 ~~~~~~~-------~~~~~l~~~~~~l~~gG~l~~~~~~----~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 105 VVGGSGG-------ELQEILRIIKDKLKPGGRIIVTAIL----LETKFEAMECLRDLGF 152 (192)
T ss_dssp EESCCTT-------CHHHHHHHHHHTEEEEEEEEEEECB----HHHHHHHHHHHHHTTC
T ss_pred EECCchH-------HHHHHHHHHHHhcCCCcEEEEEecC----cchHHHHHHHHHHCCC
Confidence 9875431 1257999999999999999875432 23345556666654 5
No 86
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.26 E-value=7e-11 Score=106.65 Aligned_cols=146 Identities=14% Similarity=0.082 Sum_probs=98.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+ +++++.+|+.+.. .+++||+|
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~---~~~~fD~v 106 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAG--FDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD---AIDAYDAV 106 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC---CCSCEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcC--CeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC---CCCcEEEE
Confidence 456799999999999999999873 59999999999999999975 3567788877653 35789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccc----------hhhhHHHHHHHHHHHH--cCCCcceEEEE
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMW----------LHTHLIEDMISICRET--FKGSVHYAWAS 306 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~----------~~~~~~~~~~~~l~~~--F~~~v~~~~~~ 306 (387)
++.......+.. ....+++.+++.|+|||++++...... ........+.+.+++. |. .+......
T Consensus 107 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~-~~~~~~~~ 183 (211)
T 3e23_A 107 WAHACLLHVPRD--ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWA-SVAVESSE 183 (211)
T ss_dssp EECSCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCS-EEEEEEEE
T ss_pred EecCchhhcCHH--HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcE-EEEEEecc
Confidence 986543222211 134689999999999999987532111 0111234555566654 66 55555444
Q ss_pred eeccCCC--cEEEEEEec
Q 016578 307 VPTYPSG--IIGFLICST 322 (387)
Q Consensus 307 iPtyp~g--~~gf~~ask 322 (387)
...|... .|-+++..+
T Consensus 184 ~~~~~~~~~~wl~~~~~~ 201 (211)
T 3e23_A 184 GKGFDQELAQFLHVSVRK 201 (211)
T ss_dssp EECTTSCEEEEEEEEEEC
T ss_pred CCCCCCCCceEEEEEEec
Confidence 4445442 355555443
No 87
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.26 E-value=1.9e-11 Score=117.12 Aligned_cols=116 Identities=20% Similarity=0.170 Sum_probs=82.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCC-----------------------------
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG----------------------------- 210 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~----------------------------- 210 (387)
.+++|||||||+|.++..+++..+..+|++||+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999999866679999999999999999987543100
Q ss_pred -----------C--------------CCCCEEEEEcchhhHH---hhCCCCCeeEEEEcCCCCCCCc--cccchHHHHHH
Q 016578 211 -----------F--------------EDPRVRLHIGDAVEFL---RQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDT 260 (387)
Q Consensus 211 -----------~--------------~d~rv~v~~gD~~~~l---~~~~~~~fDvII~D~~dp~~~~--~~L~~~ef~~~ 260 (387)
+ -..+++++.+|..... .....++||+|++.....+... ..-....+++.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0 0148999999986322 1223578999998654211000 00023568999
Q ss_pred HHHhccCCCeEEecc
Q 016578 261 IAKALRPGGVLCNMA 275 (387)
Q Consensus 261 l~~~LkpgGvlv~q~ 275 (387)
++++|+|||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999753
No 88
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.26 E-value=2.4e-11 Score=115.12 Aligned_cols=108 Identities=21% Similarity=0.320 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.. .+|++||+++.+++.+++.+.... + .++++++.+|+.+.... .+++||+|
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~-~~~~fD~v 140 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERG--HQVILCDLSAQMIDRAKQAAEAKG--V-SDNMQFIHCAAQDVASH-LETPVDLI 140 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC-C--C-GGGEEEEESCGGGTGGG-CSSCEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcC--C-CcceEEEEcCHHHhhhh-cCCCceEE
Confidence 346799999999999999999883 599999999999999999876541 1 25899999999886532 35789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
++.......+. ...+++.++++|+|||++++...
T Consensus 141 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 141 LFHAVLEWVAD----PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhcccC----HHHHHHHHHHHcCCCeEEEEEEe
Confidence 98654322221 25699999999999999987543
No 89
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.26 E-value=2.5e-11 Score=114.55 Aligned_cols=110 Identities=15% Similarity=0.018 Sum_probs=80.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccc-------c-CCC-----CCCCEEEEEcchhh
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPEL-------A-VGF-----EDPRVRLHIGDAVE 225 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~-------~-~~~-----~d~rv~v~~gD~~~ 225 (387)
..+.+|||+|||+|..+..+++.+ .+|++||+++.+++.|++..... . .++ ..++++++++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRG--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTT--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCC--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 356799999999999999999884 48999999999999998765310 0 000 13689999999987
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
..... .++||+|+.......-+.. ....+++.+.++|+|||++++
T Consensus 145 l~~~~-~~~FD~V~~~~~l~~l~~~--~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 145 LPRAN-IGKFDRIWDRGALVAINPG--DHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp GGGGC-CCCEEEEEESSSTTTSCGG--GHHHHHHHHHHTEEEEEEEEE
T ss_pred CCccc-CCCEEEEEEhhhhhhCCHH--HHHHHHHHHHHHcCCCeEEEE
Confidence 64321 2689999975443222211 135689999999999999853
No 90
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=4.9e-11 Score=113.46 Aligned_cols=123 Identities=12% Similarity=0.057 Sum_probs=93.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+.++|||+|||+|.++..+++..+..+|++||+++.+++.|++++.... + ++++++.+|+.++ .. .++||+|
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~--l--~~~~~~~~d~~~~-~~--~~~~D~V 190 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK--L--NNVIPILADNRDV-EL--KDVADRV 190 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT--C--SSEEEEESCGGGC-CC--TTCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC--C--CCEEEEECChHHc-Cc--cCCceEE
Confidence 56679999999999999999998555699999999999999999986542 2 4689999999987 43 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccch-hhhHHHHHHHHHHHHc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL-HTHLIEDMISICRETF 296 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~-~~~~~~~~~~~l~~~F 296 (387)
++|.+. . ..++++.+.+.|+|||++++....... ......+..+.+.+.+
T Consensus 191 i~d~p~--~------~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~ 241 (272)
T 3a27_A 191 IMGYVH--K------THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKN 241 (272)
T ss_dssp EECCCS--S------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHT
T ss_pred EECCcc--c------HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHh
Confidence 998763 1 234788999999999999864422211 1134455566666654
No 91
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.25 E-value=1.3e-11 Score=114.05 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=82.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
++.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++++.... ..+++++.+|+.++. .++++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~--~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG----KRVRNYFCCGLQDFT--PEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG----GGEEEEEECCGGGCC--CCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC----CceEEEEEcChhhcC--CCCCCEEEEE
Confidence 57799999999999999998875 4699999999999999999986541 247899999977653 2345899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++......+... ...+++.++++|+|||++++.
T Consensus 152 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 152 IQWVIGHLTDQH--LAEFLRRCKGSLRPNGIIVIK 184 (241)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEE
T ss_pred EcchhhhCCHHH--HHHHHHHHHHhcCCCeEEEEE
Confidence 875432222111 236899999999999999874
No 92
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.25 E-value=2.4e-11 Score=118.55 Aligned_cols=123 Identities=20% Similarity=0.216 Sum_probs=88.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhccccc-----CCC--CCCCEEEEEcchhhHHhhC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELA-----VGF--EDPRVRLHIGDAVEFLRQV 230 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~-----~~~--~d~rv~v~~gD~~~~l~~~ 230 (387)
.+..+|||||||+|.++..+++. .+..+|+++|+++.+++.|++++.... ..+ ...+++++.+|+.+.+...
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 45679999999999999999987 455799999999999999999876431 011 1258999999998764333
Q ss_pred CCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHH
Q 016578 231 PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 294 (387)
Q Consensus 231 ~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~ 294 (387)
++++||+|++|..++.. +++.+.++|+|||++++...+ ......+.+.+++
T Consensus 184 ~~~~fD~V~~~~~~~~~---------~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~ 234 (336)
T 2b25_A 184 KSLTFDAVALDMLNPHV---------TLPVFYPHLKHGGVCAVYVVN----ITQVIELLDGIRT 234 (336)
T ss_dssp ----EEEEEECSSSTTT---------THHHHGGGEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred CCCCeeEEEECCCCHHH---------HHHHHHHhcCCCcEEEEEeCC----HHHHHHHHHHHHh
Confidence 34579999998765432 688999999999999975432 2234455555554
No 93
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.25 E-value=1.8e-11 Score=110.97 Aligned_cols=115 Identities=16% Similarity=0.187 Sum_probs=88.8
Q ss_pred HHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 147 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 147 ~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
.+++..+.. .++.+|||||||+|..+..+++.. +..+|+++|+++.+++.+++.+.... .++++++.+|+.+
T Consensus 27 ~~~~~~~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~ 99 (219)
T 3dh0_A 27 EKVLKEFGL---KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG----LKNVEVLKSEENK 99 (219)
T ss_dssp HHHHHHHTC---CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECBTTB
T ss_pred HHHHHHhCC---CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeccccc
Confidence 445555432 456799999999999999999874 55699999999999999999986552 2479999999876
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
.. .++++||+|++.......+ ....+++.+.+.|+|||++++.
T Consensus 100 ~~--~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 100 IP--LPDNTVDFIFMAFTFHELS----EPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp CS--SCSSCEEEEEEESCGGGCS----SHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC--CCCCCeeEEEeehhhhhcC----CHHHHHHHHHHHhCCCeEEEEE
Confidence 42 2356899999865432221 1356999999999999998874
No 94
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.24 E-value=2.7e-11 Score=112.40 Aligned_cols=105 Identities=20% Similarity=0.248 Sum_probs=82.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
++..+|||||||+|.++..+++.. ..+|+++|+++.+++.+++++... ++ .++++++.+|+.+... +++||+|
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~---~~~fD~V 107 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEEL--GV-SERVHFIHNDAAGYVA---NEKCDVA 107 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCCTTCCC---SSCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc--CC-CcceEEEECChHhCCc---CCCCCEE
Confidence 556799999999999999999875 358999999999999999987654 22 3589999999877532 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++.......+ -...+++.++++|+|||.+++.
T Consensus 108 ~~~~~~~~~~----~~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 108 ACVGATWIAG----GFAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp EEESCGGGTS----SSHHHHHHHTTSEEEEEEEEEE
T ss_pred EECCChHhcC----CHHHHHHHHHHHcCCCeEEEEe
Confidence 9743321111 1356899999999999998874
No 95
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.24 E-value=2.3e-11 Score=109.50 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++++.... . .+++++.+|+.++. +++||+|
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~--~~v~~~~~d~~~~~----~~~fD~i 129 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALNG--I--YDIALQKTSLLADV----DGKFDLI 129 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT--C--CCCEEEESSTTTTC----CSCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC--C--CceEEEeccccccC----CCCceEE
Confidence 456799999999999999998874 5699999999999999999987542 1 23999999987653 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+++... .. ...+++.+.+.|+|||++++.
T Consensus 130 ~~~~~~-----~~--~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 130 VANILA-----EI--LLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp EEESCH-----HH--HHHHGGGSGGGEEEEEEEEEE
T ss_pred EECCcH-----HH--HHHHHHHHHHhcCCCCEEEEE
Confidence 987532 11 256889999999999999874
No 96
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=2.3e-10 Score=99.88 Aligned_cols=124 Identities=15% Similarity=0.212 Sum_probs=92.7
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
...++..+.. .++.+|||||||+|.++..+++ +..+|+++|+++.+++.+++++... + -++++++.+|+.+
T Consensus 24 ~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~--~--~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 24 RAVSIGKLNL---NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKF--N--IKNCQIIKGRAED 94 (183)
T ss_dssp HHHHHHHHCC---CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHT--T--CCSEEEEESCHHH
T ss_pred HHHHHHHcCC---CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHc--C--CCcEEEEECCccc
Confidence 3445554432 4567999999999999999998 4579999999999999999998654 1 2579999999988
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 295 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~ 295 (387)
.+. +++||+|+++.. ....++++.+++. |||.+++...+ ......+.+.+++.
T Consensus 95 ~~~---~~~~D~i~~~~~--------~~~~~~l~~~~~~--~gG~l~~~~~~----~~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 95 VLD---KLEFNKAFIGGT--------KNIEKIIEILDKK--KINHIVANTIV----LENAAKIINEFESR 147 (183)
T ss_dssp HGG---GCCCSEEEECSC--------SCHHHHHHHHHHT--TCCEEEEEESC----HHHHHHHHHHHHHT
T ss_pred ccc---CCCCcEEEECCc--------ccHHHHHHHHhhC--CCCEEEEEecc----cccHHHHHHHHHHc
Confidence 543 358999998765 1135688888888 99999875422 23345566666655
No 97
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.24 E-value=2.6e-11 Score=112.65 Aligned_cols=107 Identities=17% Similarity=0.216 Sum_probs=84.2
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 158 IPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
..++.+|||||||+|..+..+++.. ..+|++||+++.+++.+++.+... ++++++.+|+.+. ..++++||+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~--~~~~~~fD~ 123 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN------NKIIFEANDILTK--EFPENNFDL 123 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC------TTEEEEECCTTTC--CCCTTCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC------CCeEEEECccccC--CCCCCcEEE
Confidence 3456799999999999999999874 369999999999999999987532 6899999998764 233578999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|++.......+.. ....+++.++++|+|||++++..
T Consensus 124 v~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 124 IYSRDAILALSLE--NKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeHHHHHHhcChH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 9986443222111 13568999999999999998754
No 98
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.24 E-value=3e-11 Score=109.49 Aligned_cols=112 Identities=18% Similarity=0.232 Sum_probs=86.5
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
|.+++..+.. .++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.++ .+++++.+|+.+
T Consensus 34 ~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~ 100 (220)
T 3hnr_A 34 YEDILEDVVN---KSFGNVLEFGVGTGNLTNKLLLAG--RTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLS 100 (220)
T ss_dssp HHHHHHHHHH---TCCSEEEEECCTTSHHHHHHHHTT--CEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSS
T ss_pred HHHHHHHhhc---cCCCeEEEeCCCCCHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhh
Confidence 5666666543 356799999999999999999873 599999999999999999874 478899999877
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+. .+ ++||+|++.......+.. ....+++.+++.|+|||++++..
T Consensus 101 ~~--~~-~~fD~v~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 101 FE--VP-TSIDTIVSTYAFHHLTDD--EKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp CC--CC-SCCSEEEEESCGGGSCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC--CC-CCeEEEEECcchhcCChH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 52 22 689999987543222211 12348999999999999998753
No 99
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.24 E-value=6e-11 Score=111.18 Aligned_cols=107 Identities=21% Similarity=0.260 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..+.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+... ++ .++++++.+|+.+.. .++++||+|
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~--~~~~~fD~v 133 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAA--GL-ANRVTFSYADAMDLP--FEDASFDAV 133 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC--SCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhc--CC-CcceEEEECccccCC--CCCCCccEE
Confidence 456799999999999999999865 369999999999999999987654 12 348999999987641 235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.......+. ...+++.+++.|+|||++++..
T Consensus 134 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 134 WALESLHHMPD----RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEESCTTTSSC----HHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEechhhhCCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 97544322221 2578999999999999988754
No 100
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.24 E-value=3.8e-11 Score=106.60 Aligned_cols=104 Identities=15% Similarity=0.156 Sum_probs=81.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... ..++++++.+|+.+.. . +++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~-~~~~D~v 101 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANG--YDVDAWDKNAMSIANVERIKSIE----NLDNLHTRVVDLNNLT--F-DRQYDFI 101 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEECCGGGCC--C-CCCEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhC----CCCCcEEEEcchhhCC--C-CCCceEE
Confidence 456799999999999999999883 59999999999999999987654 1247999999987752 2 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
++.......+.. ....+++.+.+.|+|||.+++
T Consensus 102 ~~~~~l~~~~~~--~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 102 LSTVVLMFLEAK--TIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp EEESCGGGSCGG--GHHHHHHHHHHTEEEEEEEEE
T ss_pred EEcchhhhCCHH--HHHHHHHHHHHhcCCCeEEEE
Confidence 987543222211 235689999999999998764
No 101
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.23 E-value=4.8e-11 Score=113.46 Aligned_cols=108 Identities=16% Similarity=0.174 Sum_probs=86.1
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 158 IPSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
..++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.+++.+... .++++++++|+.++. . +++||
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~--~-~~~fD 91 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-----PYDSEFLEGDATEIE--L-NDKYD 91 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-----SSEEEEEESCTTTCC--C-SSCEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcchhhcC--c-CCCee
Confidence 35678999999999999999998754 479999999999999999987654 348999999998753 2 45899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
+|++.......+. ...+++.+++.|+|||.+++...+
T Consensus 92 ~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAFLLHMTT----PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCGGGCSS----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECChhhcCCC----HHHHHHHHHHHcCCCCEEEEEecc
Confidence 9998764322221 247999999999999999865433
No 102
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.23 E-value=6.1e-11 Score=112.27 Aligned_cols=105 Identities=16% Similarity=0.118 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
++..+|||||||+|..+..+++..+ .+|+++|+++.+++.+++.+.... + .++++++.+|+.++ + ++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~----~-~~fD~v 133 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSE--N-LRSKRVLLAGWEQF----D-EPVDRI 133 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCC--C-CSCEEEEESCGGGC----C-CCCSEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcC--C-CCCeEEEECChhhC----C-CCeeEE
Confidence 4567999999999999999995433 499999999999999999876431 1 35899999998653 2 689999
Q ss_pred EEcCCC-CCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSD-PVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~d-p~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++...- ...+. ....+++.++++|+|||+++++.
T Consensus 134 ~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 134 VSIGAFEHFGHE---RYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEESCGGGTCTT---THHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeCchhhcChH---HHHHHHHHHHHhcCCCCEEEEEE
Confidence 975432 22111 13568999999999999998764
No 103
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.23 E-value=3.5e-11 Score=115.03 Aligned_cols=108 Identities=17% Similarity=0.105 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC----CCC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV----PRG 233 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~----~~~ 233 (387)
.++.+|||||||+|..+..+++.. +..+|++||+++.+++.|++++.... ...++++++.+|+.++.... ..+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP--DTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc--CCCCceEEEEcCHHhCCccccccccCC
Confidence 467799999999999999999753 56899999999999999999876430 02468999999998753211 126
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
+||+|++....... -...+++.++++|+|||+|++
T Consensus 113 ~fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEE
Confidence 89999987543222 245799999999999999986
No 104
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.23 E-value=3.1e-11 Score=120.65 Aligned_cols=122 Identities=23% Similarity=0.287 Sum_probs=92.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
.+.+|||||||+|.++..+++.. .+|++||+|+.+++.|++++... ..+++++.+|+.+.... +++||+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g--~~V~gvDis~~al~~A~~n~~~~-----~~~v~~~~~D~~~~~~~--~~~fD~Ii 303 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEAN-----ALKAQALHSDVDEALTE--EARFDIIV 303 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT--CEEEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTSCT--TCCEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc-----CCCeEEEEcchhhcccc--CCCeEEEE
Confidence 56799999999999999999984 59999999999999999998764 23589999999886532 46899999
Q ss_pred EcCCCCCCCc-cccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcC
Q 016578 240 VDSSDPVGPA-QELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFK 297 (387)
Q Consensus 240 ~D~~dp~~~~-~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~ 297 (387)
++.+...+.. ..-....+++.+++.|+|||++++...... .....+++.|.
T Consensus 304 ~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l-------~~~~~l~~~f~ 355 (381)
T 3dmg_A 304 TNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL-------KYEPLLEEKFG 355 (381)
T ss_dssp ECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS-------CHHHHHHHHHS
T ss_pred ECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC-------ChHHHHHHhhc
Confidence 9876554321 111235799999999999999987543322 12344566677
No 105
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.23 E-value=2.9e-11 Score=110.72 Aligned_cols=101 Identities=17% Similarity=0.166 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++.. .+|+++|+++.+++.|++.++ . +++++.+|+.+.. ++++||+|
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-------~-~v~~~~~d~~~~~---~~~~fD~v 107 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK-------D-GITYIHSRFEDAQ---LPRRYDNI 107 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC-------S-CEEEEESCGGGCC---CSSCEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh-------C-CeEEEEccHHHcC---cCCcccEE
Confidence 356789999999999999999875 389999999999999999874 2 7999999988762 35689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHH-HhccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIA-KALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~-~~LkpgGvlv~q~~ 276 (387)
++...-...+. ...+++.++ ++|+|||++++...
T Consensus 108 ~~~~~l~~~~~----~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 108 VLTHVLEHIDD----PVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EEESCGGGCSS----HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEhhHHHhhcC----HHHHHHHHHHHhcCCCCEEEEEcC
Confidence 97654322111 246999999 99999999987653
No 106
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.22 E-value=8.7e-11 Score=117.87 Aligned_cols=121 Identities=20% Similarity=0.214 Sum_probs=89.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
+.++|||+|||+|+.+..+++.. .+|++||+|+.+++.+++++.... ++ .++..+|+++++.... +.||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng--~~---~~~~~~D~~~~l~~~~-~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLG--LR---VDIRHGEALPTLRGLE-GPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHT--CC---CEEEESCHHHHHHTCC-CCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhC--CC---CcEEEccHHHHHHHhc-CCCCEEE
Confidence 47799999999999999999874 349999999999999999987652 22 3567999999987653 3499999
Q ss_pred EcCCCCCCCcccc-----chHHHHHHHHHhccCCCeEEecccccchhhhHHHHH
Q 016578 240 VDSSDPVGPAQEL-----VEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 288 (387)
Q Consensus 240 ~D~~dp~~~~~~L-----~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~ 288 (387)
+|++.-......+ ...++++.+.+.|+|||++++.+.+.....+.+..+
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~ 339 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEV 339 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHH
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHH
Confidence 9976411111111 124688899999999999986665555444444433
No 107
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.22 E-value=1.1e-10 Score=111.85 Aligned_cols=145 Identities=13% Similarity=0.090 Sum_probs=100.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+.++|||+|||+|.++..+++++ ..+|+++|+||..++.+++++..+ ++ ..+++++.+|++++.. ++.||.|
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N--~v-~~~v~~~~~D~~~~~~---~~~~D~V 196 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLN--KV-EDRMSAYNMDNRDFPG---ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHT--TC-TTTEEEECSCTTTCCC---CSCEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEeCcHHHhcc---ccCCCEE
Confidence 567899999999999999999985 468999999999999999998765 23 3489999999998863 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc--cchhhhHHHHHHHHHHHHcCCCcc-eEEEEeeccCCCcE
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES--MWLHTHLIEDMISICRETFKGSVH-YAWASVPTYPSGII 315 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s--~~~~~~~~~~~~~~l~~~F~~~v~-~~~~~iPtyp~g~~ 315 (387)
|++.+. ...+|+..+.++|++||++.+.... ..........+.+.+++... .+. .....|-+|..+.|
T Consensus 197 i~~~p~--------~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~-~v~~~~~~~Vk~yaP~~~ 267 (278)
T 3k6r_A 197 LMGYVV--------RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGY-DVEKLNELKIKRYAPGVW 267 (278)
T ss_dssp EECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC-EEEEEEEEEEEEETTTEE
T ss_pred EECCCC--------cHHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCC-cEEEEEEEEEEeECcCcc
Confidence 988642 1235888899999999998643211 11111222333333333322 222 22234667755666
Q ss_pred EEEE
Q 016578 316 GFLI 319 (387)
Q Consensus 316 gf~~ 319 (387)
-+++
T Consensus 268 hvv~ 271 (278)
T 3k6r_A 268 HVVL 271 (278)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 108
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.22 E-value=3.1e-11 Score=112.01 Aligned_cols=111 Identities=17% Similarity=0.281 Sum_probs=86.9
Q ss_pred HHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH
Q 016578 147 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 226 (387)
Q Consensus 147 ~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~ 226 (387)
.+++..++ ...+.+|||||||+|..+..+++..+..+|+++|+++.+++.+++.. ++++++.+|+.++
T Consensus 23 ~~l~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~ 90 (259)
T 2p35_A 23 RDLLAQVP---LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATW 90 (259)
T ss_dssp HHHHTTCC---CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTC
T ss_pred HHHHHhcC---CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhc
Confidence 45555443 24567999999999999999998755679999999999999999873 4789999998775
Q ss_pred HhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 227 LRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 227 l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
. ++++||+|++.......+ -...+++.+++.|+|||.+++...
T Consensus 91 ~---~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 91 K---PAQKADLLYANAVFQWVP----DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp C---CSSCEEEEEEESCGGGST----THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred C---ccCCcCEEEEeCchhhCC----CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 3 356899999865433222 134689999999999999987653
No 109
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.22 E-value=1e-10 Score=107.85 Aligned_cols=104 Identities=16% Similarity=0.171 Sum_probs=82.1
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHh--hCCCCCe
Q 016578 158 IPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR--QVPRGKY 235 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~--~~~~~~f 235 (387)
..+..+|||||||+|.++..+++..+..+|++||+++.+++.++++... .++++++.+|+.+... .. .++|
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~-~~~~ 144 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANI-VEKV 144 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTT-SCCE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCccccccc-CccE
Confidence 3456799999999999999999885457999999999999999998653 2689999999876221 12 2589
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|+|+.+..++. ....+++.+.+.|+|||++++.
T Consensus 145 D~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDVAQPN------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEecCChh------HHHHHHHHHHHhCCCCcEEEEE
Confidence 99997754321 1245799999999999998873
No 110
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.22 E-value=6.9e-11 Score=113.32 Aligned_cols=108 Identities=17% Similarity=0.304 Sum_probs=84.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCe---e
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY---D 236 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~f---D 236 (387)
.+.+|||||||+|.++..+++. +..+|++||+|+.+++.|++++... ++ +.+++++.+|+.+.+. ++| |
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~--~l-~~~v~~~~~D~~~~~~----~~f~~~D 194 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERH--GV-SDRFFVRKGEFLEPFK----EKFASIE 194 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHT--TC-TTSEEEEESSTTGGGG----GGTTTCC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc--CC-CCceEEEECcchhhcc----cccCCCC
Confidence 4569999999999999999998 6789999999999999999998655 22 2379999999988653 368 9
Q ss_pred EEEEcCCCCC-----------CCccccc----hHHHHHHHH-HhccCCCeEEecc
Q 016578 237 AIIVDSSDPV-----------GPAQELV----EKPFFDTIA-KALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~-----------~~~~~L~----~~ef~~~l~-~~LkpgGvlv~q~ 275 (387)
+|+++++... .|...|+ ..++|+.+. +.|+|||++++..
T Consensus 195 ~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 195 MILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp EEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred EEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 9999865311 0100011 126899999 9999999999754
No 111
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.21 E-value=8.2e-11 Score=110.64 Aligned_cols=134 Identities=17% Similarity=0.159 Sum_probs=95.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||+|||+|.++..+++... +|+++|+|+.+++.+++++.... . .++++.+|+.+.+. +++||+|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~--~---~v~~~~~d~~~~~~---~~~fD~V 188 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNG--V---RPRFLEGSLEAALP---FGPFDLL 188 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTT--C---CCEEEESCHHHHGG---GCCEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcC--C---cEEEEECChhhcCc---CCCCCEE
Confidence 4567999999999999999998753 99999999999999999886541 1 28999999988643 3589999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH-cCCCcceEEEEeeccCCCcEEE
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIGF 317 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~iPtyp~g~~gf 317 (387)
+++... .. ...+++.+.+.|+|||++++.... ......+.+.+++. |. .+ .+- ..+.|..
T Consensus 189 v~n~~~-----~~--~~~~l~~~~~~LkpgG~lils~~~----~~~~~~v~~~l~~~Gf~-~~-----~~~--~~~~W~~ 249 (254)
T 2nxc_A 189 VANLYA-----EL--HAALAPRYREALVPGGRALLTGIL----KDRAPLVREAMAGAGFR-PL-----EEA--AEGEWVL 249 (254)
T ss_dssp EEECCH-----HH--HHHHHHHHHHHEEEEEEEEEEEEE----GGGHHHHHHHHHHTTCE-EE-----EEE--EETTEEE
T ss_pred EECCcH-----HH--HHHHHHHHHHHcCCCCEEEEEeec----cCCHHHHHHHHHHCCCE-EE-----EEe--ccCCeEE
Confidence 987532 11 346899999999999999874311 12234555555554 43 21 221 1356766
Q ss_pred EEEe
Q 016578 318 LICS 321 (387)
Q Consensus 318 ~~as 321 (387)
+++.
T Consensus 250 l~~~ 253 (254)
T 2nxc_A 250 LAYG 253 (254)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 112
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.21 E-value=4.9e-11 Score=106.87 Aligned_cols=100 Identities=16% Similarity=0.169 Sum_probs=80.3
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+ ++++++.+|+.++- .++++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG--HQIEGLEPATRLVELARQTH---------PSVTFHHGTITDLS--DSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT--CCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGGG--GSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC---------CCCeEEeCcccccc--cCCCCeEEEEe
Confidence 6799999999999999999884 48999999999999999974 37899999988753 23578999998
Q ss_pred cCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 241 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 241 D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.......+.. ....+++.++++|+|||++++..
T Consensus 109 ~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 109 WYSLIHMGPG--ELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp ESSSTTCCTT--THHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhHhcCCHH--HHHHHHHHHHHHcCCCcEEEEEE
Confidence 6543222211 13569999999999999998654
No 113
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.21 E-value=2.9e-11 Score=111.14 Aligned_cols=104 Identities=13% Similarity=0.175 Sum_probs=81.4
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
+.+|||||||+|..+..+++. ..+|+++|+++.+++.++++++... ...+++++.+|+.++. ++++||+|++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~fD~v~~ 138 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSP---KAEYFSFVKEDVFTWR---PTELFDLIFD 138 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSG---GGGGEEEECCCTTTCC---CSSCEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccC---CCcceEEEECchhcCC---CCCCeeEEEE
Confidence 459999999999999999874 3689999999999999999876421 1357999999988753 2458999997
Q ss_pred cCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 241 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 241 D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
.......+.. ....+++.++++|+|||.+++.
T Consensus 139 ~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~ 170 (235)
T 3lcc_A 139 YVFFCAIEPE--MRPAWAKSMYELLKPDGELITL 170 (235)
T ss_dssp ESSTTTSCGG--GHHHHHHHHHHHEEEEEEEEEE
T ss_pred ChhhhcCCHH--HHHHHHHHHHHHCCCCcEEEEE
Confidence 6543322211 2456899999999999998864
No 114
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.21 E-value=5.6e-11 Score=109.90 Aligned_cols=104 Identities=18% Similarity=0.224 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
++..+|||||||+|..+..+++.. .+|+++|+++.+++.+++++.... -++++++.+|+.+.. .++++||+|
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~--~~~~~fD~v 91 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG----VENVRFQQGTAESLP--FPDDSFDII 91 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT----CCSEEEEECBTTBCC--SCTTCEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEecccccCC--CCCCcEEEE
Confidence 567799999999999999999875 499999999999999999876541 247999999987642 235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++.......+. ...+++.++++|+|||++++.
T Consensus 92 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 92 TCRYAAHHFSD----VRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhccC----HHHHHHHHHHHcCCCcEEEEE
Confidence 98744322111 346899999999999998864
No 115
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.21 E-value=1.7e-11 Score=109.99 Aligned_cols=108 Identities=16% Similarity=0.326 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+.+.+|||||||+|.++..+++... .+|+++|+++.+++.+++++.. .++++++.+|+.+. ..++++||+|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~--~~~~~~fD~v 111 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL--DFPSASFDVV 111 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC--CSCSSCEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC--CCCCCcccEE
Confidence 5567999999999999999998853 4899999999999999998753 36899999998764 2335689999
Q ss_pred EEcCCC---------CCCCcc--ccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSD---------PVGPAQ--ELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~d---------p~~~~~--~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.... ++.... .-....+++.+.++|+|||++++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 975321 111100 0112578999999999999998754
No 116
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.21 E-value=1.3e-10 Score=101.27 Aligned_cols=96 Identities=14% Similarity=0.159 Sum_probs=77.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+..+|||||||+|..+..+++.. .+|+++|+++.+++.+++.. ++++++.+| . ..++++||+|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~v~~~~~d-~----~~~~~~~D~v 79 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKF---------DSVITLSDP-K----EIPDNSVDFI 79 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHC---------TTSEEESSG-G----GSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhC---------CCcEEEeCC-C----CCCCCceEEE
Confidence 456699999999999999999886 49999999999999999982 478999999 2 2235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++.......+ -...+++.+++.|+|||++++.
T Consensus 80 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 80 LFANSFHDMD----DKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp EEESCSTTCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEccchhccc----CHHHHHHHHHHhcCCCCEEEEE
Confidence 9765443222 1357899999999999998864
No 117
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.21 E-value=6.6e-11 Score=109.84 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++.. ..++++++.+|+.+.. .++++||+|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~~--~~~~~fD~v 108 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKIAG-----VDRKVQVVQADARAIP--LPDESVHGV 108 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHTTT-----SCTTEEEEESCTTSCC--SCTTCEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhhc-----cCCceEEEEcccccCC--CCCCCeeEE
Confidence 456799999999999999999873 6899999999999999998722 2468999999987642 235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++.......+ -...+++.++++|+|||++++.
T Consensus 109 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVP----DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcC----CHHHHHHHHHHHCCCCcEEEEE
Confidence 9865432222 1356899999999999998875
No 118
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.20 E-value=1.9e-11 Score=117.39 Aligned_cols=110 Identities=19% Similarity=0.189 Sum_probs=83.1
Q ss_pred CCCCEEEEEcCcccHHHHHHH-hcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREIS-RHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~-k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
+++.+|||||||+|..+..++ +..+..+|+++|+++.+++.+++++.... . ..+++++.+|+.+.. . +++||+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~--~-~~~fD~ 190 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA--L-AGQITLHRQDAWKLD--T-REGYDL 190 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST--T-GGGEEEEECCGGGCC--C-CSCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC--C-CCceEEEECchhcCC--c-cCCeEE
Confidence 567899999999999999985 34456799999999999999999986542 1 347999999988752 2 378999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|++.......+ .......+++.+++.|+|||++++..
T Consensus 191 v~~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 191 LTSNGLNIYEP-DDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EECCSSGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECChhhhcC-CHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 99754322111 11112348999999999999998654
No 119
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.20 E-value=7.9e-11 Score=108.10 Aligned_cols=102 Identities=22% Similarity=0.248 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++... .++++++.+|+.+.. .++++||+|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v 120 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTG--YKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSLP--FENEQFEAI 120 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBCS--SCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcCC--CCCCCccEE
Confidence 466799999999999999999984 589999999999999999752 468999999987642 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.......+. ...+++.+++.|+|||++++..
T Consensus 121 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 121 MAINSLEWTEE----PLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EEESCTTSSSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcChHhhccC----HHHHHHHHHHHhCCCeEEEEEE
Confidence 97654332221 2468999999999999988754
No 120
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.20 E-value=8.4e-11 Score=107.82 Aligned_cols=105 Identities=16% Similarity=0.206 Sum_probs=82.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+.. .+++++.+|+.+.. .++++||+|
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~d~~~~~--~~~~~fD~v 111 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPD-------TGITYERADLDKLH--LPQDSFDLA 111 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCS-------SSEEEEECCGGGCC--CCTTCEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhccc-------CCceEEEcChhhcc--CCCCCceEE
Confidence 356799999999999999999884 34999999999999999998752 47999999987742 235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
++.......+ -...+++.++++|+|||++++...+
T Consensus 112 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 112 YSSLALHYVE----DVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEeccccccc----hHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 9765422211 1356899999999999999875533
No 121
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.20 E-value=6.9e-11 Score=109.05 Aligned_cols=102 Identities=21% Similarity=0.295 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
....+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++... ++ +++++++.+|+.+... +++.||+|
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~--~~~~~D~v 162 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKF--NL-GKNVKFFNVDFKDAEV--PEGIFHAA 162 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHT--TC-CTTEEEECSCTTTSCC--CTTCBSEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc--CC-CCcEEEEEcChhhccc--CCCcccEE
Confidence 45679999999999999999988 479999999999999999987654 22 3589999999877531 24579999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+++..++ ..+++.+.+.|+|||.+++...
T Consensus 163 ~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 163 FVDVREP---------WHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp EECSSCG---------GGGHHHHHHHBCTTCEEEEEES
T ss_pred EECCcCH---------HHHHHHHHHHcCCCCEEEEEeC
Confidence 9876532 2478999999999999987543
No 122
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.20 E-value=2e-10 Score=103.73 Aligned_cols=101 Identities=19% Similarity=0.250 Sum_probs=79.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh--CCCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ--VPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~--~~~~~fD 236 (387)
..+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++. .+++++.+|..+.... ..+++||
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRG--IEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCC--CEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCcc
Confidence 456899999999999999999883 5899999999999999987 2567888998876322 2244699
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+|++..... .. -...+++.+++.|+|||++++...
T Consensus 119 ~v~~~~~l~-~~----~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 119 LICANFALL-HQ----DIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEESCCC-SS----CCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEECchhh-hh----hHHHHHHHHHHHhCCCeEEEEEec
Confidence 999875543 11 134699999999999999997654
No 123
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.20 E-value=5.4e-11 Score=110.00 Aligned_cols=106 Identities=18% Similarity=0.256 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..+.+|||||||+|.++..+++.. ..+|+++|+++.+++.+++++... ++++++.+|+.+.. .++++||+|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~--~~~~~fD~v 162 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM------PVGKFILASMETAT--LPPNTYDLI 162 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS------SEEEEEESCGGGCC--CCSSCEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC------CceEEEEccHHHCC--CCCCCeEEE
Confidence 457799999999999999998875 468999999999999999987532 58999999987642 235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.......+.. ....+++.++++|+|||++++..
T Consensus 163 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 163 VIQWTAIYLTDA--DFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhhCCHH--HHHHHHHHHHHhcCCCeEEEEEe
Confidence 976542221111 13568999999999999988643
No 124
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.20 E-value=8.5e-11 Score=111.33 Aligned_cols=117 Identities=19% Similarity=0.320 Sum_probs=90.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
.+..+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... ++ .++++++.+|+.+.+ ++++||+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~---~~~~~D~ 184 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW--GL-IERVTIKVRDISEGF---DEKDVDA 184 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT--TC-GGGEEEECCCGGGCC---SCCSEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc--CC-CCCEEEEECCHHHcc---cCCccCE
Confidence 45679999999999999999987 55679999999999999999987654 11 247999999988763 2458999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHH
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 294 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~ 294 (387)
|++|.+++ .++++.+.+.|+|||++++...+. ....++.+.+++
T Consensus 185 V~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~~----~~~~~~~~~l~~ 228 (277)
T 1o54_A 185 LFLDVPDP---------WNYIDKCWEALKGGGRFATVCPTT----NQVQETLKKLQE 228 (277)
T ss_dssp EEECCSCG---------GGTHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHH
T ss_pred EEECCcCH---------HHHHHHHHHHcCCCCEEEEEeCCH----HHHHHHHHHHHH
Confidence 99986543 247899999999999998754321 223445555554
No 125
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.20 E-value=8.4e-11 Score=105.88 Aligned_cols=103 Identities=18% Similarity=0.260 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+...+|||||||+|.++..+++.. .+|+++|+++.+++.+++. ..++++++.+|+.++ .++++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~~d~~~~---~~~~~~D~v 111 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLA--DRVTALDGSAEMIAEAGRH--------GLDNVEFRQQDLFDW---TPDRQWDAV 111 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHGGG--------CCTTEEEEECCTTSC---CCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHhc--------CCCCeEEEecccccC---CCCCceeEE
Confidence 455699999999999999999883 5999999999999999982 125899999999876 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
++...-...+.. ....+++.+++.|+|||++++...
T Consensus 112 ~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 112 FFAHWLAHVPDD--RFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEechhhcCCHH--HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 986543222211 125689999999999999987543
No 126
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.20 E-value=9.9e-11 Score=117.09 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=91.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC--CCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~--~~~~fD 236 (387)
...++|||+|||+|+++..+++.. ..+|++||+|+.+++.|++++... ++.+++++++.+|+.+++... ..++||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~n--gl~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELN--KLDLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHhcCCCCC
Confidence 356799999999999999999874 569999999999999999998654 221128999999999987542 135899
Q ss_pred EEEEcCCCCCCCccc-----cchHHHHHHHHHhccCCCeEEecccccchhhh
Q 016578 237 AIIVDSSDPVGPAQE-----LVEKPFFDTIAKALRPGGVLCNMAESMWLHTH 283 (387)
Q Consensus 237 vII~D~~dp~~~~~~-----L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~ 283 (387)
+|++|++........ -...+++..+.+.|+|||++++.+.+.....+
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 347 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSD 347 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHH
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHH
Confidence 999997642111001 11346888999999999999876655444433
No 127
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.19 E-value=6.8e-11 Score=118.20 Aligned_cols=124 Identities=19% Similarity=0.215 Sum_probs=92.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC--CCCCeeE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~--~~~~fDv 237 (387)
..++|||+|||+|.++..+++. +..+|++||+++.+++.|++++... +++ ++++++.+|+.+++... ..++||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n--~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLN--GVE-DRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT--TCG-GGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHc--CCC-ccceEEECCHHHHHHHHHhhCCCCCE
Confidence 5679999999999999999987 3569999999999999999998754 222 28999999999887532 2458999
Q ss_pred EEEcCCCCCCCcccc-----chHHHHHHHHHhccCCCeEEecccccchhhhHHHH
Q 016578 238 IIVDSSDPVGPAQEL-----VEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIED 287 (387)
Q Consensus 238 II~D~~dp~~~~~~L-----~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~ 287 (387)
|++|++.-......+ ...+++..+.+.|+|||++++.+.+.....+.+..
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 347 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKD 347 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHH
Confidence 999876422111111 13468889999999999988766655444443333
No 128
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.19 E-value=7.5e-11 Score=112.18 Aligned_cols=107 Identities=21% Similarity=0.301 Sum_probs=83.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+.+.+|||||||+|..+..+++..+ .+|+++|+++.+++.+++.+.... + .++++++.+|+.+.. .++++||+|
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~~--~~~~~fD~v 154 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAG--L-ADNITVKYGSFLEIP--CEDNSYDFI 154 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHT--C-TTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcC--C-CcceEEEEcCcccCC--CCCCCEeEE
Confidence 5667999999999999999998742 499999999999999999875542 2 358999999987642 235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.......+. ...+++.++++|+|||++++..
T Consensus 155 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 155 WSQDAFLHSPD----KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecchhhhcCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 97643221111 3579999999999999998754
No 129
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.19 E-value=8e-11 Score=117.28 Aligned_cols=118 Identities=16% Similarity=0.201 Sum_probs=90.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC--CCCCeeE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~--~~~~fDv 237 (387)
..++|||+|||+|.++..+++. ..+|++||+++.+++.|++++... ++ .+++++.+|+.+++... ..++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n--~~--~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLN--GL--GNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHT--TC--TTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc--CC--CCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5679999999999999999987 479999999999999999998765 22 24999999999987542 1458999
Q ss_pred EEEcCCCCCCCcccc-----chHHHHHHHHHhccCCCeEEecccccchhhh
Q 016578 238 IIVDSSDPVGPAQEL-----VEKPFFDTIAKALRPGGVLCNMAESMWLHTH 283 (387)
Q Consensus 238 II~D~~dp~~~~~~L-----~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~ 283 (387)
|++|++.-......+ ...++++.+.+.|+|||++++.+.+.....+
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 333 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEP 333 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHH
Confidence 999976421111111 1246888999999999999987655544443
No 130
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.19 E-value=1e-10 Score=108.50 Aligned_cols=117 Identities=20% Similarity=0.352 Sum_probs=89.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccc-cCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPEL-AVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~-~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
....+|||+|||+|..+..+++. .+..+|+++|+++.+++.+++++... . .++++++.+|+.+. ..++++||
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~--~~~~~~~D 168 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ----VENVRFHLGKLEEA--ELEEAAYD 168 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEESCGGGC--CCCTTCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC----CCCEEEEECchhhc--CCCCCCcC
Confidence 45679999999999999999987 55679999999999999999987543 1 35899999998875 12346899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHH
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 294 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~ 294 (387)
+|++|..++. ++++.+.++|+|||.+++...+. ....++.+.+++
T Consensus 169 ~v~~~~~~~~---------~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~ 213 (258)
T 2pwy_A 169 GVALDLMEPW---------KVLEKAALALKPDRFLVAYLPNI----TQVLELVRAAEA 213 (258)
T ss_dssp EEEEESSCGG---------GGHHHHHHHEEEEEEEEEEESCH----HHHHHHHHHHTT
T ss_pred EEEECCcCHH---------HHHHHHHHhCCCCCEEEEEeCCH----HHHHHHHHHHHH
Confidence 9999765431 47999999999999998754322 233445455543
No 131
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.19 E-value=4.5e-11 Score=115.17 Aligned_cols=106 Identities=18% Similarity=0.226 Sum_probs=84.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
....+|||||||+|..+..+++.. ..+|++||+++.+++.|++++.... + +++++++.+|+.+.. .++++||+|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~--~~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELR--I-DDHVRSRVCNMLDTP--FDKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTT--C-TTTEEEEECCTTSCC--CCTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC--C-CCceEEEECChhcCC--CCCCCEeEE
Confidence 456799999999999999999874 3689999999999999999876542 2 348999999987642 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++........ ...+++.+.++|+|||++++..
T Consensus 190 ~~~~~l~~~~-----~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 190 WNNESTMYVD-----LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEESCGGGSC-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhCC-----HHHHHHHHHHHcCCCcEEEEEE
Confidence 9754322111 5679999999999999998654
No 132
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.19 E-value=7e-11 Score=111.93 Aligned_cols=103 Identities=15% Similarity=0.058 Sum_probs=82.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
.+.+|||||||+|..+..+++.. .+|++||+++.+++.+++++... ..+++++.+|+.+... +++||+|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~---~~~fD~i~ 189 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG--YDVTSWDHNENSIAFLNETKEKE-----NLNISTALYDINAANI---QENYDFIV 189 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCGGGCCC---CSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHc-----CCceEEEEeccccccc---cCCccEEE
Confidence 57799999999999999999884 49999999999999999988754 2289999999877532 56899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+.......+.. ....+++.+.+.|+|||++++.
T Consensus 190 ~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 190 STVVFMFLNRE--RVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp ECSSGGGSCGG--GHHHHHHHHHHTEEEEEEEEEE
T ss_pred EccchhhCCHH--HHHHHHHHHHHhcCCCcEEEEE
Confidence 87643222211 2346999999999999987653
No 133
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.19 E-value=6.5e-11 Score=109.33 Aligned_cols=105 Identities=10% Similarity=0.073 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC---CCCCe
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV---PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~---~~~~f 235 (387)
....+|||||||+|..+..+++... +|++||+|+.+++.++++++ ..+++++.+|+.+..... ....|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 4557899999999999999999864 89999999999999999874 348999999997743211 01249
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|+|++.......+... ...+++.++++|+|||++++.
T Consensus 126 d~v~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEK--RELLGQSLRILLGKQGAMYLI 162 (245)
T ss_dssp CEEEEESSSTTSCGGG--HHHHHHHHHHHHTTTCEEEEE
T ss_pred cEEEEcchhhcCCHHH--HHHHHHHHHHHcCCCCEEEEE
Confidence 9999876554433211 356999999999999987653
No 134
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.18 E-value=4.7e-11 Score=109.53 Aligned_cols=106 Identities=21% Similarity=0.255 Sum_probs=81.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+...+|||||||+|..+..+++. .+|+++|+++.+++.|++++... ..+++++.+|+.++. . .++||+|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v 100 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET-----NRHVDFWVQDMRELE--L-PEPVDAI 100 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCGGGCC--C-SSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc-----CCceEEEEcChhhcC--C-CCCcCEE
Confidence 34579999999999999999887 69999999999999999987653 357999999987652 2 3689999
Q ss_pred EEcC-C-CCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 239 IVDS-S-DPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 239 I~D~-~-dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
++.. . ....... ....+++.++++|+|||++++...+
T Consensus 101 ~~~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 101 TILCDSLNYLQTEA--DVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp EECTTGGGGCCSHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEeCCchhhcCCHH--HHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 9853 1 1111111 1346899999999999999975533
No 135
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.18 E-value=1.4e-10 Score=111.70 Aligned_cols=106 Identities=12% Similarity=0.073 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+..+|||||||+|..+..+++..+ .+|+++|+++.+++.+++.+... ++ +++++++.+|+.++ +++||+|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-----~~~fD~v 159 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASI--DT-NRSRQVLLQGWEDF-----AEPVDRI 159 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTS--CC-SSCEEEEESCGGGC-----CCCCSEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEECChHHC-----CCCcCEE
Confidence 4567999999999999999998732 49999999999999999987654 12 35799999998654 2689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.......+.. ....+++.+.++|+|||++++..
T Consensus 160 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 160 VSIEAFEHFGHE--NYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEESCGGGTCGG--GHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeChHHhcCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 976432211111 23579999999999999998764
No 136
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.18 E-value=6.5e-11 Score=117.85 Aligned_cols=112 Identities=23% Similarity=0.252 Sum_probs=86.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccC---C-CCCCCEEEEEcchhhHHh----h
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAV---G-FEDPRVRLHIGDAVEFLR----Q 229 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~---~-~~d~rv~v~~gD~~~~l~----~ 229 (387)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++..... + +..++++++.+|+.+... .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356799999999999999998863 456999999999999999998753310 1 344799999999887521 2
Q ss_pred CCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 230 VPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 230 ~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
.++++||+|++.......+. ...+++.++++|+|||+|++.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTN----KLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCC----HHHHHHHHHHHcCCCCEEEEE
Confidence 23568999998765432221 357999999999999999874
No 137
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.18 E-value=5.7e-11 Score=114.96 Aligned_cols=115 Identities=13% Similarity=0.147 Sum_probs=78.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCC--CCCEEEEEcch------hhHHhhC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE--DPRVRLHIGDA------VEFLRQV 230 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~--d~rv~v~~gD~------~~~l~~~ 230 (387)
+...+|||||||+|..+..+++.. ..+|+++|+++.+++.|++..+....... ..+++++++|. .+.....
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 346799999999998776666543 46899999999999999998765411000 01367888877 2222122
Q ss_pred CCCCeeEEEEcCCCCCC-CccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 231 PRGKYDAIIVDSSDPVG-PAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 231 ~~~~fDvII~D~~dp~~-~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
++++||+|++...-+.. ...+ ...+++.++++|+|||+|++...
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~--~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRH--YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTT--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHH--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 35689999975432211 1112 25799999999999999987553
No 138
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.18 E-value=6.1e-11 Score=116.84 Aligned_cols=111 Identities=22% Similarity=0.173 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+.++|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++ +.+++++.+|+.+. ..+.++||+|
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~~~~~~fD~I 137 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKAN--KL-DHVVTIIKGKVEEV--ELPVEKVDII 137 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTC--CCSSSCEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHc--CC-CCcEEEEECcHHHc--cCCCCceEEE
Confidence 35679999999999999999998 457999999995 999999987654 22 34799999998876 2335789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
+++........ .-....+++.+.+.|+|||+++....+
T Consensus 138 is~~~~~~l~~-~~~~~~~l~~~~r~LkpgG~li~~~~~ 175 (349)
T 3q7e_A 138 ISEWMGYCLFY-ESMLNTVLHARDKWLAPDGLIFPDRAT 175 (349)
T ss_dssp EECCCBBTBTB-TCCHHHHHHHHHHHEEEEEEEESCEEE
T ss_pred EEccccccccC-chhHHHHHHHHHHhCCCCCEEccccce
Confidence 98753221111 112346889999999999999855433
No 139
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.18 E-value=8.1e-11 Score=111.57 Aligned_cols=103 Identities=24% Similarity=0.340 Sum_probs=83.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
.+..+|||+|||+|..+..+++. .+..+|+++|+++.+++.+++++.... ..++++++.+|+.+.+ ++++||+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---g~~~v~~~~~d~~~~~---~~~~fD~ 182 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY---DIGNVRTSRSDIADFI---SDQMYDA 182 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS---CCTTEEEECSCTTTCC---CSCCEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC---CCCcEEEEECchhccC---cCCCccE
Confidence 45679999999999999999987 556799999999999999999875420 1258999999988743 2468999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
|++|.+++ ..+++.+.+.|+|||++++...
T Consensus 183 Vi~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 183 VIADIPDP---------WNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp EEECCSCG---------GGSHHHHHHTEEEEEEEEEEES
T ss_pred EEEcCcCH---------HHHHHHHHHHcCCCCEEEEEeC
Confidence 99976543 2478999999999999987543
No 140
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.17 E-value=2e-10 Score=101.04 Aligned_cols=102 Identities=22% Similarity=0.294 Sum_probs=79.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.++++++ +++++.+|+.+.. .++++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~---------~~~~~~~d~~~~~--~~~~~~D~i 111 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQG--HDVLGTDLDPILIDYAKQDFP---------EARWVVGDLSVDQ--ISETDFDLI 111 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTSC--CCCCCEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHCC--CcEEEEcCCHHHHHHHHHhCC---------CCcEEEcccccCC--CCCCceeEE
Confidence 467799999999999999999873 589999999999999999863 5789999987642 235689999
Q ss_pred EEcC-CCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDS-SDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~-~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+++. ........ ....+++.+.+.|+|||++++..
T Consensus 112 ~~~~~~~~~~~~~--~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 112 VSAGNVMGFLAED--GREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp EECCCCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcHHhhcChH--HHHHHHHHHHHHhCCCCEEEEEe
Confidence 9862 21111111 12568999999999999998754
No 141
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.17 E-value=3.7e-11 Score=117.88 Aligned_cols=117 Identities=19% Similarity=0.296 Sum_probs=89.1
Q ss_pred HHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH
Q 016578 147 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 226 (387)
Q Consensus 147 ~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~ 226 (387)
..++.+++. ..+.+|||||||+|.++..+++..+..+|+++|+|+.+++.+++++... +.+++++.+|+.++
T Consensus 186 ~~ll~~l~~---~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-----~~~~~~~~~d~~~~ 257 (343)
T 2pjd_A 186 QLLLSTLTP---HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-----GVEGEVFASNVFSE 257 (343)
T ss_dssp HHHHHHSCT---TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTT
T ss_pred HHHHHhcCc---CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCEEEEcccccc
Confidence 445555532 2356999999999999999999866669999999999999999998654 23467899998765
Q ss_pred HhhCCCCCeeEEEEcCCCCCCCc-cccchHHHHHHHHHhccCCCeEEecc
Q 016578 227 LRQVPRGKYDAIIVDSSDPVGPA-QELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 227 l~~~~~~~fDvII~D~~dp~~~~-~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
. +++||+|+++.+...+.. ..-....+++.++++|+|||.+++..
T Consensus 258 ~----~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 258 V----KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp C----CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred c----cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 3 468999999876544321 11123578999999999999998754
No 142
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.17 E-value=4.4e-11 Score=107.36 Aligned_cols=119 Identities=18% Similarity=0.123 Sum_probs=84.6
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
.|.+++..+.. .+.+.+|||||||+|..+..++... ..+|+++|+++.+++.+++++... .++++++.+|+.
T Consensus 10 ~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~ 81 (209)
T 2p8j_A 10 QLYRFLKYCNE--SNLDKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDIR 81 (209)
T ss_dssp HHHHHHHHHHH--SSSCSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCTT
T ss_pred hHHHHHHHHhc--cCCCCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECchh
Confidence 35555554432 2456799999999999754444433 359999999999999999987654 357899999987
Q ss_pred hHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 225 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 225 ~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+.. .++++||+|++...-...+.. ....+++.+++.|+|||++++..
T Consensus 82 ~~~--~~~~~fD~v~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 82 KLP--FKDESMSFVYSYGTIFHMRKN--DVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp SCC--SCTTCEEEEEECSCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCC--CCCCceeEEEEcChHHhCCHH--HHHHHHHHHHHHcCCCcEEEEEE
Confidence 642 235689999975432111111 13568999999999999998754
No 143
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.17 E-value=4.8e-11 Score=111.55 Aligned_cols=101 Identities=20% Similarity=0.263 Sum_probs=79.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.++ +++++.+|+.++.. +++||+|
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~---~~~fD~v 114 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP---------DAVLHHGDMRDFSL---GRRFSAV 114 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTCCC---SCCEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC---------CCEEEECChHHCCc---cCCcCEE
Confidence 456899999999999999999874 589999999999999999853 68999999877532 4689999
Q ss_pred EEcC-CCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDS-SDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~-~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++.. .-...+. .--...+++.++++|+|||++++.
