Query 016581
Match_columns 387
No_of_seqs 165 out of 1390
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 15:58:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016581.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016581hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ppg_A 5-methyltetrahydroptero 100.0 6.7E-78 2.3E-82 636.9 32.1 349 1-356 24-789 (789)
2 1u1j_A 5-methyltetrahydroptero 100.0 3.3E-70 1.1E-74 585.5 36.1 348 1-354 1-370 (765)
3 2nq5_A 5-methyltetrahydroptero 100.0 8.8E-71 3E-75 588.3 31.5 346 1-357 4-746 (755)
4 1t7l_A 5-methyltetrahydroptero 100.0 1E-69 3.5E-74 572.1 34.4 344 2-357 34-765 (766)
5 3rpd_A Methionine synthase (B1 100.0 1.5E-66 5.3E-71 512.6 26.3 318 1-360 18-357 (357)
6 1ypx_A Putative vitamin-B12 in 100.0 5.1E-65 1.7E-69 506.1 21.4 323 1-357 7-369 (375)
7 1u1j_A 5-methyltetrahydroptero 100.0 2.5E-60 8.5E-65 509.1 26.6 323 1-357 432-762 (765)
8 1t7l_A 5-methyltetrahydroptero 100.0 1E-32 3.6E-37 290.9 16.1 180 1-214 436-617 (766)
9 3ppg_A 5-methyltetrahydroptero 100.0 6.5E-31 2.2E-35 278.4 17.5 178 1-213 463-643 (789)
10 2nq5_A 5-methyltetrahydroptero 100.0 2.2E-29 7.6E-34 269.0 13.0 180 1-214 417-598 (755)
11 2inf_A URO-D, UPD, uroporphyri 99.7 4.6E-17 1.6E-21 160.5 17.6 206 136-355 130-352 (359)
12 1j93_A UROD, uroporphyrinogen 99.7 1.5E-17 5.3E-22 163.4 9.0 205 136-352 129-351 (353)
13 3cyv_A URO-D, UPD, uroporphyri 99.5 7.3E-14 2.5E-18 137.2 15.3 208 137-356 124-352 (354)
14 1r3s_A URO-D, uroporphyrinogen 99.5 2.8E-13 9.7E-18 133.7 17.8 208 137-356 134-364 (367)
15 2eja_A URO-D, UPD, uroporphyri 99.4 3.7E-13 1.2E-17 131.4 11.3 202 137-352 117-335 (338)
16 4ay7_A Methylcobalamin\: coenz 99.4 4.3E-12 1.5E-16 124.3 16.4 203 137-352 133-346 (348)
17 4exq_A UPD, URO-D, uroporphyri 99.3 1.6E-10 5.5E-15 114.1 18.2 209 137-357 129-363 (368)
18 3inp_A D-ribulose-phosphate 3- 95.0 0.14 4.7E-06 47.2 10.2 139 188-350 42-190 (246)
19 3cu2_A Ribulose-5-phosphate 3- 94.4 0.22 7.7E-06 45.5 10.1 79 189-280 29-115 (237)
20 3ovp_A Ribulose-phosphate 3-ep 94.4 0.24 8.3E-06 44.9 10.3 136 188-347 19-165 (228)
21 3ctl_A D-allulose-6-phosphate 94.2 0.44 1.5E-05 43.3 11.6 137 188-350 15-162 (231)
22 1tx2_A DHPS, dihydropteroate s 92.4 3.3 0.00011 38.9 14.8 146 189-346 66-224 (297)
23 3k13_A 5-methyltetrahydrofolat 92.3 0.76 2.6E-05 43.4 10.3 173 189-371 40-244 (300)
24 1aj0_A DHPS, dihydropteroate s 92.1 4.8 0.00017 37.5 15.5 146 190-346 42-205 (282)
25 2yci_X 5-methyltetrahydrofolat 92.0 1.7 5.8E-05 40.4 12.2 146 190-349 38-193 (271)
26 1tqj_A Ribulose-phosphate 3-ep 91.5 1.9 6.4E-05 38.9 11.7 141 189-350 20-168 (230)
27 1eye_A DHPS 1, dihydropteroate 89.1 14 0.00049 34.2 16.8 146 190-346 33-197 (280)
28 1tqx_A D-ribulose-5-phosphate 87.9 1.5 5E-05 39.7 7.8 138 188-349 20-171 (227)
29 1h1y_A D-ribulose-5-phosphate 86.7 5.5 0.00019 35.5 11.0 87 189-280 22-111 (228)
30 3rhg_A Putative phophotriester 86.5 4.6 0.00016 39.0 11.0 94 236-332 193-299 (365)
31 3k2g_A Resiniferatoxin-binding 83.1 6.4 0.00022 38.0 10.3 93 236-331 203-308 (364)
32 3o63_A Probable thiamine-phosp 82.9 25 0.00084 31.8 13.6 108 193-326 50-163 (243)
33 2ob3_A Parathion hydrolase; me 80.8 13 0.00044 35.0 11.4 91 236-330 161-270 (330)
34 2fli_A Ribulose-phosphate 3-ep 78.1 29 0.001 30.0 12.3 138 189-347 19-162 (220)
35 3gtx_A Organophosphorus hydrol 77.2 23 0.0008 33.6 12.0 127 198-331 151-284 (339)
36 1q7z_A 5-methyltetrahydrofolat 76.9 51 0.0018 33.6 15.1 135 182-332 122-277 (566)
37 2vp8_A Dihydropteroate synthas 75.8 54 0.0018 30.9 14.1 146 190-346 69-237 (318)
38 1f6y_A 5-methyltetrahydrofolat 74.9 37 0.0013 31.0 12.2 147 188-349 27-184 (262)
39 3nl6_A Thiamine biosynthetic b 72.3 11 0.00037 38.4 8.6 65 190-267 29-93 (540)
40 3tn4_A Phosphotriesterase; lac 70.6 74 0.0025 30.4 13.7 91 236-329 206-302 (360)
41 1xi3_A Thiamine phosphate pyro 69.6 53 0.0018 28.1 14.6 66 189-267 29-94 (215)
42 2v82_A 2-dehydro-3-deoxy-6-pho 67.9 22 0.00074 30.9 8.7 108 189-326 22-129 (212)
43 1vzw_A Phosphoribosyl isomeras 67.7 9.8 0.00034 33.9 6.5 65 193-266 39-104 (244)
44 3tr9_A Dihydropteroate synthas 67.1 84 0.0029 29.5 16.2 145 189-345 52-221 (314)
45 3ovg_A Amidohydrolase; structu 64.9 51 0.0018 31.6 11.3 91 236-331 182-278 (363)
46 2y5s_A DHPS, dihydropteroate s 64.8 90 0.0031 29.0 15.4 133 190-333 50-201 (294)
47 4djd_D C/Fe-SP, corrinoid/iron 64.2 97 0.0033 29.2 15.3 141 189-348 83-237 (323)
48 3mcm_A 2-amino-4-hydroxy-6-hyd 64.0 52 0.0018 32.5 11.3 148 189-347 215-387 (442)
49 3vnd_A TSA, tryptophan synthas 61.7 96 0.0033 28.3 13.5 76 188-266 34-130 (267)
50 3pnz_A Phosphotriesterase fami 61.4 95 0.0033 29.1 12.4 142 182-332 129-277 (330)
51 1yad_A Regulatory protein TENI 61.3 81 0.0028 27.3 13.6 105 192-327 35-139 (221)
52 2vef_A Dihydropteroate synthas 59.8 1.1E+02 0.0039 28.5 14.0 69 190-264 37-110 (314)
53 1nvm_A HOA, 4-hydroxy-2-oxoval 58.0 1.2E+02 0.0043 28.4 14.1 140 189-344 33-186 (345)
54 2h9a_B CO dehydrogenase/acetyl 56.2 1.3E+02 0.0045 28.1 15.2 143 187-348 75-230 (310)
55 2ffi_A 2-pyrone-4,6-dicarboxyl 55.6 90 0.0031 27.8 10.8 135 190-332 96-241 (288)
56 1rpx_A Protein (ribulose-phosp 54.0 50 0.0017 28.9 8.6 84 189-280 26-116 (230)
57 3hgj_A Chromate reductase; TIM 51.7 75 0.0026 30.0 9.9 90 176-266 143-259 (349)
58 1vhc_A Putative KHG/KDPG aldol 51.3 58 0.002 28.9 8.5 84 190-291 33-116 (224)
59 3l5l_A Xenobiotic reductase A; 47.1 83 0.0028 29.9 9.4 90 176-266 149-266 (363)
60 1ur4_A Galactanase; hydrolase, 46.5 2.1E+02 0.0072 27.6 15.8 90 176-266 131-232 (399)
61 3noy_A 4-hydroxy-3-methylbut-2 46.3 81 0.0028 30.3 8.9 123 187-326 47-184 (366)
62 1thf_D HISF protein; thermophI 45.3 71 0.0024 28.1 8.2 67 193-266 37-103 (253)
63 3kru_A NADH:flavin oxidoreduct 44.4 1.2E+02 0.0042 28.6 10.1 89 176-266 134-249 (343)
64 3gg7_A Uncharacterized metallo 43.0 1.2E+02 0.004 27.4 9.3 24 308-331 177-200 (254)
65 3ipw_A Hydrolase TATD family p 42.2 66 0.0023 30.3 7.7 95 221-331 155-251 (325)
66 3l0g_A Nicotinate-nucleotide p 42.1 74 0.0025 29.7 7.8 60 191-266 219-279 (300)
67 3gka_A N-ethylmaleimide reduct 41.3 88 0.003 29.9 8.5 103 176-280 152-284 (361)
68 3gr7_A NADPH dehydrogenase; fl 41.3 1.2E+02 0.004 28.6 9.4 88 176-266 135-249 (340)
69 1yyp_B DNA polymerase, POL; pr 40.7 6.9 0.00024 22.7 0.3 17 359-375 2-20 (26)
70 1q7z_A 5-methyltetrahydrofolat 40.7 3E+02 0.01 27.8 14.2 143 186-348 340-495 (566)
71 2yw3_A 4-hydroxy-2-oxoglutarat 40.6 76 0.0026 27.6 7.4 104 190-326 29-132 (207)
72 1z41_A YQJM, probable NADH-dep 40.5 1.3E+02 0.0044 28.2 9.5 88 176-266 135-249 (338)
73 1h5y_A HISF; histidine biosynt 40.2 65 0.0022 28.1 7.0 70 190-266 37-106 (253)
74 1mxs_A KDPG aldolase; 2-keto-3 40.2 70 0.0024 28.3 7.2 84 190-291 42-125 (225)
75 1ydn_A Hydroxymethylglutaryl-C 39.9 2.2E+02 0.0074 25.9 11.5 145 189-346 29-194 (295)
76 4h3d_A 3-dehydroquinate dehydr 39.7 88 0.003 28.3 7.9 159 191-371 37-231 (258)
77 4ab4_A Xenobiotic reductase B; 39.3 99 0.0034 29.5 8.5 32 176-208 144-175 (362)
78 1rd5_A Tryptophan synthase alp 39.1 2.1E+02 0.007 25.4 14.1 24 187-210 33-56 (262)
79 4hb7_A Dihydropteroate synthas 39.0 2.3E+02 0.0078 25.9 15.4 130 191-332 35-177 (270)
80 3b4u_A Dihydrodipicolinate syn 38.7 1.5E+02 0.005 27.2 9.5 78 186-266 24-105 (294)
81 1wbh_A KHG/KDPG aldolase; lyas 38.7 1E+02 0.0034 27.0 7.9 84 190-291 32-115 (214)
82 1zzm_A Putative deoxyribonucle 38.4 88 0.003 27.4 7.7 95 221-331 115-211 (259)
83 3p6l_A Sugar phosphate isomera 37.5 2E+02 0.007 24.9 10.4 127 188-329 24-166 (262)
84 3lmz_A Putative sugar isomeras 37.3 1.7E+02 0.0058 25.4 9.5 126 188-328 32-164 (257)
85 3tqv_A Nicotinate-nucleotide p 36.6 1E+02 0.0035 28.6 7.8 60 191-266 210-270 (287)
86 2nx9_A Oxaloacetate decarboxyl 36.4 94 0.0032 30.8 8.1 70 188-264 160-231 (464)
87 3s5o_A 4-hydroxy-2-oxoglutarat 36.2 1.8E+02 0.0062 26.8 9.7 78 186-266 35-116 (307)
88 2y1h_A Putative deoxyribonucle 35.6 2E+02 0.0068 25.3 9.7 82 236-331 139-220 (272)
89 3flu_A DHDPS, dihydrodipicolin 35.1 2.6E+02 0.0089 25.5 10.6 78 186-266 28-109 (297)
90 3n22_A Protein S100-A2; EF-han 35.0 71 0.0024 24.1 5.5 26 15-40 11-41 (98)
91 1lt8_A Betaine-homocysteine me 34.9 3.2E+02 0.011 26.4 13.7 76 181-267 134-217 (406)
92 2ekm_A Hypothetical protein ST 34.8 81 0.0028 26.4 6.0 63 250-318 95-159 (162)
93 3e2v_A 3'-5'-exonuclease; stru 33.9 2.8E+02 0.0095 26.9 10.8 83 236-330 196-306 (401)
94 3a5f_A Dihydrodipicolinate syn 33.5 2.8E+02 0.0094 25.2 10.5 78 186-266 22-103 (291)
95 3l21_A DHDPS, dihydrodipicolin 33.3 2.5E+02 0.0086 25.8 10.2 78 186-266 36-117 (304)
96 3nxa_A Protein S100-A16; S100 32.9 81 0.0028 23.8 5.6 26 15-40 11-42 (100)
97 3ly0_A Dipeptidase AC. metallo 32.8 2.4E+02 0.0081 27.0 10.0 56 272-330 248-310 (364)
98 4i6k_A Amidohydrolase family p 32.5 2.7E+02 0.0094 24.9 10.8 134 190-333 109-254 (294)
99 3rcm_A TATD family hydrolase; 32.4 80 0.0027 29.0 6.5 25 308-332 190-214 (287)
100 3a98_A DOCK2, dedicator of cyt 32.3 71 0.0024 27.2 5.7 48 15-62 129-176 (184)
101 3fkr_A L-2-keto-3-deoxyarabona 32.3 2.7E+02 0.0093 25.6 10.2 78 186-266 29-110 (309)
102 3na8_A Putative dihydrodipicol 32.2 2.5E+02 0.0085 26.0 9.9 78 186-266 45-126 (315)
103 1icp_A OPR1, 12-oxophytodienoa 32.0 2.3E+02 0.0079 27.0 9.9 85 181-266 162-276 (376)
104 2r14_A Morphinone reductase; H 31.9 1.3E+02 0.0043 28.9 8.0 89 176-266 157-275 (377)
105 1vyr_A Pentaerythritol tetrani 31.8 2.4E+02 0.0081 26.7 9.9 89 176-266 152-271 (364)
106 2y88_A Phosphoribosyl isomeras 31.7 96 0.0033 27.1 6.7 68 192-267 37-104 (244)
107 3daq_A DHDPS, dihydrodipicolin 31.5 2.6E+02 0.0089 25.4 9.9 78 186-266 23-104 (292)
108 4eto_A Protein S100-A4; calciu 31.5 89 0.003 23.2 5.5 26 15-40 10-40 (93)
109 3d0c_A Dihydrodipicolinate syn 31.4 2.5E+02 0.0084 26.0 9.8 77 186-266 33-113 (314)
110 1xky_A Dihydrodipicolinate syn 31.4 3.1E+02 0.01 25.1 10.6 78 186-266 33-114 (301)
111 2yxg_A DHDPS, dihydrodipicolin 31.1 2.9E+02 0.0098 25.1 10.1 78 186-266 21-102 (289)
112 3qze_A DHDPS, dihydrodipicolin 30.7 3E+02 0.01 25.4 10.3 78 186-266 44-125 (314)
113 3cpr_A Dihydrodipicolinate syn 30.5 3.2E+02 0.011 25.0 11.1 78 186-266 37-118 (304)
114 2d16_A Hypothetical protein PH 30.3 24 0.00082 29.6 2.1 32 286-318 126-158 (162)
115 2i7g_A Monooxygenase, AGR_C_41 30.3 1E+02 0.0034 29.3 7.0 57 298-356 306-363 (376)
116 1nfp_A LUXF gene product; flav 30.2 94 0.0032 26.9 6.3 29 299-327 170-199 (228)
117 3tak_A DHDPS, dihydrodipicolin 30.2 2.5E+02 0.0086 25.5 9.5 78 186-266 22-103 (291)
118 2wkj_A N-acetylneuraminate lya 30.0 3E+02 0.01 25.2 10.1 78 186-266 32-113 (303)
119 2ehh_A DHDPS, dihydrodipicolin 30.0 3.2E+02 0.011 24.8 10.5 78 186-266 21-102 (294)
120 2dqw_A Dihydropteroate synthas 30.0 3.3E+02 0.011 25.1 13.3 143 191-345 57-216 (294)
121 2hsa_B 12-oxophytodienoate red 30.0 1.1E+02 0.0037 29.7 7.2 31 176-207 162-192 (402)
122 3zwh_A Protein S100-A4; Ca-bin 29.6 96 0.0033 23.7 5.5 26 15-40 13-43 (104)
123 2tps_A Protein (thiamin phosph 29.3 1.2E+02 0.004 26.1 6.8 69 189-267 34-102 (227)
124 2yr1_A 3-dehydroquinate dehydr 29.1 2.1E+02 0.0073 25.6 8.7 127 192-328 38-181 (257)
125 3tva_A Xylose isomerase domain 29.1 1.8E+02 0.006 25.8 8.2 83 183-266 99-184 (290)
126 1o4u_A Type II quinolic acid p 28.6 54 0.0018 30.4 4.5 63 191-266 205-268 (285)
127 2ojp_A DHDPS, dihydrodipicolin 28.5 3E+02 0.01 25.0 9.7 78 186-266 22-103 (292)
128 1vgg_A Conserved hypothetical 28.4 23 0.00078 29.7 1.6 25 286-310 126-151 (161)
129 2r8w_A AGR_C_1641P; APC7498, d 28.4 3.1E+02 0.011 25.6 9.9 78 186-266 55-136 (332)
130 3paj_A Nicotinate-nucleotide p 28.3 1.9E+02 0.0064 27.2 8.2 59 191-265 243-302 (320)
131 2vc6_A MOSA, dihydrodipicolina 28.2 3E+02 0.01 25.0 9.7 78 186-266 21-102 (292)
132 3gnn_A Nicotinate-nucleotide p 28.2 1.7E+02 0.0058 27.2 7.9 60 191-266 221-281 (298)
133 2x7v_A Probable endonuclease 4 28.2 3E+02 0.01 24.0 10.7 84 181-266 84-178 (287)
134 3m5v_A DHDPS, dihydrodipicolin 28.2 3.5E+02 0.012 24.7 10.6 79 186-266 28-110 (301)
135 3dz1_A Dihydrodipicolinate syn 28.0 2.4E+02 0.0083 26.0 9.1 77 186-266 29-109 (313)
136 3si9_A DHDPS, dihydrodipicolin 27.7 3.3E+02 0.011 25.1 10.0 78 186-266 43-124 (315)
137 1rqb_A Transcarboxylase 5S sub 27.5 2.8E+02 0.0096 28.0 9.9 71 188-264 177-250 (539)
138 1wvq_A Hypothetical protein PA 27.3 24 0.00084 29.7 1.6 27 286-312 131-158 (167)
139 1o5k_A DHDPS, dihydrodipicolin 27.1 3.4E+02 0.012 24.8 9.9 78 186-266 33-114 (306)
140 1j6o_A TATD-related deoxyribon 27.1 2.3E+02 0.0077 25.1 8.5 25 308-332 195-219 (268)
141 1f6k_A N-acetylneuraminate lya 26.9 3.6E+02 0.012 24.5 10.2 78 186-266 24-106 (293)
142 2v9d_A YAGE; dihydrodipicolini 26.8 3E+02 0.01 25.8 9.6 78 186-266 52-133 (343)
143 3nso_A Protein S100-A3; EF-han 26.8 1E+02 0.0035 23.5 5.2 26 15-40 10-40 (101)
144 3o1n_A 3-dehydroquinate dehydr 26.6 3.6E+02 0.012 24.4 10.4 124 192-327 58-200 (276)
145 2xf7_A GP23.1; viral protein; 26.5 70 0.0024 21.0 3.4 21 15-38 22-42 (51)
146 3qfe_A Putative dihydrodipicol 26.5 3.1E+02 0.011 25.3 9.6 78 186-266 32-113 (318)
147 4dpp_A DHDPS 2, dihydrodipicol 26.5 2.3E+02 0.0077 27.1 8.6 78 186-266 80-161 (360)
148 3guw_A Uncharacterized protein 26.4 1.1E+02 0.0036 27.7 6.1 78 236-331 123-211 (261)
149 3ble_A Citramalate synthase fr 26.2 1.8E+02 0.0061 27.3 7.8 71 187-264 170-243 (337)
150 1qpo_A Quinolinate acid phosph 26.1 1.4E+02 0.0049 27.4 7.0 63 191-266 206-269 (284)
151 4dnh_A Uncharacterized protein 25.7 95 0.0033 29.5 5.5 61 180-244 131-191 (396)
152 2gou_A Oxidoreductase, FMN-bin 25.7 1.9E+02 0.0066 27.3 8.1 31 176-207 152-182 (365)
153 1a4p_A S100A10; S100 family, E 25.6 82 0.0028 23.4 4.4 26 15-40 9-36 (96)
154 3eeg_A 2-isopropylmalate synth 25.3 4.1E+02 0.014 24.6 11.8 126 190-332 32-178 (325)
155 2rfg_A Dihydrodipicolinate syn 25.2 3.1E+02 0.011 25.0 9.2 78 186-266 21-102 (297)
156 1fvp_A Flavoprotein 390, FP390 25.1 1.1E+02 0.0037 26.4 5.8 45 299-346 173-218 (231)
157 1h8b_A ACT-EF34, alpha-actinin 24.9 93 0.0032 22.4 4.4 26 13-38 8-35 (75)
158 3a1g_A RNA-directed RNA polyme 24.5 63 0.0021 23.6 3.2 25 15-39 44-68 (80)
159 2rag_A Dipeptidase; aminohydro 24.4 4.9E+02 0.017 25.2 11.5 30 300-329 333-362 (417)
160 2jvf_A De novo protein M7; tet 24.2 79 0.0027 22.9 3.7 24 183-206 30-53 (96)
161 3e96_A Dihydrodipicolinate syn 23.3 3E+02 0.01 25.4 8.7 77 186-266 33-113 (316)
162 2vc7_A Aryldialkylphosphatase; 23.1 4E+02 0.014 23.7 9.7 90 237-331 165-260 (314)
163 1ydn_A Hydroxymethylglutaryl-C 23.0 2.1E+02 0.0073 25.9 7.6 67 191-265 160-230 (295)
164 1xwy_A DNAse TATD, deoxyribonu 22.9 3.1E+02 0.011 23.7 8.6 24 308-331 188-211 (264)
165 3h5d_A DHDPS, dihydrodipicolin 22.6 3.2E+02 0.011 25.1 8.8 78 186-266 28-110 (311)
166 1rlh_A Conserved hypothetical 22.5 26 0.00089 29.6 1.0 24 286-309 138-162 (173)
167 1qop_A Tryptophan synthase alp 22.4 4.1E+02 0.014 23.6 14.3 23 188-210 33-55 (268)
168 3rmj_A 2-isopropylmalate synth 22.3 1.9E+02 0.0064 27.6 7.2 114 189-316 160-287 (370)
169 3obe_A Sugar phosphate isomera 21.9 1.7E+02 0.0058 26.5 6.7 62 183-246 111-173 (305)
170 2cw6_A Hydroxymethylglutaryl-C 21.6 4.5E+02 0.015 23.8 12.6 111 189-331 83-214 (298)
171 3ewb_X 2-isopropylmalate synth 21.4 3.2E+02 0.011 25.0 8.4 75 186-264 150-227 (293)
172 2r91_A 2-keto-3-deoxy-(6-phosp 21.2 4.5E+02 0.016 23.6 9.9 75 186-266 19-97 (286)
173 1qap_A Quinolinic acid phospho 20.5 2.8E+02 0.0096 25.5 7.8 59 191-265 220-279 (296)
174 3l5a_A NADH/flavin oxidoreduct 20.4 3.9E+02 0.013 25.8 9.2 90 176-266 161-285 (419)
175 2xio_A Putative deoxyribonucle 20.3 2.6E+02 0.0088 25.3 7.6 81 236-331 140-223 (301)
176 1tx9_A GPD, scaffolding protei 20.3 62 0.0021 25.7 2.6 23 5-27 64-86 (151)
177 3iwp_A Copper homeostasis prot 20.2 5.1E+02 0.017 23.8 13.1 117 195-327 55-188 (287)
178 3ur8_A Glucan endo-1,3-beta-D- 20.1 1.6E+02 0.0055 27.7 6.0 71 242-317 4-81 (323)
No 1
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=100.00 E-value=6.7e-78 Score=636.87 Aligned_cols=349 Identities=46% Similarity=0.827 Sum_probs=302.7
Q ss_pred CceeeccCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCCC
Q 016581 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPP 80 (387)
Q Consensus 1 ~~tt~vG~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~~ 80 (387)
|+||++||||+|+.||||+|+|+||+|++|.++|.++.++.+.+.|+.|+++|||.|++|+|||||+|||++.+||.||+
T Consensus 24 ~~~~~lg~prig~~relk~a~e~yw~g~~~~~eL~~~~~~lr~~~w~~q~~aGid~ip~~dFs~YD~vLd~~~~~g~ip~ 103 (789)
T 3ppg_A 24 VQSSVLGFPRIGGQRELKKITEAYWSGKATVEELLAKGKELREHNWKLQQKAGVDIIPSNDFSYYDQVLDLSLLFNAIPE 103 (789)
T ss_dssp CCEECSCCCCSCTTCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHTCSBCEESCCCSSCHHHHHHHHTTCCCG
T ss_pred HHHhhcCCCCcCCccHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEecCCCcchHHHHHHHHHhCCCch
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcchhhhhhhhhcCC----------ccccccccccccCCcceecceeccCcccccC---CcccHHHHHHHHhC
Q 016581 81 RFNWNGGEIGFDVYFSMARGNA----------SVLAMEMTKWFDTNYHFIVPELGPDVKFSYA---SHKAVTEYKEAKGH 147 (387)
Q Consensus 81 r~~~~~~~~~~~~~F~~a~g~~----------~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~---~~~~~~~~~~ak~~ 147 (387)
||++.+ ..++++||+|+||.. ++++++|||||||||||+||++.+.+.|++. .++++++|++|+++
T Consensus 104 r~~~~~-~~~l~~yf~~arg~~~~~~~~~~~~~~~a~eMtKWFdTNYHYiVPE~~~~~~f~l~~~~~~k~~~e~~eAk~~ 182 (789)
T 3ppg_A 104 RYTKFD-LAPIDVLFAMGRGLQAAATATQAAVDVTALEMVKWFDSNYHYVRPTFSHSTEFKLNTAAGIKPVDEFNEAKAL 182 (789)
T ss_dssp GGGSSC-CCHHHHHHHHHHCEEECC-----CEEECCCCEEECTTSSCEEECCEECTTCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred hhcccC-CCcHHHHHHHhcCCccccccccccCCcccccccccccCCCCeeceEECCCCCeeeccccchhHHHHHHHHHHc
Confidence 998543 357899999999964 6778999999999999999999999999998 78999999999999
Q ss_pred CCCCCceeecHHHHHHhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHH--------
Q 016581 148 GVETVPVLIGPVSYLLLSKPAWGVEKTFSVLSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKL-------- 219 (387)
Q Consensus 148 g~~~k~~l~GP~tl~~~~~~~~~~~~~~~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~-------- 219 (387)
|+.+||+|+||+||+++++...+- ..+++.+++++|+++|.++++.|.++||.|||||||+|+.++++++.
T Consensus 183 G~~~kpVl~GPvT~L~L~k~~~~~-~~~~~~~lL~~Ll~~Y~~~l~~L~~~G~~wVQiDEP~Lv~dl~~~~~~~~~~aY~ 261 (789)
T 3ppg_A 183 GVQTRPVILGPVSYLYLGKADKDS-LDLEPISLLPKILPVYKELLQKLKEAGAEQVQIDEPVLVLDLPEAVQSKFKEAYD 261 (789)
T ss_dssp TCCCEEEEECHHHHHHTCEECGGG-TTCCGGGGHHHHHHHHHHHHHHHHHHTCCEEEEECGGGGSCCCHHHHTHHHHHHH
T ss_pred CCCCCceeecHHHHHHHhcccccc-ccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEeeCCeeecCCCHHHHHHHHHHHH
Confidence 999999999999999998732210 12477899999999999999999999999999999999999877532
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 262 ~L~~~~~~kill~TYFg~~~~~l~~l~~lpV~gl~lDlv~~~~~l~~v~~~~~~~k~L~aGvVdGRNiWr~dl~~~l~~l 341 (789)
T 3ppg_A 262 ALVGADVPELILTTYFGDVRPNLKAIENLPVAGFHFDFVRVPEQLDEVASILKDGQTLSAGVVDGRNIWKTDFAKASAVV 341 (789)
T ss_dssp HHCSTTSCEEEEECCSSCCGGGHHHHTTCCCSEEEEETTTCGGGHHHHHHTCCTTCEEEEEEECSSCCBCCCHHHHHHHH
T ss_pred HHhhCCCCCEEEECCCCCHHHHHHHHHcCCCcEEEEEccCCcchHHHHHhhcCCCCeEEEEEecCCccccCCHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 342 ~~l~~~lg~~~l~vspScSLlHvP~~l~~e~~l~~~~~~~lafa~~k~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (789)
T 3ppg_A 342 QKAIEKVGKDKVVVATSSSLLHTPVDLESETKLDAVIKDWFSFATQKLDEVVVIAKNVSGEDVSKQLEANAASIKARSES 421 (789)
T ss_dssp HHHHHHHCGGGEEEEESSCGGGSCSCGGGCSSSCHHHHTTBCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCeEEEeCCCCCCCCCcccccccCCCHHHHhhcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhcc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 422 ~~~~~~~v~~r~~~~~~~~~~r~~~~~~r~~~q~~~~~lp~~ptt~VGSfPRp~~L~~aR~~~~~G~is~~el~~~~~~a 501 (789)
T 3ppg_A 422 SITNDPKVQERLTTINEALATRKAAFPERLTEQKAKYNLPLFPTTTIGSFPQTKDIRINRNKFAKGQITAEEYEAFINKE 501 (789)
T ss_dssp SSSCCHHHHHHHHTCCTGGGSCSSCHHHHHHHHHHHHCCCSSCBBCCSCCCCCHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHhCCHhhhccCCchHHHHHHHHHhcCCCCceeccccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 502 I~~vV~~Qe~~GLdvvtDGE~~R~d~v~~F~e~L~G~~~~~~g~vq~~g~r~~~~p~i~G~V~~~~p~~v~~~~~~qs~t 581 (789)
T 3ppg_A 502 IETVVRFQEEIGLDVLVHGEPERNDMVQYFGEQLNGFAFTTNGWVQSYGSRYVRPPIIVGDVSRPKAMTVKESVYAQSIT 581 (789)
T ss_dssp HHHHHHHHHHHTCSBBCCCCTTCSCTTHHHHTTSEEEECCSSCCEEEETTEEECCCEEEEEEECCSCSSHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCeeeCCCccchhHHHHHHHhCCCeeEecCcceEecCCccccCCeeeccCCCCCCCcHHHHHHHHhhc
Confidence
Q ss_pred ---------------------------------------------------------------------------HHHHH
Q 016581 220 ---------------------------------------------------------------------------QAFIH 224 (387)
Q Consensus 220 ---------------------------------------------------------------------------~~a~~ 224 (387)
+++++
T Consensus 582 ~~pvK~~L~gP~ti~~~s~~r~~~~~ee~~~dlA~A~r~Ei~~L~~AG~r~IQiDEPal~e~l~~r~g~d~~~~l~~av~ 661 (789)
T 3ppg_A 582 SKPMKGMLTGPVTILRWSFPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQVDEPAIREGLPLRAGKERSDYLNWAAQ 661 (789)
T ss_dssp SSCBEEEEECHHHHHHTSBCCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTTGGGSCSSSSHHHHHHHHHHHH
T ss_pred cCCCceeccchHhHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhcccccccCCHHHHHHHHHH
Confidence 03799
Q ss_pred HHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe-cCCCChhhhHHhhhccCCCcccccccccCCCCCCCCH
Q 016581 225 SFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE-NSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPST 303 (387)
Q Consensus 225 ~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE-~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~ 303 (387)
++|.+++++|++++|++|+|||||.. +.|.++++|+|+|| ++|+++++|+.+++ +++.|++||||++++.+|++
T Consensus 662 a~n~a~~g~p~d~~I~tHiC~Gnf~~--~~I~~l~aD~islE~~~Rs~~e~L~~~~~---~~k~V~lGVvds~sp~vEs~ 736 (789)
T 3ppg_A 662 SFRVATSGVENSTQIHSHFCYSDLDP--NHIKALDADVVSIEFSKKDDPNYIQEFSE---YPNHIGLGLFDIHSPRIPSK 736 (789)
T ss_dssp HHHHHHSSSCTTSEEEEECC---CCH--HHHHHHCCSEEEEC---------CGGGGG---CCSEEEEC-------CCCCH
T ss_pred HHHHHHhcCCCCcEEEEeccCCCCCh--hHHHhCCCCEEEEecCCCcchHHHHHHHh---cCCeEEeeeecCCCCCCCCH
Confidence 99999999999999999999999987 89999999999999 77878899988876 36799999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCcEEEcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHh
Q 016581 304 EEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQL 356 (387)
Q Consensus 304 e~v~~ri~~a~~~v~~~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~~~r~~l 356 (387)
|+|++||+++++++|++++||||||||++++++++++||++|+++|+.+|++|
T Consensus 737 EeV~~rI~~a~~~v~~erL~lsPdCGl~t~~~~~a~akL~~mveaAk~lR~~~ 789 (789)
T 3ppg_A 737 QEFVSRIEEILKVYPASKFWVNPDCGLKTRGWPEVKESLTNMVEAAKEFRAKY 789 (789)
T ss_dssp HHHHHHHHHHTTTSCGGGEEECCSCC---CCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999985
No 2
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=100.00 E-value=3.3e-70 Score=585.53 Aligned_cols=348 Identities=57% Similarity=0.903 Sum_probs=306.1
Q ss_pred CceeeccCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCCC
Q 016581 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPP 80 (387)
Q Consensus 1 ~~tt~vG~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~~ 80 (387)
|+|+++||||||+.||||+|+|+||+|+||.++|+++.+++++++|+.|+++|||+||||||+|||||+|++++||+||+
T Consensus 1 ~~~~~~g~PR~g~~reLk~a~e~~~~g~i~~~~L~~~~~~~~~~~~~~Q~~aGld~i~~gdfs~yd~vld~~~~l~~ip~ 80 (765)
T 1u1j_A 1 MASHIVGYPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPP 80 (765)
T ss_dssp -CBBCSCCCCSCTTCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHTTCSBCEESCCCSSCHHHHHHHHTTCCCG
T ss_pred CCcceecCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEeccCCcccchHHHHHHHHhCCcCc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcchhhhhhhhhcCCccccccccccccCCcceecceeccCcccccCCcccHHHHHHHHhCCCCCCceeecHHH
Q 016581 81 RFNWNGGEIGFDVYFSMARGNASVLAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGHGVETVPVLIGPVS 160 (387)
Q Consensus 81 r~~~~~~~~~~~~~F~~a~g~~~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~~~~~~~~~~~ak~~g~~~k~~l~GP~t 160 (387)
||....|..+++.||+++||..++++++|||||||||||++|++++++.|++..++++++|++++++|+.+|++|+||+|
T Consensus 81 r~~~~~~~~~~~~yf~~arG~~~~~a~emtkwfdtNyhy~vPe~~~~~~~~~~~~~~l~~~~~ak~~g~~~K~~l~GP~T 160 (765)
T 1u1j_A 81 RYGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVS 160 (765)
T ss_dssp GGCCCSSSCCHHHHHHHHHCCSSSCCCCEEECTTSSCEEECCEECTTCCCCCCCCHHHHHHHHHHHTTCCCEEEEECHHH
T ss_pred ceeccccCccHHHHHHHhCCCccccchhhheecccCcCceeeEEcCCcccccCCcchHHHHHHHHhcCCCceEEECCHHH
Confidence 98643333458899999999535778999999999999999999999999987889999999999999889999999999
Q ss_pred HHHhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCC----CCC
Q 016581 161 YLLLSKPAWGVEKTFSVLSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGI----QDT 236 (387)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~----~~~ 236 (387)
|+++++..+..+..+++.+++++|+++|++++++|.++||+|||||||.|+.++++++ .++++.+.+++ + +
T Consensus 161 ll~l~k~~~~~~~~~~~~~ll~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~----~~~~~~a~~~l~~~~~-~ 235 (765)
T 1u1j_A 161 YLLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQK----LQAFTGAYAELESTLS-G 235 (765)
T ss_dssp HHHTCEECTTCCTTCCGGGGHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHH----HHHHHHHHHHSTTTTC-S
T ss_pred HHHhhhcccccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHH----HHHHHHHHHHHHhhcC-C
Confidence 9977652222111136789999999999999999999999999999999999886644 45555555554 4 6
Q ss_pred ceEEEEecCCCch-hHHHHHHcCC-CCEEEEecCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHH
Q 016581 237 TQIHTHMCYSNFN-DIIHSIIDMD-ADVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMR 314 (387)
Q Consensus 237 ~~v~lH~C~gn~~-~i~~~l~~l~-vD~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~ 314 (387)
..+.+|+|+|++. ++++.|.+++ +|+|++|..+.. +.++.+.+.++.++.|++||||+++.+.++++++.+++++++
T Consensus 236 ~~i~lhtc~G~~~~~~~~~l~~l~~vd~l~lD~v~~~-~~l~~l~~~l~~~k~L~lGvVdgrni~~~d~e~v~~~l~~~~ 314 (765)
T 1u1j_A 236 LNVLVETYFADIPAEAYKTLTSLKGVTAFGFDLVRGT-KTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALE 314 (765)
T ss_dssp SEEEEECCSSCCCHHHHHHHTTCTTCCEEEEESSSCT-THHHHHHHCCCSSCEEEEEEECSSSCBCCCHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCcchHHHHHHHcCCCCcEEEEEecCCc-ccHHHHHHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHH
Confidence 7899999999999 8999999999 999999965543 344444433444789999999999999999999999999999
Q ss_pred hhcCCCcEEEcCCCCCC----------CCChhhH------HHHHHHHHHHHHHHHH
Q 016581 315 TVLETNILWVNPDCGLK----------TRKYTEV------KPALSNMVAATKLLRT 354 (387)
Q Consensus 315 ~~v~~~~l~isPdCGl~----------~~~~~~a------~~kL~~lv~~a~~~r~ 354 (387)
+++|.++++|+|+|||. .++++++ ++||+.+++.++.+++
T Consensus 315 ~~lg~~~l~lspsCgL~hvP~~~~~e~~l~~~~~~~~~fa~~Kl~el~~la~~l~~ 370 (765)
T 1u1j_A 315 GIVGKDKLVVSTSCSLLHTAVDLINETKLDDEIKSWMAFAAQKVVEVNALAKALAG 370 (765)
T ss_dssp HHCCSSCEEEEESSCGGGSCSCGGGCCSSCHHHHTTBCCHHHHHHHHHHHHHHHHT
T ss_pred HhcCCCcEEEcCCCCccCCccccccccCCCHHHHhhhHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999 7788888 9999999999999885
No 3
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=100.00 E-value=8.8e-71 Score=588.27 Aligned_cols=346 Identities=44% Similarity=0.761 Sum_probs=300.5
Q ss_pred CceeeccCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCCC
Q 016581 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPP 80 (387)
Q Consensus 1 ~~tt~vG~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~~ 80 (387)
++++++||||||++||||+|+|+||+|+||.++|+++.+++++.+|+.|+++|||+||+|+|+|||+|||++.+||.||+
T Consensus 4 ~~~~~lgyPRig~~relk~a~e~yw~g~i~~~~L~~~~~~~r~~~~~~q~~aGid~i~~gdfs~yD~vl~~~~~~~~~p~ 83 (755)
T 2nq5_A 4 TKVSSLGYPRLGENREWKKLIEAYWAGKVSKNDLFAGAKELRLDFLKKQLNAGLDLIPVGDFSLYDHILDLSVQFNIIPK 83 (755)
T ss_dssp CEEBCSCCCSSCTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHTTCSBEEESCCCSSCHHHHHHHHTTCCCG
T ss_pred cccceecCCCCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccCCccchHHHHHHHHHhCCCch
Confidence 36778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcchhhhhhhhhcC-CccccccccccccCCcceecceeccCcccccCCcccHHHHHHHH-hCCCCCCceeecH
Q 016581 81 RFNWNGGEIGFDVYFSMARGN-ASVLAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAK-GHGVETVPVLIGP 158 (387)
Q Consensus 81 r~~~~~~~~~~~~~F~~a~g~-~~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~~~~~~~~~~~ak-~~g~~~k~~l~GP 158 (387)
||+.. ..++++||+|+||. .++ +++|||||||||||++|++.+ ++|++..++++++|++|+ +.|+++|++|+||
T Consensus 84 r~~~~--~~~l~~yFa~aRG~~~~~-a~emtkwfdtNyhY~vPe~~~-~~~~~~~~~~l~~~~eA~~~~g~~vK~vl~GP 159 (755)
T 2nq5_A 84 RFAKE--PIDIDLYFAIARGNKENV-ASSMKKWFNTNYHYIVPEWSK-QRPKLNNNRLLDLYLEAREVVGDKAKPVITGP 159 (755)
T ss_dssp GGTTS--CSSHHHHHHHHHCCSSSC-CCCEEECTTSSCEEECCBCCS-CCCCCCCCHHHHHHHHHHHHHGGGEEEEEECH
T ss_pred hhccc--cccHHHHHHHHhCCCCCC-cccceeeccCCCceeeeeeeC-ceeeecCchHHHHHHHHHHhcCCCcEEEEccH
Confidence 99643 24599999999995 355 899999999999999999999 888888889999999999 5688999999999
Q ss_pred HHHHHhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHH-------------------
Q 016581 159 VSYLLLSKPAWGVEKTFSVLSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKL------------------- 219 (387)
Q Consensus 159 ~tl~~~~~~~~~~~~~~~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~------------------- 219 (387)
+||+++++. . + +.++++++|+++|++++++|.++||+|||||||+|+.++.+++.
