BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016582
(387 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224092390|ref|XP_002309588.1| predicted protein [Populus trichocarpa]
gi|222855564|gb|EEE93111.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/378 (70%), Positives = 302/378 (79%), Gaps = 6/378 (1%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
MDVPS ELH+E++T+TFPLLMERPEN+N+ HIIDI + +HDR S+GL+++ H
Sbjct: 1 MDVPSTELHSESQTDTFPLLMERPENLNSSAHIIDIPRNIEVPGSPSHDRISSGLEASSH 60
Query: 61 EDGSSGSSRNPTSQPSTSV-NGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQV 119
ED S R P++QPSTS+ NG+N+R+ + RRGE+RRRRSPLNSGLWISVELVLTLSQ+
Sbjct: 61 EDRPSSGVRAPSTQPSTSLSNGTNSRSSSLIRRGEARRRRSPLNSGLWISVELVLTLSQI 120
Query: 120 VSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSA 179
V+++VVLSV RHEHP APLF WIVGYA+GCVATLPLLYWRYR NQ E DS Q+ SA
Sbjct: 121 VASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSLEQDSAQNHQGSA 180
Query: 180 RLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVW 239
+N PA PFS+SV R SE +D R+ S RG QN VL+ R KVLVEYFKMALDCFFAVW
Sbjct: 181 HINVPAGPFSLSVSRNSESDDRRSATTSPRGSQN-AVLNARLKVLVEYFKMALDCFFAVW 239
Query: 240 FVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLR 299
FVVGNVWIFGGHSSA +APNLYRLCIVFL SCIGYAMPFILCATICCCLPCI+S+LG R
Sbjct: 240 FVVGNVWIFGGHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGYR 299
Query: 300 EDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDA 359
EDL QTRGAT ESIDALPTYKFKL K+R N D+S+ DGGVVAAGTEKERVISGEDA
Sbjct: 300 EDLTQTRGATTESIDALPTYKFKLIKNR--NGEDSSAGASDGGVVAAGTEKERVISGEDA 357
Query: 360 VCFCWTAGF--NHEFRYL 375
VC A F N E R L
Sbjct: 358 VCCICLAKFANNDELREL 375
>gi|224143048|ref|XP_002324833.1| predicted protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/380 (69%), Positives = 298/380 (78%), Gaps = 10/380 (2%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
MDV S ELH+E +T+TFPLLMER EN N+ EHIIDI +VS S S H+R S GL+++ H
Sbjct: 1 MDVASTELHSENQTDTFPLLMERQENPNSSEHIIDIR-NEVSVSPS-HNRISTGLEASLH 58
Query: 61 EDGSSGSSRNPTSQPSTSV-NGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQV 119
ED R PTS P TS+ NG+N+R+ + RRGE+RRRRSPLNSGLWISVELVLTLSQ+
Sbjct: 59 EDRPLSGVRAPTSPPPTSLSNGTNSRSSSLIRRGEARRRRSPLNSGLWISVELVLTLSQI 118
Query: 120 VSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSA 179
++++VVLSV R EHPRAPLF WIVGYA+GCVATLPLLYWRY NQ E DS Q+ SA
Sbjct: 119 IASIVVLSVSRKEHPRAPLFAWIVGYASGCVATLPLLYWRYSHRNQALEQDSAQNHQGSA 178
Query: 180 RLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRF--KVLVEYFKMALDCFFA 237
+N PA PFS+SV R SE ED R+ S RGGQN VL+ R+ KVL+EYFKMALDCFFA
Sbjct: 179 HINVPAGPFSLSVSRNSEGEDRRSATTSPRGGQN-AVLNARYELKVLLEYFKMALDCFFA 237
Query: 238 VWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILG 297
VWFVVGNVWIFG HSSA +APNLYRLCIVFL SCIGYAMPFILCATICCCLPCI+SILG
Sbjct: 238 VWFVVGNVWIFGSHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILG 297
Query: 298 LREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGE 357
REDL QTRGAT ESIDALPT+KFKL K+R N D+SS DGG+VAAGTEKERVISGE
Sbjct: 298 FREDLTQTRGATPESIDALPTHKFKLIKNR--NGEDSSSGAADGGIVAAGTEKERVISGE 355
Query: 358 DAVCFCWTAGF--NHEFRYL 375
DAVC A + N E R L