T Consensus 115 ~~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 115 TCMFSSIGHLAG-QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EECTTGGGGSCH-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEcCchhhhcCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9864 2211110 001346899999999999999985
No 144
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.17 E-value=6.9e-11 Score=109.50 Aligned_cols=105 Identities=20% Similarity=0.293 Sum_probs=81.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.. .+|+++|+|+.+++.+++++... ..+++++.+|+.+.. . +++||+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~--~-~~~fD~v 109 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG--YEVVGLDLHEEMLRVARRKAKER-----NLKIEFLQGDVLEIA--F-KNEFDAV 109 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEESCGGGCC--C-CSCEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEECChhhcc--c-CCCccEE
Confidence 456799999999999999999874 58999999999999999987654 347999999988742 2 3589999
Q ss_pred EEcCCC-CCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSD-PVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~d-p~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.... ...... ....+++.++++|+|||++++..
T Consensus 110 ~~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 110 TMFFSTIMYFDEE--DLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EECSSGGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCchhcCCHH--HHHHHHHHHHHHcCCCeEEEEec
Confidence 975322 111111 13568999999999999998754
No 145
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.16 E-value=1.6e-10 Score=108.03 Aligned_cols=130 Identities=15% Similarity=0.085 Sum_probs=94.6
Q ss_pred cCCCCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCC
Q 016578 156 CSIPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRG 233 (387)
Q Consensus 156 ~~~~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~ 233 (387)
+...+..+|||||||+|.++..+++. .+..+|++||+++.+++.+++.... .+++..+.+|....... ...+
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~------~~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD------RRNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT------CTTEEEEESCTTCGGGGTTTCC
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh------hcCeeEEEEeccCccccccccc
Confidence 33456779999999999999999987 5667999999999999999988753 36899999998764321 1346
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc--ccc---chhhhHHHHHHHHHHHH-cC
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA--ESM---WLHTHLIEDMISICRET-FK 297 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~--~s~---~~~~~~~~~~~~~l~~~-F~ 297 (387)
.+|+|++|...+.. ...+++.+++.|||||.+++.. .+. ......+++..+.+++. |.
T Consensus 147 ~vDvVf~d~~~~~~------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~ 210 (233)
T 4df3_A 147 GVDGLYADVAQPEQ------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLE 210 (233)
T ss_dssp CEEEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCC
T ss_pred eEEEEEEeccCChh------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCE
Confidence 89999998765532 2458999999999999988632 111 11123445555666554 54
No 146
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.16 E-value=1.6e-10 Score=112.03 Aligned_cols=112 Identities=22% Similarity=0.268 Sum_probs=85.3
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
+..++..+. ..++.+|||||||+|.++..+++..+ ..+|+++|+|+++++.|++++... + -++++++.+|+.
T Consensus 64 ~~~l~~~l~---~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--g--~~~v~~~~~d~~ 136 (317)
T 1dl5_A 64 MALFMEWVG---LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL--G--IENVIFVCGDGY 136 (317)
T ss_dssp HHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT--T--CCSEEEEESCGG
T ss_pred HHHHHHhcC---CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc--C--CCCeEEEECChh
Confidence 444554443 24567999999999999999998754 357999999999999999988654 2 235999999998
Q ss_pred hHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 225 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 225 ~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+.+.. .++||+|+++...+..+ +.+.+.|+|||+++++..
T Consensus 137 ~~~~~--~~~fD~Iv~~~~~~~~~----------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 137 YGVPE--FSPYDVIFVTVGVDEVP----------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GCCGG--GCCEEEEEECSBBSCCC----------HHHHHHEEEEEEEEEEBC
T ss_pred hcccc--CCCeEEEEEcCCHHHHH----------HHHHHhcCCCcEEEEEEC
Confidence 75432 35899999886543211 478889999999998653
No 147
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.16 E-value=1.1e-10 Score=114.83 Aligned_cols=112 Identities=17% Similarity=0.187 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
....+|||+|||+|.++.+++... +..+|+++|+|+.+++.|++++... +++ +++++.+|+.++... .+.||+
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~--g~~--~i~~~~~D~~~~~~~--~~~~D~ 275 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS--GLS--WIRFLRADARHLPRF--FPEVDR 275 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT--TCT--TCEEEECCGGGGGGT--CCCCSE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc--CCC--ceEEEeCChhhCccc--cCCCCE
Confidence 456799999999999999999864 5679999999999999999998765 222 899999999887533 346999
Q ss_pred EEEcCCCCCCCc--ccc--chHHHHHHHHHhccCCCeEEeccc
Q 016578 238 IIVDSSDPVGPA--QEL--VEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 238 II~D~~dp~~~~--~~L--~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
|++|++...... ..+ ....+++.+++.|+|||.+++.+.
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999987543221 111 125688999999999999987543
No 148
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.16 E-value=7.8e-11 Score=116.98 Aligned_cols=101 Identities=19% Similarity=0.243 Sum_probs=81.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
.+++||||| |+|.++..+++..+..+|++||+|+.+++.|++++... +++ +++++.+|+.+.+....+++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~--g~~--~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI--GYE--DIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--TCC--CEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC--CEEEEEChhhhhchhhccCCccEEE
Confidence 467999999 99999999998765579999999999999999998765 222 8999999998854321235899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhccCCCe
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAKALRPGGV 270 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGv 270 (387)
+|.+. ... . ...+++.+.++|+|||.
T Consensus 247 ~~~p~--~~~-~--~~~~l~~~~~~LkpgG~ 272 (373)
T 2qm3_A 247 TDPPE--TLE-A--IRAFVGRGIATLKGPRC 272 (373)
T ss_dssp ECCCS--SHH-H--HHHHHHHHHHTBCSTTC
T ss_pred ECCCC--chH-H--HHHHHHHHHHHcccCCe
Confidence 98743 222 1 36799999999999993
No 149
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.16 E-value=1.1e-10 Score=116.20 Aligned_cols=109 Identities=19% Similarity=0.161 Sum_probs=84.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++++|||||||+|.++..+++.+ ..+|++||++ .+++.|++++... ++ ..+++++.+|+.++. . +++||+|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~--~-~~~~D~I 133 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKAN--NL-DHIVEVIEGSVEDIS--L-PEKVDVI 133 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHT--TC-TTTEEEEESCGGGCC--C-SSCEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHc--CC-CCeEEEEECchhhcC--c-CCcceEE
Confidence 467799999999999999999984 4699999999 9999999987654 22 357999999998753 2 2689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+++......... -....+++.+.+.|+|||+++....
T Consensus 134 v~~~~~~~l~~e-~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 134 ISEWMGYFLLRE-SMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EECCCBTTBTTT-CTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEcChhhcccch-HHHHHHHHHHHhhCCCCeEEEEecC
Confidence 987633221111 1234589999999999999986543
No 150
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=1.8e-10 Score=104.32 Aligned_cols=111 Identities=19% Similarity=0.167 Sum_probs=83.6
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
...++..+. ..+..+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++.... -++++++.+|+.
T Consensus 66 ~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~ 138 (215)
T 2yxe_A 66 VGMMCELLD---LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG----YDNVIVIVGDGT 138 (215)
T ss_dssp HHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEESCGG
T ss_pred HHHHHHhhC---CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEECCcc
Confidence 344444442 2456799999999999999999874 34699999999999999999886541 246999999986
Q ss_pred hHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 225 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 225 ~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
..+.. .++||+|+++...+.. .+.+.+.|+|||++++..
T Consensus 139 ~~~~~--~~~fD~v~~~~~~~~~----------~~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 139 LGYEP--LAPYDRIYTTAAGPKI----------PEPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp GCCGG--GCCEEEEEESSBBSSC----------CHHHHHTEEEEEEEEEEE
T ss_pred cCCCC--CCCeeEEEECCchHHH----------HHHHHHHcCCCcEEEEEE
Confidence 54432 3579999987654321 247889999999998754
No 151
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=2.2e-10 Score=108.25 Aligned_cols=99 Identities=18% Similarity=0.278 Sum_probs=79.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..+.+|||||||+|..+..+++. ..+|+++|+++.+++.+++.+ ++++++.+|+.++. . +++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS--GAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNFR--V-DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhCC--c-CCCcCEE
Confidence 45679999999999999999983 469999999999999999875 36789999987642 2 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.......+ -...+++.++++|+|||.+++..
T Consensus 122 ~~~~~l~~~~----d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 122 FSNAMLHWVK----EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp EEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhhCc----CHHHHHHHHHHhcCCCcEEEEEe
Confidence 9865432222 13468999999999999998754
No 152
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.15 E-value=1.3e-10 Score=103.95 Aligned_cols=100 Identities=13% Similarity=0.272 Sum_probs=79.5
Q ss_pred EEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcC
Q 016578 163 TVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDS 242 (387)
Q Consensus 163 ~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~ 242 (387)
+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+... ..+++++.+|+.+.. .++++||+|++..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG--YEVTAVDQSSVGLAKAKQLAQEK-----GVKITTVQSNLADFD--IVADAWEGIVSIF 102 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHH-----TCCEEEECCBTTTBS--CCTTTCSEEEEEC
T ss_pred CEEEECCCCCHhHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcChhhcC--CCcCCccEEEEEh
Confidence 99999999999999999874 59999999999999999988654 247999999987652 2356899999843
Q ss_pred CCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 243 SDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 243 ~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
. .. +.. ....+++.+.+.|+|||.+++..
T Consensus 103 ~-~~-~~~--~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 103 C-HL-PSS--LRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp C-CC-CHH--HHHHHHHHHHTTCCSSEEEEEEE
T ss_pred h-cC-CHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 11 111 13568999999999999988653
No 153
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.15 E-value=2.9e-10 Score=108.07 Aligned_cols=117 Identities=17% Similarity=0.120 Sum_probs=88.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC--CCCCe
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~--~~~~f 235 (387)
....+|||+|||+|+.+..+++.. +..+|+++|+|+..++.+++++.... -++++++.+|+.++.... ..++|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG----VLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC----CCcEEEEeCChHhcchhhhhccccC
Confidence 456799999999999999999863 33799999999999999999987652 248999999998875421 14589
Q ss_pred eEEEEcCCCCC-CCcc-------------ccchHHHHHHHHHhccCCCeEEecccccc
Q 016578 236 DAIIVDSSDPV-GPAQ-------------ELVEKPFFDTIAKALRPGGVLCNMAESMW 279 (387)
Q Consensus 236 DvII~D~~dp~-~~~~-------------~L~~~ef~~~l~~~LkpgGvlv~q~~s~~ 279 (387)
|+|++|.+... +... .-...++++.+.+.|+|||+++..+.+..
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 99999965321 1100 01246789999999999999987665543
No 154
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.15 E-value=6.1e-11 Score=112.11 Aligned_cols=111 Identities=20% Similarity=0.185 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++++.... . ..+++++.+|+.+.... .+++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~-~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMK--R-RFKVFFRAQDSYGRHMD-LGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSC--C-SSEEEEEESCTTTSCCC-CSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--C-CccEEEEECCccccccC-CCCCcCEE
Confidence 566799999999999999988874 4599999999999999999876541 1 24799999998764211 25689999
Q ss_pred EEcCCCCC--CCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 239 IVDSSDPV--GPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~--~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
++....+. .... ....+++.++++|+|||++++...
T Consensus 138 ~~~~~l~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 138 SSQFSFHYAFSTSE--SLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEESCGGGGGSSHH--HHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhhhcCCHH--HHHHHHHHHHHhcCCCCEEEEEEC
Confidence 98754321 1111 135689999999999999997553
No 155
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.15 E-value=1.9e-10 Score=112.77 Aligned_cols=114 Identities=16% Similarity=0.172 Sum_probs=88.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
...++|||+|||+|.++.. ++ ...+|+++|+|+.+++.+++++... ++ +++++++.+|+.+++ ++||+|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n--~l-~~~v~~~~~D~~~~~-----~~fD~V 262 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLN--KL-EHKIIPILSDVREVD-----VKGNRV 262 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCGGGCC-----CCEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEECChHHhc-----CCCcEE
Confidence 4567999999999999999 87 3579999999999999999998765 22 248999999999875 579999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETF 296 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F 296 (387)
++|.+.. ..++++.+.+.|+|||++++...+.. .....+.+++.+
T Consensus 263 i~dpP~~--------~~~~l~~~~~~L~~gG~l~~~~~~~~-----~~~~~~~l~~~~ 307 (336)
T 2yx1_A 263 IMNLPKF--------AHKFIDKALDIVEEGGVIHYYTIGKD-----FDKAIKLFEKKC 307 (336)
T ss_dssp EECCTTT--------GGGGHHHHHHHEEEEEEEEEEEEESS-----SHHHHHHHHHHS
T ss_pred EECCcHh--------HHHHHHHHHHHcCCCCEEEEEEeecC-----chHHHHHHHHhc
Confidence 9986421 12589999999999999887544333 234445555553
No 156
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.15 E-value=1.7e-10 Score=106.22 Aligned_cols=105 Identities=18% Similarity=0.131 Sum_probs=79.8
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHh-hCCCCCe
Q 016578 158 IPSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR-QVPRGKY 235 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~-~~~~~~f 235 (387)
.....+|||||||+|.++..+++.. +..+|++||+++.+++.+.+.... .++++++.+|+.+... ....++|
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK------RTNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH------CTTEEEECSCTTCGGGGGGGCCCE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc------cCCeEEEEcccCChhhhcccCCcE
Confidence 3456799999999999999999873 456999999999887777665543 2589999999987421 1124689
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|+|++|.+.+. ....+++.+.+.|+|||++++.
T Consensus 149 D~V~~~~~~~~------~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 149 DVIFADVAQPD------QTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEEEECCCCTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEcCCCcc------HHHHHHHHHHHHcCCCeEEEEE
Confidence 99999876221 1234688899999999999874
No 157
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.15 E-value=5.8e-11 Score=112.60 Aligned_cols=117 Identities=15% Similarity=0.084 Sum_probs=83.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~fDv 237 (387)
.++.+|||||||+|..+..+++.. .+|+++|+|+.+++.|+++..........+++.+..+|+.+...+ ..+++||+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 356799999999999999999984 499999999999999998753221101124789999998876422 23578999
Q ss_pred EEEc-CCC-CCCC--ccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 238 IIVD-SSD-PVGP--AQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 238 II~D-~~d-p~~~--~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
|++. ... .... ...-....+++.++++|+|||++++...+
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9985 221 1111 00011356999999999999999976533
No 158
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.14 E-value=1.8e-10 Score=123.55 Aligned_cols=114 Identities=14% Similarity=0.229 Sum_probs=89.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
+.++|||+|||+|+++..+++.. ..+|++||+|+.+++.+++++... ++++.+++++.+|++++++.. .++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~n--gl~~~~v~~i~~D~~~~l~~~-~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLN--GLTGRAHRLIQADCLAWLREA-NEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TCCSTTEEEEESCHHHHHHHC-CCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHc--CCCccceEEEecCHHHHHHhc-CCCccEEE
Confidence 56799999999999999999864 468999999999999999998765 344468999999999998764 46899999
Q ss_pred EcCCCCC-CC-ccc-----cchHHHHHHHHHhccCCCeEEecccc
Q 016578 240 VDSSDPV-GP-AQE-----LVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 240 ~D~~dp~-~~-~~~-----L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
+|++.-. .. ... -...++++.+.+.|+|||+|++...+
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9986411 10 000 12346788999999999999865443
No 159
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.14 E-value=1.9e-10 Score=108.44 Aligned_cols=119 Identities=18% Similarity=0.267 Sum_probs=90.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccc-cCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPEL-AVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~-~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
....+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... . .+ .++++++.+|+.+.. .+++.||
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g-~~-~~~v~~~~~d~~~~~--~~~~~~D 173 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG-QP-PDNWRLVVSDLADSE--LPDGSVD 173 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT-SC-CTTEEEECSCGGGCC--CCTTCEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CC-CCcEEEEECchHhcC--CCCCcee
Confidence 45679999999999999999985 44579999999999999999987543 1 01 358999999987752 2246899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHH
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 294 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~ 294 (387)
+|+++..+++ ++++.+.++|+|||.+++...+. ..+.++.+.+++
T Consensus 174 ~v~~~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~----~~~~~~~~~l~~ 218 (280)
T 1i9g_A 174 RAVLDMLAPW---------EVLDAVSRLLVAGGVLMVYVATV----TQLSRIVEALRA 218 (280)
T ss_dssp EEEEESSCGG---------GGHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHH
T ss_pred EEEECCcCHH---------HHHHHHHHhCCCCCEEEEEeCCH----HHHHHHHHHHHh
Confidence 9999876432 47999999999999998755332 234555566664
No 160
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.13 E-value=3.2e-10 Score=103.72 Aligned_cols=107 Identities=20% Similarity=0.262 Sum_probs=82.6
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
...++..+. ..+..+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... . +++++.+|+.+
T Consensus 59 ~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~-----~-~v~~~~~d~~~ 127 (231)
T 1vbf_A 59 GIFMLDELD---LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY-----N-NIKLILGDGTL 127 (231)
T ss_dssp HHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC-----S-SEEEEESCGGG
T ss_pred HHHHHHhcC---CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc-----C-CeEEEECCccc
Confidence 344554443 2456799999999999999999885 69999999999999999988643 2 89999999877
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.+.. .++||+|+++...+.. .+.+.+.|+|||++++..
T Consensus 128 ~~~~--~~~fD~v~~~~~~~~~----------~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 128 GYEE--EKPYDRVVVWATAPTL----------LCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp CCGG--GCCEEEEEESSBBSSC----------CHHHHHTEEEEEEEEEEE
T ss_pred cccc--CCCccEEEECCcHHHH----------HHHHHHHcCCCcEEEEEE
Confidence 3322 4589999987643221 246888999999998754
No 161
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.13 E-value=2.9e-10 Score=111.66 Aligned_cols=107 Identities=19% Similarity=0.139 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++++|||||||+|.++..+++.+ ..+|++||+++ +++.|++++... ++ .++++++.+|+.++ ..++++||+|
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~--~~~~~~~D~I 135 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLN--KL-EDTITLIKGKIEEV--HLPVEKVDVI 135 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTS--CCSCSCEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHc--CC-CCcEEEEEeeHHHh--cCCCCcEEEE
Confidence 456799999999999999999884 56999999997 899999987654 22 35899999998875 2334689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
+++....... .......+++.+.+.|+|||+++.
T Consensus 136 vs~~~~~~l~-~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 136 ISEWMGYFLL-FESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EECCCBTTBT-TTCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEcCchhhcc-CHHHHHHHHHHHHhhcCCCcEEEc
Confidence 9875211111 111134588999999999999984
No 162
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.13 E-value=6.1e-11 Score=113.29 Aligned_cols=120 Identities=17% Similarity=0.241 Sum_probs=87.0
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
...++..++ +.+.+|||||||+|..+..+++.. .+|++||+++.+++.|++++......+ ..+++++.+|+.+
T Consensus 72 ~~~~~~~~~----~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~v~~~~~d~~~ 144 (299)
T 3g2m_A 72 AREFATRTG----PVSGPVLELAAGMGRLTFPFLDLG--WEVTALELSTSVLAAFRKRLAEAPADV-RDRCTLVQGDMSA 144 (299)
T ss_dssp HHHHHHHHC----CCCSCEEEETCTTTTTHHHHHTTT--CCEEEEESCHHHHHHHHHHHHTSCHHH-HTTEEEEECBTTB
T ss_pred HHHHHHhhC----CCCCcEEEEeccCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHhhccccc-ccceEEEeCchhc
Confidence 445555543 345599999999999999999884 689999999999999999886531000 0589999999887
Q ss_pred HHhhCCCCCeeEEEEcCC-CCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 226 FLRQVPRGKYDAIIVDSS-DPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~-dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
+. . +++||+|++... ....+.. ....+++.++++|+|||+|++...+
T Consensus 145 ~~--~-~~~fD~v~~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 145 FA--L-DKRFGTVVISSGSINELDEA--DRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp CC--C-SCCEEEEEECHHHHTTSCHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CC--c-CCCcCEEEECCcccccCCHH--HHHHHHHHHHHHcCCCcEEEEEeec
Confidence 52 2 568999986421 1111110 1256899999999999999986543
No 163
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.13 E-value=1.6e-11 Score=113.41 Aligned_cols=103 Identities=14% Similarity=0.062 Sum_probs=80.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
.+.+|||||||+|..+..+++.. .+|+++|+|+.+++.+++++.... + .++++++.+|+.++.. +++||+|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~~~---~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYG--I-ADKIEFICGDFLLLAS---FLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTT--C-GGGEEEEESCHHHHGG---GCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcC--C-CcCeEEEECChHHhcc---cCCCCEEE
Confidence 56799999999999999999975 799999999999999999886541 1 2489999999998762 46899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++.+....... ...+..++++|+|||++++.
T Consensus 150 ~~~~~~~~~~~----~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWGGPDYA----TAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCSSGGGG----GSSSBCTTTSCSSCHHHHHH
T ss_pred ECCCcCCcchh----hhHHHHHHhhcCCcceeHHH
Confidence 88654321111 11344678899999997653
No 164
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.13 E-value=2.5e-10 Score=104.29 Aligned_cols=118 Identities=22% Similarity=0.210 Sum_probs=85.6
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCC-CCCCCEEEEEcc
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVG-FEDPRVRLHIGD 222 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~-~~d~rv~v~~gD 222 (387)
.+..++..+.. ...+..+|||||||+|..+..+++. .+..+|+++|+++.+++.+++++...... +...+++++.+|
T Consensus 63 ~~~~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 141 (226)
T 1i1n_A 63 MHAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD 141 (226)
T ss_dssp HHHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred HHHHHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC
Confidence 34556655532 1245679999999999999999987 34459999999999999999987653100 012479999999
Q ss_pred hhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 223 AVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 223 ~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+...... .+.||+|+++...+ .+++.+.+.|+|||++++..
T Consensus 142 ~~~~~~~--~~~fD~i~~~~~~~----------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 142 GRMGYAE--EAPYDAIHVGAAAP----------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp GGGCCGG--GCCEEEEEECSBBS----------SCCHHHHHTEEEEEEEEEEE
T ss_pred cccCccc--CCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEE
Confidence 8754322 35799999876432 13468889999999998754
No 165
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.12 E-value=8.4e-11 Score=107.68 Aligned_cols=108 Identities=17% Similarity=0.174 Sum_probs=83.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+... ..+++++.+|+.++. . .++||+|
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v 105 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQ-----GLKPRLACQDISNLN--I-NRKFDLI 105 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHT-----TCCCEEECCCGGGCC--C-SCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhc-----CCCeEEEecccccCC--c-cCCceEE
Confidence 366799999999999999999874 58999999999999999987653 237999999987752 2 2689999
Q ss_pred EEcC-CCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 239 IVDS-SDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 239 I~D~-~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
++.. .-+..+. .-....+++.++++|+|||++++...+
T Consensus 106 ~~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 106 TCCLDSTNYIID-SDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp EECTTGGGGCCS-HHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEcCccccccCC-HHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9864 3222110 011356899999999999999975433
No 166
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.12 E-value=1.4e-10 Score=107.90 Aligned_cols=107 Identities=10% Similarity=0.109 Sum_probs=84.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
++..+|||||||+|.++..+++..+..+|+++|+|+..++.|++++... ++. .+++++.+|+++.+.. .++||+|
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~-~~i~~~~~d~l~~l~~--~~~~D~I 88 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH--GLK-EKIQVRLANGLAAFEE--TDQVSVI 88 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCT-TTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-ceEEEEECchhhhccc--CcCCCEE
Confidence 4557999999999999999999877789999999999999999998765 233 4899999999876532 2269998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
++... ...+ -.+++....+.|+++|.|++|..
T Consensus 89 viaG~-----Gg~~-i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 89 TIAGM-----GGRL-IARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEEE-----CHHH-HHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEcCC-----ChHH-HHHHHHHHHHHhCCCCEEEEECC
Confidence 86321 1111 34689999999999999998653
No 167
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.11 E-value=1.4e-10 Score=106.03 Aligned_cols=102 Identities=23% Similarity=0.290 Sum_probs=78.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+ ++++++.+|+.++. . +++||+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~~D~v 104 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR--L-GRKFSAV 104 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc--c-CCCCcEE
Confidence 567899999999999999999875 38999999999999999975 36899999987642 2 4689999
Q ss_pred EEcC-CCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDS-SDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~-~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.. .....+. .-....+++.++++|+|||.+++..
T Consensus 105 ~~~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 105 VSMFSSVGYLKT-TEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp EECTTGGGGCCS-HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEcCchHhhcCC-HHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9532 1111110 0113568999999999999999753
No 168
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.11 E-value=7.6e-11 Score=108.25 Aligned_cols=92 Identities=10% Similarity=0.127 Sum_probs=75.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCC-CCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~-~~~fDv 237 (387)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.++++. ++++++.+|+.+.+. .+ +++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~-~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQA--ARWAAYDFSPELLKLARANA---------PHADVYEWNGKGELP-AGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHC---------TTSEEEECCSCSSCC-TTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhC---------CCceEEEcchhhccC-CcCCCCEEE
Confidence 456799999999999999999983 69999999999999999983 478999999865443 22 568999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEE
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLC 272 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv 272 (387)
|++.. + ...+++.+++.|+|||+++
T Consensus 115 v~~~~-~---------~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 115 IVSRR-G---------PTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEES-C---------CSGGGGGHHHHEEEEEEEE
T ss_pred EEeCC-C---------HHHHHHHHHHHcCCCcEEE
Confidence 99862 1 1136889999999999998
No 169
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.11 E-value=2.3e-10 Score=104.55 Aligned_cols=105 Identities=15% Similarity=0.101 Sum_probs=81.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-----CCceEEEEeCCHHHHHHHHhhcccccC-CCCCCCEEEEEcchhhHH----h
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-----SVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFL----R 228 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-----~~~~Vt~VEiD~~vi~~ar~~~~~~~~-~~~d~rv~v~~gD~~~~l----~ 228 (387)
.+..+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++..... .+..++++++.+|+.+.. .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 456799999999999999999874 345999999999999999998865410 001358999999998743 2
Q ss_pred hCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 229 QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 229 ~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
. .++||+|+++...+. +++.+.+.|+|||++++..
T Consensus 159 ~--~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 159 E--LGLFDAIHVGASASE----------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp H--HCCEEEEEECSBBSS----------CCHHHHHHEEEEEEEEEEE
T ss_pred c--CCCcCEEEECCchHH----------HHHHHHHhcCCCcEEEEEE
Confidence 2 357999998765431 3468899999999998743
No 170
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.11 E-value=5.1e-11 Score=111.09 Aligned_cols=113 Identities=17% Similarity=0.222 Sum_probs=80.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhc--CCCceEEEEeCCHHHHHHHHhhcccccC-CCCCCC---------------------
Q 016578 160 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAV-GFEDPR--------------------- 215 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~--~~~~~Vt~VEiD~~vi~~ar~~~~~~~~-~~~d~r--------------------- 215 (387)
.+.+|||+|||+|.++..+++. .+..+|+++|+|+.+++.|++++..... ++ ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL-TARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH-HHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc-cccchhhhhhhhhcccccchhhhh
Confidence 4569999999999999999886 4457999999999999999987643200 00 001
Q ss_pred ----EE-------------EEEcchhhHHhh---CCCCCeeEEEEcCCCCCCCc-c----ccchHHHHHHHHHhccCCCe
Q 016578 216 ----VR-------------LHIGDAVEFLRQ---VPRGKYDAIIVDSSDPVGPA-Q----ELVEKPFFDTIAKALRPGGV 270 (387)
Q Consensus 216 ----v~-------------v~~gD~~~~l~~---~~~~~fDvII~D~~dp~~~~-~----~L~~~ef~~~l~~~LkpgGv 270 (387)
++ ++.+|..+.+.. ...++||+|+++.+...... . .-....+++.+.++|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 55 999998876421 02348999999864311110 0 01234689999999999999
Q ss_pred EEe
Q 016578 271 LCN 273 (387)
Q Consensus 271 lv~ 273 (387)
+++
T Consensus 210 l~~ 212 (250)
T 1o9g_A 210 IAV 212 (250)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 171
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.10 E-value=1e-09 Score=104.54 Aligned_cols=108 Identities=18% Similarity=0.208 Sum_probs=82.1
Q ss_pred CCCEEEEEcCcc---cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH--H-------
Q 016578 160 SPKTVLVVGGGD---GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF--L------- 227 (387)
Q Consensus 160 ~p~~VL~IG~G~---G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~--l------- 227 (387)
...+|||||||+ |.++..+.+..+..+|++||+|+.|++.|++.+.. .++++++.+|+.+. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 457999999999 98887777665567999999999999999998742 36899999998753 1
Q ss_pred hhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 228 RQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 228 ~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.....++||+|++...-+..+.. -...+++.++++|+|||.|++..
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~--~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPD--VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTT--THHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCCCCCEEEEEechhhhCCcH--HHHHHHHHHHHhCCCCcEEEEEE
Confidence 11222479999987554332221 13568999999999999998643
No 172
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.10 E-value=1.9e-10 Score=115.64 Aligned_cols=121 Identities=16% Similarity=0.192 Sum_probs=86.0
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccc-----cCCCCCCCEEEEE
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPEL-----AVGFEDPRVRLHI 220 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~-----~~~~~d~rv~v~~ 220 (387)
+.+++..+.+ ....+|||||||+|.++..+++..+..+|++||+++.++++|+++.... ..++...+++++.
T Consensus 162 i~~il~~l~l---~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 162 VAQMIDEIKM---TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHCC---CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 4556655533 5667999999999999999997766667999999999999998754221 0123346899999
Q ss_pred cchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 221 GDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 221 gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+|+.+..-...-..||+|+++.+. ..+ . ....++.+.+.|+|||+|++.
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~-F~p--d--l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFA-FGP--E--VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTT-CCH--H--HHHHHHHHHTTSCTTCEEEES
T ss_pred CcccCCccccccCCccEEEEcccc-cCc--h--HHHHHHHHHHcCCCCcEEEEe
Confidence 998764221101369999987542 111 1 234677889999999999863
No 173
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.10 E-value=2.9e-10 Score=104.99 Aligned_cols=111 Identities=22% Similarity=0.248 Sum_probs=82.6
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
...++..+. ..+..+|||||||+|..+..+++..+ .+|+++|+++.+++.+++++... + -++++++.+|+..
T Consensus 80 ~~~~~~~l~---~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~--~--~~~v~~~~~d~~~ 151 (235)
T 1jg1_A 80 VAIMLEIAN---LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERA--G--VKNVHVILGDGSK 151 (235)
T ss_dssp HHHHHHHHT---CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHT--T--CCSEEEEESCGGG
T ss_pred HHHHHHhcC---CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHc--C--CCCcEEEECCccc
Confidence 344554443 24567999999999999999998755 79999999999999999988654 2 2359999999843
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
-+.. ..+||+|+++...+.. .+.+.+.|+|||++++...
T Consensus 152 ~~~~--~~~fD~Ii~~~~~~~~----------~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 152 GFPP--KAPYDVIIVTAGAPKI----------PEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CCGG--GCCEEEEEECSBBSSC----------CHHHHHTEEEEEEEEEEEC
T ss_pred CCCC--CCCccEEEECCcHHHH----------HHHHHHhcCCCcEEEEEEe
Confidence 3222 2359999987643221 2367889999999987553
No 174
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.10 E-value=2e-10 Score=105.34 Aligned_cols=117 Identities=19% Similarity=0.129 Sum_probs=84.5
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCC------ceEEEEeCCHHHHHHHHhhcccccC-CCCCCCEEE
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSV------ELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRL 218 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~------~~Vt~VEiD~~vi~~ar~~~~~~~~-~~~d~rv~v 218 (387)
+..++..+.. ......+|||||||+|..+..+++..+. .+|+++|+++.+++.+++++..... .+..+++++
T Consensus 71 ~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 149 (227)
T 1r18_A 71 HAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLI 149 (227)
T ss_dssp HHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEE
Confidence 4455554421 1234569999999999999999885332 4899999999999999998765310 000258999
Q ss_pred EEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 219 HIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 219 ~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+.+|+.+.+.. .++||+|+++...+. +.+.+.+.|+|||++++..
T Consensus 150 ~~~d~~~~~~~--~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 150 VEGDGRKGYPP--NAPYNAIHVGAAAPD----------TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp EESCGGGCCGG--GCSEEEEEECSCBSS----------CCHHHHHTEEEEEEEEEEE
T ss_pred EECCcccCCCc--CCCccEEEECCchHH----------HHHHHHHHhcCCCEEEEEE
Confidence 99999874332 258999998765432 2367899999999998754
No 175
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.10 E-value=2.4e-09 Score=96.21 Aligned_cols=101 Identities=21% Similarity=0.256 Sum_probs=79.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.+++++... ..+++++.+|+.++ +++||+|
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-----~~~~D~v 116 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEF-----KGKFKVFIGDVSEF-----NSRVDIV 116 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGG-----TTSEEEEESCGGGC-----CCCCSEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHc-----CCCEEEEECchHHc-----CCCCCEE
Confidence 356799999999999999999874 458999999999999999998754 12799999998774 2489999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++|.+...... -....+++.+.+.| |++++..
T Consensus 117 ~~~~p~~~~~~--~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 117 IMNPPFGSQRK--HADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp EECCCCSSSST--TTTHHHHHHHHHHC--SEEEEEE
T ss_pred EEcCCCccccC--CchHHHHHHHHHhc--CcEEEEE
Confidence 99976533221 12456888999888 6666643
No 176
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.10 E-value=6.7e-10 Score=100.19 Aligned_cols=150 Identities=17% Similarity=0.243 Sum_probs=95.9
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
..|++....+. ++..+|||||||+|+.+..+++. ..+|++||+++.. + .++++++.+|+.+
T Consensus 13 L~ei~~~~~~~--~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~--------~-------~~~v~~~~~D~~~ 73 (191)
T 3dou_A 13 LEFLLDRYRVV--RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME--------E-------IAGVRFIRCDIFK 73 (191)
T ss_dssp HHHHHHHHCCS--CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC--------C-------CTTCEEEECCTTS
T ss_pred HHHHHHHcCCC--CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc--------c-------CCCeEEEEccccC
Confidence 35666655442 45679999999999999999988 4699999999751 1 2589999999765
Q ss_pred HH-----hh-CC---CCCeeEEEEcCCCCCCCc---cc----cchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHH
Q 016578 226 FL-----RQ-VP---RGKYDAIIVDSSDPVGPA---QE----LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMI 289 (387)
Q Consensus 226 ~l-----~~-~~---~~~fDvII~D~~dp~~~~---~~----L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~ 289 (387)
.- .+ .. .++||+|++|........ .. -.....++.+.+.|+|||.|++.. + .......+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~---~-~~~~~~~~~ 149 (191)
T 3dou_A 74 ETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ---F-QGDMTNDFI 149 (191)
T ss_dssp SSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE---E-CSTHHHHHH
T ss_pred HHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE---c-CCCCHHHHH
Confidence 21 11 11 148999999975332211 10 012356788899999999998643 2 223345677
Q ss_pred HHHHHHcCCCcceEEEEeec--cCCCcEEEEEEec
Q 016578 290 SICRETFKGSVHYAWASVPT--YPSGIIGFLICST 322 (387)
Q Consensus 290 ~~l~~~F~~~v~~~~~~iPt--yp~g~~gf~~ask 322 (387)
+.++..|. .|.. .-|. -+...--|++|..
T Consensus 150 ~~l~~~F~-~v~~---~kP~asR~~s~E~y~v~~~ 180 (191)
T 3dou_A 150 AIWRKNFS-SYKI---SKPPASRGSSSEIYIMFFG 180 (191)
T ss_dssp HHHGGGEE-EEEE---ECC------CCEEEEEEEE
T ss_pred HHHHHhcC-EEEE---ECCCCccCCCceEEEEEee
Confidence 77888887 3332 2232 2222445777754
No 177
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.10 E-value=4.2e-10 Score=96.99 Aligned_cols=130 Identities=17% Similarity=0.218 Sum_probs=88.1
Q ss_pred HHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 147 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 147 ~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
.+++..... .....+|||+|||+|..+..+++. ++..+++++|+++ +++. ++++++.+|+.+
T Consensus 11 ~~~~~~~~~--~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~d~~~ 73 (180)
T 1ej0_A 11 DEIQQSDKL--FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQGDFRD 73 (180)
T ss_dssp HHHHHHHCC--CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEESCTTS
T ss_pred HHHHHHhCC--CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEccccc
Confidence 344444332 245669999999999999999987 4457999999999 5421 478999999876
Q ss_pred HH-----hh-CCCCCeeEEEEcCCCCCCCcccc-------chHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHH
Q 016578 226 FL-----RQ-VPRGKYDAIIVDSSDPVGPAQEL-------VEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISIC 292 (387)
Q Consensus 226 ~l-----~~-~~~~~fDvII~D~~dp~~~~~~L-------~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l 292 (387)
.- .. .++++||+|+++.+......... ....+++.+.+.|+|||.+++.... ......+.+.+
T Consensus 74 ~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~~ 149 (180)
T 1ej0_A 74 ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ----GEGFDEYLREI 149 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES----STTHHHHHHHH
T ss_pred chhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec----CCcHHHHHHHH
Confidence 52 11 23468999999876433221100 0157899999999999999874321 12234556666
Q ss_pred HHHcC
Q 016578 293 RETFK 297 (387)
Q Consensus 293 ~~~F~ 297 (387)
+..|.
T Consensus 150 ~~~~~ 154 (180)
T 1ej0_A 150 RSLFT 154 (180)
T ss_dssp HHHEE
T ss_pred HHhhh
Confidence 66675
No 178
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.09 E-value=4.6e-11 Score=111.40 Aligned_cols=82 Identities=11% Similarity=0.116 Sum_probs=64.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh-HHhhCC---CCCe
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVP---RGKY 235 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~-~l~~~~---~~~f 235 (387)
++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++... ++ ..+++++.+|+.+ ++...+ +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN--NL-SDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--CC-CccEEEEEcchhhhhhhhhhcccCCcc
Confidence 467999999999999999887644479999999999999999998654 22 3479999999766 232222 2589
Q ss_pred eEEEEcCCC
Q 016578 236 DAIIVDSSD 244 (387)
Q Consensus 236 DvII~D~~d 244 (387)
|+|+++++.
T Consensus 142 D~i~~npp~ 150 (254)
T 2h00_A 142 DFCMCNPPF 150 (254)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCC
Confidence 999998654
No 179
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.08 E-value=3.1e-10 Score=102.26 Aligned_cols=98 Identities=18% Similarity=0.218 Sum_probs=77.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
++.+|||||||+|..+..+ +..+|+++|+++.+++.+++++ ++++++.+|+.+.. .++++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEALP--FPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSCC--SCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccCC--CCCCcEEEEE
Confidence 6679999999999999887 2348999999999999999986 36788999987642 2356899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+.......+ ....+++.++++|+|||.+++...
T Consensus 101 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 101 LFTTLEFVE----DVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp EESCTTTCS----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcChhhhcC----CHHHHHHHHHHHcCCCCEEEEEec
Confidence 875433222 135689999999999999987543
No 180
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.08 E-value=6.6e-10 Score=99.64 Aligned_cols=97 Identities=20% Similarity=0.228 Sum_probs=74.5
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 158 IPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
..++.+|||+|||+|.++..+++. +..+|++||+|+.+++.+++++. +++++.+|+.++ +++||+
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~-----~~~~D~ 113 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI-----SGKYDT 113 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC-----CCCEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC-----CCCeeE
Confidence 346779999999999999999987 45689999999999999999863 689999998774 258999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
|++|.+...... -....+++.+.+.| |+++++
T Consensus 114 v~~~~p~~~~~~--~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 114 WIMNPPFGSVVK--HSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp EEECCCC---------CHHHHHHHHHHE--EEEEEE
T ss_pred EEECCCchhccC--chhHHHHHHHHHhc--CcEEEE
Confidence 999876433221 12356899999988 555554
No 181
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.08 E-value=2.4e-10 Score=107.59 Aligned_cols=106 Identities=9% Similarity=0.137 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
++..+|||||||+|.++..+++..+..+|+++|+|+..++.|++++... ++ ..+++++.+|+.+.+.. .++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl-~~~I~v~~gD~l~~~~~--~~~~D~I 94 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS--GL-TEQIDVRKGNGLAVIEK--KDAIDTI 94 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TC-TTTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CceEEEEecchhhccCc--cccccEE
Confidence 4567999999999999999999877789999999999999999998765 23 34899999999887642 2369998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.- .... .-.+++....+.|+++|.|++|.
T Consensus 95 viag-----mGg~-lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 95 VIAG-----MGGT-LIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp EEEE-----ECHH-HHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EEeC-----CchH-HHHHHHHHHHHHhCCCCEEEEEc
Confidence 8621 1111 13458888999999999999875
No 182
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.08 E-value=1.5e-10 Score=111.47 Aligned_cols=116 Identities=15% Similarity=0.162 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCC---CCCCCEEEEEcchhhHHh--hC--C
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG---FEDPRVRLHIGDAVEFLR--QV--P 231 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~---~~d~rv~v~~gD~~~~l~--~~--~ 231 (387)
+++.+|||||||+|..+..+++.+ ..+|+++|+++.+++.+++.+...... ....+++++.+|+.+... .. +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 467799999999999999998863 579999999999999999987643100 012479999999877520 11 2
Q ss_pred CCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 232 RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 232 ~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+++||+|++...-++.....-....+++.++++|+|||++++..
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 35899999865433320010112468999999999999999754
No 183
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.07 E-value=2.2e-10 Score=107.28 Aligned_cols=103 Identities=18% Similarity=0.315 Sum_probs=79.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++.. .+|+++|+|+.+++.+++... .+ ++.+|+.+.. .++++||+|
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~--------~~--~~~~d~~~~~--~~~~~fD~v 118 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERG--FEVVLVDPSKEMLEVAREKGV--------KN--VVEAKAEDLP--FPSGAFEAV 118 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHHTC--------SC--EEECCTTSCC--SCTTCEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcC--CeEEEEeCCHHHHHHHHhhcC--------CC--EEECcHHHCC--CCCCCEEEE
Confidence 467799999999999999999874 589999999999999998753 12 7888876642 235689999
Q ss_pred EEcCCC-CCCCccccchHHHHHHHHHhccCCCeEEecccccc
Q 016578 239 IVDSSD-PVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMW 279 (387)
Q Consensus 239 I~D~~d-p~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~ 279 (387)
++...- ...+ + ...+++.+++.|+|||++++...+.+
T Consensus 119 ~~~~~~~~~~~-~---~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 119 LALGDVLSYVE-N---KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp EECSSHHHHCS-C---HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred EEcchhhhccc-c---HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 975321 1111 1 45689999999999999998665543
No 184
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.07 E-value=6.5e-10 Score=103.87 Aligned_cols=112 Identities=16% Similarity=0.080 Sum_probs=77.3
Q ss_pred HhccccCCCCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHh-
Q 016578 151 AHLPLCSIPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR- 228 (387)
Q Consensus 151 ~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~- 228 (387)
..+..+...+..+|||||||+|+.+..+++. .+..+|++||+++.+++...+.... .++++++.+|+.....
T Consensus 67 ~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~ 140 (232)
T 3id6_C 67 KGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSY 140 (232)
T ss_dssp TTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGT
T ss_pred hhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhh
Confidence 3343333455679999999999999999876 3456999999999886544332221 2479999999875321
Q ss_pred hCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 229 QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 229 ~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
....++||+|++|.+.+.. ..-+.+.+.+.|||||.|++.
T Consensus 141 ~~~~~~~D~I~~d~a~~~~------~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 141 KSVVENVDVLYVDIAQPDQ------TDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp TTTCCCEEEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred hccccceEEEEecCCChhH------HHHHHHHHHHhCCCCeEEEEE
Confidence 1113589999999765321 122445666699999999864
No 185
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.07 E-value=2.9e-10 Score=106.10 Aligned_cols=106 Identities=11% Similarity=0.125 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
++..+|||||||+|.++..+++..+..+|+++|+|+..++.|++++... ++ ..+++++.+|+.+.+.. .++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~--gl-~~~I~~~~gD~l~~~~~--~~~~D~I 94 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH--GL-TSKIDVRLANGLSAFEE--ADNIDTI 94 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT--TC-TTTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEECchhhcccc--ccccCEE
Confidence 4567999999999999999999877789999999999999999998765 23 34899999999887642 2379998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.. .... .-.+++....+.|+++|.|++|.
T Consensus 95 viaG-----mGg~-lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 95 TICG-----MGGR-LIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp EEEE-----ECHH-HHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EEeC-----CchH-HHHHHHHHHHHHhCcCCEEEEEC
Confidence 8532 1111 13458888899999999999875
No 186
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.07 E-value=6e-10 Score=98.13 Aligned_cols=96 Identities=13% Similarity=0.216 Sum_probs=73.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
++.+|||||||+|.++..+++.. +|++||+|+.+++. .++++++.+|+.+.+. +++||+|+
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------------~~~~~~~~~d~~~~~~---~~~fD~i~ 83 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------------HRGGNLVRADLLCSIN---QESVDVVV 83 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------------CSSSCEEECSTTTTBC---GGGCSEEE
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------------ccCCeEEECChhhhcc---cCCCCEEE
Confidence 45699999999999999999875 99999999999987 1468899999887432 36899999
Q ss_pred EcCCCCCCCcc-----ccchHHHHHHHHHhccCCCeEEecc
Q 016578 240 VDSSDPVGPAQ-----ELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 240 ~D~~dp~~~~~-----~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++.+....+.. ..-..++++.+.+.| |||++++..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 97654321111 001235788888888 999998643
No 187
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.07 E-value=1e-10 Score=108.27 Aligned_cols=110 Identities=13% Similarity=0.026 Sum_probs=79.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCC-HHHHHHH---HhhcccccCCCCCCCEEEEEcchhhHHhhCCCCC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEID-KMVIDVS---KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK 234 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD-~~vi~~a---r~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~ 234 (387)
..+.+|||||||+|..+..+++..+..+|++||++ +.+++.| +++.... .-++++++.+|+.++.... .+.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~----~~~~v~~~~~d~~~l~~~~-~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG----GLSNVVFVIAAAESLPFEL-KNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT----CCSSEEEECCBTTBCCGGG-TTC
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc----CCCCeEEEEcCHHHhhhhc-cCe
Confidence 35669999999999999999976567899999999 7777776 6665433 1257999999988762222 256
Q ss_pred eeEEEEcCCCCCCC-ccccchHHHHHHHHHhccCCCeEEe
Q 016578 235 YDAIIVDSSDPVGP-AQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 235 fDvII~D~~dp~~~-~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
+|.|.+..+.+... .......++++.++++|||||.+++
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 77777765432110 0001134689999999999999987
No 188
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.07 E-value=1.7e-10 Score=104.80 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=82.0
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
.|.....++ +.+.+|||||||+|.++..++...+..+|+++|+|+.+++++++++..... .+ ++++ .|..
T Consensus 39 fY~~~~~~l-----~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~--~~-~v~~--~d~~ 108 (200)
T 3fzg_A 39 FYTYVFGNI-----KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT--TI-KYRF--LNKE 108 (200)
T ss_dssp HHHHHHHHS-----CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC--SS-EEEE--ECCH
T ss_pred HHHHHHhhc-----CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC--Cc-cEEE--eccc
Confidence 378877776 558899999999999999998876667999999999999999999876421 11 4555 6655
Q ss_pred hHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 225 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 225 ~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
... +.+.||+|+.-..-|.-. + .+.....+.++|+|||++|.
T Consensus 109 ~~~---~~~~~DvVLa~k~LHlL~-~---~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 109 SDV---YKGTYDVVFLLKMLPVLK-Q---QDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp HHH---TTSEEEEEEEETCHHHHH-H---TTCCHHHHHHTCEEEEEEEE
T ss_pred ccC---CCCCcChhhHhhHHHhhh-h---hHHHHHHHHHHhCCCCEEEE
Confidence 432 356899999754432211 0 00123489999999999985
No 189
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.07 E-value=3.6e-10 Score=107.17 Aligned_cols=148 Identities=18% Similarity=0.188 Sum_probs=98.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhc-------CC-----CceEEEEeCCH---HHH-----------HHHHhhcccccC----
Q 016578 160 SPKTVLVVGGGDGGVLREISRH-------DS-----VELIDICEIDK---MVI-----------DVSKKYFPELAV---- 209 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~-------~~-----~~~Vt~VEiD~---~vi-----------~~ar~~~~~~~~---- 209 (387)
++.+||+||+|+|..+..+++. .+ ..+++.+|.+| +.+ +.+++.+..+..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999999886653 33 25899999987 333 355554432110
Q ss_pred ----CCCC--CCEEEEEcchhhHHhhCCC---CCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccch
Q 016578 210 ----GFED--PRVRLHIGDAVEFLRQVPR---GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWL 280 (387)
Q Consensus 210 ----~~~d--~rv~v~~gD~~~~l~~~~~---~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~ 280 (387)
.+++ .+++++.+|+.+.+....+ ..||+|+.|.+.|...+ .+++.++|+.++++|+|||+|++.+..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p-~lw~~~~l~~l~~~L~pGG~l~tysaa--- 215 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNP-DMWTQNLFNAMARLARPGGTLATFTSA--- 215 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCG-GGCCHHHHHHHHHHEEEEEEEEESCCB---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccCh-hhcCHHHHHHHHHHcCCCcEEEEEeCC---
Confidence 1222 4678999999998876532 27999999987665433 688999999999999999999974422
Q ss_pred hhhHHHHHHHHHHHH-cCCCcceEEEEeeccCCCcEEEEEEecC
Q 016578 281 HTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIGFLICSTE 323 (387)
Q Consensus 281 ~~~~~~~~~~~l~~~-F~~~v~~~~~~iPtyp~g~~gf~~ask~ 323 (387)
. .+.+.++.. |. ...+|.++ +-...+.+.++
T Consensus 216 --~---~vrr~L~~aGF~------v~~~~g~~-~kr~m~~a~~~ 247 (257)
T 2qy6_A 216 --G---FVRRGLQEAGFT------MQKRKGFG-RKREMLCGVME 247 (257)
T ss_dssp --H---HHHHHHHHHTEE------EEEECCST-TCCCEEEEEEC
T ss_pred --H---HHHHHHHHCCCE------EEeCCCCC-CCCceEEEEec
Confidence 1 233444444 43 23556664 23445555543
No 190
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.07 E-value=3.8e-10 Score=110.12 Aligned_cols=109 Identities=20% Similarity=0.212 Sum_probs=81.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++++|||||||+|.++..+++.+ ..+|++||++ .+++.|++.+... ++ .++++++.+|+.+.. .+.++||+|
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~~--~~~~~~D~I 109 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELN--GF-SDKITLLRGKLEDVH--LPFPKVDII 109 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHT--TC-TTTEEEEESCTTTSC--CSSSCEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHc--CC-CCCEEEEECchhhcc--CCCCcccEE
Confidence 356799999999999999999874 5699999999 5899999987654 22 358999999987752 234689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+++......... .....++..+.+.|+|||+++...
T Consensus 110 vs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~li~~~ 145 (328)
T 1g6q_1 110 ISEWMGYFLLYE-SMMDTVLYARDHYLVEGGLIFPDK 145 (328)
T ss_dssp EECCCBTTBSTT-CCHHHHHHHHHHHEEEEEEEESCE
T ss_pred EEeCchhhcccH-HHHHHHHHHHHhhcCCCeEEEEee
Confidence 987542211111 113458889999999999998543
No 191
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.07 E-value=4e-10 Score=101.88 Aligned_cols=101 Identities=14% Similarity=0.136 Sum_probs=78.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++. + .+++++|+++.+++.+++.+. +++.+|+.++....++++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcCCCCCCCccCEE
Confidence 46679999999999999999988 4 799999999999999988652 5778887654222335689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
++.......+. ...+++.+++.|+|||.+++...
T Consensus 98 ~~~~~l~~~~~----~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 98 IFGDVLEHLFD----PWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp EEESCGGGSSC----HHHHHHHTGGGEEEEEEEEEEEE
T ss_pred EECChhhhcCC----HHHHHHHHHHHcCCCCEEEEEeC
Confidence 97643211111 24689999999999999987553
No 192
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.06 E-value=6.2e-10 Score=108.16 Aligned_cols=114 Identities=16% Similarity=0.250 Sum_probs=86.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
....+|||+|||+|+.+..+++.. +..+|+++|+|+.+++.+++++.... -++++++.+|+.++.. . .++||+
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g----~~~v~~~~~D~~~~~~-~-~~~fD~ 190 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG----VLNVILFHSSSLHIGE-L-NVEFDK 190 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT----CCSEEEESSCGGGGGG-G-CCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC----CCeEEEEECChhhccc-c-cccCCE
Confidence 456799999999999999999863 34699999999999999999987652 2479999999988653 2 458999
Q ss_pred EEEcCCCC-CCC----ccc-------------cchHHHHHHHHHhccCCCeEEeccccc
Q 016578 238 IIVDSSDP-VGP----AQE-------------LVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 238 II~D~~dp-~~~----~~~-------------L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
|++|.+-. .+. ++. -.+.++++.+.+.|+|||+++..+.+.
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 99996521 111 100 012578999999999999998765443
No 193
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.06 E-value=4.8e-10 Score=110.66 Aligned_cols=109 Identities=14% Similarity=0.167 Sum_probs=83.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..+.+|||||||+|..+..+++..+..+++++|+ +.+++.|++++.... + .++++++.+|.++.-... ++.||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~-p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS--G-SERIHGHGANLLDRDVPF-PTGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT--T-GGGEEEEECCCCSSSCCC-CCCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC--c-ccceEEEEccccccCCCC-CCCcCEE
Confidence 4678999999999999999998766779999999 999999999876541 1 258999999986530012 2579999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++...-...+.. ....+++.++++|+|||.+++.
T Consensus 253 ~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 253 WMSQFLDCFSEE--EVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp EEESCSTTSCHH--HHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEechhhhCCHH--HHHHHHHHHHHhcCCCcEEEEE
Confidence 976543322211 1246899999999999988763
No 194
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.06 E-value=6.7e-10 Score=109.21 Aligned_cols=109 Identities=17% Similarity=0.121 Sum_probs=81.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++++|||||||+|.++..+++.+ ..+|++||+++ +++.|++.+... ++ .++++++.+|..++- . +++||+|
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~--~l-~~~v~~~~~d~~~~~--~-~~~~D~I 120 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSN--NL-TDRIVVIPGKVEEVS--L-PEQVDII 120 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTCC--C-SSCEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHc--CC-CCcEEEEEcchhhCC--C-CCceeEE
Confidence 356799999999999999999874 57999999997 789999887644 22 358999999987642 2 3589999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
+++......... ...+.+..+++.|+|||+++.+..+
T Consensus 121 vs~~~~~~~~~~--~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 121 ISEPMGYMLFNE--RMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp EECCCBTTBTTT--SHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred EEeCchhcCChH--HHHHHHHHHHhhcCCCeEEEEecCc
Confidence 987542211111 1235777889999999999865433
No 195
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.05 E-value=6.5e-10 Score=99.34 Aligned_cols=120 Identities=16% Similarity=0.142 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC--CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHH---------
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS--VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL--------- 227 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~--~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l--------- 227 (387)
++..+|||||||+|..+..+++..+ ..+|+++|+++.. ..++++++.+|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------------CCCCceEEEccccchhhhhhccccc
Confidence 4557999999999999999998754 5799999999831 1246888899886542
Q ss_pred --------------hhCCCCCeeEEEEcCCCCCCCc--cccc-----hHHHHHHHHHhccCCCeEEecccccchhhhHHH
Q 016578 228 --------------RQVPRGKYDAIIVDSSDPVGPA--QELV-----EKPFFDTIAKALRPGGVLCNMAESMWLHTHLIE 286 (387)
Q Consensus 228 --------------~~~~~~~fDvII~D~~dp~~~~--~~L~-----~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~ 286 (387)
...++++||+|+++...+.... .... ...+++.+.+.|+|||.|++.. +. .....
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~---~~-~~~~~ 161 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM---YL-GSQTN 161 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE---EC-STTHH
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE---eC-CCCHH
Confidence 0023468999999875433210 0000 1247888999999999998743 11 22345
Q ss_pred HHHHHHHHHcC
Q 016578 287 DMISICRETFK 297 (387)
Q Consensus 287 ~~~~~l~~~F~ 297 (387)
.+...++..|.