T Consensus 160 ~Tla~l~k~-~---~--~~~dll~~L~~~y~~~l~~L~~~Ga~~VQiDEP~L~~dl~~~~~~~~~~ay~~l~~~~~~~~v 233 (755)
T 2nq5_A 160 ITYVALSTG-V---E--DFTAAVKSLLPLYKQVFTELVKAGASYIQVDEPIFVTDEGKDYLQAAKAVYAYFAKEVPDAKF 233 (755)
T ss_dssp HHHHHTCBS-C---S--CHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSSGGGGGHHHHHHHHHHHHHHSTTCEE
T ss_pred HHHHHHhcC-C---c--HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccCCCCHHHHHHHHHHHHHHHhcccCCcE
Confidence 999998763 1 1 35699999999999999999999999999999999876543210
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 234 ~lhtyfG~~~~~~~l~~l~vd~l~lD~v~~~~~~l~~l~~~~~~~k~L~~GvVdgrniw~~d~e~v~~~l~~~~~~~~~l 313 (755)
T 2nq5_A 234 IFQTYFEGLIDSQVLSQLPVDAFGLDFVYGLEENLEAIKTGAFKGKEIFAGVIDGRNIWSSDFVKTSALLETIEEQSAAL 313 (755)
T ss_dssp EEECCSSCCTTHHHHTTSSCSEEEEESSSSHHHHHHHHHTTTTTTSEEEEEEECTTSCBCCCHHHHHHHHHHHHHTSSEE
T ss_pred EEEEeCCChHHHHHHHhCCCCEEEEEecCCChhhHHHHHHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHHhhcCCE
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 314 ~vsPsCsL~h~P~~l~~e~~~~~~~~~~~~fa~~k~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (755)
T 2nq5_A 314 TIQPSCSLLHVPVTTKNETDLDPVLRNGLAFADEKLTEVKRLAEHLDGREDPAYDLHIAHFDALQAADFRNVKLEDLSRV 393 (755)
T ss_dssp EEEESSCGGGSCSCSTTCTTSCHHHHTTBCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTCGGGSCCCCCGGGS
T ss_pred EEcCCCCcCCCCHHHhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccCcccCHHHHhCChh
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 394 ~~~r~~~~~~r~~~q~~~~~l~~~~tt~VGSfprp~~l~~ar~~~~~g~i~~~~l~~~~~~~i~~~V~~Q~~~Gldvvtd 473 (755)
T 2nq5_A 394 ATKRPSDFAKRRDIQQEKLHLPLLPTTTIGSFPQSREIRRTRLAWKRGDISDAEYKQFIQAEIERWIRIQEDLDLDVLVH 473 (755)
T ss_dssp CSSCSSCHHHHHHHHHHHHCCCSSCBBCCSBCCC-----------------CHHHHHHHHHHHHHHHHHHHHHTCSBBCC
T ss_pred hcccCCchHHHHHHHHHhcCCCCcceeeeCCCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 474 GE~~R~d~v~~F~~~l~G~~~~~~g~~~~~~~~~~~~p~i~G~i~~~~p~~ve~~~~l~~~t~~pvK~~l~GP~Tl~~~~ 553 (755)
T 2nq5_A 474 GEFERVDMVEFFGQKLAGFTTTKFGWVQSYGSRAVKPPIIYGDVQHLEPITVEETVYAQSLTDRPVKGMLTGPITITNWS 553 (755)
T ss_dssp BCTTCSCTTHHHHTTEEEEECCSSCCEEEETTEEECCCEEEEEEEECSCSSHHHHHHHHHTCSSCBEEEEECHHHHHHHS
T ss_pred cccccccHHHHHHHhCCCcccccCCccccccccCCCCCEecCCccCCCCCHHHHHHHHHHhcCCCeEEEecCHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------HHHHHHHHHHHcCCCCCceEEEEe
Q 016581 220 --------------------------------------------------------QAFIHSFRITNCGIQDTTQIHTHM 243 (387)
Q Consensus 220 --------------------------------------------------------~~a~~~~~~~~~~~~~~~~v~lH~ 243 (387)
+++++++|.++++++.++++++|+
T Consensus 554 ~~r~~~~~~el~~~lA~a~~~ei~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~l~~~~~~v~~~~~i~~Hi 633 (755)
T 2nq5_A 554 FERTDIPRDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHM 633 (755)
T ss_dssp BCCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSCTTSEEEEEE
T ss_pred hccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEe
Confidence 137899999999999889999999
Q ss_pred cCCCchhHHHHHHcCCCCEEEEecCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEE
Q 016581 244 CYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILW 323 (387)
Q Consensus 244 C~gn~~~i~~~l~~l~vD~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~ 323 (387)
|||||+++++.|.++++|+|+||.+++++++|+.+.+ .++++.|++||||++++.+|++|+|++||+++++++|++++|
T Consensus 634 C~G~~~~i~~~L~~~~aD~islE~~rsd~e~L~~~~~-~~~~~~v~lGvvd~~s~~ve~~eeV~~ri~~a~~~v~~e~l~ 712 (755)
T 2nq5_A 634 CYSKFDEIIDAIRALDADVISIETSRSHGDIIESFET-AVYPLGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFW 712 (755)
T ss_dssp CCSCCSTTHHHHHHHCCSEEEC--------------------CEEEEECSCTTSSCCCCHHHHHHHHHGGGGSSCGGGEE
T ss_pred ccCCcHHHHHHHHhCCCCEEEEecCCCCHHHHHHHHh-ccCCCeEEEeeccCccCCCCCHHHHHHHHHHHHHhCCcccEE
Confidence 9999999999999999999999987878999988875 334678999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHhC
Q 016581 324 VNPDCGLKTRKYTEVKPALSNMVAATKLLRTQLT 357 (387)
Q Consensus 324 isPdCGl~~~~~~~a~~kL~~lv~~a~~~r~~l~ 357 (387)
|||||||++++++++++||++|+++|+.+|++++
T Consensus 713 lsPdCGl~t~t~~e~~~kL~~mveaA~~vr~~~~ 746 (755)
T 2nq5_A 713 VNPDCGLKTRQEPETIAALKVLVAATKEVRQKLG 746 (755)
T ss_dssp EECSSCCTTSCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999997
No 4
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=100.00 E-value=1e-69 Score=572.13 Aligned_cols=344 Identities=42% Similarity=0.750 Sum_probs=315.0
Q ss_pred ceeeccCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCCCC
Q 016581 2 ASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPR 81 (387)
Q Consensus 2 ~tt~vG~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~~r 81 (387)
+|+++||||+|+.||||+|+|+||+|++|.++|.++.++.+.+.|+.|++ |||.|+.|+|+|||+|||++.+||.||+|
T Consensus 34 ~~~~~g~prig~~relk~a~e~yw~g~~~~~~l~~~~~~lr~~~~~~q~~-g~~~i~~~dfs~yd~vld~~~~~g~~p~r 112 (766)
T 1t7l_A 34 KAYAFGFPKIGEKREFKKALEDFWKGKITEEQFEEEMNKLRMYMVENYRK-NVDVIPSNELSYYDFVLDTAVMVGAVPER 112 (766)
T ss_dssp EECCCCCCSSCTTCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHH-HCSSCEESCCCSSCHHHHHHHHTTCCCGG
T ss_pred HhhccCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCeeccCCCcchhHHHhHHHHhCCCchh
Confidence 57789999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCcchhhhhhhhhcCCccccccccccccCCcceecceeccCcccccCCcccHHHHHHHHhCCCCCCceeecHHHH
Q 016581 82 FNWNGGEIGFDVYFSMARGNASVLAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGHGVETVPVLIGPVSY 161 (387)
Q Consensus 82 ~~~~~~~~~~~~~F~~a~g~~~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~~~~~~~~~~~ak~~g~~~k~~l~GP~tl 161 (387)
|... .++++||+||||. ++++|||||||||||+||++. .+.|++..+++++++++|+++|+.+||+|+||+||
T Consensus 113 ~~~~---~~l~~yf~~arg~---~a~em~kwf~tnyhy~vpe~~-~~~f~~~~~~~~~~~~ea~~~g~~~~pvl~gp~t~ 185 (766)
T 1t7l_A 113 FGEY---RGLSTYFDMARGG---KALEMTKFFNTNYHYLVPEIE-TEEFYLLENKPLEDYLFFKSKGIETAPWVIGPFTF 185 (766)
T ss_dssp GCSC---CSHHHHHHHHSST---TCCEEEECTTSSCEEEECBCC-CSCCCCSCCHHHHHHHHHHTTTCCCEEEEECHHHH
T ss_pred hccc---cchHHHHHHHcCC---cchhhhhhhcCCCCeEeeeec-CceeccCcchHHHHHHHHHhcCCCCeeEEEChHHH
Confidence 9743 2389999999994 789999999999999999999 88899998999999999999999999999999999
Q ss_pred HHhcCCCCCc---cCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHH-------------------
Q 016581 162 LLLSKPAWGV---EKTFSVLSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKL------------------- 219 (387)
Q Consensus 162 ~~~~~~~~~~---~~~~~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~------------------- 219 (387)
+++++. .+| ... +.++++++|+++|.+.+++|.++||.|||||||+|+.+++.++.
T Consensus 186 l~l~k~-~~~~~~~~~-~~~~~l~~l~~~y~~~l~~l~~~g~~~vq~dep~l~~d~~~~~~~~~~~~y~~l~~~~~~~~t 263 (766)
T 1t7l_A 186 LYLSKR-NGEWIRRPN-QMEKLLESLVSVYKEVFEKLVENGCKEILVNEPAFVCDLEKAHWDLILNVYRELSEFPLTVFT 263 (766)
T ss_dssp HHTCEE-TTEECCSHH-HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEECGGGGSCCBHHHHHHHHHHHHTTTTSCEEEEC
T ss_pred HHHhcc-CCccccccc-hHHHHHHHHHHHHHHHHHHHHHCCCCEEEecCCeeecCCCHHHHHHHHHHHHHhcCCcEEEEC
Confidence 999873 232 100 12389999999999999999999999999999999999887642
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 264 yf~~~~~~~~~~~l~v~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~Gvvdgrniw~~d~~~~~~~~~~~~~~~~~~s~sl 343 (766)
T 1t7l_A 264 YYDSVSDYEACVSLPVKRLHFDFVSNEENLKNLEKHGFPEDKKLVAGVINGRQPWKVDLRKVASLVEKLGASAISNSCPL 343 (766)
T ss_dssp CSSCCSCHHHHHTSSCSEEEEECSSCSHHHHHHHHHCCCTTSEEEEEEECSSCCBCCCHHHHHHHHHHHTCSEEEESSCG
T ss_pred CcCCHHHHHHHHcCCCcEEEEEecCCHHHHHHHHhccCCCCceEEEEEecCcchhhcCHHHHHHHHHHhheEEEECCcCC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 344 lh~p~~~~~e~~l~~~~~~~lafa~~k~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~~~~~~~~~r~~~~~~r 423 (766)
T 1t7l_A 344 FHLPVTLELENNLPGGLKEKLAFAKEKLEELKMLKDFLEGKTFDLPNVSFEDFAVDLQAVERVRNLPEDSFRREKEYTER 423 (766)
T ss_dssp GGSCSCSTTCCSSSTTTGGGBCCHHHHHHHHHHHHHHHTTSCCCCCCCCCTTTTCCHHHHHHHHTCCGGGTSCSSCHHHH
T ss_pred eeccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHhhcCHHHHHHHHhCCHhhcccCCchHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 424 ~~~q~~~~~lp~~pTt~IGSfPrp~ELK~Are~y~~G~Is~eeL~~~~~~~i~~~V~~QeeaGLDvItdGEFsR~D~Vld 503 (766)
T 1t7l_A 424 DRIQRERLNLPLFPTTTIGSFPQTPEVRKMRSKYRKGEISKEEYEAFIKEQIKKAIELQEEIGLDVLVHGEFERTDMVEF 503 (766)
T ss_dssp HHHHHHHHCCCSSCBCCCSCCCCCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHTCSSBCCCCTTCSSHHHH
T ss_pred HHHHHHhcCCCCcceeeeCcCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCccCCCCcchhhHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 016581 220 -------------------------------------------------------------------------------- 219 (387)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (387)
T Consensus 504 f~~~L~Gi~~~~~g~~~~~~~~~~~~pi~~G~i~ra~pMtlde~~~Aksl~~~pvK~~LtGPvTlL~ls~~r~d~~r~el 583 (766)
T 1t7l_A 504 FAEKLNGIATTQNGWVLSYGSRCYRPPIIYGTVTRPEPMTLKEITYAQSLTEKPVKGMLTGPVTIMSWSYYREDIPEREI 583 (766)
T ss_dssp HHTTSEEEECCSSCCEEEETTEEECCCEEEEEEECCSCSSHHHHHHHHHTCSSCBEEEEECHHHHHHTSEECSSSCHHHH
T ss_pred HHHHhCCccccccccccccccccccCceeecCCccCCcChHHHHHHHHHhcCCCeEEEEeCHHHHHHHhhccCCCCHHHH
Confidence
Q ss_pred ---------------------------------------------HHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHH
Q 016581 220 ---------------------------------------------QAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHS 254 (387)
Q Consensus 220 ---------------------------------------------~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~ 254 (387)
+.+++++|.+ ++++.+++|++|+|||++.++++.
T Consensus 584 l~dLA~ayreeI~~L~~AGa~~IQIDEPaL~~~L~~~~~d~~~~l~~a~~aln~a-~gv~~~~~I~lH~C~G~~~di~~~ 662 (766)
T 1t7l_A 584 AYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEY 662 (766)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECTHHHHTSCSSGGGHHHHHHHHHHHHHHH-TCCCTTSEEEEECCCSCCTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccCCCcchhHHHHHHHHHHHHHHh-hcCCCCceEEEEEecCchHHHHHH
Confidence 0367778888 899888899999999999999999
Q ss_pred HHcCCCCEEEEecCCCChhhhHHhhhcc-CCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCCC
Q 016581 255 IIDMDADVITIENSRSNENLLSVFREGV-QYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTR 333 (387)
Q Consensus 255 l~~l~vD~i~lE~~r~~~e~L~~~~~~~-~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~~ 333 (387)
|.++++|+|+||.+|++.+++..+++ + ++++.|++||||++|+++|++|+++++|+++++++|.+++||||||||+++
T Consensus 663 L~~l~VD~IsLE~~Rs~~elL~~l~~-~p~~~k~L~lGVVD~rn~~ved~EeI~~rI~~a~~~Vg~erL~VsPdCGL~~~ 741 (766)
T 1t7l_A 663 IHQLEFDVISIEASRSKGEIISAFEN-FKGWIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKELIWINPDCGLKTR 741 (766)
T ss_dssp HTTSCCSEEEEECTTTTTGGGHHHHT-STTCCSEEEEECSCTTSCSCCCHHHHHHHHHHHTTTSCGGGEEEECSSCCTTS
T ss_pred HHcCCCCEEEEecCCCchhHHHHHHh-ccccCCeEEEEEECCCCCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCCCCCC
Confidence 99999999999988888788888875 3 345799999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhC
Q 016581 334 KYTEVKPALSNMVAATKLLRTQLT 357 (387)
Q Consensus 334 ~~~~a~~kL~~lv~~a~~~r~~l~ 357 (387)
+++++++||++|+++|+++|++++
T Consensus 742 p~~e~~~kLk~mvaaAkevr~e~~ 765 (766)
T 1t7l_A 742 NWDEVIPSLRNMVALAKEMREKFE 765 (766)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999876
No 5
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=100.00 E-value=1.5e-66 Score=512.59 Aligned_cols=318 Identities=20% Similarity=0.249 Sum_probs=280.0
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCC
Q 016581 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (387)
Q Consensus 1 ~~tt~vG-~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~ 79 (387)
++||+|| |||| .+|++|+++|++|+|+.++|+++++++++++|+.|+++|||+||||||+|+|||.||++.++|+.
T Consensus 18 ~ptt~vGSfprp---~~l~~ar~~~~~g~i~~~~l~~~~~~ai~~~V~~Q~~~GldvvtdGE~~R~d~~~~f~~~l~G~~ 94 (357)
T 3rpd_A 18 LPTSTAGSLPKP---LWLAEPETLWSPWKLQGEELITGKHDALRLSLQDQQLAGIDIVSDGEQTRQHFVTTFIEHLNGVD 94 (357)
T ss_dssp SCCCCSSCCCCC---TTTBCTTCSSCCBSCCHHHHHHHHHHHHHHHHHHHHHTTCSSBCCTTTTCSCTTHHHHHTSEEEE
T ss_pred cccceeccCCCC---HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCcchhhHHHHHHHhCCCee
Confidence 4799999 9999 89999999999999999999999999999999999999999999999999999999999887761
Q ss_pred CCccCCCCCcchhhhhhhhhcCCccccccccccccCCcceecceeccCcccccCCcccHHHHHHHHhC-CCCCCceeecH
Q 016581 80 PRFNWNGGEIGFDVYFSMARGNASVLAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGH-GVETVPVLIGP 158 (387)
Q Consensus 80 ~r~~~~~~~~~~~~~F~~a~g~~~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~~~~~~~~~~~ak~~-g~~~k~~l~GP 158 (387)
+ ...+...++ ++|+|..|.|+|++.++ +++.++++++++++ +.+.|.+||||
T Consensus 95 --~----------------------~~~~~v~~~-~~~~~~~p~i~G~v~~~--~~~~v~~~~~~~~~t~~~vK~~lpgP 147 (357)
T 3rpd_A 95 --F----------------------SKRKIVKIR-DRYDASVPTVVGPVSRQ--KSVFVEDAKFLRKQTTQPIKWALPGP 147 (357)
T ss_dssp --E----------------------EEEEEEEET-TTEEEEEEEEEEEEECC--SCSSHHHHHHHHHHCSSCBEEEEECH
T ss_pred --e----------------------ccCcccccc-CCceeeCCEEEccCCCC--CCCcHHHHHHHHhhccCCceEEeCCH
Confidence 0 001112334 67788999999987654 67789999999987 66789999999
Q ss_pred HHHHHhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCce
Q 016581 159 VSYLLLSKPAWGVEKTFSVLSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQ 238 (387)
Q Consensus 159 ~tl~~~~~~~~~~~~~~~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~ 238 (387)
+|++.++.. ..|. ++++++.+||.+|++++++|+++||++||||||+|.. ..++..+++++++|.++++++. .
T Consensus 148 ~t~~~~~~~-~~y~---~~~e~~~dlA~a~~~ei~~l~~aG~~~IQiDeP~l~~-~~~~~~~~~v~~~n~~~~~~~~--~ 220 (357)
T 3rpd_A 148 MTMIDTLYD-DHYK---SREKLAWEFAKILNEEAKELEAAGVDIIQFDEPAFNV-FFDEVNDWGIACLERAIEGLKC--E 220 (357)
T ss_dssp HHHHTSSEE-SSSC---CHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECGGGGT-CHHHHHHTHHHHHHHHHTTCCS--E
T ss_pred HHHHHHhhh-ccCC---CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCccccc-cHHHHHHHHHHHHHHHHhCCCC--c
Confidence 999866542 3332 7899999999999999999999999999999999987 3455667899999999999975 5
Q ss_pred EEEEecCC------------------CchhHHHHHHcCCCCEEEEecCCC--ChhhhHHhhhccCCCcccccccccCCCC
Q 016581 239 IHTHMCYS------------------NFNDIIHSIIDMDADVITIENSRS--NENLLSVFREGVQYDAAIGPGVYDIHSP 298 (387)
Q Consensus 239 v~lH~C~g------------------n~~~i~~~l~~l~vD~i~lE~~r~--~~e~L~~~~~~~~~~k~l~lGvvd~~s~ 298 (387)
+++|+||| +|+++++.|.++++|+|+||.+++ ++++++.++ ++.|++||||++++
T Consensus 221 ~~iHiC~G~~~~~n~d~~~t~~~~~g~y~~i~~~l~~~~~D~i~lE~~~~r~~~e~l~~~~-----~k~v~lGvvd~~s~ 295 (357)
T 3rpd_A 221 TAVHICYGYGIKANTDWKKTLGSEWRQYEEVFPKLQKSNIDIISLECHNSHVPMELLELIR-----GKKVMVGAIDVATD 295 (357)
T ss_dssp EEEEECSCCSSHHHHHHHTTSCSCCCGGGGTHHHHHHSSCCEEEECCTTCCCCGGGGGGGT-----TSEEEEECSCTTCS
T ss_pred eEEEEecCCccCCccccccccccccCcHHHHHHHHHhCCCCEEEEEecCCCCChHHHHhcC-----CCEEEeccccCcCC
Confidence 67899996 368899999999999999996554 577776654 47999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHhCCCc
Q 016581 299 RIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQLTVPR 360 (387)
Q Consensus 299 ~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~~~r~~l~~~~ 360 (387)
.+|++|+|++||+++++++|++++||||||||++++++++++||++|+++|+.+|++|+.+|
T Consensus 296 ~ve~~eev~~ri~~a~~~v~~~~l~lsPdCGl~~~~~~~a~~kL~~mv~aa~~~r~~l~~~~ 357 (357)
T 3rpd_A 296 TIETAEEVADTLRKALKFVDADKLYPCTNCGMTPLSHQVTRGKLNALSAGAEIVRKELLALR 357 (357)
T ss_dssp SCCCHHHHHHHHHHHHTTSCGGGEEEECSSCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999998776
No 6
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=100.00 E-value=5.1e-65 Score=506.08 Aligned_cols=323 Identities=17% Similarity=0.219 Sum_probs=266.6
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCC
Q 016581 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (387)
Q Consensus 1 ~~tt~vG-~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~ 79 (387)
++||+|| |||| ++|++|+++|++|+|+.++|+++++++++++|++|+++|||+||||||+|+|||.||++.++|+.
T Consensus 7 ~~tt~vGSfprp---~~l~~ar~~~~~g~i~~~~l~~~~~~~i~~~v~~Q~~~GldvvtdGE~~R~d~~~~f~~~l~G~~ 83 (375)
T 1ypx_A 7 FYADHVGSILRT---KGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVE 83 (375)
T ss_dssp CSBCCCSCCCCC---HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHTCSEECCTTTTC--CCHHHHTTSEEEE
T ss_pred CccceeCcCCCC---HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcchhhHHHHHHHHCCCee
Confidence 3599999 9999 99999999999999999999999999999999999999999999999999999999999998872
Q ss_pred CCccCCCCCcchhhhhhhhhcCCccccccccccccCCcceecceeccCcccccCCcccHHHHHHHHhC-CC-C-CCceee
Q 016581 80 PRFNWNGGEIGFDVYFSMARGNASVLAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGH-GV-E-TVPVLI 156 (387)
Q Consensus 80 ~r~~~~~~~~~~~~~F~~a~g~~~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~~~~~~~~~~~ak~~-g~-~-~k~~l~ 156 (387)
++. +.++.++.+.++.|..|.|+|++.++ +++++++++++++. +. + .|.+||
T Consensus 84 -~~~----------------------~~~~~~f~~~~~~~~~p~i~g~i~~~--~~p~~~~~~~l~~~~~~~~~vK~~l~ 138 (375)
T 1ypx_A 84 -GYD----------------------AAGGIQFSKVQTKSHSVKITGPIDFT--THPFIEDFIFLKEAVGDNHVAKQTIP 138 (375)
T ss_dssp -EC--------------------------------------CEEEEEEEECS--CCTHHHHHHHHHHHHCSSSEECEEEE
T ss_pred -eec----------------------CCCceeecCCCCCccCceecCCCCCC--CCchHHHHHHHHHHhcCCCceEEecC
Confidence 111 01122322333348899999988765 35699999999987 32 4 599999
Q ss_pred cHHHHHHhcCCCC-CccCCCCH-HHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCC--------------hHHHH
Q 016581 157 GPVSYLLLSKPAW-GVEKTFSV-LSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLD--------------SHKLQ 220 (387)
Q Consensus 157 GP~tl~~~~~~~~-~~~~~~~~-~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~--------------~~~~~ 220 (387)
||+|++.++...+ .|+ +. ++++++||.+|++++++|+++||++||||||+|+..+. .+..+
T Consensus 139 gP~tl~~~~~~~~~~Y~---~~~~~l~~~la~a~~~ei~~l~~aG~~~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~ 215 (375)
T 1ypx_A 139 SPAMLHYRGDIEYQPYL---DDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQE 215 (375)
T ss_dssp CTHHHHHHEEECSHHHH---HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECHHHHTTSCC--------CCSTTTHHH
T ss_pred CHHHHHHHHhcchhhcc---ChHHHHHHHHHHHHHHHHHHHHHCCCCEEEecCCchhhhhccchhcccccccCCHHHHHH
Confidence 9999998764322 232 56 89999999999999999999999999999999986542 23457
Q ss_pred HHHHHHHHHHcCCCCCceEEEEecCC----------CchhHHHHHH-cCCCCEEEEe--cCCC-ChhhhHHhhhccCCCc
Q 016581 221 AFIHSFRITNCGIQDTTQIHTHMCYS----------NFNDIIHSII-DMDADVITIE--NSRS-NENLLSVFREGVQYDA 286 (387)
Q Consensus 221 ~a~~~~~~~~~~~~~~~~v~lH~C~g----------n~~~i~~~l~-~l~vD~i~lE--~~r~-~~e~L~~~~~~~~~~k 286 (387)
++++++|.++++++++++|++|+||| +|+++++.|. ++++|+|+|| ..|+ ++++|+.+++ .++
T Consensus 216 ~~v~~~n~~~~~~~~~~~i~~HiC~gn~~s~~~~~g~~~~i~~~l~~~~~~d~i~lE~~~~r~g~~e~L~~~~~---~~~ 292 (375)
T 1ypx_A 216 TYKNLINEAIKHKPADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKYVTR---PDL 292 (375)
T ss_dssp HHHHHHHHHTTTCCTTCEEEEEECCC----------CCSGGGHHHHTTCCCSEEEEECCSCC---CCTTCCCCC---TTC
T ss_pred HHHHHHHHHHhcCCCCCeEEEEEeccccCCccccccchHHHHHHHHhhCCCCEEEEEecCCCCCcHHHHHHhhh---cCC
Confidence 89999999999999889999999998 5678999999 9999999999 5566 6888877654 257
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCC------CCChhhHHHHHHHHHHHHHHHHHHhC
Q 016581 287 AIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLK------TRKYTEVKPALSNMVAATKLLRTQLT 357 (387)
Q Consensus 287 ~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~------~~~~~~a~~kL~~lv~~a~~~r~~l~ 357 (387)
.|++||||++++.+|++|+|++||+++++++|++++||||||||+ +++++++++||++|+++|+.+|+++.
T Consensus 293 ~v~lGvvd~~~~~~e~~e~v~~ri~~a~~~v~~e~l~lsPdCGl~s~~~g~~~t~~~a~~kL~~~v~~A~~~~~~~~ 369 (375)
T 1ypx_A 293 KIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLANDIWGELE 369 (375)
T ss_dssp EEEEEEECSSSCC-CCSHHHHHHHHHHHHHSCGGGEEEEESSCCC--------CHHHHHHHHHHHHHHHHHHSCC--
T ss_pred eEEEeeecCcCCCCCCHHHHHHHHHHHHHhcCccceEecCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHHhchh
Confidence 999999999999999999999999999999999999999999999 89999999999999999999998874
No 7
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=100.00 E-value=2.5e-60 Score=509.14 Aligned_cols=323 Identities=47% Similarity=0.640 Sum_probs=269.6
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCC
Q 016581 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (387)
Q Consensus 1 ~~tt~vG-~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~ 79 (387)
++||+|| |||| .+|++|+++|.+|+|+.++|+++++++|+++|+.|+++|||+||||||+|.|||.||++.++|+.
T Consensus 432 ~~tt~vGSfprp---~~l~~ar~~~~~g~i~~~~~~~~~~~~i~~~V~~Q~~~GldvvtdGE~~R~~~~~~f~~~l~G~~ 508 (765)
T 1u1j_A 432 LPTTTIGSFPQT---VELRRVRREYKAKKVSEEDYVKAIKEEIKKVVDLQEELDIDVLVHGEPERNDMVEYFGEQLSGFA 508 (765)
T ss_dssp SCBBCCSBCCCC---SCCC-------------CCHHHHHHHHHHHHHHHHHSSCCSBBCCBCTTCSCTTHHHHTTSTTEE
T ss_pred CccCccCCCCCC---HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeeecchhccccHHHHHHHHhCCCc
Confidence 4699999 9999 88999999999999999999999999999999999999999999999999999999999998882
Q ss_pred CCccCCCCCcchhhhhhhhhcCCccccccccccccCCcceecceeccCcccccCCcccHHHHHHHHhC-CCCCCceeecH
Q 016581 80 PRFNWNGGEIGFDVYFSMARGNASVLAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGH-GVETVPVLIGP 158 (387)
Q Consensus 80 ~r~~~~~~~~~~~~~F~~a~g~~~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~~~~~~~~~~~ak~~-g~~~k~~l~GP 158 (387)
+. ..++.+.++++ .++.|.|.|++.++ .+..+++++++++. +.+.|.+||||
T Consensus 509 --~~----------------------~~g~~~~~~~~-~~~~p~i~g~i~~~--~p~~ve~~~~l~~~~~~pvK~~l~GP 561 (765)
T 1u1j_A 509 --FT----------------------ANGWVQSYGSR-CVKPPVIYGDVSRP--KAMTVFWSAMAQSMTSRPMKGMLTGP 561 (765)
T ss_dssp --CC----------------------SSCCEEEETTE-EECCCEECSCCCCC--SCSSTHHHHHHTTSCSSCBEEEEECH
T ss_pred --cc----------------------cCCcccccccc-cCcCCeeecCcCCC--CCCHHHHHHHHHHHhcCCeEEEecCH
Confidence 11 01122334443 36789999998654 46689999999987 45678899999
Q ss_pred HHHHHhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCC------hHHHHHHHHHHHHHHcC
Q 016581 159 VSYLLLSKPAWGVEKTFSVLSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLD------SHKLQAFIHSFRITNCG 232 (387)
Q Consensus 159 ~tl~~~~~~~~~~~~~~~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~------~~~~~~a~~~~~~~~~~ 232 (387)
+|++.++..... .+.++++++++.+|++++++|+++||++||||||.+...++ ....+++++++|.++++
T Consensus 562 ~Tl~~~~~~r~~----~~~~~l~~~lA~a~~~ev~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~~~~~~~~ 637 (765)
T 1u1j_A 562 VTILNWSFVRND----QPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCG 637 (765)
T ss_dssp HHHHHTSEECTT----SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhccCc----CcHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcccccccccCCCHHHHHHHHHHHHHHHHhc
Confidence 999876643221 17899999999999999999999999999999999987652 13467899999999999
Q ss_pred CCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHH
Q 016581 233 IQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYE 312 (387)
Q Consensus 233 ~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~ 312 (387)
++.++++++|+|||||+++++.|.++++|+|+||.+++++++|+.+.+.+++++.|++||||++++.+|++|+|++||++
T Consensus 638 v~~~~~i~~HiC~G~~~~i~~~l~~~~~D~islE~~rs~~e~L~~~~~~~~~~~~v~lGvvd~~s~~ve~~eev~~ri~~ 717 (765)
T 1u1j_A 638 VQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNK 717 (765)
T ss_dssp SCSSSEEEEECSCSCCTTTHHHHHTTCCSEEECCBSSSCTTGGGGGTTTTCCCSEECCBSSCTTSSSCCTHHHHHHHHHH
T ss_pred CCCCCeEEEEeccCCcHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHhhccCCCeEEEeecCCccCCCCCHHHHHHHHHH
Confidence 99889999999999999999999999999999998887899998876412246799999999999999999999999999
Q ss_pred HHhhcCCCcEEEcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHhC
Q 016581 313 MRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQLT 357 (387)
Q Consensus 313 a~~~v~~~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~~~r~~l~ 357 (387)
+++++|++++||||||||++++++++++||++|+++|+.+|++|+
T Consensus 718 a~~~v~~e~l~lsPdCGl~t~t~~e~~~kL~~mveaA~~vr~~~~ 762 (765)
T 1u1j_A 718 MLAVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIRSQLA 762 (765)
T ss_dssp HHHSSCSTTBCBBCSSCSSSSCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHhcCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999875
No 8
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=100.00 E-value=1e-32 Score=290.93 Aligned_cols=180 Identities=18% Similarity=0.218 Sum_probs=151.8
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCC
Q 016581 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (387)
Q Consensus 1 ~~tt~vG-~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~ 79 (387)
++||+|| |||| .|||+|+++||+|+||.++|+++++++++++|+.|+++|||+||||||+|||||+||+++|+|+|
T Consensus 436 ~pTt~IGSfPrp---~ELK~Are~y~~G~Is~eeL~~~~~~~i~~~V~~QeeaGLDvItdGEFsR~D~Vldf~~~L~Gi~ 512 (766)
T 1t7l_A 436 FPTTTIGSFPQT---PEVRKMRSKYRKGEISKEEYEAFIKEQIKKAIELQEEIGLDVLVHGEFERTDMVEFFAEKLNGIA 512 (766)
T ss_dssp SCBCCCSCCCCC---HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHTCSSBCCCCTTCSSHHHHHHTTSEEEE
T ss_pred cceeeeCcCCCC---HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCccCCCCcchhhHHHHHHHHhCCcc
Confidence 4699999 9999 99999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCccCCCCCcchhhhhhhhhcCCccccccccccccCCcceecceeccCcccccCCcccHHHHHHHHhCCC-CCCceeecH
Q 016581 80 PRFNWNGGEIGFDVYFSMARGNASVLAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGHGV-ETVPVLIGP 158 (387)
Q Consensus 80 ~r~~~~~~~~~~~~~F~~a~g~~~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~~~~~~~~~~~ak~~g~-~~k~~l~GP 158 (387)
.++. |. .+.+++. .|..|.+.|++. ...+..++++++|++.+. ++|++||||
T Consensus 513 ~~~~---g~---------------------~~~~~~~-~~~~pi~~G~i~--ra~pMtlde~~~Aksl~~~pvK~~LtGP 565 (766)
T 1t7l_A 513 TTQN---GW---------------------VLSYGSR-CYRPPIIYGTVT--RPEPMTLKEITYAQSLTEKPVKGMLTGP 565 (766)
T ss_dssp CCSS---CC---------------------EEEETTE-EECCCEEEEEEE--CCSCSSHHHHHHHHHTCSSCBEEEEECH
T ss_pred cccc---cc---------------------ccccccc-cccCceeecCCc--cCCcChHHHHHHHHHhcCCCeEEEEeCH
Confidence 6542 10 0111221 255677888753 234568999999999853 479999999
Q ss_pred HHHHHhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCC
Q 016581 159 VSYLLLSKPAWGVEKTFSVLSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDL 214 (387)
Q Consensus 159 ~tl~~~~~~~~~~~~~~~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l 214 (387)
+|++.++...+. +++++++++|+.+|++++++|+++||++||||||+|+.++
T Consensus 566 vTlL~ls~~r~d----~~r~ell~dLA~ayreeI~~L~~AGa~~IQIDEPaL~~~L 617 (766)
T 1t7l_A 566 VTIMSWSYYRED----IPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKA 617 (766)
T ss_dssp HHHHHTSEECSS----SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTHHHHTS
T ss_pred HHHHHHhhccCC----CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccC
Confidence 999987753222 2789999999999999999999999999999999998654
No 9
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=99.97 E-value=6.5e-31 Score=278.40 Aligned_cols=178 Identities=20% Similarity=0.232 Sum_probs=150.5
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCC
Q 016581 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (387)
Q Consensus 1 ~~tt~vG-~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~ 79 (387)
.+||+|| |||| .+|++||++|.+|+||.++|+++++++|+++|++|+++|||+||||||+|.|||.+|++.++|+.
T Consensus 463 ~ptt~VGSfPRp---~~L~~aR~~~~~G~is~~el~~~~~~aI~~vV~~Qe~~GLdvvtDGE~~R~d~v~~F~e~L~G~~ 539 (789)
T 3ppg_A 463 FPTTTIGSFPQT---KDIRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDVLVHGEPERNDMVQYFGEQLNGFA 539 (789)
T ss_dssp SCBBCCSCCCCC---HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHTCSBBCCCCTTCSCTTHHHHTTSEEEE
T ss_pred ceeccccCcCCC---HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeCCCccchhHHHHHHHhCCCee
Confidence 3699999 9999 99999999999999999999999999999999999999999999999999999999999888772
Q ss_pred CCccCCCCCcchhhhhhhhhcCCccccccccccccCCcceecceeccCcccccCCccc-HHHHHHHHhC-CCCCCceeec
Q 016581 80 PRFNWNGGEIGFDVYFSMARGNASVLAMEMTKWFDTNYHFIVPELGPDVKFSYASHKA-VTEYKEAKGH-GVETVPVLIG 157 (387)
Q Consensus 80 ~r~~~~~~~~~~~~~F~~a~g~~~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~~~~~-~~~~~~ak~~-g~~~k~~l~G 157 (387)
+. ..+..++++++ .++.|.|+|++.+. +++ ++++++++++ +.+.|.+|||
T Consensus 540 --~~----------------------~~g~vq~~g~r-~~~~p~i~G~V~~~---~p~~v~~~~~~qs~t~~pvK~~L~g 591 (789)
T 3ppg_A 540 --FT----------------------TNGWVQSYGSR-YVRPPIIVGDVSRP---KAMTVKESVYAQSITSKPMKGMLTG 591 (789)
T ss_dssp --CC----------------------SSCCEEEETTE-EECCCEEEEEEECC---SCSSHHHHHHHHHTCSSCBEEEEEC
T ss_pred --Ee----------------------cCcceEecCCc-cccCCeeeccCCCC---CCCcHHHHHHHHhhccCCCceeccc
Confidence 10 01112334432 46778999988643 555 9999999987 4568889999
Q ss_pred HHHHHHhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccC
Q 016581 158 PVSYLLLSKPAWGVEKTFSVLSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMD 213 (387)
Q Consensus 158 P~tl~~~~~~~~~~~~~~~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~ 213 (387)
|+|++.++.... | .++++++.|||.+|++++++|+++||++||||||+|...
T Consensus 592 P~ti~~~s~~r~-~---~~~ee~~~dlA~A~r~Ei~~L~~AG~r~IQiDEPal~e~ 643 (789)
T 3ppg_A 592 PVTILRWSFPRD-D---VSGKIQALQLGLALRDEVNDLEGAGITVIQVDEPAIREG 643 (789)
T ss_dssp HHHHHHTSBCCS-S---SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTTGGG
T ss_pred hHhHhhhhcccc-C---CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhc
Confidence 999988775422 2 178999999999999999999999999999999999653
No 10
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=99.96 E-value=2.2e-29 Score=269.00 Aligned_cols=180 Identities=18% Similarity=0.174 Sum_probs=136.0
Q ss_pred Cceeecc-CCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcccchhhhhHHHhhCCCC
Q 016581 1 MASHIVG-YPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVP 79 (387)
Q Consensus 1 ~~tt~vG-~PR~g~~~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef~~~d~vld~~~~~~~v~ 79 (387)
++||+|| |||| .+|++|+++|.+|+|+.++|+++++++++++|+.|+++|||+||||||+|.|||.||++.++|+.
T Consensus 417 ~~tt~VGSfprp---~~l~~ar~~~~~g~i~~~~l~~~~~~~i~~~V~~Q~~~GldvvtdGE~~R~d~v~~F~~~l~G~~ 493 (755)
T 2nq5_A 417 LPTTTIGSFPQS---REIRRTRLAWKRGDISDAEYKQFIQAEIERWIRIQEDLDLDVLVHGEFERVDMVEFFGQKLAGFT 493 (755)
T ss_dssp SCBBCCSBCCC--------------------CHHHHHHHHHHHHHHHHHHHHHTCSBBCCBCTTCSCTTHHHHTTEEEEE
T ss_pred cceeeeCCCCCC---HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccccHHHHHHHhCCCcc
Confidence 4699999 9999 99999999999999999999999999999999999999999999999999999999999988772
Q ss_pred CCccCCCCCcchhhhhhhhhcCCccccccccccccCCcceecceeccCcccccCCcccHHHHHHHHhC-CCCCCceeecH
Q 016581 80 PRFNWNGGEIGFDVYFSMARGNASVLAMEMTKWFDTNYHFIVPELGPDVKFSYASHKAVTEYKEAKGH-GVETVPVLIGP 158 (387)
Q Consensus 80 ~r~~~~~~~~~~~~~F~~a~g~~~~~~~~~~k~f~tny~y~~P~i~~~~~~~~~~~~~~~~~~~ak~~-g~~~k~~l~GP 158 (387)
+. ..+..+.++++ .++.|.|.|++.++ .+..+++++++++. +.+.|.++|||
T Consensus 494 --~~----------------------~~g~~~~~~~~-~~~~p~i~G~i~~~--~p~~ve~~~~l~~~t~~pvK~~l~GP 546 (755)
T 2nq5_A 494 --TT----------------------KFGWVQSYGSR-AVKPPIIYGDVQHL--EPITVEETVYAQSLTDRPVKGMLTGP 546 (755)
T ss_dssp --CC----------------------SSCCEEEETTE-EECCCEEEEEEEEC--SCSSHHHHHHHHHTCSSCBEEEEECH
T ss_pred --cc----------------------cCCcccccccc-CCCCCEecCCccCC--CCCHHHHHHHHHHhcCCCeEEEecCH
Confidence 11 01122334443 36789999988654 46689999999988 55678999999
Q ss_pred HHHHHhcCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCC
Q 016581 159 VSYLLLSKPAWGVEKTFSVLSLLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDL 214 (387)
Q Consensus 159 ~tl~~~~~~~~~~~~~~~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l 214 (387)
+|++.++..... .+.++++++++.+|++++++|+++||++||||||.+...+
T Consensus 547 ~Tl~~~~~~r~~----~~~~el~~~lA~a~~~ei~~L~~aG~~~IQiDEP~l~~~l 598 (755)
T 2nq5_A 547 ITITNWSFERTD----IPRDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGL 598 (755)
T ss_dssp HHHHHHSBCCSS----SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCHHHHS
T ss_pred HHHHHHHhccCc----ccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccc
Confidence 999977653221 1789999999999999999999999999999999997544
No 11
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=99.74 E-value=4.6e-17 Score=160.46 Aligned_cols=206 Identities=13% Similarity=0.038 Sum_probs=156.0
Q ss_pred ccHHHHHHHHhC--CCCCCceeecHHHHHHh-c--CCCCCcc----CCC-C---HHHHHHHHHHHHHHHHHHHHHcCCCE
Q 016581 136 KAVTEYKEAKGH--GVETVPVLIGPVSYLLL-S--KPAWGVE----KTF-S---VLSLLPKILPIYKEVVSELKAAGASW 202 (387)
Q Consensus 136 ~~~~~~~~ak~~--g~~~k~~l~GP~tl~~~-~--~~~~~~~----~~~-~---~~~l~~~la~~~~~~i~~L~~aG~~~ 202 (387)
..++.++.+++. +.+....+.||+|++.. . ...+.+. .-| + ..++++.+++++.+.++++.++|++.
T Consensus 130 ~~~ea~~~l~~~~~~~~l~g~~~~P~tla~~l~~gg~s~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~ 209 (359)
T 2inf_A 130 YVLETIKLLVNEQLNVPLIGFSGAPFTLASYMTEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGAKA 209 (359)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEEECHHHHHHHHHHCSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHhCCcceEEEcCcHHHHHHHHHcCCCcccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 345666666543 23445569999998742 2 2111210 011 2 35899999999999999999999999
Q ss_pred EEecCcccccCCChH-HHHHHHHHHHHHHcCCCC-CceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCChhhhHHhhh
Q 016581 203 IQFDEPLLVMDLDSH-KLQAFIHSFRITNCGIQD-TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFRE 280 (387)
Q Consensus 203 IQiDEP~l~~~l~~~-~~~~a~~~~~~~~~~~~~-~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~~e~L~~~~~ 280 (387)
|||+|| |+..++++ +.+.+.+.+++++++++. ++.+..| |.|+ ..+++.+.++++|++++|.. .+++.++.. .
T Consensus 210 i~i~D~-~~~~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~-~~G~-~~~l~~l~~~g~d~~~~d~~-~d~~~~~~~-g 284 (359)
T 2inf_A 210 IQIFDS-WVGALNQADYRTYIKPVMNRIFSELAKENVPLIMF-GVGA-SHLAGDWHDLPLDVVGLDWR-LGIDEARSK-G 284 (359)
T ss_dssp EEEECT-TGGGSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEE-CTTC-GGGHHHHHTSSCSEEECCTT-SCHHHHHHT-T
T ss_pred EEEeCC-ccccCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEE-cCCc-HHHHHHHHHhCCCEEEeCCC-CCHHHHHHc-C
Confidence 999999 55556654 577889999998888764 3455555 5588 78999999999999999853 355555443 3
Q ss_pred ccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCC--CcEEEcCCCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q 016581 281 GVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLET--NILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQ 355 (387)
Q Consensus 281 ~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~--~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~~~r~~ 355 (387)
++.++.|.+|+ +...+|+|+|.++++++++. +. ...++||+||+.. +...+++++|+++++.+++.