Sbjct: 356 DAVCCICLAKYANNDELREL 375
>gi|255551132|ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein, putative [Ricinus communis]
Length = 437
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/379 (67%), Positives = 301/379 (79%), Gaps = 5/379 (1%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
MDV S E H+E+ T+T PLLME+ ++N+ EHIIDI + SS +++HDRT++GL+++ +
Sbjct: 1 MDVSSTEQHSESLTDTCPLLMEQSNSINSSEHIIDIPRSSDSSPSTSHDRTTSGLEASSN 60
Query: 61 EDGSSGSSRNPT-SQPSTSV-NGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQ 118
ED + S R P+ S ST NGSNTRN + RRGE+RRRRSPLNSGLWISVELVLT+SQ
Sbjct: 61 EDRPTTSVRTPSISHLSTGTSNGSNTRNSSLIRRGEARRRRSPLNSGLWISVELVLTVSQ 120
Query: 119 VVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSS 178
+++++VVLS+ RHEHPRAPLF WIVGYA+GCVATLPLLYWRYR NQV+E ++ Q R SS
Sbjct: 121 IIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQVTEQEAAQPRQSS 180
Query: 179 ARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAV 238
+ P SIS+ R SEV D R+ S RGGQN+G L+ R K LVEYFKMALDCFFAV
Sbjct: 181 -HFSVPGDSISISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEYFKMALDCFFAV 239
Query: 239 WFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGL 298
WFVVGNVWIFGGHSSA +APN+YRLCIVFL SCIGYAMPFILCATICCCLPCI+S+LG
Sbjct: 240 WFVVGNVWIFGGHSSATEAPNMYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISLLGF 299
Query: 299 REDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGED 358
REDL QTRGAT+ESIDALPTYKFKL K R+ +DRD++S GDGGVVAAGTE ER ISGED
Sbjct: 300 REDLGQTRGATSESIDALPTYKFKLNKHRTGDDRDSNSGAGDGGVVAAGTEHERFISGED 359
Query: 359 AVCFCWTAGF--NHEFRYL 375
AVC A + N E R L
Sbjct: 360 AVCCICLAKYANNDELREL 378
>gi|449442204|ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449499624|ref|XP_004160867.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/379 (69%), Positives = 309/379 (81%), Gaps = 4/379 (1%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDIT-ITDVSSSNSTHDRTSNGLDSTR 59
MDVPS EL+ ++E +++PLLM RPE+ N+ EHIIDIT D S H R+SNGL+S++
Sbjct: 1 MDVPSVELNCDSEGDSYPLLMARPEHSNSSEHIIDITGAGDSGPSGLPHGRSSNGLNSSQ 60
Query: 60 HEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQV 119
ED S S+R P SQPSTS GSN+RN +F RRG++RRRRSPLNSGLWIS+EL+LT+SQ+
Sbjct: 61 PEDRPSSSTRVPLSQPSTSSTGSNSRNSSFIRRGDARRRRSPLNSGLWISIELLLTMSQI 120
Query: 120 VSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSA 179
++A++VLS+ ++E PRAPLF WIVGYA+GC ATLPLLYWRYR NQ SE DS+QS SS+
Sbjct: 121 IAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQASEQDSLQSSQSSS 180
Query: 180 RLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVW 239
R+N PA PFS+SV R SE E+ + P S RG Q +GVLS R KVLVEYFKM LDCFFAVW
Sbjct: 181 RINVPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEYFKMGLDCFFAVW 240
Query: 240 FVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLR 299
FVVGNVWIFGGHSSA++APNLYRLCIVFL SCIGYAMPFILC TICCCLPCI+SILG R
Sbjct: 241 FVVGNVWIFGGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILCVTICCCLPCIISILGFR 300
Query: 300 EDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSS-SIGDGGVVAAGTEKERVISGED 358
EDL+QTRGAT+ESI+ALPTYKFKLKKSRS +DR+N+S + GGVVAAGTEKERVISGED
Sbjct: 301 EDLSQTRGATSESINALPTYKFKLKKSRSGDDRENNSGAGEGGGVVAAGTEKERVISGED 360