T Consensus 162 ~l~~~l~~~f~ 172 (201)
T 2plw_A 162 NLKTYLKGMFQ 172 (201)
T ss_dssp HHHHHHHTTEE
T ss_pred HHHHHHHHHHh
Confidence 56666666665
No 196
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.05 E-value=3.3e-10 Score=113.07 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=81.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
+.+.|||||||+|.++..+++.+ ..+|++||.++ +++.|++.+..+ ++ ..+|+++.+|..+. +. +++||+||
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n--~~-~~~i~~i~~~~~~~--~l-pe~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFN--GL-EDRVHVLPGPVETV--EL-PEQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHT--TC-TTTEEEEESCTTTC--CC-SSCEEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHc--CC-CceEEEEeeeeeee--cC-CccccEEE
Confidence 56799999999999999988875 57999999997 789999887654 33 35899999998775 23 46899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+...+.....+. .-..++....+.|+|||+++-...
T Consensus 155 sE~~~~~l~~e~-~l~~~l~a~~r~Lkp~G~~iP~~a 190 (376)
T 4hc4_A 155 SEWMGYGLLHES-MLSSVLHARTKWLKEGGLLLPASA 190 (376)
T ss_dssp CCCCBTTBTTTC-SHHHHHHHHHHHEEEEEEEESCEE
T ss_pred eecccccccccc-hhhhHHHHHHhhCCCCceECCccc
Confidence 765543222222 234577788899999999985443
No 197
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.05 E-value=5.5e-10 Score=104.70 Aligned_cols=119 Identities=9% Similarity=0.090 Sum_probs=82.3
Q ss_pred HHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHH------HHHHHHhhcccccCCCCCCCEEEE
Q 016578 147 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKM------VIDVSKKYFPELAVGFEDPRVRLH 219 (387)
Q Consensus 147 ~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~------vi~~ar~~~~~~~~~~~d~rv~v~ 219 (387)
..++..+. .++..+|||||||+|..+..+++. ++..+|+++|+++. +++.+++++.... + .++++++
T Consensus 33 ~~l~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~--~-~~~v~~~ 106 (275)
T 3bkx_A 33 LAIAEAWQ---VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP--L-GDRLTVH 106 (275)
T ss_dssp HHHHHHHT---CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST--T-GGGEEEE
T ss_pred HHHHHHcC---CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC--C-CCceEEE
Confidence 44444443 256679999999999999999987 35579999999997 8999999876431 1 2589999
Q ss_pred Ecc-hhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 220 IGD-AVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 220 ~gD-~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.+| ....-...++++||+|++.......+. ...+.+.+++.++|||.+++..
T Consensus 107 ~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 107 FNTNLSDDLGPIADQHFDRVVLAHSLWYFAS----ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp CSCCTTTCCGGGTTCCCSEEEEESCGGGSSC----HHHHHHHHHHHTTTCSEEEEEE
T ss_pred ECChhhhccCCCCCCCEEEEEEccchhhCCC----HHHHHHHHHHHhCCCCEEEEEE
Confidence 998 221111123568999997654322211 1236677777777799988753
No 198
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.05 E-value=3.3e-09 Score=104.88 Aligned_cols=106 Identities=17% Similarity=0.210 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.+++++.... + .++++++.+|.++ ..+. .||+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--l-~~~v~~~~~d~~~---~~p~-~~D~v 272 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG--L-ADRCEILPGDFFE---TIPD-GADVY 272 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--C-TTTEEEEECCTTT---CCCS-SCSEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC--c-CCceEEeccCCCC---CCCC-CceEE
Confidence 5678999999999999999999877779999999 999999999876542 2 3589999999873 2333 79999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++...-...+.. ....+++.++++|+|||.+++.
T Consensus 273 ~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 273 LIKHVLHDWDDD--DVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEE
T ss_pred EhhhhhccCCHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 976543222211 1235899999999999998864
No 199
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.04 E-value=9.1e-10 Score=104.62 Aligned_cols=105 Identities=11% Similarity=0.157 Sum_probs=74.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh-HHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~-~l~~~~~~~fDv 237 (387)
++..+|||||||+|.++..+++.. .+|++||+|+.+++.|++++... .+.....|... ..... +++||+
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~-~~~fD~ 113 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKEL-AGHFDF 113 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGG-TTCCSE
T ss_pred CCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHhc-------cceeeeeeccccccccc-CCCccE
Confidence 566799999999999999999874 68999999999999999987532 23333333211 00111 468999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
|+++..-...+... ...+++.+.++| |||+++++..
T Consensus 114 Vv~~~~l~~~~~~~--~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 114 VLNDRLINRFTTEE--ARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp EEEESCGGGSCHHH--HHHHHHHHHHHH-TTSEEEEEEE
T ss_pred EEEhhhhHhCCHHH--HHHHHHHHHHhC-cCcEEEEEec
Confidence 99875432111111 345899999999 9999997654
No 200
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.04 E-value=7.5e-10 Score=112.32 Aligned_cols=108 Identities=17% Similarity=0.200 Sum_probs=79.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHH-------HhhcccccCCCCCCCEEEEEcchhh---HHh
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVS-------KKYFPELAVGFEDPRVRLHIGDAVE---FLR 228 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~a-------r~~~~~~~~~~~d~rv~v~~gD~~~---~l~ 228 (387)
....+|||||||+|.++..+++..+..+|++||+++.+++.| ++++... ++.-.+++++.+|... .+.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~--Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLY--GMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHT--TBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHc--CCCCCceEEEEcCccccccccc
Confidence 466799999999999999999875556899999999999999 7766543 2222589999987652 121
Q ss_pred hCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 229 QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 229 ~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
.. .+.||+|+++..- ..+ . ....++.+.+.|+|||.+++.
T Consensus 319 ~~-~~~FDvIvvn~~l-~~~--d--~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 EL-IPQCDVILVNNFL-FDE--D--LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HH-GGGCSEEEECCTT-CCH--H--HHHHHHHHHTTCCTTCEEEES
T ss_pred cc-cCCCCEEEEeCcc-ccc--c--HHHHHHHHHHhCCCCeEEEEe
Confidence 11 2579999986432 111 1 235688999999999999874
No 201
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.03 E-value=6.8e-10 Score=104.04 Aligned_cols=98 Identities=16% Similarity=0.232 Sum_probs=76.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.+++. ++++++.+|+.++. .++++||+|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~----------~~~~~~~~d~~~~~--~~~~~fD~v 98 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ--GLFVYAVEPSIVMRQQAVVH----------PQVEWFTGYAENLA--LPDKSVDGV 98 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT--TCEEEEECSCHHHHHSSCCC----------TTEEEECCCTTSCC--SCTTCBSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhc----------cCCEEEECchhhCC--CCCCCEeEE
Confidence 56789999999999999999984 46999999999998877654 27999999987642 335789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++...-...+ -...+++.++++|+ ||.+++..
T Consensus 99 ~~~~~l~~~~----~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 99 ISILAIHHFS----HLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EEESCGGGCS----SHHHHHHHHHHHBC-SSCEEEEE
T ss_pred EEcchHhhcc----CHHHHHHHHHHHhC-CcEEEEEE
Confidence 9865432211 13468999999999 99766543
No 202
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.01 E-value=5.6e-10 Score=101.31 Aligned_cols=113 Identities=17% Similarity=0.089 Sum_probs=75.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+..+|||||||+|..+..+++..+..+|++||+++.+++.+.+..........-++++++.+|+.+.- ..++. |.|
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~--~~~~~-d~v 102 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP--PLSGV-GEL 102 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC--SCCCE-EEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC--CCCCC-CEE
Confidence 456799999999999999999987678999999999988753222111100012358999999988742 22344 777
Q ss_pred EEcCCCCCCCccc-cchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQE-LVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~-L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++..+........ --...+++.++++|||||++++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 7544311000000 00146899999999999999874
No 203
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.01 E-value=1.3e-09 Score=105.88 Aligned_cols=106 Identities=16% Similarity=0.244 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.+++++.... + .++++++.+|.++ ..+. .||+|
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~---~~p~-~~D~v 239 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG--L-SGRAQVVVGSFFD---PLPA-GAGGY 239 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--C-TTTEEEEECCTTS---CCCC-SCSEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC--c-CcCeEEecCCCCC---CCCC-CCcEE
Confidence 4467999999999999999998766779999999 999999999876542 1 3689999999863 2333 79999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++...-...+.. ....+++.++++|+|||.+++.
T Consensus 240 ~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 240 VLSAVLHDWDDL--SAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHHTTTCEEEEE
T ss_pred EEehhhccCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 976443222211 1256899999999999998764
No 204
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.01 E-value=9.3e-10 Score=107.45 Aligned_cols=107 Identities=19% Similarity=0.276 Sum_probs=82.5
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++.... + .++++++.+|..+.... ..+.||+|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~-~~~~~D~v~~ 254 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD--L-GGRVEFFEKNLLDARNF-EGGAADVVML 254 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--C-GGGEEEEECCTTCGGGG-TTCCEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC--C-CCceEEEeCCcccCccc-CCCCccEEEE
Confidence 78999999999999999999876789999999 889999999876542 1 35899999998765311 2456999997
Q ss_pred cCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 241 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 241 D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
...-+..+.. ....+++.++++|+|||.+++.
T Consensus 255 ~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 255 NDCLHYFDAR--EAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp ESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEE
T ss_pred ecccccCCHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 5443222211 1256899999999999988763
No 205
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.00 E-value=1e-09 Score=104.62 Aligned_cols=111 Identities=16% Similarity=0.150 Sum_probs=74.3
Q ss_pred CCCEEEEEcCcccHHHHHH----HhcCCCceE--EEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh----
Q 016578 160 SPKTVLVVGGGDGGVLREI----SRHDSVELI--DICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ---- 229 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el----~k~~~~~~V--t~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~---- 229 (387)
++.+|||||||+|.++..+ +...+..+| ++||+++++++.|++.+.... ++.+-++.+..+|+.++...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS-NLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS-SCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc-CCCcceEEEEecchhhhhhhhccc
Confidence 3459999999999766543 332223344 999999999999999864320 11222345566777665421
Q ss_pred CCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 230 VPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 230 ~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.++++||+|++...-...+. ...+++.++++|||||++++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 23568999997654433221 2458999999999999998753
No 206
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.00 E-value=5e-10 Score=104.95 Aligned_cols=95 Identities=20% Similarity=0.293 Sum_probs=76.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..+.+|||||||+|..+..+++..+..+|+++|+++.+++.+++.. ++++++.+|+.+.. ..+++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRLP--FSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSCS--BCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhCC--CCCCceeEE
Confidence 4567999999999999999998754569999999999999999875 36789999986531 235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++... + .+++.+.++|+|||++++..
T Consensus 153 ~~~~~----~-------~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 153 IRIYA----P-------CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp EEESC----C-------CCHHHHHHHEEEEEEEEEEE
T ss_pred EEeCC----h-------hhHHHHHHhcCCCcEEEEEE
Confidence 96432 1 25889999999999998754
No 207
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.99 E-value=1e-09 Score=109.61 Aligned_cols=104 Identities=17% Similarity=0.165 Sum_probs=84.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccC-------------CCCCCCEEEEEcchhhH
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-------------GFEDPRVRLHIGDAVEF 226 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~-------------~~~d~rv~v~~gD~~~~ 226 (387)
.+.+|||+|||+|..+..+++..+..+|+++|+|+..++.+++++..+.. +++ +++++.+|+.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~--~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK--TIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS--EEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC--ceEEEcCcHHHH
Confidence 56799999999999999999874456899999999999999999865510 222 399999999998
Q ss_pred HhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 227 LRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 227 l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+... .++||+|++|++. . ..+|++.+.+.|++||++++.
T Consensus 125 ~~~~-~~~fD~I~lDP~~---~-----~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 125 MAER-HRYFHFIDLDPFG---S-----PMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHHS-TTCEEEEEECCSS---C-----CHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhc-cCCCCEEEeCCCC---C-----HHHHHHHHHHhcCCCCEEEEE
Confidence 8754 4579999988642 1 246899999999999988753
No 208
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.99 E-value=1.5e-09 Score=106.83 Aligned_cols=106 Identities=25% Similarity=0.351 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++... ++ ..+++++.+|..+.+ + ..||+|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~---~-~~~D~v 252 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA--GL-ADRVTVAEGDFFKPL---P-VTADVV 252 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC---S-CCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--CC-CCceEEEeCCCCCcC---C-CCCCEE
Confidence 4567999999999999999998866679999999 99999999987654 22 348999999987532 2 349999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++...-...+.. ....+++.++++|+|||.+++.
T Consensus 253 ~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 286 (374)
T 1qzz_A 253 LLSFVLLNWSDE--DALTILRGCVRALEPGGRLLVL 286 (374)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeccccCCCHH--HHHHHHHHHHHhcCCCcEEEEE
Confidence 976543221111 1236899999999999987753
No 209
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.99 E-value=1.4e-09 Score=105.39 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=80.8
Q ss_pred CEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEc
Q 016578 162 KTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVD 241 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D 241 (387)
.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++..... .++++++.+|..+. . ++.||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~---~-~~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA---GERVSLVGGDMLQE---V-PSNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH---TTSEEEEESCTTTC---C-CSSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC---CCcEEEecCCCCCC---C-CCCCCEEEEc
Confidence 8999999999999999998766679999999 9999999998764321 35899999998762 2 3579999976
Q ss_pred CCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 242 SSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 242 ~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
..-+..+.. ....+++.++++|+|||.+++.
T Consensus 241 ~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 241 RIIGDLDEA--ASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp SCGGGCCHH--HHHHHHHHHHHHSCTTCEEEEE
T ss_pred hhccCCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 543222211 1246899999999999988764
No 210
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.98 E-value=2.5e-09 Score=109.37 Aligned_cols=114 Identities=16% Similarity=0.231 Sum_probs=87.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
..+.+|||+|||+|+.+..+++.. +..+|+++|+|+..++.+++++.... + . ++++.+|+.++.... .++||+
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G--~--~-v~~~~~Da~~l~~~~-~~~FD~ 173 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG--A--P-LAVTQAPPRALAEAF-GTYFHR 173 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC--C--C-CEEECSCHHHHHHHH-CSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C--e-EEEEECCHHHhhhhc-cccCCE
Confidence 456799999999999999999763 33689999999999999999987662 2 3 899999999876433 468999
Q ss_pred EEEcCCCC-CCC----ccc-------------cchHHHHHHHHHhccCCCeEEeccccc
Q 016578 238 IIVDSSDP-VGP----AQE-------------LVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 238 II~D~~dp-~~~----~~~-------------L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
|++|++-. .+. ++. -.+.++++.+.+.|+|||+|+..+.+.
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 99997641 110 111 023678999999999999999765543
No 211
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.98 E-value=1.6e-10 Score=107.25 Aligned_cols=115 Identities=11% Similarity=0.093 Sum_probs=80.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCC-------------------------C
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE-------------------------D 213 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~-------------------------d 213 (387)
.++.+|||||||+|..+..+++... .+|+++|+++.+++.+++++......++ .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3456999999999999999888753 6999999999999999998754210000 0
Q ss_pred CCE-EEEEcchhhHHh--hCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 214 PRV-RLHIGDAVEFLR--QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 214 ~rv-~v~~gD~~~~l~--~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
.++ +++.+|+.+... ....++||+|++...-...+...--...+++.++++|+|||++++.
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 197 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMV 197 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Confidence 127 899999876432 1112689999976432100001001346899999999999998864
No 212
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.98 E-value=1e-10 Score=110.14 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=76.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCC-------------------------CC
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE-------------------------DP 214 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~-------------------------d~ 214 (387)
+..+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++.....+++ ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 45689999999998777666553 46899999999999999987643211111 01
Q ss_pred CEE-EEEcchhhHHh--hCCCCCeeEEEEcCCCCC-CCccccchHHHHHHHHHhccCCCeEEec
Q 016578 215 RVR-LHIGDAVEFLR--QVPRGKYDAIIVDSSDPV-GPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 215 rv~-v~~gD~~~~l~--~~~~~~fDvII~D~~dp~-~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+++ ++.+|..+... ....++||+|++...... .+... -....++.++++|||||+|++.
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~-~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLD-AYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHH-HHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHH-HHHHHHHHHHHHcCCCcEEEEE
Confidence 344 88999876311 112458999997654221 11000 0235789999999999999875
No 213
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.97 E-value=2.7e-09 Score=94.74 Aligned_cols=120 Identities=13% Similarity=0.130 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCC---------ceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEE-EcchhhHHh
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSV---------ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH-IGDAVEFLR 228 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~---------~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~-~gD~~~~l~ 228 (387)
....+|||||||+|..+..+++..+. .+|+++|+++.. ..++++++ .+|......
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------------cCCCCeEEEeccCCCHHH
Confidence 45679999999999999999988433 689999999831 02467888 888654311
Q ss_pred ------hCCCCCeeEEEEcCCCCC-CCc--ccc----chHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH
Q 016578 229 ------QVPRGKYDAIIVDSSDPV-GPA--QEL----VEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 295 (387)
Q Consensus 229 ------~~~~~~fDvII~D~~dp~-~~~--~~L----~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~ 295 (387)
..++++||+|+++..... +.. +.. ....+++.+.+.|+|||.+++.... ......+...++..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~~ 161 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA----GSQSRRLQRRLTEE 161 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC----SGGGHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC----CccHHHHHHHHHHH
Confidence 122357999999864322 110 000 0136889999999999999875322 12234566667777
Q ss_pred cC
Q 016578 296 FK 297 (387)
Q Consensus 296 F~ 297 (387)
|.
T Consensus 162 f~ 163 (196)
T 2nyu_A 162 FQ 163 (196)
T ss_dssp EE
T ss_pred hc
Confidence 76
No 214
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.97 E-value=1.2e-09 Score=109.50 Aligned_cols=104 Identities=23% Similarity=0.273 Sum_probs=85.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCC-EEEEEcchhhHHh-hCCCCCee
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPR-VRLHIGDAVEFLR-QVPRGKYD 236 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~r-v~v~~gD~~~~l~-~~~~~~fD 236 (387)
...+|||+++|+|..+.++++.. +..+|++||+|+..++.+++++..+ ++++ + ++++.+|+.++++ .. .++||
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N--gl~~-~~v~v~~~Da~~~l~~~~-~~~fD 127 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN--NIPE-DRYEIHGMEANFFLRKEW-GFGFD 127 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT--TCCG-GGEEEECSCHHHHHHSCC-SSCEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh--CCCC-ceEEEEeCCHHHHHHHhh-CCCCc
Confidence 35699999999999999999863 4579999999999999999998765 2333 5 9999999999987 65 45899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+|++|++ +. ..++++.+.+.|++||++++..
T Consensus 128 ~V~lDP~---g~-----~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDPF---GT-----PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECCS---SC-----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCC---cC-----HHHHHHHHHHHhCCCCEEEEEe
Confidence 9999973 21 1358999999999999887643
No 215
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.97 E-value=1.1e-09 Score=109.28 Aligned_cols=121 Identities=21% Similarity=0.305 Sum_probs=88.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
+.+.+|||+|||+|.++..++++. ...+|+++|+|+.+++.| ++++++.+|..++. ..++||+
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~---~~~~fD~ 101 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWE---PGEAFDL 101 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCC---CSSCEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcC---ccCCCCE
Confidence 346699999999999999999863 357999999999988765 37899999988753 2458999
Q ss_pred EEEcCCCCCCCc---------cc---c-------------chHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHH
Q 016578 238 IIVDSSDPVGPA---------QE---L-------------VEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISIC 292 (387)
Q Consensus 238 II~D~~dp~~~~---------~~---L-------------~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l 292 (387)
|+++++...... .. . ....|++.+.+.|+|||.+++...+.|+.......+.+.+
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l 181 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFL 181 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHH
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHH
Confidence 999876422111 00 0 1126899999999999999877666666555555666666
Q ss_pred HHH
Q 016578 293 RET 295 (387)
Q Consensus 293 ~~~ 295 (387)
.+.
T Consensus 182 ~~~ 184 (421)
T 2ih2_A 182 ARE 184 (421)
T ss_dssp HHH
T ss_pred Hhc
Confidence 554
No 216
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.97 E-value=2.1e-09 Score=103.63 Aligned_cols=128 Identities=16% Similarity=0.156 Sum_probs=86.1
Q ss_pred eEEEEcCeE-eecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhccc
Q 016578 128 KVLVLDGIV-QLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPE 206 (387)
Q Consensus 128 ~~L~lDG~~-q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~ 206 (387)
..+.++|.. ..-.+..+...+++..+.+ ....++|||||||+|.++..+++++ ..+|++||+++.+++.+.+.
T Consensus 54 d~I~v~g~~~~yvsrg~~Kl~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~--- 127 (291)
T 3hp7_A 54 TELKLKGEKLRYVSRGGLKLEKALAVFNL--SVEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQ--- 127 (291)
T ss_dssp CCEEETTCCCCSSSTTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHT---
T ss_pred CEEEEcccccccccchHHHHHHHHHhcCC--CccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh---
Confidence 345556543 2334444455677766654 2456799999999999999999884 57999999999999886543
Q ss_pred ccCCCCCCCEEEEE-cchhhHHh-hCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 207 LAVGFEDPRVRLHI-GDAVEFLR-QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 207 ~~~~~~d~rv~v~~-gD~~~~l~-~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++++.... .|++..-. ..+...||+|++|.+... ...++..+++.|+|||.+++.
T Consensus 128 ------~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s-------l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 128 ------DDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS-------LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp ------CTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred ------CcccceecccCceecchhhCCCCCCCEEEEEeeHhh-------HHHHHHHHHHHcCcCCEEEEE
Confidence 34554332 33332211 123335999999876432 134799999999999988763
No 217
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.97 E-value=1.8e-09 Score=105.79 Aligned_cols=106 Identities=31% Similarity=0.427 Sum_probs=80.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+..+|||||||+|..+..+++..+..+++++|+ +.+++.+++++... ++ .++++++.+|..+.+ + ..||+|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~---~-~~~D~v 253 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE--GL-SDRVDVVEGDFFEPL---P-RKADAI 253 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC---S-SCEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--CC-CCceEEEeCCCCCCC---C-CCccEE
Confidence 4567999999999999999998866678999999 99999999987654 22 348999999987532 2 359999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++.......+.. ....+++.++++|+|||.+++.
T Consensus 254 ~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 254 ILSFVLLNWPDH--DAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEcccccCCCHH--HHHHHHHHHHHhcCCCcEEEEE
Confidence 976543221111 1246899999999999988753
No 218
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.96 E-value=2.4e-09 Score=108.17 Aligned_cols=115 Identities=17% Similarity=0.252 Sum_probs=87.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+..+|||+|||.|+.+..+++..+..+|+++|+++..++.+++++.... .+++++.+|+.++....++++||+|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-----~~~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-----MKATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-----CCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-----CCeEEEeCchhhchhhcccCCCCEE
Confidence 45679999999999999999987655799999999999999999987652 2478999999876432334689999
Q ss_pred EEcCCCCC-CC----cc--------c-----cchHHHHHHHHHhccCCCeEEeccccc
Q 016578 239 IVDSSDPV-GP----AQ--------E-----LVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 239 I~D~~dp~-~~----~~--------~-----L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
++|.+... +. +. . -.+.++++.+.+.|+|||+++..+.+.
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 99976321 11 00 0 112578999999999999999765443
No 219
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.94 E-value=3.2e-09 Score=108.37 Aligned_cols=115 Identities=16% Similarity=0.194 Sum_probs=88.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
....+|||+|||.|+.+..+++. .+..+|+++|+|+..++.+++++.... + .+++++.+|+.++.... +++||+
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g--~--~nv~v~~~Da~~l~~~~-~~~FD~ 178 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG--V--SNAIVTNHAPAELVPHF-SGFFDR 178 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT--C--SSEEEECCCHHHHHHHH-TTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC--C--CceEEEeCCHHHhhhhc-cccCCE
Confidence 45679999999999999999876 334699999999999999999987662 2 36999999999876433 468999
Q ss_pred EEEcCCC-CCCC----cc--------c-----cchHHHHHHHHHhccCCCeEEeccccc
Q 016578 238 IIVDSSD-PVGP----AQ--------E-----LVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 238 II~D~~d-p~~~----~~--------~-----L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
|++|.+- ..+. +. . -.+.++++.+.+.|+|||+|+..+.+.
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 9999763 1111 00 0 123478999999999999998765543
No 220
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.94 E-value=1.6e-09 Score=104.70 Aligned_cols=107 Identities=18% Similarity=0.161 Sum_probs=81.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..+++..+..+++++|++ .+++.+++++.... + ..+++++.+|..+. .. .+.||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~--~~-~~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG--V-ASRYHTIAGSAFEV--DY-GNDYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT--C-GGGEEEEESCTTTS--CC-CSCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC--C-CcceEEEecccccC--CC-CCCCcEE
Confidence 45679999999999999999988666799999999 99999999876541 1 24799999998763 22 3359999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++...-...+.. ....+++.++++|+|||.+++.
T Consensus 237 ~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 237 LLPNFLHHFDVA--TCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcchhccCCHH--HHHHHHHHHHHhCCCCcEEEEE
Confidence 974432211111 1246899999999999977653
No 221
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.94 E-value=5.8e-09 Score=103.37 Aligned_cols=102 Identities=16% Similarity=0.166 Sum_probs=79.5
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCC--------
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR-------- 232 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~-------- 232 (387)
+.+|||+|||+|.++..+++. ..+|++||+++.+++.|++++... ++ ++++++.+|+.+++.....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~n--g~--~~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAAN--HI--DNVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHT--TC--CSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHc--CC--CceEEEECCHHHHHHHHhhcccccccc
Confidence 578999999999999999885 369999999999999999998654 22 4899999999998754322
Q ss_pred ------CCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccccc
Q 016578 233 ------GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 233 ------~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
.+||+|++|++.. + ....+.+.|+++|.++..+.++
T Consensus 288 ~~~~~~~~fD~Vv~dPPr~-g---------~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPPRS-G---------LDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp GSCGGGCCEEEEEECCCTT-C---------CCHHHHHHHTTSSEEEEEESCH
T ss_pred ccccccCCCCEEEECcCcc-c---------cHHHHHHHHhCCCEEEEEECCH
Confidence 2799999987542 1 2335666777899888766554
No 222
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.94 E-value=2e-09 Score=105.48 Aligned_cols=128 Identities=14% Similarity=0.151 Sum_probs=93.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCC-----ceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCC
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSV-----ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK 234 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~-----~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~ 234 (387)
...+|||+|||+|+++..++++.+. .+++++|+|+.+++.|+.++... + .+++++.+|..... ..++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~--g---~~~~i~~~D~l~~~---~~~~ 201 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ--R---QKMTLLHQDGLANL---LVDP 201 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH--T---CCCEEEESCTTSCC---CCCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC--C---CCceEEECCCCCcc---ccCC
Confidence 4569999999999999999876422 68999999999999999987644 1 26899999976532 2468
Q ss_pred eeEEEEcCCCCCCCcc--------------ccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH
Q 016578 235 YDAIIVDSSDPVGPAQ--------------ELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET 295 (387)
Q Consensus 235 fDvII~D~~dp~~~~~--------------~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~ 295 (387)
||+|+.+++....+.. ......|++.+.+.|+|||++++...+.++.......+.+.+.+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC
Confidence 9999999773221100 011236899999999999998876655566555555666665554
No 223
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.92 E-value=4.5e-09 Score=103.15 Aligned_cols=105 Identities=21% Similarity=0.178 Sum_probs=80.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++... ++ ..+++++.+|+.+. .. ..+|+|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~~--~~~D~v 260 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK--GV-ADRMRGIAVDIYKE--SY--PEADAV 260 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TC-TTTEEEEECCTTTS--CC--CCCSEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc--CC-CCCEEEEeCccccC--CC--CCCCEE
Confidence 5678999999999999999999866679999999 99999999987654 12 34799999998764 12 235999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
++.......+. -....+++.++++|+|||.+++
T Consensus 261 ~~~~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i 293 (359)
T 1x19_A 261 LFCRILYSANE--QLSTIMCKKAFDAMRSGGRLLI 293 (359)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEE
T ss_pred EEechhccCCH--HHHHHHHHHHHHhcCCCCEEEE
Confidence 97654322221 1135689999999999999865
No 224
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.92 E-value=3.5e-09 Score=107.81 Aligned_cols=116 Identities=18% Similarity=0.283 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCC-ceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSV-ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~-~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
....+|||+|||.|+.+..+++..+. .+|+++|+++..++.+++++.... -++++++.+|+.++....++++||+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG----IKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC----CCcEEEEEcChhhcchhhccCCCCE
Confidence 44569999999999999999987433 699999999999999999987552 2479999999887643233367999
Q ss_pred EEEcCCCC-CCC----cc--------c-----cchHHHHHHHHHhccCCCeEEeccccc
Q 016578 238 IIVDSSDP-VGP----AQ--------E-----LVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 238 II~D~~dp-~~~----~~--------~-----L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
|++|.+-. .+. ++ . -.+..+++.+.+.|+|||+++..+.+.
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99997541 111 00 0 012578999999999999998765443
No 225
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.92 E-value=3.9e-10 Score=107.13 Aligned_cols=114 Identities=18% Similarity=0.109 Sum_probs=74.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCC------------C--------------
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE------------D-------------- 213 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~------------d-------------- 213 (387)
++.+|||||||+|.....+++.. ..+|+++|+++.+++.|++++......++ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 56799999999999554444432 35999999999999999987643110000 0
Q ss_pred CCEEEEEcchhhHHh----hCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 214 PRVRLHIGDAVEFLR----QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 214 ~rv~v~~gD~~~~l~----~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
..++++.+|+.+.+. ..++++||+|++...........--...+++.++++|||||+|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 125677788876332 1224579999976542211100001346899999999999998864
No 226
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.91 E-value=6.7e-09 Score=106.71 Aligned_cols=114 Identities=24% Similarity=0.290 Sum_probs=87.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
...+|||+|||+|+.+..+++.. +..+|+++|+++..++.+++++.... -++++++.+|+.++.... .+.||+|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g----~~nv~~~~~D~~~~~~~~-~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG----ISNVALTHFDGRVFGAAV-PEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCCSTTHHHHS-TTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCCHHHhhhhc-cccCCEE
Confidence 56799999999999999999863 34699999999999999999987652 247999999998865423 4689999
Q ss_pred EEcCCCC-CCC----ccc-------------cchHHHHHHHHHhccCCCeEEeccccc
Q 016578 239 IVDSSDP-VGP----AQE-------------LVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 239 I~D~~dp-~~~----~~~-------------L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
++|++-. .+. ++. -.+.++++.+.++|+|||+|+..+.+.
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 9997631 111 110 113578999999999999999765543
No 227
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.91 E-value=1.4e-09 Score=108.97 Aligned_cols=108 Identities=23% Similarity=0.289 Sum_probs=76.2
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCc------ccHHHHHHHh-cCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEE
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGG------DGGVLREISR-HDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVR 217 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G------~G~~~~el~k-~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~ 217 (387)
.|.+.+..+ ..++.+||||||| +|+.+..+++ +.+..+|++||+++.+. . ..++++
T Consensus 205 ~Ye~lL~~l----~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-------~~~rI~ 267 (419)
T 3sso_A 205 HYDRHFRDY----RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-------DELRIR 267 (419)
T ss_dssp HHHHHHGGG----TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-------CBTTEE
T ss_pred HHHHHHHhh----cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-------cCCCcE
Confidence 466665543 2467899999999 5555555554 44567999999999962 1 246899
Q ss_pred EEEcchhh--HHhhC--CCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 218 LHIGDAVE--FLRQV--PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 218 v~~gD~~~--~l~~~--~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++++|+.+ |+... ..++||+|++|..... . -...+|+.++++|||||++++.
T Consensus 268 fv~GDa~dlpf~~~l~~~d~sFDlVisdgsH~~---~--d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 268 TIQGDQNDAEFLDRIARRYGPFDIVIDDGSHIN---A--HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp EEECCTTCHHHHHHHHHHHCCEEEEEECSCCCH---H--HHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEecccccchhhhhhcccCCccEEEECCcccc---h--hHHHHHHHHHHhcCCCeEEEEE
Confidence 99999876 33111 1358999998764211 1 1346899999999999999874
No 228
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.90 E-value=5.5e-09 Score=99.56 Aligned_cols=109 Identities=13% Similarity=0.085 Sum_probs=74.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeC-CHHHHHHHHhhcccc---cCCCC---CCCEEEEEcchh----hHH
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEI-DKMVIDVSKKYFPEL---AVGFE---DPRVRLHIGDAV----EFL 227 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEi-D~~vi~~ar~~~~~~---~~~~~---d~rv~v~~gD~~----~~l 227 (387)
...++|||||||+|.++..+++.. ..+|+++|+ |+.+++.++++...+ ..++. .++++++..|.. ...
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 356799999999999999998874 459999999 999999999987321 00111 147888855532 222
Q ss_pred hhCCCCCeeEEEE-cCCCCCCCccccchHHHHHHHHHhcc---C--CCeEEe
Q 016578 228 RQVPRGKYDAIIV-DSSDPVGPAQELVEKPFFDTIAKALR---P--GGVLCN 273 (387)
Q Consensus 228 ~~~~~~~fDvII~-D~~dp~~~~~~L~~~ef~~~l~~~Lk---p--gGvlv~ 273 (387)
.....++||+|++ |..... . ....+++.+.++|+ | ||++++
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~--~---~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH--Q---AHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG--G---GHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred hhccCCCCCEEEEeCcccCh--H---HHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 1112468999996 543221 1 13468999999999 9 997654
No 229
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.90 E-value=1.8e-09 Score=110.91 Aligned_cols=108 Identities=18% Similarity=0.128 Sum_probs=80.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++ .++++++.+|+.++ .. .++||+|
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~--gl-~~~v~~~~~d~~~~--~~-~~~fD~I 228 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN--NL-TDRIVVIPGKVEEV--SL-PEQVDII 228 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHT--TC-TTTEEEEESCTTTC--CC-SSCEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHc--CC-CCcEEEEECchhhC--cc-CCCeEEE
Confidence 35679999999999999999986 457999999999 889999987654 22 35899999998774 12 3589999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+++......... -..+.+..+++.|+|||+++....
T Consensus 229 vs~~~~~~~~~e--~~~~~l~~~~~~LkpgG~li~~~~ 264 (480)
T 3b3j_A 229 ISEPMGYMLFNE--RMLESYLHAKKYLKPSGNMFPTIG 264 (480)
T ss_dssp ECCCCHHHHTCH--HHHHHHHHGGGGEEEEEEEESCEE
T ss_pred EEeCchHhcCcH--HHHHHHHHHHHhcCCCCEEEEEec
Confidence 975431100001 123467778899999999986543
No 230
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.89 E-value=4.5e-09 Score=104.37 Aligned_cols=101 Identities=20% Similarity=0.135 Sum_probs=77.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+...+|||+|||+|.++.++++.....+|+++|+|+.+++.|++++... ++ +.+++++.+|+.+... +.++||+|
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~--gl-~~~i~~~~~D~~~~~~--~~~~fD~I 290 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA--GV-LDKIKFIQGDATQLSQ--YVDSVDFA 290 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--TC-GGGCEEEECCGGGGGG--TCSCEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--CC-CCceEEEECChhhCCc--ccCCcCEE
Confidence 5567999999999999999999865458999999999999999998654 22 2489999999988642 24689999
Q ss_pred EEcCCCCCCC-----ccccchHHHHHHHHHhc
Q 016578 239 IVDSSDPVGP-----AQELVEKPFFDTIAKAL 265 (387)
Q Consensus 239 I~D~~dp~~~-----~~~L~~~ef~~~l~~~L 265 (387)
++|++..... ...+ ..++++.+++.|
T Consensus 291 i~npPyg~r~~~~~~~~~l-y~~~~~~l~r~l 321 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDL-YMKFFNELAKVL 321 (373)
T ss_dssp EEECCCC------CCHHHH-HHHHHHHHHHHE
T ss_pred EECCCCCcccCcchhHHHH-HHHHHHHHHHHc
Confidence 9988753321 1112 246888889988
No 231
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.88 E-value=1.6e-09 Score=103.64 Aligned_cols=146 Identities=11% Similarity=0.076 Sum_probs=91.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEE--EcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~--~gD~~~~l~~~~~~~fD 236 (387)
.+..+|||||||+|+.+..+++. .+|++||+++ ++..+++. +.....+ +.+++++ .+|+.++ ++++||
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~-~~~~~~~-~~~v~~~~~~~D~~~l----~~~~fD 150 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK-PRLVETF-GWNLITFKSKVDVTKM----EPFQAD 150 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC-CCCCCCT-TGGGEEEECSCCGGGC----CCCCCS
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc-hhhhhhc-CCCeEEEeccCcHhhC----CCCCcC
Confidence 45669999999999999999987 5899999999 43333221 1000001 1278899 8998763 256899
Q ss_pred EEEEcCCCCCCCcc---ccchHHHHHHHHHhccCCC--eEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccC
Q 016578 237 AIIVDSSDPVGPAQ---ELVEKPFFDTIAKALRPGG--VLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYP 311 (387)
Q Consensus 237 vII~D~~dp~~~~~---~L~~~ef~~~l~~~LkpgG--vlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp 311 (387)
+|++|.. ...... ..-...+++.+.+.|+||| .|++..-.+.. ..+...++.++..|. .+.. . |.+.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~--~~~~~~l~~l~~~f~-~v~v---~-P~~s 222 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYS--CDVLEALMKMQARFG-GGLI---R-VPLS 222 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCS--HHHHHHHHHHHHHHC-CEEE---C-CTTS
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCc--hhHHHHHHHHHHHcC-CEEE---E-cCCC
Confidence 9999976 332211 0001136888999999999 88875433221 223356677788887 3322 2 5542
Q ss_pred C--CcEEEEEEec
Q 016578 312 S--GIIGFLICST 322 (387)
Q Consensus 312 ~--g~~gf~~ask 322 (387)
. ...-|++|..
T Consensus 223 R~~s~E~y~v~~~ 235 (276)
T 2wa2_A 223 RNSTHEMYFVSGI 235 (276)
T ss_dssp CTTCCCEEEESSC
T ss_pred CCcchheEEeccc
Confidence 2 1344666644
No 232
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.88 E-value=3.8e-09 Score=96.13 Aligned_cols=92 Identities=14% Similarity=0.115 Sum_probs=72.5
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
+.+|||||||+|..+..+++. +++|+++.+++.+++. +++++.+|+.+.. .++++||+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~~--~~~~~fD~v~~ 108 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENLP--LKDESFDFALM 108 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBCC--SCTTCEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccCC--CCCCCeeEEEE
Confidence 779999999999999988764 9999999999999885 4688889976542 23568999997
Q ss_pred cCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 241 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 241 D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.......+ -...+++.+.+.|+|||.+++..
T Consensus 109 ~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 109 VTTICFVD----DPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp ESCGGGSS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchHhhcc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 65422111 12468999999999999988754
No 233
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.87 E-value=1.7e-08 Score=92.29 Aligned_cols=101 Identities=14% Similarity=0.060 Sum_probs=77.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCC-CCCEEEEEcchhh------------
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE-DPRVRLHIGDAVE------------ 225 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~-d~rv~v~~gD~~~------------ 225 (387)
.++++||+||+ |..+..+++.. ..+|+.||.|++..+.+++++... ++. ..+++++.+|+.+
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~--g~~~~~~I~~~~gda~~~~~wg~p~~~~~ 103 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAELP-GKHVTSVESDRAWARMMKAWLAAN--PPAEGTEVNIVWTDIGPTGDWGHPVSDAK 103 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHS--CCCTTCEEEEEECCCSSBCGGGCBSSSTT
T ss_pred hCCCEEEEECc--hHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHc--CCCCCCceEEEEeCchhhhcccccccchh
Confidence 36789999998 47888888864 579999999999999999999764 331 3489999999643
Q ss_pred ------HHh---hC-CCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 226 ------FLR---QV-PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 226 ------~l~---~~-~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
+.. .. ..+.||+|++|... ..+++..+.+.|+|||++++
T Consensus 104 ~~~l~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 104 WRSYPDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp GGGTTHHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEE
T ss_pred hhhHHHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEE
Confidence 221 11 13689999999742 12567778899999999986
No 234
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.86 E-value=2.3e-09 Score=107.29 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+..+|||||||+|.++..++++. .+|+++|+++.+++.|++.-. ......+..+|+.. +.. ++++||+|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~~~~~~-l~~-~~~~fD~I 175 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREKGI------RVRTDFFEKATADD-VRR-TEGPANVI 175 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTTTC------CEECSCCSHHHHHH-HHH-HHCCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHcCC------CcceeeechhhHhh-ccc-CCCCEEEE
Confidence 456799999999999999999874 499999999999999998711 11011122233332 221 24689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++...-...+ -...+++.++++|+|||++++..
T Consensus 176 ~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 176 YAANTLCHIP----YVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEESCGGGCT----THHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECChHHhcC----CHHHHHHHHHHHcCCCeEEEEEe
Confidence 9765432221 13569999999999999999764
No 235
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.86 E-value=1.1e-08 Score=110.27 Aligned_cols=111 Identities=16% Similarity=0.085 Sum_probs=81.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccC--CCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAV--GFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~--~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
.+.+|||||||+|.++..+++.. +..+|++||+|+.+++.|++.+..... ....++++++.+|+.++.. ..+.||
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~--~d~sFD 798 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS--RLHDVD 798 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT--TSCSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc--ccCCee
Confidence 67799999999999999999986 457999999999999999986543211 1123589999999887532 356899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+|++...-...+.. ....+++.+.+.|+|| .+++..
T Consensus 799 lVV~~eVLeHL~dp--~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 799 IGTCLEVIEHMEED--QACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEEESCGGGSCHH--HHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEEeCchhhCChH--HHHHHHHHHHHHcCCC-EEEEEe
Confidence 99975432211111 1234899999999999 665543
No 236
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.84 E-value=3.2e-09 Score=100.91 Aligned_cols=126 Identities=11% Similarity=0.080 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEE--EcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH--IGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~--~gD~~~~l~~~~~~~fD 236 (387)
.+..+|||||||+|+.+..+++. .+|++||+++ ++..+++. +.....+ +.+++++ .+|+.++ ++++||
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~~~~-~~~v~~~~~~~D~~~l----~~~~fD 142 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRITESY-GWNIVKFKSRVDIHTL----PVERTD 142 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCCCBT-TGGGEEEECSCCTTTS----CCCCCS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhhhcc-CCCeEEEecccCHhHC----CCCCCc
Confidence 45679999999999999999987 5899999999 33222211 1000001 1268888 8898763 256899
Q ss_pred EEEEcCCCCCCCccc---cchHHHHHHHHHhccCCC--eEEecccccchhhhHHHHHHHHHHHHcC
Q 016578 237 AIIVDSSDPVGPAQE---LVEKPFFDTIAKALRPGG--VLCNMAESMWLHTHLIEDMISICRETFK 297 (387)
Q Consensus 237 vII~D~~dp~~~~~~---L~~~ef~~~l~~~LkpgG--vlv~q~~s~~~~~~~~~~~~~~l~~~F~ 297 (387)
+|++|.. ....... .-...+++.+.+.|+||| .|++..-.+. ...+..++..++..|.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~--~~~~~~~l~~l~~~f~ 205 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPY--SVEVMERLSVMQRKWG 205 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTT--SHHHHHHHHHHHHHHC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCC--ChhHHHHHHHHHHHcC
Confidence 9999976 3222110 001137888999999999 8887543322 1223366677788887
No 237
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.83 E-value=1.4e-08 Score=102.78 Aligned_cols=113 Identities=13% Similarity=0.128 Sum_probs=83.3
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
.|..++..+. .....+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++... + -++++++.+|+.
T Consensus 274 l~~~~~~~l~---~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~--~--~~~v~f~~~d~~ 344 (433)
T 1uwv_A 274 MVARALEWLD---VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLN--G--LQNVTFYHENLE 344 (433)
T ss_dssp HHHHHHHHHT---CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHT--T--CCSEEEEECCTT
T ss_pred HHHHHHHhhc---CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHc--C--CCceEEEECCHH
Confidence 3444544443 245679999999999999999987 479999999999999999998654 1 238999999998
Q ss_pred hHHhh--CCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 225 EFLRQ--VPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 225 ~~l~~--~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+++.. ..+++||+|++|.+.... .++++.+.+ ++|++++.+.
T Consensus 345 ~~l~~~~~~~~~fD~Vv~dPPr~g~-------~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 345 EDVTKQPWAKNGFDKVLLDPARAGA-------AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp SCCSSSGGGTTCCSEEEECCCTTCC-------HHHHHHHHH-HCCSEEEEEE
T ss_pred HHhhhhhhhcCCCCEEEECCCCccH-------HHHHHHHHh-cCCCeEEEEE
Confidence 86543 224589999998754211 145665553 7898887763
No 238
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.83 E-value=1.2e-08 Score=99.86 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=75.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+...+|||||||+|..+..+++..+..+++++|+ +.++. ++.+.... ..++++++.+|.++ .. + .||+|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~---~~~~v~~~~~d~~~---~~-p-~~D~v 251 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD---VAGRWKVVEGDFLR---EV-P-HADVH 251 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG---GTTSEEEEECCTTT---CC-C-CCSEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC---CCCCeEEEecCCCC---CC-C-CCcEE
Confidence 5677999999999999999999877779999999 55555 44433221 14689999999863 23 3 89999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++...-+..+.. ....+++.++++|+|||.+++.
T Consensus 252 ~~~~vlh~~~d~--~~~~~L~~~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 252 VLKRILHNWGDE--DSVRILTNCRRVMPAHGRVLVI 285 (348)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEehhccCCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 976543222211 1246899999999999998763
No 239
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.82 E-value=9.6e-09 Score=95.59 Aligned_cols=115 Identities=13% Similarity=0.123 Sum_probs=76.6
Q ss_pred cchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE
Q 016578 141 KDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI 220 (387)
Q Consensus 141 ~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~ 220 (387)
+..+...+++..++. .+..++|||||||+|.++..+++.+ ..+|++||+++.+++.+++..+ ++....
T Consensus 20 rg~~kL~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~---------~~~~~~ 87 (232)
T 3opn_A 20 RGGLKLEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDE---------RVVVME 87 (232)
T ss_dssp TTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCT---------TEEEEC
T ss_pred CcHHHHHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCc---------cccccc
Confidence 333344566666643 2456799999999999999999884 4599999999999999887643 332221
Q ss_pred cchhhHHh--hCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 221 GDAVEFLR--QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 221 gD~~~~l~--~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
..-..++. ......||.+.+|...... ..+++.++++|+|||.+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~d~~~~D~v~~~l-------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 88 QFNFRNAVLADFEQGRPSFTSIDVSFISL-------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SCCGGGCCGGGCCSCCCSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEEEE
T ss_pred cceEEEeCHhHcCcCCCCEEEEEEEhhhH-------HHHHHHHHHhccCCCEEEEE
Confidence 11112221 1212236777777543211 35899999999999988864
No 240
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.81 E-value=1.4e-08 Score=97.13 Aligned_cols=88 Identities=17% Similarity=0.315 Sum_probs=68.4
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
....++..+.. .+..+|||||||+|.++..+++.. .+|++||+|+.+++.+++.+.... . .++++++.+|+.
T Consensus 16 i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~D~~ 87 (285)
T 1zq9_A 16 IINSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTP--V-ASKLQVLVGDVL 87 (285)
T ss_dssp HHHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTST--T-GGGEEEEESCTT
T ss_pred HHHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcC--C-CCceEEEEccee
Confidence 44556655543 456799999999999999999884 589999999999999999875321 1 258999999987
Q ss_pred hHHhhCCCCCeeEEEEcCCC
Q 016578 225 EFLRQVPRGKYDAIIVDSSD 244 (387)
Q Consensus 225 ~~l~~~~~~~fDvII~D~~d 244 (387)
++ . -..||+|+++.+.
T Consensus 88 ~~--~--~~~fD~vv~nlpy 103 (285)
T 1zq9_A 88 KT--D--LPFFDTCVANLPY 103 (285)
T ss_dssp TS--C--CCCCSEEEEECCG
T ss_pred cc--c--chhhcEEEEecCc
Confidence 64 2 2379999998754
No 241
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.80 E-value=1.7e-08 Score=102.27 Aligned_cols=99 Identities=12% Similarity=0.215 Sum_probs=78.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
....+|||+|||+|.++..+++.. .+|++||+++.+++.|++++.... + . ++++.+|+.+++. .+||+|
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~~ng--l--~-v~~~~~d~~~~~~----~~fD~V 357 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVEINN--V--D-AEFEVASDREVSV----KGFDTV 357 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHT--C--C-EEEEECCTTTCCC----TTCSEE
T ss_pred CCCCEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcC--C--c-EEEEECChHHcCc----cCCCEE
Confidence 456799999999999999999873 699999999999999999986541 2 2 9999999988752 279999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
++|.+.. + ...++++.+. .|+|+|++.+..
T Consensus 358 v~dPPr~-g-----~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 358 IVDPPRA-G-----LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp EECCCTT-C-----SCHHHHHHHH-HHCCSEEEEEES
T ss_pred EEcCCcc-c-----hHHHHHHHHH-hcCCCcEEEEEC
Confidence 9987531 1 1234666665 599999988754
No 242
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.80 E-value=2.7e-08 Score=97.88 Aligned_cols=105 Identities=19% Similarity=0.227 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+..++|||||||+|..+..+++..+..++++.|+ |.+++.+++++... ..+||+++.+|.++ . +...+|+|
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~----~~~rv~~~~gD~~~---~-~~~~~D~~ 248 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ----EEEQIDFQEGDFFK---D-PLPEADLY 248 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTT---S-CCCCCSEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc----ccCceeeecCcccc---C-CCCCceEE
Confidence 4567999999999999999999877889999998 89999999987643 24699999999754 2 23468999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++-..-+..+.+ ....+++.++++|+|||.+++.
T Consensus 249 ~~~~vlh~~~d~--~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 249 ILARVLHDWADG--KCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EEESSGGGSCHH--HHHHHHHHHHHHCCTTCEEEEE
T ss_pred EeeeecccCCHH--HHHHHHHHHHhhCCCCCEEEEE
Confidence 975443322211 1245899999999999987753
No 243
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.79 E-value=3.5e-09 Score=100.38 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=85.3
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
|...+..+ +.|.+|||||||.|-++..++...+..+++++|||+.+++++++++..+ ..+.++.+.|...
T Consensus 123 Y~~i~~~i-----~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~-----g~~~~~~v~D~~~ 192 (281)
T 3lcv_B 123 YRELFRHL-----PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL-----NVPHRTNVADLLE 192 (281)
T ss_dssp HHHHGGGS-----CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-----TCCEEEEECCTTT
T ss_pred HHHHHhcc-----CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeeecc
Confidence 66665554 5588999999999999999888777899999999999999999998765 3468888888543
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
..+.++||+|++...-|.-... -....| .+.+.|+++|+++.
T Consensus 193 ---~~p~~~~DvaL~lkti~~Le~q--~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 193 ---DRLDEPADVTLLLKTLPCLETQ--QRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp ---SCCCSCCSEEEETTCHHHHHHH--STTHHH-HHHHHSSCSEEEEE
T ss_pred ---cCCCCCcchHHHHHHHHHhhhh--hhHHHH-HHHHHhCCCCEEEe
Confidence 3356789999976543221100 011345 78999999999985
No 244
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.77 E-value=6.6e-09 Score=100.69 Aligned_cols=125 Identities=14% Similarity=0.167 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeC----CHHHHHHHHhhcccccCCCCCCCEEEEEc-chhhHHhhCCCC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEI----DKMVIDVSKKYFPELAVGFEDPRVRLHIG-DAVEFLRQVPRG 233 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEi----D~~vi~~ar~~~~~~~~~~~d~rv~v~~g-D~~~~l~~~~~~ 233 (387)
++..+|||||||+|+.+..+++. .+|++||+ ++..++. .+ . .....++++++.+ |+..+ +.+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~----~~-~-~~~~~~~v~~~~~~D~~~l----~~~ 147 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEP----IP-M-STYGWNLVRLQSGVDVFFI----PPE 147 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCC----CC-C-CSTTGGGEEEECSCCTTTS----CCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHH----HH-h-hhcCCCCeEEEeccccccC----CcC
Confidence 44579999999999999999987 47999999 4433221 11 0 0112357999999 87654 245
Q ss_pred CeeEEEEcCCCCCCCc--cccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCC
Q 016578 234 KYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKG 298 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~--~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~ 298 (387)
+||+|++|.....+.. +..-....++.+.+.|+|||.|++....+. ......++..++..|..
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~--~~~~~~~l~~l~~~f~~ 212 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPY--MSSVIEKMEALQRKHGG 212 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCC--SHHHHHHHHHHHHHHCC
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCC--CchHHHHHHHHHHHcCC
Confidence 8999999976432211 111011478888999999999997543221 12345667777888873
No 245
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.77 E-value=4.6e-08 Score=93.50 Aligned_cols=122 Identities=18% Similarity=0.208 Sum_probs=81.9
Q ss_pred HHHHHhccccCCCCCCEEEEEcCcc--cHHHHHHHh-cCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcch
Q 016578 147 QEMIAHLPLCSIPSPKTVLVVGGGD--GGVLREISR-HDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA 223 (387)
Q Consensus 147 ~eml~~l~l~~~~~p~~VL~IG~G~--G~~~~el~k-~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~ 223 (387)
+..+.+++. .....+|||||||. ++.+.++++ ..+..+|++||+|+.|++.||+.+... ...+++++.+|+
T Consensus 67 ~rav~~l~~--~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~----~~~~~~~v~aD~ 140 (277)
T 3giw_A 67 NRAVAHLAK--EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST----PEGRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHH--TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC----SSSEEEEEECCT
T ss_pred HHHHHHhcc--ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC----CCCcEEEEEecc
Confidence 455555532 13457999999997 445555554 445679999999999999999988642 134799999999
Q ss_pred hhHHh--hCC--CCCee-----EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 224 VEFLR--QVP--RGKYD-----AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 224 ~~~l~--~~~--~~~fD-----vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.+.-. ..+ .+.|| +|++....++-+... --...++.+++.|+|||+|++..
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~-~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED-DAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG-CHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchh-hHHHHHHHHHHhCCCCcEEEEEe
Confidence 87521 000 13455 466665544433211 01458999999999999998753
No 246
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.75 E-value=3.8e-08 Score=95.04 Aligned_cols=86 Identities=17% Similarity=0.275 Sum_probs=67.8
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
-..++..+.. ....+|||||||+|.++..+++.. .+|++||+|+.+++.+++.+.. .++++++.+|+.+
T Consensus 39 ~~~Iv~~l~~---~~~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~ 107 (295)
T 3gru_A 39 VNKAVESANL---TKDDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALK 107 (295)
T ss_dssp HHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTT
T ss_pred HHHHHHhcCC---CCcCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhh
Confidence 4455554432 456799999999999999999983 7999999999999999998762 3689999999987
Q ss_pred HHhhCCCCCeeEEEEcCCC
Q 016578 226 FLRQVPRGKYDAIIVDSSD 244 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~d 244 (387)
+- .++..||+|+.+.+.
T Consensus 108 ~~--~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 108 VD--LNKLDFNKVVANLPY 124 (295)
T ss_dssp SC--GGGSCCSEEEEECCG
T ss_pred CC--cccCCccEEEEeCcc
Confidence 52 223469999987653
No 247
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.74 E-value=1.8e-08 Score=99.69 Aligned_cols=98 Identities=21% Similarity=0.136 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+...+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|.++. .++ . |+|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~---~p~-~-D~v 265 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFDG---VPK-G-DAI 265 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC---CCC-C-SEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCCC---CCC-C-CEE
Confidence 4567999999999999999998877789999999 888876653 25899999998752 333 3 999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++...-+..+.. -...+++.++++|+|||.+++.