T Consensus 285 ----~~~~l~Gnldp-~~l~~t~e~I~~~v~~~l~~-~~~~~g~Il~~gcgi~~---~~~~enl~a~ve~v~~~~~~ 352 (359)
T 2inf_A 285 ----ITKTVQGNLDP-SILLAPWEVIEQKTKEILDQ-GMESDGFIFNLGHGVFP---DVSPEVLKKLTAFVHEYSQN 352 (359)
T ss_dssp ----CCSEEECCBCG-GGGGSCHHHHHHHHHHHHHH-HTTSSCEEBCBSSCCCT---TSCHHHHHHHHHHHHHHHHH
T ss_pred ----CCEEEEecCCh-HHhcCCHHHHHHHHHHHHHh-CCCCCCeEEeCCCCCCC---CcCHHHHHHHHHHHHHhhhh
Confidence 56799999999 55689999999999999998 66 3799999999975 55789999999999998764
No 12
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=99.70 E-value=1.5e-17 Score=163.43 Aligned_cols=205 Identities=11% Similarity=0.058 Sum_probs=153.2
Q ss_pred ccHHHHHHHHhC-C--CCCCceeecHHHHHHhc-C--CCCCcc----CCC-C---HHHHHHHHHHHHHHHHHHHHHcCCC
Q 016581 136 KAVTEYKEAKGH-G--VETVPVLIGPVSYLLLS-K--PAWGVE----KTF-S---VLSLLPKILPIYKEVVSELKAAGAS 201 (387)
Q Consensus 136 ~~~~~~~~ak~~-g--~~~k~~l~GP~tl~~~~-~--~~~~~~----~~~-~---~~~l~~~la~~~~~~i~~L~~aG~~ 201 (387)
.+.+.++.+++. + .+....+.||+|++... . ....+. .-| + ..++++.+++++.+.++++.++|++
T Consensus 129 ~v~e~~~~l~~~~~~~~~~~g~~~~P~tla~~l~~g~~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad 208 (353)
T 1j93_A 129 YVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQ 208 (353)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEECHHHHHHHHHHSBCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHhCCCceEEEecChHHHHHHHHHcCCCcccHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 355666666643 2 34455699999987422 1 111110 011 2 3579999999999999999999999
Q ss_pred EEEecCcccccCCChH-HHHHHHHHHHHHHcCCCC---CceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCChhhhHH
Q 016581 202 WIQFDEPLLVMDLDSH-KLQAFIHSFRITNCGIQD---TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSV 277 (387)
Q Consensus 202 ~IQiDEP~l~~~l~~~-~~~~a~~~~~~~~~~~~~---~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~~e~L~~ 277 (387)
.||++|| |+..++++ +.+.+.+.++++++.++. ++. .+|+|.|+ ..+++.+.++++|++++|.. .+++.++.
T Consensus 209 ~iqi~D~-~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~-~ih~c~g~-~~~l~~l~~~g~d~~~~d~~-~d~~~~~~ 284 (353)
T 1j93_A 209 AVQIFDS-WATELSPVDFEEFSLPYLKQIVDSVKLTHPNLP-LILYASGS-GGLLERLPLTGVDVVSLDWT-VDMADGRR 284 (353)
T ss_dssp EEEEECG-GGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCC-EEEECSSC-TTTGGGGGGGCCSEEECCTT-SCHHHHHH
T ss_pred EEEEeCc-ccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCC-EEEECCCh-HHHHHHHHhcCCCEEEeCCC-CCHHHHHH
Confidence 9999999 44446654 577888888888887752 344 47999665 56889999999999999853 35555443
Q ss_pred hhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCCCChhhHHHHHHHHHHHHHHH
Q 016581 278 FREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLL 352 (387)
Q Consensus 278 ~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~~~ 352 (387)
. ++ ++.++.|.+|+ +...+|+|+|.++++++++.++.+..++||+||+.. +...+|+++|+++++..
T Consensus 285 ~---~g-~~~~l~Gnldp-~~l~~~~e~i~~~v~~~l~~~~~~g~I~~~g~gi~~---~~~~enl~a~ve~v~~~ 351 (353)
T 1j93_A 285 R---LG-PNVAIQGNVDP-GVLFGSKEFITNRINDTVKKAGKGKHILNLGHGIKV---GTPEENFAHFFEIAKGL 351 (353)
T ss_dssp H---TC-SSSEEECCBCG-GGGGSCHHHHHHHHHHHHHHHCSSSEEBCBSSCCCT---TCCHHHHHHHHHHHHTC
T ss_pred H---cC-CCeEEEecCCH-HHHcCCHHHHHHHHHHHHHHhCCCCEEEeCCCCCCC---CCCHHHHHHHHHHHHHh
Confidence 2 11 46799999999 556899999999999999998878999999999975 55789999999999753
No 13
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=99.54 E-value=7.3e-14 Score=137.21 Aligned_cols=208 Identities=11% Similarity=0.027 Sum_probs=153.7
Q ss_pred cHHHHHHHHh-CC--CCCCceeecHHHHHHh-c--CCCCCcc----CCC-C---HHHHHHHHHHHHHHHHHHHHHcCCCE
Q 016581 137 AVTEYKEAKG-HG--VETVPVLIGPVSYLLL-S--KPAWGVE----KTF-S---VLSLLPKILPIYKEVVSELKAAGASW 202 (387)
Q Consensus 137 ~~~~~~~ak~-~g--~~~k~~l~GP~tl~~~-~--~~~~~~~----~~~-~---~~~l~~~la~~~~~~i~~L~~aG~~~ 202 (387)
.++.++.+++ .+ .+....+.||+|++.. . .....+. .-| + ..++++.+++...+.++.+.++|++.
T Consensus 124 v~eai~~l~~~~~~~~plig~~~~P~tla~~l~~g~~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~ 203 (354)
T 3cyv_A 124 VMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQA 203 (354)
T ss_dssp HHHHHHHHHHHTTTSSCEEEEEECHHHHHHHHHHSSCCSSCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCeeEEEeCCcHHHHHHHHhCCCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 4556665554 32 3344458999999752 1 1111110 011 3 34778999999999999999999999
Q ss_pred EEecCcccccCCChH-HHHHHHHHHHHHHcCCCCC-----ceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCChhhhH
Q 016581 203 IQFDEPLLVMDLDSH-KLQAFIHSFRITNCGIQDT-----TQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLS 276 (387)
Q Consensus 203 IQiDEP~l~~~l~~~-~~~~a~~~~~~~~~~~~~~-----~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~~e~L~ 276 (387)
|||.||..+ .++++ +.+.+.+.++++++.++.. +. .+|+|.|. ..+++.+.++++|++++|. ..+++.++
T Consensus 204 i~i~d~~~~-~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~~~g~-~~~l~~l~~~g~d~i~~d~-~~dl~~~~ 279 (354)
T 3cyv_A 204 VMIFDTWGG-VLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLFTKGG-GQWLEAMAETGCDALGLDW-TTDIADAR 279 (354)
T ss_dssp EEEECTTGG-GSCHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEECTTT-TTTHHHHHTTSCSEEECCT-TSCHHHHH
T ss_pred EEEeCCccc-cCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEECCCH-HHHHHHHHhcCCCEEEeCC-CCCHHHHH
Confidence 999997544 46654 5788999999999988642 33 68999554 7889999999999999984 23554443
Q ss_pred HhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCC-CcEEEcCCCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q 016581 277 VFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLET-NILWVNPDCGLKTRKYTEVKPALSNMVAATKLLRTQ 355 (387)
Q Consensus 277 ~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~-~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~~~r~~ 355 (387)
..-. ++.+..|.+|+.. ...|+|+|.+.+++.++.++. ...+++|+||+.+- ...+++++|+++++..+++
T Consensus 280 ~~~g----~~~~l~Gn~dp~~-l~~t~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~---~p~env~a~v~~v~~~~~~ 351 (354)
T 3cyv_A 280 RRVG----NKVALQGNMDPSM-LYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQD---VPPEHAGVFVEAVHRLSEQ 351 (354)
T ss_dssp HHHT----TTSEEECCBCGGG-GGSCHHHHHHHHHHHHTTTTTSSCEEBCBSSCCCTT---SCHHHHHHHHHHHHHHHGG
T ss_pred HHhC----CCeEEEecCChHH-hCCCHHHHHHHHHHHHHHhCCCCCeEEecCCCCCCC---CCHHHHHHHHHHHHHHhHH
Confidence 3212 4678999999844 478999999999999999875 58999999999764 4589999999999998776
Q ss_pred h
Q 016581 356 L 356 (387)
Q Consensus 356 l 356 (387)
+
T Consensus 352 ~ 352 (354)
T 3cyv_A 352 Y 352 (354)
T ss_dssp G
T ss_pred h
Confidence 4
No 14
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=99.52 E-value=2.8e-13 Score=133.73 Aligned_cols=208 Identities=13% Similarity=0.049 Sum_probs=151.1
Q ss_pred cHHHHHHHHhC-C--CCCCceeecHHHHHHhc---CCCCCcc---C-CC-CH---HHHHHHHHHHHHHHHHHHHHcCCCE
Q 016581 137 AVTEYKEAKGH-G--VETVPVLIGPVSYLLLS---KPAWGVE---K-TF-SV---LSLLPKILPIYKEVVSELKAAGASW 202 (387)
Q Consensus 137 ~~~~~~~ak~~-g--~~~k~~l~GP~tl~~~~---~~~~~~~---~-~~-~~---~~l~~~la~~~~~~i~~L~~aG~~~ 202 (387)
.++.++.+++. + .+....+.||+|++... .....+. . -| ++ .++++.+++.+.+.++.+.++|++.
T Consensus 134 v~eai~~l~~~~~~~~plig~~~~P~tla~~l~egg~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~i~aGad~ 213 (367)
T 1r3s_A 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQA 213 (367)
T ss_dssp HHHHHHHHHHHHTTSSCEEEEEECHHHHHHHHHHSSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCccEEEEcCcHHHHHHHHHcCCCcccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 34455555432 2 23333588999988432 2211110 0 01 23 4678899999999999999999999
Q ss_pred EEecCcccccCCChH-HHHHHHHHHHHHHcCCC-C-------CceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCChh
Q 016581 203 IQFDEPLLVMDLDSH-KLQAFIHSFRITNCGIQ-D-------TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNEN 273 (387)
Q Consensus 203 IQiDEP~l~~~l~~~-~~~~a~~~~~~~~~~~~-~-------~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~~e 273 (387)
|||.|+. +..++++ +.+.+.+.++++++.++ . ++.+.+|+| |+ ..+++.+.++++|++++|. ..+..
T Consensus 214 i~i~D~~-~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~-G~-~~~l~~l~~~g~d~i~~d~-~~dl~ 289 (367)
T 1r3s_A 214 LQLFESH-AGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAK-DG-HFALEELAQAGYEVVGLDW-TVAPK 289 (367)
T ss_dssp EEEEETT-GGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEET-TC-GGGHHHHTTSSCSEEECCT-TSCHH
T ss_pred EEEecCc-cccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcC-Cc-HHHHHHHHhcCCCEEEeCC-CCCHH
Confidence 9999984 4446665 56777888877777665 1 367888888 66 7899999999999999984 23444
Q ss_pred hhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCCCChhhHHHHHHHHHHHHHHHH
Q 016581 274 LLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLLR 353 (387)
Q Consensus 274 ~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~~~r 353 (387)
.++.. ++ ++....|.+|+. ....|+|+|.+.+++.++.++....+++++||+.+ +...+++++|+++++..+
T Consensus 290 ~a~~~---~g-~~~~l~Gnldp~-~L~gt~e~i~~~v~~~l~~~g~~g~I~~~ghgi~~---~~p~env~a~v~~v~~~~ 361 (367)
T 1r3s_A 290 KAREC---VG-KTVTLQGNLDPC-ALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYP---DMDPEHVGAFVDAVHKHS 361 (367)
T ss_dssp HHHHH---HC-SSSEEEEEECGG-GGGSCHHHHHHHHHHHHHHHCSSSEEEEESSCCCT---TCCHHHHHHHHHHHHHHH
T ss_pred HHHHH---cC-CCeEEEeCCChH-HhcCCHHHHHHHHHHHHHHhCCCCeeecCCCCCCC---CCCHHHHHHHHHHHHHHH
Confidence 43332 11 467889999994 44789999999999999998768999999999976 445899999999999988
Q ss_pred HHh
Q 016581 354 TQL 356 (387)
Q Consensus 354 ~~l 356 (387)
+++
T Consensus 362 ~~~ 364 (367)
T 1r3s_A 362 RLL 364 (367)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 15
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=99.44 E-value=3.7e-13 Score=131.39 Aligned_cols=202 Identities=14% Similarity=0.076 Sum_probs=144.9
Q ss_pred cHHHHHHHHhC--CCCCCceeecHHHHHHh-c--CCCCCcc----CCC-CH---HHHHHHHHHHHHHHHHHHHHcCCCEE
Q 016581 137 AVTEYKEAKGH--GVETVPVLIGPVSYLLL-S--KPAWGVE----KTF-SV---LSLLPKILPIYKEVVSELKAAGASWI 203 (387)
Q Consensus 137 ~~~~~~~ak~~--g~~~k~~l~GP~tl~~~-~--~~~~~~~----~~~-~~---~~l~~~la~~~~~~i~~L~~aG~~~I 203 (387)
..+..+.+++. +.+....+.||+|++.. . .....+. .-| ++ .++++.+++.+.+.++.+.++|++.|
T Consensus 117 v~eai~~l~~~~~~~plig~~~~P~tla~~l~egg~~~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i 196 (338)
T 2eja_A 117 VYEIIKRVKEAQDEVPVIGFAGAPFTLLSYLIEGGASKDFKSTKLFMWENPKEYKRLMDILTETVLAYLKEQIKAGADVV 196 (338)
T ss_dssp HHHHHHHHHHHCCSSCEEEEEECHHHHHHHHHHTSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhcCccEEEecchHHHHHHHHHcCCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 45556655532 22333348899998743 2 1111110 011 33 47899999999999999999999999
Q ss_pred EecCcccccCCChH-HHHHHHHHHHHHHcCCCC--CceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCChhhhHHhhh
Q 016581 204 QFDEPLLVMDLDSH-KLQAFIHSFRITNCGIQD--TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFRE 280 (387)
Q Consensus 204 QiDEP~l~~~l~~~-~~~~a~~~~~~~~~~~~~--~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~~e~L~~~~~ 280 (387)
|+.||..+ .++++ +.+.+.+.++++++.++. ++.+..|+| |+ ..+++.+.++++|++++|.. .+++ ..++
T Consensus 197 ~i~d~~~~-~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~-g~-~~~l~~l~~~g~d~~~~d~~-~dl~---~~~~ 269 (338)
T 2eja_A 197 QIFDSWVN-NLSLEDYGEYVYPYVNYLISELKDFSDTPVIYFFR-GS-SSFIDLAVDYRADALSVDWS-VDIP---ELFK 269 (338)
T ss_dssp EEEETTGG-GSCHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEES-SH-HHHHHHHTTSCCSEEECCTT-SCHH---HHHH
T ss_pred EEecCccc-cCCHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcC-Cc-HHHHHHHHHcCCCEEEeCCC-CCHH---HHHH
Confidence 99998655 36665 567778888777766631 456666655 76 78999999999999999842 2333 3333
Q ss_pred ccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCC-CcEEEcCCCCCCCCChhhHHHHHHHHHHHHHHH
Q 016581 281 GVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLET-NILWVNPDCGLKTRKYTEVKPALSNMVAATKLL 352 (387)
Q Consensus 281 ~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~-~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~~~ 352 (387)
.+ +....|.+|+ +....|+|+|.+.+++.++.++. ...+++|+||+.+ +...+++++|+++++..
T Consensus 270 ~~---~~~l~Gn~dp-~~l~gt~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~---~~p~en~~a~v~~v~~~ 335 (338)
T 2eja_A 270 IY---DKGFQGNLEP-AVLYASEEVIEEKTLGLLRRIPVKTRYVFNLGHGLAP---DMELEKVKYLVDLVKSF 335 (338)
T ss_dssp HC---CSEEECCBCG-GGGGSCHHHHHHHHHHHHTTCCCSSSEEBCBSSCCCT---TSCHHHHHHHHHHHHTC
T ss_pred hC---CeEEEECCCH-HHhcCCHHHHHHHHHHHHHHhCCCCCeEEeCCCCCCC---CCCHHHHHHHHHHHHHh
Confidence 12 5788999998 44578999999999999999875 6899999999965 44689999999998753
No 16
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=99.40 E-value=4.3e-12 Score=124.32 Aligned_cols=203 Identities=16% Similarity=0.138 Sum_probs=144.0
Q ss_pred cHHHHHHHHhC-C--CCCCceeecHHHHHHhc-CCCCCccCCC-C---HHHHHHHHHHHHHHHHHHHHHcCCCEEEecCc
Q 016581 137 AVTEYKEAKGH-G--VETVPVLIGPVSYLLLS-KPAWGVEKTF-S---VLSLLPKILPIYKEVVSELKAAGASWIQFDEP 208 (387)
Q Consensus 137 ~~~~~~~ak~~-g--~~~k~~l~GP~tl~~~~-~~~~~~~~~~-~---~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP 208 (387)
.++..+.+++. + .+.-..+-||+|++... ...+....-+ + ..++++.+++.+.+.++.+.++|++.|||-|+
T Consensus 133 v~eai~~l~~~l~~~~pligf~g~P~Tla~~l~~~~~~~~~~~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i~D~ 212 (348)
T 4ay7_A 133 VLEAIKIIREKVGPDVPIVGGMEGPVTVASDLVSVKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAIADP 212 (348)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEEECHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECG
T ss_pred HHHHHHHHHHHhCCCeeEEEeccchHHHHHhcccchHHHHHHHHChHhHHHHHHHHHHHHHHHHHHHHhcCCCcceeecc
Confidence 35555655543 3 12222488999987432 1111110001 2 35778888889999999999999999999998
Q ss_pred ccccC-CChH-HHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCChhhhHHhhhccCCCc
Q 016581 209 LLVMD-LDSH-KLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDA 286 (387)
Q Consensus 209 ~l~~~-l~~~-~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~~e~L~~~~~~~~~~k 286 (387)
..+.. ++++ +.+.+.+.++++++.++. ...+|+| |+...+++.+.++++|+++++..-.+.+..+..-. ++
T Consensus 213 ~a~~~~lsp~~f~~f~~p~~k~i~~~~~~--~~iih~~-g~~~~~l~~~~~~g~d~i~~d~~~~~~~~~k~~~g----~~ 285 (348)
T 4ay7_A 213 VASPDLMSPDSFRQFLKSRLQKFASSVNS--VTVLHIC-GNVNPILSDMADCGFEGLSVEEKIGSAKKGKEVIG----TR 285 (348)
T ss_dssp GGSTTTSCHHHHHHHHHHHHHHHHHHSSS--EEEEECC-SCCHHHHHHHHTSCCSEEECCGGGCCHHHHHHHHT----TS
T ss_pred ccccccCCHHHHHHHhhHHHHHHHhhccC--CcEEEec-CCcHHHHHHHHHhccccccccchhhHHHHHHHHhC----CC
Confidence 76543 4444 577888999999998863 4568999 78888999999999999999843323443333221 35
Q ss_pred ccccccccCC-CCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCCCChhhHHHHHHHHHHHHHHH
Q 016581 287 AIGPGVYDIH-SPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVAATKLL 352 (387)
Q Consensus 287 ~l~lGvvd~~-s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~~~ 352 (387)
....|.+|.. .....++|+|.+.++++++. ..-+++|+||+.+-+ ..+++++|+++++..
T Consensus 286 ~~l~Gnldp~~~l~~g~~e~i~~~v~~~l~~---~g~I~~~Ghgi~p~t---p~env~a~v~av~ey 346 (348)
T 4ay7_A 286 ARLVGNVSSPFTLLPGPVDKIKAEAKEALEG---GIDVLAPGCGIAPMT---PLENVKALVAARDEF 346 (348)
T ss_dssp SEEEEEECCCCCCTTCCHHHHHHHHHHHHHT---TCSEEEESSSCCTTC---CHHHHHHHHHHHHHH
T ss_pred EEEEcCCCChHhhcCCCHHHHHHHHHHHHhC---CCCEEeCCCccCCCC---CHHHHHHHHHHHHHh
Confidence 5677999874 44568999999999999884 455899999987644 478999999999864
No 17
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=99.26 E-value=1.6e-10 Score=114.06 Aligned_cols=209 Identities=9% Similarity=0.010 Sum_probs=150.2
Q ss_pred cHHHHHHHHhC-CCC----CCc---eeecHHHHHHh-cC--CCCCccC----CC-C---HHHHHHHHHHHHHHHHHHHHH
Q 016581 137 AVTEYKEAKGH-GVE----TVP---VLIGPVSYLLL-SK--PAWGVEK----TF-S---VLSLLPKILPIYKEVVSELKA 197 (387)
Q Consensus 137 ~~~~~~~ak~~-g~~----~k~---~l~GP~tl~~~-~~--~~~~~~~----~~-~---~~~l~~~la~~~~~~i~~L~~ 197 (387)
.++.++.+++. +.. ..| .+-||+|++.. .. ....+.. -| + ..++++.+++...+.++++.+
T Consensus 129 v~eai~~l~~~l~~~~~~~~vpligf~gaP~Tla~~l~~g~~s~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~y~~~qi~ 208 (368)
T 4exq_A 129 VTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYLNAQIE 208 (368)
T ss_dssp HHHHHHHHHHHTBCTTSCBSSCEEEEEECHHHHHHHHHHTBCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcCcccceeEEEeCCcHHHHHHHHHcCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566665543 320 123 37899998752 11 1111100 01 2 357888899999999999999
Q ss_pred cCCCEEEecCcccccCCChH-HHHHHHHHHHHHHcCCCC-----CceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCC
Q 016581 198 AGASWIQFDEPLLVMDLDSH-KLQAFIHSFRITNCGIQD-----TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSN 271 (387)
Q Consensus 198 aG~~~IQiDEP~l~~~l~~~-~~~~a~~~~~~~~~~~~~-----~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~ 271 (387)
+|++.|||-|+. +..++++ +.+.+.+.++++++.++. ++.+ +|+|.|. ..+++.+.++++|++++|... +
T Consensus 209 aGad~i~ifDs~-~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pv-i~f~~g~-~~~l~~l~~~g~d~i~~d~~~-d 284 (368)
T 4exq_A 209 AGAQAVMIFDTW-GGALADGAYQRFSLDYIRRVVAQLKREHDGARVPA-IAFTKGG-GLWLEDLAATGVDAVGLDWTV-N 284 (368)
T ss_dssp HTCSEEEEEETT-GGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCE-EEEETTC-GGGHHHHHTSSCSEEECCTTS-C
T ss_pred hCCCEEEEeCCc-cccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcE-EEEcCCc-HHHHHHHHHhCCCEEeeCCCC-C
Confidence 999999987764 4445554 578899999999998875 2455 5556465 678899999999999998432 4
Q ss_pred hhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCC-CcEEEcCCCCCCCCChhhHHHHHHHHHHHHH
Q 016581 272 ENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLET-NILWVNPDCGLKTRKYTEVKPALSNMVAATK 350 (387)
Q Consensus 272 ~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~-~~l~isPdCGl~~~~~~~a~~kL~~lv~~a~ 350 (387)
++.++..-. ++....|.+|.... ..++|+|.+.++++++..+. ...+++++||+.+-+ ..+++++|+++++
T Consensus 285 l~~ak~~~g----~~~~l~Gnldp~~L-~gt~e~I~~~v~~~l~~~g~~~g~I~n~Ghgi~p~t---p~Env~a~veav~ 356 (368)
T 4exq_A 285 LGRARERVA----GRVALQGNLDPTIL-FAPPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFT---PPEHVAELVDEVH 356 (368)
T ss_dssp HHHHHHHHT----TSSEEEEEECGGGG-GSCHHHHHHHHHHHHHHHCSCSCEEEEESSCCCTTC---CHHHHHHHHHHHH
T ss_pred HHHHHHHhC----CCEEEEECCCHHHh-CCCHHHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCc---CHHHHHHHHHHHH
Confidence 444433221 35678899998654 78999999999999999864 679999999997643 5789999999999
Q ss_pred HHHHHhC
Q 016581 351 LLRTQLT 357 (387)
Q Consensus 351 ~~r~~l~ 357 (387)
.....+.
T Consensus 357 ~~~~~~~ 363 (368)
T 4exq_A 357 RHSRAIR 363 (368)
T ss_dssp HHHHHHC
T ss_pred HhCHHhh
Confidence 9887764
No 18
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=94.97 E-value=0.14 Score=47.16 Aligned_cols=139 Identities=14% Similarity=0.205 Sum_probs=79.5
Q ss_pred HHHHHHHHHHcCCCEEEecCc------ccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCC
Q 016581 188 YKEVVSELKAAGASWIQFDEP------LLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDAD 261 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDEP------~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD 261 (387)
+.++++.+.++|++|+++|=. .++. .+ ..+++++.....+ ...+|+++. |....++.+.+.++|
T Consensus 42 L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~--G~----~~v~~lr~~~p~~--~ldvHLmv~--~p~~~i~~~~~aGAd 111 (246)
T 3inp_A 42 LGDDVKAVLAAGADNIHFDVMDNHYVPNLTF--GP----MVLKALRDYGITA--GMDVHLMVK--PVDALIESFAKAGAT 111 (246)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSSCBCC--CH----HHHHHHHHHTCCS--CEEEEEECS--SCHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCcCcchhc--CH----HHHHHHHHhCCCC--eEEEEEeeC--CHHHHHHHHHHcCCC
Confidence 456778888899999999842 2332 22 3577777665233 345566655 666778889999999
Q ss_pred EEEEecCC-CC-hhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEE-cCCCCCCCCCh-hh
Q 016581 262 VITIENSR-SN-ENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWV-NPDCGLKTRKY-TE 337 (387)
Q Consensus 262 ~i~lE~~r-~~-~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~i-sPdCGl~~~~~-~~ 337 (387)
.+++-... .+ .+.++.+++ .+..+++ .+++.++ ++..+ ..++. .+.+.+ +=+-||+.... +.
T Consensus 112 ~itvH~Ea~~~~~~~i~~ir~---~G~k~Gv-alnp~Tp-~e~l~-------~~l~~--vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 112 SIVFHPEASEHIDRSLQLIKS---FGIQAGL-ALNPATG-IDCLK-------YVESN--IDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp EEEECGGGCSCHHHHHHHHHT---TTSEEEE-EECTTCC-SGGGT-------TTGGG--CSEEEEECSCTTC--CCCCTT
T ss_pred EEEEccccchhHHHHHHHHHH---cCCeEEE-EecCCCC-HHHHH-------HHHhc--CCEEEEeeecCCCCCcccchH
Confidence 99987322 23 346677766 2445544 2344443 33332 22333 345543 32345654322 35
Q ss_pred HHHHHHHHHHHHH
Q 016581 338 VKPALSNMVAATK 350 (387)
Q Consensus 338 a~~kL~~lv~~a~ 350 (387)
..+|++.+.+...
T Consensus 178 ~l~KI~~lr~~~~ 190 (246)
T 3inp_A 178 MLDKAKEISKWIS 190 (246)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6777777665543
No 19
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=94.41 E-value=0.22 Score=45.47 Aligned_cols=79 Identities=14% Similarity=0.211 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCCEEEecC------cccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCE
Q 016581 189 KEVVSELKAAGASWIQFDE------PLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADV 262 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDE------P~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~ 262 (387)
.++++.+.++|++++|+|. |.++.. . ..+.. ++..+..-+|+.--|-...++.+.+.++|.
T Consensus 29 ~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G--~----~~v~~-------lr~~~~~DvhLMv~~p~~~i~~~~~aGAd~ 95 (237)
T 3cu2_A 29 NEEVTTLLENQINVLHFDIADGQFSSLFTVG--A----IGIKY-------FPTHCFKDVHLMVRNQLEVAKAVVANGANL 95 (237)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC--T----HHHHT-------SCTTSEEEEEEECSCHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEEEecCccccchhhh--H----HHHHH-------HhhhCCCCeEEEEECHHHHHHHHHHcCCCE
Confidence 3456778889999999996 544432 2 12222 222222256775336566788889999999
Q ss_pred EEEecCCC-C-hhhhHHhhh
Q 016581 263 ITIENSRS-N-ENLLSVFRE 280 (387)
Q Consensus 263 i~lE~~r~-~-~e~L~~~~~ 280 (387)
+.+-.... + .+.++.+++
T Consensus 96 itvH~ea~~~~~~~i~~i~~ 115 (237)
T 3cu2_A 96 VTLQLEQYHDFALTIEWLAK 115 (237)
T ss_dssp EEEETTCTTSHHHHHHHHTT
T ss_pred EEEecCCcccHHHHHHHHHh
Confidence 66552222 3 335555655
No 20
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=94.39 E-value=0.24 Score=44.92 Aligned_cols=136 Identities=13% Similarity=0.189 Sum_probs=78.2
Q ss_pred HHHHHHHHHHcCCCEEEecCc------ccccCCChHHHHHHHHHHHHHH-cCCCCCceEEEEecCCCchhHHHHHHcCCC
Q 016581 188 YKEVVSELKAAGASWIQFDEP------LLVMDLDSHKLQAFIHSFRITN-CGIQDTTQIHTHMCYSNFNDIIHSIIDMDA 260 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDEP------~l~~~l~~~~~~~a~~~~~~~~-~~~~~~~~v~lH~C~gn~~~i~~~l~~l~v 260 (387)
+.++++.+.++|++|+++|=. .++. .+ ..++.++... ..+ ...+|+++. |....++.+.+.++
T Consensus 19 l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~--G~----~~v~~ir~~~~~~~--~~dvhLmv~--~p~~~i~~~~~aGa 88 (228)
T 3ovp_A 19 LGAECLRMLDSGADYLHLDVMDGHFVPNITF--GH----PVVESLRKQLGQDP--FFDMHMMVS--KPEQWVKPMAVAGA 88 (228)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEBSSSSSCBCB--CH----HHHHHHHHHHCSSS--CEEEEEECS--CGGGGHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCcCccccc--CH----HHHHHHHHhhCCCC--cEEEEEEeC--CHHHHHHHHHHcCC
Confidence 456777888999999999832 2332 22 3567776664 344 345677765 66677888899999
Q ss_pred CEEEEecCCC-C-hhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEE-cCCCCCCCCCh-h
Q 016581 261 DVITIENSRS-N-ENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWV-NPDCGLKTRKY-T 336 (387)
Q Consensus 261 D~i~lE~~r~-~-~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~i-sPdCGl~~~~~-~ 336 (387)
|.+++-.... + .+.++.+++ .+..+++- +++.++ ++. ++..+.. .+.+++ +=+.||+.... +
T Consensus 89 d~itvH~Ea~~~~~~~i~~i~~---~G~k~gva-l~p~t~-~e~-------l~~~l~~--~D~Vl~msv~pGf~Gq~f~~ 154 (228)
T 3ovp_A 89 NQYTFHLEATENPGALIKDIRE---NGMKVGLA-IKPGTS-VEY-------LAPWANQ--IDMALVMTVEPGFGGQKFME 154 (228)
T ss_dssp SEEEEEGGGCSCHHHHHHHHHH---TTCEEEEE-ECTTSC-GGG-------TGGGGGG--CSEEEEESSCTTTCSCCCCG
T ss_pred CEEEEccCCchhHHHHHHHHHH---cCCCEEEE-EcCCCC-HHH-------HHHHhcc--CCeEEEeeecCCCCCcccCH
Confidence 9999873222 3 345666766 24444432 233333 222 2222233 244443 44567776432 2
Q ss_pred hHHHHHHHHHH
Q 016581 337 EVKPALSNMVA 347 (387)
Q Consensus 337 ~a~~kL~~lv~ 347 (387)
....|++.+.+
T Consensus 155 ~~l~ki~~lr~ 165 (228)
T 3ovp_A 155 DMMPKVHWLRT 165 (228)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45667666654
No 21
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=94.20 E-value=0.44 Score=43.28 Aligned_cols=137 Identities=18% Similarity=0.275 Sum_probs=75.6
Q ss_pred HHHHHHHHHHcCCCEEEecC------cccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCC
Q 016581 188 YKEVVSELKAAGASWIQFDE------PLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDAD 261 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDE------P~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD 261 (387)
+.++++.+ ++|++|+++|- |.++. .. ..++.++... . ..+-+|+=--|....++.+.+.++|
T Consensus 15 l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~--G~----~~v~~lr~~~-~----~~~dvhLmv~dp~~~i~~~~~aGAd 82 (231)
T 3ctl_A 15 FKEQIEFI-DSHADYFHIDIMDGHFVPNLTL--SP----FFVSQVKKLA-T----KPLDCHLMVTRPQDYIAQLARAGAD 82 (231)
T ss_dssp HHHHHHHH-HTTCSCEEEEEECSSSSSCCCB--CH----HHHHHHHTTC-C----SCEEEEEESSCGGGTHHHHHHHTCS
T ss_pred HHHHHHHH-HcCCCEEEEEEEeCccCccchh--cH----HHHHHHHhcc-C----CcEEEEEEecCHHHHHHHHHHcCCC
Confidence 45677778 89999999994 33332 12 2455555432 2 2334444333666678889999999
Q ss_pred EEEEecCC--CC-hhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEE-EcCCCCCCCCC-hh
Q 016581 262 VITIENSR--SN-ENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILW-VNPDCGLKTRK-YT 336 (387)
Q Consensus 262 ~i~lE~~r--~~-~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~-isPdCGl~~~~-~~ 336 (387)
.+++-... .+ .+.++.+++ .+..+++-+ +..++ ++ +++..++. .+.+. .+=+.||+... .+
T Consensus 83 ~itvh~Ea~~~~~~~~i~~i~~---~G~k~gv~l-np~tp-~~-------~~~~~l~~--~D~VlvmsV~pGfggQ~f~~ 148 (231)
T 3ctl_A 83 FITLHPETINGQAFRLIDEIRR---HDMKVGLIL-NPETP-VE-------AMKYYIHK--ADKITVMTVDPGFAGQPFIP 148 (231)
T ss_dssp EEEECGGGCTTTHHHHHHHHHH---TTCEEEEEE-CTTCC-GG-------GGTTTGGG--CSEEEEESSCTTCSSCCCCT
T ss_pred EEEECcccCCccHHHHHHHHHH---cCCeEEEEE-ECCCc-HH-------HHHHHHhc--CCEEEEeeeccCcCCccccH
Confidence 99876322 23 345666666 245555533 44443 22 22222333 35554 23344554422 24
Q ss_pred hHHHHHHHHHHHHH
Q 016581 337 EVKPALSNMVAATK 350 (387)
Q Consensus 337 ~a~~kL~~lv~~a~ 350 (387)
....|++.+.+..+
T Consensus 149 ~~l~kI~~lr~~~~ 162 (231)
T 3ctl_A 149 EMLDKLAELKAWRE 162 (231)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 66778877766544
No 22
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=92.37 E-value=3.3 Score=38.92 Aligned_cols=146 Identities=12% Similarity=0.179 Sum_probs=77.1
Q ss_pred HHHHHHHHHcCCCEEEecC----cccccCCCh-HHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEE
Q 016581 189 KEVVSELKAAGASWIQFDE----PLLVMDLDS-HKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 263 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDE----P~l~~~l~~-~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i 263 (387)
.+.++++.+.|+++|-|-- |-... .+. +..+..++.++.+.+.. ++.+.+... +. .++..-.+.+++.|
T Consensus 66 ~~~a~~~v~~GAdiIDIGgeStrPga~~-v~~~eE~~RvvpvI~~l~~~~--~vpiSIDT~--~~-~V~~aAl~aGa~iI 139 (297)
T 1tx2_A 66 VRHAKEMRDEGAHIIDIGGESTRPGFAK-VSVEEEIKRVVPMIQAVSKEV--KLPISIDTY--KA-EVAKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHHHTTCSEEEEESCC----CCC-CCHHHHHHHHHHHHHHHHHHS--CSCEEEECS--CH-HHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCCEEEECCCcCCCCCCC-CCHHHHHHHHHHHHHHHHhcC--CceEEEeCC--CH-HHHHHHHHcCCCEE
Confidence 3455677889999999984 33222 222 23344666665555433 456777766 32 45555556699988
Q ss_pred EEecCC-C-ChhhhHHhhhccCCCcccccccccCCCCCCCC-H----HHHHHHHHHHHhh-cCCCcEEEcCCCCCCCCCh
Q 016581 264 TIENSR-S-NENLLSVFREGVQYDAAIGPGVYDIHSPRIPS-T----EEIVDRIYEMRTV-LETNILWVNPDCGLKTRKY 335 (387)
Q Consensus 264 ~lE~~r-~-~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~-~----e~v~~ri~~a~~~-v~~~~l~isPdCGl~~~~~ 335 (387)
. +.+. . +.+.++.+++ + +..+++--.. ..+.-++ . +.+.++++.+.+. ++++++++-|..||+- +.
T Consensus 140 N-dvsg~~~d~~m~~~aa~-~--g~~vVlmh~~-G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk-~~ 213 (297)
T 1tx2_A 140 N-DIWGAKAEPKIAEVAAH-Y--DVPIILMHNR-DNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAK-TP 213 (297)
T ss_dssp E-ETTTTSSCTHHHHHHHH-H--TCCEEEECCC-SCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSC-CH
T ss_pred E-ECCCCCCCHHHHHHHHH-h--CCcEEEEeCC-CCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCC-CH
Confidence 4 2111 1 3445565665 2 2222222111 1222111 2 3445556665543 3567999999999943 44
Q ss_pred hhHHHHHHHHH
Q 016581 336 TEVKPALSNMV 346 (387)
Q Consensus 336 ~~a~~kL~~lv 346 (387)
+....-|+++.
T Consensus 214 ~~n~~ll~~l~ 224 (297)
T 1tx2_A 214 EQNLEAMRNLE 224 (297)
T ss_dssp HHHHHHHHTGG
T ss_pred HHHHHHHHHHH
Confidence 44444444443
No 23
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.35 E-value=0.76 Score=43.44 Aligned_cols=173 Identities=13% Similarity=0.153 Sum_probs=89.5
Q ss_pred HHHHHHHHHcCCCEEEecCcccccCCCh-HHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHc--CCCCEEE-
Q 016581 189 KEVVSELKAAGASWIQFDEPLLVMDLDS-HKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIID--MDADVIT- 264 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~~~l~~-~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~--l~vD~i~- 264 (387)
.+.++++.+.|+++|=|--.. ...+. +..+.+++.+....+.. ++.+.+-.. +. .++..-.+ .+++.|.
T Consensus 40 ~~~A~~~v~~GAdiIDIg~g~--~~v~~~eem~rvv~~i~~~~~~~--~vpisIDT~--~~-~V~eaaL~~~~Ga~iINd 112 (300)
T 3k13_A 40 LSIARQQVEDGALVIDVNMDD--GLLDARTEMTTFLNLIMSEPEIA--RVPVMIDSS--KW-EVIEAGLKCLQGKSIVNS 112 (300)
T ss_dssp HHHHHHHHHTTCSEEEEECCC--TTSCHHHHHHHHHHHHHTCHHHH--TSCEEEECS--CH-HHHHHHHHHCSSCCEEEE
T ss_pred HHHHHHHHHCCCCEEEECCCC--CCCCHHHHHHHHHHHHHHhhhcC--CCeEEEeCC--CH-HHHHHHHHhcCCCCEEEe
Confidence 344566778999998876421 11222 22234444443211111 345555433 33 44554444 4787663
Q ss_pred EecCCCC--h-hhhHHhhhccCCCcccccccccCC-CC-CCCCHHHHHHHHHHHH-hhc--CCCcEEEcCCCC-CCCCCh
Q 016581 265 IENSRSN--E-NLLSVFREGVQYDAAIGPGVYDIH-SP-RIPSTEEIVDRIYEMR-TVL--ETNILWVNPDCG-LKTRKY 335 (387)
Q Consensus 265 lE~~r~~--~-e~L~~~~~~~~~~k~l~lGvvd~~-s~-~ve~~e~v~~ri~~a~-~~v--~~~~l~isPdCG-l~~~~~ 335 (387)
+-....+ + +.+..+++ + +..+++--.|.+ .+ ..+..-++++|+.+++ ... +++++++-|..| |++...
T Consensus 113 Is~~~~d~~~~~~~~l~a~-~--ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~ 189 (300)
T 3k13_A 113 ISLKEGEEVFLEHARIIKQ-Y--GAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIE 189 (300)
T ss_dssp ECSTTCHHHHHHHHHHHHH-H--TCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCG
T ss_pred CCcccCChhHHHHHHHHHH-h--CCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChH
Confidence 1111111 1 34455555 2 334444444321 11 1333446788888885 554 569999999997 876543
Q ss_pred hh---HHHHHHHHHHHHHHH----------HHHhCCC-----cc-ccCCcchhhh
Q 016581 336 TE---VKPALSNMVAATKLL----------RTQLTVP-----RR-LEGSFLSHCA 371 (387)
Q Consensus 336 ~~---a~~kL~~lv~~a~~~----------r~~l~~~-----~~-~~~~~~~~~~ 371 (387)
+. ...-|+++.+..+.+ |..++.+ |. +|..|+.||-
T Consensus 190 ~~~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkSfglp~~~~~R~~~n~~fl~~ai 244 (300)
T 3k13_A 190 EHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAI 244 (300)
T ss_dssp GGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHhCCCCCEEEEECcccccCCCCcchhHHHHHHHHHHHH
Confidence 32 556666655544332 2222323 44 8888888885
No 24
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=92.10 E-value=4.8 Score=37.50 Aligned_cols=146 Identities=14% Similarity=0.174 Sum_probs=79.2
Q ss_pred HHHHHHHHcCCCEEEecC----cccccCCC-hHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEE
Q 016581 190 EVVSELKAAGASWIQFDE----PLLVMDLD-SHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 264 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDE----P~l~~~l~-~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~ 264 (387)
+.++++.+.|+++|=|-- |.... .+ .+..+..++.++.+.+.. ++.+.++.- + ..++..-.+.+++.|.
T Consensus 42 ~~a~~~v~~GAdiIDIGgestrPga~~-v~~~eE~~rv~pvi~~l~~~~--~~piSIDT~--~-~~va~aAl~aGa~iIN 115 (282)
T 1aj0_A 42 KHANLMINAGATIIDVGGESTRPGAAE-VSVEEELQRVIPVVEAIAQRF--EVWISVDTS--K-PEVIRESAKVGAHIIN 115 (282)
T ss_dssp HHHHHHHHHTCSEEEEESSCCSTTCCC-CCHHHHHHHHHHHHHHHHHHC--CCEEEEECC--C-HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCc-CCHHHHHHHHHHHHHHHHhhc--CCeEEEeCC--C-HHHHHHHHHcCCCEEE
Confidence 345677888999998885 32111 22 223445666666655433 457777755 2 2556666677999885
Q ss_pred EecC-CCChhhhHHhhhccCCCcccccccccC--CCC----CCCC-----HHHHHHHHHHHHhh-cCCCcEEEcCCCCCC
Q 016581 265 IENS-RSNENLLSVFREGVQYDAAIGPGVYDI--HSP----RIPS-----TEEIVDRIYEMRTV-LETNILWVNPDCGLK 331 (387)
Q Consensus 265 lE~~-r~~~e~L~~~~~~~~~~k~l~lGvvd~--~s~----~ve~-----~e~v~~ri~~a~~~-v~~~~l~isPdCGl~ 331 (387)
+.+ ..+.+.++.+++ + +..+++=-... .+. .-++ .+.+.++++++.+. ++++++++-|..||+
T Consensus 116 -dvsg~~d~~~~~~~a~-~--~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf~ 191 (282)
T 1aj0_A 116 -DIRSLSEPGALEAAAE-T--GLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFG 191 (282)
T ss_dssp -ETTTTCSTTHHHHHHH-H--TCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSS
T ss_pred -ECCCCCCHHHHHHHHH-h--CCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcc
Confidence 211 123455666665 2 22222211110 110 0111 45566667766654 456799999999995
Q ss_pred CCChhhHHHHHHHHH
Q 016581 332 TRKYTEVKPALSNMV 346 (387)
Q Consensus 332 ~~~~~~a~~kL~~lv 346 (387)
. +.+.-+.-|+++.