Query: 359 AVCFCWTAGF--NHEFRYL 375
AVC A + N E R L
Sbjct: 361 AVCCICLAKYANNDELREL 379
>gi|359476391|ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/379 (64%), Positives = 295/379 (77%), Gaps = 4/379 (1%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDIT-ITDVSSSNSTHDRTSNGLDSTR 59
M +PS ELH++++++ +PLLME+P N + EHIIDIT D SSSNS++D S LD +
Sbjct: 1 MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQ 60
Query: 60 HEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQV 119
H+D + S+R P SQPS S + + +F RR ++RRRRSPLNSGLWIS+EL LT+SQ+
Sbjct: 61 HDDRPASSARVPISQPSFSSSNVSNSRNSFRRRADARRRRSPLNSGLWISIELALTVSQI 120
Query: 120 VSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSA 179
+++VVVLS+ RHEHP APLF WIVGYA+GCVATLP+LYWR+R NQ E +S QSR S
Sbjct: 121 IASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQVSF 180
Query: 180 RLNAPAAP-FSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAV 238
N P P FS+SV TSE ED + + + R Q+ LS R KVLVEYFKMALDCFFAV
Sbjct: 181 HSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCFFAV 240
Query: 239 WFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGL 298
WFVVGNVWIFGGHSS+++APNLYRLCIVFL SCIGYAMPFILCATICCCLPCI+SILG
Sbjct: 241 WFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGF 300
Query: 299 REDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGED 358
REDL QTRGAT+ESI+ALPTYKFKLKK+R+ +DR+ +S G+GGVVAAGTE+ERVISGED
Sbjct: 301 REDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGEGGVVAAGTERERVISGED 360
Query: 359 AVCFCWTAGF--NHEFRYL 375
AVC A + N E R L
Sbjct: 361 AVCCICLAKYANNDELREL 379
>gi|296081927|emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/359 (65%), Positives = 278/359 (77%), Gaps = 4/359 (1%)
Query: 21 MERPENVNNCEHIIDIT-ITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSV 79
ME+P N + EHIIDIT D SSSNS++D S LD +H+D + S+R P SQPS S
Sbjct: 1 MEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQHDDRPASSARVPISQPSFSS 60
Query: 80 NGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLF 139
+ + +F RR ++RRRRSPLNSGLWIS+EL LT+SQ++++VVVLS+ RHEHP APLF
Sbjct: 61 SNVSNSRNSFRRRADARRRRSPLNSGLWISIELALTVSQIIASVVVLSLSRHEHPHAPLF 120
Query: 140 EWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAP-FSISVPRTSEV 198
WIVGYA+GCVATLP+LYWR+R NQ E +S QSR S N P P FS+SV TSE
Sbjct: 121 TWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQVSFHSNLPGGPTFSLSVTGTSEE 180
Query: 199 EDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAP 258
ED + + + R Q+ LS R KVLVEYFKMALDCFFAVWFVVGNVWIFGGHSS+++AP
Sbjct: 181 EDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSSSEAP 240
Query: 259 NLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPT 318
NLYRLCIVFL SCIGYAMPFILCATICCCLPCI+SILG REDL QTRGAT+ESI+ALPT
Sbjct: 241 NLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDLTQTRGATSESINALPT 300
Query: 319 YKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFRYL 375
YKFKLKK+R+ +DR+ +S G+GGVVAAGTE+ERVISGEDAVC A + N E R L
Sbjct: 301 YKFKLKKNRNGDDREGNSGAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDELREL 359
>gi|359482955|ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