T Consensus 266 ~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 266 FIKWICHDWSDE--HCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp EEESCGGGBCHH--HHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEechhhcCCHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 976543222211 1236899999999999988763
No 248
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.71 E-value=2.5e-08 Score=99.71 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC--------------------------------------CceEEEEeCCHHHHHHH
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS--------------------------------------VELIDICEIDKMVIDVS 200 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~--------------------------------------~~~Vt~VEiD~~vi~~a 200 (387)
....+|||++||+|.++.+++.... ..+|+++|+|+.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 3456899999999999999876521 14799999999999999
Q ss_pred HhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccC--CCeEEecccc
Q 016578 201 KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRP--GGVLCNMAES 277 (387)
Q Consensus 201 r~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~Lkp--gGvlv~q~~s 277 (387)
++++... +++ .++++..+|+.++.. +++||+||+|++........-...++|+.+.+.|++ ||.+.+-+.+
T Consensus 274 r~Na~~~--gl~-~~i~~~~~D~~~l~~---~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 274 RENAEIA--GVD-EYIEFNVGDATQFKS---EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHHHH--TCG-GGEEEEECCGGGCCC---SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHHHHc--CCC-CceEEEECChhhcCc---CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 9998655 222 379999999988642 358999999987533221111124578877777776 7766654433
No 249
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.71 E-value=3.6e-08 Score=88.91 Aligned_cols=126 Identities=17% Similarity=0.219 Sum_probs=82.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.++.+|||||||+|..+..++ .+|+++|+++. +++++.+|+.+. ..++++||+|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~~--~~~~~~fD~v 119 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQV--PLEDESVDVA 119 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTSC--SCCTTCEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEeccccC--CCCCCCEeEE
Confidence 456799999999999998873 58999999987 245677887653 1235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHH-cCCCcceEEEEeeccCCCcEEE
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRET-FKGSVHYAWASVPTYPSGIIGF 317 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~iPtyp~g~~gf 317 (387)
++....+. . -...+++.+.++|+|||.+++...... ......+.+.+++. |. . ..+. +..+.+.+
T Consensus 120 ~~~~~l~~-~----~~~~~l~~~~~~L~~gG~l~i~~~~~~--~~~~~~~~~~l~~~Gf~-~-----~~~~-~~~~~~~~ 185 (215)
T 2zfu_A 120 VFCLSLMG-T----NIRDFLEEANRVLKPGGLLKVAEVSSR--FEDVRTFLRAVTKLGFK-I-----VSKD-LTNSHFFL 185 (215)
T ss_dssp EEESCCCS-S----CHHHHHHHHHHHEEEEEEEEEEECGGG--CSCHHHHHHHHHHTTEE-E-----EEEE-CCSTTCEE
T ss_pred EEehhccc-c----CHHHHHHHHHHhCCCCeEEEEEEcCCC--CCCHHHHHHHHHHCCCE-E-----EEEe-cCCCeEEE
Confidence 98654432 1 135789999999999999886432111 11223444444443 43 2 2222 23356777
Q ss_pred EEEecCC
Q 016578 318 LICSTEG 324 (387)
Q Consensus 318 ~~ask~~ 324 (387)
+++.|..
T Consensus 186 ~~~~k~~ 192 (215)
T 2zfu_A 186 FDFQKTG 192 (215)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 8887763
No 250
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.71 E-value=2.6e-08 Score=98.43 Aligned_cols=98 Identities=22% Similarity=0.202 Sum_probs=74.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
....+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|.++ ..++ . |+|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~---~~p~-~-D~v 263 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFK---EVPS-G-DTI 263 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT---CCCC-C-SEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCC---CCCC-C-CEE
Confidence 4567999999999999999998777779999999 888877653 2589999999876 2333 3 999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++...-+..+.. -...+++.++++|+|||.+++.
T Consensus 264 ~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 264 LMKWILHDWSDQ--HCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHSCTTCEEEEE
T ss_pred EehHHhccCCHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 976543322211 1246899999999999988764
No 251
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.71 E-value=1.7e-08 Score=99.67 Aligned_cols=98 Identities=23% Similarity=0.221 Sum_probs=75.4
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+++.+|||||||+|..+..+++..+..+++++|+ +.+++.++++ ++++++.+|.++. .+ . ||+|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~~-~-~D~v 271 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS---VP-Q-GDAM 271 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC---CC-C-EEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC---CC-C-CCEE
Confidence 4567999999999999999999876678999999 9998876541 4799999998752 22 3 9999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++...-+..+.. ....+++.++++|+|||.+++.
T Consensus 272 ~~~~~lh~~~d~--~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 272 ILKAVCHNWSDE--KCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEESSGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecccccCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 976543222211 1236899999999999988764
No 252
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.70 E-value=6e-08 Score=93.42 Aligned_cols=108 Identities=20% Similarity=0.271 Sum_probs=72.2
Q ss_pred HHHHHHHhcc--ccCCCCCCEEEEEcC------cccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCC
Q 016578 145 AYQEMIAHLP--LCSIPSPKTVLVVGG------GDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPR 215 (387)
Q Consensus 145 ~Y~eml~~l~--l~~~~~p~~VL~IG~------G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~r 215 (387)
.|.++...+. ....++..+|||||| |.|. ..+++. +...+|++||+++. + ++
T Consensus 46 ~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~~ 106 (290)
T 2xyq_A 46 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------SD 106 (290)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------CS
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------CC
Confidence 4666665541 223355679999999 5577 334444 33579999999998 1 25
Q ss_pred EEE-EEcchhhHHhhCCCCCeeEEEEcCCCCCC------Ccc-ccchHHHHHHHHHhccCCCeEEec
Q 016578 216 VRL-HIGDAVEFLRQVPRGKYDAIIVDSSDPVG------PAQ-ELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 216 v~v-~~gD~~~~l~~~~~~~fDvII~D~~dp~~------~~~-~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+++ +.+|+.+.. . .++||+|++|...+.. ... ..+..++++.+.+.|+|||.|++.
T Consensus 107 v~~~i~gD~~~~~--~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 107 ADSTLIGDCATVH--T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp SSEEEESCGGGCC--C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEEECccccCC--c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 778 999987642 1 3589999998653321 000 112246899999999999999973
No 253
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.70 E-value=8e-08 Score=92.98 Aligned_cols=91 Identities=26% Similarity=0.290 Sum_probs=71.6
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
.+.+++..+.. ....+|||+|||+|+.+..+++..+..+|+++|+|+.+++.|++++... ..+++++.+|..
T Consensus 14 Ll~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~-----g~~v~~v~~d~~ 85 (301)
T 1m6y_A 14 MVREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF-----SDRVSLFKVSYR 85 (301)
T ss_dssp THHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG-----TTTEEEEECCGG
T ss_pred HHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEECCHH
Confidence 35667666542 3567999999999999999998855579999999999999999998754 258999999987
Q ss_pred hH---HhhCCCCCeeEEEEcCC
Q 016578 225 EF---LRQVPRGKYDAIIVDSS 243 (387)
Q Consensus 225 ~~---l~~~~~~~fDvII~D~~ 243 (387)
++ +.+...++||.|++|..
T Consensus 86 ~l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 86 EADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp GHHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHHhcCCCCCCEEEEcCc
Confidence 64 22221257999999874
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.70 E-value=4.8e-08 Score=97.66 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=82.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCC--------------------------------------ceEEEEeCCHHHHHHH
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSV--------------------------------------ELIDICEIDKMVIDVS 200 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~--------------------------------------~~Vt~VEiD~~vi~~a 200 (387)
.....|||.+||+|.++.+++..... .+|+++|+|+.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 44568999999999999998864221 3699999999999999
Q ss_pred HhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccC--CCeEEecc
Q 016578 201 KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRP--GGVLCNMA 275 (387)
Q Consensus 201 r~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~Lkp--gGvlv~q~ 275 (387)
++++... ++. .+++++.+|+.++.. .++||+||+|++........--..++|+.+.+.|++ ||.+.+.+
T Consensus 273 r~Na~~~--gl~-~~I~~~~~D~~~l~~---~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 273 RKNAREV--GLE-DVVKLKQMRLQDFKT---NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHT--TCT-TTEEEEECCGGGCCC---CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHc--CCC-CceEEEECChHHCCc---cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 9998655 233 379999999988632 358999999987644322211234578888888876 88766543
No 255
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.70 E-value=2.7e-08 Score=97.45 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=75.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+...+|||||||+|..+..+++..+..+++++|+ +.+++.++++ ++++++.+|.++. .+ .||+|
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~p--~~D~v 250 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFTS---IP--NADAV 250 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTTC---CC--CCSEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccCC---CC--CccEE
Confidence 4567999999999999999998766679999999 9998877652 3599999998652 22 39999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccC---CCeEEec
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRP---GGVLCNM 274 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~Lkp---gGvlv~q 274 (387)
++...-+..+.. -...+++.++++|+| ||.+++.
T Consensus 251 ~~~~~lh~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 251 LLKYILHNWTDK--DCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred EeehhhccCCHH--HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 976543222211 123689999999999 9988754
No 256
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.69 E-value=2e-08 Score=95.95 Aligned_cols=110 Identities=16% Similarity=0.188 Sum_probs=74.6
Q ss_pred CCCEEEEEcCcccH----HHHHHHhc-CC---CceEEEEeCCHHHHHHHHhhcccc-c--------------------CC
Q 016578 160 SPKTVLVVGGGDGG----VLREISRH-DS---VELIDICEIDKMVIDVSKKYFPEL-A--------------------VG 210 (387)
Q Consensus 160 ~p~~VL~IG~G~G~----~~~el~k~-~~---~~~Vt~VEiD~~vi~~ar~~~~~~-~--------------------~~ 210 (387)
++.+||++|||+|. ++..+++. +. ..+|+++|||+.+++.|++..... . .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 55556654 21 248999999999999999864110 0 00
Q ss_pred -C--C---CCCEEEEEcchhhHHhhCC-CCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 211 -F--E---DPRVRLHIGDAVEFLRQVP-RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 211 -~--~---d~rv~v~~gD~~~~l~~~~-~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
+ . ..+|++..+|..+. ..+ .++||+|++-..-..-. .-.....++.++++|+|||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~~~~~fDlI~crnvliyf~--~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYNVPGPFDAIFCRNVMIYFD--KTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCCCCCCEEEEEECSSGGGSC--HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCC--CCCcCCCeeEEEECCchHhCC--HHHHHHHHHHHHHHhCCCcEEEE
Confidence 0 0 03799999998762 111 35899999843211111 11135789999999999999986
No 257
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.69 E-value=3.1e-08 Score=99.25 Aligned_cols=111 Identities=12% Similarity=0.129 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCC--------------------------------------ceEEEEeCCHHHHHHH
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSV--------------------------------------ELIDICEIDKMVIDVS 200 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~--------------------------------------~~Vt~VEiD~~vi~~a 200 (387)
.....|||++||+|.++.+++..... .+|+++|+|+.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 44568999999999999998865221 4699999999999999
Q ss_pred HhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccC--CCeEEecc
Q 016578 201 KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRP--GGVLCNMA 275 (387)
Q Consensus 201 r~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~Lkp--gGvlv~q~ 275 (387)
++++... ++. .+++++.+|+.++.. .++||+||+|++........-...++|+.+.+.|++ ||.+.+-+
T Consensus 280 r~Na~~~--gl~-~~I~~~~~D~~~~~~---~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 280 KQNAVEA--GLG-DLITFRQLQVADFQT---EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHT--TCT-TCSEEEECCGGGCCC---CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHc--CCC-CceEEEECChHhCCC---CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998654 222 379999999987632 358999999987543221111123577777777776 88766544
No 258
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.69 E-value=4.3e-08 Score=102.56 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..|.+|||||||+|.++..+++.+ .+||+||+++.+|+.||.+.... ...+++++++|+.+......+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g--a~V~giD~~~~~i~~a~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG--ATIVGIDFQQENINVCRALAEEN----PDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTS----TTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC--CEEEEECCCHHHHHHHHHHHHhc----CCCceEEEECCHHHHhhhccCCCccEE
Confidence 467899999999999999999985 68999999999999999987643 124799999999988765556789999
Q ss_pred EEc
Q 016578 239 IVD 241 (387)
Q Consensus 239 I~D 241 (387)
++-
T Consensus 139 ~~~ 141 (569)
T 4azs_A 139 IGL 141 (569)
T ss_dssp EEE
T ss_pred EEC
Confidence 964
No 259
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.67 E-value=1.1e-07 Score=90.76 Aligned_cols=87 Identities=16% Similarity=0.164 Sum_probs=67.2
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
-..++..+.. ... +|||||||+|.++..+++.. .+|++||+|+.+++.+++.++ +.+++++.+|+.+
T Consensus 36 ~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~ 102 (271)
T 3fut_A 36 LRRIVEAARP---FTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALL 102 (271)
T ss_dssp HHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGG
T ss_pred HHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhh
Confidence 3445554433 334 99999999999999999985 689999999999999999875 2589999999987
Q ss_pred HHhhCCCCCeeEEEEcCCCCC
Q 016578 226 FLRQVPRGKYDAIIVDSSDPV 246 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~ 246 (387)
+--.. ...+|.|+.+.+...
T Consensus 103 ~~~~~-~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 103 YPWEE-VPQGSLLVANLPYHI 122 (271)
T ss_dssp SCGGG-SCTTEEEEEEECSSC
T ss_pred CChhh-ccCccEEEecCcccc
Confidence 62211 126899998876544
No 260
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.65 E-value=2.8e-08 Score=100.08 Aligned_cols=81 Identities=20% Similarity=0.128 Sum_probs=66.6
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
..+|||+|||+|..+..+++.. .+|++||+|+.+++.|++++.....++ .+++++.+|+.+++.....++||+|++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 6799999999999999998874 699999999999999999987541122 479999999999875422347999999
Q ss_pred cCCCC
Q 016578 241 DSSDP 245 (387)
Q Consensus 241 D~~dp 245 (387)
|++..
T Consensus 170 DPPrr 174 (410)
T 3ll7_A 170 DPARR 174 (410)
T ss_dssp CCEEC
T ss_pred CCCCc
Confidence 97653
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.65 E-value=1.1e-07 Score=92.34 Aligned_cols=115 Identities=12% Similarity=0.047 Sum_probs=81.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCC-CCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~-~~~fD 236 (387)
....+|||+|||.|+.+..+++. .+..+|+++|+|+..++.+++++..+. + .+++++.+|+.++..... .++||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g--~--~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG--V--SCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT--C--CSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC--C--CeEEEEeCChHhcCccccccCCCC
Confidence 45679999999999999999885 345699999999999999999987652 2 479999999987643211 14799
Q ss_pred EEEEcCCC-CCCC----cc----------c-----cchHHHHHHHHHhccCCCeEEeccccc
Q 016578 237 AIIVDSSD-PVGP----AQ----------E-----LVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 237 vII~D~~d-p~~~----~~----------~-----L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
.|++|++- ..+. ++ . -.+.++++.+.+.|+ ||+|+..+.+.
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 99999763 1111 00 1 112356666766776 89888655543
No 262
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.65 E-value=4e-08 Score=94.69 Aligned_cols=87 Identities=21% Similarity=0.240 Sum_probs=63.8
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
....++..+.. ....+|||||||+|.++..+++.. .+|++||+|+.+++.+++++... + .++++++.+|+.
T Consensus 30 i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~La~~~--~~v~~vDi~~~~~~~a~~~~~~~--~--~~~v~~~~~D~~ 100 (299)
T 2h1r_A 30 ILDKIIYAAKI---KSSDIVLEIGCGTGNLTVKLLPLA--KKVITIDIDSRMISEVKKRCLYE--G--YNNLEVYEGDAI 100 (299)
T ss_dssp HHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHTTTS--SEEEEECSCHHHHHHHHHHHHHT--T--CCCEEC----CC
T ss_pred HHHHHHHhcCC---CCcCEEEEEcCcCcHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHc--C--CCceEEEECchh
Confidence 34455554432 456799999999999999999873 69999999999999999987543 1 258999999987
Q ss_pred hHHhhCCCCCeeEEEEcCCC
Q 016578 225 EFLRQVPRGKYDAIIVDSSD 244 (387)
Q Consensus 225 ~~l~~~~~~~fDvII~D~~d 244 (387)
++. ..+||+|++|.+.
T Consensus 101 ~~~----~~~~D~Vv~n~py 116 (299)
T 2h1r_A 101 KTV----FPKFDVCTANIPY 116 (299)
T ss_dssp SSC----CCCCSEEEEECCG
T ss_pred hCC----cccCCEEEEcCCc
Confidence 642 3479999998754
No 263
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.63 E-value=5e-08 Score=98.99 Aligned_cols=113 Identities=18% Similarity=0.186 Sum_probs=81.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC-------------CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD-------------SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 226 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~-------------~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~ 226 (387)
...+|||.|||+|+++..++++. ...+++++|+|+.++++|+.++... ++.+.+++++.+|....
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~--g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH--GIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHT--TCCSSCCSEEECCTTTS
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHh--CCCcCCCCEeeCCCCCC
Confidence 34599999999999999988752 2357999999999999999986543 22222678899997654
Q ss_pred HhhCCCCCeeEEEEcCCCCCCCc-c-c-----------cchHHHHHHHHHhccCCCeEEecccc
Q 016578 227 LRQVPRGKYDAIIVDSSDPVGPA-Q-E-----------LVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 227 l~~~~~~~fDvII~D~~dp~~~~-~-~-----------L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
. ..++||+|+.+++...... . . -....|++.+.+.|+|||.+++...+
T Consensus 249 ~---~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 249 E---PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp C---CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred c---ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 2 2348999999876532110 0 0 01247999999999999998765543
No 264
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.63 E-value=2.5e-08 Score=94.42 Aligned_cols=82 Identities=21% Similarity=0.172 Sum_probs=65.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCH-------HHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCC
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDK-------MVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR 232 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~-------~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~ 232 (387)
...+|||+|||+|..+..+++.. .+|+++|+++ .+++.++++...... ..+++++.+|+.+++...++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~---~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPETQDT---AARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH---HTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCC---ccCeEEEECCHHHHHHhhhc
Confidence 45699999999999999999874 5899999999 999999887654311 24699999999998764422
Q ss_pred --CCeeEEEEcCCCCC
Q 016578 233 --GKYDAIIVDSSDPV 246 (387)
Q Consensus 233 --~~fDvII~D~~dp~ 246 (387)
++||+|++|+..+.
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 58999999976543
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.61 E-value=1.2e-07 Score=89.52 Aligned_cols=86 Identities=15% Similarity=0.333 Sum_probs=66.3
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
...++..+.. ....+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.+
T Consensus 18 ~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 18 LQKIVSAIHP---QKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQ 86 (255)
T ss_dssp HHHHHHHHCC---CTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTT
T ss_pred HHHHHHhcCC---CCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHh
Confidence 3445555432 456799999999999999999874 6999999999999999998753 3689999999987
Q ss_pred H-HhhC-CCCCeeEEEEcCC
Q 016578 226 F-LRQV-PRGKYDAIIVDSS 243 (387)
Q Consensus 226 ~-l~~~-~~~~fDvII~D~~ 243 (387)
+ +.+. .++.|| ||.+.+
T Consensus 87 ~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 87 FDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp CCGGGSCCSSCEE-EEEECC
T ss_pred CCHHHhccCCCeE-EEecCC
Confidence 6 2222 134688 777664
No 266
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.61 E-value=6.4e-08 Score=90.83 Aligned_cols=101 Identities=15% Similarity=0.135 Sum_probs=75.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
+.|.+|||||||.|-++..+. +..+++++|||+.+++.+++++... .+++++.++|...- ...++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~~---~~~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLCA---PPAEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTTS---CCCCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeecccC---CCCCCcchH
Confidence 568899999999999998877 5679999999999999999997654 46889999996542 235689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
++...-|.- ++.-....+ .+.+.|+++|+++.
T Consensus 173 Lllk~lh~L--E~q~~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 173 LIFKLLPLL--EREQAGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp EEESCHHHH--HHHSTTHHH-HHHHHCBCSEEEEE
T ss_pred HHHHHHHHh--hhhchhhHH-HHHHHhcCCCEEEE
Confidence 865432211 111112244 67779999999884
No 267
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.56 E-value=1.2e-07 Score=91.00 Aligned_cols=108 Identities=13% Similarity=0.069 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC-----CCceEEEEeCCHH--------------------------HHHHHHhhcccc
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD-----SVELIDICEIDKM--------------------------VIDVSKKYFPEL 207 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~-----~~~~Vt~VEiD~~--------------------------vi~~ar~~~~~~ 207 (387)
..|++||+||+..|..+..++... +..+|+++|..+. .++.++++|...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 468899999999999998876531 2578999996421 366788888765
Q ss_pred cCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 208 AVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 208 ~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
++..++++++.||+.+.+.+.+.++||+|++|+.. . ..+.++|+.+...|+|||++++.
T Consensus 185 --gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y----~~~~~~Le~~~p~L~pGGiIv~D 243 (282)
T 2wk1_A 185 --DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--Y----ESTWDTLTNLYPKVSVGGYVIVD 243 (282)
T ss_dssp --TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--H----HHHHHHHHHHGGGEEEEEEEEES
T ss_pred --CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--c----ccHHHHHHHHHhhcCCCEEEEEc
Confidence 44446999999999998877655789999999731 1 12467899999999999999974
No 268
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.55 E-value=4e-07 Score=84.96 Aligned_cols=86 Identities=13% Similarity=0.281 Sum_probs=64.2
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
...++..+. .....+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.+
T Consensus 19 ~~~i~~~~~---~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~ 87 (244)
T 1qam_A 19 IDKIMTNIR---LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQ 87 (244)
T ss_dssp HHHHHTTCC---CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGG
T ss_pred HHHHHHhCC---CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHh
Confidence 344444443 2456799999999999999999885 6999999999999999998753 2589999999887
Q ss_pred HHhhCCCCCeeEEEEcCCC
Q 016578 226 FLRQVPRGKYDAIIVDSSD 244 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~d 244 (387)
+... ....| .|+.+.+.
T Consensus 88 ~~~~-~~~~~-~vv~nlPy 104 (244)
T 1qam_A 88 FKFP-KNQSY-KIFGNIPY 104 (244)
T ss_dssp CCCC-SSCCC-EEEEECCG
T ss_pred CCcc-cCCCe-EEEEeCCc
Confidence 5211 12345 56766643
No 269
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.54 E-value=6.4e-08 Score=91.73 Aligned_cols=83 Identities=12% Similarity=0.095 Sum_probs=65.9
Q ss_pred CEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccC--CCCC---CCEEEEEcchhhHHhhCCCCCee
Q 016578 162 KTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV--GFED---PRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~--~~~d---~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
.+|||+|||.|..+.++++.. .+|++||+++.+++++++.+..... ..++ .+++++.+|+.++++..+ ++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~-~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT-PRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS-SCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc-ccCC
Confidence 799999999999999999884 4799999999998888877643311 0111 479999999999987653 4799
Q ss_pred EEEEcCCCCCC
Q 016578 237 AIIVDSSDPVG 247 (387)
Q Consensus 237 vII~D~~dp~~ 247 (387)
+|++|+..+..
T Consensus 167 vV~lDP~y~~~ 177 (258)
T 2oyr_A 167 VVYLDPMFPHK 177 (258)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEcCCCCCc
Confidence 99999876553
No 270
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.52 E-value=1.3e-07 Score=92.64 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=73.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
...+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|.++ .. + .||+|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~-~-~~D~v~ 256 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFK---SI-P-SADAVL 256 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTT---CC-C-CCSEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------CCCcEEEeCccCC---CC-C-CceEEE
Confidence 567999999999999999999866679999999 788876654 1469999999865 22 2 499999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhccC---CCeEEec
Q 016578 240 VDSSDPVGPAQELVEKPFFDTIAKALRP---GGVLCNM 274 (387)
Q Consensus 240 ~D~~dp~~~~~~L~~~ef~~~l~~~Lkp---gGvlv~q 274 (387)
+...-+..+.. ....+++.++++|+| ||.+++.
T Consensus 257 ~~~vlh~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 257 LKWVLHDWNDE--QSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred EcccccCCCHH--HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 76543322211 123689999999999 9987753
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.51 E-value=4.5e-07 Score=85.23 Aligned_cols=109 Identities=18% Similarity=0.292 Sum_probs=74.3
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
...++..+.. ....+|||||||+|.++..+++.+ ..+|++||+|+.+++.++++ + ..+++++.+|+.+
T Consensus 20 ~~~iv~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 20 LKKIAEELNI---EEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G-------DERLEVINEDASK 87 (249)
T ss_dssp HHHHHHHTTC---CTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTT
T ss_pred HHHHHHhcCC---CCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhh
Confidence 3455555432 456799999999999999999883 47999999999999999887 3 3589999999987
Q ss_pred HH-hhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHh--ccCCCeEEecc
Q 016578 226 FL-RQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKA--LRPGGVLCNMA 275 (387)
Q Consensus 226 ~l-~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~--LkpgGvlv~q~ 275 (387)
+- .+. .+.| .|+.+.+... +.+.+..+.+. .-+.+++++|-
T Consensus 88 ~~~~~~-~~~~-~vv~NlPy~i-------~~~il~~ll~~~~~~~~~~~m~Qk 131 (249)
T 3ftd_A 88 FPFCSL-GKEL-KVVGNLPYNV-------ASLIIENTVYNKDCVPLAVFMVQK 131 (249)
T ss_dssp CCGGGS-CSSE-EEEEECCTTT-------HHHHHHHHHHTGGGCSEEEEEEEH
T ss_pred CChhHc-cCCc-EEEEECchhc-------cHHHHHHHHhcCCCCceEEEEEeH
Confidence 52 222 1234 7777775432 22233333332 23556666664
No 272
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.50 E-value=6e-09 Score=97.13 Aligned_cols=116 Identities=18% Similarity=0.323 Sum_probs=80.3
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
.+..++..+.. .+..+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.
T Consensus 17 ~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~------~~~v~~~~~D~~ 85 (245)
T 1yub_A 17 VLNQIIKQLNL---KETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL------NTRVTLIHQDIL 85 (245)
T ss_dssp THHHHHHHCCC---CSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT------CSEEEECCSCCT
T ss_pred HHHHHHHhcCC---CCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc------CCceEEEECChh
Confidence 45566665543 456699999999999999999885 7999999999999999887641 358999999988
Q ss_pred hHHhhCC-CCCeeEEEEcCCCCCCCcc--c-----cchHHHH----HHHHHhccCCCeEEec
Q 016578 225 EFLRQVP-RGKYDAIIVDSSDPVGPAQ--E-----LVEKPFF----DTIAKALRPGGVLCNM 274 (387)
Q Consensus 225 ~~l~~~~-~~~fDvII~D~~dp~~~~~--~-----L~~~ef~----~~l~~~LkpgGvlv~q 274 (387)
++. .+ +++| .|+++.+....... . .....++ +.+.+.|+|||.+++.
T Consensus 86 ~~~--~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 86 QFQ--FPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp TTT--CCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred hcC--cccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 752 22 2578 77777654322100 0 0011123 5677888888876653
No 273
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.50 E-value=1.5e-06 Score=84.10 Aligned_cols=143 Identities=19% Similarity=0.139 Sum_probs=91.2
Q ss_pred CEEEEEcCcccHHHHHHH----hcCCCceE--EEEeCCH------------HHHHHHHhhcccccCCCCCC--CEEEEEc
Q 016578 162 KTVLVVGGGDGGVLREIS----RHDSVELI--DICEIDK------------MVIDVSKKYFPELAVGFEDP--RVRLHIG 221 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~----k~~~~~~V--t~VEiD~------------~vi~~ar~~~~~~~~~~~d~--rv~v~~g 221 (387)
-+||++|.|+|....... +..+..++ +.+|.++ ++.+......+.. ++. .++++.+
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~----~~~~v~L~l~~G 173 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY----EGERLSLKVLLG 173 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE----ECSSEEEEEEES
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc----cCCcEEEEEEec
Confidence 489999999998654433 33344445 4555432 1112222222222 233 4568899
Q ss_pred chhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcc
Q 016578 222 DAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVH 301 (387)
Q Consensus 222 D~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~ 301 (387)
|+.+.+++....+||+|+.|.+.|... ..|++.++|+.++++++|||++++-+.. ..+.+.|+++ .
T Consensus 174 Da~~~l~~l~~~~~Da~flDgFsP~kN-PeLWs~e~f~~l~~~~~pgg~laTYtaa--------g~VRR~L~~a-----G 239 (308)
T 3vyw_A 174 DARKRIKEVENFKADAVFHDAFSPYKN-PELWTLDFLSLIKERIDEKGYWVSYSSS--------LSVRKSLLTL-----G 239 (308)
T ss_dssp CHHHHGGGCCSCCEEEEEECCSCTTTS-GGGGSHHHHHHHHTTEEEEEEEEESCCC--------HHHHHHHHHT-----T
T ss_pred hHHHHHhhhcccceeEEEeCCCCcccC-cccCCHHHHHHHHHHhCCCcEEEEEeCc--------HHHHHHHHHC-----C
Confidence 999999876545899999999877654 4699999999999999999999975432 2333445544 2
Q ss_pred eEEEEeeccCCCcEEEEEEecC
Q 016578 302 YAWASVPTYPSGIIGFLICSTE 323 (387)
Q Consensus 302 ~~~~~iPtyp~g~~gf~~ask~ 323 (387)
+....+|-|+ +-.-.++|+++
T Consensus 240 F~V~k~~G~g-~KReml~A~~~ 260 (308)
T 3vyw_A 240 FKVGSSREIG-RKRKGTVASLK 260 (308)
T ss_dssp CEEEEEECC----CEEEEEESS
T ss_pred CEEEecCCCC-CCCceeEEecC
Confidence 2234677774 34566778775
No 274
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.46 E-value=2e-07 Score=81.56 Aligned_cols=90 Identities=21% Similarity=0.244 Sum_probs=67.6
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCee
Q 016578 158 IPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYD 236 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~fD 236 (387)
.....+||+||||. +.+|+++.+++.|++.++ .+++++.+|+.+.... .++++||
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGGGCCCSSCEE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc--------cCcEEEEechhcCccccCCCCCEe
Confidence 45678999999985 239999999999999864 2489999999875321 1357899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+|++...-.....+ ...+++.++++|||||.+++.
T Consensus 66 ~V~~~~~l~~~~~~---~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 66 IILSGLVPGSTTLH---SAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEEECCSTTCCCCC---CHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECChhhhcccC---HHHHHHHHHHHCCCCEEEEEE
Confidence 99985443322111 257999999999999999874
No 275
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.46 E-value=1.8e-07 Score=97.52 Aligned_cols=135 Identities=10% Similarity=0.016 Sum_probs=90.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCC---------------CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcch
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDS---------------VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA 223 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~---------------~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~ 223 (387)
+.+.+|||.+||+|+++..++++.. ..++.++|+|+.++++|+.++... +++ .++.++.+|.
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~--gi~-~~i~i~~gDt 319 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR--GID-FNFGKKNADS 319 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT--TCC-CBCCSSSCCT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh--CCC-cccceeccch
Confidence 3445999999999999988765311 358999999999999999987543 222 2455578886
Q ss_pred hhHHhhCCCCCeeEEEEcCCCCCC---C----------------------ccccchHHHHHHHHHhccCCCeEEeccccc
Q 016578 224 VEFLRQVPRGKYDAIIVDSSDPVG---P----------------------AQELVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 224 ~~~l~~~~~~~fDvII~D~~dp~~---~----------------------~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
+.... ....+||+||++++.... . ...-..-.|++.+.+.|+|||++++...+.
T Consensus 320 L~~~~-~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 320 FLDDQ-HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TTSCS-CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred hcCcc-cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 54321 124689999999876421 0 000011259999999999999987665544
Q ss_pred chhh--hHHHHHHHHHHHHcC
Q 016578 279 WLHT--HLIEDMISICRETFK 297 (387)
Q Consensus 279 ~~~~--~~~~~~~~~l~~~F~ 297 (387)
++.. .....+.+.+-+.+.
T Consensus 399 ~L~~~~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 399 SMSSNTNNEGEIRKTLVEQDL 419 (544)
T ss_dssp HHHCCGGGHHHHHHHHHHTTC
T ss_pred hhhcCcchHHHHHHHHHhCCc
Confidence 4432 244566666655543
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.41 E-value=5.3e-07 Score=96.69 Aligned_cols=115 Identities=14% Similarity=0.157 Sum_probs=78.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcC------------------------------------------CCceEEEEeCCHHH
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHD------------------------------------------SVELIDICEIDKMV 196 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~------------------------------------------~~~~Vt~VEiD~~v 196 (387)
.....|||.+||+|.++.+++... ...+|+++|+|+.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 345689999999999999987641 11479999999999
Q ss_pred HHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhc---cCCCeEEe
Q 016578 197 IDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKAL---RPGGVLCN 273 (387)
Q Consensus 197 i~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~L---kpgGvlv~ 273 (387)
++.|++++... ++. ..+++..+|+.++......++||+||+|++........---.++|+.+.+.| .|||.+.+
T Consensus 269 v~~A~~N~~~a--gv~-~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 269 IQRARTNARLA--GIG-ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHT--TCG-GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHc--CCC-CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 99999997654 222 3699999999875322212379999999876432211111234566555544 47998776
Q ss_pred ccc
Q 016578 274 MAE 276 (387)
Q Consensus 274 q~~ 276 (387)
.+.
T Consensus 346 lt~ 348 (703)
T 3v97_A 346 FSA 348 (703)
T ss_dssp EES
T ss_pred EeC
Confidence 443
No 277
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.40 E-value=5.8e-07 Score=93.61 Aligned_cols=134 Identities=13% Similarity=0.043 Sum_probs=89.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC---C---------------CceEEEEeCCHHHHHHHHhhcccccCCCCC---CCEEE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD---S---------------VELIDICEIDKMVIDVSKKYFPELAVGFED---PRVRL 218 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~---~---------------~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d---~rv~v 218 (387)
...+|||.+||+|+++..++++. . ..+++++|+|+.++++|+.++... +..+ .++++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~--gi~~~~~~~~~I 246 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH--DIEGNLDHGGAI 246 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT--TCCCBGGGTBSE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh--CCCccccccCCe
Confidence 34599999999999998887641 0 237999999999999999886433 1221 13788
Q ss_pred EEcchhhHHhhCCCCCeeEEEEcCCCCCCCcc----------ccchHHHHHHHHHhccCCCeEEecccccchh-hhHHHH
Q 016578 219 HIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQ----------ELVEKPFFDTIAKALRPGGVLCNMAESMWLH-THLIED 287 (387)
Q Consensus 219 ~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~----------~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~-~~~~~~ 287 (387)
+.+|.+..... ..++||+|+.+++....... .-....|++.+.+.|+|||++++...+.++. ......
T Consensus 247 ~~gDtL~~~~~-~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~ 325 (541)
T 2ar0_A 247 RLGNTLGSDGE-NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTD 325 (541)
T ss_dssp EESCTTSHHHH-TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHH
T ss_pred EeCCCcccccc-cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHH
Confidence 99998764322 24589999999765322110 1112369999999999999988765444432 223345
Q ss_pred HHHHHHHHc
Q 016578 288 MISICRETF 296 (387)
Q Consensus 288 ~~~~l~~~F 296 (387)
+.+.+.+.+
T Consensus 326 iR~~L~~~~ 334 (541)
T 2ar0_A 326 IRRDLMDKC 334 (541)
T ss_dssp HHHHHHHHE
T ss_pred HHHHHhhcC
Confidence 555555543
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.38 E-value=1.7e-06 Score=90.03 Aligned_cols=135 Identities=13% Similarity=0.060 Sum_probs=93.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhc---CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHH-hhCCCCCe
Q 016578 160 SPKTVLVVGGGDGGVLREISRH---DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL-RQVPRGKY 235 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~---~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l-~~~~~~~f 235 (387)
...+|||.+||+|+++..++++ ....+++++|+|+.++++|+.++-.. +...++++++.+|.+..- ......+|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~--gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH--GVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc--CCCcCccceEecceecccccccccccc
Confidence 3559999999999999998876 23568999999999999999986433 333357899999976530 11224689
Q ss_pred eEEEEcCCCCCC--Cccc-----c---c---------hHHHHHHHHHhcc-CCCeEEecccccchh-hhHHHHHHHHHHH
Q 016578 236 DAIIVDSSDPVG--PAQE-----L---V---------EKPFFDTIAKALR-PGGVLCNMAESMWLH-THLIEDMISICRE 294 (387)
Q Consensus 236 DvII~D~~dp~~--~~~~-----L---~---------~~ef~~~l~~~Lk-pgGvlv~q~~s~~~~-~~~~~~~~~~l~~ 294 (387)
|+||.+++.... .... - + .-.|++.+.+.|+ |||++++...+.++. ......+.+.+-+
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle 378 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLE 378 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHh
Confidence 999999775321 1000 0 1 1348999999999 999987665555543 2234556666555
Q ss_pred Hc
Q 016578 295 TF 296 (387)
Q Consensus 295 ~F 296 (387)
.+
T Consensus 379 ~~ 380 (542)
T 3lkd_A 379 EG 380 (542)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 279
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.38 E-value=3.2e-06 Score=83.70 Aligned_cols=135 Identities=14% Similarity=0.175 Sum_probs=96.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCC--CCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVG--FEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~--~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
....+|||+.+|.|+=+..++.......|+++|+|+.-++..++++...... ....++.+...|+..+-... .++||
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~-~~~fD 225 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE-GDTYD 225 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-TTCEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-cccCC
Confidence 3456999999999999999988766678999999999999998887654210 12357999999999875443 56899
Q ss_pred EEEEcCCCCC---C---C-cc-------------ccchHHHHHHHHHhccCCCeEEecccccch--hhhHHHHHHHHHHH
Q 016578 237 AIIVDSSDPV---G---P-AQ-------------ELVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISICRE 294 (387)
Q Consensus 237 vII~D~~dp~---~---~-~~-------------~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--~~~~~~~~~~~l~~ 294 (387)
.|++|++-.. + . +. .-.+.+.++.+.+.|||||+|+-.+.|... +...+..+++....
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~ 305 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 305 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCC
Confidence 9999976321 1 0 00 013467888899999999999966655433 33455555554443
No 280
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.35 E-value=1.3e-06 Score=83.64 Aligned_cols=123 Identities=18% Similarity=0.137 Sum_probs=93.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC--CCCCeeE
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV--PRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~--~~~~fDv 237 (387)
++..+|++=+|+|.++.++++. ..+++.||.++..++..++++.. +.+++++..|+.+.++.. +..+||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 4667999999999999999983 38999999999999999999863 468999999999988753 2347999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHH--hccCCCeEEecccccchhhhHHHHHHHHHHHHc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAK--ALRPGGVLCNMAESMWLHTHLIEDMISICRETF 296 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~--~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F 296 (387)
|++|++..... . ....++.+.+ .+.|+|+++++- |.........+.+.+++.-
T Consensus 163 VfiDPPYe~k~---~-~~~vl~~L~~~~~r~~~Gi~v~WY--Pi~~~~~~~~~~~~l~~~~ 217 (283)
T 2oo3_A 163 IFIDPSYERKE---E-YKEIPYAIKNAYSKFSTGLYCVWY--PVVNKAWTEQFLRKMREIS 217 (283)
T ss_dssp EEECCCCCSTT---H-HHHHHHHHHHHHHHCTTSEEEEEE--EESSHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCc---H-HHHHHHHHHHhCccCCCeEEEEEE--eccchHHHHHHHHHHHhcC
Confidence 99998764211 1 1223444444 567899999854 4455666778888887553
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.32 E-value=1.8e-06 Score=92.98 Aligned_cols=136 Identities=11% Similarity=0.134 Sum_probs=87.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCC---CceEEEEeCCHHHHHHH--HhhcccccCCCCCCCEEEEEcchhhHHhhCCCCC
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDS---VELIDICEIDKMVIDVS--KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK 234 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~---~~~Vt~VEiD~~vi~~a--r~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~ 234 (387)
...+|||.|||+|+++..++++.+ ..+++++|||+.+++.| +.++.............+...|....- ....++
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~-~~~~~k 399 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN-PEDFAN 399 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC-GGGGTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc-ccccCC
Confidence 467999999999999999988643 35899999999999999 554432100001122456666655421 112458
Q ss_pred eeEEEEcCCCCCC-C-ccc-----------------------cchHHHHHHHHHhccCCCeEEecccccchh--hhHHHH
Q 016578 235 YDAIIVDSSDPVG-P-AQE-----------------------LVEKPFFDTIAKALRPGGVLCNMAESMWLH--THLIED 287 (387)
Q Consensus 235 fDvII~D~~dp~~-~-~~~-----------------------L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~--~~~~~~ 287 (387)
||+||.+++.... . ... -....|++.+.+.|+|||.+++...+.|+. ....+.
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 9999999876321 1 000 012358899999999999998776666653 223455
Q ss_pred HHHHHHHHc
Q 016578 288 MISICRETF 296 (387)
Q Consensus 288 ~~~~l~~~F 296 (387)
+.+.+.+.+
T Consensus 480 LRk~LLe~~ 488 (878)
T 3s1s_A 480 FREFLVGNF 488 (878)
T ss_dssp HHHHHTTTT
T ss_pred HHHHHHhCC
Confidence 555554444
No 282
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.25 E-value=2.3e-06 Score=81.82 Aligned_cols=87 Identities=21% Similarity=0.317 Sum_probs=62.3
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCC--ceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcch
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSV--ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA 223 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~--~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~ 223 (387)
...++..+.. ....+|||||||+|.++..+++.... .+|++||+|+.+++.+++++ .++++++.+|+
T Consensus 31 ~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--------~~~v~~i~~D~ 99 (279)
T 3uzu_A 31 IDAIVAAIRP---ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--------GELLELHAGDA 99 (279)
T ss_dssp HHHHHHHHCC---CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--------GGGEEEEESCG
T ss_pred HHHHHHhcCC---CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--------CCCcEEEECCh
Confidence 3455555432 45679999999999999999987421 23999999999999999983 14899999999
Q ss_pred hhHH-hhCCC-C--CeeEEEEcCC
Q 016578 224 VEFL-RQVPR-G--KYDAIIVDSS 243 (387)
Q Consensus 224 ~~~l-~~~~~-~--~fDvII~D~~ 243 (387)
.++- .+..+ . ..+.||.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 100 LTFDFGSIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp GGCCGGGGSCSSSSCCEEEEEECC
T ss_pred hcCChhHhcccccCCceEEEEccC
Confidence 8752 22111 1 2346777664
No 283
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.25 E-value=1.4e-06 Score=82.06 Aligned_cols=89 Identities=10% Similarity=0.172 Sum_probs=62.4
Q ss_pred HHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh
Q 016578 145 AYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV 224 (387)
Q Consensus 145 ~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~ 224 (387)
.-..++..+.. ....+|||||||+|.++. +.+ ....+|++||+|+.+++.+++++... ++++++.+|+.
T Consensus 9 i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~------~~v~~i~~D~~ 77 (252)
T 1qyr_A 9 VIDSIVSAINP---QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG------PKLTIYQQDAM 77 (252)
T ss_dssp HHHHHHHHHCC---CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG------GGEEEECSCGG
T ss_pred HHHHHHHhcCC---CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC------CceEEEECchh
Confidence 33455555432 345689999999999999 654 32123999999999999999987532 58999999998
Q ss_pred hH-HhhCC--CCCeeEEEEcCCC
Q 016578 225 EF-LRQVP--RGKYDAIIVDSSD 244 (387)
Q Consensus 225 ~~-l~~~~--~~~fDvII~D~~d 244 (387)
++ +.+.. .+..|.|+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 78 TFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp GCCHHHHHHHHTSCEEEEEECCT
T ss_pred hCCHHHhhcccCCceEEEECCCC
Confidence 74 22110 1245788877754
No 284
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.23 E-value=2.1e-06 Score=81.66 Aligned_cols=161 Identities=12% Similarity=0.097 Sum_probs=98.1
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
-.|+... .+ .....+|||||||.|+.+..+++..++.+|+++|+..+.. .-+.....+ +.++..+.+|...
T Consensus 63 L~ei~ek-~~--l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~~~dv 133 (277)
T 3evf_A 63 LRWFHER-GY--VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKDKTDI 133 (277)
T ss_dssp HHHHHHT-TS--SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEECSCCT
T ss_pred HHHHHHh-CC--CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEecccee
Confidence 3566655 22 2455689999999999999998876678899998874420 001110001 1234445554311
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCc--cccchHHHHHHHHHhccCC-CeEEecccccchhhhHHHHHHHHHHHHcCCCcce
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPG-GVLCNMAESMWLHTHLIEDMISICRETFKGSVHY 302 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~--~~L~~~ef~~~l~~~Lkpg-Gvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~ 302 (387)
....+++||+|++|.....+.. ++.-+...++.+.+.|+|| |.|++-.-.|+ ......+++.++..|. .|.
T Consensus 134 --~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py--g~~~~~l~~~lk~~F~-~V~- 207 (277)
T 3evf_A 134 --HRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY--MPDVLEKLELLQRRFG-GTV- 207 (277)
T ss_dssp --TTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT--SHHHHHHHHHHHHHHC-CEE-
T ss_pred --hhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC--CccHHHHHHHHHHhcC-CEE-
Confidence 1234568999999976543321 2222233478889999999 99997442222 3456788899999998 443
Q ss_pred EEEEeec-cCCCcEEEEEEecC
Q 016578 303 AWASVPT-YPSGIIGFLICSTE 323 (387)
Q Consensus 303 ~~~~iPt-yp~g~~gf~~ask~ 323 (387)
+.-|. -.+..--|++|...
T Consensus 208 --~~KPaSR~~S~E~Y~V~~~r 227 (277)
T 3evf_A 208 --IRNPLSRNSTHEMYYVSGAR 227 (277)
T ss_dssp --ECCTTSCTTCCCEEEESSCC
T ss_pred --EEeCCCCCCCCceEEEEecC
Confidence 34561 11223468887654
No 285
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.18 E-value=2.1e-06 Score=90.77 Aligned_cols=108 Identities=16% Similarity=0.155 Sum_probs=74.2
Q ss_pred CCEEEEEcCcccHHHHHHHh---cC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 161 PKTVLVVGGGDGGVLREISR---HD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k---~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
.+.|||+|+|+|-+....++ .. ...+|.+||-++. ...+++..... +++ .+|+++.+|.+++ +. +++.|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N--~~~-dkVtVI~gd~eev--~L-PEKVD 430 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFE--EWG-SQVTVVSSDMREW--VA-PEKAD 430 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHH--TTG-GGEEEEESCTTTC--CC-SSCEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhc--cCC-CeEEEEeCcceec--cC-CcccC
Confidence 34799999999999555443 22 1227899999985 55666655433 343 4899999999886 33 46999
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
+||+..-......+. . .+.+....+.|||||+++=+..+
T Consensus 431 IIVSEwMG~fLl~E~-m-levL~Ardr~LKPgGimiPs~at 469 (637)
T 4gqb_A 431 IIVSELLGSFADNEL-S-PECLDGAQHFLKDDGVSIPGEYT 469 (637)
T ss_dssp EEECCCCBTTBGGGC-H-HHHHHHHGGGEEEEEEEESCEEE
T ss_pred EEEEEcCcccccccC-C-HHHHHHHHHhcCCCcEEccccce
Confidence 999766543333222 2 35777778899999999854433
No 286
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.12 E-value=3e-06 Score=80.75 Aligned_cols=161 Identities=13% Similarity=0.065 Sum_probs=97.5
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
-.|+.... + .....+|||||||.|+.+..+++..++.+|+++|+.......+. +. ..+ +.++.....+..
T Consensus 79 L~ei~eK~-~--Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi---~~--~~~-g~~ii~~~~~~d- 148 (282)
T 3gcz_A 79 LRWMEERG-Y--VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPI---MR--TTL-GWNLIRFKDKTD- 148 (282)
T ss_dssp HHHHHHTT-S--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC---CC--CBT-TGGGEEEECSCC-
T ss_pred HHHHHHhc-C--CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccc---cc--ccC-CCceEEeeCCcc-
Confidence 35665554 2 24455999999999999999987667889999999765311110 00 001 223333332211
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCC--ccccchHHHHHHHHHhccCC--CeEEecccccchhhhHHHHHHHHHHHHcCCCcc
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGP--AQELVEKPFFDTIAKALRPG--GVLCNMAESMWLHTHLIEDMISICRETFKGSVH 301 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~--~~~L~~~ef~~~l~~~Lkpg--Gvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~ 301 (387)
+...+.+++|+|++|.....+. .++.-+.+.++.+.+.|+|| |.|++-.-.++ ......+++.++..|. .|.
T Consensus 149 -v~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~py--g~~~~~l~~~lk~~F~-~V~ 224 (282)
T 3gcz_A 149 -VFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPY--TPLIMEELSRLQLKHG-GGL 224 (282)
T ss_dssp -GGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCC--SHHHHHHHHHHHHHHC-CEE
T ss_pred -hhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCC--CccHHHHHHHHHHhcC-CEE
Confidence 1123457899999997654333 12222334577888999999 99997432221 4456788899999998 443
Q ss_pred eEEEEeec-cCCCcEEEEEEecC
Q 016578 302 YAWASVPT-YPSGIIGFLICSTE 323 (387)
Q Consensus 302 ~~~~~iPt-yp~g~~gf~~ask~ 323 (387)
+.-|. -.+..--|++|...
T Consensus 225 ---~~KPaSR~~S~E~Y~V~~~r 244 (282)
T 3gcz_A 225 ---VRVPLSRNSTHEMYWVSGTR 244 (282)
T ss_dssp ---ECCTTSCTTCCCEEEETTCC
T ss_pred ---EEcCCCcccCcceeEEEecC
Confidence 34561 11223468887654
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.10 E-value=1.5e-05 Score=76.23 Aligned_cols=85 Identities=19% Similarity=0.194 Sum_probs=67.6
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
.+|++..+.. .+...+||++||.|+.++.+++. ..+|+++|.|+.+++.+++ +.. +|++++++|..+
T Consensus 11 l~e~le~L~~---~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~-------~rv~lv~~~f~~ 77 (285)
T 1wg8_A 11 YQEALDLLAV---RPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL-------PGLTVVQGNFRH 77 (285)
T ss_dssp HHHHHHHHTC---CTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC-------TTEEEEESCGGG
T ss_pred HHHHHHhhCC---CCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc-------CCEEEEECCcch
Confidence 3566665532 34569999999999999999998 3699999999999999999 742 599999999877
Q ss_pred H---HhhCCCCCeeEEEEcCC
Q 016578 226 F---LRQVPRGKYDAIIVDSS 243 (387)
Q Consensus 226 ~---l~~~~~~~fDvII~D~~ 243 (387)
+ +.+...+++|.|+.|+.
T Consensus 78 l~~~L~~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 78 LKRHLAALGVERVDGILADLG 98 (285)
T ss_dssp HHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHHcCCCCcCEEEeCCc
Confidence 6 44443357999999853
No 288
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.08 E-value=4.4e-06 Score=88.74 Aligned_cols=113 Identities=18% Similarity=0.198 Sum_probs=77.0
Q ss_pred CCEEEEEcCcccHHHHHHHhc----C---------CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHH
Q 016578 161 PKTVLVVGGGDGGVLREISRH----D---------SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL 227 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~----~---------~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l 227 (387)
.+.|||||||+|.+...+++. . ...+|.+||.++..+...++... .+++ .+|+++.+|.+++-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~---Ng~~-d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV---RTWK-RRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH---HTTT-TCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh---cCCC-CeEEEEeCchhhcc
Confidence 357999999999996543221 1 23499999999977765555432 1344 48999999999873
Q ss_pred h---hCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccc
Q 016578 228 R---QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMW 279 (387)
Q Consensus 228 ~---~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~ 279 (387)
. ....++.|+||...-...+. .+| ..+.+..+.+.|+|||+++=+..+.+
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl~-nEL-~pe~Ld~v~r~Lkp~Gi~iP~~~t~y 538 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFGD-NEL-SPECLDGVTGFLKPTTISIPQKYTSY 538 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTBG-GGS-HHHHHHTTGGGSCTTCEEESCEEEEE
T ss_pred cccccCCCCcccEEEEeccccccc-hhc-cHHHHHHHHHhCCCCcEEECCccEEE
Confidence 2 11146899999876543332 222 45688888899999999985544433
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.94 E-value=4.1e-05 Score=73.43 Aligned_cols=160 Identities=11% Similarity=0.076 Sum_probs=97.5
Q ss_pred HHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEc-chh
Q 016578 146 YQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG-DAV 224 (387)
Q Consensus 146 Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~g-D~~ 224 (387)
-.|+... .++ ++.++||||||+.|+.+..+++..++..|+++|+...... .|.....+...-+.+..+ |.+
T Consensus 70 L~ei~ek-~l~--~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~-----~P~~~~~~~~~iv~~~~~~di~ 141 (300)
T 3eld_A 70 IRWLHER-GYL--RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE-----KPIHMQTLGWNIVKFKDKSNVF 141 (300)
T ss_dssp HHHHHHH-TSC--CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC-----CCCCCCBTTGGGEEEECSCCTT
T ss_pred HHHHHHh-CCC--CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc-----ccccccccCCceEEeecCceee
Confidence 3566655 443 5677999999999999999998766789999999653210 011000001112222211 322
Q ss_pred hHHhhCCCCCeeEEEEcCCCCCCCc--cccchHHHHHHHHHhccCC-CeEEecccccchhhhHHHHHHHHHHHHcCCCcc
Q 016578 225 EFLRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPG-GVLCNMAESMWLHTHLIEDMISICRETFKGSVH 301 (387)
Q Consensus 225 ~~l~~~~~~~fDvII~D~~dp~~~~--~~L~~~ef~~~l~~~Lkpg-Gvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~ 301 (387)
....+++|+|++|.....+.. ++.-+...++.+.+.|+|| |.|++-.-.++ ......++..++..|. .|.
T Consensus 142 ----~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y--G~~~~~ll~~lk~~F~-~V~ 214 (300)
T 3eld_A 142 ----TMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY--HPDVIEKLERLQLRFG-GGI 214 (300)
T ss_dssp ----TSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT--SHHHHHHHHHHHHHHC-CEE
T ss_pred ----ecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc--CccHHHHHHHHHHhCC-cEE
Confidence 223568999999976443321 2222334577888999999 99997532222 4466788899999998 443
Q ss_pred eEEEEee-ccCCCcEEEEEEecC
Q 016578 302 YAWASVP-TYPSGIIGFLICSTE 323 (387)
Q Consensus 302 ~~~~~iP-typ~g~~gf~~ask~ 323 (387)
+.-| +-++..--|++|...
T Consensus 215 ---~~KPaSR~~S~E~Y~V~~~r 234 (300)
T 3eld_A 215 ---VRVPFSRNSTHEMYYISGAR 234 (300)
T ss_dssp ---ECCTTSCTTCCCEEEESSCC
T ss_pred ---EEeCCCCCCChHHeeeccCC
Confidence 3455 122233468887654
No 290
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.83 E-value=7.7e-05 Score=79.13 Aligned_cols=113 Identities=22% Similarity=0.309 Sum_probs=84.2
Q ss_pred CEEEEEcCcccHHHHHHHhcC------------CCceEEEEeC---CHHHHHHHHhhcccc-----------cC------
Q 016578 162 KTVLVVGGGDGGVLREISRHD------------SVELIDICEI---DKMVIDVSKKYFPEL-----------AV------ 209 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~------------~~~~Vt~VEi---D~~vi~~ar~~~~~~-----------~~------ 209 (387)
-+|||+|.|+|.......+.. ...+++.+|. +++.+..+-..+|++ ..
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 389999999999887765431 1246899998 888887555544431 00
Q ss_pred --CCCC--CCEEEEEcchhhHHhhCC---CCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 210 --GFED--PRVRLHIGDAVEFLRQVP---RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 210 --~~~d--~rv~v~~gD~~~~l~~~~---~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.+++ -+++++.+|+.+.+++.. ..+||+|+.|.+.|... ..+++.++|+.+.++++|||.+++.+
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~n-p~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKN-PDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGC-GGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCC-hhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 0222 467789999999988653 35799999999876543 46999999999999999999999754
No 291
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.74 E-value=9e-05 Score=78.88 Aligned_cols=114 Identities=21% Similarity=0.292 Sum_probs=82.0
Q ss_pred CCEEEEEcCcccHHHHHHHhcC------------CCceEEEEeC---CHHHHHHHHhhccccc-----------------
Q 016578 161 PKTVLVVGGGDGGVLREISRHD------------SVELIDICEI---DKMVIDVSKKYFPELA----------------- 208 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~------------~~~~Vt~VEi---D~~vi~~ar~~~~~~~----------------- 208 (387)
+-+|||+|.|+|.....+.+.. ...+++.+|. +.+.+..+-..+|++.
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 3489999999999888775531 1257899999 5555554433333210
Q ss_pred --CCCCC--CCEEEEEcchhhHHhhCC---CCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 209 --VGFED--PRVRLHIGDAVEFLRQVP---RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 209 --~~~~d--~rv~v~~gD~~~~l~~~~---~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
..+++ -+++++.||+.+.+++.. ...+|+|++|.+.|... ..+++.++|..+.+.++|||.+++.+
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~n-p~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKN-PDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--C-CTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCC-hhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 01233 367899999999987653 36899999999877644 35899999999999999999999754
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.61 E-value=0.00033 Score=65.91 Aligned_cols=138 Identities=14% Similarity=0.163 Sum_probs=83.5
Q ss_pred hHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCE---EEEE
Q 016578 144 CAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRV---RLHI 220 (387)
Q Consensus 144 ~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv---~v~~ 220 (387)
|-..|+-..- + ..+..+||||||+-|+-+..+++..++..|.+..+-.+. .-.|-. ...+.+ ++..