T Consensus 192 k-~~~~n~~ll~~l~ 205 (282)
T 1aj0_A 192 K-NLSHNYSLLARLA 205 (282)
T ss_dssp C-CHHHHHHHHHTGG
T ss_pred c-CHHHHHHHHHHHH
Confidence 4 4444444444443
No 25
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=91.97 E-value=1.7 Score=40.38 Aligned_cols=146 Identities=10% Similarity=0.076 Sum_probs=75.4
Q ss_pred HHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcC--CCCEEE-Ee
Q 016581 190 EVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDM--DADVIT-IE 266 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l--~vD~i~-lE 266 (387)
+.++.+.+.|+++|-|---+- ... ..+...+.++.+.+.. ++.+.+-.+ +. .++..-.+. +++.|. +-
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~---~~e-E~~rv~~vi~~l~~~~--~~pisIDT~--~~-~v~~aal~a~~Ga~iINdvs 108 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPT---ADD-PVRVMEWLVKTIQEVV--DLPCCLDST--NP-DAIEAGLKVHRGHAMINSTS 108 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSC---SSC-HHHHHHHHHHHHHHHC--CCCEEEECS--CH-HHHHHHHHHCCSCCEEEEEC
T ss_pred HHHHHHHHCCCCEEEEcCCcC---chh-HHHHHHHHHHHHHHhC--CCeEEEeCC--CH-HHHHHHHHhCCCCCEEEECC
Confidence 344667789999998874331 112 2234555555554433 456666655 33 455555555 788774 22
Q ss_pred cCCCC--hhhhHHhhhccCCCcccccccccCCCCCCCCHHH----HHHHHHHHHhh-cCCCcEEEcCCCCCCCCChhhHH
Q 016581 267 NSRSN--ENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEE----IVDRIYEMRTV-LETNILWVNPDCGLKTRKYTEVK 339 (387)
Q Consensus 267 ~~r~~--~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~----v~~ri~~a~~~-v~~~~l~isPdCGl~~~~~~~a~ 339 (387)
... + .+.+..+++ + +..+++=-.|.+ ..-.|.++ +.++++.+.+. ++++++++.|.+||-..+.+...
T Consensus 109 ~~~-d~~~~~~~~~a~-~--~~~vv~m~~d~~-G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~ 183 (271)
T 2yci_X 109 ADQ-WKMDIFFPMAKK-Y--EAAIIGLTMNEK-GVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHAV 183 (271)
T ss_dssp SCH-HHHHHHHHHHHH-H--TCEEEEESCBTT-BCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHH
T ss_pred CCc-cccHHHHHHHHH-c--CCCEEEEecCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHH
Confidence 111 2 234444555 2 222222222211 11223333 34444444433 35678999999999333445566
Q ss_pred HHHHHHHHHH
Q 016581 340 PALSNMVAAT 349 (387)
Q Consensus 340 ~kL~~lv~~a 349 (387)
.-|+++.+..
T Consensus 184 ~~l~~l~~~~ 193 (271)
T 2yci_X 184 EVLETIRQIK 193 (271)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 6666665553
No 26
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=91.53 E-value=1.9 Score=38.87 Aligned_cols=141 Identities=17% Similarity=0.284 Sum_probs=70.1
Q ss_pred HHHHHHHHHcCCCEEEecCccccc--CCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe
Q 016581 189 KEVVSELKAAGASWIQFDEPLLVM--DLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~~--~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE 266 (387)
.++++.+.++|+++||+|...-.+ ++.-.. ..+..++..+ +..+.+|+---|-+..++.+.+.++|++++-
T Consensus 20 ~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~--~~v~~lr~~~-----~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh 92 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVMDGRFVPNITIGP--LIVDAIRPLT-----KKTLDVHLMIVEPEKYVEDFAKAGADIISVH 92 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCH--HHHHHHGGGC-----CSEEEEEEESSSGGGTHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEEEecCCCcchhhhH--HHHHHHHhhc-----CCcEEEEEEccCHHHHHHHHHHcCCCEEEEC
Confidence 356677788999999999732211 011001 2333443222 2345566654454456788899999999776
Q ss_pred cC--CCC--hhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEE-EcCCCCCCCC-ChhhHHH
Q 016581 267 NS--RSN--ENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILW-VNPDCGLKTR-KYTEVKP 340 (387)
Q Consensus 267 ~~--r~~--~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~-isPdCGl~~~-~~~~a~~ 340 (387)
.. ..+ .+.++.+++ .++.+++-+ +.+++ . ++++..++. .+-++ .+=..|++.. .......
T Consensus 93 ~e~~~~~~~~~~~~~i~~---~g~~~gv~~-~p~t~-~-------e~~~~~~~~--~D~v~~msv~pg~ggq~~~~~~~~ 158 (230)
T 1tqj_A 93 VEHNASPHLHRTLCQIRE---LGKKAGAVL-NPSTP-L-------DFLEYVLPV--CDLILIMSVNPGFGGQSFIPEVLP 158 (230)
T ss_dssp CSTTTCTTHHHHHHHHHH---TTCEEEEEE-CTTCC-G-------GGGTTTGGG--CSEEEEESSCC----CCCCGGGHH
T ss_pred cccccchhHHHHHHHHHH---cCCcEEEEE-eCCCc-H-------HHHHHHHhc--CCEEEEEEeccccCCccCcHHHHH
Confidence 43 222 345555555 244444433 33443 1 122222222 24442 2223333332 2345677
Q ss_pred HHHHHHHHHH
Q 016581 341 ALSNMVAATK 350 (387)
Q Consensus 341 kL~~lv~~a~ 350 (387)
||+.+.+...
T Consensus 159 ~i~~lr~~~~ 168 (230)
T 1tqj_A 159 KIRALRQMCD 168 (230)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777666554
No 27
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=89.06 E-value=14 Score=34.24 Aligned_cols=146 Identities=11% Similarity=0.120 Sum_probs=76.7
Q ss_pred HHHHHHHHcCCCEEEecC----cccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEE
Q 016581 190 EVVSELKAAGASWIQFDE----PLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDE----P~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~l 265 (387)
+.++.+.+.|+++|=|-- |.....-..+..+..++.++.+.+. ++.|.++.. + ..++..-.+.+++.|.
T Consensus 33 ~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~---~~piSIDT~--~-~~va~aAl~aGa~iIN- 105 (280)
T 1eye_A 33 KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ---GITVSIDTM--R-ADVARAALQNGAQMVN- 105 (280)
T ss_dssp HHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT---TCCEEEECS--C-HHHHHHHHHTTCCEEE-
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC---CCEEEEeCC--C-HHHHHHHHHcCCCEEE-
Confidence 345678889999998884 2211111122334566776665543 456777655 2 2566666677999885
Q ss_pred ecCC-C-ChhhhHHhhhccCCCccccccccc--CCC-----CCCCC-----HHHHHHHHHHHHhh-cCCCcEEEcCCCCC
Q 016581 266 ENSR-S-NENLLSVFREGVQYDAAIGPGVYD--IHS-----PRIPS-----TEEIVDRIYEMRTV-LETNILWVNPDCGL 330 (387)
Q Consensus 266 E~~r-~-~~e~L~~~~~~~~~~k~l~lGvvd--~~s-----~~ve~-----~e~v~~ri~~a~~~-v~~~~l~isPdCGl 330 (387)
+.+. . +.+.++.+++ + +..+++--.. ..+ +.-++ .+.+.++++.+.+. ++++++++-|..||
T Consensus 106 dvsg~~~d~~m~~~~a~-~--~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf 182 (280)
T 1eye_A 106 DVSGGRADPAMGPLLAE-A--DVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGF 182 (280)
T ss_dssp ETTTTSSCTTHHHHHHH-H--TCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS
T ss_pred ECCCCCCCHHHHHHHHH-h--CCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCCc
Confidence 2111 1 3445666665 2 2223322221 111 11122 44556666666654 45679999999888
Q ss_pred CCCChhhHHHHHHHHH
Q 016581 331 KTRKYTEVKPALSNMV 346 (387)
Q Consensus 331 ~~~~~~~a~~kL~~lv 346 (387)
+- +.+..+.-|+++.
T Consensus 183 ~k-~~~~n~~ll~~l~ 197 (280)
T 1eye_A 183 AK-TAQHNWAILHALP 197 (280)
T ss_dssp SC-CHHHHHHHHHTHH
T ss_pred cc-CHHHHHHHHHHHH
Confidence 75 4344444444443
No 28
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=87.87 E-value=1.5 Score=39.67 Aligned_cols=138 Identities=12% Similarity=0.235 Sum_probs=71.3
Q ss_pred HHHHHHHHHHcCCCEEEecC------cccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCC
Q 016581 188 YKEVVSELKAAGASWIQFDE------PLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDAD 261 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDE------P~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD 261 (387)
+.++++.+.++|++|+|+|- |.++. .. ..+..++... | +..+-.|+---|-...++.+.+ +|
T Consensus 20 l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~--G~----~~v~~lr~~~---p-~~~~dvhLmv~dp~~~i~~~~~--Ad 87 (227)
T 1tqx_A 20 LAEETQRMESLGAEWIHLDVMDMHFVPNLSF--GP----PVINNLKKYT---K-SIFFDVHLMVEYPEKYVPLLKT--SN 87 (227)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSSSSSCBCC--CH----HHHHHHGGGC---S-SCEEEEEEESSCGGGGGGGCTT--SS
T ss_pred HHHHHHHHHHcCCCEEEEEEEeCCcCcchhc--CH----HHHHHHHHhC---C-CCcEEEEEEEcCHHHHHHHHHh--CC
Confidence 34566777889999999996 33332 12 2455554332 1 2355566654454445566655 77
Q ss_pred EEEEe--cCCCC-hhhhH---HhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEE-EcCCCCCCCCC
Q 016581 262 VITIE--NSRSN-ENLLS---VFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILW-VNPDCGLKTRK 334 (387)
Q Consensus 262 ~i~lE--~~r~~-~e~L~---~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~-isPdCGl~~~~ 334 (387)
.+++- ....+ .+.++ .+++ .+..+++-+ +..++ + +.++..++.-..+.+. .+=+.||+...
T Consensus 88 ~itvH~ea~~~~~~~~i~~~~~i~~---~G~k~gval-np~tp-~-------~~~~~~l~~g~~D~VlvmsV~pGf~gq~ 155 (227)
T 1tqx_A 88 QLTFHFEALNEDTERCIQLAKEIRD---NNLWCGISI-KPKTD-V-------QKLVPILDTNLINTVLVMTVEPGFGGQS 155 (227)
T ss_dssp EEEEEGGGGTTCHHHHHHHHHHHHT---TTCEEEEEE-CTTSC-G-------GGGHHHHTTTCCSEEEEESSCTTCSSCC
T ss_pred EEEEeecCCccCHHHHHHHHHHHHH---cCCeEEEEe-CCCCc-H-------HHHHHHhhcCCcCEEEEeeeccCCCCcc
Confidence 77554 43323 34566 6666 355555533 44444 2 2233333300134552 23344555432
Q ss_pred -hhhHHHHHHHHHHHH
Q 016581 335 -YTEVKPALSNMVAAT 349 (387)
Q Consensus 335 -~~~a~~kL~~lv~~a 349 (387)
.+....|++.+.+..
T Consensus 156 f~~~~l~ki~~lr~~~ 171 (227)
T 1tqx_A 156 FMHDMMGKVSFLRKKY 171 (227)
T ss_dssp CCGGGHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHhc
Confidence 245677777665543
No 29
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=86.67 E-value=5.5 Score=35.48 Aligned_cols=87 Identities=18% Similarity=0.245 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEec-
Q 016581 189 KEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIEN- 267 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~- 267 (387)
.+.++.+.++|+++||+|..-.............+..++.. . +..+.+|+=--|-...++.+.+.++|++.+-.
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~---~--~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH---T--KAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTT---C--CSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhh---c--CCcEEEEEEecCHHHHHHHHHHcCCCEEEECCC
Confidence 34566677899999999953221100000000123333322 2 22445555433544567888889999996653
Q ss_pred -CCCC-hhhhHHhhh
Q 016581 268 -SRSN-ENLLSVFRE 280 (387)
Q Consensus 268 -~r~~-~e~L~~~~~ 280 (387)
.... .+.++.+++
T Consensus 97 ~~~~~~~~~~~~i~~ 111 (228)
T 1h1y_A 97 VSRDNWQELIQSIKA 111 (228)
T ss_dssp GCTTTHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHH
Confidence 2222 334566655
No 30
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=86.48 E-value=4.6 Score=39.02 Aligned_cols=94 Identities=12% Similarity=0.118 Sum_probs=57.7
Q ss_pred CceEEEEecC-C-CchhHHHHHHcC-CCC--EEEEe-cCC--CChhhhHHhhhccCCCccccccccc---CC--CCCCCC
Q 016581 236 TTQIHTHMCY-S-NFNDIIHSIIDM-DAD--VITIE-NSR--SNENLLSVFREGVQYDAAIGPGVYD---IH--SPRIPS 302 (387)
Q Consensus 236 ~~~v~lH~C~-g-n~~~i~~~l~~l-~vD--~i~lE-~~r--~~~e~L~~~~~~~~~~k~l~lGvvd---~~--s~~ve~ 302 (387)
+..|++|+.+ | ...+++..|.+. +++ .+.+- ..+ .+++....+.+ .|-.|+++-+- +. +...++
T Consensus 193 glPV~iH~~r~~~a~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~---~G~~I~~~g~g~~~tf~~~~~~~~ 269 (365)
T 3rhg_A 193 YASMNIHMPGWQRRGDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLD---RGVWLEFDMIGLDISFPKEGAAPS 269 (365)
T ss_dssp TCEEEEECCTTSCCHHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHH---TTCEEEECCTTCCCBCSSSCBCCC
T ss_pred CCcEEEECCCCCcCHHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHh---CCCEEEecCCCccccccccccccc
Confidence 4579999733 2 234667777655 554 34332 222 35666555544 25566666441 11 011345
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEcCCCCCCC
Q 016581 303 TEEIVDRIYEMRTVLETNILWVNPDCGLKT 332 (387)
Q Consensus 303 ~e~v~~ri~~a~~~v~~~~l~isPdCGl~~ 332 (387)
-+.-++.++++++..+.+|+.+++||+..+
T Consensus 270 d~~~a~~l~~li~~g~~drilleTD~p~l~ 299 (365)
T 3rhg_A 270 VMDTVEAVATLIERGYGNQIVLSHDVFLKQ 299 (365)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEECCCCCSGG
T ss_pred hHHHHHHHHHHHHhCCCCcEEEeCCCCCCC
Confidence 666788899999999999999999998743
No 31
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=83.13 E-value=6.4 Score=37.98 Aligned_cols=93 Identities=11% Similarity=0.140 Sum_probs=57.9
Q ss_pred CceEEEEec-CCC-chhHHHHHHcCCCC--EEEE-ecCC-C-ChhhhHHhhhccCCCcccccccccCC--CC----CCCC
Q 016581 236 TTQIHTHMC-YSN-FNDIIHSIIDMDAD--VITI-ENSR-S-NENLLSVFREGVQYDAAIGPGVYDIH--SP----RIPS 302 (387)
Q Consensus 236 ~~~v~lH~C-~gn-~~~i~~~l~~l~vD--~i~l-E~~r-~-~~e~L~~~~~~~~~~k~l~lGvvd~~--s~----~ve~ 302 (387)
+..|.+|+. +|+ ..+++..|.+.+++ .+.+ -..+ . +++....+.+ .|-.|+++-+-+. -+ +.++
T Consensus 203 glPV~iH~~gr~~a~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~---~G~~I~f~g~gt~~~f~~~~~~~~~ 279 (364)
T 3k2g_A 203 GLPLMVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQ---RGAFLEFDMIGMDFFYADQGVQCPS 279 (364)
T ss_dssp CCCEEEECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHH---HTCEEEECCTTCCCEETTTTEECCC
T ss_pred CCeEEEecCCCCccHHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHh---CCcEEEecCCccccccccccccccc
Confidence 446899963 433 34677777666654 3333 2222 2 5665555544 1456666544221 01 1356
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEcCCCCCC
Q 016581 303 TEEIVDRIYEMRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 303 ~e~v~~ri~~a~~~v~~~~l~isPdCGl~ 331 (387)
-++-++.++++++..+.+|+.+++||...
T Consensus 280 d~~ra~~l~~lv~~gp~drilleTD~p~~ 308 (364)
T 3k2g_A 280 DDEVARAILGLADHGYLDRILLSHDVFVK 308 (364)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEECCCCCSG
T ss_pred HHHHHHHHHHHHHhCCcccEEEeCCCCCC
Confidence 66778899999999999999999999753
No 32
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=82.92 E-value=25 Score=31.81 Aligned_cols=108 Identities=15% Similarity=0.103 Sum_probs=57.3
Q ss_pred HHHHHcCCCEEEecCcccc-----cCCChH-HHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe
Q 016581 193 SELKAAGASWIQFDEPLLV-----MDLDSH-KLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 193 ~~L~~aG~~~IQiDEP~l~-----~~l~~~-~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE 266 (387)
+++.+.|+++||+-|+... ..++.. ..+.+.... .+.... ++.+.+| .+ ++....+++|++++.
T Consensus 50 ~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~-~l~~~~--~~~liIn---d~----~~lA~~~gAdGVHLg 119 (243)
T 3o63_A 50 EAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILA-DAAHRY--GALFAVN---DR----ADIARAAGADVLHLG 119 (243)
T ss_dssp HHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHH-HHHHHT--TCEEEEE---SC----HHHHHHHTCSEEEEC
T ss_pred HHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHH-HHHHhh--CCEEEEe---CH----HHHHHHhCCCEEEec
Confidence 3445789999999998732 112332 333333333 333333 4467776 12 344567799999998
Q ss_pred cCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcC
Q 016581 267 NSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNP 326 (387)
Q Consensus 267 ~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isP 326 (387)
........++.+. +.++.+++- +.|++++....+ .+++=+.++|
T Consensus 120 ~~dl~~~~~r~~~---~~~~~iG~S--------~ht~~Ea~~A~~-----~GaDyI~vgp 163 (243)
T 3o63_A 120 QRDLPVNVARQIL---APDTLIGRS--------THDPDQVAAAAA-----GDADYFCVGP 163 (243)
T ss_dssp TTSSCHHHHHHHS---CTTCEEEEE--------ECSHHHHHHHHH-----SSCSEEEECC
T ss_pred CCcCCHHHHHHhh---CCCCEEEEe--------CCCHHHHHHHhh-----CCCCEEEEcC
Confidence 5332333333332 223344332 355666443322 4567777776
No 33
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=80.77 E-value=13 Score=35.02 Aligned_cols=91 Identities=13% Similarity=0.022 Sum_probs=53.0
Q ss_pred CceEEEEec---CCCchhHHHHHHcCCCC--EEEEecC--CCChhhhHHhhhccCCCcccccccccCCCC----------
Q 016581 236 TTQIHTHMC---YSNFNDIIHSIIDMDAD--VITIENS--RSNENLLSVFREGVQYDAAIGPGVYDIHSP---------- 298 (387)
Q Consensus 236 ~~~v~lH~C---~gn~~~i~~~l~~l~vD--~i~lE~~--r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~---------- 298 (387)
+..|.+|.. +... ++++.|.+.+++ .+.+..+ ..+.+.+..+.+ .+-.++++.+-.-+-
T Consensus 161 glPv~iH~~~~~r~a~-e~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~---~G~~i~~~~~G~~tf~~~~~~~~~~ 236 (330)
T 2ob3_A 161 GVPVTTHTAASQRDGE-QQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAA---RGYLIGLDHIPYSAIGLEDNASASA 236 (330)
T ss_dssp CCCEEEECCGGGTHHH-HHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHH---TTCEEEECCTTCCCTTCTTCHHHHH
T ss_pred CCeEEEECCCCCCCHH-HHHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHh---CCCEEEeCCCccccccccccccccc
Confidence 347889974 2222 556666665654 3333322 235665555544 244555553111110
Q ss_pred --CCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCC
Q 016581 299 --RIPSTEEIVDRIYEMRTVLETNILWVNPDCGL 330 (387)
Q Consensus 299 --~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl 330 (387)
.+.+.+.-++.++++++.+|.+++.+++||+.
T Consensus 237 ~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~ 270 (330)
T 2ob3_A 237 LLGIRSWQTRALLIKALIDQGYMKQILVSNDWTF 270 (330)
T ss_dssp HHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 01344455677999999999999999999986
No 34
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=78.15 E-value=29 Score=30.02 Aligned_cols=138 Identities=10% Similarity=0.184 Sum_probs=67.1
Q ss_pred HHHHHHHHHcCCCEEEecCcccc--cCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe
Q 016581 189 KEVVSELKAAGASWIQFDEPLLV--MDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~--~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE 266 (387)
.+.++.+.++|+++||++.--.+ ..+.... ..+..++ +.. +..+.+|+---|....++.+.++++|.+.+.
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~--~~i~~i~---~~~--~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh 91 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGA--DVVASMR---KHS--KLVFDCHLMVVDPERYVEAFAQAGADIMTIH 91 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCH--HHHHHHH---TTC--CSEEEEEEESSSGGGGHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCH--HHHHHHH---HhC--CCCEEEEEeecCHHHHHHHHHHcCCCEEEEc
Confidence 34556677889999999952222 1111001 1222332 222 2345556553344444688889999999876
Q ss_pred cCC-CCh-hhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEE-cCCCCCCCCCh-hhHHHHH
Q 016581 267 NSR-SNE-NLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWV-NPDCGLKTRKY-TEVKPAL 342 (387)
Q Consensus 267 ~~r-~~~-e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~i-sPdCGl~~~~~-~~a~~kL 342 (387)
... ... +.++.+++ .+..+++.+ +++++ ++..+.+ ... .+.+++ +.+.|+.+.+. .....++
T Consensus 92 ~~~~~~~~~~~~~~~~---~g~~i~~~~-~~~t~-----~e~~~~~---~~~--~d~vl~~~~~~g~~g~~~~~~~~~~i 157 (220)
T 2fli_A 92 TESTRHIHGALQKIKA---AGMKAGVVI-NPGTP-----ATALEPL---LDL--VDQVLIMTVNPGFGGQAFIPECLEKV 157 (220)
T ss_dssp GGGCSCHHHHHHHHHH---TTSEEEEEE-CTTSC-----GGGGGGG---TTT--CSEEEEESSCTTCSSCCCCGGGHHHH
T ss_pred cCccccHHHHHHHHHH---cCCcEEEEE-cCCCC-----HHHHHHH---Hhh--CCEEEEEEECCCCcccccCHHHHHHH
Confidence 322 222 34455554 244555554 44332 1111111 111 344433 77778876532 2233445
Q ss_pred HHHHH
Q 016581 343 SNMVA 347 (387)
Q Consensus 343 ~~lv~ 347 (387)
+.+.+
T Consensus 158 ~~~~~ 162 (220)
T 2fli_A 158 ATVAK 162 (220)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 35
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=77.20 E-value=23 Score=33.56 Aligned_cols=127 Identities=13% Similarity=0.021 Sum_probs=70.8
Q ss_pred cCCCEEEecCcccccC-CChHHHHHHHHHHHHHHcCCCCCceEEEEecCCC-chhHHHHHHcCCCC--EEEEe-cCC-CC
Q 016581 198 AGASWIQFDEPLLVMD-LDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSN-FNDIIHSIIDMDAD--VITIE-NSR-SN 271 (387)
Q Consensus 198 aG~~~IQiDEP~l~~~-l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn-~~~i~~~l~~l~vD--~i~lE-~~r-~~ 271 (387)
.|++...| |-.+... ......+.....++.+.+ . +..|.+|...|. -.+.++.|.+.+++ .+.+- ..+ .+
T Consensus 151 tg~k~g~I-Eigld~~~~~~~q~~~f~aq~~lA~~-~--glPViiH~~~gr~a~~~~~iL~~~~~~~~~~vi~H~~~~~~ 226 (339)
T 3gtx_A 151 TGIRAGVI-KLASSRDAITPYEQLFFRAAARVQRE-T--GVPIITHTQEGQQGPQQAELLTSLGADPARIMIGHMDGNTD 226 (339)
T ss_dssp SSCCCSEE-EEECCSSCCCHHHHHHHHHHHHHHHH-H--CCCEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCC
T ss_pred cCcccceE-EEEcCCCCCCHHHHHHHHHHHHHHHH-H--CCeEEEeCCCCcCHHHHHHHHHHcCCCcccEEEEccCCCCC
Confidence 34544555 6555542 222223334444444433 2 446899986432 12456666666554 33332 222 35
Q ss_pred hhhhHHhhhccCCCcccccccccCC-CCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCC
Q 016581 272 ENLLSVFREGVQYDAAIGPGVYDIH-SPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 272 ~e~L~~~~~~~~~~k~l~lGvvd~~-s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~ 331 (387)
++....+-+ .+-.|+++-+-+. ....++-..-++.++++++..+.+++.+++||...
T Consensus 227 ~e~a~~~l~---~G~~i~~~g~~t~~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p~~ 284 (339)
T 3gtx_A 227 PAYHRETLR---HGVSIAFDRIGLQGMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSIWH 284 (339)
T ss_dssp HHHHHHHHT---TTCEEEECCTTCCSSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEE
T ss_pred HHHHHHHHH---cCcEEEEccCccccccCCCchHHHHHHHHHHHHhcCCCeEEEecCCCcc
Confidence 666655544 2556777554221 11123433567888999999999999999999964
No 36
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=76.88 E-value=51 Score=33.60 Aligned_cols=135 Identities=14% Similarity=0.151 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecC--------C-CchhHH
Q 016581 182 PKILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCY--------S-NFNDII 252 (387)
Q Consensus 182 ~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~--------g-n~~~i~ 252 (387)
+++.+.|++.++.|.++|++++-+. +. ..-...+.++.+++....++ ++.+.++. | ++...+
T Consensus 122 ~e~~~~~~~qi~~l~~~gvD~l~~E----T~-~~~~Ea~aa~~a~~~~~~~~----Pv~vS~t~~~~g~~~~G~~~~~~~ 192 (566)
T 1q7z_A 122 EEFYENFRETVEIMVEEGVDGIIFE----TF-SDILELKAAVLAAREVSRDV----FLIAHMTFDEKGRSLTGTDPANFA 192 (566)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEE----EE-CCHHHHHHHHHHHHHHCSSS----CEEEEECCCTTSCCTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEe----cc-CCHHHHHHHHHHHHHhCCCC----cEEEEEEEcCCCeeCCCCcHHHHH
Confidence 6788899999999999999998776 11 11122234566665543344 44444442 2 244677
Q ss_pred HHHHcCCCCEEEEecCCC-C--hhhhHHhhhccCCCccccccccc---------CCCCCCCCHHHHHHHHHHHHhhcCCC
Q 016581 253 HSIIDMDADVITIENSRS-N--ENLLSVFREGVQYDAAIGPGVYD---------IHSPRIPSTEEIVDRIYEMRTVLETN 320 (387)
Q Consensus 253 ~~l~~l~vD~i~lE~~r~-~--~e~L~~~~~~~~~~k~l~lGvvd---------~~s~~ve~~e~v~~ri~~a~~~v~~~ 320 (387)
..+.+.+++++.+--+.. + ...++.+.+ .....+++.. ....+-++|++.++.+++..+. .
T Consensus 193 ~~l~~~~~~avG~NC~~gp~~~~~~l~~l~~----~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~---G 265 (566)
T 1q7z_A 193 ITFDELDIDALGINCSLGPEEILPIFQELSQ----YTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYEL---G 265 (566)
T ss_dssp HHHHTSSCSEEEEESSSCHHHHHHHHHHHHH----TCCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHT---T
T ss_pred HHhhccCCCEEEEeCCCCHHHHHHHHHHHHh----cCCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHc---C
Confidence 888889999999984332 1 223444443 1123344443 2223457899988888886654 3
Q ss_pred cEEEcCCCCCCC
Q 016581 321 ILWVNPDCGLKT 332 (387)
Q Consensus 321 ~l~isPdCGl~~ 332 (387)
--+|.=-||-.+
T Consensus 266 ~~iiGGCCGTtP 277 (566)
T 1q7z_A 266 VNIFGGCCGTTP 277 (566)
T ss_dssp CSEECCCTTCCH
T ss_pred CcEEccccCCCH
Confidence 447888899764
No 37
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=75.78 E-value=54 Score=30.90 Aligned_cols=146 Identities=12% Similarity=0.094 Sum_probs=70.7
Q ss_pred HHHHHHHHcCCCEEEecC----cccccCCCh-HHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEE
Q 016581 190 EVVSELKAAGASWIQFDE----PLLVMDLDS-HKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 264 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDE----P~l~~~l~~-~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~ 264 (387)
+..+++.+.|+++|=|-- |. .. .+. +..+..++.++.+.+..+ ++.|.+-.- +. .++..-.+.++|.|.
T Consensus 69 ~~A~~~v~~GAdIIDIGgeSTrPG-~~-v~~~eEl~Rv~pvI~~l~~~~~-~vpISIDT~--~~-~VaeaAl~aGa~iIN 142 (318)
T 2vp8_A 69 DAVHRAVADGADVIDVGGVKAGPG-ER-VDVDTEITRLVPFIEWLRGAYP-DQLISVDTW--RA-QVAKAACAAGADLIN 142 (318)
T ss_dssp HHHHHHHHTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHST-TCEEEEECS--CH-HHHHHHHHHTCCEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCC-CC-CCHHHHHHHHHHHHHHHHhhCC-CCeEEEeCC--CH-HHHHHHHHhCCCEEE
Confidence 345678889999998884 44 22 232 233456666655554332 345555332 32 456665666999774
Q ss_pred EecC-CCChhhhHHhhhccCCCccccccccc---CCCCC-CCC------------HHHHHHHHHHHHhh-cCCCcEEEcC
Q 016581 265 IENS-RSNENLLSVFREGVQYDAAIGPGVYD---IHSPR-IPS------------TEEIVDRIYEMRTV-LETNILWVNP 326 (387)
Q Consensus 265 lE~~-r~~~e~L~~~~~~~~~~k~l~lGvvd---~~s~~-ve~------------~e~v~~ri~~a~~~-v~~~~l~isP 326 (387)
+.+ ..+.+.+..+++ + +..+++=-.. .++.+ ..+ .+.+.++++.+.+. ++++++++-|
T Consensus 143 -DVsg~~d~~m~~vaa~-~--g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDP 218 (318)
T 2vp8_A 143 -DTWGGVDPAMPEVAAE-F--GAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDP 218 (318)
T ss_dssp -ETTSSSSTTHHHHHHH-H--TCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEET
T ss_pred -ECCCCCchHHHHHHHH-h--CCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcC
Confidence 211 113445665665 2 2222221111 11110 000 13344455555543 3567999999
Q ss_pred CCCCCCCChhhHHHHHHHHH
Q 016581 327 DCGLKTRKYTEVKPALSNMV 346 (387)
Q Consensus 327 dCGl~~~~~~~a~~kL~~lv 346 (387)
..||+- +.+.-+.-|+++.
T Consensus 219 G~GF~K-t~~~nl~ll~~l~ 237 (318)
T 2vp8_A 219 AHDFGK-NTFHGLLLLRHVA 237 (318)
T ss_dssp TTTCCT-TSHHHHHHHHTHH
T ss_pred CCCccc-CHHHHHHHHHHHH
Confidence 999965 3333344444433
No 38
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=74.90 E-value=37 Score=31.00 Aligned_cols=147 Identities=11% Similarity=0.071 Sum_probs=70.2
Q ss_pred HHHHHHHHHHcCCCEEEecCcccccCCCh-HHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcC--CCCEEE
Q 016581 188 YKEVVSELKAAGASWIQFDEPLLVMDLDS-HKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDM--DADVIT 264 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDEP~l~~~l~~-~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l--~vD~i~ 264 (387)
..+.++.+.+.|+++|-|---. ...+. +..+.+++.+.. .. ++.+.+-.+ +. .++..-.+. +++.|.
T Consensus 27 a~~~a~~~v~~GAdiIDIg~g~--~~v~~~ee~~rvv~~i~~---~~--~~pisIDT~--~~-~v~~aAl~a~~Ga~iIN 96 (262)
T 1f6y_A 27 VQEWARRQEEGGARALDLNVGP--AVQDKVSAMEWLVEVTQE---VS--NLTLCLDST--NI-KAIEAGLKKCKNRAMIN 96 (262)
T ss_dssp HHHHHHHHHHHTCSEEEEBCC------CHHHHHHHHHHHHHT---TC--CSEEEEECS--CH-HHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHCCCcEEEECCCC--CCCChHHHHHHHHHHHHH---hC--CCeEEEeCC--CH-HHHHHHHhhCCCCCEEE
Confidence 3345566778899999987411 11112 122234444432 22 556666555 33 445544444 788774
Q ss_pred -EecCCCCh-hhhHHhhhccCCCcccccccccCCCCCCCCH----HHHHHHHHHHHhh-cCCCcEEEcCCCC-CCCCChh
Q 016581 265 -IENSRSNE-NLLSVFREGVQYDAAIGPGVYDIHSPRIPST----EEIVDRIYEMRTV-LETNILWVNPDCG-LKTRKYT 336 (387)
Q Consensus 265 -lE~~r~~~-e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~----e~v~~ri~~a~~~-v~~~~l~isPdCG-l~~~~~~ 336 (387)
+-....++ +.+..+++ + +..+++=-.+.+ ..-.+. +...++++.+.+. ++++++++-|..| |+. +.+
T Consensus 97 dvs~~~d~~~~~~~~~a~-~--~~~vvlmh~~~~-G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg~g~~g~-~~~ 171 (262)
T 1f6y_A 97 STNAEREKVEKLFPLAVE-H--GAALIGLTMNKT-GIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLILPANV-AQD 171 (262)
T ss_dssp EECSCHHHHHHHHHHHHH-T--TCEEEEESCCSS-CSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCCTTT-CTT
T ss_pred ECCCCcccHHHHHHHHHH-h--CCcEEEEcCCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCCCCcCCC-ChH
Confidence 21111112 34454555 2 222222112111 011222 3334455555443 4567999999998 554 334
Q ss_pred hHHHHHHHHHHHH
Q 016581 337 EVKPALSNMVAAT 349 (387)
Q Consensus 337 ~a~~kL~~lv~~a 349 (387)
.....|+++.+..
T Consensus 172 ~~~~~l~~l~~l~ 184 (262)
T 1f6y_A 172 HAPEVLKTLQQIK 184 (262)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5556665555443
No 39
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=72.26 E-value=11 Score=38.45 Aligned_cols=65 Identities=12% Similarity=0.058 Sum_probs=38.2
Q ss_pred HHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEec
Q 016581 190 EVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIEN 267 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~ 267 (387)
+.++++.+.|+++||+.|+.+.. .+..+.+.... .+.... ++.+.+| + -++...++++|++++..
T Consensus 29 ~~ve~al~~Gv~~vQlR~K~~~~---~~~~~~a~~l~-~l~~~~--~v~liIN----D---~~dlA~~~gAdGVHLgq 93 (540)
T 3nl6_A 29 GQVEAGLQNGVTLVQIREKDADT---KFFIEEALQIK-ELCHAH--NVPLIIN----D---RIDVAMAIGADGIHVGQ 93 (540)
T ss_dssp HHHHHHHHTTCSEEEECCSSSCT---THHHHHHHHHH-HHHHHT--TCCEEEC----S---CSHHHHHTTCSEEEECT
T ss_pred HHHHHHHHCCCCEEEEecCCCCH---HHHHHHHHHHH-HHHHhc--CCEEEEe----C---cHHHHHHcCCCEEEECh
Confidence 33445567899999999998653 23333333333 333332 3455565 1 14455677888888863
No 40
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=70.60 E-value=74 Score=30.39 Aligned_cols=91 Identities=16% Similarity=0.143 Sum_probs=55.8
Q ss_pred CceEEEEecCCCch-hHHHHHHcCCCC--EEEEe-cC-CCChhhhHHhhhccCCCcccccccccC-CCCCCCCHHHHHHH
Q 016581 236 TTQIHTHMCYSNFN-DIIHSIIDMDAD--VITIE-NS-RSNENLLSVFREGVQYDAAIGPGVYDI-HSPRIPSTEEIVDR 309 (387)
Q Consensus 236 ~~~v~lH~C~gn~~-~i~~~l~~l~vD--~i~lE-~~-r~~~e~L~~~~~~~~~~k~l~lGvvd~-~s~~ve~~e~v~~r 309 (387)
+..|.+|.-.+.-. ..+..|.+.++| .+.+- .. ..+.+.++.+-+ .+-.|.+.-+=. .....++-++-++.
T Consensus 206 G~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~l~---~G~yl~fD~iG~~~~~~~p~d~~r~~~ 282 (360)
T 3tn4_A 206 GAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRKTLA---YGVYIAFDRFGIQGMVGAPTDEERVRT 282 (360)
T ss_dssp CCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHT---TTCEEEECCTTCCCSTTCCCHHHHHHH
T ss_pred CCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCCCHHHHHHHHH---cCCEEEEcccccccccCCCChHHHHHH
Confidence 56888997654321 456667777665 34432 11 235666655544 244555432211 11224556677888
Q ss_pred HHHHHhhcCCCcEEEcCCCC
Q 016581 310 IYEMRTVLETNILWVNPDCG 329 (387)
Q Consensus 310 i~~a~~~v~~~~l~isPdCG 329 (387)
|++.++..+.+|+.|+.||.
T Consensus 283 l~~lv~~g~~drILLstDa~ 302 (360)
T 3tn4_A 283 LLALLRDGYEKQIMLSHDTV 302 (360)
T ss_dssp HHHHHHTTCGGGEEECCCCE
T ss_pred HHHHHHhcCcceEEEecCCC
Confidence 99999999999999999993
No 41
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=69.64 E-value=53 Score=28.09 Aligned_cols=66 Identities=18% Similarity=0.147 Sum_probs=39.7
Q ss_pred HHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEec
Q 016581 189 KEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIEN 267 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~ 267 (387)
.+.++.+.++|+++||+++|.... .... ..+..+....... ++.+.++ .-++...++++|++.+..
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~---~~~~-~~~~~l~~~~~~~--~v~v~v~-------~~~~~a~~~gad~v~l~~ 94 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPT---REMY-EIGKTLRQLTREY--DALFFVD-------DRVDVALAVDADGVQLGP 94 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCH---HHHH-HHHHHHHHHHHHT--TCEEEEE-------SCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHCCCCEEEECCCCCCH---HHHH-HHHHHHHHHHHHc--CCeEEEc-------ChHHHHHHcCCCEEEECC
Confidence 355667788999999999886432 1122 2233333333332 3444443 225667788999999874
No 42
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=67.88 E-value=22 Score=30.85 Aligned_cols=108 Identities=13% Similarity=0.106 Sum_probs=57.0
Q ss_pred HHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecC
Q 016581 189 KEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~ 268 (387)
.+.++.+.+.|+++||++++... . .+.++.+.+..+..+.++.=.++. ..-++...+.++|++.+..
T Consensus 22 ~~~~~~~~~~G~~~i~l~~~~~~-----~-----~~~i~~i~~~~~~~l~vg~g~~~~--~~~i~~a~~~Gad~V~~~~- 88 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEIPLNSPQ-----W-----EQSIPAIVDAYGDKALIGAGTVLK--PEQVDALARMGCQLIVTPN- 88 (212)
T ss_dssp HHHHHHHHHHTCCEEEEETTSTT-----H-----HHHHHHHHHHHTTTSEEEEECCCS--HHHHHHHHHTTCCEEECSS-
T ss_pred HHHHHHHHHCCCCEEEEeCCChh-----H-----HHHHHHHHHhCCCCeEEEeccccC--HHHHHHHHHcCCCEEEeCC-
Confidence 34556677789999999987521 1 122222222222233443222221 2346777889999998553
Q ss_pred CCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcC
Q 016581 269 RSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNP 326 (387)
Q Consensus 269 r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isP 326 (387)
.+.+.++..++ + +..+.+| +.|++++. ++. ..+.+-+.+.|
T Consensus 89 -~~~~~~~~~~~-~--g~~~~~g--------~~t~~e~~----~a~-~~G~d~v~v~~ 129 (212)
T 2v82_A 89 -IHSEVIRRAVG-Y--GMTVCPG--------CATATEAF----TAL-EAGAQALKIFP 129 (212)
T ss_dssp -CCHHHHHHHHH-T--TCEEECE--------ECSHHHHH----HHH-HTTCSEEEETT
T ss_pred -CCHHHHHHHHH-c--CCCEEee--------cCCHHHHH----HHH-HCCCCEEEEec
Confidence 23455555554 2 3345556 24566642 222 24566666644
No 43
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=67.68 E-value=9.8 Score=33.90 Aligned_cols=65 Identities=8% Similarity=0.117 Sum_probs=37.5
Q ss_pred HHHHHcCCCEEEecCccccc-CCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe
Q 016581 193 SELKAAGASWIQFDEPLLVM-DLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 193 ~~L~~aG~~~IQiDEP~l~~-~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE 266 (387)
+.+.++|+++|++++..... .... . +.+..+.+.. ++++.+|.---+. .-++.+.+.++|.+.+-
T Consensus 39 ~~~~~~Gad~i~v~~~d~~~~~~~~-----~-~~i~~i~~~~--~ipv~v~ggI~~~-~~~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 39 LAWQRSGAEWLHLVDLDAAFGTGDN-----R-ALIAEVAQAM--DIKVELSGGIRDD-DTLAAALATGCTRVNLG 104 (244)
T ss_dssp HHHHHTTCSEEEEEEHHHHHTSCCC-----H-HHHHHHHHHC--SSEEEEESSCCSH-HHHHHHHHTTCSEEEEC
T ss_pred HHHHHcCCCEEEEecCchhhcCCCh-----H-HHHHHHHHhc--CCcEEEECCcCCH-HHHHHHHHcCCCEEEEC
Confidence 55677899999998733221 1111 1 2233333333 3466666432233 33667778899999886
No 44
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=67.10 E-value=84 Score=29.50 Aligned_cols=145 Identities=10% Similarity=0.184 Sum_probs=72.2
Q ss_pred HHHHHHHHHcCCCEEEecC-cccccC------CCh-HHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCC
Q 016581 189 KEVVSELKAAGASWIQFDE-PLLVMD------LDS-HKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDA 260 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDE-P~l~~~------l~~-~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~v 260 (387)
.+.++++.+.|+++|=|-- ..-... ++. +..+..++.++.+.+.. ++.|.+-.. +. .++..-.+.++
T Consensus 52 l~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~--~vpISIDT~--~~-~Va~aAl~aGa 126 (314)
T 3tr9_A 52 LRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF--PQLISVDTS--RP-RVMREAVNTGA 126 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC--CSEEEEECS--CH-HHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC--CCeEEEeCC--CH-HHHHHHHHcCC
Confidence 3445678889999998873 222110 111 12233555555444333 445655433 32 45555556689
Q ss_pred CEEEEecCCC-ChhhhHHhhhccCCCcccccccccCC-CCCC----C-------CHHHHHHHHHHHHhh-cCCCcEEEcC
Q 016581 261 DVITIENSRS-NENLLSVFREGVQYDAAIGPGVYDIH-SPRI----P-------STEEIVDRIYEMRTV-LETNILWVNP 326 (387)
Q Consensus 261 D~i~lE~~r~-~~e~L~~~~~~~~~~k~l~lGvvd~~-s~~v----e-------~~e~v~~ri~~a~~~-v~~~~l~isP 326 (387)
|.|. +.+.. +.+.++.+++ + +..+++ ...+ .|.. + -.+.+.++++.+.+. ++++++++-|
T Consensus 127 ~iIN-DVsg~~~~~m~~v~a~-~--g~~vVl--Mh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDP 200 (314)
T 3tr9_A 127 DMIN-DQRALQLDDALTTVSA-L--KTPVCL--MHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDP 200 (314)
T ss_dssp CEEE-ETTTTCSTTHHHHHHH-H--TCCEEE--ECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CEEE-ECCCCCchHHHHHHHH-h--CCeEEE--ECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeC
Confidence 8774 21111 2345555655 2 222322 1211 2211 1 133445566665544 4567999999
Q ss_pred CCC---CCCCChhhHHHHHHHH
Q 016581 327 DCG---LKTRKYTEVKPALSNM 345 (387)
Q Consensus 327 dCG---l~~~~~~~a~~kL~~l 345 (387)
..| |+- +.+.-+.-|+++
T Consensus 201 G~G~~~F~K-t~~~n~~lL~~l 221 (314)
T 3tr9_A 201 GFGQGNYGK-NVSENFYLLNKL 221 (314)
T ss_dssp CCCSGGGCC-CHHHHHHHHHTT
T ss_pred CCCchhhcC-CHHHHHHHHHHH
Confidence 888 764 333334444443
No 45
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=64.91 E-value=51 Score=31.55 Aligned_cols=91 Identities=12% Similarity=0.049 Sum_probs=52.0
Q ss_pred CceEEEEecCCC-chhHHHHHHcCCCC--EEEEe-cCC-CChhhhHHhh-hccCCCcccccccccCCCCCCCCHHHHHHH
Q 016581 236 TTQIHTHMCYSN-FNDIIHSIIDMDAD--VITIE-NSR-SNENLLSVFR-EGVQYDAAIGPGVYDIHSPRIPSTEEIVDR 309 (387)
Q Consensus 236 ~~~v~lH~C~gn-~~~i~~~l~~l~vD--~i~lE-~~r-~~~e~L~~~~-~~~~~~k~l~lGvvd~~s~~ve~~e~v~~r 309 (387)
+..|++|.-.|. -.++++.|.+.+++ .+.+- ..+ .+.+....+- + .+-.|+++-+-+ ... .+.+.-++.