gi|297743322|emb|CBI36189.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/379 (59%), Positives = 273/379 (72%), Gaps = 34/379 (8%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
M +PS E H+ ++T +PLLMER EN + EHIIDIT D +SS+S+HD ++ +H
Sbjct: 1 MAIPSLEPHSGSQTYKYPLLMERTENHGDREHIIDITRNDDASSSSSHDDHHPVMNPPQH 60
Query: 61 EDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRR--GESRRRRSPLNSGLWISVELVLTLSQ 118
E+ S S++ PT+Q TS N N+RN +F RR G SRRRRSPLNSGLWISVELV+T+SQ
Sbjct: 61 EERPSSSTQTPTNQ--TSSNRLNSRNSSFMRRSDGYSRRRRSPLNSGLWISVELVVTVSQ 118
Query: 119 VVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSS 178
+++++VVLS+ RHE+PRAPLF W+VGYA+GC ATLP+LYWRYR NQ
Sbjct: 119 IIASIVVLSLSRHENPRAPLFAWVVGYASGCFATLPILYWRYRTRNQ------------- 165
Query: 179 ARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAV 238
+ISV + SE A+ R + G+ RF +V++FKMALDCFFAV
Sbjct: 166 ----------TISVNQASETAG-----AATRRSRFVGIFRMRFSGMVDHFKMALDCFFAV 210
Query: 239 WFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGL 298
WFVVGNVWIFGGHSS +DAP LYRLCIVFL SCIGYAMPFILCATICCCLPCI+SILG
Sbjct: 211 WFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGF 270
Query: 299 REDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGED 358
REDL+QTRGA ESIDALPTYKFKLKK+ +D++ +S G+GGV+AAGTEKER ISGED
Sbjct: 271 REDLSQTRGAAPESIDALPTYKFKLKKNGDVDDQEVNSGAGEGGVLAAGTEKERAISGED 330
Query: 359 AVCFCWTAGF--NHEFRYL 375
AVC A + N E R L
Sbjct: 331 AVCCICLAKYADNEELREL 349
>gi|356554344|ref|XP_003545507.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 440
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/381 (57%), Positives = 283/381 (74%), Gaps = 12/381 (3%)
Query: 3 VPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNST--HDRTSNGLDSTRH 60
V S L E + T PLLMER ++N+ +H+I+I + +S++S HDR NG + T+H
Sbjct: 5 VVSLNLCLEGSSGTLPLLMERSGSLNSSQHVIEIAGSADASTSSASHHDRHFNGTNVTQH 64
Query: 61 EDGSSGSSRNPTSQPSTSVNGSNTRNVA----FTRRGESRRRRSPLNSGLWISVELVLTL 116
E+ SG+ R P SQPS S + + + F RRG++RR RSP++SGLWIS+ELVL L
Sbjct: 65 EERISGA-RMPLSQPSVSATSVSNGSNSRNSSFIRRGDTRRNRSPVHSGLWISIELVLLL 123
Query: 117 SQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRN 176
SQ+V++++VLS+ RHEHPR PLF+WI+GYA+GC ATLPLLYWRY N + E +S QSR
Sbjct: 124 SQIVASIIVLSLSRHEHPRTPLFQWIIGYASGCAATLPLLYWRYYHHNHMQEQESSQSRQ 183
Query: 177 SSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFF 236
+S R+N P+ S RT+ ED ++ +AS R Q + +++ R K LVEYFK++LDCFF
Sbjct: 184 TSPRINDPSGTLLFS-SRTNGGEDGQSAVASSRSNQPSLLMNRRMKTLVEYFKISLDCFF 242
Query: 237 AVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSIL 296
AVWFVVGNVWIFGGHSSA +APNLYRLCIVFLA SCIGYAMPFI C+TICCCLPCI+SIL
Sbjct: 243 AVWFVVGNVWIFGGHSSANEAPNLYRLCIVFLAFSCIGYAMPFIFCSTICCCLPCIISIL 302
Query: 297 GLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISG 356
G+RED++Q RGAT+ESI+ALP YKFK+KK++ + + +S+ +GGVVAAGTEKE VISG
Sbjct: 303 GVREDMSQNRGATSESINALPIYKFKMKKNK--RNGNGNSAAAEGGVVAAGTEKEHVISG 360
Query: 357 EDAVCFCWTAGF--NHEFRYL 375
EDAVC A + N E R L
Sbjct: 361 EDAVCCICLAKYENNDELREL 381
>gi|356550569|ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/381 (54%), Positives = 275/381 (72%), Gaps = 6/381 (1%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