T Consensus 60 yKL~EIdeK~-l--ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-----~~~P~~---~~~~Gv~~i~~~~ 128 (269)
T 2px2_A 60 AKLRWLVERR-F--VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-----HEEPML---MQSYGWNIVTMKS 128 (269)
T ss_dssp HHHHHHHHTT-S--CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-----SCCCCC---CCSTTGGGEEEEC
T ss_pred HHHHHHHHcC-C--CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-----ccCCCc---ccCCCceEEEeec
Confidence 3336666653 3 355779999999999999999987445455555443321 001110 001334 4444
Q ss_pred c-chhhHHhhCCCCCeeEEEEcCCCCCCCc--cccchHHHHHHHHHhccCCC-eEEecccccchhhhHHHHHHHHHHHHc
Q 016578 221 G-DAVEFLRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPGG-VLCNMAESMWLHTHLIEDMISICRETF 296 (387)
Q Consensus 221 g-D~~~~l~~~~~~~fDvII~D~~dp~~~~--~~L~~~ef~~~l~~~LkpgG-vlv~q~~s~~~~~~~~~~~~~~l~~~F 296 (387)
+ |.++ ....++|+|++|.....+.. ++.-+...++.+.+.|+||| .|++-.-.+ ....+.++++.++..|
T Consensus 129 G~Df~~----~~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg--~~~~~~~~l~~lk~~F 202 (269)
T 2px2_A 129 GVDVFY----KPSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP--YMPKVIEKLESLQRRF 202 (269)
T ss_dssp SCCGGG----SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT--TSHHHHHHHHHHHHHH
T ss_pred cCCccC----CCCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC--CchHHHHHHHHHHHHc
Confidence 6 8765 22458999999976543221 11112225677788999999 888643221 1245667788999999
Q ss_pred CC
Q 016578 297 KG 298 (387)
Q Consensus 297 ~~ 298 (387)
..
T Consensus 203 ~~ 204 (269)
T 2px2_A 203 GG 204 (269)
T ss_dssp CC
T ss_pred CC
Confidence 83
No 293
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.51 E-value=0.00035 Score=66.92 Aligned_cols=149 Identities=19% Similarity=0.211 Sum_probs=86.7
Q ss_pred hHHHHHHHhccc--cCCCCCCEEEEEcC------cccHHHHHHHhcCCC-ceEEEEeCCHHHHHHHHhhcccccCCCCCC
Q 016578 144 CAYQEMIAHLPL--CSIPSPKTVLVVGG------GDGGVLREISRHDSV-ELIDICEIDKMVIDVSKKYFPELAVGFEDP 214 (387)
Q Consensus 144 ~~Y~eml~~l~l--~~~~~p~~VL~IG~------G~G~~~~el~k~~~~-~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~ 214 (387)
.-|.++-.++.- +..|...+||++|+ -.|+.. +.+..+. ..|+.+||.+-+. +.
T Consensus 91 ~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~s---------------da 153 (344)
T 3r24_A 91 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFVS---------------DA 153 (344)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCBC---------------SS
T ss_pred HHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCccccc---------------CC
Confidence 347777776633 23577889999996 456531 2222332 4899999976431 22
Q ss_pred CEEEEEcchhhHHhhCCCCCeeEEEEcCCCCC-CC--ccc----cchHHHHHHHHHhccCCCeEEecccccchhhhHHHH
Q 016578 215 RVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPV-GP--AQE----LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIED 287 (387)
Q Consensus 215 rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~-~~--~~~----L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~ 287 (387)
. .++.+|..... ..++||+||+|..... +. ... -+-+..++-+.+.|+|||.|++-. +.... .+
T Consensus 154 ~-~~IqGD~~~~~---~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV---FQGsg--~~ 224 (344)
T 3r24_A 154 D-STLIGDCATVH---TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI---TEHSW--NA 224 (344)
T ss_dssp S-EEEESCGGGEE---ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE---CSSSC--CH
T ss_pred C-eEEEccccccc---cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE---ecCCC--HH
Confidence 3 34899976532 1468999999976543 22 111 123456777899999999998532 11111 12
Q ss_pred HHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEe
Q 016578 288 MISICRETFKGSVHYAWASVPTYPSGIIGFLICS 321 (387)
Q Consensus 288 ~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~as 321 (387)
.+..+++.|. .|..+.. -+-.+..-.|++|.
T Consensus 225 ~L~~lrk~F~-~VK~fK~--ASRa~SsEvYLVG~ 255 (344)
T 3r24_A 225 DLYKLMGHFS-WWTAFVT--NVNASSSEAFLIGA 255 (344)
T ss_dssp HHHHHHTTEE-EEEEEEE--GGGTTSSCEEEEEE
T ss_pred HHHHHHhhCC-eEEEECC--CCCCCCeeEEEEee
Confidence 3344566887 4554421 11122234577775
No 294
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.51 E-value=0.00042 Score=68.62 Aligned_cols=84 Identities=12% Similarity=0.162 Sum_probs=60.9
Q ss_pred HHHHHHhcccc-----CCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE
Q 016578 146 YQEMIAHLPLC-----SIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI 220 (387)
Q Consensus 146 Y~eml~~l~l~-----~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~ 220 (387)
-.|++...... ...+..+|||||++.|+.+..++++. .+|++||+.+.--. +. .+++|+++.
T Consensus 192 L~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg--~~V~aVD~~~l~~~-----l~------~~~~V~~~~ 258 (375)
T 4auk_A 192 LEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRN--MWVYSVDNGPMAQS-----LM------DTGQVTWLR 258 (375)
T ss_dssp HHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTT--CEEEEECSSCCCHH-----HH------TTTCEEEEC
T ss_pred HHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCC--CEEEEEEhhhcChh-----hc------cCCCeEEEe
Confidence 36666554221 12456799999999999999999885 58999997542111 11 358999999
Q ss_pred cchhhHHhhCCCCCeeEEEEcCCC
Q 016578 221 GDAVEFLRQVPRGKYDAIIVDSSD 244 (387)
Q Consensus 221 gD~~~~l~~~~~~~fDvII~D~~d 244 (387)
+|++.+.. +.+.||+|++|...
T Consensus 259 ~d~~~~~~--~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 259 EDGFKFRP--TRSNISWMVCDMVE 280 (375)
T ss_dssp SCTTTCCC--CSSCEEEEEECCSS
T ss_pred CccccccC--CCCCcCEEEEcCCC
Confidence 99988743 24579999999864
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.47 E-value=0.00067 Score=70.31 Aligned_cols=157 Identities=17% Similarity=0.176 Sum_probs=96.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC----C---------CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD----S---------VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 226 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~----~---------~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~ 226 (387)
...+|+|-.||+|+++..+.++- . ...+.++|+|+....+|+-++-.. +.+ ..++..+|...+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh--g~~--~~~I~~~dtL~~ 292 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH--GLE--YPRIDPENSLRF 292 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH--TCS--CCEEECSCTTCS
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc--CCc--cccccccccccC
Confidence 34589999999999998876531 1 136999999999999999876433 222 335677887643
Q ss_pred H-hh-CCCCCeeEEEEcCCCCCCC------------ccccchHHHHHHHHHhcc-------CCCeEEecccccch-hhhH
Q 016578 227 L-RQ-VPRGKYDAIIVDSSDPVGP------------AQELVEKPFFDTIAKALR-------PGGVLCNMAESMWL-HTHL 284 (387)
Q Consensus 227 l-~~-~~~~~fDvII~D~~dp~~~------------~~~L~~~ef~~~l~~~Lk-------pgGvlv~q~~s~~~-~~~~ 284 (387)
- .+ ....+||+|+.+++..... ...-....|++.+.+.|+ |||++++...+.++ ....
T Consensus 293 ~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~ 372 (530)
T 3ufb_A 293 PLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGI 372 (530)
T ss_dssp CGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTH
T ss_pred chhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccch
Confidence 2 11 1234799999998763211 001112357888888887 79988765543333 3333
Q ss_pred HHHHHHHHHHHcCCCcceEEEEeec---cC-CC-cEEEEEEecC
Q 016578 285 IEDMISICRETFKGSVHYAWASVPT---YP-SG-IIGFLICSTE 323 (387)
Q Consensus 285 ~~~~~~~l~~~F~~~v~~~~~~iPt---yp-~g-~~gf~~ask~ 323 (387)
-..+.+.+-+.+. + -+.+..|. |+ .| .-.+++..|.
T Consensus 373 ~~~iRk~Lle~~~--l-~aII~LP~~~F~~~tgi~t~Il~~~K~ 413 (530)
T 3ufb_A 373 SARIKEELLKNFN--L-HTIVRLPEGVFAPYTDIAGNLLFFDRS 413 (530)
T ss_dssp HHHHHHHHHHHSE--E-EEEEECCTTTTTTTCCCCEEEEEEESS
T ss_pred HHHHHHHHhhcCE--E-EEEEECCcccCcCCCCCcEEEEEEECC
Confidence 3456666655543 2 22345564 33 23 2345666665
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.46 E-value=0.00078 Score=62.69 Aligned_cols=142 Identities=15% Similarity=0.146 Sum_probs=94.4
Q ss_pred chhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEc
Q 016578 142 DECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG 221 (387)
Q Consensus 142 de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~g 221 (387)
.-+-..|+.... ++ ....+||||||+.|+.+..++...++.+|.++|+-+.-. ..|.+-..+.-+.++++.+
T Consensus 63 a~~KL~ei~ek~-~l--~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh-----e~P~~~~s~gwn~v~fk~g 134 (267)
T 3p8z_A 63 GSAKLQWFVERN-MV--IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH-----EEPVPMSTYGWNIVKLMSG 134 (267)
T ss_dssp HHHHHHHHHHTT-SS--CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS-----CCCCCCCCTTTTSEEEECS
T ss_pred HHHHHHHHHHhc-CC--CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc-----cCcchhhhcCcCceEEEec
Confidence 333446777666 32 345599999999999999999888889999999965432 1232222334467999999
Q ss_pred -chhhHHhhCCCCCeeEEEEcCCCCCCCc--cccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCC
Q 016578 222 -DAVEFLRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKG 298 (387)
Q Consensus 222 -D~~~~l~~~~~~~fDvII~D~~dp~~~~--~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~ 298 (387)
|.+. + +...+|.|++|.....+.+ +.--+...++.+.+.|++ |-||+-.-+++. + .+.+.++.++..|..
T Consensus 135 vDv~~-~---~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~-p-~v~e~l~~lq~~fgg 207 (267)
T 3p8z_A 135 KDVFY-L---PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM-P-TVIEHLERLQRKHGG 207 (267)
T ss_dssp CCGGG-C---CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS-H-HHHHHHHHHHHHHCC
T ss_pred cceee-c---CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC-h-hHHHHHHHHHHHhCC
Confidence 8643 2 2367999999976522221 222233467788899998 788875544442 2 234667888888874
No 297
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.42 E-value=0.00017 Score=71.14 Aligned_cols=59 Identities=14% Similarity=0.069 Sum_probs=50.8
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 226 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~ 226 (387)
...|||||.|.|.+++.+++.....+|++||+|+..+...++.+ . .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E------GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T------TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c------CCCEEEEECCccch
Confidence 47899999999999999998633468999999999999998876 2 36899999999765
No 298
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.39 E-value=0.0012 Score=62.17 Aligned_cols=142 Identities=16% Similarity=0.106 Sum_probs=90.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-------CCCceEEEEe-----CCH----------------------H-HHHHH--H
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-------DSVELIDICE-----IDK----------------------M-VIDVS--K 201 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-------~~~~~Vt~VE-----iD~----------------------~-vi~~a--r 201 (387)
.-|..|+++|+--|+.+..++.. ....+|.++| ..+ + +-++. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 45779999999999988886542 3457899998 221 0 11111 1
Q ss_pred hhcccccCCCCCCCEEEEEcchhhHHhh----CCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 202 KYFPELAVGFEDPRVRLHIGDAVEFLRQ----VPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 202 ~~~~~~~~~~~d~rv~v~~gD~~~~l~~----~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
+++..+ +..+.+++++.|++.+.+.. .+..++|+|.+|.. . .. -+...|+.+...|+|||++++.-.
T Consensus 148 ~~~~~~--g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D-~-Y~----~t~~~le~~~p~l~~GGvIv~DD~- 218 (257)
T 3tos_A 148 ECSDFF--GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD-L-YE----PTKAVLEAIRPYLTKGSIVAFDEL- 218 (257)
T ss_dssp HTTSTT--TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC-C-HH----HHHHHHHHHGGGEEEEEEEEESST-
T ss_pred hhhhhc--CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc-c-cc----hHHHHHHHHHHHhCCCcEEEEcCC-
Confidence 111111 22347999999999887754 34457999999983 1 11 156789999999999999997431
Q ss_pred cchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCC
Q 016578 278 MWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSG 313 (387)
Q Consensus 278 ~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g 313 (387)
.... .....+.+.+.+.. ...-....|++|..
T Consensus 219 --~~~~-w~G~~~A~~ef~~~-~~~~i~~~p~~~~~ 250 (257)
T 3tos_A 219 --DNPK-WPGENIAMRKVLGL-DHAPLRLLPGRPAP 250 (257)
T ss_dssp --TCTT-CTHHHHHHHHHTCT-TSSCCEECTTCSCC
T ss_pred --CCCC-ChHHHHHHHHHHhh-CCCeEEEccCCCCC
Confidence 1111 12556777777763 33334567888754
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.27 E-value=0.00097 Score=63.89 Aligned_cols=143 Identities=13% Similarity=0.182 Sum_probs=91.9
Q ss_pred chhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEc
Q 016578 142 DECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG 221 (387)
Q Consensus 142 de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~g 221 (387)
..+-..++.... ++ ....+||||||+.|+.+..++...++.+|.++|+-..-. -.|.+-..+.-+-|+++.+
T Consensus 79 ~~~KL~ei~~~~-~l--~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~h-----e~P~~~~ql~w~lV~~~~~ 150 (321)
T 3lkz_A 79 GTAKLRWLVERR-FL--EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGH-----EEPQLVQSYGWNIVTMKSG 150 (321)
T ss_dssp HHHHHHHHHHTT-SC--CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTS-----CCCCCCCBTTGGGEEEECS
T ss_pred HHHHHHHHHHhc-CC--CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCc-----cCcchhhhcCCcceEEEec
Confidence 333446776662 22 344599999999999999999888888999999965421 0111111122234777776
Q ss_pred -chhhHHhhCCCCCeeEEEEcCCCCCCCc--cccchHHHHHHHHHhccCC-CeEEecccccchhhhHHHHHHHHHHHHcC
Q 016578 222 -DAVEFLRQVPRGKYDAIIVDSSDPVGPA--QELVEKPFFDTIAKALRPG-GVLCNMAESMWLHTHLIEDMISICRETFK 297 (387)
Q Consensus 222 -D~~~~l~~~~~~~fDvII~D~~dp~~~~--~~L~~~ef~~~l~~~Lkpg-Gvlv~q~~s~~~~~~~~~~~~~~l~~~F~ 297 (387)
|++. +. ...+|+|++|.....+.+ +.--+...++.+.+.|++| |-||+-.-+|+. ..+.+.++.++..|.
T Consensus 151 ~Dv~~-l~---~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~--~~v~e~l~~lq~~fg 224 (321)
T 3lkz_A 151 VDVFY-RP---SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM--PKVIEKMELLQRRYG 224 (321)
T ss_dssp CCTTS-SC---CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS--HHHHHHHHHHHHHHC
T ss_pred cCHhh-CC---CCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC--hHHHHHHHHHHHHhC
Confidence 7543 32 357999999987432221 2222334677888999999 899876545542 334467788888887
Q ss_pred C
Q 016578 298 G 298 (387)
Q Consensus 298 ~ 298 (387)
.
T Consensus 225 g 225 (321)
T 3lkz_A 225 G 225 (321)
T ss_dssp C
T ss_pred C
Confidence 4
No 300
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.24 E-value=0.00094 Score=65.26 Aligned_cols=76 Identities=24% Similarity=0.232 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHH---hhCC-CC
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL---RQVP-RG 233 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l---~~~~-~~ 233 (387)
.+...++|..+|.|+.++.+++. .+..+|+++|+|+++++.++ .+ .+.|++++.++..++. .+.. .+
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-------~~~Rv~lv~~nF~~l~~~L~~~g~~~ 127 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-------DDPRFSIIHGPFSALGEYVAERDLIG 127 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-------CCTTEEEEESCGGGHHHHHHHTTCTT
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-------cCCcEEEEeCCHHHHHHHHHhcCCCC
Confidence 34568999999999999999987 45679999999999999994 44 1469999999876653 3321 13
Q ss_pred CeeEEEEcC
Q 016578 234 KYDAIIVDS 242 (387)
Q Consensus 234 ~fDvII~D~ 242 (387)
++|.|+.|+
T Consensus 128 ~vDgILfDL 136 (347)
T 3tka_A 128 KIDGILLDL 136 (347)
T ss_dssp CEEEEEEEC
T ss_pred cccEEEECC
Confidence 699999884
No 301
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.08 E-value=0.0034 Score=61.35 Aligned_cols=151 Identities=17% Similarity=0.194 Sum_probs=88.6
Q ss_pred CCEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCeeEE
Q 016578 161 PKTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDAI 238 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~fDvI 238 (387)
+.+|||+.||.|++...+.+.+- .+.|.++|+|+..++..+.+++. ..++.+|..++... .+...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~---------~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH---------TQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc---------cccccCCHHHccHhHcCcCCcCEE
Confidence 45899999999999999987642 35799999999999999999863 24677888775421 111269999
Q ss_pred EEcCCC-CCCCc----------cccchHHHHHHHHHhcc--CCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEE
Q 016578 239 IVDSSD-PVGPA----------QELVEKPFFDTIAKALR--PGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWA 305 (387)
Q Consensus 239 I~D~~d-p~~~~----------~~L~~~ef~~~l~~~Lk--pgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~ 305 (387)
+.+.+- +...+ ..|+ .++++ +.+.++ |.-+++=++... .....+..+++.+++. ...+.+...
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l~-~~~~~-~i~~~~~~P~~~~~ENV~~l-~~~~~~~~i~~~l~~~-GY~v~~~vl 148 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNSF-LHILD-ILPRLQKLPKYILLENVKGF-EVSSTRDLLIQTIENC-GFQYQEFLL 148 (343)
T ss_dssp EECCC------------------CHH-HHHHH-HGGGCSSCCSEEEEEEETTG-GGSHHHHHHHHHHHHT-TEEEEEEEE
T ss_pred EEcCCCcchhhcCCcCCccCccchHH-HHHHH-HHHHhcCCCCEEEEeCCccc-cCHHHHHHHHHHHHHC-CCeeEEEEE
Confidence 988762 11111 0121 12333 445566 876666333332 2344566666666543 112222222
Q ss_pred EeeccCCC---cEEEEEEecCC
Q 016578 306 SVPTYPSG---IIGFLICSTEG 324 (387)
Q Consensus 306 ~iPtyp~g---~~gf~~ask~~ 324 (387)
.--.|.-- .--|+++.++.
T Consensus 149 ~a~~~GvPQ~R~R~~iv~~~~~ 170 (343)
T 1g55_A 149 SPTSLGIPNSRLRYFLIAKLQS 170 (343)
T ss_dssp CGGGGTCSCCCCEEEEEEEESS
T ss_pred EHHHCCCCCcccEEEEEEEeCC
Confidence 22223111 23688888764
No 302
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.07 E-value=0.0023 Score=63.73 Aligned_cols=109 Identities=13% Similarity=-0.051 Sum_probs=68.8
Q ss_pred CCEEEEEcCcccHHHHHHHhc-----------------CCCceEEEEeCC-----------HHHHHHHHhhcccccCCCC
Q 016578 161 PKTVLVVGGGDGGVLREISRH-----------------DSVELIDICEID-----------KMVIDVSKKYFPELAVGFE 212 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~-----------------~~~~~Vt~VEiD-----------~~vi~~ar~~~~~~~~~~~ 212 (387)
+-+|+|+||++|..+..+... .+.-+|...|+- +...+..++... .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g------~ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG------R 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC------C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc------C
Confidence 678999999999988776543 234577778875 333333322211 0
Q ss_pred CCCEEEEEcchhhHHhh-CCCCCeeEEEEcCCCCCCC--ccccc--------------------------h-------HH
Q 016578 213 DPRVRLHIGDAVEFLRQ-VPRGKYDAIIVDSSDPVGP--AQELV--------------------------E-------KP 256 (387)
Q Consensus 213 d~rv~v~~gD~~~~l~~-~~~~~fDvII~D~~dp~~~--~~~L~--------------------------~-------~e 256 (387)
..+--++.+....|-.. .+++++|+|++...-+|.. +..+. . ..
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 12336677777666533 2578999999887766632 11111 0 12
Q ss_pred HHHHHHHhccCCCeEEecc
Q 016578 257 FFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 257 f~~~l~~~LkpgGvlv~q~ 275 (387)
|++..++.|+|||.|++..
T Consensus 207 FL~~Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhccCCeEEEEE
Confidence 5777899999999998754
No 303
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.06 E-value=0.002 Score=63.88 Aligned_cols=129 Identities=17% Similarity=0.197 Sum_probs=76.3
Q ss_pred HHHHHhccccC--CCCCCEEEEEcCcccHHHHHHH--------hc-------CCCceEEEEeCCHHHHHHHHhhcccccC
Q 016578 147 QEMIAHLPLCS--IPSPKTVLVVGGGDGGVLREIS--------RH-------DSVELIDICEIDKMVIDVSKKYFPELAV 209 (387)
Q Consensus 147 ~eml~~l~l~~--~~~p~~VL~IG~G~G~~~~el~--------k~-------~~~~~Vt~VEiD~~vi~~ar~~~~~~~~ 209 (387)
.+.+..+.... .+.+-+|+|+|||+|..+..+. ++ ++.-+|...|+-..-....=+.++....
T Consensus 37 ~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~ 116 (374)
T 3b5i_A 37 EETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVS 116 (374)
T ss_dssp HHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCC
T ss_pred HHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhh
Confidence 44555554432 2456799999999999887762 11 2445778888755544333333443211
Q ss_pred CC--------CCCCEEEEEcchhhHHh-hCCCCCeeEEEEcCCCCCCC--cccc-------------------------c
Q 016578 210 GF--------EDPRVRLHIGDAVEFLR-QVPRGKYDAIIVDSSDPVGP--AQEL-------------------------V 253 (387)
Q Consensus 210 ~~--------~d~rv~v~~gD~~~~l~-~~~~~~fDvII~D~~dp~~~--~~~L-------------------------~ 253 (387)
.+ ...+--++.+.+..|-. -.+++++|+|++...-+|.. +..+ |
T Consensus 117 ~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay 196 (374)
T 3b5i_A 117 NTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAY 196 (374)
T ss_dssp CC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHH
T ss_pred hcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHH
Confidence 00 00122355555555432 23678999999988777643 2112 1
Q ss_pred h-------HHHHHHHHHhccCCCeEEecc
Q 016578 254 E-------KPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 254 ~-------~ef~~~l~~~LkpgGvlv~q~ 275 (387)
. ..|++..++.|+|||.|++..
T Consensus 197 ~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 197 KRQFQADLAEFLRARAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 1 236888899999999998654
No 304
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.82 E-value=0.00071 Score=58.52 Aligned_cols=60 Identities=17% Similarity=0.057 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCccc-HHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGDG-GVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~G-~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
..+.+||+||||.| .++..|+++.+ ..|+++||++..++ ++.+|.++-..+. -+.||+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~-------------------~v~dDiF~P~~~~-Y~~~DL 92 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGG-------------------IVRDDITSPRMEI-YRGAAL 92 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTT-------------------EECCCSSSCCHHH-HTTEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccc-------------------eEEccCCCCcccc-cCCcCE
Confidence 44679999999999 69999997533 58999999987654 5556665532211 137999
Q ss_pred EE
Q 016578 238 II 239 (387)
Q Consensus 238 II 239 (387)
|.
T Consensus 93 IY 94 (153)
T 2k4m_A 93 IY 94 (153)
T ss_dssp EE
T ss_pred EE
Confidence 95
No 305
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.78 E-value=0.0012 Score=62.91 Aligned_cols=47 Identities=19% Similarity=0.070 Sum_probs=41.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccc
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPEL 207 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~ 207 (387)
.....|||++||+|.++.++++.. .++++||+++.+++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHHh
Confidence 456799999999999999998875 68999999999999999987654
No 306
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.70 E-value=0.003 Score=61.71 Aligned_cols=100 Identities=12% Similarity=0.152 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++||++|+|. |..+..+++..+..+|+++|.+++-.+.+++.-... -+.....|..+-+.+...+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-------vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH-------VINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCE-------EecCCccCHHHHHHHhcCCCCcE
Confidence 4567999999875 777788888765557999999999999998752110 01100123333343332337999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
||-... ..+.++.+.+.|+++|.++...
T Consensus 262 vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 262 ALESTG----------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEECSC----------CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHHhcCCEEEEeC
Confidence 884332 1246888999999999998643
No 307
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.69 E-value=0.0018 Score=63.85 Aligned_cols=115 Identities=14% Similarity=0.060 Sum_probs=77.6
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhc----------------CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEc
Q 016578 158 IPSPKTVLVVGGGDGGVLREISRH----------------DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG 221 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~~el~k~----------------~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~g 221 (387)
.+++-+|+|+||++|..+..+... .+.-+|...|+-..-....-+.++... ...+--++.+
T Consensus 49 ~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~~~~~~f~~g 125 (359)
T 1m6e_X 49 VTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---DVDGVCFING 125 (359)
T ss_dssp SSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---SCTTCEEEEE
T ss_pred CCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---ccCCCEEEEe
Confidence 345568999999999766543322 345688999998888787777776432 1113467777
Q ss_pred chhhHHhh-CCCCCeeEEEEcCCCCCCC--ccc--------------------cch-------HHHHHHHHHhccCCCeE
Q 016578 222 DAVEFLRQ-VPRGKYDAIIVDSSDPVGP--AQE--------------------LVE-------KPFFDTIAKALRPGGVL 271 (387)
Q Consensus 222 D~~~~l~~-~~~~~fDvII~D~~dp~~~--~~~--------------------L~~-------~ef~~~l~~~LkpgGvl 271 (387)
.+..|-.. .+++++|+|++...-+|.. +.. .|. ..|++..++.|+|||.+
T Consensus 126 vpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 126 VPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp EESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred cchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 77666433 3678999999887665522 111 222 23688889999999999
Q ss_pred Eecc
Q 016578 272 CNMA 275 (387)
Q Consensus 272 v~q~ 275 (387)
++..
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8753
No 308
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.68 E-value=0.052 Score=52.58 Aligned_cols=147 Identities=17% Similarity=0.125 Sum_probs=93.3
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
..+|+++.||.|++...+.+.+ .+.|.++|+|+..++..+.+++.. . .+|..++.... -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~-~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKT-IPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGG-SCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhh-CCCCCEEEE
Confidence 3589999999999999988774 678899999999999999998642 1 58888765432 235999998
Q ss_pred cCCC-CCCCc----------cccchHHHHHHHHHhccCCCeEEecccccchh--hhHHHHHHHHHHHHcCCCcceEEEEe
Q 016578 241 DSSD-PVGPA----------QELVEKPFFDTIAKALRPGGVLCNMAESMWLH--THLIEDMISICRETFKGSVHYAWASV 307 (387)
Q Consensus 241 D~~d-p~~~~----------~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~--~~~~~~~~~~l~~~F~~~v~~~~~~i 307 (387)
+.+- +...+ ..|+ .++++. .+.++|.-+++=++...... ...+..+++.+++.= ..+.+....-
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~-~~~~r~-i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~G-Y~v~~~vl~a 154 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLF-FDIARI-VREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELD-YSFHAKVLNA 154 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHH-HHHHHH-HHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTT-BCCEEEEEEG
T ss_pred CCCCCCcchhcccCCCcchhhHHH-HHHHHH-HHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhCC-CEEEEEEEEH
Confidence 8653 22111 1122 244544 44579987776454433322 245667777776542 1344443443
Q ss_pred eccCCCc---EEEEEEecC
Q 016578 308 PTYPSGI---IGFLICSTE 323 (387)
Q Consensus 308 Ptyp~g~---~gf~~ask~ 323 (387)
-.|..-| =-|+++.++
T Consensus 155 ~~~GvPQ~R~R~~iv~~~~ 173 (327)
T 2c7p_A 155 LDYGIPQKRERIYMICFRN 173 (327)
T ss_dssp GGGTCSBCCEEEEEEEEBG
T ss_pred HHcCCCccceEEEEEEEeC
Confidence 4452222 368888765
No 309
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.57 E-value=0.015 Score=57.66 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=89.9
Q ss_pred CEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-C-----CCCCe
Q 016578 162 KTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-V-----PRGKY 235 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~-----~~~~f 235 (387)
-+|+|+-||.|++...+.+.+ .+.|.+||+|+..++..+.+++ ...++.+|+.++..+ . ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 389999999999999988774 5678899999999999998875 346778888765221 0 23579
Q ss_pred eEEEEcCCC-CCCCc---------cccchHHHHHHHHHhccCCCeEEecccccch--hhhHHHHHHHHHHHHcCCCc-ce
Q 016578 236 DAIIVDSSD-PVGPA---------QELVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISICRETFKGSV-HY 302 (387)
Q Consensus 236 DvII~D~~d-p~~~~---------~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--~~~~~~~~~~~l~~~F~~~v-~~ 302 (387)
|+|+.+.+- +...+ ..|+ .+|++ +.+.++|.-+++=++..... ....++.++ .+.+. ...+ .+
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L~-~~~~~-~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~-GY~v~~~ 148 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQLY-MHFYR-LVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSG-DYDILDP 148 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHHH-HHHHH-HHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHT-TEEECCC
T ss_pred eEEEecCCCCCcccccCCCCCCchHHHH-HHHHH-HHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcC-CCccCcE
Confidence 999988763 22111 1122 23444 44567998877755443332 223455555 55443 1122 22
Q ss_pred EEEEeeccCCC---cEEEEEEecC
Q 016578 303 AWASVPTYPSG---IIGFLICSTE 323 (387)
Q Consensus 303 ~~~~iPtyp~g---~~gf~~ask~ 323 (387)
....--.|.-- .=-|+++.++
T Consensus 149 ~vl~a~dyGvPQ~R~R~~iig~r~ 172 (376)
T 3g7u_A 149 IKVKASDYGAPTIRTRYFFIGVKK 172 (376)
T ss_dssp EEEEGGGGTCSBCCEEEEEEEEEG
T ss_pred EEEEHhhCCCCCCCcEEEEEEEeC
Confidence 22333334221 2367888765
No 310
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.47 E-value=0.016 Score=56.31 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=68.4
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE-----cchhhHHhhC-C
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI-----GDAVEFLRQV-P 231 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~-----gD~~~~l~~~-~ 231 (387)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. . +.-+.... .|..+.+++. .
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-------~~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-------PEVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-------TTCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-------hhcccccccccchHHHHHHHHHHhC
Confidence 5567999999765 77788888887666699999999999999986 3 11222221 2333334332 2
Q ss_pred CCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 232 RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 232 ~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
...+|+||-... ....++.+.+.|+++|.++...
T Consensus 250 g~g~Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECTG----------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCEEEECCC----------ChHHHHHHHHHhcCCCEEEEEc
Confidence 347999884332 1236888999999999998653
No 311
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.46 E-value=0.008 Score=58.40 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE------cchhhHHhhCC
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI------GDAVEFLRQVP 231 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~------gD~~~~l~~~~ 231 (387)
...++||++|+|. |..+..+++..+..+|+++|.+++-.+.+++.-. + .++. .|..+-+.+..
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~---~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-------D---LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------S---EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-------C---EEEcCcccccchHHHHHHHHh
Confidence 4567999999875 7777888887665589999999999998886421 1 1222 12222232221
Q ss_pred CCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 232 RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 232 ~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.+.+|+||-... ....++.+.+.|+++|.++...
T Consensus 240 ~~g~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTG----------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCC----------ChHHHHHHHHHhcCCCEEEEEe
Confidence 246999884332 1236788899999999998654
No 312
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.45 E-value=0.0063 Score=59.61 Aligned_cols=101 Identities=18% Similarity=0.241 Sum_probs=68.9
Q ss_pred CCCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh---CCCC
Q 016578 158 IPSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ---VPRG 233 (387)
Q Consensus 158 ~~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~---~~~~ 233 (387)
....++||++|+|. |..+..+++..+..+|++++.+++-.+++++.=... -+.....|..+.+.+ ...+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-------vi~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA-------TVDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE-------EECTTSSCHHHHHHSTTSSSTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE-------EECCCCcCHHHHHHhhhhccCC
Confidence 35677999999865 777788888876669999999999999998852111 011111344455544 3234
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.+|+||-... ..+.++.+.+.|+++|.+++..
T Consensus 253 g~Dvvid~~G----------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 253 GVDVVIECAG----------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CEEEEEECSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCEEEECCC----------CHHHHHHHHHHhccCCEEEEEe
Confidence 7999884322 1246889999999999998654
No 313
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.32 E-value=0.0071 Score=58.59 Aligned_cols=100 Identities=22% Similarity=0.238 Sum_probs=67.1
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCee
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~fD 236 (387)
...++||++|+|. |..+..++++.+..+|+++|.+++-.+.+++.-... -+.....|..+.+.+. ....+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-------vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD-------IINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE-------EECGGGSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce-------EEcCCCcCHHHHHHHHcCCCCCC
Confidence 5567999999765 777788888876668999999999999988852210 0111113444444433 234699
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+||-....+ +.++.+.+.|+++|.++...
T Consensus 238 ~v~d~~g~~----------~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 238 KVVIAGGDV----------HTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEECSSCT----------THHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCCh----------HHHHHHHHHHhcCCEEEEec
Confidence 998433211 26888999999999998643
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.32 E-value=0.0068 Score=58.36 Aligned_cols=98 Identities=18% Similarity=0.296 Sum_probs=67.9
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.-... -+.....|..+.+.+. .+.+|+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~-------~i~~~~~~~~~~~~~~-~g~~d~ 235 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEV-------AVNARDTDPAAWLQKE-IGGAHG 235 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHH-HSSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCE-------EEeCCCcCHHHHHHHh-CCCCCE
Confidence 4567999999765 8888889998654 9999999999999988752211 0111113444444442 247999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
||.... ..+.++.+.+.|+++|.++...
T Consensus 236 vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 236 VLVTAV----------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEeCC----------CHHHHHHHHHHhccCCEEEEeC
Confidence 985542 2247889999999999998643
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.30 E-value=0.0084 Score=57.94 Aligned_cols=67 Identities=16% Similarity=0.244 Sum_probs=50.0
Q ss_pred CCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCcc---c-------cchHHHHHHHHHhccCCCeEEeccccc
Q 016578 212 EDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQ---E-------LVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 212 ~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~---~-------L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
...+.+++.+|..+.++..++++||+|++|++....... . .+..+.++.++++|+|||.+++.....
T Consensus 11 ~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 11 TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp ECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 456889999999998876667799999999876443110 0 123467888999999999998865443
No 316
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.10 E-value=0.012 Score=57.50 Aligned_cols=102 Identities=17% Similarity=0.125 Sum_probs=67.1
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++||++|+|. |..+..+++..+..+|+++|.+++-.+.+++.=........+. ..|..+.+++...+.+|+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~-----~~~~~~~i~~~~~gg~D~ 266 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDH-----DKPIQEVIVDLTDGGVDY 266 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGC-----SSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccC-----chhHHHHHHHhcCCCCCE
Confidence 4567999999763 7777788887665689999999999999887421100000000 123444454433448999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCC-CeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~Lkpg-Gvlv~q~ 275 (387)
||-... ..+.++.+.+.|+++ |.+++..
T Consensus 267 vid~~g----------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 267 SFECIG----------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp EEECSC----------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECCC----------CHHHHHHHHHHhhccCCEEEEEc
Confidence 884332 224788999999997 9988644
No 317
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.06 E-value=0.093 Score=50.98 Aligned_cols=155 Identities=15% Similarity=0.159 Sum_probs=90.6
Q ss_pred CEEEEEcCcccHHHHHHHhcCC-CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCeeEEE
Q 016578 162 KTVLVVGGGDGGVLREISRHDS-VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYDAII 239 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~~-~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~fDvII 239 (387)
-+|+++-||.|++...+.+.+- .+.|.++|+|+..++.-+.+++. ..++.+|..++..+ .+...+|+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCCEEE
Confidence 3899999999999998877642 36688999999999999999863 23566787765321 1123699999
Q ss_pred EcCCC-CCC----------CccccchHHHHHHHHHhcc-CCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEe
Q 016578 240 VDSSD-PVG----------PAQELVEKPFFDTIAKALR-PGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASV 307 (387)
Q Consensus 240 ~D~~d-p~~----------~~~~L~~~ef~~~l~~~Lk-pgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~i 307 (387)
...+- +.. +-..|+. ++++ +.+.++ |.-+++=|+... .....+..+.+.+++. ...+.+....-
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~~-~~~r-~i~~~~~P~~~vlENV~gl-~~~~~~~~i~~~l~~~-GY~v~~~vl~a 150 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSFL-YLIG-ILDQLDNVDYILMENVKGF-ENSTVRNLFIDKLKEC-NFIYQEFLLCP 150 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCHH-HHHH-HGGGCTTCCEEEEEECTTG-GGSHHHHHHHHHHHHT-TEEEEEEEECT
T ss_pred ecCCCcchhhhhhccCCcCcccccHH-HHHH-HHHHhcCCCEEEEecchhh-hhhhHHHHHHHHHHhC-CCeEEEEEecH
Confidence 76543 111 1112322 3444 444565 887777555433 2234456666666553 11222222222
Q ss_pred eccCCC---cEEEEEEecCCCCCCC
Q 016578 308 PTYPSG---IIGFLICSTEGPHVDF 329 (387)
Q Consensus 308 Ptyp~g---~~gf~~ask~~~~~~~ 329 (387)
-.|.-. .--|++|.++..+..|
T Consensus 151 ~~~GvPQ~R~R~fiva~r~~~~~~f 175 (333)
T 4h0n_A 151 STVGVPNSRLRYYCTARRNNLTWPF 175 (333)
T ss_dssp TTTTCSCCCCEEEEEEEETTSCCCS
T ss_pred HHcCCCccceEEEEEEEeCCCCCCC
Confidence 223111 2368888877533333
No 318
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.00 E-value=0.015 Score=56.23 Aligned_cols=65 Identities=15% Similarity=0.219 Sum_probs=48.4
Q ss_pred CCCEEEE-EcchhhHHhhCCCCCeeEEEEcCCCCCCC------cc-ccchHHHHHHHHHhccCCCeEEecccc
Q 016578 213 DPRVRLH-IGDAVEFLRQVPRGKYDAIIVDSSDPVGP------AQ-ELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 213 d~rv~v~-~gD~~~~l~~~~~~~fDvII~D~~dp~~~------~~-~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
+...+++ .+|++++++..+++++|+|++|++...+. .. .-+..+.+..++++|+|+|.+++....
T Consensus 36 ~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 4457888 99999999877677899999999875441 00 012346778889999999999876543
No 319
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.88 E-value=0.033 Score=53.51 Aligned_cols=100 Identities=14% Similarity=0.212 Sum_probs=67.7
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCee
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~fD 236 (387)
...++||++|+|. |+.+..++++....+|+++|.+++-.+.+++.-... -+.....|..+.+.+. ....+|
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~-------~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADV-------TINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSE-------EEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeE-------EEeCCCCCHHHHhhhhcCCCCce
Confidence 4567999999875 455666677655679999999999888888764321 2222334555555443 233588
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+++.+... .+.+....+.|+++|.++...
T Consensus 235 ~~~~~~~~----------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAVA----------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCSC----------HHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEeccC----------cchhheeheeecCCceEEEEe
Confidence 88866532 246888899999999988654
No 320
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.85 E-value=0.012 Score=58.04 Aligned_cols=109 Identities=11% Similarity=0.103 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcch-hhHHhhC-CCCCe
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA-VEFLRQV-PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~-~~~l~~~-~~~~f 235 (387)
...++||++|+|. |..+..+++..+..+|+++|.+++-.+.+++.-. + -+.....|. .+.+++. ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~-~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF-------E-TIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC-------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-------c-EEcCCCcchHHHHHHHHhCCCCC
Confidence 4567999999876 7788888887555589999999999998876411 0 011111232 3333322 22369
Q ss_pred eEEEEcCCCCCC---C-ccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVG---P-AQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~---~-~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||-....+.. + ..++-....++.+.+.|+++|.+++..
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 998854332210 0 000001236888999999999988643
No 321
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.83 E-value=0.036 Score=54.02 Aligned_cols=102 Identities=15% Similarity=0.080 Sum_probs=64.8
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-........+. ..|..+.+++...+.+|+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-----~~~~~~~~~~~~~~g~D~ 265 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDH-----SEPISQVLSKMTNGGVDF 265 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGC-----SSCHHHHHHHHHTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEecccc-----chhHHHHHHHHhCCCCCE
Confidence 4567999999764 6677778887655589999999999998886421100000000 012333343322247999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCC-CeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~Lkpg-Gvlv~q~ 275 (387)
||-... ..+.++.+.+.|+++ |.++...
T Consensus 266 vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 266 SLECVG----------NVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp EEECSC----------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECCC----------CHHHHHHHHHHhhcCCcEEEEEc
Confidence 884332 124688899999999 9988643
No 322
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.82 E-value=0.031 Score=54.23 Aligned_cols=94 Identities=16% Similarity=0.129 Sum_probs=62.0
Q ss_pred CEEEEEcCc-ccHHH-HHHH-hcCCCceEEEEeCCHH---HHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCe
Q 016578 162 KTVLVVGGG-DGGVL-REIS-RHDSVELIDICEIDKM---VIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 235 (387)
Q Consensus 162 ~~VL~IG~G-~G~~~-~el~-k~~~~~~Vt~VEiD~~---vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~f 235 (387)
++||++|+| -|..+ ..++ +..+..+|++++.+++ -.+.+++.-...- .+. ..|..+ +.+. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~-------~~~~~~-i~~~-~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSR-------QTPVED-VPDV-YEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETT-------TSCGGG-HHHH-SCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCC-------ccCHHH-HHHh-CCCC
Confidence 899999964 46677 7888 8765556999999988 7888876421110 011 123344 4433 3379
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||-... ....++.+.+.|+++|.++...
T Consensus 244 Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 244 DFIYEATG----------FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEEEECSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCC----------ChHHHHHHHHHHhcCCEEEEEe
Confidence 99884322 1236788999999999998643
No 323
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.80 E-value=0.015 Score=54.21 Aligned_cols=61 Identities=18% Similarity=0.283 Sum_probs=46.0
Q ss_pred CEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCc--cc--------cchHHHHHHHHHhccCCCeEEecc
Q 016578 215 RVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPA--QE--------LVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 215 rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~--~~--------L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
..+++.+|+.++++..++++||+|++|++...+.. .. -+..+.++.++++|+|+|.+++..
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 34689999999998876679999999998754411 11 134567788899999999988753
No 324
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.75 E-value=0.023 Score=55.37 Aligned_cols=102 Identities=18% Similarity=0.057 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-........+. ..|..+.+.+...+.+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-----~~~~~~~~~~~~~~g~D~ 264 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-----KKPIQEVLTEMSNGGVDF 264 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGC-----SSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEeccccc-----chhHHHHHHHHhCCCCcE
Confidence 4567999999764 6677778887655589999999999898876421100000000 023334444332347998
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCC-CeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~Lkpg-Gvlv~q~ 275 (387)
||-... ..+.++.+.+.|+++ |.++...
T Consensus 265 vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 265 SFEVIG----------RLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp EEECSC----------CHHHHHHHHHHBCTTTCEEEECS
T ss_pred EEECCC----------CHHHHHHHHHHhhcCCcEEEEec
Confidence 884332 124678889999999 9988643
No 325
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.74 E-value=0.019 Score=56.03 Aligned_cols=97 Identities=13% Similarity=-0.009 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE-----cchhhHHhhCCC
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI-----GDAVEFLRQVPR 232 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~-----gD~~~~l~~~~~ 232 (387)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.=. + .++. .|..+.+++...
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~---~vi~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA-------T---ECLNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC-------S---EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-------c---EEEecccccchHHHHHHHHhC
Confidence 4567999999764 6677778887555589999999999898886421 1 1111 233344443323
Q ss_pred CCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCC-CeEEecc
Q 016578 233 GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 275 (387)
Q Consensus 233 ~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~Lkpg-Gvlv~q~ 275 (387)
+.+|+||-... ..+.++.+.+.|+++ |.++...
T Consensus 260 gg~Dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 260 GGVDYAVECAG----------RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SCBSEEEECSC----------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CCCCEEEECCC----------CHHHHHHHHHHHhcCCCEEEEEc
Confidence 47999884322 124688899999999 9988643
No 326
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.70 E-value=0.028 Score=54.17 Aligned_cols=99 Identities=18% Similarity=0.202 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCee
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~fD 236 (387)
...++||++|+|. |..+..+++.....+|+++|.+++-.+.+++.-. +.-+. ...|..+.+.+. ....+|
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-------~~~i~-~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-------DAAVK-SGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-------SEEEE-CSTTHHHHHHHHHGGGCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-------CEEEc-CCCcHHHHHHHHhCCCCCe
Confidence 4567999999765 7777888887545799999999999999987521 10011 011333333332 223799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+||-... ..+.++.+.+.|+++|.++...
T Consensus 242 ~v~d~~G----------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 242 AVFDFVG----------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECCC----------CHHHHHHHHHHHhcCCEEEEEC
Confidence 8884332 2247889999999999998643
No 327
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.69 E-value=0.044 Score=53.27 Aligned_cols=102 Identities=17% Similarity=0.095 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-...-....+. ..|..+.+++...+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-----~~~~~~~v~~~~~~g~D~ 263 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-----SKPIQEVLIEMTDGGVDY 263 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGC-----SSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccc-----cccHHHHHHHHhCCCCCE
Confidence 4567999999764 6677778887555589999999999998886421100000000 023334444332347999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCC-CeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~Lkpg-Gvlv~q~ 275 (387)
||-... ..+.++.+.+.|+++ |.++...
T Consensus 264 vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 264 SFECIG----------NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp EEECSC----------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECCC----------cHHHHHHHHHhhccCCcEEEEEe
Confidence 884332 124678899999999 9988643
No 328
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.66 E-value=0.021 Score=55.72 Aligned_cols=102 Identities=12% Similarity=0.015 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-...-....+. ..|..+.+++...+.+|+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~-----~~~~~~~v~~~~~~g~Dv 268 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPREL-----DKPVQDVITELTAGGVDY 268 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGC-----SSCHHHHHHHHHTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccc-----cchHHHHHHHHhCCCccE
Confidence 4567999999763 6777788887665589999999999898876421100000000 023333343322247999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCC-CeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~Lkpg-Gvlv~q~ 275 (387)
||-... ..+.++.+.+.|+++ |.+++..
T Consensus 269 vid~~G----------~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 269 SLDCAG----------TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp EEESSC----------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHhhcCCCEEEEEC
Confidence 884332 124688899999999 9988644
No 329
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.59 E-value=0.015 Score=55.32 Aligned_cols=64 Identities=22% Similarity=0.296 Sum_probs=45.2
Q ss_pred CCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCc-----cc---c-----c---hHHHHHHHHHhccCCCeEEeccc
Q 016578 213 DPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPA-----QE---L-----V---EKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 213 d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~-----~~---L-----~---~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
-.+++++++|.+++++..++++||+|++|++...... .. + + -.++++.+.++|+|||.+++...
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 3578999999999887666679999999987632110 00 0 1 13467789999999999987654
No 330
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.57 E-value=0.03 Score=54.09 Aligned_cols=99 Identities=17% Similarity=0.125 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE-cchhhHHhhC-C---C
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI-GDAVEFLRQV-P---R 232 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~-gD~~~~l~~~-~---~ 232 (387)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.-. +.-+.... .|..+-+.+. . .
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA-------DVTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC-------SEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCC-------CEEEcCcccccHHHHHHHHhccccC
Confidence 4567999999764 6677778887654 59999999999999886421 10011100 2222223221 1 2
Q ss_pred CCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 233 GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 233 ~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+.+|+||-... ....++.+.+.|+++|.++...
T Consensus 239 ~g~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 239 DLPNVTIDCSG----------NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC----------CHHHHHHHHHHHhcCCEEEEEe
Confidence 46999884332 1235788899999999998643
No 331
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.57 E-value=0.092 Score=51.80 Aligned_cols=101 Identities=13% Similarity=0.162 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCee
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~fD 236 (387)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-...-....+ .|..+.+.+. ....+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-------~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTK-------ENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTT-------SCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCC-------CCHHHHHHHHhCCCCCC
Confidence 4567999999764 677777888876669999999999999998752211000111 2444444443 234699
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhc----cCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKAL----RPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~L----kpgGvlv~q~ 275 (387)
+||-.... . ...++.+.+.| +++|.++...
T Consensus 285 ~vid~~g~----~-----~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEATGV----P-----QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECSSC----H-----HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECCCC----c-----HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 88843321 1 12455555666 9999998754
No 332
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.54 E-value=0.029 Score=49.34 Aligned_cols=98 Identities=12% Similarity=0.069 Sum_probs=60.7
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCe
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~f 235 (387)
...++||++|+ |.|..+..+++..+ .+|++++.+++..+.+++. .. +..+.....|..+.+.+ ...+.+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-GV------EYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-CC------SEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEeeCCcHHHHHHHHHHhCCCCC
Confidence 45679999994 55666666666543 5899999999888777653 10 10111111233333322 223469
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||.... . +.++.+.+.|+++|.++...
T Consensus 109 D~vi~~~g----~-------~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSLA----G-------EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECCC----T-------HHHHHHHHTEEEEEEEEECS
T ss_pred eEEEECCc----h-------HHHHHHHHHhccCCEEEEEc
Confidence 99985432 1 36788899999999998643
No 333
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.54 E-value=0.33 Score=46.22 Aligned_cols=147 Identities=19% Similarity=0.208 Sum_probs=90.3
Q ss_pred EEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcC
Q 016578 163 TVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDS 242 (387)
Q Consensus 163 ~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~ 242 (387)
+||++-||.|++..-+.+. +.+-|.++|+|+..++.-+.+++. +++.+|..+.-.+. -...|+|+..+
T Consensus 2 kvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~~~----------~~~~~DI~~i~~~~-~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNHSA----------KLIKGDISKISSDE-FPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHCCS----------EEEESCGGGCCGGG-SCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHCCC----------CcccCChhhCCHhh-CCcccEEEecC
Confidence 7999999999998887766 467788999999999999988752 56789987753322 23689988543
Q ss_pred CC-CC---C----C---ccccchHHHHHHHHHhccCCCeEEecccccch--hhhHHHHHHHHHHHHcCCCcceEEEEeec
Q 016578 243 SD-PV---G----P---AQELVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISICRETFKGSVHYAWASVPT 309 (387)
Q Consensus 243 ~d-p~---~----~---~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--~~~~~~~~~~~l~~~F~~~v~~~~~~iPt 309 (387)
+- +. + . -..|+ .++++ +.+.++|.-+++=++..... ....+..+++.+.+.-- .+.+....--.
T Consensus 70 PCQ~fS~ag~~~g~~d~R~~L~-~~~~r-~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY-~v~~~vlna~~ 146 (331)
T 3ubt_Y 70 PSQSWSEGGSLRGIDDPRGKLF-YEYIR-ILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGY-DVHIILLNAND 146 (331)
T ss_dssp CGGGTEETTEECCTTCGGGHHH-HHHHH-HHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHTE-EEEEEEEEGGG
T ss_pred CCCCcCCCCCccCCCCchhHHH-HHHHH-HHhccCCeEEEeeeecccccccccchhhhhhhhhccCCc-EEEEEeccccc
Confidence 31 11 1 1 11222 23443 45568998777755443322 23466777777766521 23333333333
Q ss_pred cCCCc---EEEEEEecCC
Q 016578 310 YPSGI---IGFLICSTEG 324 (387)
Q Consensus 310 yp~g~---~gf~~ask~~ 324 (387)
|.--| =-|+++.++.
T Consensus 147 yGvPQ~R~Rvfivg~r~~ 164 (331)
T 3ubt_Y 147 YGVAQDRKRVFYIGFRKE 164 (331)
T ss_dssp TTCSBCCEEEEEEEEEGG
T ss_pred CCCCcccceEEEEEEcCC
Confidence 42222 2678887653
No 334
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.52 E-value=0.066 Score=52.12 Aligned_cols=97 Identities=15% Similarity=0.208 Sum_probs=64.8
Q ss_pred CCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 160 SPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
..++||++| +|-|..+..+++.....+|++++.+++-.+.+++.-... .++. + .|..+.+.+...+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~--vi~~-~-----~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHH--VIDH-S-----KPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSE--EECT-T-----SCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCE--EEeC-C-----CCHHHHHHHhcCCCceE
Confidence 456899998 456888888898632469999999999999888742110 0111 1 23344444443457998
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
||-... ..+.++.+.++|+++|.++..
T Consensus 243 vid~~g----------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH----------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC----------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC----------chhhHHHHHHHhcCCCEEEEE
Confidence 874322 224688899999999999864
No 335
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.45 E-value=0.014 Score=54.50 Aligned_cols=46 Identities=11% Similarity=0.078 Sum_probs=41.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhccc
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPE 206 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~ 206 (387)
.....|||..||+|.++.++.+.. .+++++|+++..++.+++++..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHh
Confidence 556799999999999999998875 6999999999999999998764
No 336
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.38 E-value=0.024 Score=54.32 Aligned_cols=100 Identities=13% Similarity=0.057 Sum_probs=65.5
Q ss_pred CCCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCe
Q 016578 158 IPSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 235 (387)
Q Consensus 158 ~~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~f 235 (387)
....++||++|+ |-|..+..+++..+. +|++++.+++-.+.+.+.+.. +.-+.....|..+.+.+...+.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGF------DGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCC------SEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC------CEEEECCCHHHHHHHHHhcCCCc
Confidence 356779999997 567777788887654 999999999988888443321 10011111334444443334579
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||-.... +.++.+.+.|+++|.++...
T Consensus 220 d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 220 DVFFDNVGG-----------EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEEESSCH-----------HHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCc-----------chHHHHHHHHhhCCEEEEEe
Confidence 988854321 36888899999999998643
No 337
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.37 E-value=0.16 Score=49.18 Aligned_cols=153 Identities=10% Similarity=0.107 Sum_probs=87.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC-CCceE-EEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCee
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD-SVELI-DICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKYD 236 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~-~~~~V-t~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~fD 236 (387)
.+-+|+++-||.|++...+.+.+ ..+.| .++|+|+..++..+.+++.. ++.+|..++..+ .+...+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCCC
Confidence 34589999999999999887764 23566 79999999999999998632 445666554221 1112699
Q ss_pred EEEEcCCC-CC-----CCccccc--hHHHHHH----HHHhc--cCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcce
Q 016578 237 AIIVDSSD-PV-----GPAQELV--EKPFFDT----IAKAL--RPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHY 302 (387)
Q Consensus 237 vII~D~~d-p~-----~~~~~L~--~~ef~~~----l~~~L--kpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~ 302 (387)
+|+..++- +. +....+. ....|.. +.+.+ +|.-+++=++... .....+..+.+.+++. ...+.+
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl-~~~~~~~~i~~~l~~~-GY~v~~ 156 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLF-KESLVFKEIYNILIKN-QYYIKD 156 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGG-GGSHHHHHHHHHHHHT-TCEEEE
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhh-cChHHHHHHHHHHHhC-CCEEEE
Confidence 99976553 22 1100000 1112333 33455 6776666444332 2334566677776654 212333
Q ss_pred EEEEeeccCCC---cEEEEEEecCC
Q 016578 303 AWASVPTYPSG---IIGFLICSTEG 324 (387)
Q Consensus 303 ~~~~iPtyp~g---~~gf~~ask~~ 324 (387)
....--.|.-. .=-|+++.++.
T Consensus 157 ~vl~a~~yGvPQ~R~R~fivg~r~~ 181 (327)
T 3qv2_A 157 IICSPIDIGIPNSRTRYYVMARLTP 181 (327)
T ss_dssp EEECGGGGTCSBCCCEEEEEEESSC
T ss_pred EEEeHHHcCCCccceEEEEEEEeCC
Confidence 32332334211 23688888763
No 338
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.26 E-value=0.036 Score=54.32 Aligned_cols=97 Identities=18% Similarity=0.111 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCc-ccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE------cchhhHHhhC-
Q 016578 159 PSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI------GDAVEFLRQV- 230 (387)
Q Consensus 159 ~~p~~VL~IG~G-~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~------gD~~~~l~~~- 230 (387)
...++||++|+| -|..+..+++..+..+|++++.+++-.+.+++.-. + .++. .|..+.+++.