T Consensus 182 glPViiH~r~gr~a~d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~---~G~yI~f~g~~~-~~~-~~~~~ra~~ 256 (363)
T 3ovg_A 182 GCPILVHTQLGTMALEVAKHLIGFGANPDKIQISHLNKNPDKYYYEKVIKE---TGVTLCFDGPDR-VKY-YPDSLLAEN 256 (363)
T ss_dssp CCCEEEEEETTCSHHHHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHH---HCCEEEECCTTC-TTT-CCHHHHHHH
T ss_pred CCEEEEeCCCCCCHHHHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHH---CCcEEEECCeec-ccc-CChhHHHHH
Confidence 446889975431 12566666654544 33332 222 2444433333 3 144566553321 111 123456778
Q ss_pred HHHHHhhcCCCcEEEcCCCCCC
Q 016581 310 IYEMRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 310 i~~a~~~v~~~~l~isPdCGl~ 331 (387)
++++++..+.+|+.+++||...
T Consensus 257 l~~lv~~~p~drILleTDap~~ 278 (363)
T 3ovg_A 257 IKYLVDKGLQKHITLSLDAGRI 278 (363)
T ss_dssp HHHHHHTTCGGGEEECCCCCSG
T ss_pred HHHHHHhcCCCeEEEeCCCCCC
Confidence 9999999999999999999854
No 46
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=64.82 E-value=90 Score=28.98 Aligned_cols=133 Identities=12% Similarity=0.165 Sum_probs=70.8
Q ss_pred HHHHHHHHcCCCEEEecC----cccccCCCh-HHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEE
Q 016581 190 EVVSELKAAGASWIQFDE----PLLVMDLDS-HKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 264 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDE----P~l~~~l~~-~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~ 264 (387)
+.++++.+.|+++|=|-- |.... ++. +..+..++.++.+.+. ++.|.+-.. +. .++..-.+.+++.|.
T Consensus 50 ~~a~~~v~~GAdiIDIGgeSTrPga~~-v~~~eE~~Rv~pvi~~l~~~---~vpiSIDT~--~~-~Va~aAl~aGa~iIN 122 (294)
T 2y5s_A 50 RRAERMIAEGADLLDIGGESTRPGAPP-VPLDEELARVIPLVEALRPL---NVPLSIDTY--KP-AVMRAALAAGADLIN 122 (294)
T ss_dssp HHHHHHHHTTCSEEEEESSCCSTTCCC-CCHHHHHHHHHHHHHHHGGG---CSCEEEECC--CH-HHHHHHHHHTCSEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCC-CCHHHHHHHHHHHHHHHhhC---CCeEEEECC--CH-HHHHHHHHcCCCEEE
Confidence 345678889999998885 33222 232 2344567777665542 445555433 32 456555566898885
Q ss_pred EecCC-CChhhhHHhhhccCCCccccccccc--CCC-----CCCCC-----HHHHHHHHHHHHhh-cCCCcEEEcCCCCC
Q 016581 265 IENSR-SNENLLSVFREGVQYDAAIGPGVYD--IHS-----PRIPS-----TEEIVDRIYEMRTV-LETNILWVNPDCGL 330 (387)
Q Consensus 265 lE~~r-~~~e~L~~~~~~~~~~k~l~lGvvd--~~s-----~~ve~-----~e~v~~ri~~a~~~-v~~~~l~isPdCGl 330 (387)
+.+. .+.+.+..+++ + +..+++--.. ..+ +.-++ .+.+.++++.+.+. ++++++++-|..||
T Consensus 123 -dVsg~~d~~m~~~~a~-~--~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf 198 (294)
T 2y5s_A 123 -DIWGFRQPGAIDAVRD-G--NSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGF 198 (294)
T ss_dssp -ETTTTCSTTHHHHHSS-S--SCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS
T ss_pred -ECCCCCchHHHHHHHH-h--CCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcc
Confidence 2111 13345555555 2 3222221111 111 11123 34445566666543 35679999998888
Q ss_pred CCC
Q 016581 331 KTR 333 (387)
Q Consensus 331 ~~~ 333 (387)
+-.
T Consensus 199 ~kt 201 (294)
T 2y5s_A 199 GKA 201 (294)
T ss_dssp SSC
T ss_pred ccc
Confidence 643
No 47
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=64.20 E-value=97 Score=29.19 Aligned_cols=141 Identities=9% Similarity=0.094 Sum_probs=71.9
Q ss_pred HHHHHHHH-HcCCCEEEec-C---cccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCch---hHHHHHHcCCC
Q 016581 189 KEVVSELK-AAGASWIQFD-E---PLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFN---DIIHSIIDMDA 260 (387)
Q Consensus 189 ~~~i~~L~-~aG~~~IQiD-E---P~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~---~i~~~l~~l~v 260 (387)
.+..+.+. +.|+++|-|- | |... ....+. ..+.++.+.+.+ ++.+.+--| ||-+ .+++.-++...
T Consensus 83 ~~~A~~~v~~~GAdiIDIg~eStrP~~~-~vs~ee---~~~~V~~v~~~~--~vPlsIDg~-~~~T~~~eV~eaAleaga 155 (323)
T 4djd_D 83 GRWAQKCVAEYGADLIYLKLDGADPEGA-NHSVDQ---CVATVKEVLQAV--GVPLVVVGC-GDVEKDHEVLEAVAEAAA 155 (323)
T ss_dssp HHHHHHHHHTTCCSEEEEECGGGCTTTT-CCCHHH---HHHHHHHHHHHC--CSCEEEECC-SCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEEcCccCCCCCC-CCCHHH---HHHHHHHHHhhC--CceEEEECC-CCCCCCHHHHHHHHHhcC
Confidence 34444455 8899998884 3 3221 122222 222334443433 567888888 7754 34444444443
Q ss_pred C----EEEEecCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhh-cCCCcEEEcCCCC-CCCCC
Q 016581 261 D----VITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTV-LETNILWVNPDCG-LKTRK 334 (387)
Q Consensus 261 D----~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~-v~~~~l~isPdCG-l~~~~ 334 (387)
+ +-++-..+ ..+.+....+ + +..+++-- . .+.+.+.++++.+.+. ++++++++.|.+| |+. +
T Consensus 156 g~~~lINsv~~~~-~~~m~~laa~-~--g~~vVlmh--~-----~d~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk-~ 223 (323)
T 4djd_D 156 GENLLLGNAEQEN-YKSLTAACMV-H--KHNIIARS--P-----LDINICKQLNILINEMNLPLDHIVIDPSIGGLGY-G 223 (323)
T ss_dssp TSCCEEEEEBTTB-CHHHHHHHHH-H--TCEEEEEC--S-----SCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTT-T
T ss_pred CCCCeEEECCccc-HHHHHHHHHH-h--CCeEEEEc--c-----chHHHHHHHHHHHHHcCCCHHHEEEeCCCccccC-C
Confidence 3 33333211 2234455555 2 22232211 1 1345555555555544 4569999999999 665 4
Q ss_pred hhhHHHHHHHHHHH
Q 016581 335 YTEVKPALSNMVAA 348 (387)
Q Consensus 335 ~~~a~~kL~~lv~~ 348 (387)
.+....-|+++.++
T Consensus 224 ~e~~l~~l~~ir~~ 237 (323)
T 4djd_D 224 IEYSFSIMERIRLG 237 (323)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45555555555544
No 48
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=64.02 E-value=52 Score=32.51 Aligned_cols=148 Identities=11% Similarity=0.137 Sum_probs=69.2
Q ss_pred HHHHHHHHHcCCCEEEecC----cccccCCCh-HHHHHHHHHHHHHHc---CCCCCceEEEEecCCCchhHHHHHHc--C
Q 016581 189 KEVVSELKAAGASWIQFDE----PLLVMDLDS-HKLQAFIHSFRITNC---GIQDTTQIHTHMCYSNFNDIIHSIID--M 258 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDE----P~l~~~l~~-~~~~~a~~~~~~~~~---~~~~~~~v~lH~C~gn~~~i~~~l~~--l 258 (387)
.+.++++.+.|+++|=|-- |.... ++. +..+..++.++.+.+ ..+.++.|.+-.. +. .++..-.+ .
T Consensus 215 l~~A~~mv~~GAdIIDIGgeSTrPGa~~-Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~--~~-~VaeaAL~~~a 290 (442)
T 3mcm_A 215 KLNLDELIQSGAEIIDIGAESTKPDAKP-ISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTR--KL-EVMQKILAKHH 290 (442)
T ss_dssp HHHHHHHHHHTCSEEEEECCCCCC-----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECC--CH-HHHHHHHHHHG
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCC-CCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCC--CH-HHHHHHHhhCC
Confidence 3445667788999998873 32221 222 233445666655544 2211445555433 32 45555555 6
Q ss_pred CCCE-EEEe-cCCCChhhhHHhhhccCCCcccccccccCC-CC----------CCCC-HHHHHHHHHHHHhh-cCCCcEE
Q 016581 259 DADV-ITIE-NSRSNENLLSVFREGVQYDAAIGPGVYDIH-SP----------RIPS-TEEIVDRIYEMRTV-LETNILW 323 (387)
Q Consensus 259 ~vD~-i~lE-~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~-s~----------~ve~-~e~v~~ri~~a~~~-v~~~~l~ 323 (387)
+++. |. + +...+.+.++.+++ + +..+++ ...+ .| .+++ .+.+.++++.+.+. +++++++
T Consensus 291 Ga~i~IN-DVsg~~d~~m~~v~a~-~--g~~vVl--Mh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~Ii 364 (442)
T 3mcm_A 291 DIIWMIN-DVECNNIEQKAQLIAK-Y--NKKYVI--IHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIY 364 (442)
T ss_dssp GGCCEEE-ECCCTTHHHHHHHHHH-H--TCEEEE--ECC----------------CTHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred CCCEEEE-cCCCCCChHHHHHHHH-h--CCeEEE--ECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 7887 53 2 11113345555665 2 333332 2211 11 1222 44556677777665 5669999
Q ss_pred EcCCCCCCCCChhhHHHHHHHHHH
Q 016581 324 VNPDCGLKTRKYTEVKPALSNMVA 347 (387)
Q Consensus 324 isPdCGl~~~~~~~a~~kL~~lv~ 347 (387)
+-|.-||+- +.+....-|+++.+
T Consensus 365 lDPGiGF~K-t~~~nl~lL~~l~~ 387 (442)
T 3mcm_A 365 FDIGFGFGK-KSDTARYLLENIIE 387 (442)
T ss_dssp EECCCC-------------CCHHH
T ss_pred EeCCCCCCC-CHHHHHHHHHHHHH
Confidence 999888864 32333444444433
No 49
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=61.66 E-value=96 Score=28.27 Aligned_cols=76 Identities=14% Similarity=0.158 Sum_probs=42.7
Q ss_pred HHHHHHHHHHcCCCEEEecCcccccCCChHHHHH--------------HHHHHHHHHcC-CCCCceEEEEecCCC-----
Q 016581 188 YKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQA--------------FIHSFRITNCG-IQDTTQIHTHMCYSN----- 247 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~--------------a~~~~~~~~~~-~~~~~~v~lH~C~gn----- 247 (387)
..+.++.|.++|+++|-|+=|.--...++...|. ..+.++.+-+. . ++.+++- +|-|
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~--~~Pivlm-~Y~npv~~~ 110 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHP--DMPIGLL-LYANLVFAN 110 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT--TCCEEEE-ECHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC--CCCEEEE-ecCcHHHHh
Confidence 4567788999999999999776221122332221 12333332222 2 3455553 3323
Q ss_pred -chhHHHHHHcCCCCEEEEe
Q 016581 248 -FNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 248 -~~~i~~~l~~l~vD~i~lE 266 (387)
++..+..+.+.++|++.+-
T Consensus 111 g~e~f~~~~~~aGvdgvii~ 130 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLIA 130 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEET
T ss_pred hHHHHHHHHHHcCCCEEEeC
Confidence 2345666778899998765
No 50
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=61.40 E-value=95 Score=29.15 Aligned_cols=142 Identities=11% Similarity=-0.017 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHH-HcCCCEEEecCcccccC-CChHHHHHHHHHHHHHHcCCCCCceEEEEecCCC-chhHHHHHHcC
Q 016581 182 PKILPIYKEVVSELK-AAGASWIQFDEPLLVMD-LDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSN-FNDIIHSIIDM 258 (387)
Q Consensus 182 ~~la~~~~~~i~~L~-~aG~~~IQiDEP~l~~~-l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn-~~~i~~~l~~l 258 (387)
+++++.+..++..-. ..|++-=.| |-.+.+. ..+...+.....++.+.+- +..|++|.-.|. -...++.|.+.
T Consensus 129 e~l~~~~~~ei~~Gi~~t~vkaGvI-EiGld~~~~~~~q~~~f~aq~~~A~~~---glPViiH~r~g~~a~~~l~iL~e~ 204 (330)
T 3pnz_A 129 DKLTEFVVNEVENGLEGTPYKAGQV-KFGTGYNMITPLEEKTIRAVARAHHET---KAPIHSHTEAGTMALEQIEILKQE 204 (330)
T ss_dssp HHHHHHHHHHHHTCSTTSSCCEEEE-EEECBTTBCCHHHHHHHHHHHHHHHHH---CCCEEEECGGGCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhCCCcCcCcCeE-EEEcCCCCCCHHHHHHHHHHHHHHHHH---CCeEEEeCCCCcChHHHHHHHHHc
Confidence 455556655554432 234442112 3333322 2222223344444443321 446899955331 23456777666
Q ss_pred CCC--EEEEecC-C-CChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCC
Q 016581 259 DAD--VITIENS-R-SNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKT 332 (387)
Q Consensus 259 ~vD--~i~lE~~-r-~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~ 332 (387)
+++ .+.+-.+ + .+++.+..+-+ .+-.|+++-+-+-+ ..+.++-++.++++++..+.+|+.+++||+..+
T Consensus 205 ~~~~~~vvi~H~~~s~~~e~a~~~l~---~G~~i~~~g~~t~~--~~~~~~~~~~l~~lv~~g~~drilleTD~p~~~ 277 (330)
T 3pnz_A 205 NIPLEYLSIGHMDRNLDPYYHKQVAK---TGAFMSFDGIAKIK--YAPESARIAAILYLVSEGFEDQILVSGDTARKT 277 (330)
T ss_dssp TCCGGGEEETTGGGSCCHHHHHHHHT---TTCEEEECCTTCTT--TCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGG
T ss_pred CCCCCeEEEecCCCCCCHHHHHHHHH---cCcEEEEccCcccC--CCChHHHHHHHHHHHHcCCCCeEEEeCCCCCCC
Confidence 654 3444322 2 35666555544 24556665432211 112344677788889988999999999998743
No 51
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=61.34 E-value=81 Score=27.28 Aligned_cols=105 Identities=10% Similarity=0.099 Sum_probs=54.0
Q ss_pred HHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCC
Q 016581 192 VSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSN 271 (387)
Q Consensus 192 i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~ 271 (387)
++.+.++|+++||++++.+.. .+.. ..+..+... +.+.. .+.++ +-++...+.++|++++......
T Consensus 35 ~~~~~~~G~~~v~lr~~~~~~---~~~~-~~~~~l~~~--~~~~~-~l~v~-------~~~~~a~~~gad~v~l~~~~~~ 100 (221)
T 1yad_A 35 IIITIQNEVDFIHIRERSKSA---ADIL-KLLDLIFEG--GIDKR-KLVMN-------GRVDIALFSTIHRVQLPSGSFS 100 (221)
T ss_dssp HHHHHGGGCSEEEECCTTSCH---HHHH-HHHHHHHHT--TCCGG-GEEEE-------SCHHHHHTTTCCEEEECTTSCC
T ss_pred HHHHHHCCCCEEEEccCCCCH---HHHH-HHHHHHHHh--cCcCC-eEEEe-------ChHHHHHHcCCCEEEeCCCccC
Confidence 455667899999999876432 1122 222222221 22222 34443 2257778999999999743222
Q ss_pred hhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCC
Q 016581 272 ENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPD 327 (387)
Q Consensus 272 ~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPd 327 (387)
.+.++.+.. + +.+|+ +++ +++++.. +. ..+++-+.+.|-
T Consensus 101 ~~~~~~~~~----~--~~ig~-sv~-----t~~~~~~----a~-~~gaD~i~~~~~ 139 (221)
T 1yad_A 101 PKQIRARFP----H--LHIGR-SVH-----SLEEAVQ----AE-KEDADYVLFGHV 139 (221)
T ss_dssp HHHHHHHCT----T--CEEEE-EEC-----SHHHHHH----HH-HTTCSEEEEECC
T ss_pred HHHHHHHCC----C--CEEEE-EcC-----CHHHHHH----HH-hCCCCEEEECCc
Confidence 333333211 2 33443 322 4555432 22 245677777763
No 52
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=59.76 E-value=1.1e+02 Score=28.51 Aligned_cols=69 Identities=14% Similarity=0.241 Sum_probs=38.4
Q ss_pred HHHHHHHHcCCCEEEecC----cccccCCC-hHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEE
Q 016581 190 EVVSELKAAGASWIQFDE----PLLVMDLD-SHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVIT 264 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDE----P~l~~~l~-~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~ 264 (387)
+..+++.+.|+++|=|-- |.... ++ .+..+..++.++.+.+.. ++.|.+-.. + ..++..-.+.+++.|.
T Consensus 37 ~~a~~~v~~GAdIIDIGgeSTrPGa~~-v~~~eE~~Rv~pvI~~l~~~~--~vpiSIDT~--~-~~Va~aAl~aGa~iIN 110 (314)
T 2vef_A 37 QQARKLIAEGASMLDIGGESTRPGSSY-VEIEEEIQRVVPVIKAIRKES--DVLISIDTW--K-SQVAEAALAAGADLVN 110 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCC-----CH-HHHHHHHHHHHHHHHHHHHHC--CCEEEEECS--C-HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCC-CCHHHHHHHHHHHHHHHHhhC--CceEEEeCC--C-HHHHHHHHHcCCCEEE
Confidence 355778899999998875 32111 11 122334556655544332 445555433 2 2566666677999885
No 53
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=57.98 E-value=1.2e+02 Score=28.40 Aligned_cols=140 Identities=10% Similarity=0.126 Sum_probs=77.2
Q ss_pred HHHHHHHHHcCCCEEEec--------CcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEe--cCCCchhHHHHHHcC
Q 016581 189 KEVVSELKAAGASWIQFD--------EPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHM--CYSNFNDIIHSIIDM 258 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiD--------EP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~--C~gn~~~i~~~l~~l 258 (387)
.+.++.|.++|++.|.+= .|.+.....+. .+.++.+.+.++ ++.+.+.. ++++ ..-++...+.
T Consensus 33 ~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~-----~e~l~~i~~~~~-~~~i~~l~~p~~~~-~~~i~~a~~a 105 (345)
T 1nvm_A 33 RAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTD-----LEYIEAVAGEIS-HAQIATLLLPGIGS-VHDLKNAYQA 105 (345)
T ss_dssp HHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCH-----HHHHHHHHTTCS-SSEEEEEECBTTBC-HHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCH-----HHHHHHHHhhCC-CCEEEEEecCCccc-HHHHHHHHhC
Confidence 345566777899999992 34432211222 223444444444 34554432 4444 3446666678
Q ss_pred CCCEEEEecCCCChh----hhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCCCC
Q 016581 259 DADVITIENSRSNEN----LLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRK 334 (387)
Q Consensus 259 ~vD~i~lE~~r~~~e----~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~~~ 334 (387)
++|.+.+-..-++.+ ..+..++ .+..+...+-|+. .-+++.+.+..+.+.+. ++..+.+.---|..+
T Consensus 106 Gvd~v~I~~~~s~~~~~~~~i~~ak~---~G~~v~~~~~~a~---~~~~e~~~~ia~~~~~~-Ga~~i~l~DT~G~~~-- 176 (345)
T 1nvm_A 106 GARVVRVATHCTEADVSKQHIEYARN---LGMDTVGFLMMSH---MIPAEKLAEQGKLMESY-GATCIYMADSGGAMS-- 176 (345)
T ss_dssp TCCEEEEEEETTCGGGGHHHHHHHHH---HTCEEEEEEESTT---SSCHHHHHHHHHHHHHH-TCSEEEEECTTCCCC--
T ss_pred CcCEEEEEEeccHHHHHHHHHHHHHH---CCCEEEEEEEeCC---CCCHHHHHHHHHHHHHC-CCCEEEECCCcCccC--
Confidence 999988874433333 2333444 2445555555553 33567777777666554 778888887777764
Q ss_pred hhhHHHHHHH
Q 016581 335 YTEVKPALSN 344 (387)
Q Consensus 335 ~~~a~~kL~~ 344 (387)
+.....-++.
T Consensus 177 P~~v~~lv~~ 186 (345)
T 1nvm_A 177 MNDIRDRMRA 186 (345)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444443333
No 54
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=56.18 E-value=1.3e+02 Score=28.08 Aligned_cols=143 Identities=8% Similarity=-0.008 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHcCCCEEEecC----cccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCch---hHHHHHHcCC
Q 016581 187 IYKEVVSELKAAGASWIQFDE----PLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFN---DIIHSIIDMD 259 (387)
Q Consensus 187 ~~~~~i~~L~~aG~~~IQiDE----P~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~---~i~~~l~~l~ 259 (387)
...+..+.+.+.|+++|-|-- |... ..+.+. ..+.++.+.+.. ++.+.+- +.||-+ .+++.-.+..
T Consensus 75 ~~~~~A~~~v~~GAdiIDIg~~StrP~~~-~vs~ee---e~~vV~~v~~~~--~vplsI~-DT~~~~~~~~V~eaal~ag 147 (310)
T 2h9a_B 75 DPVAWAKKCVEYGADIVALRLVSAHPDGQ-NRSGAE---LAEVCKAVADAI--DVPLMII-GCGVEEKDAEIFPVIGEAL 147 (310)
T ss_dssp CHHHHHHHHHHTTCSEEEEECGGGCTTTT-CCCHHH---HHHHHHHHHHHC--SSCEEEE-CCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCcEEEEeCccCCCCCC-CCCHHH---HHHHHHHHHHhC--CceEEEE-CCCCCCCCHHHHHHHHHhC
Confidence 344555666689999988764 3321 122322 122333333333 3444441 334533 4566666667
Q ss_pred CC---EE-EEecCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhh-cCCCcEEEcCCCCC-CCC
Q 016581 260 AD---VI-TIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTV-LETNILWVNPDCGL-KTR 333 (387)
Q Consensus 260 vD---~i-~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~-v~~~~l~isPdCGl-~~~ 333 (387)
++ .| ++-.. .+.+.+....+ + +..+++-- .. +.+.+.++++.+.+. ++++++++.|.+|+ +.
T Consensus 148 a~~k~iINdvs~~-~~~~~~~~aa~-~--g~~vv~m~--~~-----dv~~l~~~~~~a~~~Gi~~e~IilDPg~g~~g~- 215 (310)
T 2h9a_B 148 SGRNCLLSSATKD-NYKPIVATCMV-H--GHSVVASA--PL-----DINLSKQLNIMIMEMNLAPNRIIMDPLIGALGY- 215 (310)
T ss_dssp TTSCCEEEEECTT-THHHHHHHHHH-H--TCEEEEEC--SS-----CHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTT-
T ss_pred CCCCCEEEECCCC-ccHHHHHHHHH-h--CCCEEEEC--hh-----HHHHHHHHHHHHHHCCCChhhEEEeCCCccccC-
Confidence 76 43 23221 12334444454 2 32233211 11 356777777777654 45699999999995 54
Q ss_pred ChhhHHHHHHHHHHH
Q 016581 334 KYTEVKPALSNMVAA 348 (387)
Q Consensus 334 ~~~~a~~kL~~lv~~ 348 (387)
..+.....+..+..+
T Consensus 216 ~~e~~~~~l~~ir~~ 230 (310)
T 2h9a_B 216 GIEYSYSIIERMRLG 230 (310)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred chHhHHHHHHHHHHh
Confidence 333344555555554
No 55
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=55.56 E-value=90 Score=27.80 Aligned_cols=135 Identities=7% Similarity=0.043 Sum_probs=66.5
Q ss_pred HHHHHHHHcCCCEEEecCcccc-cCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecC
Q 016581 190 EVVSELKAAGASWIQFDEPLLV-MDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~-~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~ 268 (387)
++++.+.+.|++-|.+---.-. ..+..+ ...+.+..+.+ . ++.|.+|.-..++..+...+.+.++.++.....
T Consensus 96 ~el~~~~~~g~~Gi~~~~~~~~~~~~~~~---~~~~~~~~a~~-~--~lpv~iH~~~~~~~~~~~~~~~~pl~~vi~H~g 169 (288)
T 2ffi_A 96 ATLAEMARLGVRGVRLNLMGQDMPDLTGA---QWRPLLERIGE-Q--GWHVELHRQVADIPVLVRALQPYGLDIVIDHFG 169 (288)
T ss_dssp HHHHHHHTTTCCEEECCCSSSCCCCTTST---TTHHHHHHHHH-H--TCEEEECSCTTTHHHHHHHHTTTTCCEEESGGG
T ss_pred HHHHHHHHCCCeEEEEecccCCCCCcccH---HHHHHHHHHHH-C--CCeEEEeechhhHHHHHHHHHHCCCCEEEECCC
Confidence 5666676778886655321100 111111 12333333322 1 457888866444556677777777554332321
Q ss_pred CCCh------hhhHHhhhccCCCcccccc---cccCCCCC-CCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCC
Q 016581 269 RSNE------NLLSVFREGVQYDAAIGPG---VYDIHSPR-IPSTEEIVDRIYEMRTVLETNILWVNPDCGLKT 332 (387)
Q Consensus 269 r~~~------e~L~~~~~~~~~~k~l~lG---vvd~~s~~-ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~ 332 (387)
.... ..++.+.+ +.....+.++ ++.. +.. -.+.......++.+++.+|++|++..+|+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~-l~~~~n~y~~~sg~~~~-~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~~ 241 (288)
T 2ffi_A 170 RPDARRGLGQPGFAELLT-LSGRGKVWVKVSGIYRL-QGSPEENLAFARQALCALEAHYGAERLMWGSDWPHTQ 241 (288)
T ss_dssp SCCTTSCTTCTTHHHHTT-CCCCSCEEEEEECGGGS-SSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCTT
T ss_pred CCCCCCCCCChhHHHHHH-HHhCCCEEEEeCcchhh-ccccCCCHHHHHHHHHHHHHHhCCCceEEecCCCCCC
Confidence 1110 01222222 1101122222 2221 111 011234456788899999999999999998865
No 56
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=53.99 E-value=50 Score=28.88 Aligned_cols=84 Identities=15% Similarity=0.317 Sum_probs=44.9
Q ss_pred HHHHHHHHHcCCCEEEecC---cccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEE
Q 016581 189 KEVVSELKAAGASWIQFDE---PLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDE---P~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~l 265 (387)
.+.++.+.++|+++||++. |+... +.... ..+..++ +.. +..+.+|+-.-+....++.+.++++|++.+
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~-~~~~~--~~i~~l~---~~~--~~~~~v~l~vnd~~~~v~~~~~~Gad~v~v 97 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPN-ITIGP--LVVDSLR---PIT--DLPLDVHLMIVEPDQRVPDFIKAGADIVSV 97 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSC-BCCCH--HHHHHHG---GGC--CSCEEEEEESSSHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccc-cccCH--HHHHHHH---hcc--CCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 3456667788999999974 33211 11101 1222232 222 224455655334334577778899999988
Q ss_pred ecC--CC-C-hhhhHHhhh
Q 016581 266 ENS--RS-N-ENLLSVFRE 280 (387)
Q Consensus 266 E~~--r~-~-~e~L~~~~~ 280 (387)
... .. . .+.++.+++
T Consensus 98 h~~~~~~~~~~~~~~~~~~ 116 (230)
T 1rpx_A 98 HCEQSSTIHLHRTINQIKS 116 (230)
T ss_dssp ECSTTTCSCHHHHHHHHHH
T ss_pred EecCccchhHHHHHHHHHH
Confidence 754 32 2 234555554
No 57
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=51.69 E-value=75 Score=30.01 Aligned_cols=90 Identities=10% Similarity=0.116 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCc-----------cccc--C-CChHH---HHHHHHHHHHHHcCCCCCce
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDEP-----------LLVM--D-LDSHK---LQAFIHSFRITNCGIQDTTQ 238 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP-----------~l~~--~-l~~~~---~~~a~~~~~~~~~~~~~~~~ 238 (387)
+.+| ++++.+.|.+..+...++|++.|+|.-- .... + ..... .+.+.+.+..+.+.++++..
T Consensus 143 t~~e-I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~p 221 (349)
T 3hgj_A 143 DEAG-MERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELP 221 (349)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCce
Confidence 4444 5678888888888889999999999853 2110 0 01111 13455566555555655544
Q ss_pred EEEEecC------C-C---chhHHHHHHcCCCCEEEEe
Q 016581 239 IHTHMCY------S-N---FNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 239 v~lH~C~------g-n---~~~i~~~l~~l~vD~i~lE 266 (387)
|++=+.. | + +..++..|.+.++|.|++-
T Consensus 222 V~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 222 LFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp EEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 5554442 1 1 1246677788899999875
No 58
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=51.25 E-value=58 Score=28.88 Aligned_cols=84 Identities=13% Similarity=0.167 Sum_probs=48.3
Q ss_pred HHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecCC
Q 016581 190 EVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSR 269 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r 269 (387)
+.++++.+.|+++||+.+-.. . +.+.++.+.+..+ ++.++.....- .+-++...+.++|.+... .
T Consensus 33 ~~~~al~~gGv~~iel~~k~~-----~-----~~~~i~~l~~~~~-~l~vgaGtvl~--~d~~~~A~~aGAd~v~~p--~ 97 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITFRSE-----A-----AADAIRLLRANRP-DFLIAAGTVLT--AEQVVLAKSSGADFVVTP--G 97 (224)
T ss_dssp HHHHHHHHTTCCEEEEETTST-----T-----HHHHHHHHHHHCT-TCEEEEESCCS--HHHHHHHHHHTCSEEECS--S
T ss_pred HHHHHHHHcCCCEEEEeccCc-----h-----HHHHHHHHHHhCc-CcEEeeCcEee--HHHHHHHHHCCCCEEEEC--C
Confidence 455667889999999985321 1 2334444444444 34444443322 255777788899999754 2
Q ss_pred CChhhhHHhhhccCCCcccccc
Q 016581 270 SNENLLSVFREGVQYDAAIGPG 291 (387)
Q Consensus 270 ~~~e~L~~~~~~~~~~k~l~lG 291 (387)
.+.+.++..++ + +..+.+|
T Consensus 98 ~d~~v~~~ar~-~--g~~~i~G 116 (224)
T 1vhc_A 98 LNPKIVKLCQD-L--NFPITPG 116 (224)
T ss_dssp CCHHHHHHHHH-T--TCCEECE
T ss_pred CCHHHHHHHHH-h--CCCEEec
Confidence 34555555554 2 3445556
No 59
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=47.09 E-value=83 Score=29.91 Aligned_cols=90 Identities=7% Similarity=0.138 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecC-----------cccc--cC-CChHH---HHHHHHHHHHHHcCCCCCce
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDE-----------PLLV--MD-LDSHK---LQAFIHSFRITNCGIQDTTQ 238 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDE-----------P~l~--~~-l~~~~---~~~a~~~~~~~~~~~~~~~~ 238 (387)
+.+| ++.+.+.|.+..+...++|++.|+|.- |... .+ ..... .+.+.+.++.+.+.++++..
T Consensus 149 t~~e-I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~p 227 (363)
T 3l5l_A 149 TLDD-IARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLP 227 (363)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCce
Confidence 4444 467888888888888999999999995 2221 00 01111 23567777777777765555
Q ss_pred EEEEecCCC-----------chhHHHHHHcCCCCEEEEe
Q 016581 239 IHTHMCYSN-----------FNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 239 v~lH~C~gn-----------~~~i~~~l~~l~vD~i~lE 266 (387)
|.+=+...+ +..++..|.+.++|.|++-
T Consensus 228 V~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs 266 (363)
T 3l5l_A 228 LTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVS 266 (363)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 555443211 1246777888999999876
No 60
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=46.54 E-value=2.1e+02 Score=27.62 Aligned_cols=90 Identities=14% Similarity=0.144 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC--EEEe-cCcccccCCChHHHHHHHHHHHHH---HcCCCCCceEEEEecCCC--
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGAS--WIQF-DEPLLVMDLDSHKLQAFIHSFRIT---NCGIQDTTQIHTHMCYSN-- 247 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~--~IQi-DEP~l~~~l~~~~~~~a~~~~~~~---~~~~~~~~~v~lH~C~gn-- 247 (387)
+..++...+..--+..++.|.+.|+. +||+ .|+.....-...+. .....++.. ++.+.++..|.+|+|.|.
T Consensus 131 ~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~-~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~~ 209 (399)
T 1ur4_A 131 NFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWA-KMSQLFNAGSQAVRETDSNILVALHFTNPETS 209 (399)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHH-HHHHHHHHHHHHHHHHCTTSEEEEEECCTTST
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHH-HHHHHHHHHHHHHHHhCCCCeEEEEeCCCcch
Confidence 56778888887777888889888864 6765 47766431011121 122222222 222234567899999653
Q ss_pred --chhHHHHHHc--CCCCEEEEe
Q 016581 248 --FNDIIHSIID--MDADVITIE 266 (387)
Q Consensus 248 --~~~i~~~l~~--l~vD~i~lE 266 (387)
|...++.|.. .++|+|++-
T Consensus 210 ~~~~~~~d~l~~~g~d~DvIG~s 232 (399)
T 1ur4_A 210 GRYAWIAETLHRHHVDYDVFASS 232 (399)
T ss_dssp THHHHHHHHHHHTTCCCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCcCeEeEe
Confidence 2233465543 468888876
No 61
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=46.31 E-value=81 Score=30.25 Aligned_cols=123 Identities=11% Similarity=0.048 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe
Q 016581 187 IYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 187 ~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE 266 (387)
+..+.+++|.++||++|-+-=|. . .+.+++..+.+..+-.+..=+|+ |+...+ .-.+.++|.+.+.
T Consensus 47 atv~Qi~~l~~aG~diVRvavp~-------~---~~a~al~~I~~~~~vPlvaDiHf---~~~lal-~a~e~G~dklRIN 112 (366)
T 3noy_A 47 ATLNQIKRLYEAGCEIVRVAVPH-------K---EDVEALEEIVKKSPMPVIADIHF---APSYAF-LSMEKGVHGIRIN 112 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS-------H---HHHHHHHHHHHHCSSCEEEECCS---CHHHHH-HHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEeCCCC-------h---HHHHHHHHHHhcCCCCEEEeCCC---CHHHHH-HHHHhCCCeEEEC
Confidence 55567788999999999985442 1 22344444444443233333453 443333 3456789999987
Q ss_pred cC--CCC--h-hhhHHhhhccCCCcccccccccCCCC------C-CCCHHHHHHHHHHH---HhhcCCCcEEEcC
Q 016581 267 NS--RSN--E-NLLSVFREGVQYDAAIGPGVYDIHSP------R-IPSTEEIVDRIYEM---RTVLETNILWVNP 326 (387)
Q Consensus 267 ~~--r~~--~-e~L~~~~~~~~~~k~l~lGvvd~~s~------~-ve~~e~v~~ri~~a---~~~v~~~~l~isP 326 (387)
-. ..+ + +.++..++ .+..+-+||=...-+ + -+++|.+.+-..+- ++.++.+++.+|.
T Consensus 113 PGNig~~~~~~~vv~~ak~---~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~ 184 (366)
T 3noy_A 113 PGNIGKEEIVREIVEEAKR---RGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSI 184 (366)
T ss_dssp HHHHSCHHHHHHHHHHHHH---HTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CcccCchhHHHHHHHHHHH---cCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEee
Confidence 21 111 2 23444555 245566665333211 1 26777766554433 4445778888774
No 62
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=45.32 E-value=71 Score=28.13 Aligned_cols=67 Identities=13% Similarity=0.135 Sum_probs=41.1
Q ss_pred HHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe
Q 016581 193 SELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 193 ~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE 266 (387)
+.+.++|+++|++.++.... .... ...+.+..+.+.. ++++.+|-..-+. .-+..+.+.++|.+.+-
T Consensus 37 ~~~~~~Gad~i~v~d~~~~~--~~~~--~~~~~i~~i~~~~--~ipvi~~ggI~~~-~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 37 KFYSEIGIDELVFLDITASV--EKRK--TMLELVEKVAEQI--DIPFTVGGGIHDF-ETASELILRGADKVSIN 103 (253)
T ss_dssp HHHHHTTCCEEEEEESSCSS--SHHH--HHHHHHHHHHTTC--CSCEEEESSCCSH-HHHHHHHHTTCSEEEES
T ss_pred HHHHHcCCCEEEEECCchhh--cCCc--ccHHHHHHHHHhC--CCCEEEeCCCCCH-HHHHHHHHcCCCEEEEC
Confidence 55678899999999876432 1111 2344444555544 4566666443333 33666677899999886
No 63
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=44.44 E-value=1.2e+02 Score=28.57 Aligned_cols=89 Identities=18% Similarity=0.269 Sum_probs=56.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecC-----------ccccc--C-CChHH---HHHHHHHHHHHHcCCCCCce
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDE-----------PLLVM--D-LDSHK---LQAFIHSFRITNCGIQDTTQ 238 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDE-----------P~l~~--~-l~~~~---~~~a~~~~~~~~~~~~~~~~ 238 (387)
+.+| ++++.+.|.+..+...++|++.|+|.- |.... + ..+.. .+.+.+.++.+.+.++++..
T Consensus 134 t~~e-I~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~p 212 (343)
T 3kru_A 134 SVEE-IKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKP 212 (343)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSC
T ss_pred CHHH-HHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCC
Confidence 4444 567888888888888899999999993 33211 1 01111 13566777777777765555
Q ss_pred EEEEecCCCc----------hhHHHHHHcCCCCEEEEe
Q 016581 239 IHTHMCYSNF----------NDIIHSIIDMDADVITIE 266 (387)
Q Consensus 239 v~lH~C~gn~----------~~i~~~l~~l~vD~i~lE 266 (387)
|.+=+...++ ..+...|.+. +|.+.+-
T Consensus 213 v~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 213 IFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp EEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEE
T ss_pred eEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEecc
Confidence 6555543222 2466777788 9999874
No 64
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=43.02 E-value=1.2e+02 Score=27.37 Aligned_cols=24 Identities=4% Similarity=0.018 Sum_probs=21.0
Q ss_pred HHHHHHHhhcCCCcEEEcCCCCCC
Q 016581 308 DRIYEMRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 308 ~ri~~a~~~v~~~~l~isPdCGl~ 331 (387)
++++++++.+|.+++.+-+||.+.
T Consensus 177 ~~~~~~v~~ip~drlLlETD~P~~ 200 (254)
T 3gg7_A 177 QKGAALIRSMPRDRVLTETDGPFL 200 (254)
T ss_dssp HHHHHHHHHSCGGGEEECCCTTTS
T ss_pred HHHHHHHHHcCCCeEEEeCCCCcc
Confidence 456888999999999999999875
No 65
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=42.17 E-value=66 Score=30.28 Aligned_cols=95 Identities=11% Similarity=0.071 Sum_probs=56.5
Q ss_pred HHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCC--EEEEecCCCChhhhHHhhhccCCCcccccccccCCCC
Q 016581 221 AFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDAD--VITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSP 298 (387)
Q Consensus 221 ~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD--~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~ 298 (387)
....-+..+.+.. +..|.+|.- ....++++.|.+.+.+ ...+-.-..+.+.++.+-+ + +-.+++|-+..+
T Consensus 155 ~F~~ql~lA~e~~--~lPviiH~r-~A~~d~l~iL~~~~~~~~~gViH~FsGs~e~a~~~l~-l--G~yis~~G~~~k-- 226 (325)
T 3ipw_A 155 GYRTLSILHQKYP--YLPFFFHCR-KSWSDLCQLNKELGYNGCKGVVHCFDGTEEEMNQILN-E--GWDIGVTGNSLQ-- 226 (325)
T ss_dssp HHHHTHHHHHHCT--TCCEEEEEE-SCHHHHHHHHHHTTCTTSCEEECSCCCCHHHHHHHHH-T--TCEEEECSGGGS--
T ss_pred HHHHHHHHHHHhh--CCeEEEEeC-chHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHh-c--CcEEeeCccccC--
Confidence 3444444444413 557889965 4567888888765432 2223321224666666555 2 456666654222
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCC
Q 016581 299 RIPSTEEIVDRIYEMRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 299 ~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~ 331 (387)
+.+ . .++++.+|.+++.+-+||.+-
T Consensus 227 ---~~~----~-~~~v~~iPldrlLlETDaP~l 251 (325)
T 3ipw_A 227 ---SIE----L-LNVMKQIPIERLHIETDCPYC 251 (325)
T ss_dssp ---SHH----H-HHHHTTSCGGGEEECCCTTSC
T ss_pred ---cHH----H-HHHHHhCCcccEEEeCCCccc
Confidence 222 2 268899999999999999874
No 66
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=42.07 E-value=74 Score=29.72 Aligned_cols=60 Identities=17% Similarity=0.146 Sum_probs=36.7
Q ss_pred HHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCch-hHHHHHHcCCCCEEEEe
Q 016581 191 VVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIE 266 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~-~i~~~l~~l~vD~i~lE 266 (387)
++++..++|+++|++|.+. ++..+.++..++ + . +.+= +.|+.+ +-+..+.+++||.||+=
T Consensus 219 e~~eAl~aGaDiImLDn~s------~~~l~~av~~~~----~---~--v~le-aSGGIt~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 219 QVEESLSNNVDMILLDNMS------ISEIKKAVDIVN----G---K--SVLE-VSGCVNIRNVRNIALTGVDYISIG 279 (300)
T ss_dssp HHHHHHHTTCSEEEEESCC------HHHHHHHHHHHT----T---S--SEEE-EESSCCTTTHHHHHTTTCSEEECG
T ss_pred HHHHHHHcCCCEEEECCCC------HHHHHHHHHhhc----C---c--eEEE-EECCCCHHHHHHHHHcCCCEEEeC
Confidence 4455567899999999643 333233444332 1 2 2233 336554 45678889999999865
No 67
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=41.33 E-value=88 Score=29.86 Aligned_cols=103 Identities=8% Similarity=0.123 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCcc-------ccc--CC-----ChHH---HHHHHHHHHHHHcCCCCCce
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDEPL-------LVM--DL-----DSHK---LQAFIHSFRITNCGIQDTTQ 238 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP~-------l~~--~l-----~~~~---~~~a~~~~~~~~~~~~~~~~ 238 (387)
+.+| ++++.+.|.+..+...++|.+.|+|.--. |+. +. .+.. .+.+.+.++.+.+.++++ .
T Consensus 152 t~~e-I~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~-~ 229 (361)
T 3gka_A 152 ELDE-IPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAA-R 229 (361)
T ss_dssp CGGG-HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGG-G
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCC-e
Confidence 3344 46777888888888899999999998532 111 00 1111 123444444444434333 4
Q ss_pred EEEEecCCC-------------chhHHHHHHcCCCCEEEEecCCCChhhhHHhhh
Q 016581 239 IHTHMCYSN-------------FNDIIHSIIDMDADVITIENSRSNENLLSVFRE 280 (387)
Q Consensus 239 v~lH~C~gn-------------~~~i~~~l~~l~vD~i~lE~~r~~~e~L~~~~~ 280 (387)
|.+-+...+ +..++..|.+.++|.|++-....+.+.++.+++
T Consensus 230 v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~ 284 (361)
T 3gka_A 230 VGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGDAIGQQLKA 284 (361)
T ss_dssp EEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHH
T ss_pred EEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHH
Confidence 444444211 124667778889999987632222233444544
No 68
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=41.30 E-value=1.2e+02 Score=28.60 Aligned_cols=88 Identities=10% Similarity=0.165 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecC-----------cccc--cC-CChHH---HHHHHHHHHHHHcCCCCCce
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDE-----------PLLV--MD-LDSHK---LQAFIHSFRITNCGIQDTTQ 238 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDE-----------P~l~--~~-l~~~~---~~~a~~~~~~~~~~~~~~~~ 238 (387)
+.+| ++++.+.|.+..+...++|++.|+|.- |... .+ ..... .+.+.+.++.+.+.+ +..
T Consensus 135 t~~e-I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v--~~p 211 (340)
T 3gr7_A 135 TKAD-IEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW--DGP 211 (340)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc--CCc
Confidence 4444 567888888888888999999999984 2221 01 01111 123444444444444 223
Q ss_pred EEEEecCCC----------chhHHHHHHcCCCCEEEEe
Q 016581 239 IHTHMCYSN----------FNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 239 v~lH~C~gn----------~~~i~~~l~~l~vD~i~lE 266 (387)
|.+-+...+ +..++..|.+.++|.|++-
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 444444222 2257778888999999885
No 69
>1yyp_B DNA polymerase, POL; processivity fold (SAME fold AS HSV UL42, PCNA, and homotrim sliding clamps), replication-transferase complex; HET: DNA; 2.50A {Human herpesvirus 5}
Probab=40.70 E-value=6.9 Score=22.75 Aligned_cols=17 Identities=47% Similarity=0.712 Sum_probs=13.2
Q ss_pred Ccc--ccCCcchhhhHHHH
Q 016581 359 PRR--LEGSFLSHCASIFE 375 (387)
Q Consensus 359 ~~~--~~~~~~~~~~~~~~ 375 (387)
++| |+..|++||+..-|
T Consensus 2 P~RiYl~~~Fl~~c~~~~e 20 (26)
T 1yyp_B 2 PRRLHLEPAFLPYSVKAHE 20 (26)
T ss_pred CceEecCHHHHHHhhhHHH
Confidence 566 99999999985443
No 70
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=40.66 E-value=3e+02 Score=27.80 Aligned_cols=143 Identities=8% Similarity=0.100 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcC--CCCEE
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDM--DADVI 263 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l--~vD~i 263 (387)
+...+..+++.+.|+++|=|- |.....-..+..+.+++.+... . ++.+.+-.+ +. .+++.-.+. +++.|
T Consensus 340 ~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~~---~--~vpisIDT~--~~-~v~eaal~~~~G~~iI 410 (566)
T 1q7z_A 340 EIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPYV---S--NVPLSLDIQ--NV-DLTERALRAYPGRSLF 410 (566)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHHH---T--CSCEEEECC--CH-HHHHHHHHHCSSCCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHhh---C--CceEEEeCC--CH-HHHHHHHHhcCCCCEE
Confidence 344455677889999999998 5433211222333455555332 2 445666544 33 455554444 77776
Q ss_pred E-EecCCCC--hhhhHHhhhccCCCcccccccccCCCCCCCCHH----HHHHHHHHHHhhcCC-CcEEEcCCC---CCCC
Q 016581 264 T-IENSRSN--ENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTE----EIVDRIYEMRTVLET-NILWVNPDC---GLKT 332 (387)
Q Consensus 264 ~-lE~~r~~--~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e----~v~~ri~~a~~~v~~-~~l~isPdC---Gl~~ 332 (387)
. +-. ..+ .+.+..+++ + +..+++--.+... -.|.+ .+.++++.+. ..+. +++++.|.. ||+.
T Consensus 411 Ndis~-~~~~~~~~~~~~~~-~--g~~vV~m~~~~~~--p~t~~~~~~~l~~~~~~a~-~~Gi~~~IilDPg~~~igfgk 483 (566)
T 1q7z_A 411 NSAKV-DEEELEMKINLLKK-Y--GGTLIVLLMGKDV--PKSFEERKEYFEKALKILE-RHDFSDRVIFDPGVLPLGAEG 483 (566)
T ss_dssp EEEES-CHHHHHHHHHHHHH-H--CCEEEEESCSSSC--CCSHHHHHHHHHHHHHHHH-HTTCGGGEEEECCCCCTTTTC
T ss_pred EECCc-chhhHHHHHHHHHH-h--CCeEEEEeCCCCC--cCCHHHHHHHHHHHHHHHH-HCCCCCcEEEeCCCCcccCcH
Confidence 3 111 112 234454555 2 3333332233211 12233 3344444444 4444 899999999 8887
Q ss_pred CChhhHHHHHHHHHHH
Q 016581 333 RKYTEVKPALSNMVAA 348 (387)
Q Consensus 333 ~~~~~a~~kL~~lv~~ 348 (387)
....-|+++.+.
T Consensus 484 ----~~~~~l~~~~~~ 495 (566)
T 1q7z_A 484 ----KPVEVLKTIEFI 495 (566)
T ss_dssp ----CHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHH
Confidence 345555555433
No 71
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=40.63 E-value=76 Score=27.59 Aligned_cols=104 Identities=10% Similarity=0.097 Sum_probs=58.4
Q ss_pred HHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecCC
Q 016581 190 EVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSR 269 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r 269 (387)
+.++++.+.|+++||+.+-. + ...+.++.+.+ + +..+...... + .+-++...+.++|.++.. .
T Consensus 29 ~~~~~l~~gGv~~iel~~k~------~----~~~~~i~~~~~--~-~~~~gag~vl-~-~d~~~~A~~~GAd~v~~~--~ 91 (207)
T 2yw3_A 29 GLARVLEEEGVGALEITLRT------E----KGLEALKALRK--S-GLLLGAGTVR-S-PKEAEAALEAGAAFLVSP--G 91 (207)
T ss_dssp HHHHHHHHTTCCEEEEECSS------T----HHHHHHHHHTT--S-SCEEEEESCC-S-HHHHHHHHHHTCSEEEES--S
T ss_pred HHHHHHHHcCCCEEEEeCCC------h----HHHHHHHHHhC--C-CCEEEeCeEe-e-HHHHHHHHHcCCCEEEcC--C
Confidence 34566778899999998532 1 12344444444 3 4445554432 2 255677778899999855 2
Q ss_pred CChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcC
Q 016581 270 SNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNP 326 (387)
Q Consensus 270 ~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isP 326 (387)
.+.+..+..++ + +..+.+| +.|++++.+-.+ .+++-+.+-|
T Consensus 92 ~d~~v~~~~~~-~--g~~~i~G--------~~t~~e~~~A~~-----~Gad~v~~fp 132 (207)
T 2yw3_A 92 LLEEVAALAQA-R--GVPYLPG--------VLTPTEVERALA-----LGLSALKFFP 132 (207)
T ss_dssp CCHHHHHHHHH-H--TCCEEEE--------ECSHHHHHHHHH-----TTCCEEEETT
T ss_pred CCHHHHHHHHH-h--CCCEEec--------CCCHHHHHHHHH-----CCCCEEEEec
Confidence 35555555544 2 3345556 335666544332 2556666654
No 72
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=40.53 E-value=1.3e+02 Score=28.18 Aligned_cols=88 Identities=14% Similarity=0.143 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecC-----------ccccc--C-CChHH---HHHHHHHHHHHHcCCCCCce
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDE-----------PLLVM--D-LDSHK---LQAFIHSFRITNCGIQDTTQ 238 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDE-----------P~l~~--~-l~~~~---~~~a~~~~~~~~~~~~~~~~ 238 (387)
+.+| ++++.+.|.+..+.+.++|++.|+|+- |.... + ..... .+.+.+.+..+.+.+ +..
T Consensus 135 t~~e-I~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v--~~p 211 (338)
T 1z41_A 135 SAEK-VKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW--DGP 211 (338)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc--CCc
Confidence 4444 466778888888888999999999985 32210 0 01111 123444444444444 334
Q ss_pred EEEEecCCC----------chhHHHHHHcCCCCEEEEe
Q 016581 239 IHTHMCYSN----------FNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 239 v~lH~C~gn----------~~~i~~~l~~l~vD~i~lE 266 (387)
|.+-+...+ ...+...|.+.++|.|++-
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~ 249 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCS 249 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 555554321 1246677788999999875
No 73
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=40.20 E-value=65 Score=28.06 Aligned_cols=70 Identities=14% Similarity=0.182 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe
Q 016581 190 EVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE 266 (387)
+.++.+.++|++.|++.++.... .... ...+.+..+.+.. ++.+..|....+... +..+.+.++|.+.+-
T Consensus 37 ~~a~~~~~~G~d~i~v~~~~~~~-~~~~---~~~~~i~~i~~~~--~ipvi~~g~i~~~~~-~~~~~~~Gad~V~i~ 106 (253)
T 1h5y_A 37 EMAVRYEEEGADEIAILDITAAP-EGRA---TFIDSVKRVAEAV--SIPVLVGGGVRSLED-ATTLFRAGADKVSVN 106 (253)
T ss_dssp HHHHHHHHTTCSCEEEEECCCCT-TTHH---HHHHHHHHHHHHC--SSCEEEESSCCSHHH-HHHHHHHTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEEeCCccc-cCCc---ccHHHHHHHHHhc--CCCEEEECCCCCHHH-HHHHHHcCCCEEEEC
Confidence 34566778899999999865432 1111 1233333333333 345555543333333 466667899999976
No 74
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=40.17 E-value=70 Score=28.32 Aligned_cols=84 Identities=10% Similarity=0.131 Sum_probs=47.6
Q ss_pred HHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecCC
Q 016581 190 EVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSR 269 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r 269 (387)
+.++++.+.|+++||+.+-. + .+.+.++.+.+..+ ++.++.....- .+-++...+.++|.++.. .
T Consensus 42 ~~~~al~~gGv~~iel~~k~------~----~~~~~i~~l~~~~~-~~~igagtvl~--~d~~~~A~~aGAd~v~~p--~ 106 (225)
T 1mxs_A 42 PLADALAAGGIRTLEVTLRS------Q----HGLKAIQVLREQRP-ELCVGAGTVLD--RSMFAAVEAAGAQFVVTP--G 106 (225)
T ss_dssp HHHHHHHHTTCCEEEEESSS------T----HHHHHHHHHHHHCT-TSEEEEECCCS--HHHHHHHHHHTCSSEECS--S
T ss_pred HHHHHHHHCCCCEEEEecCC------c----cHHHHHHHHHHhCc-ccEEeeCeEee--HHHHHHHHHCCCCEEEeC--C
Confidence 35566788999999998532 1 12334444444444 34454444322 245667778899999854 2
Q ss_pred CChhhhHHhhhccCCCcccccc
Q 016581 270 SNENLLSVFREGVQYDAAIGPG 291 (387)
Q Consensus 270 ~~~e~L~~~~~~~~~~k~l~lG 291 (387)
.+.+..+.-++ + +..+.+|
T Consensus 107 ~d~~v~~~~~~-~--g~~~i~G 125 (225)
T 1mxs_A 107 ITEDILEAGVD-S--EIPLLPG 125 (225)
T ss_dssp CCHHHHHHHHH-C--SSCEECE
T ss_pred CCHHHHHHHHH-h--CCCEEEe
Confidence 24555555444 2 3344556
No 75
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=39.89 E-value=2.2e+02 Score=25.88 Aligned_cols=145 Identities=10% Similarity=0.007 Sum_probs=77.1
Q ss_pred HHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecC
Q 016581 189 KEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENS 268 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~ 268 (387)
.+.++.|.++|+++|.+==|.-.. ..+.+. ...+.++.+.+ . .++.+..|++ |. .-++...+.+++.+.+..+
T Consensus 29 ~~i~~~L~~~Gv~~IE~g~~~~~~-~~p~~~-~~~e~~~~i~~-~-~~~~v~~l~~--n~-~~i~~a~~~G~~~V~i~~~ 101 (295)
T 1ydn_A 29 IALINRLSDCGYARIEATSFVSPK-WVPQLA-DSREVMAGIRR-A-DGVRYSVLVP--NM-KGYEAAAAAHADEIAVFIS 101 (295)
T ss_dssp HHHHHHHTTTTCSEEEEEECSCTT-TCGGGT-THHHHHHHSCC-C-SSSEEEEECS--SH-HHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHcCcCEEEEccCcCcc-cccccc-CHHHHHHHHHh-C-CCCEEEEEeC--CH-HHHHHHHHCCCCEEEEEEe
Confidence 345566778999988875433211 111110 12233333322 2 3567878863 64 3466677889999998832
Q ss_pred CC----------C-hhhhHH-------hhhccCCCcccc--cccc-cCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCC
Q 016581 269 RS----------N-ENLLSV-------FREGVQYDAAIG--PGVY-DIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPD 327 (387)
Q Consensus 269 r~----------~-~e~L~~-------~~~~~~~~k~l~--lGvv-d~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPd 327 (387)
.+ . .+.++. .++ .+..+. ++.+ +.-....-+++.+.+.++.+.+. +++.+.+...
T Consensus 102 ~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~---~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~-G~d~i~l~Dt 177 (295)
T 1ydn_A 102 ASEGFSKANINCTIAESIERLSPVIGAAIN---DGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSL-GCHEVSLGDT 177 (295)
T ss_dssp SCHHHHHHHTSSCHHHHHHHHHHHHHHHHH---TTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHH-TCSEEEEEET
T ss_pred cCHHHHHHHcCCCHHHHHHHHHHHHHHHHH---cCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc-CCCEEEecCC
Confidence 22 1 122322 232 133333 2211 10011245788888888776554 8899999876
Q ss_pred CCCCCCChhhHHHHHHHHH
Q 016581 328 CGLKTRKYTEVKPALSNMV 346 (387)
Q Consensus 328 CGl~~~~~~~a~~kL~~lv 346 (387)
-|.. +|....+-++.+.
T Consensus 178 ~G~~--~P~~~~~lv~~l~ 194 (295)
T 1ydn_A 178 IGRG--TPDTVAAMLDAVL 194 (295)
T ss_dssp TSCC--CHHHHHHHHHHHH
T ss_pred CCCc--CHHHHHHHHHHHH
Confidence 6763 4555555554443
No 76
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=39.74 E-value=88 Score=28.29 Aligned_cols=159 Identities=19% Similarity=0.227 Sum_probs=80.1
Q ss_pred HHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecC-----CCch-------hHHHHHHcC
Q 016581 191 VVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCY-----SNFN-------DIIHSIIDM 258 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~-----gn~~-------~i~~~l~~l 258 (387)
+++.+.+.|+++|.+-==.|....+.+.....+..++..+..+| + +-.|+ |.+. .++..+...
T Consensus 37 ~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lP----i-I~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~ 111 (258)
T 4h3d_A 37 EAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIP----L-LFTFRSVVEGGEKLISRDYYTTLNKEISNT 111 (258)
T ss_dssp HHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSC----E-EEECCCGGGTCSCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCC----E-EEEEechhhCCCCCCCHHHHHHHHHHHHhc
Confidence 33445667999766542233221111222223344444444442 2 34454 3322 455556566
Q ss_pred C-CCEEEEecCCCChhhhHHh----hhccCCCcccccccccCCC-CCCCCHHHHHHHHHHHHhhc-CCCcEEEcCCCCCC
Q 016581 259 D-ADVITIENSRSNENLLSVF----REGVQYDAAIGPGVYDIHS-PRIPSTEEIVDRIYEMRTVL-ETNILWVNPDCGLK 331 (387)
Q Consensus 259 ~-vD~i~lE~~r~~~e~L~~~----~~~~~~~k~l~lGvvd~~s-~~ve~~e~v~~ri~~a~~~v-~~~~l~isPdCGl~ 331 (387)
+ +|.+.+|.... .+..+.+ ++ .+..+ +++.|+ ...++.+++.+++.++.+.= +.-++.+.|.+
T Consensus 112 ~~~d~iDvEl~~~-~~~~~~l~~~a~~---~~~ki---I~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~~~~--- 181 (258)
T 4h3d_A 112 GLVDLIDVELFMG-DEVIDEVVNFAHK---KEVKV---IISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQN--- 181 (258)
T ss_dssp TCCSEEEEEGGGC-HHHHHHHHHHHHH---TTCEE---EEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSS---
T ss_pred CCchhhHHhhhcc-HHHHHHHHHHHHh---CCCEE---EEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEccCC---
Confidence 5 99999995442 2222222 22 12222 334454 34678899999999987652 23355566653
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHh-------------CC-Ccccc---CCcchhhh
Q 016581 332 TRKYTEVKPALSNMVAATKLLRTQL-------------TV-PRRLE---GSFLSHCA 371 (387)
Q Consensus 332 ~~~~~~a~~kL~~lv~~a~~~r~~l-------------~~-~~~~~---~~~~~~~~ 371 (387)
....|+ |.+++..+++.+ +. +|=|+ ||.+.||+
T Consensus 182 ------~~D~l~-Ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~fGS~lTf~~ 231 (258)
T 4h3d_A 182 ------EKDVLV-LLEATNEMFKIYADRPIITMSMSGMGVISRLCGEIFGSALTFGA 231 (258)
T ss_dssp ------HHHHHH-HHHHHHHHHHHTCSSCBEEEECTGGGGGGGTCHHHHCBCEEECB
T ss_pred ------HHHHHH-HHHHHHHHHHhcCCCCEEEEeCCCCChHHHHHHHHhCCceEecc
Confidence 233333 334555555543 22 44444 57788875
No 77
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=39.28 E-value=99 Score=29.51 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCc
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDEP 208 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP 208 (387)
+.+| ++++.+.|.+..+...++|.+.|+|.--
T Consensus 144 t~~e-I~~ii~~f~~AA~~a~~aGfDgVEih~a 175 (362)
T 4ab4_A 144 ETEE-INDIVEAYRSGAENAKAAGFDGVEIHGA 175 (362)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 4444 5678888888888889999999999853
No 78
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=39.09 E-value=2.1e+02 Score=25.41 Aligned_cols=24 Identities=25% Similarity=0.306 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHcCCCEEEecCccc
Q 016581 187 IYKEVVSELKAAGASWIQFDEPLL 210 (387)
Q Consensus 187 ~~~~~i~~L~~aG~~~IQiDEP~l 210 (387)
...+.++.+.++|+++|+++-|.-
T Consensus 33 ~~~~~~~~l~~~Gad~ielg~p~~ 56 (262)
T 1rd5_A 33 TTAEALRLLDGCGADVIELGVPCS 56 (262)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCS
T ss_pred HHHHHHHHHHHcCCCEEEECCCCC
Confidence 345567788899999999998874
No 79
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=38.97 E-value=2.3e+02 Score=25.91 Aligned_cols=130 Identities=15% Similarity=0.260 Sum_probs=72.3
Q ss_pred HHHHHHHcCCCEEEecC----cccccCCCh-HHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEE
Q 016581 191 VVSELKAAGASWIQFDE----PLLVMDLDS-HKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITI 265 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDE----P~l~~~l~~-~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~l 265 (387)
.++.+.+.|+++|=|=- |-... ++. +..+..++.+..+.+ .++.+.+-... ..+...-.+.++|.|.
T Consensus 35 ~a~~m~~~GAdiIDIGgeSTRPga~~-vs~eeE~~Rv~pvi~~l~~---~~v~iSIDT~~---~~Va~~al~aGa~iIN- 106 (270)
T 4hb7_A 35 RVKAMIDEGADIIDVGGVSTRPGHEM-VTLEEELNRVLPVVEAIVG---FDVKISVDTFR---SEVAEACLKLGVDMIN- 106 (270)
T ss_dssp HHHHHHHTTCSEEEEESCCCSTTCCC-CCHHHHHHHHHHHHHHHTT---SSSEEEEECSC---HHHHHHHHHHTCCEEE-
T ss_pred HHHHHHHCCCCEEEECCccCCCCCCC-CchHHHHHHHHHHHHHhhc---CCCeEEEECCC---HHHHHHHHHhccceec-
Confidence 44668889999988852 43322 222 233456666655532 25677776553 2567777788999886
Q ss_pred ecCC--CChhhhHHhhhccCCCcccccccccCCCCCCCC-HHHH----HHHHHHHHhh-cCCCcEEEcCCCCCCC
Q 016581 266 ENSR--SNENLLSVFREGVQYDAAIGPGVYDIHSPRIPS-TEEI----VDRIYEMRTV-LETNILWVNPDCGLKT 332 (387)
Q Consensus 266 E~~r--~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~-~e~v----~~ri~~a~~~-v~~~~l~isPdCGl~~ 332 (387)
|.+. .+.+.++.+.+ + +..+++=- ...++.-++ .++| .++++.+.+. ++.+++++-|.-||+-
T Consensus 107 DVs~g~~d~~m~~~va~-~--~~~~vlMH-~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFgK 177 (270)
T 4hb7_A 107 DQWAGLYDHRMFQIVAK-Y--DAEIILMH-NGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAK 177 (270)
T ss_dssp ETTTTSSCTHHHHHHHH-T--TCEEEEEC-CCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSC
T ss_pred cccccccchhHHHHHHH-c--CCCeEEec-cccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCccc
Confidence 2111 24556666666 2 22222210 111233222 3343 4455554443 3568999999999974
No 80
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=38.74 E-value=1.5e+02 Score=27.20 Aligned_cols=78 Identities=9% Similarity=-0.032 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+ +-.+.++.+++.+...+.|..+++.-+..+. .....++++|
T Consensus 24 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~---Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 24 DAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSR---ERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHH---HHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHH---HHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCC
Confidence 4677788888999999766642111 1112333 3355555556656556788888885455543 4445678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 101 avlv~ 105 (294)
T 3b4u_A 101 NILLA 105 (294)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99875
No 81
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=38.67 E-value=1e+02 Score=27.02 Aligned_cols=84 Identities=13% Similarity=0.139 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEecCC
Q 016581 190 EVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSR 269 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r 269 (387)
+.++++.+.|+++||+.+-.. . +.+.++.+.+..+ +..++-....- .+-++...+.++|.++.. .
T Consensus 32 ~~~~al~~gGv~~iel~~k~~-----~-----~~~~i~~l~~~~~-~~~vgagtvi~--~d~~~~A~~aGAd~v~~p--~ 96 (214)
T 1wbh_A 32 PMAKALVAGGVRVLNVTLRTE-----C-----AVDAIRAIAKEVP-EAIVGAGTVLN--PQQLAEVTEAGAQFAISP--G 96 (214)
T ss_dssp HHHHHHHHTTCCEEEEESCST-----T-----HHHHHHHHHHHCT-TSEEEEESCCS--HHHHHHHHHHTCSCEEES--S
T ss_pred HHHHHHHHcCCCEEEEeCCCh-----h-----HHHHHHHHHHHCc-CCEEeeCEEEE--HHHHHHHHHcCCCEEEcC--C
Confidence 355667889999999996321 1 2234443334444 23333322211 245667778899999865 2
Q ss_pred CChhhhHHhhhccCCCcccccc
Q 016581 270 SNENLLSVFREGVQYDAAIGPG 291 (387)
Q Consensus 270 ~~~e~L~~~~~~~~~~k~l~lG 291 (387)
.+.+..+..++ + +..+.+|
T Consensus 97 ~d~~v~~~~~~-~--g~~~i~G 115 (214)
T 1wbh_A 97 LTEPLLKAATE-G--TIPLIPG 115 (214)
T ss_dssp CCHHHHHHHHH-S--SSCEEEE
T ss_pred CCHHHHHHHHH-h--CCCEEEe
Confidence 35555555444 2 3334455
No 82
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=38.42 E-value=88 Score=27.44 Aligned_cols=95 Identities=11% Similarity=0.087 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCC--CCEEEEecCCCChhhhHHhhhccCCCcccccccccCCCC
Q 016581 221 AFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMD--ADVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSP 298 (387)
Q Consensus 221 ~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~--vD~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~ 298 (387)
.....++.+.+ . +..|.+|.- .....+++.+.+.+ .+++. -.-+.+.+.+..+.+ .+-.+.+|-.-+.
T Consensus 115 ~f~~~~~~a~~-~--~~Pv~iH~~-~a~~~~~~il~~~~~~~~~i~-H~~~g~~~~~~~~~~---~g~~i~~~g~~~~-- 184 (259)
T 1zzm_A 115 LLDEQLKLAKR-Y--DLPVILHSR-RTHDKLAMHLKRHDLPRTGVV-HGFSGSLQQAERFVQ---LGYKIGVGGTITY-- 184 (259)
T ss_dssp HHHHHHHHHHH-T--TCCEEEEEE-SCHHHHHHHHHHHCCTTCEEE-TTCCSCHHHHHHHHH---TTCEEEECGGGGC--
T ss_pred HHHHHHHHHHH-h--CCcEEEEec-ccHHHHHHHHHhcCCCCCEEE-EcCCCCHHHHHHHHH---CCCEEEECceeec--
Confidence 34444444443 2 456888864 34566777776654 34443 321224555555443 1333433311111
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCC
Q 016581 299 RIPSTEEIVDRIYEMRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 299 ~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~ 331 (387)
.. .+.++++++.+|.+++.+.+|+.+.
T Consensus 185 --~~----~~~~~~~~~~~~~dril~eTD~P~~ 211 (259)
T 1zzm_A 185 --PR----ASKTRDVIAKLPLASLLLETDAPDM 211 (259)
T ss_dssp --TT----TCSHHHHHHHSCGGGEEECCCBTSS
T ss_pred --cc----cHHHHHHHHhCCHHHEEEecCCCCc
Confidence 11 1235667778999999999999764
No 83
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=37.52 E-value=2e+02 Score=24.91 Aligned_cols=127 Identities=17% Similarity=0.198 Sum_probs=64.6
Q ss_pred HHHHHHHHHHcCCCEEEecCcc----------cccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCC-----chhHH
Q 016581 188 YKEVVSELKAAGASWIQFDEPL----------LVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSN-----FNDII 252 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDEP~----------l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn-----~~~i~ 252 (387)
+.+.++.+.++|.+.|++--.. +...+.++. .+.++..++.. ++.+..|.++.+ +...+
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~--gl~i~~~~~~~~~~~~~~~~~i 97 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQT----QKEIKELAASK--GIKIVGTGVYVAEKSSDWEKMF 97 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHH----HHHHHHHHHHT--TCEEEEEEEECCSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHH----HHHHHHHHHHc--CCeEEEEeccCCccHHHHHHHH
Confidence 4456666778899999996321 122223322 33334444433 445656655433 23456
Q ss_pred HHHHcCCCCEEEEecCCCChhhhHHhhhccCCCcccccccccCCC-CCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCC
Q 016581 253 HSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHS-PRIPSTEEIVDRIYEMRTVLETNILWVNPDCG 329 (387)
Q Consensus 253 ~~l~~l~vD~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s-~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCG 329 (387)
+....++++.+.+......++.+..+.+ ...+.+++=+... ....+++++.+.++. +..++.+.-|+|
T Consensus 98 ~~A~~lGa~~v~~~~~~~~~~~l~~~a~----~~gv~l~~En~~~~~~~~~~~~~~~ll~~-----~~~~~g~~~D~~ 166 (262)
T 3p6l_A 98 KFAKAMDLEFITCEPALSDWDLVEKLSK----QYNIKISVHNHPQPSDYWKPENLLKAISG-----RSQSLGSCSDVG 166 (262)
T ss_dssp HHHHHTTCSEEEECCCGGGHHHHHHHHH----HHTCEEEEECCSSSSSSSSHHHHHHHHTT-----SCTTEEEEEEHH
T ss_pred HHHHHcCCCEEEecCCHHHHHHHHHHHH----HhCCEEEEEeCCCccccCCHHHHHHHHHh-----CCCceEEEechH
Confidence 6667889999988632223443333322 1223333333322 223577776665541 235666665544
No 84
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=37.33 E-value=1.7e+02 Score=25.44 Aligned_cols=126 Identities=6% Similarity=-0.006 Sum_probs=57.4
Q ss_pred HHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCC--C---chhHHHHHHcCCCCE
Q 016581 188 YKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYS--N---FNDIIHSIIDMDADV 262 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~g--n---~~~i~~~l~~l~vD~ 262 (387)
+.+.++.+.++|.+.|++--..+..+..++. ++.++..++.. ++.+..+.++. . +...++....+++..
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~----~~~~~~~l~~~--gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~ 105 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQ----IRAFHDKCAAH--KVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKL 105 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHH----HHHHHHHHHHT--TCEEEEEEEEEECSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHH----HHHHHHHHHHc--CCeEEEEeccccCCHHHHHHHHHHHHHhCCCE
Confidence 3455566677888888887543322223322 23333333332 33443333321 1 223444555677887
Q ss_pred EEEecCCCChhhhHHhhhccCCCcccccccccC--CCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCC
Q 016581 263 ITIENSRSNENLLSVFREGVQYDAAIGPGVYDI--HSPRIPSTEEIVDRIYEMRTVLETNILWVNPDC 328 (387)
Q Consensus 263 i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~--~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdC 328 (387)
+.+......++.+....+ ...+.+++=+. ....+.+++++.+.++. .+ .++.+..|.
T Consensus 106 v~~~p~~~~l~~l~~~a~----~~gv~l~lEn~~~~~~~~~~~~~~~~ll~~----~~-p~vg~~~D~ 164 (257)
T 3lmz_A 106 IVGVPNYELLPYVDKKVK----EYDFHYAIHLHGPDIKTYPDATDVWVHTKD----LD-PRIGMCLDV 164 (257)
T ss_dssp EEEEECGGGHHHHHHHHH----HHTCEEEEECCCTTCSSSCSHHHHHHHHTT----SC-TTEEEEEEH
T ss_pred EEecCCHHHHHHHHHHHH----HcCCEEEEecCCCcccccCCHHHHHHHHHh----CC-CCccEEEch
Confidence 777532212333322222 11233333222 12346777776665542 22 255555553
No 85
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=36.56 E-value=1e+02 Score=28.55 Aligned_cols=60 Identities=17% Similarity=0.217 Sum_probs=36.0
Q ss_pred HHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCch-hHHHHHHcCCCCEEEEe
Q 016581 191 VVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIE 266 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~-~i~~~l~~l~vD~i~lE 266 (387)
++++..++|+++|++|.+. ++..+.++..++ ..+. +-. .|+.+ +-+..+.++++|+|++=
T Consensus 210 ea~eAl~aGaD~I~LDn~~------~~~l~~av~~~~-------~~v~--iea-SGGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNFS------GEDIDIAVSIAR-------GKVA--LEV-SGNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp HHHHHHHTTCSEEEEESCC------HHHHHHHHHHHT-------TTCE--EEE-ESSCCTTTHHHHHTTTCSEEECS
T ss_pred HHHHHHHcCCCEEEEcCCC------HHHHHHHHHhhc-------CCce--EEE-ECCCCHHHHHHHHHcCCCEEEEC
Confidence 5555667899999999743 233223444332 1222 222 35543 45778889999999863
No 86
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=36.42 E-value=94 Score=30.81 Aligned_cols=70 Identities=11% Similarity=0.212 Sum_probs=39.9
Q ss_pred HHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHH--HcCCCCEEE
Q 016581 188 YKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSI--IDMDADVIT 264 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l--~~l~vD~i~ 264 (387)
+.+.++++.++||+.|.|=|..=.. .+.+.. ..+.+++.. ++..+.+|.|--+|- .+...+ .+.++|.+.
T Consensus 160 ~~~~a~~l~~~Gad~I~l~DT~G~~-~P~~v~-~lv~~l~~~---~~~~i~~H~Hnd~Gl--AvAN~laAv~AGa~~VD 231 (464)
T 2nx9_A 160 WVDVAQQLAELGVDSIALKDMAGIL-TPYAAE-ELVSTLKKQ---VDVELHLHCHSTAGL--ADMTLLKAIEAGVDRVD 231 (464)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTSCC-CHHHHH-HHHHHHHHH---CCSCEEEEECCTTSC--HHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEcCCCCCc-CHHHHH-HHHHHHHHh---cCCeEEEEECCCCCh--HHHHHHHHHHhCCCEEE
Confidence 3444555678899999998866443 233222 334444433 333456666655554 445555 356888764
No 87
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=36.25 E-value=1.8e+02 Score=26.78 Aligned_cols=78 Identities=9% Similarity=-0.032 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchh---HHHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFND---IIHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~---i~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+ +-.+.++.+++.+...+.|..|++.-+..+ ......++++|
T Consensus 35 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~---Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 111 (307)
T 3s5o_A 35 GKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSS---ERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGAD 111 (307)
T ss_dssp HHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHH---HHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHH---HHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 3677888889999999776653211 1113333 335555556666666778888887444443 33455688999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 112 avlv~ 116 (307)
T 3s5o_A 112 AAMVV 116 (307)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99875
No 88
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=35.61 E-value=2e+02 Score=25.31 Aligned_cols=82 Identities=10% Similarity=-0.008 Sum_probs=43.4
Q ss_pred CceEEEEecCCCchhHHHHHHcCCCCEEEEecCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHh
Q 016581 236 TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRT 315 (387)
Q Consensus 236 ~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~ 315 (387)
+..|.+|.- .....+++.+.+.+...+.+-.-..+.+.+..+.+ .+-.+.+|-..+. + +.++++++
T Consensus 139 ~lPv~iH~~-~a~~~~~~il~~~~~~~~v~H~~~g~~~~~~~~~~---~g~~i~~~g~~~~-----~-----~~~~~~~~ 204 (272)
T 2y1h_A 139 NLPVNVHSR-SAGRPTINLLQEQGAEKVLLHAFDGRPSVAMEGVR---AGYFFSIPPSIIR-----S-----GQKQKLVK 204 (272)
T ss_dssp TCCEEEECT-TCHHHHHHHHHHTTCCSEEEETCCSCHHHHHHHHH---TTCEEEECGGGGT-----C-----HHHHHHHH
T ss_pred CCcEEEEeC-CcHHHHHHHHHhCCCCCEEEEccCCCHHHHHHHHH---CCCEEEECCcccC-----c-----HHHHHHHH
Confidence 345677743 33445566665554322223321223455544443 1333333321111 1 24777888
Q ss_pred hcCCCcEEEcCCCCCC
Q 016581 316 VLETNILWVNPDCGLK 331 (387)
Q Consensus 316 ~v~~~~l~isPdCGl~ 331 (387)
.+|.+++.+.+|+..-
T Consensus 205 ~~~~drll~eTD~P~~ 220 (272)
T 2y1h_A 205 QLPLTSICLETDSPAL 220 (272)
T ss_dssp HSCGGGEEECCCTTSS
T ss_pred hCCHHHEEEecCCCCC
Confidence 8999999999999753
No 89
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=35.11 E-value=2.6e+02 Score=25.53 Aligned_cols=78 Identities=10% Similarity=-0.013 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchh---HHHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFND---IIHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~---i~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+. ..+.|..|+..-+..+ ......++++|
T Consensus 28 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 28 EQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA---KRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 4677778888899999776643211 112333343334444333333 3567888877444443 34455688999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 105 avlv~ 109 (297)
T 3flu_A 105 YTLSV 109 (297)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98765
No 90
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=34.96 E-value=71 Score=24.08 Aligned_cols=26 Identities=12% Similarity=0.126 Sum_probs=21.9
Q ss_pred HHHHHHHHHhh--C---CCCCHHHHHHHHHH
Q 016581 15 RELKFALESFW--D---GKSSAEDLQKVSAD 40 (387)
Q Consensus 15 ~eL~~a~e~~~--~---g~i~~~~l~~~~~~ 40 (387)
.+|++|...|. . |.||.+||++++..
T Consensus 11 ~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~ 41 (98)
T 3n22_A 11 AVLVTTFHKYSSQEGDKFKLSKGEMKELLHK 41 (98)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHH
Confidence 67999999996 2 48999999999875
No 91
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=34.87 E-value=3.2e+02 Score=26.40 Aligned_cols=76 Identities=5% Similarity=0.127 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecC-------C-CchhHH
Q 016581 181 LPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCY-------S-NFNDII 252 (387)
Q Consensus 181 ~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~-------g-n~~~i~ 252 (387)
.+++.+.|++.++.|.++|||+|-+.= . ..-...+.++++++. .+ +.+.+.++. | +....+
T Consensus 134 ~eel~~~~~eqi~~L~~~GvDlll~ET----i-~~~~Eakaa~~a~~~--~~----lPv~iS~T~~~~G~l~G~~~~~~~ 202 (406)
T 1lt8_A 134 ETEVKKVFLQQLEVFMKKNVDFLIAEY----F-EHVEEAVWAVETLIA--SG----KPVAATMAIGPEGDLHGVPPGEAA 202 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECC----C-SCHHHHHHHHHHHGG--GT----SCEEEEECCBTTBCTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEcc----c-CCHHHHHHHHHHHHH--hC----CcEEEEEEECCCCCcCCCcHHHHH
Confidence 367888999999999999999987761 1 011112233433322 13 345555543 1 234677
Q ss_pred HHHHcCCCCEEEEec
Q 016581 253 HSIIDMDADVITIEN 267 (387)
Q Consensus 253 ~~l~~l~vD~i~lE~ 267 (387)
..+.++++++|.+--
T Consensus 203 ~~l~~~~~~avGvNC 217 (406)
T 1lt8_A 203 VRLVKAGASIIGVNC 217 (406)
T ss_dssp HHHHTTTCSEEEEES
T ss_pred HHhhcCCCCEEEecC
Confidence 777888999999984
No 92
>2ekm_A Hypothetical protein ST1511; NPPSFA, national project on protein ST and functional analyses, riken structural genomics/proteomi initiative; 2.06A {Sulfolobus tokodaii}
Probab=34.81 E-value=81 Score=26.39 Aligned_cols=63 Identities=17% Similarity=0.189 Sum_probs=36.1
Q ss_pred hHHHHHHcCC-CCEEEEecCCCChhhhHHhhhccCCCcccccccccCCCCC-CCCHHHHHHHHHHHHhhcC
Q 016581 250 DIIHSIIDMD-ADVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPR-IPSTEEIVDRIYEMRTVLE 318 (387)
Q Consensus 250 ~i~~~l~~l~-vD~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~-ve~~e~v~~ri~~a~~~v~ 318 (387)
.+++.+...+ |=.|+.-+++ ..+.+ +.+ .....=++||||..+|. +|+.+++.+|=+ .++.++
T Consensus 95 NVLn~iK~vpEVc~I~~ATAN-Pl~VI--vae--t~~GrgvlGVvDG~~p~GVE~e~d~~~Rk~-lLr~iG 159 (162)
T 2ekm_A 95 NVLNRIKNVEEVVRIFAATAN-PLQVL--VAE--TDQGRGVIGVVDGYTPLGIETEADIKERKE-LLRKFG 159 (162)
T ss_dssp HHHHHHHTSTTCCEEEEEESS-CEEEE--EEE--CSSCEEEEEEEESCCCCEECCHHHHHHHHH-HHHHTT
T ss_pred HHHHHhhcCcceeEEEEecCC-CEEEE--EEE--cCCCcEEEEEecCCCCCCccCHHHHHHHHH-HHHHhC
Confidence 3555565554 4445544433 23322 111 01246689999999885 999999888743 344433
No 93
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=33.91 E-value=2.8e+02 Score=26.85 Aligned_cols=83 Identities=12% Similarity=0.157 Sum_probs=48.3
Q ss_pred CceEEEEecCCCchhHHHHHHcCCC----------------------------CEEEEecCCCChhhhHHhhhccCCCcc
Q 016581 236 TTQIHTHMCYSNFNDIIHSIIDMDA----------------------------DVITIENSRSNENLLSVFREGVQYDAA 287 (387)
Q Consensus 236 ~~~v~lH~C~gn~~~i~~~l~~l~v----------------------------D~i~lE~~r~~~e~L~~~~~~~~~~k~ 287 (387)
+..|.+|.- .-..++++.|.+... -...+-.-..+.+.++.+-+ ++.+-.
T Consensus 196 ~lPv~IH~R-~A~~d~l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~H~FsGs~e~a~~~l~-lG~~~y 273 (401)
T 3e2v_A 196 SYPLFLHMR-SACDDFVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRKLVVHSFTGSAIDLQKLLN-LSPNIF 273 (401)
T ss_dssp TSCEEEEEE-SCHHHHHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCTTCCEEECSCCCCHHHHHHHHH-HCTTEE
T ss_pred CCeEEEEec-chHHHHHHHHHHhhccccccccccccccccccccccccccCCCCcEEEEcCCCCHHHHHHHHh-CCCCEE
Confidence 467889965 456667776654211 12223321224666666554 322256
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCC
Q 016581 288 IGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGL 330 (387)
Q Consensus 288 l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl 330 (387)
+++|-+..++ ++..++++.+|.++|.|-+||.+
T Consensus 274 is~~g~~~k~----------~~~~e~v~~iPldrLLlETDaP~ 306 (401)
T 3e2v_A 274 IGVNGCSLRT----------EENLAVVKQIPTERLLLETDAPW 306 (401)
T ss_dssp EEECGGGGSS----------HHHHHHHHTSCGGGEEECCCTTS
T ss_pred EEeCCEecCC----------HHHHHHHHhCCchhEEEecCCCC
Confidence 7775543222 12237888999999999999885
No 94
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=33.46 E-value=2.8e+02 Score=25.22 Aligned_cols=78 Identities=6% Similarity=-0.118 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+--..- ...|..+.+...++.....+.+ .+.|..+++.-+..+. .....++++|
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---r~pvi~Gvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3a5f_A 22 DKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK---RIPVIAGTGSNNTAASIAMSKWAESIGVD 98 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCcccHHHHHHHHHHHHhcCCC
Confidence 4677888889999999776653211 1123344433344444333333 4678888874444443 4445678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 99 avlv~ 103 (291)
T 3a5f_A 99 GLLVI 103 (291)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98775
No 95
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=33.35 E-value=2.5e+02 Score=25.77 Aligned_cols=78 Identities=5% Similarity=-0.024 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++. +++.+..++.|..|+...+..+. .....++++|
T Consensus 36 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~---~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 36 ATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRA---VLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHH---HHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHH---HHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 4677788888899999776653211 111333333333333 33333345788888764455443 3445678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 113 avlv~ 117 (304)
T 3l21_A 113 GLLVV 117 (304)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98875
No 96
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=32.87 E-value=81 Score=23.81 Aligned_cols=26 Identities=12% Similarity=0.066 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhC------CCCCHHHHHHHHHH
Q 016581 15 RELKFALESFWD------GKSSAEDLQKVSAD 40 (387)
Q Consensus 15 ~eL~~a~e~~~~------g~i~~~~l~~~~~~ 40 (387)
.+|+++...|.+ |.|+.+||+.++..
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~ 42 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQK 42 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHH
Confidence 678999999954 78999999998865
No 97
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=32.81 E-value=2.4e+02 Score=26.97 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=40.6
Q ss_pred hhhhHHhhhccCCCcccccccccCC------CCCCCCHHHHHHHHHHHHhhcCCCcEEEcCC-CCC
Q 016581 272 ENLLSVFREGVQYDAAIGPGVYDIH------SPRIPSTEEIVDRIYEMRTVLETNILWVNPD-CGL 330 (387)
Q Consensus 272 ~e~L~~~~~~~~~~k~l~lGvvd~~------s~~ve~~e~v~~ri~~a~~~v~~~~l~isPd-CGl 330 (387)
-+.|+.+.+ .+..|++-.++.. .....+++.+++-|+-+.+.++.+.+.|..| +|.
T Consensus 248 De~l~ala~---~GGvigv~f~~~fl~~~~~~~~~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfdG~ 310 (364)
T 3ly0_A 248 DRQLAMIRE---SRGMVGLNFATSFLREDGRRSAEMGWEPVLRHLDHLIDRLGEDHVGMGSDFDGA 310 (364)
T ss_dssp HHHHHHHHH---TTCEEEECCCHHHHSTTCCCCSCCCSHHHHHHHHHHHHHHCTTSEEECCCBTTS
T ss_pred HHHHHHHHH---cCcEEEEeccHhhhcCCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCC
Confidence 357788877 2455555544321 1224689999999999999999999999999 554
No 98
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=32.50 E-value=2.7e+02 Score=24.89 Aligned_cols=134 Identities=13% Similarity=0.109 Sum_probs=68.9
Q ss_pred HHHHHHHHcCCCEEEecCcccc-cCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe-c
Q 016581 190 EVVSELKAAGASWIQFDEPLLV-MDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE-N 267 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~-~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE-~ 267 (387)
++++++.+.|+.-|-++--.-. .++.. +...+.+..+.+ . +..+.+|+-...+..+.+.+.+.++. +.++ .