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA-------D---LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC-------S---EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC-------c---EEEeccccCcchHHHHHHHHh
Confidence 456799999955 46677778887654699999999999998886411 1 1222 1223333332
Q ss_pred CCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 231 PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 231 ~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
....+|+||-.... + +.++.+.+.|+++|.++...
T Consensus 264 ~g~g~Dvvid~~g~---~-------~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATGD---S-------RALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSSC---T-------THHHHHHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCCC---H-------HHHHHHHHHHhcCCEEEEEe
Confidence 22369998843321 1 25778889999999998643
No 339
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.26 E-value=0.072 Score=44.42 Aligned_cols=96 Identities=20% Similarity=0.171 Sum_probs=59.9
Q ss_pred CCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCeeE
Q 016578 161 PKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYDA 237 (387)
Q Consensus 161 p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~fDv 237 (387)
..+|+++|+|. |......++.. ..+|+++|.|++.++.+++. .+.++.+|+.+ .++...-+..|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~~-----------g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRER-----------GVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHT-----------TCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHc-----------CCCEEECCCCCHHHHHhcCcccCCE
Confidence 35899999974 33323233322 25899999999998877652 35678888753 344433357999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
||+...+.. .....-...+.+.|+..++...
T Consensus 75 vi~~~~~~~-------~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 75 LILTIPNGY-------EAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EEECCSCHH-------HHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEEECCChH-------HHHHHHHHHHHHCCCCeEEEEE
Confidence 997665421 1112334566678888777544
No 340
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.19 E-value=0.029 Score=54.16 Aligned_cols=99 Identities=17% Similarity=0.214 Sum_probs=64.4
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCeeE
Q 016578 160 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~fDv 237 (387)
..++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-........+ .|..+.+.+. ....+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~-------~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE-------EDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT-------SCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC-------cCHHHHHHHHcCCCCCCE
Confidence 567999999753 667777788765448999999999988887642110000111 2333444332 2236999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
||-... ..+.++.+.+.|+++|.++...
T Consensus 240 vid~~g----------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 240 FLEFSG----------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEECSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHHhcCCEEEEEc
Confidence 885432 1246788899999999988643
No 341
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.15 E-value=0.034 Score=53.50 Aligned_cols=98 Identities=21% Similarity=0.278 Sum_probs=63.4
Q ss_pred CCCEEEEEcCc-ccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 160 SPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 160 ~p~~VL~IG~G-~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..++||++|+| .|..+..+++..+..+|++++.+++-.+.+++. ...-....+ .|..+.+++...+.+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~-------~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE-------EDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT-------SCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc-------cCHHHHHHHhcCCCCCEE
Confidence 56799999975 366777788876544899999999888877664 221111111 233333332213469998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|-... ..+.++.+.+.|+++|.++...
T Consensus 236 id~~g----------~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 236 LEFSG----------NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EECSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EECCC----------CHHHHHHHHHHHhcCCEEEEEe
Confidence 84332 1246788999999999988643
No 342
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.08 E-value=0.051 Score=53.42 Aligned_cols=109 Identities=14% Similarity=0.132 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcc-hhhHHhhC-CCCCe
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGD-AVEFLRQV-PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD-~~~~l~~~-~~~~f 235 (387)
...++||++|+|. |..+..+++..+..+|+++|.+++-++.+++.=. + -+.....| ..+.+++. ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~-~i~~~~~~~~~~~v~~~t~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-------E-IADLSLDTPLHEQIAALLGEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC-------c-EEccCCcchHHHHHHHHhCCCCC
Confidence 4567999999765 7778888888665689999999999999977411 1 01100112 23333332 23469
Q ss_pred eEEEEcCCCCC-CC----ccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPV-GP----AQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~-~~----~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||-....+. +. .......+.++.+.+.|+++|.+++..
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 256 DCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 99885433221 00 000111236888999999999988643
No 343
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.99 E-value=0.067 Score=51.24 Aligned_cols=100 Identities=11% Similarity=0.090 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCee
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~fD 236 (387)
...++||++|+|. |..+..+++..+...+++++.+++-.+++++.=... -+.....|..+.++.. ....+|
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~-------~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQ-------TFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeE-------EEeCCCCCHHHHHHhhcccCCcc
Confidence 4567999999764 556677788877778899999999999998852211 1111112333333322 134578
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+|+-... ..+.++.+.+.|+++|.+++..
T Consensus 232 ~v~d~~G----------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETAG----------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECSC----------SHHHHHHHHHHCCTTCEEEECC
T ss_pred ccccccc----------ccchhhhhhheecCCeEEEEEe
Confidence 7764332 2246888999999999998654
No 344
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.93 E-value=0.12 Score=49.71 Aligned_cols=97 Identities=14% Similarity=0.312 Sum_probs=64.4
Q ss_pred CCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 160 SPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
..++||++| +|.|..+..+++..+. +|++++.+++-.+.+++.-.... ++. + .|..+.+++...+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v--i~~-~-----~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIV--LNH-K-----ESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEE--ECT-T-----SCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEE--EEC-C-----ccHHHHHHHhCCCCccE
Confidence 567999995 3457777788887654 99999999999999888421110 111 1 23333444333457998
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
||-... ....++.+.++|+++|.++...
T Consensus 221 v~d~~g----------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 221 VFCTFN----------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEESSC----------HHHHHHHHHHHEEEEEEEEESS
T ss_pred EEECCC----------chHHHHHHHHHhccCCEEEEEC
Confidence 884322 2346788999999999998643
No 345
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.93 E-value=0.048 Score=52.09 Aligned_cols=98 Identities=17% Similarity=0.190 Sum_probs=62.7
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE-cchhhHHhhCCCCCe
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI-GDAVEFLRQVPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~-gD~~~~l~~~~~~~f 235 (387)
...++||+.|+ |.|..+..+++..+ .+|++++.+++-.+.+++. .. +..+.... .|..+.+.+...+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQI-GF------DAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------cEEEecCCHHHHHHHHHHHhCCCC
Confidence 45679999996 56666667777654 4899999999888888543 21 10011101 233344433323579
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||..... +.++.+.+.|+++|.+++..
T Consensus 216 d~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVGG-----------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSCH-----------HHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh-----------HHHHHHHHHHhcCCEEEEEe
Confidence 998865431 24778889999999988643
No 346
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.82 E-value=0.1 Score=50.93 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=62.7
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++. .. + .++..+-.+++++.. +.+|+
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~~~~~~~~a~~l-Ga------~---~vi~~~~~~~~~~~~-~g~Dv 260 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKAL-GA------D---EVVNSRNADEMAAHL-KSFDF 260 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TC------S---EEEETTCHHHHHTTT-TCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------c---EEeccccHHHHHHhh-cCCCE
Confidence 4567999999874 777778888765 4699999999988888873 21 1 122211123343332 47999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
||-....+ ..++.+.+.|+++|.++...
T Consensus 261 vid~~g~~----------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 261 ILNTVAAP----------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEECCSSC----------CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCCH----------HHHHHHHHHhccCCEEEEec
Confidence 88433221 13667888999999988643
No 347
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.80 E-value=0.046 Score=52.59 Aligned_cols=98 Identities=21% Similarity=0.289 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCc-ccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G-~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++||++|+| .|..+..+++..+ .+|++++.+++-.+.+++.-......+. ..|..+.+.+.. +.+|+
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lGa~~~~d~~-------~~~~~~~~~~~~-~~~d~ 233 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLVVNPL-------KEDAAKFMKEKV-GGVHA 233 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHTTCSEEECTT-------TSCHHHHHHHHH-SSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHCCCCEEecCC-------CccHHHHHHHHh-CCCCE
Confidence 456799999975 4777777888765 4999999999999988763111000001 123333333222 46999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
||-... ..+.++.+.+.|+++|.++...
T Consensus 234 vid~~g----------~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 234 AVVTAV----------SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEESSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHhhcCCEEEEec
Confidence 885432 1236788899999999988643
No 348
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.76 E-value=0.057 Score=52.51 Aligned_cols=98 Identities=18% Similarity=0.137 Sum_probs=65.0
Q ss_pred CCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
...++||++| +|.|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+++...+.+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~Ga~~-------~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKSLGCDR-------PINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHcCCcE-------EEecCChhHHHHHHHhcCCCCC
Confidence 4567999999 567888888888765 48999999999888887731110 0000012333334333234799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+||-... . +.++.+.+.|+++|.++...
T Consensus 234 ~vid~~g----~-------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVG----G-------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSC----T-------HHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC----H-------HHHHHHHHHHhcCCEEEEEe
Confidence 9885432 1 36788899999999988644
No 349
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.75 E-value=0.075 Score=51.09 Aligned_cols=95 Identities=14% Similarity=-0.002 Sum_probs=62.0
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcch-hhHHhhC-CCCC
Q 016578 160 SPKTVLVVGGGD-GGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA-VEFLRQV-PRGK 234 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~-~~~l~~~-~~~~ 234 (387)
..++||++|+|. |..+..+++.. + .+|++++.+++-.+.+++.-. + .++.-+- .+++.+. ....
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKN-ITIVGISRSKKHRDFALELGA-------D---YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTT-CEEEEECSCHHHHHHHHHHTC-------S---EEECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHhCC-------C---EEeccccchHHHHHhhcCCC
Confidence 567999999864 66777778764 4 479999999999898887421 1 1121111 1222222 1237
Q ss_pred eeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 235 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 235 fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+|+||-... ..+.++.+.+.|+++|.++...
T Consensus 239 ~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 239 ASIAIDLVG----------TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEEESSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred ccEEEECCC----------ChHHHHHHHHHhhcCCEEEEeC
Confidence 999884432 1236888899999999988643
No 350
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.73 E-value=0.053 Score=52.72 Aligned_cols=95 Identities=18% Similarity=0.133 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE---cchhhHHhhC-CCC
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI---GDAVEFLRQV-PRG 233 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~---gD~~~~l~~~-~~~ 233 (387)
...++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.-. + .++. .|..+.+.+. ...
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFALGA-------D---HGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTC-------S---EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhHHHHHHcCC-------C---EEEcCCcccHHHHHHHHhCCC
Confidence 4567999999765 777777888765 489999999999998877521 1 1122 2333333332 234
Q ss_pred CeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.+|+||-... .. .++.+.+.|+++|.++...
T Consensus 257 g~D~vid~~g---~~--------~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG---GA--------GLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT---SS--------CHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEECCC---hH--------HHHHHHHHhhcCCEEEEEe
Confidence 7998885432 11 3677888999999988643
No 351
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.71 E-value=0.2 Score=48.85 Aligned_cols=101 Identities=24% Similarity=0.360 Sum_probs=59.6
Q ss_pred CCCEEEEEcCc-ccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 160 SPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 160 ~p~~VL~IG~G-~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+++||++|+| .|..+..+++..+. +|+++|.+++-.+.+++.+.. .+.++..+..++.+.. ..+|+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~DvV 234 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETAV--AEADLL 234 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHHH--HTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHHH--cCCCEE
Confidence 35899999974 23334444555554 899999999988887765432 2223322222222211 259999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|.....+......+... ...+.|+++|+++..+
T Consensus 235 I~~~~~~~~~~~~li~~----~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 235 IGAVLVPGRRAPILVPA----SLVEQMRTGSVIVDVA 267 (361)
T ss_dssp EECCCCTTSSCCCCBCH----HHHTTSCTTCEEEETT
T ss_pred EECCCcCCCCCCeecCH----HHHhhCCCCCEEEEEe
Confidence 86554433323333333 4456789999988543
No 352
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.51 E-value=0.063 Score=51.72 Aligned_cols=96 Identities=20% Similarity=0.217 Sum_probs=64.2
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCC-CCCe
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~-~~~f 235 (387)
...++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+... .|..+.+.+.. ...+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSVGA-------DIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHTC-------SEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCC-------cEEecCc-hhHHHHHHHHhCCCCc
Confidence 45679999995 56788888888765 489999999988888887421 1111111 34444443332 3379
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|+||-.... +.++.+.+.|+++|.++.-
T Consensus 229 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 229 DMVVDPIGG-----------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred eEEEECCch-----------hHHHHHHHhhcCCCEEEEE
Confidence 998854432 1367788999999999864
No 353
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.44 E-value=0.056 Score=52.09 Aligned_cols=99 Identities=11% Similarity=0.063 Sum_probs=63.2
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEE-EcchhhHHhhCCCCCe
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH-IGDAVEFLRQVPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~-~gD~~~~l~~~~~~~f 235 (387)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.+. ..|..+.+.+..++.+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~g~-------~~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSIGG-------EVFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHTTC-------CEEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHcCC-------ceEEecCccHhHHHHHHHHhCCCC
Confidence 45679999997 56777777777654 489999999888888776311 1001000 1233333433212279
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||.... ..+.++.+.+.|+++|.++...
T Consensus 240 D~vi~~~g----------~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 240 HGVINVSV----------SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEEECSS----------CHHHHHHHTTSEEEEEEEEECC
T ss_pred CEEEECCC----------cHHHHHHHHHHHhcCCEEEEEe
Confidence 99986543 1246888899999999988643
No 354
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.43 E-value=0.44 Score=48.63 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=79.1
Q ss_pred CEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh------------
Q 016578 162 KTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ------------ 229 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~------------ 229 (387)
-+|+++-||.|++..-+.+.+ ..-|.++|+|+..++.-+.++.. +|...++.+|..++...
T Consensus 89 ~~viDLFaG~GGlslG~~~aG-~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~~ 161 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAAE 161 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTT-EEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHHh
Confidence 389999999999998887763 56789999999999999988742 34556788998887521
Q ss_pred ---CCCCCeeEEEEcCCC-CCCCcc-------------------ccchHHHHHHHHHhccCCCeEEecccccch--hhhH
Q 016578 230 ---VPRGKYDAIIVDSSD-PVGPAQ-------------------ELVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHL 284 (387)
Q Consensus 230 ---~~~~~fDvII~D~~d-p~~~~~-------------------~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--~~~~ 284 (387)
.....+|+|+..++- +...+. .|| .++++ +.+.++|.-+++=++..... ....
T Consensus 162 ~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf-~e~~r-iI~~~rPk~fvlENV~gl~s~~~g~~ 239 (482)
T 3me5_A 162 HIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLF-FDVVR-IIDARRPAMFVLENVKNLKSHDKGKT 239 (482)
T ss_dssp HHHHHSCCCSEEEEECCCCCC------------------CTTTTSHH-HHHHH-HHHHHCCSEEEEEEETTTTTGGGGHH
T ss_pred hhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHH-HHHHH-HHHHcCCcEEEEeCcHHHhcccCCcH
Confidence 001368999976543 121111 122 23333 34467898777745444332 2345
Q ss_pred HHHHHHHHHH
Q 016578 285 IEDMISICRE 294 (387)
Q Consensus 285 ~~~~~~~l~~ 294 (387)
+..+++.+.+
T Consensus 240 f~~i~~~L~~ 249 (482)
T 3me5_A 240 FRIIMQTLDE 249 (482)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 6666666654
No 355
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.42 E-value=0.06 Score=51.64 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=64.2
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE-cchhhHHhhCCCCCe
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI-GDAVEFLRQVPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~-gD~~~~l~~~~~~~f 235 (387)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++.+.. +.-+.... .|..+.+++...+.+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGF------DDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCC------SEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCC------ceEEecCCHHHHHHHHHHHhCCCC
Confidence 45679999995 56777777887755 4899999999988888754421 10000000 133334433223479
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||.... . +.++.+.+.|+++|.+++..
T Consensus 227 d~vi~~~g----------~-~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 227 DIYFENVG----------G-KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEESSC----------H-HHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCC----------H-HHHHHHHHHHhcCCEEEEEc
Confidence 99885442 1 36788899999999988643
No 356
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.35 E-value=0.041 Score=52.91 Aligned_cols=99 Identities=14% Similarity=0.079 Sum_probs=62.3
Q ss_pred CCCCCEEEEEcCc--ccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCC
Q 016578 158 IPSPKTVLVVGGG--DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGK 234 (387)
Q Consensus 158 ~~~p~~VL~IG~G--~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~ 234 (387)
....++||++|+| .|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+.+. ....
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lga~~-------~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRLGAAY-------VIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTSC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhCCCcE-------EEeCCcccHHHHHHHHhCCCC
Confidence 3556799999876 6777788888754 48999999999888888742110 0111112333333332 2347
Q ss_pred eeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 235 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 235 fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+|+||-.... . ......+.|+++|.++.-.
T Consensus 214 ~Dvvid~~g~----------~-~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 214 ADAAIDSIGG----------P-DGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEEESSCH----------H-HHHHHHHTEEEEEEEEECC
T ss_pred CcEEEECCCC----------h-hHHHHHHHhcCCCEEEEEe
Confidence 9988854321 1 2234448999999998653
No 357
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.32 E-value=0.099 Score=50.31 Aligned_cols=91 Identities=14% Similarity=0.072 Sum_probs=62.7
Q ss_pred CCCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 158 IPSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 158 ~~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
....++||++|+|. |..+..+++..+. +|++++.+++-.+.+++. .. + .++ .|.. .+ .+.+|
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~v~-~~~~-~~----~~~~D 236 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM-GV------K---HFY-TDPK-QC----KEELD 236 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT-TC------S---EEE-SSGG-GC----CSCEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc-CC------C---eec-CCHH-HH----hcCCC
Confidence 35677999999865 7777888887654 899999999998988773 21 1 122 3422 22 22799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+||-....+ +.++.+.+.|+++|.++...
T Consensus 237 ~vid~~g~~----------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 237 FIISTIPTH----------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEEECCCSC----------CCHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCcH----------HHHHHHHHHHhcCCEEEEEC
Confidence 988433221 13678889999999998653
No 358
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.30 E-value=0.048 Score=52.19 Aligned_cols=98 Identities=17% Similarity=0.214 Sum_probs=64.4
Q ss_pred CCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCe
Q 016578 159 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~f 235 (387)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+.+. ....+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga~~-------~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEYGAEY-------LINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCcE-------EEeCCCchHHHHHHHHhCCCCc
Confidence 4567999999 456777778888765 48999999999988887742110 0111113444444332 23469
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||-.... +.++.+.+.|+++|.++...
T Consensus 219 D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVGK-----------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCGG-----------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCh-----------HHHHHHHHHhccCCEEEEEc
Confidence 988854321 25778889999999998643
No 359
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.24 E-value=0.067 Score=51.68 Aligned_cols=99 Identities=14% Similarity=0.068 Sum_probs=62.9
Q ss_pred CCC--CEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCC
Q 016578 159 PSP--KTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGK 234 (387)
Q Consensus 159 ~~p--~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~ 234 (387)
... ++||+.|+ |-|..+..+++..+..+|++++.+++-.+.+++.+.. +.-+.....|..+.+.+...+.
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF------DAAINYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC------SEEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC------ceEEecCchHHHHHHHHhcCCC
Confidence 445 89999996 5566666777765544899999999888888764421 1001100123333343322237
Q ss_pred eeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 235 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 235 fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+|+||.... .+.++.+.+.|+++|.++..
T Consensus 231 ~d~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 231 VDVYFDNVG-----------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp EEEEEESCC-----------HHHHHHHHHTEEEEEEEEEC
T ss_pred CCEEEECCC-----------HHHHHHHHHHhccCcEEEEE
Confidence 999885442 13678889999999998864
No 360
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.02 E-value=0.049 Score=52.00 Aligned_cols=98 Identities=10% Similarity=0.057 Sum_probs=64.3
Q ss_pred CCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCe
Q 016578 159 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~f 235 (387)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+.+. ....+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~Ga~~-------~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKALGAWE-------TIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCCE-------EEeCCCccHHHHHHHHhCCCCc
Confidence 4567999998 456777888888754 48999999999999888742110 0111112333334332 23479
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||-.... +.++.+.+.|+++|.++...
T Consensus 211 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ-----------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG-----------GGHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh-----------HHHHHHHHHhcCCCEEEEEe
Confidence 988854321 25778889999999998654
No 361
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.01 E-value=0.27 Score=41.32 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=59.5
Q ss_pred CCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCC-HHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCe
Q 016578 161 PKTVLVVGGGDGGVLREISRHD--SVELIDICEID-KMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKY 235 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD-~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~f 235 (387)
.++|+++|+| .+++.+++.. ...+|+++|.+ ++..+..++.++ ..+.++.+|+.+ .+.+..-+..
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--------DNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--------TTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc--------CCCeEEEcCCCCHHHHHHcChhhC
Confidence 4579999874 5555544321 12589999998 455544443322 257888999753 3443223579
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
|+||+...+.. .........+.+.|...++....+
T Consensus 73 d~vi~~~~~d~-------~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 73 RAILALSDNDA-------DNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp SEEEECSSCHH-------HHHHHHHHHHHHTSSSCEEEECSS
T ss_pred CEEEEecCChH-------HHHHHHHHHHHHCCCCEEEEEECC
Confidence 99997654311 122445566677787777765433
No 362
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.92 E-value=0.065 Score=51.86 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=63.4
Q ss_pred CCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+.+...+.+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lGa~~-------~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACERLGAKR-------GINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCCE-------EEeCCchHHHHHHHHHhCCCce
Confidence 4567999995 456777788888765 48999999999999888742110 0111112333333322245799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+||-.... +.++.+.+.|+++|.++...
T Consensus 238 vvid~~g~-----------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 238 IILDMIGA-----------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEESCCG-----------GGHHHHHHTEEEEEEEEECC
T ss_pred EEEECCCH-----------HHHHHHHHHhccCCEEEEEE
Confidence 88854321 14677889999999988643
No 363
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.92 E-value=0.35 Score=47.44 Aligned_cols=101 Identities=24% Similarity=0.353 Sum_probs=58.3
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 160 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+++|+++|+|. |..+...++..+. +|+++|.+++-.+.+++.+.. .+.+...+..++-+.. ...|+|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l--~~aDvV 235 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV--KRADLV 235 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH--HHCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH--cCCCEE
Confidence 467999999853 3333334444444 899999999988877765431 1222222221211111 258999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|.....|......++.. ...+.|+|||+++..+
T Consensus 236 i~~~~~p~~~t~~li~~----~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 236 IGAVLVPGAKAPKLVSN----SLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EECCCCTTSCCCCCBCH----HHHTTSCTTCEEEEGG
T ss_pred EECCCcCCCCCcceecH----HHHhcCCCCcEEEEEe
Confidence 97554333223344444 4456789999988543
No 364
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.89 E-value=0.065 Score=51.58 Aligned_cols=99 Identities=21% Similarity=0.273 Sum_probs=61.8
Q ss_pred CCCCEEEEEcCc--ccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCC-CC
Q 016578 159 PSPKTVLVVGGG--DGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR-GK 234 (387)
Q Consensus 159 ~~p~~VL~IG~G--~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~-~~ 234 (387)
...++||++|+| .|..+..+++.. + .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+... +.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRAGA-------DYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHhCC-------CEEecCCCccHHHHHHHHhcCCC
Confidence 456799999986 555666666654 4 489999999998888876411 10000001222222333222 47
Q ss_pred eeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 235 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 235 fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+|+||..... .+.++.+.+.|+++|.++...
T Consensus 241 ~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 241 VDAVIDLNNS----------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEEEESCCC----------HHHHTTGGGGEEEEEEEEECC
T ss_pred ceEEEECCCC----------HHHHHHHHHHHhcCCEEEEEC
Confidence 9998854431 235778888999999988643
No 365
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.69 E-value=0.17 Score=48.56 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=63.3
Q ss_pred CCCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCC
Q 016578 158 IPSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGK 234 (387)
Q Consensus 158 ~~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~ 234 (387)
....++||++| +|-|..+..+++..+. +|+++ .+++-.+.+++.-. +. +. ...|..+.+.+. ....
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa-------~~-i~-~~~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGA-------TP-ID-ASREPEDYAAEHTAGQG 216 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTS-------EE-EE-TTSCHHHHHHHHHTTSC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCC-------CE-ec-cCCCHHHHHHHHhcCCC
Confidence 34567999999 4568888888887654 89999 88888888877421 11 22 122333333332 2347
Q ss_pred eeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 235 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 235 fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+|+||-... . +.++.+.+.|+++|.++...
T Consensus 217 ~D~vid~~g----~-------~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 217 FDLVYDTLG----G-------PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEEESSC----T-------HHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEECCC----c-------HHHHHHHHHHhcCCeEEEEc
Confidence 998874332 1 26778889999999998643
No 366
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.61 E-value=0.13 Score=49.34 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=63.3
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCe
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~f 235 (387)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+. ....+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~ga-------~~~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKALGA-------DETVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTC-------SEEEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhcCC-------CEEEcCCcccHHHHHHHHhCCCCc
Confidence 45679999997 67778888888755 489999999998888876311 100110012333333332 22479
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||-... + . .++.+.+.|+++|.++...
T Consensus 237 d~vi~~~g-~--~--------~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 237 DKVVDHTG-A--L--------YFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEEEESSC-S--S--------SHHHHHHHEEEEEEEEESS
T ss_pred eEEEECCC-H--H--------HHHHHHHhhccCCEEEEEe
Confidence 99985443 1 1 3678889999999988643
No 367
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.59 E-value=0.2 Score=49.99 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=59.9
Q ss_pred CCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCeeE
Q 016578 161 PKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYDA 237 (387)
Q Consensus 161 p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~fDv 237 (387)
..+|+++|+|. |......++.. ...|++||.|++.++.+++. .+.++.||+.+ .|+...-+..|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 35799999874 22222233322 25899999999999988753 24578899864 455543457999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
||+...++. .....-...+.+.|+..++..
T Consensus 72 viv~~~~~~-------~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 72 LINAIDDPQ-------TNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp EEECCSSHH-------HHHHHHHHHHHHCTTCEEEEE
T ss_pred EEECCCChH-------HHHHHHHHHHHhCCCCeEEEE
Confidence 998665421 112344555666777655543
No 368
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.49 E-value=0.12 Score=49.27 Aligned_cols=74 Identities=19% Similarity=0.183 Sum_probs=54.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCce--EEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-C-CCCe
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVEL--IDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-P-RGKY 235 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~--Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~-~~~f 235 (387)
.+-+|+++-+|.|++...+.+.+ ..- |.++|+|+..++..+.+++ ...++.+|..++.... + ...+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG-~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLG-IQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTT-BCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCC-CccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCCc
Confidence 44599999999999998887764 333 7899999999998888765 2357788987753221 1 1369
Q ss_pred eEEEEcCC
Q 016578 236 DAIIVDSS 243 (387)
Q Consensus 236 DvII~D~~ 243 (387)
|+|+...+
T Consensus 85 Dll~ggpP 92 (295)
T 2qrv_A 85 DLVIGGSP 92 (295)
T ss_dssp SEEEECCC
T ss_pred CEEEecCC
Confidence 99997654
No 369
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.36 E-value=3.3 Score=45.87 Aligned_cols=152 Identities=12% Similarity=0.111 Sum_probs=92.6
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-----------
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ----------- 229 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~----------- 229 (387)
+-++++|-||.|++..-+.+.+-...+.++|+|+..++.-+.++| ...++.+|..+++..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP---------GSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCccccccHHHHhhhccchhhhhhhh
Confidence 348999999999999888776422567899999999999888875 346777887665311
Q ss_pred --C-CCCCeeEEEEcCCC-CCCCccc------------cchHHHHHHHHHhccCCCeEEecccccch--hhhHHHHHHHH
Q 016578 230 --V-PRGKYDAIIVDSSD-PVGPAQE------------LVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISI 291 (387)
Q Consensus 230 --~-~~~~fDvII~D~~d-p~~~~~~------------L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--~~~~~~~~~~~ 291 (387)
. ..+.+|+|+..++- +...+.. |+ .+|++ +.+.++|.-+++=|+..... ....+..+++.
T Consensus 611 ~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~-~~~~r-iv~~~rPk~~llENV~glls~~~~~~~~~i~~~ 688 (1002)
T 3swr_A 611 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV-VSFLS-YCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRC 688 (1002)
T ss_dssp CBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHH-HHHHH-HHHHHCCSEEEEEEEGGGGTTGGGHHHHHHHHH
T ss_pred hhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHH-HHHHH-HHHHhCCCEEEEeccHHHhccCcchHHHHHHHH
Confidence 1 12368999976542 2222211 11 23443 45567998887755433322 23456667777
Q ss_pred HHHHcCCCcceEEEEeeccCCCc---EEEEEEecCC
Q 016578 292 CRETFKGSVHYAWASVPTYPSGI---IGFLICSTEG 324 (387)
Q Consensus 292 l~~~F~~~v~~~~~~iPtyp~g~---~gf~~ask~~ 324 (387)
+.+.-- .+.+....--.|.--| --|++|++..
T Consensus 689 L~~lGY-~v~~~vLnA~dyGvPQ~R~R~fiva~r~g 723 (1002)
T 3swr_A 689 LVRMGY-QCTFGVLQAGQYGVAQTRRRAIILAAAPG 723 (1002)
T ss_dssp HHHHTC-EEEEEEEEGGGGTCSBCCEEEEEEEECTT
T ss_pred HHhcCC-eEEEEEEEHHHCCCCccceEEEEEEEeCC
Confidence 665522 3444444444452222 3688888753
No 370
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.35 E-value=0.33 Score=41.93 Aligned_cols=95 Identities=16% Similarity=0.228 Sum_probs=54.9
Q ss_pred CCEEEEEcCcc-cH-HHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh--hHHhhC-CCCC
Q 016578 161 PKTVLVVGGGD-GG-VLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV--EFLRQV-PRGK 234 (387)
Q Consensus 161 p~~VL~IG~G~-G~-~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~--~~l~~~-~~~~ 234 (387)
..+|+++|+|. |. +++.+.+. + .+|+++|.|++.++.+++. .++++.+|.. +.+.+. .-+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~~ 105 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTGH 105 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCCC
Confidence 45899999864 22 22333333 3 4799999999888776542 2345666654 234433 2346
Q ss_pred eeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 235 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 235 fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+|+||+...+.. ...... ...+.+.|++.++..+
T Consensus 106 ad~vi~~~~~~~------~~~~~~-~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 106 VKLVLLAMPHHQ------GNQTAL-EQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CCEEEECCSSHH------HHHHHH-HHHHHTTCCSEEEEEE
T ss_pred CCEEEEeCCChH------HHHHHH-HHHHHHCCCCEEEEEE
Confidence 999997654311 011222 3455667777776543
No 371
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.17 E-value=0.17 Score=48.26 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=62.7
Q ss_pred CCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCe
Q 016578 159 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~f 235 (387)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+. ....+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~g~-------~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKLGC-------HHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------CEEEECCCHHHHHHHHHHhCCCCC
Confidence 4567999999 467777888887754 489999999988888876311 100000012323333221 23469
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||..... +.++.+.+.|+++|.++...
T Consensus 216 d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK-----------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT-----------TTHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCcH-----------HHHHHHHHhhccCCEEEEEe
Confidence 999854431 14778889999999988643
No 372
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.08 E-value=0.25 Score=48.11 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=62.6
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
...++||++|+ |.|..+..+++..+. +|+++- +++-.+.+++.=. +.-+.....|..+.+++..++.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGA-------EEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTC-------SEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCC-------cEEEECCCchHHHHHHHHccCCcc
Confidence 45679999997 378888889988654 777774 7888888877421 101111113444445444345699
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhc-cCCCeEEec
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKAL-RPGGVLCNM 274 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~L-kpgGvlv~q 274 (387)
+||-... ..+.++.+.+.| +++|.++.-
T Consensus 234 ~v~d~~g----------~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 234 YALDCIT----------NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEEESSC----------SHHHHHHHHHHSCTTCEEEEES
T ss_pred EEEECCC----------chHHHHHHHHHhhcCCCEEEEE
Confidence 8884332 124678888899 699998864
No 373
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.06 E-value=0.35 Score=46.91 Aligned_cols=95 Identities=19% Similarity=0.204 Sum_probs=59.7
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 160 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+.. + .++..+-.+.+.+.. +.+|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa------~---~v~~~~~~~~~~~~~-~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGA------D---SFLVSRDQEQMQAAA-GTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCC------S---EEEETTCHHHHHHTT-TCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCC------c---eEEeccCHHHHHHhh-CCCCEE
Confidence 567999998653 556667777765 4899999999888877754431 1 111111123344432 479998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|-....+. .++.+.+.|+++|.++...
T Consensus 256 id~~g~~~----------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 256 IDTVSAVH----------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EECCSSCC----------CSHHHHHHEEEEEEEEECC
T ss_pred EECCCcHH----------HHHHHHHHHhcCCEEEEEc
Confidence 85443211 2446678899999988643
No 374
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.98 E-value=0.2 Score=48.44 Aligned_cols=98 Identities=15% Similarity=0.043 Sum_probs=62.1
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCe
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~f 235 (387)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+. ....+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQNGA-------HEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-------SEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHcCC-------CEEEeCCCchHHHHHHHHcCCCCc
Confidence 45679999995 56777777777654 489999999998888776411 100110012323333222 23479
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||.... .+.++...+.|+++|.++...
T Consensus 241 D~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA-----------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH-----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC-----------hHHHHHHHHhccCCCEEEEEe
Confidence 99885432 124677889999999998644
No 375
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.97 E-value=0.32 Score=48.17 Aligned_cols=108 Identities=19% Similarity=0.266 Sum_probs=59.5
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCC-C-CCEEEEE---cc-----hhhHHh
Q 016578 160 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFE-D-PRVRLHI---GD-----AVEFLR 228 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~-d-~rv~v~~---gD-----~~~~l~ 228 (387)
.+.+|++||+|. |..+..+++..+ .+|+++|.++...+.+++.=..+ ..++ + ....... .+ ...-+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~lGa~~-~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRSVGAQW-LDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHHTTCEE-CCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCeE-EeccccccccccchhhhhHHHHhhhHHHHH
Confidence 568999999984 334444455443 48999999999888877631111 0000 0 0000000 00 011122
Q ss_pred hCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 229 QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 229 ~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+. -...|+||.-...|......++++ .+.+.++||.+++-.
T Consensus 261 e~-l~~aDIVI~tv~iPg~~ap~Lvt~----emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 261 DA-ITKFDIVITTALVPGRPAPRLVTA----AAATGMQPGSVVVDL 301 (381)
T ss_dssp HH-HTTCSEEEECCCCTTSCCCCCBCH----HHHHTSCTTCEEEET
T ss_pred HH-HhcCCEEEECCCCCCcccceeecH----HHHhcCCCCcEEEEE
Confidence 21 146999997654454445566665 455578999988853
No 376
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.77 E-value=0.22 Score=48.24 Aligned_cols=93 Identities=20% Similarity=0.249 Sum_probs=58.2
Q ss_pred CCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCH---HHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 161 PKTVLVVGGGD-GGVLREISRHDSVELIDICEIDK---MVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 161 p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~---~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
.++||++|+|. |..+..+++..+. +|++++.++ +-.+.+++.-. + .+. . .|..+.+.+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga-------~-~v~-~-~~~~~~~~~~-~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKT-------N-YYN-S-SNGYDKLKDS-VGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTC-------E-EEE-C-TTCSHHHHHH-HCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCC-------c-eec-h-HHHHHHHHHh-CCCCC
Confidence 67999999742 5555666666544 899999988 77787776411 1 111 0 1222223222 24799
Q ss_pred EEEEcCCCCCCCccccchHHHH-HHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFF-DTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~-~~l~~~LkpgGvlv~q~ 275 (387)
+||-....+ ..+ +.+.+.|+++|.++...
T Consensus 249 ~vid~~g~~----------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 249 VIIDATGAD----------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEEECCCCC----------THHHHHHGGGEEEEEEEEECS
T ss_pred EEEECCCCh----------HHHHHHHHHHHhcCCEEEEEe
Confidence 998544321 146 78889999999988643
No 377
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.76 E-value=0.13 Score=48.72 Aligned_cols=88 Identities=20% Similarity=0.318 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcCc-ccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 158 IPSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 158 ~~~p~~VL~IG~G-~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
....++||++|+| .|..+..+++..+. +|++++ +++-.+.+++.-.. .++ .| . ++. .+.+|
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~----------~v~-~d-~---~~v-~~g~D 201 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVR----------HLY-RE-P---SQV-TQKYF 201 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEE----------EEE-SS-G---GGC-CSCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCC----------EEE-cC-H---HHh-CCCcc
Confidence 3567799999985 47778888887654 999999 88888888774211 122 24 2 222 45799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+|| |+.. .. ....+.++|+++|.++.-
T Consensus 202 vv~-d~~g---~~-------~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 202 AIF-DAVN---SQ-------NAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEE-CC-----------------TTGGGEEEEEEEEEE
T ss_pred EEE-ECCC---ch-------hHHHHHHHhcCCCEEEEE
Confidence 887 3321 10 124567899999998864
No 378
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.74 E-value=0.67 Score=45.18 Aligned_cols=101 Identities=21% Similarity=0.334 Sum_probs=55.2
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 160 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+++|+++|+|. |..+...++..+ .+|+++|.+++-.+.+++.+. ..+.....+..++-+.. ...|+|
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~g--------~~~~~~~~~~~~l~~~~--~~~DvV 233 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVFG--------GRVITLTATEANIKKSV--QHADLL 233 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTT--------TSEEEEECCHHHHHHHH--HHCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhcC--------ceEEEecCCHHHHHHHH--hCCCEE
Confidence 358999999842 333333344444 489999999988777765442 12333333322221111 258999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|.....+......+.. +.+.+.|+++|+++..+
T Consensus 234 i~~~g~~~~~~~~li~----~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVT----RDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSC----HHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHH----HHHHHhhcCCCEEEEEe
Confidence 8765433211223333 34556789999888543
No 379
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.67 E-value=0.57 Score=38.48 Aligned_cols=70 Identities=19% Similarity=0.284 Sum_probs=45.1
Q ss_pred CCEEEEEcCcc-cH-HHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCee
Q 016578 161 PKTVLVVGGGD-GG-VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYD 236 (387)
Q Consensus 161 p~~VL~IG~G~-G~-~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~fD 236 (387)
.++|+++|+|. |. +++.+.+. ..+|+++|.|++.++.+++. .+.++.+|..+ .++...-+.+|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~~d 72 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEGVS 72 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCcccCC
Confidence 35799999864 22 22333333 25899999999988776542 34677788753 34443335799
Q ss_pred EEEEcCC
Q 016578 237 AIIVDSS 243 (387)
Q Consensus 237 vII~D~~ 243 (387)
+||+...
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 9997554
No 380
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.55 E-value=0.51 Score=43.19 Aligned_cols=104 Identities=19% Similarity=0.168 Sum_probs=56.7
Q ss_pred HHHHHhccccCCCCCCEEEEEcCcccHHHHH--HHhcCCCceEEEEeC--CHHHHHHHHhhcccccCCCCCCCEEEEEcc
Q 016578 147 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLRE--ISRHDSVELIDICEI--DKMVIDVSKKYFPELAVGFEDPRVRLHIGD 222 (387)
Q Consensus 147 ~eml~~l~l~~~~~p~~VL~IG~G~G~~~~e--l~k~~~~~~Vt~VEi--D~~vi~~ar~~~~~~~~~~~d~rv~v~~gD 222 (387)
.|.+.++|++..-..++||+||+|.=+..+. +++.+ .+|++|+. ++++.+++.+ .+++++..+
T Consensus 17 ~~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~~~l~~l~~~-----------~~i~~i~~~ 83 (223)
T 3dfz_A 17 IEGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVSAEINEWEAK-----------GQLRVKRKK 83 (223)
T ss_dssp -----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCCHHHHHHHHT-----------TSCEEECSC
T ss_pred ccccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCCHHHHHHHHc-----------CCcEEEECC
Confidence 3567778887667788999999985444332 34443 57888864 4444444432 245665443
Q ss_pred hhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccccc
Q 016578 223 AVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 223 ~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
.. ... -..+|+||....++ +.-..+.+..+ -|++|..+++|
T Consensus 84 ~~---~~d-L~~adLVIaAT~d~----------~~N~~I~~~ak-~gi~VNvvD~p 124 (223)
T 3dfz_A 84 VG---EED-LLNVFFIVVATNDQ----------AVNKFVKQHIK-NDQLVNMASSF 124 (223)
T ss_dssp CC---GGG-SSSCSEEEECCCCT----------HHHHHHHHHSC-TTCEEEC----
T ss_pred CC---HhH-hCCCCEEEECCCCH----------HHHHHHHHHHh-CCCEEEEeCCc
Confidence 22 111 23699999765442 23345555555 89998766543
No 381
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.53 E-value=0.49 Score=47.16 Aligned_cols=110 Identities=15% Similarity=0.242 Sum_probs=61.5
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccC-CC---CC-CCEEEEE---cch-----hh
Q 016578 160 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GF---ED-PRVRLHI---GDA-----VE 225 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~-~~---~d-~rv~v~~---gD~-----~~ 225 (387)
.+.+|++||+|. |..+..+++..+ .+|+++|+++...+.+++.-..+.. .. ++ .....+. .+. ..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 467999999984 444445555554 4899999999988888774111100 00 00 0000000 000 01
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
-+.+. -...|+||.-...|...+..|+++ .+.+.+|||.+++-.+
T Consensus 268 ~l~e~-l~~aDVVI~tvlipg~~ap~Lvt~----emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 268 LVAEH-IAKQDIVITTALIPGRPAPRLVTR----EMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHH-HHTCSEEEECCCCSSSCCCCCBCH----HHHTTSCTTCEEEETT
T ss_pred HHHHH-hcCCCEEEECCcCCCCCCCEEecH----HHHhcCCCCCEEEEEe
Confidence 11111 136899997655554455667776 4556789999988543
No 382
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.51 E-value=0.19 Score=47.61 Aligned_cols=91 Identities=15% Similarity=0.205 Sum_probs=61.0
Q ss_pred EEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 163 TVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 163 ~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
+||++|+ |.|..+..+++..+. +|++++.+++-.+.+++.=. + .++..+-...++....+.+|+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~~~~~~~d~v~- 216 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGA-------N---RILSRDEFAESRPLEKQLWAGAI- 216 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTC-------S---EEEEGGGSSCCCSSCCCCEEEEE-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC-------C---EEEecCCHHHHHhhcCCCccEEE-
Confidence 4999985 678888889998754 89999999998898887411 1 11111111112222345799876
Q ss_pred cCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 241 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 241 D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|.. + .+.++.+.++|+++|.++.-.
T Consensus 217 d~~---g-------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 217 DTV---G-------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp ESS---C-------HHHHHHHHHTEEEEEEEEECC
T ss_pred ECC---C-------cHHHHHHHHHHhcCCEEEEEe
Confidence 332 1 136888999999999998643
No 383
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.51 E-value=0.27 Score=47.47 Aligned_cols=95 Identities=14% Similarity=0.111 Sum_probs=59.8
Q ss_pred CCCEEEEEcCc-ccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 160 SPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 160 ~p~~VL~IG~G-~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..++||++|+| -|..+..+++..+ .+|++++.+++-.+.+++.+.. + . ++..+-.+.+++.. +.+|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa------~-~--vi~~~~~~~~~~~~-~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGA------D-D--YVIGSDQAKMSELA-DSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCC------S-C--EEETTCHHHHHHST-TTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCC------c-e--eeccccHHHHHHhc-CCCCEE
Confidence 56799999865 3566667777654 4899999999888888744431 1 1 11111123344432 479988
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|-....+. .++...+.|+++|.++...
T Consensus 249 id~~g~~~----------~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 249 IDTVPVHH----------ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EECCCSCC----------CSHHHHTTEEEEEEEEECS
T ss_pred EECCCChH----------HHHHHHHHhccCCEEEEeC
Confidence 84332211 2456778999999998643
No 384
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.44 E-value=0.26 Score=41.58 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh--hHHhhCCCCCe
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV--EFLRQVPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~--~~l~~~~~~~f 235 (387)
....+|+++|+|. |......++..+ .+|+++|.+++.++.+++ ...+.++.+|.. +.+....-..+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG-HSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCcccC
Confidence 3467999999864 322222233323 489999999876543321 113455666653 23333212469
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
|+||....++. .......+.+.+.+...++....+
T Consensus 86 d~Vi~~~~~~~-------~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 86 DMVFAFTNDDS-------TNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp SEEEECSSCHH-------HHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CEEEEEeCCcH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 99997654311 112333444555666666654433
No 385
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.39 E-value=0.22 Score=48.13 Aligned_cols=98 Identities=11% Similarity=0.098 Sum_probs=61.4
Q ss_pred CCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC-CCCCe
Q 016578 159 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV-PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~-~~~~f 235 (387)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+-+.+. ....+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKLGAAA-------GFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHcCCcE-------EEecCChHHHHHHHHHhcCCCc
Confidence 4567999998 456777777777654 48999999999888886541110 0000012333333322 23469
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||..... +.++.+.+.|+++|.++...
T Consensus 233 d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 233 NLILDCIGG-----------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEESSCG-----------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCc-----------hHHHHHHHhccCCCEEEEEe
Confidence 999855431 13667788999999988643
No 386
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.36 E-value=0.16 Score=48.35 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=61.3
Q ss_pred CCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-CCCCCe
Q 016578 159 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ-VPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~-~~~~~f 235 (387)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+-+.+ .....+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKAGAWQ-------VINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHcCCCE-------EEECCCccHHHHHHHHhCCCCc
Confidence 4567999998 456666666676544 48999999998888887631100 000001222232322 223469
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+||.... . +.++.+.+.|+++|.++...
T Consensus 211 D~vi~~~g----~-------~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG----R-------DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC----G-------GGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCc----h-------HHHHHHHHHhcCCCEEEEEe
Confidence 99985542 1 24778899999999988643
No 387
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.34 E-value=1.5 Score=41.72 Aligned_cols=92 Identities=15% Similarity=0.084 Sum_probs=59.4
Q ss_pred CCEEEEEcCcc--cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh-HHhhCCCCCeeE
Q 016578 161 PKTVLVVGGGD--GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVPRGKYDA 237 (387)
Q Consensus 161 p~~VL~IG~G~--G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~-~l~~~~~~~fDv 237 (387)
..+|.+||+|. +.+++.+.+.+...+|+++|.+++.++.+++.- ..+ -...|..+ .+ ...|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G------~~~----~~~~~~~~~~~-----~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG------IID----EGTTSIAKVED-----FSPDF 97 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT------SCS----EEESCTTGGGG-----GCCSE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC------Ccc----hhcCCHHHHhh-----ccCCE
Confidence 46899999984 344555665543348999999999888776531 111 12234333 22 25899
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
||+..+.. ...+.++.+...|+++.+++..
T Consensus 98 Vilavp~~-------~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 98 VMLSSPVR-------TFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp EEECSCGG-------GHHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEeCCHH-------HHHHHHHHHhhccCCCcEEEEC
Confidence 99865421 1456788898999998877643
No 388
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.33 E-value=0.17 Score=49.03 Aligned_cols=97 Identities=20% Similarity=0.174 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCc-ccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchh-hHHhhCCCCCee
Q 016578 159 PSPKTVLVVGGG-DGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAV-EFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G-~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~-~~l~~~~~~~fD 236 (387)
...++||++|+| .|..+..+++..+ .+|++++.+++-.+.+++. .. + .++..+-. ++.+... +.+|
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~-~~~D 245 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMG-AETYVISRSSRKREDAMKM-GA------D---HYIATLEEGDWGEKYF-DTFD 245 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH-TC------S---EEEEGGGTSCHHHHSC-SCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc-CC------C---EEEcCcCchHHHHHhh-cCCC
Confidence 456799999965 4677777888654 4799999999888888873 21 1 12221111 2333332 4799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+||-...... + +.++.+.+.|+++|.++...
T Consensus 246 ~vid~~g~~~-~-------~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 246 LIVVCASSLT-D-------IDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEECCSCST-T-------CCTTTGGGGEEEEEEEEECC
T ss_pred EEEECCCCCc-H-------HHHHHHHHHhcCCCEEEEec
Confidence 9885433200 0 12445667899999988643
No 389
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.26 E-value=0.32 Score=45.59 Aligned_cols=91 Identities=13% Similarity=0.077 Sum_probs=61.3
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcch-hhHHhhCCCCCe
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA-VEFLRQVPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~-~~~l~~~~~~~f 235 (387)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. .. + .++..+- .++.+.. +.+
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga------~---~~~~~~~~~~~~~~~--~~~ 190 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLAL-GA------E---EAATYAEVPERAKAW--GGL 190 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHHT-TC------S---EEEEGGGHHHHHHHT--TSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------C---EEEECCcchhHHHHh--cCc
Confidence 45679999996 55777778888765 4899999999888888763 10 1 1222211 2333332 469
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|+||- ... . .++.+.+.|+++|.++..
T Consensus 191 d~vid-~g~---~--------~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 191 DLVLE-VRG---K--------EVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEE-CSC---T--------THHHHHTTEEEEEEEEEC
T ss_pred eEEEE-CCH---H--------HHHHHHHhhccCCEEEEE
Confidence 99886 432 1 367888999999998864
No 390
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.23 E-value=0.033 Score=67.46 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=49.5
Q ss_pred CEEEEEcCcccHHHHHHHhcCC-----CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 162 KTVLVVGGGDGGVLREISRHDS-----VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~~-----~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
.+||+||.|+|..+..+++... ..+.+..|+++.+.+.+++.|..+ .++.-.-|..+. .......||
T Consensus 1242 ~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-------di~~~~~d~~~~-~~~~~~~yd 1313 (2512)
T 2vz8_A 1242 MKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-------HVTQGQWDPANP-APGSLGKAD 1313 (2512)
T ss_dssp EEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-------TEEEECCCSSCC-CC-----CC
T ss_pred ceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-------cccccccccccc-ccCCCCcee
Confidence 4999999999988777665421 347899999999888888877543 121110111000 000134699
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+||....-+..+ . ..+.++.+++.|+|||.+++.
T Consensus 1314 lvia~~vl~~t~--~--~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1314 LLVCNCALATLG--D--PAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp EEEEECC------------------------CCEEEEE
T ss_pred EEEEcccccccc--c--HHHHHHHHHHhcCCCcEEEEE
Confidence 999653221111 1 124688999999999988764
No 391
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.91 E-value=0.071 Score=51.36 Aligned_cols=62 Identities=13% Similarity=-0.022 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHH
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFL 227 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l 227 (387)
.....|||--||+|.++.++.+.. .+.+++|+++..++.+++++... ....+.+..|+.+..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~i~ 312 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLDN-----NISEEKITDIYNRIL 312 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCS-----CSCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhc-----ccchHHHHHHHHHHH
Confidence 456789999999999999988875 69999999999999999998654 223555666666654
No 392
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.64 E-value=0.75 Score=40.91 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=57.2
Q ss_pred EEEEEcCcccHHHHHHHhc--CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCeeEE
Q 016578 163 TVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYDAI 238 (387)
Q Consensus 163 ~VL~IG~G~G~~~~el~k~--~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~fDvI 238 (387)
+|+++|+| .++..+++. ....+|+++|.|++.++...+.+ .+.++.+|+.+ .+++..-+..|+|
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----------~~~~i~gd~~~~~~l~~a~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----------KATIIHGDGSHKEILRDAEVSKNDVV 69 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----------SSEEEESCTTSHHHHHHHTCCTTCEE
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----------CCeEEEcCCCCHHHHHhcCcccCCEE
Confidence 68999975 444444332 11358999999999887654432 35678888764 3433323579999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+...+.. ...+.....+.+.+...++...
T Consensus 70 i~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 70 VILTPRDE-------VNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp EECCSCHH-------HHHHHHHHHHHTSCCCEEEECC
T ss_pred EEecCCcH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 97654421 1224455556666777666544
No 393
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.36 E-value=2.7 Score=33.70 Aligned_cols=92 Identities=16% Similarity=0.148 Sum_probs=52.0
Q ss_pred CCEEEEEcCcccHHHHHH----HhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCC
Q 016578 161 PKTVLVVGGGDGGVLREI----SRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGK 234 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el----~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~ 234 (387)
..+|+++|+|. ++..+ .+.. .+|+++|.+++.++..++.+ .+.++.+|..+ .+....-..
T Consensus 4 ~m~i~IiG~G~--iG~~~a~~L~~~g--~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~ 69 (140)
T 1lss_A 4 GMYIIIAGIGR--VGYTLAKSLSEKG--HDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIED 69 (140)
T ss_dssp -CEEEEECCSH--HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTT
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCccc
Confidence 35899998764 33333 3332 58999999998776655432 23455666532 233222346
Q ss_pred eeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 235 YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 235 fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
+|+||+...++ . .......+.+.+.++-+++.
T Consensus 70 ~d~vi~~~~~~---~----~~~~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 70 ADMYIAVTGKE---E----VNLMSSLLAKSYGINKTIAR 101 (140)
T ss_dssp CSEEEECCSCH---H----HHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEeeCCc---h----HHHHHHHHHHHcCCCEEEEE
Confidence 99999865431 0 11234445566777644443
No 394
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.03 E-value=2.3 Score=41.26 Aligned_cols=140 Identities=11% Similarity=0.140 Sum_probs=81.3
Q ss_pred CCEEEEEcCcccHH--HHHHHhcCCCceEEEEeCCHHHHHHHHhh------cccccCCCCCCCEEEEEcchhhHHhhCCC
Q 016578 161 PKTVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSKKY------FPELAVGFEDPRVRLHIGDAVEFLRQVPR 232 (387)
Q Consensus 161 p~~VL~IG~G~G~~--~~el~k~~~~~~Vt~VEiD~~vi~~ar~~------~~~~~~~~~d~rv~v~~gD~~~~l~~~~~ 232 (387)
..+|.+||+|.-+. +..+++.. .+|++++.+++.++..++. ++.. .+ .+++++ ..|..+-+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G--~~V~l~~r~~~~~~~i~~~~~~~~~l~g~--~l-~~~i~~-t~d~~ea~----- 97 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG--QKVRLWSYESDHVDEMQAEGVNNRYLPNY--PF-PETLKA-YCDLKASL----- 97 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT--CCEEEECSCHHHHHHHHHHSSBTTTBTTC--CC-CTTEEE-ESCHHHHH-----
T ss_pred CCeEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCcccCCCC--cc-CCCeEE-ECCHHHHH-----
Confidence 45899999986443 34444443 5799999999988877663 2211 11 234443 34544433
Q ss_pred CCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCC
Q 016578 233 GKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPS 312 (387)
Q Consensus 233 ~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~ 312 (387)
...|+||+-.+. . ..++.++.+...|+++-+++......-. .. ..+.+.+++.++ ...+....-|.+..
T Consensus 98 ~~aDvVilaVp~-----~--~~~~vl~~i~~~l~~~~ivvs~~kGi~~--~t-~~~se~i~~~l~-~~~~~vlsgP~~a~ 166 (356)
T 3k96_A 98 EGVTDILIVVPS-----F--AFHEVITRMKPLIDAKTRIAWGTKGLAK--GS-RLLHEVVATELG-QVPMAVISGPSLAT 166 (356)
T ss_dssp TTCCEEEECCCH-----H--HHHHHHHHHGGGCCTTCEEEECCCSCBT--TT-BCHHHHHHHHHC-SCCEEEEESSCCHH
T ss_pred hcCCEEEECCCH-----H--HHHHHHHHHHHhcCCCCEEEEEeCCCCc--Cc-cCHHHHHHHHcC-CCCEEEEECccHHH
Confidence 247999976542 1 3556788888888888776643211111 11 334455566676 34556667787653
Q ss_pred ----Cc-EEEEEEec
Q 016578 313 ----GI-IGFLICST 322 (387)
Q Consensus 313 ----g~-~gf~~ask 322 (387)
+. ...++++.
T Consensus 167 ev~~g~pt~~via~~ 181 (356)
T 3k96_A 167 EVAANLPTAVSLASN 181 (356)
T ss_dssp HHHTTCCEEEEEEES
T ss_pred HHHcCCCeEEEEecC
Confidence 23 23455554
No 395
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=90.92 E-value=0.43 Score=47.37 Aligned_cols=48 Identities=13% Similarity=0.194 Sum_probs=40.9
Q ss_pred CCCCEEEEEcCcccHHHHHHH-hcCC-CceEEEEeCCHHHHHHHHhhccc
Q 016578 159 PSPKTVLVVGGGDGGVLREIS-RHDS-VELIDICEIDKMVIDVSKKYFPE 206 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~-k~~~-~~~Vt~VEiD~~vi~~ar~~~~~ 206 (387)
++...|+|||++.|..+..++ +..+ ..+|+++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 556799999999999999988 5443 37999999999999999998765
No 396
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.86 E-value=0.62 Score=46.20 Aligned_cols=42 Identities=17% Similarity=0.257 Sum_probs=30.8
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHh
Q 016578 160 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKK 202 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~ 202 (387)
.+++|++||+|. |..+..+++..+ .+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHH
Confidence 468999999874 444445566555 489999999988777755
No 397
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.80 E-value=0.61 Score=46.62 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=63.2
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEE----cch------hhH
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHI----GDA------VEF 226 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~----gD~------~~~ 226 (387)
...++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++.-........++.+.+.. .|. .+.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 45679999985 56788888888765 588888899999999877421110001111111000 011 122
Q ss_pred HhhC-CCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 227 LRQV-PRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 227 l~~~-~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
+++. ....+|+||-... . +.++.+.+.|+++|.+++.