T Consensus 109 ~eL~~l~~~gv~Gi~l~~~~~~~~~~~~---~~~~~~~~~a~~-~--glpv~iH~~~~~l~~~~~~l~~~p~~-~Vi~H~ 181 (294)
T 4i6k_A 109 NELVNLKAQGIVGVRLNLFGLNLPALNT---PDWQKFLRNVES-L--NWQVELHAPPKYLVQLLPQLNEYSFD-VVIDHF 181 (294)
T ss_dssp HHHHHHHTTTEEEEEEECTTSCCCCSSS---HHHHHHHHHHHH-T--TCEEEEECCHHHHHHHHHHHTTSSSC-EEESGG
T ss_pred HHHHHHHHCCCcEEEeccCCCCCCCccc---HHHHHHHHHHHH-c--CCEEEEeeCcchHHHHHHHHHHCCCC-EEEECC
Confidence 4566777778876776521100 01111 123444444433 2 56788886522234556666677754 4455 3
Q ss_pred CCCC---------hhhhHHhhhccCCCccccc-ccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCCC
Q 016581 268 SRSN---------ENLLSVFREGVQYDAAIGP-GVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTR 333 (387)
Q Consensus 268 ~r~~---------~e~L~~~~~~~~~~k~l~l-Gvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~~ 333 (387)
.... ++.+..+.+ .+ +-.+.+ |++...+ .-.........++++++.+|++|++..+|+.+...
T Consensus 182 g~p~~~~g~~~~~~~~~~~l~~-~~-nv~~k~Sg~~~~~~-~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~ 254 (294)
T 4i6k_A 182 GRVDPVKGIEDPDYQKFLSLLN-VK-QHWIKVSGFYRLGA-TPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHTQH 254 (294)
T ss_dssp GCCCTTTCTTCHHHHHHHHHCC-TT-TEEEECCCGGGSSS-TTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHh-CC-CEEEEecccccccc-cCCCchhhHHHHHHHHHHhCcccEEEeCCCCCCCC
Confidence 2211 222222222 10 112222 2222111 11122355678899999999999999999988764
No 99
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=32.41 E-value=80 Score=28.98 Aligned_cols=25 Identities=8% Similarity=0.065 Sum_probs=20.6
Q ss_pred HHHHHHHhhcCCCcEEEcCCCCCCC
Q 016581 308 DRIYEMRTVLETNILWVNPDCGLKT 332 (387)
Q Consensus 308 ~ri~~a~~~v~~~~l~isPdCGl~~ 332 (387)
+.++++++.+|.+++.+.+||.+..
T Consensus 190 ~~l~~~v~~ip~drlLlETD~P~l~ 214 (287)
T 3rcm_A 190 THLHPLVGNIPEGRLMLESDAPYLL 214 (287)
T ss_dssp GGGHHHHTTSCTTSEEECCCTTSCC
T ss_pred HHHHHHHHhcCCccEEEeccCCccC
Confidence 3567788889999999999998753
No 100
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=32.33 E-value=71 Score=27.21 Aligned_cols=48 Identities=13% Similarity=0.076 Sum_probs=40.1
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCc
Q 016581 15 RELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTF 62 (387)
Q Consensus 15 ~eL~~a~e~~~~g~i~~~~l~~~~~~~~~~~v~~Q~~aGld~itdGef 62 (387)
.+|...|.+.-.|.++.+|+.++-+..+..+..-=+-.|+|+|.--+.
T Consensus 129 ~eL~~~R~qlls~~l~~dE~~~l~~~~~~~id~gn~~l~ldlvvR~~~ 176 (184)
T 3a98_A 129 YDLMEWRSQLLSGTLPKDELKELKQKVTSKIDYGNKILELDLIVRDED 176 (184)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC--
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhcCCceEEECCC
Confidence 377888888888999999999999999999988888999999865443
No 101
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=32.27 E-value=2.7e+02 Score=25.61 Aligned_cols=78 Identities=6% Similarity=-0.001 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.. ++.+...+.|..+++..+..+. .....++++|
T Consensus 29 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~---~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 105 (309)
T 3fkr_A 29 ASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTI---LEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAA 105 (309)
T ss_dssp HHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHH---HHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHH---HHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCC
Confidence 4677788888899999666642111 1113333333333333 3333335678888774445433 4445688999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 106 avlv~ 110 (309)
T 3fkr_A 106 MVMAM 110 (309)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99875
No 102
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=32.21 E-value=2.5e+02 Score=25.99 Aligned_cols=78 Identities=9% Similarity=-0.024 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+ ...+.|..++...+..+. .....++++|
T Consensus 45 ~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~---~grvpViaGvg~~~t~~ai~la~~A~~~Gad 121 (315)
T 3na8_A 45 PALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTV---AHRVPTIVSVSDLTTAKTVRRAQFAESLGAE 121 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHH---TTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh---CCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 4677788888899999776653211 11133333333344433333 334677788774455443 3445688999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 122 avlv~ 126 (315)
T 3na8_A 122 AVMVL 126 (315)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 98875
No 103
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=31.96 E-value=2.3e+02 Score=26.95 Aligned_cols=85 Identities=9% Similarity=0.082 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecC-----------ccccc--C-CChHH---HHHHHHHHHHHHcCCCCCceEEEEe
Q 016581 181 LPKILPIYKEVVSELKAAGASWIQFDE-----------PLLVM--D-LDSHK---LQAFIHSFRITNCGIQDTTQIHTHM 243 (387)
Q Consensus 181 ~~~la~~~~~~i~~L~~aG~~~IQiDE-----------P~l~~--~-l~~~~---~~~a~~~~~~~~~~~~~~~~v~lH~ 243 (387)
++++.+.+.+..+...++|++.|+|+- |.... + ..... .+.+.+.++.+.+.++++ .|.+-+
T Consensus 162 I~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrl 240 (376)
T 1icp_A 162 IPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRI 240 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEe
Confidence 356667777777888889999999985 32211 0 01111 123444444444444332 344433
Q ss_pred cCC--------C-----chhHHHHHHcCCCCEEEEe
Q 016581 244 CYS--------N-----FNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 244 C~g--------n-----~~~i~~~l~~l~vD~i~lE 266 (387)
... . +..+...|.+.++|.|.+-
T Consensus 241 s~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~ 276 (376)
T 1icp_A 241 SPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVV 276 (376)
T ss_dssp CTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEE
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 311 1 2256777788899999875
No 104
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=31.90 E-value=1.3e+02 Score=28.87 Aligned_cols=89 Identities=8% Similarity=0.012 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecC-----------ccccc--C-CChHH---HHHHHHHHHHHHcCCCCCce
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDE-----------PLLVM--D-LDSHK---LQAFIHSFRITNCGIQDTTQ 238 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDE-----------P~l~~--~-l~~~~---~~~a~~~~~~~~~~~~~~~~ 238 (387)
+.+| ++.+.+.+.+..+...++|++.|+|+- |.... + ..... .+.+.+.+..+.+.++.+ .
T Consensus 157 t~~e-I~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~ 234 (377)
T 2r14_A 157 ETDE-IPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-R 234 (377)
T ss_dssp CGGG-HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-G
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-c
Confidence 3344 356677777777788889999999974 32211 0 01111 123444444444444333 4
Q ss_pred EEEEecCCC-------------chhHHHHHHcCCCCEEEEe
Q 016581 239 IHTHMCYSN-------------FNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 239 v~lH~C~gn-------------~~~i~~~l~~l~vD~i~lE 266 (387)
|++-+...+ +..+...|.+.++|.|++-
T Consensus 235 v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~ 275 (377)
T 2r14_A 235 VGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFN 275 (377)
T ss_dssp EEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 555543211 1245677788999999875
No 105
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=31.79 E-value=2.4e+02 Score=26.69 Aligned_cols=89 Identities=10% Similarity=0.156 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecC-----------ccccc--C-CChHH---HHHHHHHHHHHHcCCCCCce
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDE-----------PLLVM--D-LDSHK---LQAFIHSFRITNCGIQDTTQ 238 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDE-----------P~l~~--~-l~~~~---~~~a~~~~~~~~~~~~~~~~ 238 (387)
+.+| +..+.+.+.+..+...++|++.|+|+- |.... + ..... .+.+.+.+..+.+.++++ .
T Consensus 152 t~~e-I~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-~ 229 (364)
T 1vyr_A 152 ELDE-IPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD-R 229 (364)
T ss_dssp CGGG-HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-G
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-c
Confidence 3344 355677777777888889999999974 32111 0 01111 124555555555555433 4
Q ss_pred EEEEecCCC--------------chhHHHHHHcCCCCEEEEe
Q 016581 239 IHTHMCYSN--------------FNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 239 v~lH~C~gn--------------~~~i~~~l~~l~vD~i~lE 266 (387)
|.+-+..++ +..+...|.+.++|.|.+-
T Consensus 230 v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~ 271 (364)
T 1vyr_A 230 IGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMS 271 (364)
T ss_dssp EEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 555443221 1135677788899999876
No 106
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=31.65 E-value=96 Score=27.07 Aligned_cols=68 Identities=9% Similarity=0.111 Sum_probs=38.1
Q ss_pred HHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEec
Q 016581 192 VSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIEN 267 (387)
Q Consensus 192 i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~ 267 (387)
++.+.++|+++|++++-.....-.... +.++.+.+.. ++++.+|----+.. -++.+.+.++|.+.+-.
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~~~~~~-----~~i~~i~~~~--~ipv~v~ggi~~~~-~~~~~l~~Gad~V~lg~ 104 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFGRGSNH-----ELLAEVVGKL--DVQVELSGGIRDDE-SLAAALATGCARVNVGT 104 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTTSCCCH-----HHHHHHHHHC--SSEEEEESSCCSHH-HHHHHHHTTCSEEEECH
T ss_pred HHHHHHcCCCEEEEEcCcccccCCChH-----HHHHHHHHhc--CCcEEEECCCCCHH-HHHHHHHcCCCEEEECc
Confidence 345678899999998632221101101 2233333333 34666664332333 36677788999999873
No 107
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=31.54 E-value=2.6e+02 Score=25.44 Aligned_cols=78 Identities=12% Similarity=0.022 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+ ...+.|..|+...+..+. .....++++|
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~---~grvpviaGvg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLV---DKRVPVIAGTGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHH---TTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHh---CCCCcEEEeCCcccHHHHHHHHHHHHHcCCC
Confidence 4677788888899999776653211 11133333333333333333 335678888764455543 3345578999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 100 avlv~ 104 (292)
T 3daq_A 100 AIMLI 104 (292)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98765
No 108
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=31.48 E-value=89 Score=23.16 Aligned_cols=26 Identities=8% Similarity=0.126 Sum_probs=21.8
Q ss_pred HHHHHHHHHhh--C---CCCCHHHHHHHHHH
Q 016581 15 RELKFALESFW--D---GKSSAEDLQKVSAD 40 (387)
Q Consensus 15 ~eL~~a~e~~~--~---g~i~~~~l~~~~~~ 40 (387)
.+|+++...|. . |.|+.+||+++...
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~ 40 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTR 40 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHH
Confidence 67899999996 2 47999999998875
No 109
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=31.42 E-value=2.5e+02 Score=25.98 Aligned_cols=77 Identities=17% Similarity=0.153 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHH---HHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDII---HSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~---~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++..... +...+.|..+++. +..+.+ ....++++|
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~---~~grvpViaGvg~-st~~ai~la~~A~~~Gad 108 (314)
T 3d0c_A 33 KGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTEL---VNGRATVVAGIGY-SVDTAIELGKSAIDSGAD 108 (314)
T ss_dssp HHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHH---HTTSSEEEEEECS-SHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHH---hCCCCeEEecCCc-CHHHHHHHHHHHHHcCCC
Confidence 4677788888899998766542111 1113333333333433333 3335788889886 766544 344678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 109 avlv~ 113 (314)
T 3d0c_A 109 CVMIH 113 (314)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99875
No 110
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=31.37 E-value=3.1e+02 Score=25.10 Aligned_cols=78 Identities=12% Similarity=0.031 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+.+ .+.|..+++.-+..+. .....++++|
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 33 AKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK---RVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 4677788888899999776653211 1113344433344444333333 5678788774444443 3445678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 110 avlv~ 114 (301)
T 1xky_A 110 AVMLV 114 (301)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98765
No 111
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=31.08 E-value=2.9e+02 Score=25.08 Aligned_cols=78 Identities=14% Similarity=-0.040 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+. ..+.|..+++.-+..+. .....++++|
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~~~Gad 97 (289)
T 2yxg_A 21 DGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN---GRVQVIAGAGSNCTEEAIELSVFAEDVGAD 97 (289)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 4677788888999999776653211 111334343334444333333 35678888874454443 3444578999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 98 avlv~ 102 (289)
T 2yxg_A 98 AVLSI 102 (289)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98765
No 112
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.67 E-value=3e+02 Score=25.36 Aligned_cols=78 Identities=10% Similarity=-0.058 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+. ..+.|..++..-+..+. .....++++|
T Consensus 44 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 44 DSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK---GRIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 4667777888889999776643211 112334343334443333333 34677788774445443 3445688999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 121 avlv~ 125 (314)
T 3qze_A 121 ACLLV 125 (314)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98775
No 113
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=30.48 E-value=3.2e+02 Score=25.02 Aligned_cols=78 Identities=12% Similarity=0.056 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+. ..+.|..+++.-+..+. .....++++|
T Consensus 37 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 37 AAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG---DRAKLIAGVGTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT---TTSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 4677788888899999776653211 112334443334444333333 35678888874454443 3445678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 114 avlv~ 118 (304)
T 3cpr_A 114 GLLVV 118 (304)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98765
No 114
>2d16_A Hypothetical protein PH1918; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.65A {Pyrococcus horikoshii}
Probab=30.34 E-value=24 Score=29.58 Aligned_cols=32 Identities=19% Similarity=0.177 Sum_probs=23.7
Q ss_pred cccccccccCCCC-CCCCHHHHHHHHHHHHhhcC
Q 016581 286 AAIGPGVYDIHSP-RIPSTEEIVDRIYEMRTVLE 318 (387)
Q Consensus 286 k~l~lGvvd~~s~-~ve~~e~v~~ri~~a~~~v~ 318 (387)
..=++||||..+| .+|+.+++.+|=+ .++.++
T Consensus 126 GrgvlGVvDG~~p~GVE~e~d~~~Rk~-lLr~iG 158 (162)
T 2d16_A 126 GRAVIGVVDGKAANKIETDEQKKERRE-LVEKIG 158 (162)
T ss_dssp CEEEEEEEESSCCCSCCCHHHHHHHHH-HHHHHT
T ss_pred CcEEEEEecCCCCCCccCHHHHHHHHH-HHHHhC
Confidence 3678999999887 5999999888733 344333
No 115
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, P protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=30.27 E-value=1e+02 Score=29.26 Aligned_cols=57 Identities=14% Similarity=0.225 Sum_probs=38.6
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCcEEEcCCCCCCCCChhhHHHHHHHHHH-HHHHHHHHh
Q 016581 298 PRIPSTEEIVDRIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMVA-ATKLLRTQL 356 (387)
Q Consensus 298 ~~ve~~e~v~~ri~~a~~~v~~~~l~isPdCGl~~~~~~~a~~kL~~lv~-~a~~~r~~l 356 (387)
..+.|+|+|+++|++..+..+.+.+++.+.++- .+.+...+.|+.+.+ ..=.+|+..
T Consensus 306 ~lvGtpe~va~~l~~~~~~~G~d~~~l~~~~~~--~~~~~~~~~l~~~a~~V~P~l~~~~ 363 (376)
T 2i7g_A 306 LFLGEPELVAEKIIKAHGVFKNDRFLLQMAIGL--MPHDQIMRGIELYGTKVAPLVRKEL 363 (376)
T ss_dssp CEEESHHHHHHHHHHHHHHHCCSEEEEECCCTT--CCHHHHHHHHHHHHHTHHHHHHHHT
T ss_pred eEEeCHHHHHHHHHHHHHhcCCCeEEEEeCCCC--CCHHHHHHHHHHHHHhhhhhhcccc
Confidence 357899999999999888889999999987642 233444555555544 333344433
No 116
>1nfp_A LUXF gene product; flavin mononucleotide, myristate, flavoprotein; HET: FMN MYR; 1.60A {Photobacterium leiognathi} SCOP: c.1.16.2
Probab=30.25 E-value=94 Score=26.90 Aligned_cols=29 Identities=0% Similarity=-0.182 Sum_probs=25.8
Q ss_pred CCCCHHHHHH-HHHHHHhhcCCCcEEEcCC
Q 016581 299 RIPSTEEIVD-RIYEMRTVLETNILWVNPD 327 (387)
Q Consensus 299 ~ve~~e~v~~-ri~~a~~~v~~~~l~isPd 327 (387)
.+.|||+|++ +|++..+..+.+.+++..+
T Consensus 170 ~vGtpe~v~~~~l~~~~~~~G~de~~~~~~ 199 (228)
T 1nfp_A 170 AAGNFDTCLHHVAEMAQGLNNKVDFLFCFE 199 (228)
T ss_dssp EEECHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 4789999999 9999999999999998754
No 117
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=30.21 E-value=2.5e+02 Score=25.51 Aligned_cols=78 Identities=12% Similarity=0.006 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.. ++.+...+.|..|++.-+..+. .....++++|
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~---~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 22 KSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEI---IRVANKRIPIIAGTGANSTREAIELTKAAKDLGAD 98 (291)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHH---HHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHH---HHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 4667777888899999766553211 1123333333333333 3333335678888774445433 3345678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 99 avlv~ 103 (291)
T 3tak_A 99 AALLV 103 (291)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98765
No 118
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=30.02 E-value=3e+02 Score=25.16 Aligned_cols=78 Identities=6% Similarity=-0.030 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHH---HHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDII---HSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~---~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+. ..+.|..+++.-+..+.+ ....++++|
T Consensus 32 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 32 ASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK---GKIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 4677788888899999776653211 111334343333443333333 356788888744554433 344578999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 109 avlv~ 113 (303)
T 2wkj_A 109 AVSAV 113 (303)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 98765
No 119
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=30.01 E-value=3.2e+02 Score=24.85 Aligned_cols=78 Identities=8% Similarity=-0.061 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+. ..+.|..+++.-+..+. .....++++|
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA---GRIKVIAGTGGNATHEAVHLTAHAKEVGAD 97 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 4677788889999999776643211 111333343334444333333 35678888874455443 3444678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 98 avlv~ 102 (294)
T 2ehh_A 98 GALVV 102 (294)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98765
No 120
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=29.99 E-value=3.3e+02 Score=25.07 Aligned_cols=143 Identities=8% Similarity=0.072 Sum_probs=70.8
Q ss_pred HHHHHHHcCCCEEEecC----cccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEe
Q 016581 191 VVSELKAAGASWIQFDE----PLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIE 266 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDE----P~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE 266 (387)
..+++.+.|+++|=|-- |.....-..+..+..++.++.+.+. ++.+.+-.. +. .++..-.+.+++.|. +
T Consensus 57 ~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~---~vpiSIDT~--~~-~Va~aAl~aGa~iIN-d 129 (294)
T 2dqw_A 57 RAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL---GVPVSVDTR--KP-EVAEEALKLGAHLLN-D 129 (294)
T ss_dssp HHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT---CSCEEEECS--CH-HHHHHHHHHTCSEEE-C
T ss_pred HHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC---CCeEEEECC--CH-HHHHHHHHhCCCEEE-E
Confidence 45677888999998874 3221111122334567777665543 445655433 32 455555566899774 2
Q ss_pred cCC-CChhhhHHhhhccCCCccccccccc---CCC----CCCCC-----HHHHHHHHHHHHhhcCCCcEEEcCCCCCCCC
Q 016581 267 NSR-SNENLLSVFREGVQYDAAIGPGVYD---IHS----PRIPS-----TEEIVDRIYEMRTVLETNILWVNPDCGLKTR 333 (387)
Q Consensus 267 ~~r-~~~e~L~~~~~~~~~~k~l~lGvvd---~~s----~~ve~-----~e~v~~ri~~a~~~v~~~~l~isPdCGl~~~ 333 (387)
.+. .+.+.+..+++ + +..+++--.+ .++ +.-++ .+.+.++++.+. ..+..++++-|.-||+-
T Consensus 130 Vsg~~d~~m~~v~a~-~--~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~-~~Gi~~IilDPG~Gf~k- 204 (294)
T 2dqw_A 130 VTGLRDERMVALAAR-H--GVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRAL-SAGVPQVVLDPGFGFGK- 204 (294)
T ss_dssp SSCSCCHHHHHHHHH-H--TCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHH-HTTCSCEEEECCTTSSC-
T ss_pred CCCCCChHHHHHHHH-h--CCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHH-HCCCCcEEEcCCCCccc-
Confidence 111 23445565665 2 2223322222 111 11122 234444555554 34656999999888864
Q ss_pred ChhhHHHHHHHH
Q 016581 334 KYTEVKPALSNM 345 (387)
Q Consensus 334 ~~~~a~~kL~~l 345 (387)
+.+.-+.-|+++
T Consensus 205 t~~~n~~ll~~l 216 (294)
T 2dqw_A 205 LLEHNLALLRRL 216 (294)
T ss_dssp CHHHHHHHHHTH
T ss_pred CHHHHHHHHHHH
Confidence 333333334333
No 121
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=29.97 E-value=1.1e+02 Score=29.66 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecC
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDE 207 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDE 207 (387)
+.+| ++.+.+.|.+..+...++|++.|+|.-
T Consensus 162 t~~e-I~~ii~~f~~AA~~a~~AGfDgVEIh~ 192 (402)
T 2hsa_B 162 GTYE-ISQVVEDYRRSALNAIEAGFDGIEIHG 192 (402)
T ss_dssp CGGG-HHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 3444 466777888888888899999999996
No 122
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=29.60 E-value=96 Score=23.69 Aligned_cols=26 Identities=8% Similarity=0.126 Sum_probs=21.8
Q ss_pred HHHHHHHHHhh--C---CCCCHHHHHHHHHH
Q 016581 15 RELKFALESFW--D---GKSSAEDLQKVSAD 40 (387)
Q Consensus 15 ~eL~~a~e~~~--~---g~i~~~~l~~~~~~ 40 (387)
.+|++|...|. . |.|+.+||++++..
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~ 43 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTR 43 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHH
Confidence 67899999995 2 47999999999875
No 123
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=29.25 E-value=1.2e+02 Score=26.09 Aligned_cols=69 Identities=19% Similarity=0.155 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHHHHHcCCCCEEEEec
Q 016581 189 KEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIEN 267 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~~l~~l~vD~i~lE~ 267 (387)
.+.++.+.++|+++||++++.....-.+... .....+....... ++.+.++ +-++...++++|++.+..
T Consensus 34 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~--~v~v~v~-------~~~~~a~~~gad~v~l~~ 102 (227)
T 2tps_A 34 VTVVQKALKGGATLYQFREKGGDALTGEARI-KFAEKAQAACREA--GVPFIVN-------DDVELALNLKADGIHIGQ 102 (227)
T ss_dssp HHHHHHHHHHTCSEEEECCCSTTCCCHHHHH-HHHHHHHHHHHHH--TCCEEEE-------SCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHhHHHHHH-HHHHHHHHHHHHc--CCeEEEc-------CHHHHHHHcCCCEEEECC
Confidence 3456667788999999998765421110002 1222333333322 2334443 225667788999999863
No 124
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=29.11 E-value=2.1e+02 Score=25.65 Aligned_cols=127 Identities=12% Similarity=0.093 Sum_probs=62.2
Q ss_pred HHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEec----CCCc-h-------hHHHHHHcCC
Q 016581 192 VSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMC----YSNF-N-------DIIHSIIDMD 259 (387)
Q Consensus 192 i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C----~gn~-~-------~i~~~l~~l~ 259 (387)
++.+.+.|++.|.+-==.|....+.+.....+..++..+.. .++.+++= .|.+ . .++....+++
T Consensus 38 ~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~----~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g 113 (257)
T 2yr1_A 38 AEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGE----IPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSG 113 (257)
T ss_dssp HHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSS----CCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHT
T ss_pred HHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccC----CCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcC
Confidence 44455679997655321232211111222334445444433 34444432 2444 2 4666667777
Q ss_pred -CCEEEEecCCCC-hh-hhHHhhhccCCCcccccccccCCC-CCCCCHHHHHHHHHHHHhhc-CCCcEEEcCCC
Q 016581 260 -ADVITIENSRSN-EN-LLSVFREGVQYDAAIGPGVYDIHS-PRIPSTEEIVDRIYEMRTVL-ETNILWVNPDC 328 (387)
Q Consensus 260 -vD~i~lE~~r~~-~e-~L~~~~~~~~~~k~l~lGvvd~~s-~~ve~~e~v~~ri~~a~~~v-~~~~l~isPdC 328 (387)
+|.+.+|....+ .. .++...+ .+.+++ ++.|+ ...++.+++.++++++.+.= +.-++.+.|.+
T Consensus 114 ~~d~iDvEl~~~~~~~~l~~~~~~---~~~kvI---~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~a~s 181 (257)
T 2yr1_A 114 AIDLVDYELAYGERIADVRRMTEE---CSVWLV---VSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKS 181 (257)
T ss_dssp CCSEEEEEGGGTTHHHHHHHHHHH---TTCEEE---EEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSS
T ss_pred CCCEEEEECCCChhHHHHHHHHHh---CCCEEE---EEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEeccCC
Confidence 999999964433 11 1221222 122222 13343 23456789999999976642 22355666643
No 125
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=29.08 E-value=1.8e+02 Score=25.77 Aligned_cols=83 Identities=11% Similarity=0.085 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCC-CCCceEEEEecCCCchhHHHHHHcCCCC
Q 016581 183 KILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGI-QDTTQIHTHMCYSNFNDIIHSIIDMDAD 261 (387)
Q Consensus 183 ~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~-~~~~~v~lH~C~gn~~~i~~~l~~l~vD 261 (387)
...+.+.+.++...+.|+++|.+--...... ..+..+.+++.++.+.+-. +.++.+.+|....+...+...+..++-+
T Consensus 99 ~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~-~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l~~~~~~~ 177 (290)
T 3tva_A 99 SRVAEMKEISDFASWVGCPAIGLHIGFVPES-SSPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEFIEDVNRP 177 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCCCCCT-TSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCCCCccc-chHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHhcCCC
Confidence 3445667777777788999988853322222 2233446777777766533 2367888887765555555666555433
Q ss_pred --EEEEe
Q 016581 262 --VITIE 266 (387)
Q Consensus 262 --~i~lE 266 (387)
++.+|
T Consensus 178 ~~g~~~D 184 (290)
T 3tva_A 178 NLGINFD 184 (290)
T ss_dssp TEEEEEC
T ss_pred CEEEEec
Confidence 34555
No 126
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=28.60 E-value=54 Score=30.37 Aligned_cols=63 Identities=13% Similarity=0.108 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCch-hHHHHHHcCCCCEEEEe
Q 016581 191 VVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIE 266 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~-~i~~~l~~l~vD~i~lE 266 (387)
++++..++|+++|++|.. .++..+.+++.++... + ...+ .+.|+.+ +-+..+.++++|+|++=
T Consensus 205 ea~eA~~aGaD~I~LDn~------~~e~l~~av~~l~~~~---~-~v~i---eASGGIt~eni~~~a~tGVD~IsvG 268 (285)
T 1o4u_A 205 DALRAVEAGADIVMLDNL------SPEEVKDISRRIKDIN---P-NVIV---EVSGGITEENVSLYDFETVDVISSS 268 (285)
T ss_dssp HHHHHHHTTCSEEEEESC------CHHHHHHHHHHHHHHC---T-TSEE---EEEECCCTTTGGGGCCTTCCEEEEG
T ss_pred HHHHHHHcCCCEEEECCC------CHHHHHHHHHHhhccC---C-CceE---EEECCCCHHHHHHHHHcCCCEEEEe
Confidence 444456689999999972 3333334555543221 1 1222 1224442 34556778899999864
No 127
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=28.46 E-value=3e+02 Score=24.97 Aligned_cols=78 Identities=12% Similarity=-0.053 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHHH---HHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDIIH---SIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~~---~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+.+ .+.|..+++.-+..+.++ ...++++|
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 22 ASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG---RIPVIAGTGANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHTTTSSCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHhcCCC
Confidence 4677778888889999776653211 1113343433344443333333 467888877445554443 34578999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 99 avlv~ 103 (292)
T 2ojp_A 99 GCLTV 103 (292)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98765
No 128
>1vgg_A Conserved hypothetical protein TT1634; thermus thermophilus HB8, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.75A {Thermus thermophilus} SCOP: d.256.1.1
Probab=28.45 E-value=23 Score=29.70 Aligned_cols=25 Identities=24% Similarity=0.210 Sum_probs=21.1
Q ss_pred cccccccccCCCCC-CCCHHHHHHHH
Q 016581 286 AAIGPGVYDIHSPR-IPSTEEIVDRI 310 (387)
Q Consensus 286 k~l~lGvvd~~s~~-ve~~e~v~~ri 310 (387)
..=++||||..+|. +|+.+++.+|=
T Consensus 126 GrgvlGVvDG~~p~GVE~e~d~~~Rk 151 (161)
T 1vgg_A 126 QRAILGVMDGFTPLGVEDEAEVAWRK 151 (161)
T ss_dssp EEEEEEEEESCCCCEECCHHHHHHHH
T ss_pred CcEEEEEecCCCCCCccCHHHHHHHH
Confidence 46789999999885 99999988873
No 129
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=28.41 E-value=3.1e+02 Score=25.56 Aligned_cols=78 Identities=10% Similarity=0.061 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+. ..+.|..+++.-+..+. .....++++|
T Consensus 55 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 55 EAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR---GRRTLMAGIGALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEEECCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 4677778888889999776653211 111334343334444333333 35678888874455543 3344678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 132 avlv~ 136 (332)
T 2r8w_A 132 ALLLA 136 (332)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99775
No 130
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=28.32 E-value=1.9e+02 Score=27.22 Aligned_cols=59 Identities=17% Similarity=0.211 Sum_probs=35.1
Q ss_pred HHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCch-hHHHHHHcCCCCEEEE
Q 016581 191 VVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITI 265 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~-~i~~~l~~l~vD~i~l 265 (387)
++++..++|+++|++|-+. ++..+.++..++ ..+.+ = +.|+.+ .-+..+.+.+||+|++
T Consensus 243 ea~eAl~aGaD~I~LDn~~------~~~l~~av~~l~-------~~v~i--e-aSGGIt~~~I~~~a~tGVD~isv 302 (320)
T 3paj_A 243 ELEEAISAGADIIMLDNFS------LEMMREAVKINA-------GRAAL--E-NSGNITLDNLKECAETGVDYISV 302 (320)
T ss_dssp HHHHHHHTTCSEEEEESCC------HHHHHHHHHHHT-------TSSEE--E-EESSCCHHHHHHHHTTTCSEEEC
T ss_pred HHHHHHHcCCCEEEECCCC------HHHHHHHHHHhC-------CCCeE--E-EECCCCHHHHHHHHHcCCCEEEE
Confidence 4455566899999999743 222223443332 22232 2 236654 4567788899999985
No 131
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=28.25 E-value=3e+02 Score=24.98 Aligned_cols=78 Identities=10% Similarity=-0.009 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+.+ .+.|..+++..+..+. .....++++|
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~~Gad 97 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG---RVPVIAGAGSNSTAEAIAFVRHAQNAGAD 97 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHHcCCC
Confidence 4677788888999999776653211 1113343433344444333333 4567788774455443 3445678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 98 avlv~ 102 (292)
T 2vc6_A 98 GVLIV 102 (292)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98775
No 132
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=28.24 E-value=1.7e+02 Score=27.18 Aligned_cols=60 Identities=17% Similarity=0.196 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCch-hHHHHHHcCCCCEEEEe
Q 016581 191 VVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIE 266 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~-~i~~~l~~l~vD~i~lE 266 (387)
++++..++|+++|++|... .+..+.+++.+ ... +.+-. .|+.+ .-+..+.+.++|+|++=
T Consensus 221 e~~eAl~aGaD~I~LDn~~------~~~l~~av~~i-------~~~--v~iea-SGGI~~~~i~~~a~tGVD~isvG 281 (298)
T 3gnn_A 221 QLRTALAHGARSVLLDNFT------LDMMRDAVRVT-------EGR--AVLEV-SGGVNFDTVRAIAETGVDRISIG 281 (298)
T ss_dssp HHHHHHHTTCEEEEEESCC------HHHHHHHHHHH-------TTS--EEEEE-ESSCSTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHcCCCEEEECCCC------HHHHHHHHHHh-------CCC--CeEEE-EcCCCHHHHHHHHHcCCCEEEEC
Confidence 4455566899999999743 22222333322 122 33333 36553 45677888999999864
No 133
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=28.21 E-value=3e+02 Score=23.98 Aligned_cols=84 Identities=11% Similarity=0.112 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCC-hHHHHHHHHHHHHHHcCCCCCceEEEEecCC-------CchhHH
Q 016581 181 LPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLD-SHKLQAFIHSFRITNCGIQDTTQIHTHMCYS-------NFNDII 252 (387)
Q Consensus 181 ~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~-~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~g-------n~~~i~ 252 (387)
.+...+.+.+.++...+.|+++|.+.-.... ... .+..+.+++.++.+.+.. .++.+.+|...+ +...+.
T Consensus 84 r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~-~~~~~~~~~~~~~~l~~l~~~~-~gv~l~lEn~~~~~~~~~~~~~~~~ 161 (287)
T 2x7v_A 84 WQKSVELLKKEVEICRKLGIRYLNIHPGSHL-GTGEEEGIDRIVRGLNEVLNNT-EGVVILLENVSQKGGNIGYKLEQLK 161 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCEECT-TSCHHHHHHHHHHHHHHHHTTC-CSCEEEEECCCCCTTEECSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHccc-CCCEEEEeCCCCCCCccCCCHHHHH
Confidence 3445566777777778889999988532221 112 223456788888877643 467888887744 223445
Q ss_pred HHHHcCCC-CE--EEEe
Q 016581 253 HSIIDMDA-DV--ITIE 266 (387)
Q Consensus 253 ~~l~~l~v-D~--i~lE 266 (387)
..+..++- +. +.+|
T Consensus 162 ~l~~~~~~~~~vg~~~D 178 (287)
T 2x7v_A 162 KIRDLVDQRDRVAITYD 178 (287)
T ss_dssp HHHHHCSCGGGEEEEEE
T ss_pred HHHHhcCCCCCeEEEEE
Confidence 55556653 33 4455
No 134
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=28.20 E-value=3.5e+02 Score=24.70 Aligned_cols=79 Identities=11% Similarity=-0.005 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+.+. .+.|..|++.-+..+. .....++++|
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~--rvpviaGvg~~~t~~ai~la~~a~~~Gad 105 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGT--KVKVLAGAGSNATHEAVGLAKFAKEHGAD 105 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTS--SCEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCC--CCeEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 4677788888899999776643111 11133333333344433333331 4678888874445443 3445678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 106 avlv~ 110 (301)
T 3m5v_A 106 GILSV 110 (301)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98876
No 135
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=28.00 E-value=2.4e+02 Score=25.96 Aligned_cols=77 Identities=12% Similarity=0.012 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+ .+.++.+++.+ ..+.|..++...+..+. .....++++|
T Consensus 29 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er---~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gad 104 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEA---EAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAA 104 (313)
T ss_dssp HHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHH---HHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHH---HHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 4677788888999999776653111 111333333 34444444444 46788888774455433 3344577889
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 105 avlv~ 109 (313)
T 3dz1_A 105 GVMIA 109 (313)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88764
No 136
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=27.74 E-value=3.3e+02 Score=25.14 Aligned_cols=78 Identities=8% Similarity=-0.015 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchh---HHHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFND---IIHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~---i~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+. ..+.|..++..-+..+ ......++++|
T Consensus 43 ~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg~~st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 43 KAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA---KRVPVVAGAGSNSTSEAVELAKHAEKAGAD 119 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 4677778888899999776543211 111333333333443333333 3567777776434443 34455688999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 120 avlv~ 124 (315)
T 3si9_A 120 AVLVV 124 (315)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98765
No 137
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=27.51 E-value=2.8e+02 Score=27.96 Aligned_cols=71 Identities=17% Similarity=0.266 Sum_probs=39.6
Q ss_pred HHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHc-CCCCCceEEEEecCCCchhHHHHH--HcCCCCEEE
Q 016581 188 YKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNC-GIQDTTQIHTHMCYSNFNDIIHSI--IDMDADVIT 264 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~-~~~~~~~v~lH~C~gn~~~i~~~l--~~l~vD~i~ 264 (387)
+.+.++++.++||+.|.|=+..=.. .+......+.++...+. .+ .+.+|.|--+|- .+...+ .+.++|.+.
T Consensus 177 ~~~~a~~l~~~Gad~I~L~DT~G~~--~P~~v~~lv~~l~~~~p~~i--~I~~H~Hnd~Gl--AvAN~laAveAGa~~VD 250 (539)
T 1rqb_A 177 YVKLAGQLLDMGADSIALKDMAALL--KPQPAYDIIKAIKDTYGQKT--QINLHCHSTTGV--TEVSLMKAIEAGVDVVD 250 (539)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTCCC--CHHHHHHHHHHHHHHHCTTC--CEEEEEBCTTSC--HHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCCc--CHHHHHHHHHHHHHhcCCCc--eEEEEeCCCCCh--HHHHHHHHHHhCCCEEE
Confidence 3444455677899999998866443 33322234444444443 22 345566655553 445555 356787764
No 138
>1wvq_A Hypothetical protein PAE2307; phosphorylated histidine, structural genomics, unknown funct; HET: NEP; 1.45A {Pyrobaculum aerophilum} PDB: 2gl0_A* 2jb7_A*
Probab=27.25 E-value=24 Score=29.68 Aligned_cols=27 Identities=26% Similarity=0.185 Sum_probs=22.0
Q ss_pred cccccccccCCCCC-CCCHHHHHHHHHH
Q 016581 286 AAIGPGVYDIHSPR-IPSTEEIVDRIYE 312 (387)
Q Consensus 286 k~l~lGvvd~~s~~-ve~~e~v~~ri~~ 312 (387)
..=++||||..+|. +|+.+++.+|=+-
T Consensus 131 GrgvlGVvDG~~P~GVE~e~d~~~Rk~l 158 (167)
T 1wvq_A 131 RRGVVGVVDGHSPLGVETEKDREERKKF 158 (167)
T ss_dssp EEEEEEEEESCCCCEECCHHHHHHHHHH
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHH
Confidence 36789999999885 9999999888443
No 139
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=27.12 E-value=3.4e+02 Score=24.81 Aligned_cols=78 Identities=6% Similarity=0.011 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHH---HHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDII---HSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~---~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+.+ .+.|..+++.-+..+.+ ....++++|
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g---rvpViaGvg~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 33 ESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG---KIPVIVGAGTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC---CCeEEEcCCCccHHHHHHHHHHHHhcCCC
Confidence 4677788888999999776653211 1123344433344444333333 46777887744544433 344578999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 110 avlv~ 114 (306)
T 1o5k_A 110 GVLVV 114 (306)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98765
No 140
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=27.11 E-value=2.3e+02 Score=25.05 Aligned_cols=25 Identities=12% Similarity=0.294 Sum_probs=20.9
Q ss_pred HHHHHHHhhcCCCcEEEcCCCCCCC
Q 016581 308 DRIYEMRTVLETNILWVNPDCGLKT 332 (387)
Q Consensus 308 ~ri~~a~~~v~~~~l~isPdCGl~~ 332 (387)
+.++++++.+|.+|+.+.+|+.+..
T Consensus 195 ~~l~~~i~~~~~driL~eTD~P~~~ 219 (268)
T 1j6o_A 195 EALREVVKRVGLEYIVLETDCPFLP 219 (268)
T ss_dssp HHHHHHHHHHCGGGEEECCCBTSCC
T ss_pred HHHHHHHHhCChhhEEEecCCCCCC
Confidence 4567888889999999999998753
No 141
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=26.87 E-value=3.6e+02 Score=24.45 Aligned_cols=78 Identities=5% Similarity=0.011 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHH-cCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCC
Q 016581 186 PIYKEVVSELKA-AGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDA 260 (387)
Q Consensus 186 ~~~~~~i~~L~~-aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~v 260 (387)
+++++.++.+.+ .|++-|.+---.- ...|..+.+...++.....+. ..+.|..+++.-+..+. .....++++
T Consensus 24 ~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Ga 100 (293)
T 1f6k_A 24 KGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK---DQIALIAQVGSVNLKEAVELGKYATELGY 100 (293)
T ss_dssp HHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT---TSSEEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC---CCCeEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 467778888889 9999776653211 111334343333443333333 35678888874455443 334457899
Q ss_pred CEEEEe
Q 016581 261 DVITIE 266 (387)
Q Consensus 261 D~i~lE 266 (387)
|++.+=
T Consensus 101 davlv~ 106 (293)
T 1f6k_A 101 DCLSAV 106 (293)
T ss_dssp SEEEEE
T ss_pred CEEEEC
Confidence 998765
No 142
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=26.82 E-value=3e+02 Score=25.77 Aligned_cols=78 Identities=15% Similarity=0.045 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHH---HHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDII---HSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~---~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+. ..+.|..+++.-+..+.+ ....++++|
T Consensus 52 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 52 PGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD---RRVPVLIGTGGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp HHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECCSSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 4677788888899998666642111 111333343334444333333 356788887744544433 344578999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 129 avlv~ 133 (343)
T 2v9d_A 129 GIVVI 133 (343)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 98765
No 143
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=26.76 E-value=1e+02 Score=23.45 Aligned_cols=26 Identities=8% Similarity=0.153 Sum_probs=21.9
Q ss_pred HHHHHHHHHhh-C----CCCCHHHHHHHHHH
Q 016581 15 RELKFALESFW-D----GKSSAEDLQKVSAD 40 (387)
Q Consensus 15 ~eL~~a~e~~~-~----g~i~~~~l~~~~~~ 40 (387)
.+|++|...|. + |.||.+||+.++..
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~ 40 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQK 40 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHH
Confidence 67999999996 2 67999999998875
No 144
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=26.63 E-value=3.6e+02 Score=24.43 Aligned_cols=124 Identities=15% Similarity=0.196 Sum_probs=63.9
Q ss_pred HHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEec----CCCch-------hHHHHHHcCC-
Q 016581 192 VSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMC----YSNFN-------DIIHSIIDMD- 259 (387)
Q Consensus 192 i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C----~gn~~-------~i~~~l~~l~- 259 (387)
++.+.+.|++.|.+-==.|......+.....+..++..+..+ ++.+++= .|.+. .++....+++
T Consensus 58 ~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~----PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~ 133 (276)
T 3o1n_A 58 ALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDK----PLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGL 133 (276)
T ss_dssp HHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSS----CEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCC----CEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCC
Confidence 344455799987764212322111122223444555544444 3444332 14432 4566667777
Q ss_pred CCEEEEecCCCChhhhHHh----hhccCCCcccccccccCCC-CCCCCHHHHHHHHHHHHhhcCC--CcEEEcCC
Q 016581 260 ADVITIENSRSNENLLSVF----REGVQYDAAIGPGVYDIHS-PRIPSTEEIVDRIYEMRTVLET--NILWVNPD 327 (387)
Q Consensus 260 vD~i~lE~~r~~~e~L~~~----~~~~~~~k~l~lGvvd~~s-~~ve~~e~v~~ri~~a~~~v~~--~~l~isPd 327 (387)
+|.+.+|.... .+.++.+ ++ .+.++ +++.|+ ...++.+++.++++++.+. ++ -++.+.|.