T Consensus 306 i~~~t~g~g~Dvvid~~G----------~-~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPG----------R-ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHTSCCEEEEEECSC----------H-HHHHHHHHHEEEEEEEEES
T ss_pred HHHHhCCCCCcEEEEcCC----------c-hhHHHHHHHhhCCcEEEEE
Confidence 3222 2357998874321 1 3688889999999999864
No 398
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.76 E-value=0.22 Score=47.29 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=56.7
Q ss_pred EEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 163 TVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 163 ~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
+||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.....| .+.++....+.+|+||-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~-~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVL-GA------KEVLAREDVM-AERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHT-TC------SEEEECC----------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHc-CC------cEEEecCCcH-HHHHHHhcCCcccEEEE
Confidence 7999995 66778888888765 4799999998888888763 21 1001100111 11222222347998874
Q ss_pred cCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 241 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 241 D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.... . .++.+.+.|+++|.++...
T Consensus 223 ~~g~---~--------~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 223 PVGG---R--------TLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CSTT---T--------THHHHHHTEEEEEEEEECS
T ss_pred CCcH---H--------HHHHHHHhhccCCEEEEEe
Confidence 3321 1 3667888999999998643
No 399
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.66 E-value=0.88 Score=44.61 Aligned_cols=42 Identities=17% Similarity=0.217 Sum_probs=30.8
Q ss_pred CCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHh
Q 016578 160 SPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKK 202 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~ 202 (387)
.+++|+++|+|. |..+..+++..+. +|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 478999999874 4444455665554 69999999887777766
No 400
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.57 E-value=2.6 Score=42.70 Aligned_cols=109 Identities=16% Similarity=0.167 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCcccH--HHHHHHhcCCCceEEEEeCCHHHHHHHHhhc-ccccCCCC--------CCCEEEEEcchhhHH
Q 016578 159 PSPKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYF-PELAVGFE--------DPRVRLHIGDAVEFL 227 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~--~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~-~~~~~~~~--------d~rv~v~~gD~~~~l 227 (387)
....+|.+||+|.=+ ++..+++.+ -+|+++|+|++.++..++.- +....+++ ..++++ ..|..+-+
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~ 82 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV 82 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH
T ss_pred CCCceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh
Confidence 445699999999533 344555553 47999999999999887742 11000100 123433 33433333
Q ss_pred hhCCCCCeeEEEEcCCCCC---CCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 228 RQVPRGKYDAIIVDSSDPV---GPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 228 ~~~~~~~fDvII~D~~dp~---~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
. ..|+||+..+.|. +.++--+..+.++.+...|+++-+++..+
T Consensus 83 ~-----~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 83 A-----HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp H-----HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred h-----cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 2 4789998876653 22222345667888888999988776544
No 401
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.55 E-value=1.7 Score=38.97 Aligned_cols=96 Identities=17% Similarity=0.091 Sum_probs=58.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCC--CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCe
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDS--VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKY 235 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~--~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~f 235 (387)
..++|+++|+| .++..+++... .. |+++|.|++.++.++ . .+.++.+|+.+ .+....-+..
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~---------~~~~i~gd~~~~~~l~~a~i~~a 72 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR---S---------GANFVHGDPTRVSDLEKANVRGA 72 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---T---------TCEEEESCTTCHHHHHHTTCTTC
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---c---------CCeEEEcCCCCHHHHHhcCcchh
Confidence 34689999985 66666655421 24 999999998876654 1 36788898863 4444323578
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
|+||+...+.. .........+.+.|+..++..+.+
T Consensus 73 d~vi~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 73 RAVIVDLESDS-------ETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp SEEEECCSCHH-------HHHHHHHHHHHHCSSSEEEEECSS
T ss_pred cEEEEcCCCcH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 99997654310 112344555667887666655433
No 402
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=90.51 E-value=0.26 Score=42.84 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhC---CCCCe
Q 016578 159 PSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQV---PRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~---~~~~f 235 (387)
.-+.-||++|.|+|.+=-.+....+..+|.++|-.-. -.|. + ..|.-.++.||+++.+... -..+.
T Consensus 39 ~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~-------~hp~--~--~P~~e~~ilGdi~~tL~~~~~r~g~~a 107 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVA-------SHPD--S--TPPEAQLILGDIRETLPATLERFGATA 107 (174)
T ss_dssp TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCC-------CCGG--G--CCCGGGEEESCHHHHHHHHHHHHCSCE
T ss_pred CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeec-------cCCC--C--CCchHheecccHHHHHHHHHHhcCCce
Confidence 3456799999999999999988888899999995211 1111 1 2345578999999987652 13345
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
-+|-.|.-......+.-+..-.=..+..+|.|||+++.
T Consensus 108 ~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 108 SLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp EEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 55556654322111111122233466778999999985
No 403
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.26 E-value=0.48 Score=47.10 Aligned_cols=99 Identities=11% Similarity=0.087 Sum_probs=62.3
Q ss_pred CCCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcch------------
Q 016578 158 IPSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA------------ 223 (387)
Q Consensus 158 ~~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~------------ 223 (387)
....++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~lGa-------~~~i~~~~~~~~~~~~~~~~~~~ 289 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRALGC-------DLVINRAELGITDDIADDPRRVV 289 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-------CCEEEHHHHTCCTTGGGCHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCC-------CEEEecccccccccccccccccc
Confidence 345679999995 56777888888764 588889999999888876411 11111000110
Q ss_pred ------hhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 224 ------VEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 224 ------~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.+.+.+.....+|+||-... .+.++...+.|+++|.++...
T Consensus 290 ~~~~~~~~~v~~~~g~g~Dvvid~~G-----------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 290 ETGRKLAKLVVEKAGREPDIVFEHTG-----------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECSC-----------HHHHHHHHHHSCTTCEEEESC
T ss_pred hhhhHHHHHHHHHhCCCceEEEECCC-----------chHHHHHHHHHhcCCEEEEEe
Confidence 12222222346998885332 135778889999999988653
No 404
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.24 E-value=5.6 Score=39.85 Aligned_cols=139 Identities=16% Similarity=0.145 Sum_probs=76.7
Q ss_pred CEEEEEcCcccH--HHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccc-cCCCC--------CCCEEEEEcchhhHHhhC
Q 016578 162 KTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPEL-AVGFE--------DPRVRLHIGDAVEFLRQV 230 (387)
Q Consensus 162 ~~VL~IG~G~G~--~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~-~~~~~--------d~rv~v~~gD~~~~l~~~ 230 (387)
.+|.+||+|.=+ ++..+++.+ .+|+++|+|++.++..++..... ..+++ ..++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV--- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG---
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH---
Confidence 489999998433 334455543 48999999999988877632111 00000 224443 34544433
Q ss_pred CCCCeeEEEEcCCCCCCC---ccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCC---CcceEE
Q 016578 231 PRGKYDAIIVDSSDPVGP---AQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKG---SVHYAW 304 (387)
Q Consensus 231 ~~~~fDvII~D~~dp~~~---~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~---~v~~~~ 304 (387)
...|+||+..+.|... ++--+-.+.++.+...|+++-+++..+..+ +...+.+.+.+++.... .+.+..
T Consensus 77 --~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~---pgt~~~l~~~l~~~~~~~~~~~d~~v 151 (450)
T 3gg2_A 77 --PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVP---VGSYRLIRKAIQEELDKREVLIDFDI 151 (450)
T ss_dssp --GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC---TTHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred --hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCC---CcchHHHHHHHHHhccccCcCcceeE
Confidence 2479999877665321 221234567788888898887777544322 22333444444443210 133455
Q ss_pred EEeeccC
Q 016578 305 ASVPTYP 311 (387)
Q Consensus 305 ~~iPtyp 311 (387)
.+-|.+-
T Consensus 152 ~~~Pe~a 158 (450)
T 3gg2_A 152 ASNPEFL 158 (450)
T ss_dssp EECCCCC
T ss_pred Eechhhh
Confidence 6667653
No 405
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.01 E-value=4 Score=39.27 Aligned_cols=108 Identities=14% Similarity=0.139 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCcc-cH-HHHHHHhcCCCceEEEEeCCHHHHHH----HHhhcccccCCCCCCCEEEEEcchhhHHhhCCC
Q 016578 159 PSPKTVLVVGGGD-GG-VLREISRHDSVELIDICEIDKMVIDV----SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPR 232 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~-~~~el~k~~~~~~Vt~VEiD~~vi~~----ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~ 232 (387)
.++.+|.+||+|. |. ++..++..+-..+++.+|++++.++- .+.-++.. ..++++..+|... .
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~-----~~~v~i~~~~~~a----~-- 71 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA-----PQPVKTSYGTYED----C-- 71 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGS-----SSCCEEEEECGGG----G--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccc-----cCCeEEEeCcHHH----h--
Confidence 3467999999864 22 22334444433589999999876554 22223322 2356666666322 2
Q ss_pred CCeeEEEEcCCCCCCCcc---ccc--hHHHHHHHHHh---ccCCCeEEeccccc
Q 016578 233 GKYDAIIVDSSDPVGPAQ---ELV--EKPFFDTIAKA---LRPGGVLCNMAESM 278 (387)
Q Consensus 233 ~~fDvII~D~~dp~~~~~---~L~--~~ef~~~l~~~---LkpgGvlv~q~~s~ 278 (387)
...|+||+-...|..+.. .|+ +...++.+.+. ..|++++++.+ ||
T Consensus 72 ~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt-NP 124 (326)
T 3pqe_A 72 KDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT-NP 124 (326)
T ss_dssp TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS-SS
T ss_pred CCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC-Ch
Confidence 248999987655544421 222 12233333333 36899877643 44
No 406
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.99 E-value=3.4 Score=41.78 Aligned_cols=108 Identities=14% Similarity=0.146 Sum_probs=63.1
Q ss_pred CEEEEEcCcccH--HHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccc-cCCCC-------CCCEEEEEcchhhHHhhCC
Q 016578 162 KTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPEL-AVGFE-------DPRVRLHIGDAVEFLRQVP 231 (387)
Q Consensus 162 ~~VL~IG~G~G~--~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~-~~~~~-------d~rv~v~~gD~~~~l~~~~ 231 (387)
.+|.+||+|.=+ ++..+++.....+|+++|+|++.++..++..... ..+++ ..++++ ..|..+-+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~--- 85 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIA--- 85 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhh---
Confidence 489999999544 3455666532358999999999988776521100 00000 012332 234333332
Q ss_pred CCCeeEEEEcCCCCCCC--------ccccchHHHHHHHHHhccCCCeEEecc
Q 016578 232 RGKYDAIIVDSSDPVGP--------AQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 232 ~~~fDvII~D~~dp~~~--------~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
..|+||+..+.|... ++--+..+.++.+.+.|+++-+++..+
T Consensus 86 --~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 86 --EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS 135 (481)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred --cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 479999887665421 111134567788888999987777544
No 407
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.67 E-value=3 Score=37.83 Aligned_cols=78 Identities=8% Similarity=0.057 Sum_probs=47.8
Q ss_pred CCCEEEEEcCccc-HHHH----HHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------Hh
Q 016578 160 SPKTVLVVGGGDG-GVLR----EISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LR 228 (387)
Q Consensus 160 ~p~~VL~IG~G~G-~~~~----el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~ 228 (387)
+.++||+.|++++ ++++ .+++.+ .+|++++.++...+.+++..... ...++.++..|..+. ++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAG--ARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHHH
Confidence 4678999997633 3444 444443 58999998876655555544332 234788888887532 21
Q ss_pred hC--CCCCeeEEEEcCC
Q 016578 229 QV--PRGKYDAIIVDSS 243 (387)
Q Consensus 229 ~~--~~~~fDvII~D~~ 243 (387)
.. .-++.|++|....
T Consensus 80 ~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHhCCeeEEEEccc
Confidence 11 0147899998754
No 408
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.37 E-value=0.45 Score=45.18 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=57.9
Q ss_pred EEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEc-ch-hhHHhhCCCCCeeEE
Q 016578 163 TVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG-DA-VEFLRQVPRGKYDAI 238 (387)
Q Consensus 163 ~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~g-D~-~~~l~~~~~~~fDvI 238 (387)
+||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. .. + .++.. |. .+.++....+.+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQL-GA------S---EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHH-TC------S---EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------c---EEEECCCchHHHHHHhhcCCccEE
Confidence 7999995 56777778888754 4799999988888888763 21 1 11111 11 111222223469988
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|-... . +.++...+.|+++|.++...
T Consensus 222 id~~g----~-------~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 222 VDPVG----G-------KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EESCC----T-------HHHHHHHTTEEEEEEEEECC
T ss_pred EECCc----H-------HHHHHHHHhhcCCCEEEEEe
Confidence 74332 1 25778889999999998643
No 409
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.22 E-value=0.68 Score=42.68 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=22.6
Q ss_pred CCEEEEEcCcc-cHH-HHHHHhcCCCceEEEEeCCH
Q 016578 161 PKTVLVVGGGD-GGV-LREISRHDSVELIDICEIDK 194 (387)
Q Consensus 161 p~~VL~IG~G~-G~~-~~el~k~~~~~~Vt~VEiD~ 194 (387)
.++||+||+|. |.. +..+++. ++.+|+.+|.|.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 46999999873 222 2333344 578999999997
No 410
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=89.16 E-value=0.37 Score=46.28 Aligned_cols=96 Identities=13% Similarity=0.040 Sum_probs=55.3
Q ss_pred CCCCEEEEEcC--cccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVGG--GDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~--G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
...++||++|+ |.|..+..+++.....+|++++ +++-.+.++ +.. +.-+. ...|..+-+++...+.+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga------~~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV------THLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS------SEEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC------cEEEc-CCccHHHHHHHhcCCCce
Confidence 45679999986 4577777888875456888887 454445554 221 11111 123344444443345799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+||-....+ .++.+.++|+++|.++.-.
T Consensus 211 vv~d~~g~~-----------~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLCGD-----------NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC------------------CTTEEEEEEEEEEC
T ss_pred EEEECCCch-----------hHHHHHHHhhcCCEEEEEC
Confidence 888433211 2356778999999998643
No 411
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.08 E-value=6.7 Score=37.21 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=58.5
Q ss_pred CCCEEEEEcCcccH--HHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 160 SPKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG~G~G~--~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
++.+|.+||+|.=+ ++..++......+|+.+|++++..+....-+.+. ..+...++++..+|.. .. ...|+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~----al--~~aDv 77 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYD----DC--RDADL 77 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGG----GT--TTCSE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHH----Hh--CCCCE
Confidence 45699999997422 3333444444568999999987544211112111 0111235566654422 22 25899
Q ss_pred EEEcCCCCCCCcc---ccc------hHHHHHHHHHhccCCCeEEeccccc
Q 016578 238 IIVDSSDPVGPAQ---ELV------EKPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 238 II~D~~dp~~~~~---~L~------~~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
||+-...+..+.. .+. ..++.+.+.+. .|++++++- .||
T Consensus 78 Viia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~-tNP 125 (316)
T 1ldn_A 78 VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVA-TNP 125 (316)
T ss_dssp EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEEC-SSS
T ss_pred EEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEe-CCc
Confidence 9987655443311 111 13344555554 599987763 344
No 412
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=88.93 E-value=11 Score=42.89 Aligned_cols=151 Identities=13% Similarity=0.116 Sum_probs=89.3
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhh-----------
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQ----------- 229 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~----------- 229 (387)
.-++++|-+|.|++..-+.+.+-..-+.++|+|+..++.-+.+++ ...++.+|..+++..
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~gdi~~~~~ 921 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP---------GTTVFTEDCNVLLKLVMAGEVTNSLG 921 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHTTTCSBCSSC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCcEeeccHHHHhHhhhccchhhhhh
Confidence 348999999999999988766422568899999999999888875 345677887765421
Q ss_pred --CC-CCCeeEEEEcCCC-CCCCccc------------cchHHHHHHHHHhccCCCeEEecccccch--hhhHHHHHHHH
Q 016578 230 --VP-RGKYDAIIVDSSD-PVGPAQE------------LVEKPFFDTIAKALRPGGVLCNMAESMWL--HTHLIEDMISI 291 (387)
Q Consensus 230 --~~-~~~fDvII~D~~d-p~~~~~~------------L~~~ef~~~l~~~LkpgGvlv~q~~s~~~--~~~~~~~~~~~ 291 (387)
.+ .+.+|+|+...+- +...+.. |+ .+|++ +.+.++|.-+++=++..... ....+..+++.
T Consensus 922 ~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~-~~~lr-iv~~~rPk~fv~ENV~glls~~~g~~~~~il~~ 999 (1330)
T 3av4_A 922 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV-VSFLS-YCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRC 999 (1330)
T ss_dssp CBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHH-HHHHH-HHHHHCCSEEEEEEEGGGGTTTTTHHHHHHHHH
T ss_pred hhccccCccceEEecCCCcccccccccccccccchhhHHH-HHHHH-HHHHhcCcEEEEeccHHHhccCccHHHHHHHHH
Confidence 11 2368999976543 2222211 11 23444 44567998777644433322 22356666666
Q ss_pred HHHHcCCCcceEEEEeeccCCCc---EEEEEEecC
Q 016578 292 CRETFKGSVHYAWASVPTYPSGI---IGFLICSTE 323 (387)
Q Consensus 292 l~~~F~~~v~~~~~~iPtyp~g~---~gf~~ask~ 323 (387)
+.+.- ..+.+....--.|.--| =-|+++.+.
T Consensus 1000 L~~lG-Y~v~~~vLnA~dyGVPQ~R~Rvfivg~r~ 1033 (1330)
T 3av4_A 1000 LVRMG-YQCTFGVLQAGQYGVAQTRRRAIILAAAP 1033 (1330)
T ss_dssp HHHHT-CEEEEEEEEGGGGSCSBCCEEEEEEEECT
T ss_pred HHhcC-CeeeEEEecHHHcCCCccccEEEEEEecC
Confidence 66542 13343333333442222 367787754
No 413
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=88.85 E-value=3.3 Score=37.51 Aligned_cols=78 Identities=17% Similarity=0.080 Sum_probs=50.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
+.++||+.|++. ++++++++.. ...+|++++.+++-++...+.+... ..++.++.+|..+. ++..
T Consensus 6 ~~k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHHHH
Confidence 456888888764 4555554431 1258999999988777666655433 35788999887532 1111
Q ss_pred CCCCeeEEEEcCC
Q 016578 231 PRGKYDAIIVDSS 243 (387)
Q Consensus 231 ~~~~fDvII~D~~ 243 (387)
..++.|++|.++.
T Consensus 80 ~~g~id~lv~nAg 92 (252)
T 3h7a_A 80 AHAPLEVTIFNVG 92 (252)
T ss_dssp HHSCEEEEEECCC
T ss_pred hhCCceEEEECCC
Confidence 0157999998764
No 414
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.72 E-value=6.6 Score=36.42 Aligned_cols=107 Identities=13% Similarity=0.131 Sum_probs=61.5
Q ss_pred CCCEEEEEcCccc-HHH----HHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------Hh
Q 016578 160 SPKTVLVVGGGDG-GVL----REISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LR 228 (387)
Q Consensus 160 ~p~~VL~IG~G~G-~~~----~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~ 228 (387)
+.++||+.|+++| +++ +.+++.+ .+|++++.++...+.+++..... .++.++..|..+. ++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAG--AELAFTYQGDALKKRVEPLAEEL------GAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTT--CEEEEEECSHHHHHHHHHHHHHH------TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHhc------CCceEEECCCCCHHHHHHHHH
Confidence 4578999997644 344 4445543 58999999976655555443322 3678888887532 11
Q ss_pred hC--CCCCeeEEEEcCCCCC-----CCccccch--------------HHHHHHHHHhccCCCeEEec
Q 016578 229 QV--PRGKYDAIIVDSSDPV-----GPAQELVE--------------KPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 229 ~~--~~~~fDvII~D~~dp~-----~~~~~L~~--------------~ef~~~l~~~LkpgGvlv~q 274 (387)
.. .-++.|++|.++.-.. .+...... ..+.+.+...|+++|.++..
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 11 1247999998764321 11111111 12345666677788877753
No 415
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.69 E-value=2.4 Score=38.15 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=48.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC---CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD---SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~---~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~ 230 (387)
+.++||+.| |+|++++.++++. ...+|++++.++.-.+...+.+... ..+++++.+|..+. ++..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-----GLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-----CCeeEEEECCCCCHHHHHHHHHHH
Confidence 346777777 5566777665431 2358999999987666555544332 34788888887542 1110
Q ss_pred --CCCCeeEEEEcCC
Q 016578 231 --PRGKYDAIIVDSS 243 (387)
Q Consensus 231 --~~~~fDvII~D~~ 243 (387)
.-+..|+||..+.
T Consensus 77 ~~~~g~id~li~~Ag 91 (276)
T 1wma_A 77 RKEYGGLDVLVNNAG 91 (276)
T ss_dssp HHHHSSEEEEEECCC
T ss_pred HHhcCCCCEEEECCc
Confidence 0137999997754
No 416
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.63 E-value=5.1 Score=35.73 Aligned_cols=78 Identities=12% Similarity=0.112 Sum_probs=49.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
+.++||+.|++ |++++.++++. ...+|++++.++.-.+...+.+... ..++.++..|..+. +++.
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-----GFKARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 35678888755 55555554321 1258999999988777666655432 35788888887532 2111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
..++.|++|..+.
T Consensus 78 ~~~~~id~li~~Ag 91 (247)
T 3lyl_A 78 AENLAIDILVNNAG 91 (247)
T ss_dssp HTTCCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1347899998764
No 417
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.59 E-value=5.3 Score=40.08 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCcccHHH--HHHHhcCCCceEEEEeCCHHHHHHHHhhcc-cccCCCC--------CCCEEEEEcchhhHH
Q 016578 159 PSPKTVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDVSKKYFP-ELAVGFE--------DPRVRLHIGDAVEFL 227 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~--~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~-~~~~~~~--------d~rv~v~~gD~~~~l 227 (387)
...-++-+||.|.=+.. ..+++.+ -+|+++|+|++.++..++... ....+++ ..++++ ..|..+-+
T Consensus 6 ~~~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~ 82 (446)
T 4a7p_A 6 HGSVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV 82 (446)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH
T ss_pred CCceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH
Confidence 34568999999954443 4455553 589999999999887766311 0000000 123443 34544433
Q ss_pred hhCCCCCeeEEEEcCCCCC----CCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceE
Q 016578 228 RQVPRGKYDAIIVDSSDPV----GPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYA 303 (387)
Q Consensus 228 ~~~~~~~fDvII~D~~dp~----~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~ 303 (387)
..-|+||+..+.|. +.++--+-.+.++.+.+.|++|-+++..+.. .+...+++.+.+.+..+. ..+.
T Consensus 83 -----~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv---~pgtt~~l~~~l~e~~~~-~d~~ 153 (446)
T 4a7p_A 83 -----KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV---PVGTGDEVERIIAEVAPN-SGAK 153 (446)
T ss_dssp -----TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC---CTTHHHHHHHHHHHHSTT-SCCE
T ss_pred -----hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC---CchHHHHHHHHHHHhCCC-CCce
Confidence 24789998876653 2222223456678888899998887765432 234455666666666542 4455
Q ss_pred EEEeeccC
Q 016578 304 WASVPTYP 311 (387)
Q Consensus 304 ~~~iPtyp 311 (387)
..+-|.+-
T Consensus 154 v~~~Pe~a 161 (446)
T 4a7p_A 154 VVSNPEFL 161 (446)
T ss_dssp EEECCCCC
T ss_pred EEeCcccc
Confidence 56667653
No 418
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.58 E-value=4.5 Score=38.46 Aligned_cols=110 Identities=14% Similarity=0.242 Sum_probs=57.9
Q ss_pred CCCEEEEEcCcccHHHHH--HHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 160 SPKTVLVVGGGDGGVLRE--ISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~e--l~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
++.+|.+||+|.-+.+.. ++......+++.+|++++.++--..-+... ..+...++++..+|... + ..-|+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a-~-----~~aDv 77 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSD-C-----HDADL 77 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGG-G-----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHH-h-----CCCCE
Confidence 356999999875444332 333433468999999986554211111110 01112345555544222 2 24899
Q ss_pred EEEcCCCCCCCccc-----cchHHHHH----HHHHhccCCCeEEeccccc
Q 016578 238 IIVDSSDPVGPAQE-----LVEKPFFD----TIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 238 II~D~~dp~~~~~~-----L~~~ef~~----~l~~~LkpgGvlv~q~~s~ 278 (387)
||+-...|..+... ..+...++ .+.+. .|++++++ ..+|
T Consensus 78 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv-~tNP 125 (317)
T 3d0o_A 78 VVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLV-ATNP 125 (317)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEE-CSSS
T ss_pred EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEE-ecCc
Confidence 99877655544221 11222333 34443 89999887 3455
No 419
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.57 E-value=2.9 Score=42.01 Aligned_cols=101 Identities=21% Similarity=0.291 Sum_probs=62.3
Q ss_pred CCEEEEEcCccc--HHHHHHHhcCCCceEEEEeCCHHHHHHHHhhccc----------ccC-CCCCCCEEEEEcchhhHH
Q 016578 161 PKTVLVVGGGDG--GVLREISRHDSVELIDICEIDKMVIDVSKKYFPE----------LAV-GFEDPRVRLHIGDAVEFL 227 (387)
Q Consensus 161 p~~VL~IG~G~G--~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~----------~~~-~~~d~rv~v~~gD~~~~l 227 (387)
.++|.+||+|.- +++..+++.+ .+|+++|++++.++.+++.+.. ... ..+....++ ..|. +-+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH
Confidence 358999999963 3444455543 5899999999988877664321 000 011122333 4553 211
Q ss_pred hhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 228 RQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 228 ~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
...|+||...+.. .-...++++.+...++|+.+++.++
T Consensus 113 -----~~aDlVIeaVpe~-----~~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 113 -----STVDLVVEAVFED-----MNLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp -----TTCSEEEECCCSC-----HHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -----CCCCEEEEcCCCC-----HHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 3589999876531 1124568888999999998888654
No 420
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=88.57 E-value=0.78 Score=44.46 Aligned_cols=97 Identities=15% Similarity=0.210 Sum_probs=58.6
Q ss_pred CCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
...++||++| +|-|..+..+++..+ .+|++++ +++-.+.+++.-. +.-+.....|..+-+.+. ..+|
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~lGa-------~~v~~~~~~~~~~~~~~~--~g~D 250 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKLGA-------DDVIDYKSGSVEEQLKSL--KPFD 250 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHTTC-------SEEEETTSSCHHHHHHTS--CCBS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHcCC-------CEEEECCchHHHHHHhhc--CCCC
Confidence 4567999999 456778888888765 4888888 6666777765311 100110012333334332 4699
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+||-....+ ...++...+.|+++|.++...
T Consensus 251 ~vid~~g~~---------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 251 FILDNVGGS---------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEEESSCTT---------HHHHGGGGBCSSSCCEEEESC
T ss_pred EEEECCCCh---------hhhhHHHHHhhcCCcEEEEeC
Confidence 988543221 013456677899999998654
No 421
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.10 E-value=2 Score=41.28 Aligned_cols=107 Identities=15% Similarity=0.159 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCcccHHH--HHHHhcCCCceEEEEeCCHHHHHHHHhhccc----cc-CC-CCC--------CCEEEEEc
Q 016578 158 IPSPKTVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDVSKKYFPE----LA-VG-FED--------PRVRLHIG 221 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~--~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~----~~-~~-~~d--------~rv~v~~g 221 (387)
.|...+|-+||+|.=+.. ..++.++ .+|+.+|++++.++.+.+++.. .. .+ +.. .+++.. .
T Consensus 3 ~p~~~~VaViGaG~MG~giA~~~a~~G--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~ 79 (319)
T 3ado_A 3 SPAAGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-T 79 (319)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-C
T ss_pred CCCCCeEEEECCcHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-c
Confidence 355679999999964443 3344543 6899999999998877765432 11 11 111 123322 3
Q ss_pred chhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 222 DAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 222 D~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
|..+-+ ..-|+||=..+. +--..++.|+.+-+.++|+-+|..++.+
T Consensus 80 ~l~~a~-----~~ad~ViEav~E-----~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 80 NLAEAV-----EGVVHIQECVPE-----NLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp CHHHHT-----TTEEEEEECCCS-----CHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred chHhHh-----ccCcEEeecccc-----HHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 332222 257888844332 2223678999999999999999987754
No 422
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=87.72 E-value=4.5 Score=36.59 Aligned_cols=78 Identities=19% Similarity=0.271 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-cccH---HHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------Hhh
Q 016578 160 SPKTVLVVGG-GDGG---VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQ 229 (387)
Q Consensus 160 ~p~~VL~IG~-G~G~---~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~ 229 (387)
+.++||+.|+ |.|. +++.+++.+ .+|++++.+++-.+...+.+... ...++.++..|..+. ++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG--ADVVISDYHERRLGETRDQLADL----GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTT----CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC--CEEEEecCCHHHHHHHHHHHHhc----CCCceEEEEeCCCCHHHHHHHHHH
Confidence 4568999887 4432 334445543 68999999988777766665432 235899999997542 111
Q ss_pred C--CCCCeeEEEEcCC
Q 016578 230 V--PRGKYDAIIVDSS 243 (387)
Q Consensus 230 ~--~~~~fDvII~D~~ 243 (387)
. .-++.|++|....
T Consensus 95 ~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCcEEEECCC
Confidence 1 0136899998764
No 423
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=87.55 E-value=4.3 Score=36.76 Aligned_cols=77 Identities=17% Similarity=0.230 Sum_probs=49.5
Q ss_pred CCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC--
Q 016578 161 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV-- 230 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~-- 230 (387)
.++||+.|++ |++++.++++. ...+|++++.+++-.+...+.+... ..++.++..|..+. ++..
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-----PGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-----TTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4677877765 45655554431 1258999999998877776665432 35788899887542 1111
Q ss_pred CCCCeeEEEEcCC
Q 016578 231 PRGKYDAIIVDSS 243 (387)
Q Consensus 231 ~~~~fDvII~D~~ 243 (387)
.-++.|++|.+..
T Consensus 80 ~~g~id~lv~nAg 92 (257)
T 3imf_A 80 KFGRIDILINNAA 92 (257)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 0137899998764
No 424
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.40 E-value=7.9 Score=29.74 Aligned_cols=68 Identities=24% Similarity=0.274 Sum_probs=41.6
Q ss_pred CCEEEEEcCcccHHHHHHHh---cCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCe
Q 016578 161 PKTVLVVGGGDGGVLREISR---HDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKY 235 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k---~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~f 235 (387)
.++|+++|+ |.+++.+++ ..+..+|++++.+++-.+..+. ..++++..|..+ .+.+. -..+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~-~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKA-LGGF 70 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHH-TTTC
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHH-HcCC
Confidence 358999998 444444432 2234689999999987766541 245566666543 22222 1369
Q ss_pred eEEEEcC
Q 016578 236 DAIIVDS 242 (387)
Q Consensus 236 DvII~D~ 242 (387)
|+||...
T Consensus 71 d~vi~~~ 77 (118)
T 3ic5_A 71 DAVISAA 77 (118)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9999755
No 425
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.30 E-value=0.65 Score=44.22 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=24.2
Q ss_pred CCCEEEEEcCcc-cHHH-HHHHhcCCCceEEEEeCCH
Q 016578 160 SPKTVLVVGGGD-GGVL-REISRHDSVELIDICEIDK 194 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~~-~el~k~~~~~~Vt~VEiD~ 194 (387)
...+||+||+|. |... ..|++. ++.+++.+|-|.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 356999999873 4433 344554 588999999886
No 426
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.21 E-value=6 Score=37.54 Aligned_cols=102 Identities=19% Similarity=0.245 Sum_probs=55.6
Q ss_pred EEEEEcCcccHH--HHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 163 TVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 163 ~VL~IG~G~G~~--~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
+|.+||+|.=+. +..+++.....+|+++|++++.++.....+..... +. ...++...|. + .. ...|+||+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~-~~~~i~~~d~-~---~~--~~aDvVii 73 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FT-RRANIYAGDY-A---DL--KGSDVVIV 73 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GS-CCCEEEECCG-G---GG--TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hc-CCcEEEeCCH-H---Hh--CCCCEEEE
Confidence 789999975433 33344443334899999998877654432211100 00 1234444452 2 22 35899998
Q ss_pred cCCCCCCCcc---ccc------hHHHHHHHHHhccCCCeEEe
Q 016578 241 DSSDPVGPAQ---ELV------EKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 241 D~~dp~~~~~---~L~------~~ef~~~l~~~LkpgGvlv~ 273 (387)
-...+..+.. .+. -++.++.+.+. .|++++++
T Consensus 74 av~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~ 114 (319)
T 1a5z_A 74 AAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIV 114 (319)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEE
Confidence 7766543311 111 13455556555 58898765
No 427
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=86.95 E-value=5.7 Score=36.99 Aligned_cols=79 Identities=10% Similarity=0.134 Sum_probs=51.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..++||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-----GFDAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 45688888876 44555554431 1258999999998887776665432 35788899887542 1111
Q ss_pred -CCCCeeEEEEcCCC
Q 016578 231 -PRGKYDAIIVDSSD 244 (387)
Q Consensus 231 -~~~~fDvII~D~~d 244 (387)
.-+..|++|.++..
T Consensus 104 ~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 104 RLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHSSCSEEEECCCC
T ss_pred HhCCCCCEEEECCCc
Confidence 01379999987653
No 428
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.89 E-value=6.1 Score=36.31 Aligned_cols=78 Identities=14% Similarity=0.130 Sum_probs=48.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..+.||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-----GHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 35678888865 44555554431 1358999999988777666655432 45788999887542 1111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-++.|++|.++.
T Consensus 97 ~~~g~id~lv~nAg 110 (279)
T 3sju_A 97 ERFGPIGILVNSAG 110 (279)
T ss_dssp HHHCSCCEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 0147899998764
No 429
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=86.80 E-value=3.1 Score=39.49 Aligned_cols=93 Identities=16% Similarity=0.082 Sum_probs=58.2
Q ss_pred CCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCee
Q 016578 161 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYD 236 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~fD 236 (387)
.++|+++|+ |.+++.+++.. ... |+++|.|++.++ +++ ..+.++.+|+.+ .+++..-+..|
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-----------~~~~~i~gd~~~~~~L~~a~i~~a~ 179 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-----------SGANFVHGDPTRVSDLEKANVRGAR 179 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-----------TTCEEEESCTTSHHHHHHTCSTTEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-----------CCcEEEEeCCCCHHHHHhcChhhcc
Confidence 458999997 45666666542 124 999999999887 553 256789999864 45444345799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.+++...+. . ..-..-...+.+.|+..++...
T Consensus 180 ~vi~~~~~d---~----~n~~~~~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 180 AVIVDLESD---S----ETIHCILGIRKIDESVRIIAEA 211 (336)
T ss_dssp EEEECCSSH---H----HHHHHHHHHHTTCTTSEEEEEC
T ss_pred EEEEcCCcc---H----HHHHHHHHHHHHCCCCeEEEEE
Confidence 999765431 1 1112334455667776665544
No 430
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.79 E-value=6.2 Score=36.53 Aligned_cols=109 Identities=19% Similarity=0.245 Sum_probs=60.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHH-HHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKM-VIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~-vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~ 230 (387)
+.++||+.|++ |+++++++++. ...+|++++.++. ..+...+.+... ..++.++.+|..+. +++.
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-----GVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-----TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 35688888865 44565554431 1358999998865 344444433322 35788999887542 1111
Q ss_pred --CCCCeeEEEEcCCCC--CCCccccc--------------hHHHHHHHHHhccCCCeEEec
Q 016578 231 --PRGKYDAIIVDSSDP--VGPAQELV--------------EKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 231 --~~~~fDvII~D~~dp--~~~~~~L~--------------~~ef~~~l~~~LkpgGvlv~q 274 (387)
.-++.|++|.+.... ..+...+. .....+.+...|+.+|.++..
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 114789999875431 12111111 112345566677788877754
No 431
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.61 E-value=1.8 Score=40.32 Aligned_cols=103 Identities=18% Similarity=0.272 Sum_probs=62.6
Q ss_pred CCEEEEEcCccc--HHHHHHHhcCCCceEEEEeCCHHHHHHHHhhccccc------C-CCCC-------CCEEEEEcchh
Q 016578 161 PKTVLVVGGGDG--GVLREISRHDSVELIDICEIDKMVIDVSKKYFPELA------V-GFED-------PRVRLHIGDAV 224 (387)
Q Consensus 161 p~~VL~IG~G~G--~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~------~-~~~d-------~rv~v~~gD~~ 224 (387)
.++|.+||+|.= .++..+++.. .+|+++|.+++.++.+++.+.... . .+.. .+++. ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHG--FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 368999999853 3344445543 589999999999888876532110 0 0000 12232 34433
Q ss_pred hHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 225 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 225 ~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+.+ ...|+||...+... -...++++.+...++|+.+++.++.
T Consensus 81 ~~~-----~~aDlVi~av~~~~-----~~~~~v~~~l~~~~~~~~il~s~tS 122 (283)
T 4e12_A 81 QAV-----KDADLVIEAVPESL-----DLKRDIYTKLGELAPAKTIFATNSS 122 (283)
T ss_dssp HHT-----TTCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred HHh-----ccCCEEEEeccCcH-----HHHHHHHHHHHhhCCCCcEEEECCC
Confidence 322 35899997664321 1245688899999999998886553
No 432
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.60 E-value=4.5 Score=39.28 Aligned_cols=92 Identities=10% Similarity=0.179 Sum_probs=60.7
Q ss_pred CCEEEEEcCcccH--HHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 161 PKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 161 p~~VL~IG~G~G~--~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..+|.+||+|.=+ +++.+++.. .+|+++|.+++.++.+.+. .+. ...|..+.++.. ...|+|
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G--~~V~v~dr~~~~~~~l~~~-----------g~~-~~~s~~e~~~~a--~~~DvV 85 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG--HECVVYDLNVNAVQALERE-----------GIA-GARSIEEFCAKL--VKPRVV 85 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTT-----------TCB-CCSSHHHHHHHS--CSSCEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHC-----------CCE-EeCCHHHHHhcC--CCCCEE
Confidence 3589999998433 344555554 5899999999887766543 111 123555665543 357999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|+-.+++ ...+.++.+...|++|.+++..+
T Consensus 86 i~~vp~~-------~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 86 WLMVPAA-------VVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp EECSCGG-------GHHHHHHHHGGGCCTTCEEEECS
T ss_pred EEeCCHH-------HHHHHHHHHHhhCCCCCEEEeCC
Confidence 9876543 24567788888898888777543
No 433
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.54 E-value=0.63 Score=44.70 Aligned_cols=48 Identities=13% Similarity=0.004 Sum_probs=40.4
Q ss_pred CCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCH---HHHHHHHhhcccc
Q 016578 158 IPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDK---MVIDVSKKYFPEL 207 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~---~vi~~ar~~~~~~ 207 (387)
......|||--||+|.++.++.+.. .+.+++|+++ ..++.+++++...
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 3556799999999999999998885 6899999999 9999999998643
No 434
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.44 E-value=3.8 Score=35.66 Aligned_cols=99 Identities=14% Similarity=0.130 Sum_probs=56.0
Q ss_pred EEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 163 TVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 163 ~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
+||+.|+ +|.+++.+++.. ...+|+++..++.-.+.. . .++++++.+|..+.-... -+..|+||.
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--------~~~~~~~~~D~~d~~~~~-~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---L--------GATVATLVKEPLVLTEAD-LDSVDAVVD 68 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---T--------CTTSEEEECCGGGCCHHH-HTTCSEEEE
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc---c--------CCCceEEecccccccHhh-cccCCEEEE
Confidence 6888885 455666654431 135899999987654321 1 357899999986532111 136899997
Q ss_pred cCCCCCCCccccchHHHHHHHHHhccCC-CeEEec
Q 016578 241 DSSDPVGPAQELVEKPFFDTIAKALRPG-GVLCNM 274 (387)
Q Consensus 241 D~~dp~~~~~~L~~~ef~~~l~~~Lkpg-Gvlv~q 274 (387)
.....+.+..........+.+.++++.. +.++..
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 7654322211112233445556666543 555543
No 435
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=86.43 E-value=18 Score=38.50 Aligned_cols=44 Identities=18% Similarity=0.189 Sum_probs=35.1
Q ss_pred CEEEEEcCcccHHHHHHHhcC-----CCceEEEEeCCHHHHHHHHhhcc
Q 016578 162 KTVLVVGGGDGGVLREISRHD-----SVELIDICEIDKMVIDVSKKYFP 205 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~-----~~~~Vt~VEiD~~vi~~ar~~~~ 205 (387)
-+|+||-||.||+..-+.+.+ ..+-+.++|+|+..++.-+.++|
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 379999999999887765432 13567899999999999999875
No 436
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=86.35 E-value=2.7 Score=42.25 Aligned_cols=75 Identities=15% Similarity=0.303 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCcccHHHHHHHhc-CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCe
Q 016578 159 PSPKTVLVVGGGDGGVLREISRH-DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG~G~G~~~~el~k~-~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~f 235 (387)
...++|+++|+|. ++..+++. ....+|..+|.|++-.+...+.++ +..+++||+.+ .|.+..-+..
T Consensus 233 ~~~~~v~I~GgG~--ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~---------~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 233 KPYRRIMIVGGGN--IGASLAKRLEQTYSVKLIERNLQRAEKLSEELE---------NTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp SCCCEEEEECCSH--HHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCT---------TSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccccEEEEEcchH--HHHHHHHHhhhcCceEEEecCHHHHHHHHHHCC---------CceEEeccccchhhHhhcCchhh
Confidence 3467999999885 33333332 223589999999998888777663 67899999975 5655434579
Q ss_pred eEEEEcCCC
Q 016578 236 DAIIVDSSD 244 (387)
Q Consensus 236 DvII~D~~d 244 (387)
|+++.-..+
T Consensus 302 D~~ia~T~~ 310 (461)
T 4g65_A 302 DVFIALTNE 310 (461)
T ss_dssp SEEEECCSC
T ss_pred cEEEEcccC
Confidence 999975443
No 437
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.33 E-value=3.2 Score=39.56 Aligned_cols=108 Identities=19% Similarity=0.206 Sum_probs=51.8
Q ss_pred CCCEEEEEcCcccHHH--HHHHhcCCCceEEEEeCCHHHHHH-HHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 160 SPKTVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDV-SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~--~el~k~~~~~~Vt~VEiD~~vi~~-ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
++.+|.+||+|.=+.+ ..++......+|+.+|++++.++- +.. +.+.. .+. .++++..+|.. .. ..-|
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~d-l~~~~-~~~-~~~~i~~~~~~----a~--~~aD 76 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD-INHGL-PFM-GQMSLYAGDYS----DV--KDCD 76 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH-HTTSC-CCT-TCEEEC--CGG----GG--TTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHH-HHHhH-Hhc-CCeEEEECCHH----Hh--CCCC
Confidence 4568999998643222 223334434589999999865442 222 11110 111 35566554422 22 2589
Q ss_pred EEEEcCCCCCCCcc---cc--ch----HHHHHHHHHhccCCCeEEeccccc
Q 016578 237 AIIVDSSDPVGPAQ---EL--VE----KPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 237 vII~D~~dp~~~~~---~L--~~----~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
+||+-...|..+.. .+ .+ +++.+.+.+. .|++++++- .+|
T Consensus 77 vVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~-tNP 125 (318)
T 1y6j_A 77 VIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV-SNP 125 (318)
T ss_dssp EEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC-SSS
T ss_pred EEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe-cCc
Confidence 99987665543321 11 11 2344444444 699998873 454
No 438
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=86.31 E-value=2.5 Score=40.32 Aligned_cols=92 Identities=15% Similarity=0.229 Sum_probs=54.2
Q ss_pred CCCCCEEEEEcCccc--HHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCe
Q 016578 158 IPSPKTVLVVGGGDG--GVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKY 235 (387)
Q Consensus 158 ~~~p~~VL~IG~G~G--~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~f 235 (387)
.++.++|++||+|.= ..++.+.+..+..+|.+++.+ ..-+++++.-... .-++... |..+.++ ..
T Consensus 118 ~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~-----g~~~~~~--~~~eav~-----~a 184 (313)
T 3hdj_A 118 RPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRC-----GVPARMA--APADIAA-----QA 184 (313)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHH-----TSCEEEC--CHHHHHH-----HC
T ss_pred cCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhc-----CCeEEEe--CHHHHHh-----hC
Confidence 467889999998842 233444444467899999999 5555555432111 1133333 7666553 48
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
|+|++-.+.. .| ++. ...|+||-.++.
T Consensus 185 DIVi~aT~s~-~p---vl~-------~~~l~~G~~V~~ 211 (313)
T 3hdj_A 185 DIVVTATRST-TP---LFA-------GQALRAGAFVGA 211 (313)
T ss_dssp SEEEECCCCS-SC---SSC-------GGGCCTTCEEEE
T ss_pred CEEEEccCCC-Cc---ccC-------HHHcCCCcEEEE
Confidence 9999765542 11 222 246888766653
No 439
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=86.11 E-value=6.3 Score=34.79 Aligned_cols=72 Identities=8% Similarity=0.157 Sum_probs=45.9
Q ss_pred CEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhCCCC
Q 016578 162 KTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQVPRG 233 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~~~~ 233 (387)
++||+.|++ |++++.++++. ...+|++++.+++-++...+.+ ..++.++..|..+. ++.. .+
T Consensus 2 k~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~-~~ 71 (230)
T 3guy_A 2 SLIVITGAS-SGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL--------SNNVGYRARDLASHQEVEQLFEQL-DS 71 (230)
T ss_dssp -CEEEESTT-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC--------SSCCCEEECCTTCHHHHHHHHHSC-SS
T ss_pred CEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--------hhccCeEeecCCCHHHHHHHHHHH-hh
Confidence 357888865 55666655431 1257999999998877666654 23677777776532 2322 34
Q ss_pred CeeEEEEcCC
Q 016578 234 KYDAIIVDSS 243 (387)
Q Consensus 234 ~fDvII~D~~ 243 (387)
.+|++|....
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 6799997764
No 440
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=86.06 E-value=1.4 Score=40.59 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=23.4
Q ss_pred CCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCH
Q 016578 161 PKTVLVVGGGD-GGVLREISRHDSVELIDICEIDK 194 (387)
Q Consensus 161 p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~ 194 (387)
..+||++|+|. |......+...++.+++.+|-|.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 56999999873 44333333334688999999874
No 441
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.91 E-value=3.2 Score=39.67 Aligned_cols=103 Identities=14% Similarity=0.099 Sum_probs=63.9
Q ss_pred CCEEEEEcCcc--cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhccc----c-cCCCCC---------CCEEEEEcchh
Q 016578 161 PKTVLVVGGGD--GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPE----L-AVGFED---------PRVRLHIGDAV 224 (387)
Q Consensus 161 p~~VL~IG~G~--G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~----~-~~~~~d---------~rv~v~~gD~~ 224 (387)
.++|-+||+|. ++++..+++.+ .+|+++|++++.++.+++.+.. . ..++-+ .++++. .|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHH
Confidence 46899999995 34455566653 4899999999999888654211 1 011111 134432 3433
Q ss_pred hHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 225 EFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 225 ~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
+.+ ..-|+||...+.. .-...++|+.+...++|+-+++.++.
T Consensus 83 eav-----~~aDlVieavpe~-----~~~k~~v~~~l~~~~~~~~Ii~s~tS 124 (319)
T 2dpo_A 83 EAV-----EGVVHIQECVPEN-----LDLKRKIFAQLDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHT-----TTEEEEEECCCSC-----HHHHHHHHHHHHTTCCSSSEEEECCS
T ss_pred HHH-----hcCCEEEEeccCC-----HHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 322 3589999876431 11245688899999999988876543
No 442
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=85.88 E-value=7.7 Score=36.52 Aligned_cols=102 Identities=19% Similarity=0.225 Sum_probs=51.5
Q ss_pred EEEEEcCcccHHH--HHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEE
Q 016578 163 TVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240 (387)
Q Consensus 163 ~VL~IG~G~G~~~--~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~ 240 (387)
+|.+||+|.=+.+ ..++......+|+.+|++++.++.....+.... .+. ..+++...|. + .. ..-|+||+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~-~~~-~~~~i~~~~~-~---a~--~~aDvVIi 73 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAA-PVS-HGTRVWHGGH-S---EL--ADAQVVIL 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSC-CTT-SCCEEEEECG-G---GG--TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhh-hhc-CCeEEEECCH-H---Hh--CCCCEEEE
Confidence 7999998753333 233444334489999999986553222221110 111 2344444442 2 22 25799998
Q ss_pred cCCCCCCCc---cccc------hHHHHHHHHHhccCCCeEEe
Q 016578 241 DSSDPVGPA---QELV------EKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 241 D~~dp~~~~---~~L~------~~ef~~~l~~~LkpgGvlv~ 273 (387)
-...|..+. ..++ -++.++.+.+. .|++++++
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 764433221 1111 14455666665 69998875
No 443
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=85.87 E-value=20 Score=33.48 Aligned_cols=95 Identities=18% Similarity=0.249 Sum_probs=54.3
Q ss_pred cCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHh---cCCCceEEEEeCCHHHHHHHHhhcccccC
Q 016578 133 DGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISR---HDSVELIDICEIDKMVIDVSKKYFPELAV 209 (387)
Q Consensus 133 DG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k---~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~ 209 (387)
||.+.-.+-|-.-+.+.+..... ....++||++|+| +.++.++. ..+..+|+.++.+++-.+...+.+...
T Consensus 100 ~g~l~G~NTD~~G~~~~L~~~~~--~l~~k~vlvlGaG--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~-- 173 (281)
T 3o8q_A 100 DGEILGDNTDGEGLVQDLLAQQV--LLKGATILLIGAG--GAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY-- 173 (281)
T ss_dssp TSCEEEECCHHHHHHHHHHHTTC--CCTTCEEEEECCS--HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG--
T ss_pred CCcEEEEecHHHHHHHHHHHhCC--CccCCEEEEECch--HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc--
Confidence 56666656665445555544321 2356799999986 34444332 234569999999987655544444322
Q ss_pred CCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCC
Q 016578 210 GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSD 244 (387)
Q Consensus 210 ~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~d 244 (387)
..++...- .+. ...+|+||.-.+.
T Consensus 174 ----~~~~~~~~------~~l-~~~aDiIInaTp~ 197 (281)
T 3o8q_A 174 ----GEVKAQAF------EQL-KQSYDVIINSTSA 197 (281)
T ss_dssp ----SCEEEEEG------GGC-CSCEEEEEECSCC
T ss_pred ----CCeeEeeH------HHh-cCCCCEEEEcCcC
Confidence 13444321 122 2479999976544
No 444
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.81 E-value=12 Score=34.08 Aligned_cols=118 Identities=17% Similarity=0.231 Sum_probs=63.9
Q ss_pred HHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCC-HHHHHHHHhhcccccCCCCCCCEEEEEcch
Q 016578 147 QEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHD--SVELIDICEID-KMVIDVSKKYFPELAVGFEDPRVRLHIGDA 223 (387)
Q Consensus 147 ~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD-~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~ 223 (387)
+.|+..+.+ ..++||+.|++. ++++++++.. ...+|++++.+ .+-.+...+.+... ..++.++.+|.
T Consensus 21 ~~mm~~~~l----~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~Dv 90 (271)
T 3v2g_A 21 QSMMTSISL----AGKTAFVTGGSR-GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-----GGRAVAIRADN 90 (271)
T ss_dssp HHHHTTTCC----TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCT
T ss_pred hhhccccCC----CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCcEEEEECCC
Confidence 556554332 457888888764 4555554431 12578888654 44444444444332 35788888887
Q ss_pred hhH------HhhC--CCCCeeEEEEcCCCCC-CCccccc--------------hHHHHHHHHHhccCCCeEEec
Q 016578 224 VEF------LRQV--PRGKYDAIIVDSSDPV-GPAQELV--------------EKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 224 ~~~------l~~~--~~~~fDvII~D~~dp~-~~~~~L~--------------~~ef~~~l~~~LkpgGvlv~q 274 (387)
.+. +++. .-++.|++|.++.... .+..... .....+.+...|+++|.++..
T Consensus 91 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 91 RDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 542 2111 0137899998764321 1111111 112345666777888877754
No 445
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=85.76 E-value=2.7 Score=39.57 Aligned_cols=91 Identities=14% Similarity=0.099 Sum_probs=57.2
Q ss_pred CCCCEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh-HHhhCCCCCe
Q 016578 159 PSPKTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVPRGKY 235 (387)
Q Consensus 159 ~~p~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~-~l~~~~~~~f 235 (387)
...++||++| +|-|..+..+++..+. +|+++.. ++-.+.+++.-. + .++..+-.+ +... -..+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~-~~~~~~~~~lGa-------~---~~i~~~~~~~~~~~--~~g~ 216 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTAS-KRNHAFLKALGA-------E---QCINYHEEDFLLAI--STPV 216 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEEC-HHHHHHHHHHTC-------S---EEEETTTSCHHHHC--CSCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEec-cchHHHHHHcCC-------C---EEEeCCCcchhhhh--ccCC
Confidence 5567999997 4568888888888654 7888874 444777776421 1 122211112 2222 2469
Q ss_pred eEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEec
Q 016578 236 DAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNM 274 (387)
Q Consensus 236 DvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q 274 (387)
|+||-... . +.++.+.++|+++|.++..
T Consensus 217 D~v~d~~g----------~-~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVG----------G-DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSC----------H-HHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCC----------c-HHHHHHHHhccCCCEEEEe
Confidence 98874322 1 2347888999999999864
No 446
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=85.73 E-value=1.8 Score=39.81 Aligned_cols=79 Identities=16% Similarity=0.203 Sum_probs=49.7
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH---Hhh----C
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF---LRQ----V 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~---l~~----~ 230 (387)
..++||+.|++ |++++++++.. ...+|++++.++.-.+.+.+.+... ...++.++..|..+. ++. .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS----NHENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----TCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEccCCCcHHHHHHHHHHH
Confidence 45678877765 55665554431 1358999999988776665555432 235799999887553 111 1
Q ss_pred --CCCCeeEEEEcCC
Q 016578 231 --PRGKYDAIIVDSS 243 (387)
Q Consensus 231 --~~~~fDvII~D~~ 243 (387)
.-++.|++|.++.
T Consensus 86 ~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 86 KTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHhCCCCCEEEECCc
Confidence 0147999998764
No 447
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=85.71 E-value=8.6 Score=38.06 Aligned_cols=45 Identities=11% Similarity=-0.003 Sum_probs=35.9
Q ss_pred CEEEEEcCcccHHHHHHHhcCC-Cce----EEEEeCCHHHHHHHHhhccc
Q 016578 162 KTVLVVGGGDGGVLREISRHDS-VEL----IDICEIDKMVIDVSKKYFPE 206 (387)
Q Consensus 162 ~~VL~IG~G~G~~~~el~k~~~-~~~----Vt~VEiD~~vi~~ar~~~~~ 206 (387)
-+||++-+|.|+....+.+.+. .+- |.+||+|+..++.-+.+++.
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 3899999999998888766431 123 88899999999999988864
No 448
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.71 E-value=5.7 Score=36.39 Aligned_cols=90 Identities=16% Similarity=0.155 Sum_probs=54.6
Q ss_pred CEEEEEcCccc--HHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCC-CeeEE
Q 016578 162 KTVLVVGGGDG--GVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRG-KYDAI 238 (387)
Q Consensus 162 ~~VL~IG~G~G--~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~-~fDvI 238 (387)
++|.+||+|.= .++..+.+.+...+|+++|.+++.++.+++. +..+ . ...|..+.+ . ..|+|
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~------g~~~---~-~~~~~~~~~-----~~~aDvV 66 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL------GIID---E-GTTSIAKVE-----DFSPDFV 66 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT------TSCS---E-EESCGGGGG-----GTCCSEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC------CCcc---c-ccCCHHHHh-----cCCCCEE
Confidence 47999998852 3334444443223799999999888776643 1111 1 123432322 2 58999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
|+..+.. ...+.++.+...|+++.+++.
T Consensus 67 ilavp~~-------~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 67 MLSSPVR-------TFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp EECSCHH-------HHHHHHHHHHHHSCTTCEEEE
T ss_pred EEcCCHH-------HHHHHHHHHHhhCCCCcEEEE
Confidence 9865421 134677788888998887664
No 449
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.45 E-value=11 Score=34.15 Aligned_cols=78 Identities=19% Similarity=0.164 Sum_probs=47.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCC------------HHHHHHHHhhcccccCCCCCCCEEEEEcchhh
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEID------------KMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE 225 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD------------~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~ 225 (387)
..++||+.|++. ++++++++.. ...+|++++.+ .+-++.+.+.+... ..++.++..|..+
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-----TSCEEEEECCTTC
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-----CCceEEEEccCCC
Confidence 456888888664 4555554431 12689999987 55555554444332 4578899988754
Q ss_pred H------HhhC--CCCCeeEEEEcCC
Q 016578 226 F------LRQV--PRGKYDAIIVDSS 243 (387)
Q Consensus 226 ~------l~~~--~~~~fDvII~D~~ 243 (387)
. +++. .-++.|++|.++.
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 2 1111 0137999998754
No 450
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=85.29 E-value=5.7 Score=35.98 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=50.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..++||+.|++ |+++++++++. ...+|++++.+++-.+...+.+... ..++.++..|..+. +...
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHH
Confidence 34678887755 55666655431 2358999999998877766665433 35788898887532 1111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-++.|++|..+.
T Consensus 102 ~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 102 AAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 0146999998764
No 451
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=85.27 E-value=7 Score=36.91 Aligned_cols=72 Identities=18% Similarity=0.324 Sum_probs=41.8
Q ss_pred CCCEEEEEcCcccH--HHHHHH-hcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 160 SPKTVLVVGGGDGG--VLREIS-RHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 160 ~p~~VL~IG~G~G~--~~~el~-k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
++.+|.+||+|.-+ .+..+. +.+..+-+.++|.+++-.+...+.+. .+ ....|..+.+. +...|
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g-------~~---~~~~~~~~~l~---~~~~D 73 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELG-------VE---TTYTNYKDMID---TENID 73 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTC-------CS---EEESCHHHHHT---TSCCS
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhC-------CC---cccCCHHHHhc---CCCCC
Confidence 44599999998533 233344 34433334567999987765444332 11 23456666553 23689
Q ss_pred EEEEcCCC
Q 016578 237 AIIVDSSD 244 (387)
Q Consensus 237 vII~D~~d 244 (387)
+|++..+.
T Consensus 74 ~V~i~tp~ 81 (346)
T 3cea_A 74 AIFIVAPT 81 (346)
T ss_dssp EEEECSCG
T ss_pred EEEEeCCh
Confidence 99876553
No 452
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=85.06 E-value=8 Score=34.81 Aligned_cols=79 Identities=13% Similarity=0.170 Sum_probs=48.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcch--hh------HHhh
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA--VE------FLRQ 229 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~--~~------~l~~ 229 (387)
+.+.||+.|++ |++++.+++.. ...+|++++.+++-.+...+.+.... ..++.++..|. .+ .++.
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET----GRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc----CCCceEEEEecccCCHHHHHHHHHH
Confidence 35678888865 45555554431 13589999999887776665554321 23677788887 21 1111
Q ss_pred C--CCCCeeEEEEcCC
Q 016578 230 V--PRGKYDAIIVDSS 243 (387)
Q Consensus 230 ~--~~~~fDvII~D~~ 243 (387)
. .-++.|++|.++.
T Consensus 86 ~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHCSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1 1247999998764
No 453
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=84.88 E-value=9.3 Score=38.24 Aligned_cols=108 Identities=10% Similarity=0.139 Sum_probs=60.4
Q ss_pred CEEEEEcCcccH--HHHHHHhcCCCceEEEEeCCHHHHHHHHhhc-ccccCCC-------CCCCEEEEEcchhhHHhhCC
Q 016578 162 KTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYF-PELAVGF-------EDPRVRLHIGDAVEFLRQVP 231 (387)
Q Consensus 162 ~~VL~IG~G~G~--~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~-~~~~~~~-------~d~rv~v~~gD~~~~l~~~~ 231 (387)
.+|.+||+|.=+ ++..+++.....+|+++|++++.++..++.- +....++ ...++++ ..|..+-++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~--- 81 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIK--- 81 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHh---
Confidence 489999998543 3445566532358999999999887764421 0000000 0013332 234333332
Q ss_pred CCCeeEEEEcCCCCCCCc--------cccchHHHHHHHHHhccCCCeEEecc
Q 016578 232 RGKYDAIIVDSSDPVGPA--------QELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 232 ~~~fDvII~D~~dp~~~~--------~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
..|+||+..+.|.... +--+..+..+.+...|+++.+++..+
T Consensus 82 --~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 131 (467)
T 2q3e_A 82 --EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKS 131 (467)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECS
T ss_pred --cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECC
Confidence 4799998876654321 11112456677888888877776533
No 454
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=84.80 E-value=7.5 Score=30.23 Aligned_cols=77 Identities=17% Similarity=0.158 Sum_probs=49.0
Q ss_pred CceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHH
Q 016578 184 VELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAK 263 (387)
Q Consensus 184 ~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~ 263 (387)
..+|..||-|+...+..++.+... +-.+ ....|+.+.+.......+|+||+|...+... ..++++.+++
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~-----g~~v-~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~-----g~~~~~~l~~ 75 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSL-----GATT-VLAADGVDALELLGGFTPDLMICDIAMPRMN-----GLKLLEHIRN 75 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHT-----TCEE-EEESCHHHHHHHHTTCCCSEEEECCC----------CHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhC-----CceE-EEeCCHHHHHHHHhcCCCCEEEEecCCCCCC-----HHHHHHHHHh
Confidence 458999999999999888887654 1123 3456776666544456799999998654322 2357777776
Q ss_pred hccCCCeEE
Q 016578 264 ALRPGGVLC 272 (387)
Q Consensus 264 ~LkpgGvlv 272 (387)
. .+...++
T Consensus 76 ~-~~~~~ii 83 (130)
T 3eod_A 76 R-GDQTPVL 83 (130)
T ss_dssp T-TCCCCEE
T ss_pred c-CCCCCEE
Confidence 4 3444443
No 455
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.77 E-value=3.4 Score=38.56 Aligned_cols=102 Identities=18% Similarity=0.243 Sum_probs=61.1
Q ss_pred CCEEEEEcCcccH--HHHHHHhcCCCceEEEEeCCHHHHHHHHhhccc----c-cCC-CCC------------CCEEEEE
Q 016578 161 PKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPE----L-AVG-FED------------PRVRLHI 220 (387)
Q Consensus 161 p~~VL~IG~G~G~--~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~----~-~~~-~~d------------~rv~v~~ 220 (387)
-++|.+||+|.-+ ++..+++.. .+|+++|++++.++.+++.+.. . ..+ +.+ .++++ .
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G--~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG--HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 3589999998633 455566653 5899999999988876553321 0 011 111 13443 2
Q ss_pred cchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 221 GDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 221 gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.|..+-+ ...|+||...+... -...++++.+...++++.+++.++
T Consensus 92 ~~~~~~~-----~~aD~Vi~avp~~~-----~~~~~v~~~l~~~~~~~~iv~s~t 136 (302)
T 1f0y_A 92 TDAASVV-----HSTDLVVEAIVENL-----KVKNELFKRLDKFAAEHTIFASNT 136 (302)
T ss_dssp SCHHHHT-----TSCSEEEECCCSCH-----HHHHHHHHHHTTTSCTTCEEEECC
T ss_pred cCHHHhh-----cCCCEEEEcCcCcH-----HHHHHHHHHHHhhCCCCeEEEECC
Confidence 3433222 35899998664311 113467888888888888877544
No 456
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.68 E-value=12 Score=33.81 Aligned_cols=77 Identities=14% Similarity=0.147 Sum_probs=49.6
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
+.+.||+.|++.| +++.+++.. ...+|++++.+++-++...+.+... ..++.++..|..+. +++.
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-----GRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 4568888887654 555444321 1258999999988777766655433 35788898887542 1111
Q ss_pred -CCCCeeEEEEcC
Q 016578 231 -PRGKYDAIIVDS 242 (387)
Q Consensus 231 -~~~~fDvII~D~ 242 (387)
.-++.|++|.+.
T Consensus 84 ~~~g~id~lv~nA 96 (264)
T 3ucx_A 84 KAYGRVDVVINNA 96 (264)
T ss_dssp HHTSCCSEEEECC
T ss_pred HHcCCCcEEEECC
Confidence 124799999876
No 457
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.67 E-value=5.7 Score=36.57 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=49.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..++||+.|++ |++++.+++.. ...+|++++.+++-.+...+.+... ..++.++..|..+. +++.
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-----GGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 45688888866 45555554431 1358999999987776666655432 35788888887532 2111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-++.|++|.++.
T Consensus 105 ~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 105 GELGGIDIAVCNAG 118 (276)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0137999998764
No 458
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=84.60 E-value=8.2 Score=36.73 Aligned_cols=109 Identities=16% Similarity=0.251 Sum_probs=55.2
Q ss_pred CCEEEEEcCcccHHHH--HHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 161 PKTVLVVGGGDGGVLR--EISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~--el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..+|.+||+|.=+.+. .++...-..+++.+|++++.++--..-+.+.. .+. .++++..++-.. . ..-|+|
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~-~~~~v~~~~~~a----~--~~aDvV 76 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ-AFT-APKKIYSGEYSD----C--KDADLV 76 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG-GGS-CCCEEEECCGGG----G--TTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH-Hhc-CCeEEEECCHHH----h--CCCCEE
Confidence 4689999986433222 23333335689999999876653222121111 111 355666544222 2 247899
Q ss_pred EEcCCCCCCCcc---cc--chHHHHHHHHHh---ccCCCeEEeccccc
Q 016578 239 IVDSSDPVGPAQ---EL--VEKPFFDTIAKA---LRPGGVLCNMAESM 278 (387)
Q Consensus 239 I~D~~dp~~~~~---~L--~~~ef~~~l~~~---LkpgGvlv~q~~s~ 278 (387)
|+-...|..+.. .+ .+...++.+.+. ..|+|++++- .||
T Consensus 77 ii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNP 123 (318)
T 1ez4_A 77 VITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA-ANP 123 (318)
T ss_dssp EECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC-SSS
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe-CCc
Confidence 987655443311 22 122344433332 2799998874 454
No 459
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=84.49 E-value=2.4 Score=43.03 Aligned_cols=103 Identities=21% Similarity=0.270 Sum_probs=64.0
Q ss_pred CCEEEEEcCcc--cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhccccc-----CC-CCC-------CCEEEEEcchhh
Q 016578 161 PKTVLVVGGGD--GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELA-----VG-FED-------PRVRLHIGDAVE 225 (387)
Q Consensus 161 p~~VL~IG~G~--G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~-----~~-~~d-------~rv~v~~gD~~~ 225 (387)
.++|-+||+|. ++++..+++.+ .+|+++|++++.++.+++.+...- .+ +.. .+++.. .|..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~- 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG--HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIH- 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGG-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHH-
Confidence 35799999985 34555566654 489999999999998876532110 01 000 134432 3321
Q ss_pred HHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578 226 FLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277 (387)
Q Consensus 226 ~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s 277 (387)
-+ ..-|+||...+.. .-...++|+.+...++|+.++++++.+
T Consensus 81 ~~-----~~aDlVIeAVpe~-----~~vk~~v~~~l~~~~~~~~IlasntSt 122 (483)
T 3mog_A 81 AL-----AAADLVIEAASER-----LEVKKALFAQLAEVCPPQTLLTTNTSS 122 (483)
T ss_dssp GG-----GGCSEEEECCCCC-----HHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred Hh-----cCCCEEEEcCCCc-----HHHHHHHHHHHHHhhccCcEEEecCCC
Confidence 12 2579999766431 112456888999999999998765543
No 460
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=84.44 E-value=4.9 Score=38.66 Aligned_cols=107 Identities=15% Similarity=0.172 Sum_probs=62.4
Q ss_pred CCEEEEEcCcccHHHHHHHhcCCCceEEEEeCC-HHHHHHHHhhcccccC-----C------------CCCCCEEEEEcc
Q 016578 161 PKTVLVVGGGDGGVLREISRHDSVELIDICEID-KMVIDVSKKYFPELAV-----G------------FEDPRVRLHIGD 222 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD-~~vi~~ar~~~~~~~~-----~------------~~d~rv~v~~gD 222 (387)
...|+.||||-......+....+ .++.+|+| |++++.-++.++.... + +..++.+++-.|
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~--~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFP--HLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCT--TEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CcEEEEeCCCCccHHHHhcCcCC--CCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 46899999999999988876532 56677777 9999988887654310 0 012567777777
Q ss_pred hhh--HH----hhCC-CCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEE
Q 016578 223 AVE--FL----RQVP-RGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLC 272 (387)
Q Consensus 223 ~~~--~l----~~~~-~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv 272 (387)
.++ ++ .... .+...++|.......-+.+. ...+++.+.+.. |+|.++
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~--~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNE--SQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHH--HHHHHHHHHHHC-SSEEEE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHH--HHHHHHHHHhhC-CCcEEE
Confidence 764 32 2221 13455566544332222111 234555565555 556554
No 461
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=84.43 E-value=5.9 Score=32.45 Aligned_cols=84 Identities=20% Similarity=0.336 Sum_probs=48.8
Q ss_pred CCEEEEEcCcccHHHHHHHhc---CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEE-EEcchhhHHhhCCCCCee
Q 016578 161 PKTVLVVGGGDGGVLREISRH---DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRL-HIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~---~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v-~~gD~~~~l~~~~~~~fD 236 (387)
.++|++||+| .+++.+++. .+. +|++++.+++-.+...+.+. +.+ ...|..+.+. ..|
T Consensus 21 ~~~v~iiG~G--~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~----------~~~~~~~~~~~~~~-----~~D 82 (144)
T 3oj0_A 21 GNKILLVGNG--MLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYE----------YEYVLINDIDSLIK-----NND 82 (144)
T ss_dssp CCEEEEECCS--HHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHT----------CEEEECSCHHHHHH-----TCS
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhC----------CceEeecCHHHHhc-----CCC
Confidence 6799999974 566655543 334 49999999887654333322 122 2234444332 489
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEe
Q 016578 237 AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 237 vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~ 273 (387)
+||.-.+.+.. +.. ...|++|++++-
T Consensus 83 ivi~at~~~~~----~~~-------~~~l~~g~~vid 108 (144)
T 3oj0_A 83 VIITATSSKTP----IVE-------ERSLMPGKLFID 108 (144)
T ss_dssp EEEECSCCSSC----SBC-------GGGCCTTCEEEE
T ss_pred EEEEeCCCCCc----Eee-------HHHcCCCCEEEE
Confidence 99976654321 111 146778777663
No 462
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=84.43 E-value=10 Score=36.33 Aligned_cols=110 Identities=18% Similarity=0.255 Sum_probs=56.9
Q ss_pred CCCCEEEEEcCcc-cH-HHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 159 PSPKTVLVVGGGD-GG-VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~-~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
.++.+|.+||+|. |. ++..++..+-..+++.+|++++.++--..-+.+.. .+. .++++..+|... . ...|
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~~-~~~~i~~~~~~a----~--~~aD 78 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PFT-SPKKIYSAEYSD----A--KDAD 78 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGGG----G--TTCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hhc-CCcEEEECcHHH----h--cCCC
Confidence 4567999999864 22 22233444434589999999876653322222211 011 356666665332 2 2589
Q ss_pred EEEEcCCCCCCC---ccccch------HHHHHHHHHhccCCCeEEeccccc
Q 016578 237 AIIVDSSDPVGP---AQELVE------KPFFDTIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 237 vII~D~~dp~~~---~~~L~~------~ef~~~l~~~LkpgGvlv~q~~s~ 278 (387)
+||+-...|..| -..|+. +++.+.+.+ ..|++++++.+ ||
T Consensus 79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvvt-NP 127 (326)
T 3vku_A 79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAA-NP 127 (326)
T ss_dssp EEEECCCCC----------------CHHHHHHHHHT-TTCCSEEEECS-SS
T ss_pred EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEcc-Cc
Confidence 999876554433 122332 233344444 46899877643 44
No 463
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=84.37 E-value=9.4 Score=33.62 Aligned_cols=78 Identities=13% Similarity=0.146 Sum_probs=48.7
Q ss_pred CCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH--HhhCC-----
Q 016578 161 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF--LRQVP----- 231 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~--l~~~~----- 231 (387)
.++||+.|++ |+++++++++. ...+|++++.+++-.+...+.+... ...++.++..|..+. ++..-
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE----QGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----HCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----cCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 3578888865 55666655431 1257999999988776665554321 135788999887543 11111
Q ss_pred -CCCeeEEEEcCC
Q 016578 232 -RGKYDAIIVDSS 243 (387)
Q Consensus 232 -~~~fDvII~D~~ 243 (387)
-++.|++|....
T Consensus 77 ~~g~id~li~~Ag 89 (235)
T 3l77_A 77 RFGDVDVVVANAG 89 (235)
T ss_dssp HHSSCSEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 137899998754
No 464
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=84.36 E-value=10 Score=35.71 Aligned_cols=67 Identities=9% Similarity=0.137 Sum_probs=42.1
Q ss_pred CEEEEEcCcccH--HHHHHHhcCCCceEE-EEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 162 KTVLVVGGGDGG--VLREISRHDSVELID-ICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 162 ~~VL~IG~G~G~--~~~el~k~~~~~~Vt-~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+|.+||+|.-+ .+..+.+++. .+++ ++|.+++..+...+.+. +. ..|..+.+.+ ...|+|
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~-~~l~av~d~~~~~~~~~~~~~~----------~~--~~~~~~~l~~---~~~D~V 67 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNAD-ARLVAVADAFPAAAEAIAGAYG----------CE--VRTIDAIEAA---ADIDAV 67 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTT-EEEEEEECSSHHHHHHHHHHTT----------CE--ECCHHHHHHC---TTCCEE
T ss_pred eEEEEECCCHHHHHHHHHHhhCCC-cEEEEEECCCHHHHHHHHHHhC----------CC--cCCHHHHhcC---CCCCEE
Confidence 489999998532 3334445543 4555 68999987665544431 22 5677776653 358999
Q ss_pred EEcCCC
Q 016578 239 IVDSSD 244 (387)
Q Consensus 239 I~D~~d 244 (387)
++-.++
T Consensus 68 ~i~tp~ 73 (331)
T 4hkt_A 68 VICTPT 73 (331)
T ss_dssp EECSCG
T ss_pred EEeCCc
Confidence 986654
No 465
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=84.30 E-value=11 Score=35.54 Aligned_cols=105 Identities=16% Similarity=0.242 Sum_probs=56.0
Q ss_pred EEEEEcCcccHHH--HHHHhcCCCceEEEEeCCHHHHHH-HHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEE
Q 016578 163 TVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDV-SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239 (387)
Q Consensus 163 ~VL~IG~G~G~~~--~el~k~~~~~~Vt~VEiD~~vi~~-ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII 239 (387)
+|.+||+|.=+.+ ..++......+++.+|++++.++- +... .+.. .+. .++++..+|-.. . ..-|+||
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl-~~~~-~~~-~~~~v~~~~~~a----~--~~aD~Vi 72 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDI-LHAT-PFA-HPVWVWAGSYGD----L--EGARAVV 72 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH-HTTG-GGS-CCCEEEECCGGG----G--TTEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHH-HHhH-hhc-CCeEEEECCHHH----h--CCCCEEE
Confidence 7899998643322 223334445689999999876653 2222 1110 111 345555555222 2 2589999
Q ss_pred EcCCCCCCCcc---cc--chHHHHH----HHHHhccCCCeEEeccccc
Q 016578 240 VDSSDPVGPAQ---EL--VEKPFFD----TIAKALRPGGVLCNMAESM 278 (387)
Q Consensus 240 ~D~~dp~~~~~---~L--~~~ef~~----~l~~~LkpgGvlv~q~~s~ 278 (387)
+-...|..+.. .+ .+...++ .+.+. .|+|++++- .||
T Consensus 73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~-tNP 118 (310)
T 2xxj_A 73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVA-TNP 118 (310)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC-SSS
T ss_pred ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEe-cCc
Confidence 87655544321 11 1222333 33333 799998874 444
No 466
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=84.24 E-value=15 Score=32.99 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=47.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
+.++||+.|++ |++++++++.. ...+|++++.+++-.+...+.+ ..++.++.+|..+. +++.
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 45688888865 45555554431 1258999999988766555443 24678888887532 1111
Q ss_pred -CCCCeeEEEEcCCC
Q 016578 231 -PRGKYDAIIVDSSD 244 (387)
Q Consensus 231 -~~~~fDvII~D~~d 244 (387)
.-++.|++|....-
T Consensus 78 ~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 78 EHAGGLDILVNNAAL 92 (259)
T ss_dssp HHSSSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 12479999987643
No 467
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=84.23 E-value=6.5 Score=35.49 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=48.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------Hhh--
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQ-- 229 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~-- 229 (387)
..++||+.|++ |++++.+++.. ...+|++++.+++-.+...+.+... ..++.++.+|..+. ++.
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-----GFKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 35678888865 55666554431 1258999999987766554444322 34788888887542 111
Q ss_pred -CCCCCeeEEEEcCC
Q 016578 230 -VPRGKYDAIIVDSS 243 (387)
Q Consensus 230 -~~~~~fDvII~D~~ 243 (387)
.-.++.|++|....
T Consensus 82 ~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 82 NHFHGKLNILVNNAG 96 (260)
T ss_dssp HHTTTCCCEEEECCC
T ss_pred HHcCCCCCEEEECCC
Confidence 10157999998764
No 468
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.22 E-value=13 Score=33.71 Aligned_cols=78 Identities=17% Similarity=0.244 Sum_probs=49.2
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..++||+.|++ |++++++++.. ...+|++++.++.-.+...+.+... ..++.++.+|..+. ++..
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-----GAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-----CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 35688888855 55666665431 1358999999987766555544332 34788898887532 1111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-+..|+||..+.
T Consensus 104 ~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 104 AEIGDVSILVNNAG 117 (272)
T ss_dssp HHTCCCSEEEECCC
T ss_pred HHCCCCcEEEECCC
Confidence 1246999998764
No 469
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=83.75 E-value=4.9 Score=35.07 Aligned_cols=67 Identities=19% Similarity=0.085 Sum_probs=44.5
Q ss_pred EEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh---HHhhCCCCCeeE
Q 016578 163 TVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE---FLRQVPRGKYDA 237 (387)
Q Consensus 163 ~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~---~l~~~~~~~fDv 237 (387)
+||+.| |+|.+++.+++.. ...+|++++.++.- ... .++++++.+|..+ .+.+. -+..|+
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~~~------~~~~~~~~~D~~d~~~~~~~~-~~~~d~ 66 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQ-------VPQ------YNNVKAVHFDVDWTPEEMAKQ-LHGMDA 66 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGG-------SCC------CTTEEEEECCTTSCHHHHHTT-TTTCSE
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccc-------hhh------cCCceEEEecccCCHHHHHHH-HcCCCE
Confidence 689888 4567777776541 23589999987642 111 1589999999876 34333 246999
Q ss_pred EEEcCCC
Q 016578 238 IIVDSSD 244 (387)
Q Consensus 238 II~D~~d 244 (387)
||..+..
T Consensus 67 vi~~ag~ 73 (219)
T 3dqp_A 67 IINVSGS 73 (219)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9976643
No 470
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=83.64 E-value=14 Score=34.71 Aligned_cols=81 Identities=20% Similarity=0.166 Sum_probs=50.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..++||+.|++ |++++++++.. ...+|++++.+++-.+...+.+.... .+.++.++..|..+. +...
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 45688998876 44555554431 12589999999987776666554321 123788999887542 1111
Q ss_pred -CCCCeeEEEEcCCC
Q 016578 231 -PRGKYDAIIVDSSD 244 (387)
Q Consensus 231 -~~~~fDvII~D~~d 244 (387)
.-+..|++|.++..
T Consensus 83 ~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 83 ARFGPVSILCNNAGV 97 (319)
T ss_dssp HHTCCEEEEEECCCC
T ss_pred HhCCCCCEEEECCCc
Confidence 12478999987653
No 471
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=83.62 E-value=16 Score=34.11 Aligned_cols=101 Identities=20% Similarity=0.298 Sum_probs=52.6
Q ss_pred CCCEEEEEcCcccHH--HHHHHhcCCCceEEEEeCCHHHHHH-HH---hhcccccCCCCCCCEEEEEc-chhhHHhhCCC
Q 016578 160 SPKTVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDV-SK---KYFPELAVGFEDPRVRLHIG-DAVEFLRQVPR 232 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~--~~el~k~~~~~~Vt~VEiD~~vi~~-ar---~~~~~~~~~~~d~rv~v~~g-D~~~~l~~~~~ 232 (387)
++.+|.+||+|.=+. +..+++.....+|+.+|++++.++. +. +.++ . . ...++... |. + ..
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~-~----~-~~~~v~~~~~~-~---~~-- 73 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS-F----Y-PTVSIDGSDDP-E---IC-- 73 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG-G----S-TTCEEEEESCG-G---GG--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhh-h----c-CCeEEEeCCCH-H---Hh--
Confidence 346899999975332 2334444323489999999876551 11 1121 1 1 13344433 42 1 11
Q ss_pred CCeeEEEEcCCCCCCCcc---cc------chHHHHHHHHHhccCCCeEEe
Q 016578 233 GKYDAIIVDSSDPVGPAQ---EL------VEKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 233 ~~fDvII~D~~dp~~~~~---~L------~~~ef~~~l~~~LkpgGvlv~ 273 (387)
...|+||+-...+..+.. .+ .-.+..+.+.+. .|+++++.
T Consensus 74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~ 122 (319)
T 1lld_A 74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 122 (319)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 358999987644332211 01 011455666653 78887764
No 472
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.55 E-value=3.7 Score=41.28 Aligned_cols=70 Identities=16% Similarity=0.238 Sum_probs=49.6
Q ss_pred CCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh--HHhhCCCCCee
Q 016578 161 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE--FLRQVPRGKYD 236 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~--~l~~~~~~~fD 236 (387)
..+|+++|+| .++..+++.. ....|+++|.|++.++.+++.+ .+.++.||+.+ .|++..-+..|
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------~~~~i~Gd~~~~~~L~~Agi~~ad 70 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------DLRVVNGHASHPDVLHEAGAQDAD 70 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------SCEEEESCTTCHHHHHHHTTTTCS
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------CcEEEEEcCCCHHHHHhcCCCcCC
Confidence 4589999887 4555555542 2358999999999998877654 35788999964 45554446799
Q ss_pred EEEEcC
Q 016578 237 AIIVDS 242 (387)
Q Consensus 237 vII~D~ 242 (387)
++|.-.
T Consensus 71 ~~ia~t 76 (461)
T 4g65_A 71 MLVAVT 76 (461)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 888643
No 473
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=83.48 E-value=14 Score=33.61 Aligned_cols=77 Identities=18% Similarity=0.206 Sum_probs=47.5
Q ss_pred CCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC--
Q 016578 161 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV-- 230 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~-- 230 (387)
.++||+.|++ |++++.+++.. ...+|++++.+++-.+...+.+... ..++.++.+|..+. ++..
T Consensus 22 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 22 SEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-----GVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp SCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 4678888765 55666655431 1258999999987666554444322 34688888887432 1110
Q ss_pred CCCCeeEEEEcCC
Q 016578 231 PRGKYDAIIVDSS 243 (387)
Q Consensus 231 ~~~~fDvII~D~~ 243 (387)
.-+..|++|..+.
T Consensus 96 ~~g~iD~lv~~Ag 108 (277)
T 2rhc_B 96 RYGPVDVLVNNAG 108 (277)
T ss_dssp HTCSCSEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1247999998764
No 474
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=83.47 E-value=3.9 Score=39.00 Aligned_cols=112 Identities=11% Similarity=0.071 Sum_probs=68.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh-HHhhCCCCCee--
Q 016578 160 SPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE-FLRQVPRGKYD-- 236 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~-~l~~~~~~~fD-- 236 (387)
.++.|++||||-=..+..+.. +...++.-|| .|++++..++.+.... .....+.+++..|.++ ++.......||
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~-~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHG-VTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTT-CCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcC-CCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 356899999997777655542 2235667677 5999999999886431 1234678899999874 32221111232
Q ss_pred ---EEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEeccc
Q 016578 237 ---AIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276 (387)
Q Consensus 237 ---vII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~ 276 (387)
++++..-...-+.+ -...+++.+.+.+.||+.++....
T Consensus 179 ~Pt~~i~Egvl~Yl~~~--~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPAT--AQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp SCEEEEECSCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCEEEEEechHhhCCHH--HHHHHHHHHHHhCCCCeEEEEEec
Confidence 34433322222221 134678888888889998886543
No 475
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.46 E-value=8.4 Score=34.92 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=49.8
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..++||+.|++ |++++++++.. ...+|++++.+++-.+...+.+... ...++.++..|..+. ++..
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL----GSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----SSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45677777755 55666655431 1258999999988777666655432 125788999987542 1111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-++.|++|.+..
T Consensus 84 ~~~g~id~lvnnAg 97 (262)
T 3pk0_A 84 EEFGGIDVVCANAG 97 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 0137999998754
No 476
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=83.44 E-value=1.2 Score=42.80 Aligned_cols=94 Identities=10% Similarity=0.071 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCc-ccHHHHHHHhcC-CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEc-c-hhhHHhhCC-CC
Q 016578 159 PSPKTVLVVGGG-DGGVLREISRHD-SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG-D-AVEFLRQVP-RG 233 (387)
Q Consensus 159 ~~p~~VL~IG~G-~G~~~~el~k~~-~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~g-D-~~~~l~~~~-~~ 233 (387)
...++||++|+| .|..+..+++.. + .+|++++.+++-.+.+++.=. + .++.- + ..+.+++.. ..
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~v~~~~~g~ 253 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTP-ATVIALDVKEEKLKLAERLGA-------D---HVVDARRDPVKQVMELTRGR 253 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESSHHHHHHHHHTTC-------S---EEEETTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHhCC-------C---EEEeccchHHHHHHHHhCCC
Confidence 456799999964 455666677765 4 489999999999998886421 1 11111 1 122333322 23
Q ss_pred CeeEEEEcCCCCCCCccccchHH--HHHHHHHhccCCCeEEecc
Q 016578 234 KYDAIIVDSSDPVGPAQELVEKP--FFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 234 ~fDvII~D~~dp~~~~~~L~~~e--f~~~l~~~LkpgGvlv~q~ 275 (387)
.+|+||-.... .+ .++...+. ++|.++...
T Consensus 254 g~Dvvid~~G~----------~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 254 GVNVAMDFVGS----------QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp CEEEEEESSCC----------HHHHHHGGGGEE--EEEEEEECC
T ss_pred CCcEEEECCCC----------chHHHHHHHhhc--CCCEEEEEe
Confidence 69998843321 11 34455555 899988643
No 477
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=83.43 E-value=10 Score=36.15 Aligned_cols=110 Identities=15% Similarity=0.207 Sum_probs=56.0
Q ss_pred CCCEEEEEcCcccHHH--HHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 160 SPKTVLVVGGGDGGVL--REISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~--~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
+..+|.+||+|.=+.+ ..++...-..+++.+|++++.++-...-+.+.. .+. .++++..++-.. + ..-|+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~-~~~~i~~~~~~a-~-----~~aDv 79 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL-PFT-SPKKIYSAEYSD-A-----KDADL 79 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGGG-G-----GGCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH-Hhc-CCeEEEECCHHH-h-----CCCCE
Confidence 4469999998643322 223333435689999999876643222121111 111 355666544222 2 24789
Q ss_pred EEEcCCCCCCCcc---cc--chHHHHHHHHHh---ccCCCeEEeccccc
Q 016578 238 IIVDSSDPVGPAQ---EL--VEKPFFDTIAKA---LRPGGVLCNMAESM 278 (387)
Q Consensus 238 II~D~~dp~~~~~---~L--~~~ef~~~l~~~---LkpgGvlv~q~~s~ 278 (387)
||+-...|..+.. .+ .+...++.+.+. ..|+|++++- .||
T Consensus 80 Vii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNP 127 (326)
T 2zqz_A 80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA-ANP 127 (326)
T ss_dssp EEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC-SSS
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe-CCc
Confidence 9987655543321 11 122333333332 2799998874 454
No 478
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=83.29 E-value=8.7 Score=34.08 Aligned_cols=79 Identities=14% Similarity=0.191 Sum_probs=48.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcch--h------hHHhh
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDA--V------EFLRQ 229 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~--~------~~l~~ 229 (387)
+.++||+.|++ |+++++++++. ...+|++++.++.-.+...+.+... ..+++.++..|. . ++++.
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA----GQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc----CCCCceEEEeccccCCHHHHHHHHHH
Confidence 34677877765 55666655431 1258999999988877766665433 124667777665 1 12211
Q ss_pred C--CCCCeeEEEEcCC
Q 016578 230 V--PRGKYDAIIVDSS 243 (387)
Q Consensus 230 ~--~~~~fDvII~D~~ 243 (387)
. .-++.|++|..+.
T Consensus 88 ~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1 0137999998764
No 479
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=83.26 E-value=12 Score=34.50 Aligned_cols=78 Identities=17% Similarity=0.228 Sum_probs=51.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhc--CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~--~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
+.|.+|+-|++. ++++.+++. ....+|+.+|.+++-++...+.+... ..++..+..|..+. +++.
T Consensus 6 ~gKvalVTGas~-GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-----g~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGS-GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-----GKEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 456777777655 456655543 12368999999999888777766543 35788888887532 1111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-++.|++|.++-
T Consensus 80 ~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 80 ETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCc
Confidence 1257999998763
No 480
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.17 E-value=9.3 Score=34.88 Aligned_cols=108 Identities=16% Similarity=0.156 Sum_probs=58.5
Q ss_pred CCCEEEEEcCcccHHHHHH----HhcCCCceEEEE-eCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------Hh
Q 016578 160 SPKTVLVVGGGDGGVLREI----SRHDSVELIDIC-EIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LR 228 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el----~k~~~~~~Vt~V-EiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~ 228 (387)
..+.||+.|++. ++++++ ++.+ .+|+++ ..+++..+...+.+... ..++.++..|..+. ++
T Consensus 26 ~~k~~lVTGas~-GIG~aia~~la~~G--~~Vv~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~ 97 (267)
T 3u5t_A 26 TNKVAIVTGASR-GIGAAIAARLASDG--FTVVINYAGKAAAAEEVAGKIEAA-----GGKALTAQADVSDPAAVRRLFA 97 (267)
T ss_dssp -CCEEEEESCSS-HHHHHHHHHHHHHT--CEEEEEESSCSHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHH
Confidence 456888888664 455554 4443 477776 44555555544444332 35788888887542 11
Q ss_pred hC--CCCCeeEEEEcCCCC-CCCccccch--------------HHHHHHHHHhccCCCeEEecc
Q 016578 229 QV--PRGKYDAIIVDSSDP-VGPAQELVE--------------KPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 229 ~~--~~~~fDvII~D~~dp-~~~~~~L~~--------------~ef~~~l~~~LkpgGvlv~q~ 275 (387)
.. .-++.|++|.++.-. ..+....-. ....+.+...|+++|.++..+
T Consensus 98 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 98 TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 11 014799999876432 122111111 123456666777788777543
No 481
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=83.15 E-value=11 Score=34.19 Aligned_cols=78 Identities=18% Similarity=0.144 Sum_probs=48.4
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhh------HHhhCC
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVE------FLRQVP 231 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~------~l~~~~ 231 (387)
+.++||+.|++ |++++.++++. ...+|++++.+++-.+...+.+.... .+.++..+..|..+ .+++.
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~- 83 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY---PDAILQPVVADLGTEQGCQDVIEKY- 83 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC---TTCEEEEEECCTTSHHHHHHHHHHC-
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC---CCceEEEEecCCCCHHHHHHHHHhc-
Confidence 45678887765 55665554431 13689999999877665555443321 13467788888743 22222
Q ss_pred CCCeeEEEEcCC
Q 016578 232 RGKYDAIIVDSS 243 (387)
Q Consensus 232 ~~~fDvII~D~~ 243 (387)
++.|++|.+..
T Consensus 84 -g~id~lv~nAg 94 (267)
T 3t4x_A 84 -PKVDILINNLG 94 (267)
T ss_dssp -CCCSEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 47999998764
No 482
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.05 E-value=7.2 Score=39.71 Aligned_cols=89 Identities=21% Similarity=0.315 Sum_probs=54.3
Q ss_pred CCCCEEEEEcCcc-cHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeE
Q 016578 159 PSPKTVLVVGGGD-GGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDA 237 (387)
Q Consensus 159 ~~p~~VL~IG~G~-G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDv 237 (387)
...++|+++|+|. |......++..+ .+|+++|.++.-.+.+++. + +++ .+..+.+ ...|+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~------G-----a~~--~~l~e~l-----~~aDv 332 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMME------G-----FDV--VTVEEAI-----GDADI 332 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT------T-----CEE--CCHHHHG-----GGCSE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc------C-----CEE--ecHHHHH-----hCCCE
Confidence 3567999999864 333334455544 4899999999887776553 1 111 2333332 25899
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 238 IIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 238 II~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
||..... ..++.. ...+.|++||+++..+
T Consensus 333 Vi~atgt-----~~~i~~----~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 333 VVTATGN-----KDIIML----EHIKAMKDHAILGNIG 361 (494)
T ss_dssp EEECSSS-----SCSBCH----HHHHHSCTTCEEEECS
T ss_pred EEECCCC-----HHHHHH----HHHHhcCCCcEEEEeC
Confidence 9875422 123332 3455689999998644
No 483
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=82.90 E-value=29 Score=32.17 Aligned_cols=70 Identities=17% Similarity=0.253 Sum_probs=41.3
Q ss_pred cCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHH-HHhcCCCceEEEEeCCHHHHHHHHhhc
Q 016578 133 DGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLRE-ISRHDSVELIDICEIDKMVIDVSKKYF 204 (387)
Q Consensus 133 DG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~e-l~k~~~~~~Vt~VEiD~~vi~~ar~~~ 204 (387)
||.+.-.+-|-.-+...+..... .+..+++|+||+|..+-+.. .+...+..+|+.+..+++-.+...+.+
T Consensus 99 dG~l~G~NTD~~Gf~~~L~~~g~--~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~ 169 (269)
T 3tum_A 99 DGRLLGDNVDGAGFLGAAHKHGF--EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELL 169 (269)
T ss_dssp TSCEEEECCHHHHHHHHHHHTTC--CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHH
T ss_pred CCEEEEEEcChHHHHHHHHHhCC--CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHH
Confidence 56666556665445555544322 34678999999875433322 223345789999999876554443433
No 484
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=82.87 E-value=11 Score=35.64 Aligned_cols=106 Identities=19% Similarity=0.338 Sum_probs=53.5
Q ss_pred EEEEEcC-c-ccHHHHHHHh-cCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEc--chhhHHhhCCCCCeeE
Q 016578 163 TVLVVGG-G-DGGVLREISR-HDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIG--DAVEFLRQVPRGKYDA 237 (387)
Q Consensus 163 ~VL~IG~-G-~G~~~~el~k-~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~g--D~~~~l~~~~~~~fDv 237 (387)
+|.+||+ | .|......+. ..-..+|+.+|+++ .-..+.. +.+. ....+++...+ |..+-+ ...|+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~d-L~~~---~~~~~l~~~~~t~d~~~a~-----~~aDv 71 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAAD-LSHI---ETRATVKGYLGPEQLPDCL-----KGCDV 71 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHHH-HTTS---SSSCEEEEEESGGGHHHHH-----TTCSE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHHH-Hhcc---CcCceEEEecCCCCHHHHh-----CCCCE
Confidence 7999996 5 3444333333 32236899999998 2222222 1111 11224555433 443323 24799
Q ss_pred EEEcCCCCCCCc---cccc--hHHHHHHHHHh---ccCCCeEEecccccc
Q 016578 238 IIVDSSDPVGPA---QELV--EKPFFDTIAKA---LRPGGVLCNMAESMW 279 (387)
Q Consensus 238 II~D~~dp~~~~---~~L~--~~ef~~~l~~~---LkpgGvlv~q~~s~~ 279 (387)
||+-...|..+. ..+. +...++.+.+. ..|++++++- .||.
T Consensus 72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~-sNPv 120 (314)
T 1mld_A 72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII-SNPV 120 (314)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC-SSCH
T ss_pred EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE-CCCc
Confidence 998765554332 1221 12333333332 3599988873 4553
No 485
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=82.80 E-value=17 Score=34.91 Aligned_cols=107 Identities=15% Similarity=0.145 Sum_probs=58.5
Q ss_pred CCCEEEEEcCcccHH--HHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEE-EcchhhHHhhCCCCCee
Q 016578 160 SPKTVLVVGGGDGGV--LREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLH-IGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~--~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~-~gD~~~~l~~~~~~~fD 236 (387)
+..+|.+||+|.-+. +..++...-..+++.+|++++.++--..-+.+.. .+.. ..+++ ..|.. .. ...|
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~-~~~~-~~~i~~~~d~~----~~--~~aD 89 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGS-LFLK-TPKIVSSKDYS----VT--ANSK 89 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTG-GGCS-CCEEEECSSGG----GG--TTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhh-hccC-CCeEEEcCCHH----Hh--CCCC
Confidence 456999999975333 4445555444689999999875543222122110 0111 22333 34532 22 3599
Q ss_pred EEEEcCCCCCCCc---cccch------HHHHHHHHHhccCCCeEEecc
Q 016578 237 AIIVDSSDPVGPA---QELVE------KPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 237 vII~D~~dp~~~~---~~L~~------~ef~~~l~~~LkpgGvlv~q~ 275 (387)
+||+-...|..|. ..|+. +++.+.+.+. .|++++++.+
T Consensus 90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvt 136 (331)
T 4aj2_A 90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVS 136 (331)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 9997655544331 23333 2344555554 8999888644
No 486
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=82.79 E-value=5.4 Score=37.21 Aligned_cols=79 Identities=22% Similarity=0.198 Sum_probs=49.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..++||+.|++ |++++.+++.. ...+|++++.+++-.+...+.+... ...++.++.+|..+. ++..
T Consensus 40 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGT-KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL----GAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS----SSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh----CCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 45677777765 45555554431 1258999999987766665555432 125788999998643 1111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-++.|++|.+..
T Consensus 115 ~~~g~iD~lvnnAg 128 (293)
T 3rih_A 115 DAFGALDVVCANAG 128 (293)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1246899997754
No 487
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=82.78 E-value=9.1 Score=36.42 Aligned_cols=71 Identities=15% Similarity=0.274 Sum_probs=45.1
Q ss_pred CCCEEEEEcCcc-c-HHHHHHHhcCCCceEE-EEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCee
Q 016578 160 SPKTVLVVGGGD-G-GVLREISRHDSVELID-ICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYD 236 (387)
Q Consensus 160 ~p~~VL~IG~G~-G-~~~~el~k~~~~~~Vt-~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fD 236 (387)
++.+|.+||+|. | ..+..+.++.+..+++ ++|.+++-.+.+.+.+. + -...|..+.+.+ ...|
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~----------~-~~~~~~~~ll~~---~~~D 77 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTG----------A-RGHASLTDMLAQ---TDAD 77 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHC----------C-EEESCHHHHHHH---CCCS
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcC----------C-ceeCCHHHHhcC---CCCC
Confidence 456999999994 2 3445555552334544 78999987766554431 2 245677777754 3699
Q ss_pred EEEEcCCC
Q 016578 237 AIIVDSSD 244 (387)
Q Consensus 237 vII~D~~d 244 (387)
+|++-.++
T Consensus 78 ~V~i~tp~ 85 (354)
T 3q2i_A 78 IVILTTPS 85 (354)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99986654
No 488
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=82.77 E-value=16 Score=33.15 Aligned_cols=78 Identities=19% Similarity=0.246 Sum_probs=48.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------Hhh--
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQ-- 229 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~-- 229 (387)
..++||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-----GLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 35678888864 55666655431 1258999999987666554444322 34788888887432 111
Q ss_pred -CCCCCeeEEEEcCC
Q 016578 230 -VPRGKYDAIIVDSS 243 (387)
Q Consensus 230 -~~~~~fDvII~D~~ 243 (387)
.-.++.|++|....
T Consensus 94 ~~~~g~id~lv~nAg 108 (273)
T 1ae1_A 94 HVFDGKLNILVNNAG 108 (273)
T ss_dssp HHTTSCCCEEEECCC
T ss_pred HHcCCCCcEEEECCC
Confidence 11157999998764
No 489
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=82.71 E-value=6.1 Score=36.26 Aligned_cols=78 Identities=15% Similarity=0.138 Sum_probs=49.1
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..++||+.|++ |++++.+++.. ...+|++++.+++-.+...+.+... ..++.++..|..+. ++..
T Consensus 25 ~gk~~lVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 25 GGRTALVTGSS-RGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-----GHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45677777755 55665554431 1258999999988777666655432 35788888887532 1111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-++.|++|.++.
T Consensus 99 ~~~g~iD~lv~nAg 112 (271)
T 4ibo_A 99 EQGIDVDILVNNAG 112 (271)
T ss_dssp HHTCCCCEEEECCC
T ss_pred HHCCCCCEEEECCC
Confidence 1247999998764
No 490
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=82.69 E-value=5.6 Score=37.70 Aligned_cols=99 Identities=17% Similarity=0.245 Sum_probs=54.6
Q ss_pred CCEEEEEcCcccH--HHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 161 PKTVLVVGGGDGG--VLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 161 p~~VL~IG~G~G~--~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
..+|-+||+|..+ ++..++......+|+.+|++++....+.+.. .. ..++++.. .|. ... ..-|+|
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~-~~----~~~~i~~t-~d~----~~l--~~aD~V 81 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLE-IF----NLPNVEIS-KDL----SAS--AHSKVV 81 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHH-HH----TCTTEEEE-SCG----GGG--TTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHh-hh----cCCCeEEe-CCH----HHH--CCCCEE
Confidence 4589999999533 6666666655568999999986333333322 11 22467663 563 222 258999
Q ss_pred EEcCCCCCCCcc---ccc------hHHHHHHHHHhccCCCeEEe
Q 016578 239 IVDSSDPVGPAQ---ELV------EKPFFDTIAKALRPGGVLCN 273 (387)
Q Consensus 239 I~D~~dp~~~~~---~L~------~~ef~~~l~~~LkpgGvlv~ 273 (387)
|.....+ .+.. .+. .+++++.+.+.. |++++++
T Consensus 82 i~aag~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 123 (303)
T 2i6t_A 82 IFTVNSL-GSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLV 123 (303)
T ss_dssp EECCCC-----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEE
T ss_pred EEcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE
Confidence 9765433 1211 111 234566666654 9999865
No 491
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=82.62 E-value=13 Score=33.62 Aligned_cols=80 Identities=14% Similarity=0.217 Sum_probs=49.5
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
..+.||+.|++. ++++++++.. ...+|++++.+++-.+...+.+... ....++.++..|..+. ++..
T Consensus 7 ~~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 7 SEAVAVVTGGSS-GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR---FPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---STTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---cCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 456788888664 4555554431 1258999999988777666655431 1234688888887542 1111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-++.|++|.+..
T Consensus 83 ~~~g~id~lvnnAg 96 (265)
T 3lf2_A 83 RTLGCASILVNNAG 96 (265)
T ss_dssp HHHCSCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0147899998764
No 492
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=82.58 E-value=6.2 Score=31.22 Aligned_cols=78 Identities=15% Similarity=0.094 Sum_probs=51.5
Q ss_pred ceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHh
Q 016578 185 ELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKA 264 (387)
Q Consensus 185 ~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~ 264 (387)
.+|..||-|+...+..++.+... +-++. ...|+.+.+.......+|+||+|..-|.+. .-..++++.+++.
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~---~~g~~~~~~l~~~ 77 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSPL-----DVTIQ-CFASAESFMRQQISDDAIGMIIEAHLEDKK---DSGIELLETLVKR 77 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTS-----SSEEE-EESSHHHHTTSCCCTTEEEEEEETTGGGBT---THHHHHHHHHHHT
T ss_pred CeEEEEcCCHHHHHHHHHHHHHC-----CcEEE-EeCCHHHHHHHHhccCCCEEEEeCcCCCCC---ccHHHHHHHHHhC
Confidence 48999999999999998887643 12333 556777776655556899999998654310 1134567777765
Q ss_pred ccCCCeEE
Q 016578 265 LRPGGVLC 272 (387)
Q Consensus 265 LkpgGvlv 272 (387)
- ++-.++
T Consensus 78 ~-~~~~ii 84 (136)
T 3kto_A 78 G-FHLPTI 84 (136)
T ss_dssp T-CCCCEE
T ss_pred C-CCCCEE
Confidence 3 444443
No 493
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=82.58 E-value=6.4 Score=36.17 Aligned_cols=79 Identities=14% Similarity=0.156 Sum_probs=49.0
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
+.+.||+.|++ |++++++++.. ...+|++++.+++-.+...+.+... ..++.++.+|..+. ++..
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-----GGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-----TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 45677877755 55666655431 1358999999887666655554432 35788888887532 1111
Q ss_pred CCCCeeEEEEcCCC
Q 016578 231 PRGKYDAIIVDSSD 244 (387)
Q Consensus 231 ~~~~fDvII~D~~d 244 (387)
..++.|++|.++..
T Consensus 106 ~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 106 AIAPVDILVINASA 119 (275)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 01479999987653
No 494
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=82.55 E-value=0.88 Score=43.55 Aligned_cols=95 Identities=11% Similarity=0.018 Sum_probs=56.6
Q ss_pred CEEEEEc--CcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCC-CCCeeEE
Q 016578 162 KTVLVVG--GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVP-RGKYDAI 238 (387)
Q Consensus 162 ~~VL~IG--~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~-~~~fDvI 238 (387)
++||+.| +|-|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+.. ...+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEG-FRPIVTVRRDEQIALLKDIGA-------AHVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESCGGGHHHHHHHTC-------SEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------CEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 4666653 234566666777754 489999999988888876421 1001111123333333321 2369988
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecc
Q 016578 239 IVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMA 275 (387)
Q Consensus 239 I~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~ 275 (387)
|-.... +.++.+.+.|+++|.++...
T Consensus 238 id~~g~-----------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 238 LDAVTG-----------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EESSCH-----------HHHHHHHHHSCTTCEEEECC
T ss_pred EECCCC-----------hhHHHHHhhhcCCCEEEEEe
Confidence 743321 23477889999999998643
No 495
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=82.55 E-value=8.6 Score=35.19 Aligned_cols=77 Identities=16% Similarity=0.230 Sum_probs=48.7
Q ss_pred CCEEEEEcCcccHHHHHHHhcC--CCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC--
Q 016578 161 PKTVLVVGGGDGGVLREISRHD--SVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV-- 230 (387)
Q Consensus 161 p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~-- 230 (387)
.++||+.|++ |++++.+++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-----GGTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4577777765 55666555431 2368999999988777766655433 35788888887532 1111
Q ss_pred CCCCeeEEEEcCC
Q 016578 231 PRGKYDAIIVDSS 243 (387)
Q Consensus 231 ~~~~fDvII~D~~ 243 (387)
.-++.|++|.+..
T Consensus 78 ~~g~iD~lVnnAG 90 (264)
T 3tfo_A 78 TWGRIDVLVNNAG 90 (264)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 0147999998754
No 496
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=82.53 E-value=9.6 Score=34.60 Aligned_cols=78 Identities=19% Similarity=0.176 Sum_probs=47.9
Q ss_pred CCCEEEEEcCcccHHHHHHHhcC--CCceEEEEeC-CHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC
Q 016578 160 SPKTVLVVGGGDGGVLREISRHD--SVELIDICEI-DKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~~--~~~~Vt~VEi-D~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~ 230 (387)
..++||+.|++ |++++++++.. ...+|++++. ++...+..++.+... ..++.++..|..+. +++.
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 28 TGKNVLITGAS-KGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-----GYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp SCCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHH
Confidence 45678887765 45665554431 1258988888 666666655555432 35788999887532 2111
Q ss_pred --CCCCeeEEEEcCC
Q 016578 231 --PRGKYDAIIVDSS 243 (387)
Q Consensus 231 --~~~~fDvII~D~~ 243 (387)
..++.|++|..+.
T Consensus 102 ~~~~g~id~li~nAg 116 (271)
T 4iin_A 102 VQSDGGLSYLVNNAG 116 (271)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 1247999998764
No 497
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=82.45 E-value=3.2 Score=40.31 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=23.8
Q ss_pred CCCEEEEEcCcc-cHH-HHHHHhcCCCceEEEEeCCH
Q 016578 160 SPKTVLVVGGGD-GGV-LREISRHDSVELIDICEIDK 194 (387)
Q Consensus 160 ~p~~VL~IG~G~-G~~-~~el~k~~~~~~Vt~VEiD~ 194 (387)
...+||+||+|+ |.. +..+++ .++.+++.||-|.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~-aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIA-WGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEecCCE
Confidence 356999999873 333 333444 4689999999875
No 498
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=82.42 E-value=9.9 Score=34.76 Aligned_cols=79 Identities=16% Similarity=0.112 Sum_probs=48.3
Q ss_pred CCCEEEEEcCcccHHHHHHHhc--CCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------HhhC-
Q 016578 160 SPKTVLVVGGGDGGVLREISRH--DSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQV- 230 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el~k~--~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~~- 230 (387)
+.++||+.|++ |++++.++++ ....+|++++.+.+-.+...+.+... ...++.++.+|..+. ++..
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 26 RDKVAFITGGG-SGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA----TGRRCLPLSMDVRAPPAVMAAVDQAL 100 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----HSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 35678888865 4566665543 12358999999987665554444221 135788898887532 1111
Q ss_pred -CCCCeeEEEEcCC
Q 016578 231 -PRGKYDAIIVDSS 243 (387)
Q Consensus 231 -~~~~fDvII~D~~ 243 (387)
.-++.|++|.+..
T Consensus 101 ~~~g~id~lv~nAg 114 (277)
T 4fc7_A 101 KEFGRIDILINCAA 114 (277)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCc
Confidence 0147999998764
No 499
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=82.37 E-value=14 Score=33.00 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=47.3
Q ss_pred CCCEEEEEcCcccHHHHHH----HhcCCCceEEEEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhH------Hhh
Q 016578 160 SPKTVLVVGGGDGGVLREI----SRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF------LRQ 229 (387)
Q Consensus 160 ~p~~VL~IG~G~G~~~~el----~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~------l~~ 229 (387)
+.++||+.|++.| +++++ ++.. .+|++++.+++-++...+.+ ..++.++..|..+. +++
T Consensus 8 ~~k~vlITGas~g-IG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~ 76 (261)
T 3n74_A 8 EGKVALITGAGSG-FGEGMAKRFAKGG--AKVVIVDRDKAGAERVAGEI--------GDAALAVAADISKEADVDAAVEA 76 (261)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHh--------CCceEEEEecCCCHHHHHHHHHH
Confidence 4568899887644 44444 4443 58999999988777665543 24788888887532 111
Q ss_pred C--CCCCeeEEEEcCC
Q 016578 230 V--PRGKYDAIIVDSS 243 (387)
Q Consensus 230 ~--~~~~fDvII~D~~ 243 (387)
. .-++.|++|....
T Consensus 77 ~~~~~g~id~li~~Ag 92 (261)
T 3n74_A 77 ALSKFGKVDILVNNAG 92 (261)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHhcCCCCEEEECCc
Confidence 1 0136899998764
No 500
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=82.35 E-value=8.6 Score=36.43 Aligned_cols=69 Identities=22% Similarity=0.245 Sum_probs=42.2
Q ss_pred CEEEEEcCcccH--HHHHHHhcCCCceEE-EEeCCHHHHHHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEE
Q 016578 162 KTVLVVGGGDGG--VLREISRHDSVELID-ICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAI 238 (387)
Q Consensus 162 ~~VL~IG~G~G~--~~~el~k~~~~~~Vt-~VEiD~~vi~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvI 238 (387)
.+|.+||+|.-+ .+..+.+++ ..+++ ++|.+++..+.+.+.+. +.-...|..+.+.+ ...|+|
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~---~~~D~V 68 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMID-DAILYAISDVREDRLREMKEKLG----------VEKAYKDPHELIED---PNVDAV 68 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGST-TEEEEEEECSCHHHHHHHHHHHT----------CSEEESSHHHHHHC---TTCCEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHhC----------CCceeCCHHHHhcC---CCCCEE
Confidence 379999998533 233344444 34555 67999987665554432 11234677776652 368999
Q ss_pred EEcCCC
Q 016578 239 IVDSSD 244 (387)
Q Consensus 239 I~D~~d 244 (387)
++-.++
T Consensus 69 ~i~tp~ 74 (344)
T 3ezy_A 69 LVCSST 74 (344)
T ss_dssp EECSCG
T ss_pred EEcCCC
Confidence 986654
Done!