T Consensus 134 ~dyIDvEl~~~-~~~~~~l~~~a~~---~~~kv---I~S~Hdf~~tP~~~el~~~~~~~~~~-GaDIvKia~~a~ 200 (276)
T 3o1n_A 134 VDMIDLELFTG-DDEVKATVGYAHQ---HNVAV---IMSNHDFHKTPAAEEIVQRLRKMQEL-GADIPKIAVMPQ 200 (276)
T ss_dssp CSEEEEEGGGC-HHHHHHHHHHHHH---TTCEE---EEEEEESSCCCCHHHHHHHHHHHHHT-TCSEEEEEECCS
T ss_pred CCEEEEECcCC-HHHHHHHHHHHHh---CCCEE---EEEeecCCCCcCHHHHHHHHHHHHHc-CCCEEEEEecCC
Confidence 99999996443 2333332 23 12233 233343 2356788999999997654 33 45555553
No 145
>2xf7_A GP23.1; viral protein; 1.61A {Bacillus phage SPP1} PDB: 2xf5_A 2xf6_A
Probab=26.53 E-value=70 Score=20.98 Aligned_cols=21 Identities=24% Similarity=0.442 Sum_probs=15.2
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHH
Q 016581 15 RELKFALESFWDGKSSAEDLQKVS 38 (387)
Q Consensus 15 ~eL~~a~e~~~~g~i~~~~l~~~~ 38 (387)
.+|++|.++ |+|+.+|..++.
T Consensus 22 ~~mR~AV~~---G~iTQ~E~D~I~ 42 (51)
T 2xf7_A 22 ELLRVAVNA---GDLTQEEADKIM 42 (51)
T ss_dssp HHHHHHHHH---TSSCHHHHHHHH
T ss_pred HHHHHHHhc---CcccHHHHHHHH
Confidence 456666665 888888887764
No 146
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=26.53 E-value=3.1e+02 Score=25.30 Aligned_cols=78 Identities=10% Similarity=0.020 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+ ...+.|..|+..-+..+. .....++++|
T Consensus 32 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~---~grvpviaGvg~~~t~~ai~la~~a~~~Gad 108 (318)
T 3qfe_A 32 ASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAV---GPDFPIMAGVGAHSTRQVLEHINDASVAGAN 108 (318)
T ss_dssp HHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHH---CTTSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHh---CCCCcEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 4677888889999999776653221 11133434333444433333 335678888774344433 3445678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 109 avlv~ 113 (318)
T 3qfe_A 109 YVLVL 113 (318)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98875
No 147
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=26.46 E-value=2.3e+02 Score=27.05 Aligned_cols=78 Identities=6% Similarity=-0.059 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.. ++.+...+.|..++..-+..+. .....++++|
T Consensus 80 ~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~---ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 156 (360)
T 4dpp_A 80 EAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHT---VNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMH 156 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHH---HHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHH---HHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 4677778888899999776642111 1113333333333333 3333335678788764344443 3344678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 157 avlvv 161 (360)
T 4dpp_A 157 AALHI 161 (360)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98775
No 148
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=26.37 E-value=1.1e+02 Score=27.70 Aligned_cols=78 Identities=14% Similarity=0.103 Sum_probs=41.9
Q ss_pred CceEEEEecCCC----chhHHHHHHcCCCC---EEEEecCCCChhhhHHhhhccCCCcccccc----cccCCCCCCCCHH
Q 016581 236 TTQIHTHMCYSN----FNDIIHSIIDMDAD---VITIENSRSNENLLSVFREGVQYDAAIGPG----VYDIHSPRIPSTE 304 (387)
Q Consensus 236 ~~~v~lH~C~gn----~~~i~~~l~~l~vD---~i~lE~~r~~~e~L~~~~~~~~~~k~l~lG----vvd~~s~~ve~~e 304 (387)
+..|.+|.-.++ ..++++.|.+.+++ ++.+-. +.+.++.+-+ .|-.+++| ++..+
T Consensus 123 ~lPv~iH~r~~~~~~a~~~~~~il~~~~~~~~~~vi~H~---~~~~a~~~l~---~G~yis~~~~pg~~t~~-------- 188 (261)
T 3guw_A 123 DVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHV---NFETLDMVLE---TEYWIGLTVQPGKLSAE-------- 188 (261)
T ss_dssp TCCEEEECCSSSTTHHHHHHHHHHHHTTCCTTSEEEESC---CTTTHHHHHT---SSSEEEEECC---------------
T ss_pred CCeEEEEcCCCcccchHHHHHHHHHHcCCCCCCEEEEeC---CHHHHHHHHh---CCEEEEecCCCCcccHH--------
Confidence 346777865321 35667777665433 222222 3444444433 24455554 33322
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCC
Q 016581 305 EIVDRIYEMRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 305 ~v~~ri~~a~~~v~~~~l~isPdCGl~ 331 (387)
+.+++++.+|.+++.+.+||.+.
T Consensus 189 ----~~~~~v~~ipldrlLlETD~P~~ 211 (261)
T 3guw_A 189 ----DAARIVAEHGPERFMLNSDAGYR 211 (261)
T ss_dssp ----CCTTGGGGCC-CCEEEECCCCCC
T ss_pred ----HHHHHHHhCCcceEEEecCCCCC
Confidence 12467888999999999999984
No 149
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=26.18 E-value=1.8e+02 Score=27.28 Aligned_cols=71 Identities=15% Similarity=0.139 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCC-CCceEEEEecCCCchhHHHHH--HcCCCCEE
Q 016581 187 IYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQ-DTTQIHTHMCYSNFNDIIHSI--IDMDADVI 263 (387)
Q Consensus 187 ~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~-~~~~v~lH~C~gn~~~i~~~l--~~l~vD~i 263 (387)
.+.+.++.+.++||+.|.|=|..=.. .+. .+.+.++.+.+.+| ..+.+|.|--+|- .+...+ .+.+++.+
T Consensus 170 ~~~~~~~~~~~~Ga~~i~l~DT~G~~--~P~---~v~~lv~~l~~~~p~~~i~~H~Hnd~Gl--A~AN~laAv~aGa~~v 242 (337)
T 3ble_A 170 YVKSLVEHLSKEHIERIFLPDTLGVL--SPE---ETFQGVDSLIQKYPDIHFEFHGHNDYDL--SVANSLQAIRAGVKGL 242 (337)
T ss_dssp HHHHHHHHHHTSCCSEEEEECTTCCC--CHH---HHHHHHHHHHHHCTTSCEEEECBCTTSC--HHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCc--CHH---HHHHHHHHHHHhcCCCeEEEEecCCcch--HHHHHHHHHHhCCCEE
Confidence 34455566788899999998875443 332 23344444444443 2344444444443 445555 35678876
Q ss_pred E
Q 016581 264 T 264 (387)
Q Consensus 264 ~ 264 (387)
.
T Consensus 243 d 243 (337)
T 3ble_A 243 H 243 (337)
T ss_dssp E
T ss_pred E
Confidence 4
No 150
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=26.13 E-value=1.4e+02 Score=27.39 Aligned_cols=63 Identities=8% Similarity=0.092 Sum_probs=36.1
Q ss_pred HHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCch-hHHHHHHcCCCCEEEEe
Q 016581 191 VVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITIE 266 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~-~i~~~l~~l~vD~i~lE 266 (387)
++++..++|+++|++|-. .++..+.+++.++... ....+ .+.|+.+ +-+..+.++++|+|++=
T Consensus 206 ea~eal~aGaD~I~LDn~------~~~~~~~~v~~l~~~~----~~v~i---eaSGGIt~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 206 QLDAVLPEKPELILLDNF------AVWQTQTAVQRRDSRA----PTVML---ESSGGLSLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp HHHHHGGGCCSEEEEETC------CHHHHHHHHHHHHHHC----TTCEE---EEESSCCTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHcCCCEEEECCC------CHHHHHHHHHHhhccC----CCeEE---EEECCCCHHHHHHHHhcCCCEEEEC
Confidence 555566689999999973 2333234455443321 12222 2235553 45777888899999843
No 151
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=25.69 E-value=95 Score=29.49 Aligned_cols=61 Identities=15% Similarity=0.287 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEec
Q 016581 180 LLPKILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMC 244 (387)
Q Consensus 180 l~~~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C 244 (387)
-++++..+|.+.+....++|.++|-+--=.|+..-.+ .+-+...++++++.+.. .|++|--
T Consensus 131 ~l~~V~~AY~EQ~~~Ve~~G~~~ILMASRaLA~~A~~--pdDY~~VY~~vL~q~~~--PVILHWL 191 (396)
T 4dnh_A 131 SIDDILAAYESQIEAIEAEGGRIILMASRALAAAAKG--PEDYIRVYDRVLSQVKE--PVIIHWL 191 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEECCCHHHHHHCCS--HHHHHHHHHHHHHHCSS--CEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEehhHHHHHHhCC--HHHHHHHHHHHHHhcCC--CEEEEec
Confidence 3688999999999999999999887765444331111 12467888888888854 6788864
No 152
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=25.67 E-value=1.9e+02 Score=27.35 Aligned_cols=31 Identities=13% Similarity=0.281 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecC
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDE 207 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDE 207 (387)
+.++ ++.+.+.|.+..+.+.++|++.|+|+-
T Consensus 152 t~~e-I~~~i~~f~~aA~~a~~aGfDgVeih~ 182 (365)
T 2gou_A 152 TKAD-IAQVIADYRQAALNAMEAGFDGIELHA 182 (365)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 4444 456777888888888899999999975
No 153
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=25.60 E-value=82 Score=23.37 Aligned_cols=26 Identities=23% Similarity=0.414 Sum_probs=22.2
Q ss_pred HHHHHHHHHhh--CCCCCHHHHHHHHHH
Q 016581 15 RELKFALESFW--DGKSSAEDLQKVSAD 40 (387)
Q Consensus 15 ~eL~~a~e~~~--~g~i~~~~l~~~~~~ 40 (387)
.+|+++...|. .|.|+.++|..++..
T Consensus 9 ~~l~~~F~~fD~~dg~Is~~El~~~l~~ 36 (96)
T 1a4p_A 9 ETMMFTFHKFAGDKGYLTKEDLRVLMEK 36 (96)
T ss_dssp HHHHHHHHHHHGGGCSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCeECHHHHHHHHHH
Confidence 57888888887 588999999999865
No 154
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=25.28 E-value=4.1e+02 Score=24.60 Aligned_cols=126 Identities=10% Similarity=0.033 Sum_probs=62.8
Q ss_pred HHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchh---HHHHHHcCCCCEEEEe
Q 016581 190 EVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFND---IIHSIIDMDADVITIE 266 (387)
Q Consensus 190 ~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~---i~~~l~~l~vD~i~lE 266 (387)
+.++.|.++|++.|.+=-|... +... +.++.+.+.++ +..+. -+|+++-.. .++.+...+++.+.+=
T Consensus 32 ~ia~~L~~~Gv~~IE~g~p~~~----~~d~----e~v~~i~~~~~-~~~i~-~l~r~~~~~i~~a~~al~~ag~~~v~i~ 101 (325)
T 3eeg_A 32 IVAKALDELGVDVIEAGFPVSS----PGDF----NSVVEITKAVT-RPTIC-ALTRAKEADINIAGEALRFAKRSRIHTG 101 (325)
T ss_dssp HHHHHHHHHTCSEEEEECTTSC----HHHH----HHHHHHHHHCC-SSEEE-EECCSCHHHHHHHHHHHTTCSSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCCCC----HhHH----HHHHHHHHhCC-CCEEE-EeecCCHHHHHHHHHhhcccCCCEEEEE
Confidence 4455677789999988655432 2221 12222223333 23333 334455432 2334444578877664
Q ss_pred cCCCCh-----------hh-------hHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcCCC
Q 016581 267 NSRSNE-----------NL-------LSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNPDC 328 (387)
Q Consensus 267 ~~r~~~-----------e~-------L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isPdC 328 (387)
.+.++. +. ++..++ .+..+.+|.-|.. .-+++.+.+.++++.+. +++.+.+.---
T Consensus 102 ~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~---~g~~v~f~~~d~~---~~~~~~~~~~~~~~~~~-G~~~i~l~DT~ 174 (325)
T 3eeg_A 102 IGSSDIHIEHKLRSTRENILEMAVAAVKQAKK---VVHEVEFFCEDAG---RADQAFLARMVEAVIEA-GADVVNIPDTT 174 (325)
T ss_dssp EECSHHHHC----CCCTTGGGTTHHHHHHHHT---TSSEEEEEEETGG---GSCHHHHHHHHHHHHHH-TCSEEECCBSS
T ss_pred ecccHHHHHHHhCCCHHHHHHHHHHHHHHHHH---CCCEEEEEccccc---cchHHHHHHHHHHHHhc-CCCEEEecCcc
Confidence 222211 11 222232 2445666665543 23566666666655443 67777777666
Q ss_pred CCCC
Q 016581 329 GLKT 332 (387)
Q Consensus 329 Gl~~ 332 (387)
|..+
T Consensus 175 G~~~ 178 (325)
T 3eeg_A 175 GYML 178 (325)
T ss_dssp SCCC
T ss_pred CCcC
Confidence 6653
No 155
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=25.22 E-value=3.1e+02 Score=24.96 Aligned_cols=78 Identities=10% Similarity=-0.045 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++.....+.+ .+.|..+++.-+..+. .....++++|
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG---RVPVIAGAGSNNPVEAVRYAQHAQQAGAD 97 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC---CCeEEEccCCCCHHHHHHHHHHHHhcCCC
Confidence 4677788888899999776653211 1113343433344443333333 4667788774444443 3444678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 98 avlv~ 102 (297)
T 2rfg_A 98 AVLCV 102 (297)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 98775
No 156
>1fvp_A Flavoprotein 390, FP390; flavin-binding protein; HET: FMA; 2.70A {Photobacterium phosphoreum} SCOP: c.1.16.2
Probab=25.11 E-value=1.1e+02 Score=26.43 Aligned_cols=45 Identities=7% Similarity=-0.089 Sum_probs=31.8
Q ss_pred CCCCHHHHHH-HHHHHHhhcCCCcEEEcCCCCCCCCChhhHHHHHHHHH
Q 016581 299 RIPSTEEIVD-RIYEMRTVLETNILWVNPDCGLKTRKYTEVKPALSNMV 346 (387)
Q Consensus 299 ~ve~~e~v~~-ri~~a~~~v~~~~l~isPdCGl~~~~~~~a~~kL~~lv 346 (387)
.+.|||+|++ +|++..+..+.+.+++..+.+. +.+...+.|+.+.
T Consensus 173 ~vGtpe~v~~~~l~~~~~~~G~de~~~~~~~~~---~~~~~~~slel~a 218 (231)
T 1fvp_A 173 VTGSYKDCLSYVANLAGKFDNTVDFLLCFESMQ---DQNKKKSVMIDLN 218 (231)
T ss_dssp CEESSHHHHHHHHHHHHHTTTCEEEEECCCSCC---CHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHHHhCcCeEEEEecCCC---CHHHHHHHHHHHH
Confidence 4789999999 9999999889999998654332 2333444444443
No 157
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=24.90 E-value=93 Score=22.39 Aligned_cols=26 Identities=15% Similarity=0.157 Sum_probs=20.9
Q ss_pred CcHHHHHHHHHhhCCC--CCHHHHHHHH
Q 016581 13 PKRELKFALESFWDGK--SSAEDLQKVS 38 (387)
Q Consensus 13 ~~~eL~~a~e~~~~g~--i~~~~l~~~~ 38 (387)
...+|++|.+-|..|+ |+.++|+..+
T Consensus 8 ~~eel~eAFr~f~dg~G~It~~eLr~~l 35 (75)
T 1h8b_A 8 TAEQVIASFRILASDKPYILAEELRREL 35 (75)
T ss_dssp THHHHHHHHHHHTTSCSSBCHHHHHHHS
T ss_pred CHHHHHHHHHHHhcCCCCcCHHHHHhcC
Confidence 3579999999995444 9999999954
No 158
>3a1g_A RNA-directed RNA polymerase catalytic subunit; influenza virus, RNA polymerase, nucleotide-binding, nucleotidyltransferase, nucleus, RNA replication; 1.70A {Influenza a virus} PDB: 2ztt_A
Probab=24.52 E-value=63 Score=23.63 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=21.6
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHH
Q 016581 15 RELKFALESFWDGKSSAEDLQKVSA 39 (387)
Q Consensus 15 ~eL~~a~e~~~~g~i~~~~l~~~~~ 39 (387)
+-+..|+-+|..|.|+.++++++.+
T Consensus 44 rlr~dAr~d~esGri~k~efeeim~ 68 (80)
T 3a1g_A 44 RARIDARIDFESGRIKKEEFTEIMK 68 (80)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred HHHHHHhhhhhhccccHHHHHHHHH
Confidence 5577899999999999999988764
No 159
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=24.39 E-value=4.9e+02 Score=25.17 Aligned_cols=30 Identities=10% Similarity=0.050 Sum_probs=26.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcEEEcCCCC
Q 016581 300 IPSTEEIVDRIYEMRTVLETNILWVNPDCG 329 (387)
Q Consensus 300 ve~~e~v~~ri~~a~~~v~~~~l~isPdCG 329 (387)
..|++.+++-|+-+.+.++.+.+.|..|..
T Consensus 333 ~atl~~~~~Hidhi~~~~G~dhVgiGsDfD 362 (417)
T 2rag_A 333 RGDFDLYMKSMLHVLKVAGPKGVCVGADWD 362 (417)
T ss_dssp CCBHHHHHHHHHHHHHHHCTTSEEECCCTT
T ss_pred CCCHHHHHHHHHHHHHhcCCceEEEccCCC
Confidence 357999999999999999999999999943
No 160
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=24.23 E-value=79 Score=22.90 Aligned_cols=24 Identities=25% Similarity=0.307 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEec
Q 016581 183 KILPIYKEVVSELKAAGASWIQFD 206 (387)
Q Consensus 183 ~la~~~~~~i~~L~~aG~~~IQiD 206 (387)
.|-.++.+.-++|.++|++-|||.
T Consensus 30 eleralqelekalaragarnvqit 53 (96)
T 2jvf_A 30 ELERALQELEKALARAGARNVQIT 53 (96)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHHhccccceEEE
Confidence 345667777788999999999996
No 161
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=23.26 E-value=3e+02 Score=25.38 Aligned_cols=77 Identities=16% Similarity=0.103 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHH---HHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDII---HSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~---~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+...++. +++.+...+.|..+++ .+..+.+ ....++++|
T Consensus 33 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~---~v~~~~grvpViaGvg-~~t~~ai~la~~A~~~Gad 108 (316)
T 3e96_A 33 HHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRR---TVEYVHGRALVVAGIG-YATSTAIELGNAAKAAGAD 108 (316)
T ss_dssp HHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHH---HHHHHTTSSEEEEEEC-SSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHH---HHHHhCCCCcEEEEeC-cCHHHHHHHHHHHHhcCCC
Confidence 4677888888899998766553211 111333333333333 3333333567888887 3665443 344578999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 109 avlv~ 113 (316)
T 3e96_A 109 AVMIH 113 (316)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99864
No 162
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=23.09 E-value=4e+02 Score=23.70 Aligned_cols=90 Identities=12% Similarity=0.084 Sum_probs=47.2
Q ss_pred ceEEEEec-CC-CchhHHHHHHcCCCC--EEEEe-cCC-CChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHH
Q 016581 237 TQIHTHMC-YS-NFNDIIHSIIDMDAD--VITIE-NSR-SNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRI 310 (387)
Q Consensus 237 ~~v~lH~C-~g-n~~~i~~~l~~l~vD--~i~lE-~~r-~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri 310 (387)
..|.+|+. +| ...++++.|.+.+++ .+.+. ..+ .+.+.+..+.+ .+-.++++-... ....+.+...+.+
T Consensus 165 ~pv~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~---~G~~i~~~~~~~--~~~~~~~~~~~~i 239 (314)
T 2vc7_A 165 VPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDTDNIDYIKKIAD---KGSFIGLDRYGL--DLFLPVDKRNETT 239 (314)
T ss_dssp CCEEEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGGCCCHHHHHHHHH---TTCEEEECCTTC--TTTSCHHHHHHHH
T ss_pred CEEEEeCCCcccChHHHHHHHHHcCCCcccEEEECCCCCCCHHHHHHHHH---cCCEEEEeCCCc--ccCCCHHHHHHHH
Confidence 35778864 22 223566666665553 33333 212 24555555544 133444442111 0113445566666
Q ss_pred HHHHhhcCCCcEEEcCCCCCC
Q 016581 311 YEMRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 311 ~~a~~~v~~~~l~isPdCGl~ 331 (387)
.+.++.-+.+++.+++||+..
T Consensus 240 ~~~~~~g~~drilleTD~~~~ 260 (314)
T 2vc7_A 240 LRLIKDGYSDKIMISHDYCCT 260 (314)
T ss_dssp HHHHHTTCTTTEEECCCCBSS
T ss_pred HHHHHcCCCCeEEEcCCcccc
Confidence 666665456999999999653
No 163
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=23.03 E-value=2.1e+02 Score=25.93 Aligned_cols=67 Identities=7% Similarity=0.030 Sum_probs=36.9
Q ss_pred HHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEe--cCCCchhHHHHH--HcCCCCEEEE
Q 016581 191 VVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHM--CYSNFNDIIHSI--IDMDADVITI 265 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~--C~gn~~~i~~~l--~~l~vD~i~l 265 (387)
.++.+.++||+.|.|-++.-. ..+. ...+.++.+.+.++ ++.+++|. .+|- .+...+ .+.+++.+..
T Consensus 160 ~~~~~~~~G~d~i~l~Dt~G~--~~P~---~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gl--a~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 160 VTEQLFSLGCHEVSLGDTIGR--GTPD---TVAAMLDAVLAIAP-AHSLAGHYHDTGGR--ALDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp HHHHHHHHTCSEEEEEETTSC--CCHH---HHHHHHHHHHTTSC-GGGEEEEEBCTTSC--HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCCEEEecCCCCC--cCHH---HHHHHHHHHHHhCC-CCeEEEEECCCcch--HHHHHHHHHHhCCCEEEe
Confidence 334456679998888875433 2332 34555666666665 23455554 6663 333333 3457776653
No 164
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=22.93 E-value=3.1e+02 Score=23.74 Aligned_cols=24 Identities=13% Similarity=0.198 Sum_probs=20.2
Q ss_pred HHHHHHHhhcCCCcEEEcCCCCCC
Q 016581 308 DRIYEMRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 308 ~ri~~a~~~v~~~~l~isPdCGl~ 331 (387)
+.++++++.+|++|+.+.+|+.+.
T Consensus 188 ~~l~~~~~~~~~drll~eTD~P~~ 211 (264)
T 1xwy_A 188 LELRELLPLIPAEKLLIETDAPYL 211 (264)
T ss_dssp HHHHHHGGGSCGGGEEECCCTTSC
T ss_pred HHHHHHHHhCCHHHEEEecCCCCc
Confidence 356778889999999999999764
No 165
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=22.63 E-value=3.2e+02 Score=25.15 Aligned_cols=78 Identities=9% Similarity=0.044 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhHH---HHHHcCCC-
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDII---HSIIDMDA- 260 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i~---~~l~~l~v- 260 (387)
+++++.++.+.+.|++-|.+---.- ...|..+. -.+.++.+++.+...+.|..|++.-+..+.+ ....++++
T Consensus 28 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~E---r~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~ 104 (311)
T 3h5d_A 28 DAIPALIEHLLAHHTDGILLAGTTAESPTLTHDE---ELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGF 104 (311)
T ss_dssp THHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHH---HHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHH---HHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCC
Confidence 4677778888899998666553211 11133333 3444444555444567788887744555433 34557776
Q ss_pred CEEEEe
Q 016581 261 DVITIE 266 (387)
Q Consensus 261 D~i~lE 266 (387)
|++.+=
T Consensus 105 davlv~ 110 (311)
T 3h5d_A 105 AAGLAI 110 (311)
T ss_dssp SEEEEE
T ss_pred cEEEEc
Confidence 988765
No 166
>1rlh_A Conserved hypothetical protein; structural genomics, T. acidophilum, PSI, protein structure initiative; 1.80A {Thermoplasma acidophilum} SCOP: d.256.1.1
Probab=22.52 E-value=26 Score=29.57 Aligned_cols=24 Identities=33% Similarity=0.293 Sum_probs=14.3
Q ss_pred cccccccccCCCC-CCCCHHHHHHH
Q 016581 286 AAIGPGVYDIHSP-RIPSTEEIVDR 309 (387)
Q Consensus 286 k~l~lGvvd~~s~-~ve~~e~v~~r 309 (387)
..=++||||..+| .+|+.+++++|
T Consensus 138 GRgvlGVvDG~~P~GVE~eed~~~R 162 (173)
T 1rlh_A 138 GNGVLGVIDGYSPVGVESDADIEKR 162 (173)
T ss_dssp SEEEEEEEESCCCCSCCC-------
T ss_pred CcEEEEEecCCCCCCccCHHHHHHH
Confidence 3678999999887 59999998877
No 167
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=22.43 E-value=4.1e+02 Score=23.61 Aligned_cols=23 Identities=22% Similarity=0.377 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCCEEEecCccc
Q 016581 188 YKEVVSELKAAGASWIQFDEPLL 210 (387)
Q Consensus 188 ~~~~i~~L~~aG~~~IQiDEP~l 210 (387)
..+.++.|.++|+++|.++=|..
T Consensus 33 ~~~~~~~l~~~GaD~ieig~P~s 55 (268)
T 1qop_A 33 SLKIIDTLIDAGADALELGVPFS 55 (268)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCS
T ss_pred HHHHHHHHHHCCCCEEEECCCCC
Confidence 35677889999999999998874
No 168
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=22.29 E-value=1.9e+02 Score=27.63 Aligned_cols=114 Identities=11% Similarity=0.034 Sum_probs=56.7
Q ss_pred HHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCC--CceEEEE--ecCCCchhHHHHHH--cCCCCE
Q 016581 189 KEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQD--TTQIHTH--MCYSNFNDIIHSII--DMDADV 262 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~--~~~v~lH--~C~gn~~~i~~~l~--~l~vD~ 262 (387)
.+.++.+.++||+.|-|=+..=.. .|.+ +.+.+..+.+.++. ++.+++| --+|- .+...+. +.+++.
T Consensus 160 ~~~~~~~~~~Ga~~i~l~DT~G~~-~P~~----~~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gl--AvAN~laAv~aGa~~ 232 (370)
T 3rmj_A 160 AEICGAVIEAGATTINIPDTVGYS-IPYK----TEEFFRELIAKTPNGGKVVWSAHCHNDLGL--AVANSLAALKGGARQ 232 (370)
T ss_dssp HHHHHHHHHHTCCEEEEECSSSCC-CHHH----HHHHHHHHHHHSTTGGGSEEEEECBCTTSC--HHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHcCCCEEEecCccCCc-CHHH----HHHHHHHHHHhCCCcCceEEEEEeCCCCCh--HHHHHHHHHHhCCCE
Confidence 344455667799999998876443 2332 23333333444442 1345555 34443 5566664 567777
Q ss_pred EEEe----cCCC---Chhhh-HHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhh
Q 016581 263 ITIE----NSRS---NENLL-SVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTV 316 (387)
Q Consensus 263 i~lE----~~r~---~~e~L-~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~ 316 (387)
+.-= ..|. +.|.+ -.+.. +.=..|+-. ...++...++.+.+.++...
T Consensus 233 vd~tv~GlGeraGN~~lE~vv~~L~~-----~~~~~g~~t--gidl~~L~~~s~~v~~~~g~ 287 (370)
T 3rmj_A 233 VECTVNGLGERAGNASVEEIVMALKV-----RHDLFGLET--GIDTTQIVPSSKLVSTITGY 287 (370)
T ss_dssp EEEBGGGCSSTTCBCBHHHHHHHHHH-----THHHHCCBC--CCCGGGHHHHHHHHHHHHTC
T ss_pred EEEeccccCcccccccHHHHHHHHHh-----hhhccCCCC--CcCHHHHHHHHHHHHHHhCC
Confidence 6432 1122 23322 22321 100123221 12356677777777777654
No 169
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=21.92 E-value=1.7e+02 Score=26.50 Aligned_cols=62 Identities=13% Similarity=0.013 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCC-CCCceEEEEecCC
Q 016581 183 KILPIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGI-QDTTQIHTHMCYS 246 (387)
Q Consensus 183 ~la~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~-~~~~~v~lH~C~g 246 (387)
...+.+.+.++...+.||++|.+ |........+..+.+++.++.+.+-. +.++.+.+|-+.+
T Consensus 111 ~~~~~~~~~i~~A~~lG~~~v~~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 111 KFDEFWKKATDIHAELGVSCMVQ--PSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEE--CCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred HHHHHHHHHHHHHHHcCCCEEEe--CCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 34456777777788889998887 44332222333456778888776533 2367888887643
No 170
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=21.61 E-value=4.5e+02 Score=23.76 Aligned_cols=111 Identities=11% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCEEEecCccccc------CCChHH-HHHHHHHHHHHHcCCCCCceEEEEecCC---------Cch---
Q 016581 189 KEVVSELKAAGASWIQFDEPLLVM------DLDSHK-LQAFIHSFRITNCGIQDTTQIHTHMCYS---------NFN--- 249 (387)
Q Consensus 189 ~~~i~~L~~aG~~~IQiDEP~l~~------~l~~~~-~~~a~~~~~~~~~~~~~~~~v~lH~C~g---------n~~--- 249 (387)
.+.++...++|++.|.|-.+..-. ....+. .+.+.++++.+.+. +..+...+|+. +.+
T Consensus 83 ~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~---G~~v~~~l~~~~~~~~~~~~~~~~~~ 159 (298)
T 2cw6_A 83 LKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSA---NISVRGYVSCALGCPYEGKISPAKVA 159 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHT---TCEEEEEEETTTCBTTTBSCCHHHHH
T ss_pred HHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC---CCeEEEEEEEEeeCCcCCCCCHHHHH
Q ss_pred hHHHHHHcCCCCEEEEecCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHHhhcCCCcEEEcC--C
Q 016581 250 DIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMRTVLETNILWVNP--D 327 (387)
Q Consensus 250 ~i~~~l~~l~vD~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~~~v~~~~l~isP--d 327 (387)
+++..+.++++|.++|-+... .-+|+++.+.++...+.+|.-.+.+.. +
T Consensus 160 ~~~~~~~~~Ga~~i~l~DT~G-----------------------------~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~ 210 (298)
T 2cw6_A 160 EVTKKFYSMGCYEISLGDTIG-----------------------------VGTPGIMKDMLSAVMQEVPLAALAVHCHDT 210 (298)
T ss_dssp HHHHHHHHTTCSEEEEEETTS-----------------------------CCCHHHHHHHHHHHHHHSCGGGEEEEEBCT
T ss_pred HHHHHHHHcCCCEEEecCCCC-----------------------------CcCHHHHHHHHHHHHHhCCCCeEEEEECCC
Q ss_pred CCCC
Q 016581 328 CGLK 331 (387)
Q Consensus 328 CGl~ 331 (387)
+|++
T Consensus 211 ~Gla 214 (298)
T 2cw6_A 211 YGQA 214 (298)
T ss_dssp TSCH
T ss_pred CchH
No 171
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=21.35 E-value=3.2e+02 Score=24.97 Aligned_cols=75 Identities=15% Similarity=0.140 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCC-CCceEEEEecCCCchhHHHHH--HcCCCCE
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQ-DTTQIHTHMCYSNFNDIIHSI--IDMDADV 262 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~-~~~~v~lH~C~gn~~~i~~~l--~~l~vD~ 262 (387)
+.+.+.++.+.++||+.|.|=+..=.. .+......+..+...+.+++ ..+.+|.|--+|- .+...+ .+.+++.
T Consensus 150 ~~~~~~~~~~~~~G~~~i~l~DT~G~~--~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gl--a~AN~laA~~aGa~~ 225 (293)
T 3ewb_X 150 AFLIEAVQTAIDAGATVINIPDTVGYT--NPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGM--ATANALAAIENGARR 225 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSSSCC--CHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSC--HHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCCC--CHHHHHHHHHHHHHhcCCccCceEEEEeCCCcCh--HHHHHHHHHHhCCCE
Q ss_pred EE
Q 016581 263 IT 264 (387)
Q Consensus 263 i~ 264 (387)
+.
T Consensus 226 vd 227 (293)
T 3ewb_X 226 VE 227 (293)
T ss_dssp EE
T ss_pred EE
No 172
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=21.21 E-value=4.5e+02 Score=23.63 Aligned_cols=75 Identities=7% Similarity=0.056 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHcCCCEEEecCccc-ccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCchhH---HHHHHcCCCC
Q 016581 186 PIYKEVVSELKAAGASWIQFDEPLL-VMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFNDI---IHSIIDMDAD 261 (387)
Q Consensus 186 ~~~~~~i~~L~~aG~~~IQiDEP~l-~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~~i---~~~l~~l~vD 261 (387)
+++++.++.+.+.|++-|.+---.- ...|..+.+ .+.++.+++.+.. |..++..-+..+. .....++++|
T Consensus 19 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er---~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gad 92 (286)
T 2r91_A 19 ELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEK---MELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAE 92 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHH---HHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHH---HHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCC
Confidence 4677888889999999776653111 111333333 4444444444432 6677664344443 4445678999
Q ss_pred EEEEe
Q 016581 262 VITIE 266 (387)
Q Consensus 262 ~i~lE 266 (387)
++.+=
T Consensus 93 avlv~ 97 (286)
T 2r91_A 93 AVASL 97 (286)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99875
No 173
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=20.52 E-value=2.8e+02 Score=25.54 Aligned_cols=59 Identities=14% Similarity=0.342 Sum_probs=32.0
Q ss_pred HHHHHHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEecCCCch-hHHHHHHcCCCCEEEE
Q 016581 191 VVSELKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMCYSNFN-DIIHSIIDMDADVITI 265 (387)
Q Consensus 191 ~i~~L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C~gn~~-~i~~~l~~l~vD~i~l 265 (387)
++++..++|+++|++|- ...+..+.++ +.++..+.+ ...|+.+ .-+..+.+.++|.|++
T Consensus 220 e~~eA~~aGaD~I~ld~------~~~e~l~~~v-------~~~~~~~~I---~ASGGIt~~~i~~~a~~GvD~isv 279 (296)
T 1qap_A 220 ELDDALKAGADIIMLDN------FNTDQMREAV-------KRVNGQARL---EVSGNVTAETLREFAETGVDFISV 279 (296)
T ss_dssp HHHHHHHTTCSEEEESS------CCHHHHHHHH-------HTTCTTCCE---EECCCSCHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHcCCCEEEECC------CCHHHHHHHH-------HHhCCCCeE---EEECCCCHHHHHHHHHcCCCEEEE
Confidence 44555677899999985 2222221222 222222222 2346653 4566777888998874
No 174
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=20.41 E-value=3.9e+02 Score=25.80 Aligned_cols=90 Identities=13% Similarity=0.183 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCc-----------ccc--cC-CCh---HH-HHH---HHHHHHHHHc-CC
Q 016581 176 SVLSLLPKILPIYKEVVSELKAAGASWIQFDEP-----------LLV--MD-LDS---HK-LQA---FIHSFRITNC-GI 233 (387)
Q Consensus 176 ~~~~l~~~la~~~~~~i~~L~~aG~~~IQiDEP-----------~l~--~~-l~~---~~-~~~---a~~~~~~~~~-~~ 233 (387)
+.+| ++++.+.|.+..+...++|.+-|+|.-- ... .+ ..+ +- .+. ++++++.++. ..
T Consensus 161 t~~e-I~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~ 239 (419)
T 3l5a_A 161 SHEK-INSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEA 239 (419)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHH-HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhc
Confidence 4444 5678888888888889999999999853 211 00 001 11 123 4444444431 12
Q ss_pred CCCceEEEEecCCC------------chhHHHHHHc-CCCCEEEEe
Q 016581 234 QDTTQIHTHMCYSN------------FNDIIHSIID-MDADVITIE 266 (387)
Q Consensus 234 ~~~~~v~lH~C~gn------------~~~i~~~l~~-l~vD~i~lE 266 (387)
+.+..|++=+...+ +..++..|.+ .++|.|++-
T Consensus 240 ~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs 285 (419)
T 3l5a_A 240 PDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIA 285 (419)
T ss_dssp CTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEEC
T ss_pred CCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEe
Confidence 44566777665311 1246777888 999999876
No 175
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=20.30 E-value=2.6e+02 Score=25.26 Aligned_cols=81 Identities=9% Similarity=0.103 Sum_probs=45.7
Q ss_pred CceEEEEecCCCchhHHHHHHcCCC---CEEEEecCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHH
Q 016581 236 TTQIHTHMCYSNFNDIIHSIIDMDA---DVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYE 312 (387)
Q Consensus 236 ~~~v~lH~C~gn~~~i~~~l~~l~v---D~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~ 312 (387)
+..|.+|. +....++++.|.+.+. .++ +-.-..+.+.++.+.+ .+-.++++-+ + ..+.+ ..+
T Consensus 140 ~lPv~iH~-r~a~~~~~~il~~~~~~~~~~i-~H~f~g~~~~~~~~l~---~g~yi~~~g~-~----~~~~~-----~~~ 204 (301)
T 2xio_A 140 KLPMFLHC-RNSHAEFLDITKRNRDRCVGGV-VHSFDGTKEAAAALID---LDLYIGFNGC-S----LKTEA-----NLE 204 (301)
T ss_dssp CCCEEEEE-ESCHHHHHHHHHHTGGGSSCEE-ETTCCCCHHHHHHHHH---TTCEEEECGG-G----SSSHH-----HHH
T ss_pred CCcEEEEe-cCchHHHHHHHHhccCCCCcEE-EEccCCCHHHHHHHHh---cCcEEEEccc-c----cCChH-----HHH
Confidence 45678885 3445667777766542 333 3321224555555443 1334444322 1 12222 237
Q ss_pred HHhhcCCCcEEEcCCCCCC
Q 016581 313 MRTVLETNILWVNPDCGLK 331 (387)
Q Consensus 313 a~~~v~~~~l~isPdCGl~ 331 (387)
+++.+|.+++.+.+||.+.
T Consensus 205 ~~~~~p~drlLleTD~P~~ 223 (301)
T 2xio_A 205 VLKSIPSEKLMIETDAPWC 223 (301)
T ss_dssp HHHTSCGGGEEECCCTTSC
T ss_pred HHHhCChHHEEEecCCCcc
Confidence 7889999999999999874
No 176
>1tx9_A GPD, scaffolding protein D; assembly, conformational switching, structural protein; 3.31A {Enterobacteria phage PHIX174} SCOP: a.84.1.1 PDB: 1al0_1 1cd3_1 1m0f_1
Probab=20.30 E-value=62 Score=25.67 Aligned_cols=23 Identities=30% Similarity=0.544 Sum_probs=19.8
Q ss_pred eccCCCCCCcHHHHHHHHHhhCC
Q 016581 5 IVGYPRMGPKRELKFALESFWDG 27 (387)
Q Consensus 5 ~vG~PR~g~~~eL~~a~e~~~~g 27 (387)
-+||||-+.|-|...|.-.|.-.
T Consensus 64 fvgyprfpapvefiaaviayyvh 86 (151)
T 1tx9_A 64 FVGYPRFPAPVEFIAAVIAYYVH 86 (151)
T ss_dssp HSCCCCCCCBHHHHHHHHHHHSC
T ss_pred cccCCCCCChHHHHHHHHHHhcc
Confidence 47999999999999999888654
No 177
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=20.15 E-value=5.1e+02 Score=23.79 Aligned_cols=117 Identities=9% Similarity=-0.016 Sum_probs=56.7
Q ss_pred HHHcCCCEEEecCcccccCCChHHHHHHHHHHHHHHcCCCCCceEEEEec--CCCch----------hHHHHHHcCCCCE
Q 016581 195 LKAAGASWIQFDEPLLVMDLDSHKLQAFIHSFRITNCGIQDTTQIHTHMC--YSNFN----------DIIHSIIDMDADV 262 (387)
Q Consensus 195 L~~aG~~~IQiDEP~l~~~l~~~~~~~a~~~~~~~~~~~~~~~~v~lH~C--~gn~~----------~i~~~l~~l~vD~ 262 (387)
..++|++.|+|.+-....++.+.. ..+..+.+.. ++.|++-+- .|+|- ..+..+.++++|+
T Consensus 55 A~~gGAdRIELc~~l~~GGlTPS~-----g~i~~a~~~~--~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdG 127 (287)
T 3iwp_A 55 AERGGADRIELCSGLSEGGTTPSM-----GVLQVVKQSV--QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADG 127 (287)
T ss_dssp HHHHTCSEEEECBCGGGTCBCCCH-----HHHHHHHTTC--CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHhCCCEEEECCCCCCCCCCCCH-----HHHHHHHHhc--CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Confidence 356799999999754444454432 1112222222 233333221 13321 3466677899999
Q ss_pred EEEec--CC--CChhhhHHhhhccCCCcccccccccCCC-CCCCCHHHHHHHHHHHHhhcCCCcEEEcCC
Q 016581 263 ITIEN--SR--SNENLLSVFREGVQYDAAIGPGVYDIHS-PRIPSTEEIVDRIYEMRTVLETNILWVNPD 327 (387)
Q Consensus 263 i~lE~--~r--~~~e~L~~~~~~~~~~k~l~lGvvd~~s-~~ve~~e~v~~ri~~a~~~v~~~~l~isPd 327 (387)
+.|=. .. -|.+.++.+-+. .+ .+|+.=.+. ..+.++.+. ++...++ +.++++.|.+
T Consensus 128 vVfG~L~~dg~iD~~~~~~Li~~---a~--~l~vTFHRAFD~~~d~~~A---le~Li~l-GvdrILTSG~ 188 (287)
T 3iwp_A 128 LVFGALTEDGHIDKELCMSLMAI---CR--PLPVTFHRAFDMVHDPMAA---LETLLTL-GFERVLTSGC 188 (287)
T ss_dssp EEECCBCTTSCBCHHHHHHHHHH---HT--TSCEEECGGGGGCSCHHHH---HHHHHHH-TCSEEEECTT
T ss_pred EEEeeeCCCCCcCHHHHHHHHHH---cC--CCcEEEECchhccCCHHHH---HHHHHHc-CCCEEECCCC
Confidence 98862 22 255555554330 11 244443322 224445433 3333333 5677766543
No 178
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=20.10 E-value=1.6e+02 Score=27.67 Aligned_cols=71 Identities=11% Similarity=0.153 Sum_probs=45.9
Q ss_pred EecCCCch-------hHHHHHHcCCCCEEEEecCCCChhhhHHhhhccCCCcccccccccCCCCCCCCHHHHHHHHHHHH
Q 016581 242 HMCYSNFN-------DIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPGVYDIHSPRIPSTEEIVDRIYEMR 314 (387)
Q Consensus 242 H~C~gn~~-------~i~~~l~~l~vD~i~lE~~r~~~e~L~~~~~~~~~~k~l~lGvvd~~s~~ve~~e~v~~ri~~a~ 314 (387)
=+|||... .+...|.+.+++.+-+= ..+.+.|+.++. .+-.|.+||-+.....+.+++....++++.+
T Consensus 4 Gv~yG~~~~nlp~p~~Vv~llks~gi~~VRlY--~~D~~vL~Al~~---sgi~V~lGV~n~~l~~la~~~~A~~WV~~nV 78 (323)
T 3ur8_A 4 GVCYGKIANNLPSDQDVIKLYNANNIKKMRIY--YPHTNVFNALKG---SNIEIILDVPNQDLEALANPSNANGWVQDNI 78 (323)
T ss_dssp EEEECCCSSSCCCHHHHHHHHHHTTCCEEEES--SCCHHHHHHHTT---CCCEEEEEECGGGTGGGGSHHHHHHHHHHHT
T ss_pred eEEcCcCCCCCCCHHHHHHHHHhCCCCeEEec--CCCHHHHHHHHh---cCCeEEEeccccchhhhhhHHHHHHHHHHHH
Confidence 46887432 57777777788877542 225678888876 3678999998754333444666666677665
Q ss_pred hhc
Q 016581 315 TVL 317 (387)
Q Consensus 315 ~~v 317 (387)
...
T Consensus 79 ~~y 81 (323)
T 3ur8_A 79 RNH 81 (323)
T ss_dssp GGG
T ss_pred hhh
Confidence 443
Done!