MDV S ++ T+T+ PLLME+PE N +H+IDIT + + S + + + T++
Sbjct: 1 MDVTSLGSNSNTQTDQHPLLMEQPETRNGHQHVIDITRNGEALTTSYRNDQHSEMHLTQN 60
Query: 61 EDGSSGSSRNPTSQP-STSVNGSNTRNVAFTRRGES--RRRRSPLNSGLWISVELVLTLS 117
+D +G +++ + Q S+S N+RN A RRG+ R RSPLNSGLWISVELV+T+S
Sbjct: 61 QDQPAGDAQDSSHQTTSSSAPRLNSRNSASLRRGDGYGHRGRSPLNSGLWISVELVVTVS 120
Query: 118 QVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNS 177
Q+++++VVLS+ R+E+P+APLF WIVGY +GCVATLP+LYWR+R NQ +E D+ Q+
Sbjct: 121 QIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRFRNRNQSNEQDTSQASQG 180
Query: 178 SARLNAPAAPF-SISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFF 236
S+ N P + SI V S+ E+ A ++ R G + R LV++FKMALDCFF
Sbjct: 181 SSGSNPPDRSYTSIYVSHVSDEENGHATQSASRNTIMPGAFTSRLNGLVDHFKMALDCFF 240
Query: 237 AVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSIL 296
AVWFVVGNVWIFGGH+S +DAP LYRLCIVFL SCIGYAMPFILCATICCCLPCI+S+L
Sbjct: 241 AVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL 300
Query: 297 GLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISG 356
G+RED +Q RGAT ESI+ALP +KFKLK + + +D+D +S+I +GG++AAGTEKER+ISG
Sbjct: 301 GIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDANSAIDEGGILAAGTEKERMISG 360
Query: 357 EDAVCFCWTAGF--NHEFRYL 375
EDAVC A + + E R L
Sbjct: 361 EDAVCCICLAKYADDDELREL 381
>gi|297802754|ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
gi|297315097|gb|EFH45520.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/370 (61%), Positives = 269/370 (72%), Gaps = 12/370 (3%)
Query: 13 ETETFPLLMER-PEN-VNNCEHII-DITITD-VSSSNSTHDRTSNGLDSTRHEDGSSGSS 68
+ +TF MER PEN ++ EHII DI ++SS+S+HDR SN L+ +HED S+
Sbjct: 15 QADTFSRFMERSPENNLSRNEHIIIDIPRNAAIASSSSSHDRISNVLEPLQHEDDRP-ST 73
Query: 69 RNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSV 128
P S P + +++ + + RRRRSPLNSGLWIS+EL LT+ Q+++A+VVLS+
Sbjct: 74 VPPMSAPQPATATASSSSSMRSNPRSVRRRRSPLNSGLWISIELFLTVGQIIAAIVVLSL 133
Query: 129 FRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPF 188
+HEHPRAPLF WIVGYA GCVATLPLLYWRY SNQ SE DS Q R LN A PF
Sbjct: 134 SKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQASEQDSGQHR---PNLNVAAGPF 190
Query: 189 SISVPRTSEVEDHRAPIASHRGGQNTGVLSP-RFKVLVEYFKMALDCFFAVWFVVGNVWI 247
+ S+ RTSE + + S R + G +S R KV+VEYFKMALDCFFAVWFVVGNVWI
Sbjct: 191 AFSISRTSEGDGRQTNTTSSRVSRYPGFISAARLKVIVEYFKMALDCFFAVWFVVGNVWI 250
Query: 248 FGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRG 307
FGGHSSAA+APNLYRLC+VFL SCIGYAMPFILC TICCCLPCI+SILG REDL Q RG
Sbjct: 251 FGGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICCCLPCIISILGYREDLTQPRG 310
Query: 308 ATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAG 367
AT ESI+ALPT+KFKLKKSRSS D DN SS +GGVVAAGT+ ER ISGEDAVC A
Sbjct: 311 ATPESINALPTHKFKLKKSRSSGD-DNGSSTSEGGVVAAGTDNERAISGEDAVCCICLAK 369
Query: 368 F--NHEFRYL 375
+ N E R L
Sbjct: 370 YANNEELREL 379
>gi|356561942|ref|XP_003549235.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 441
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/381 (58%), Positives = 281/381 (73%), Gaps = 11/381 (2%)
Query: 3 VPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNST--HDRTSNGLDSTRH 60
V S EL E + T PLLM RP ++N +H+I+I + +S++S HDR NG D T+H
Sbjct: 5 VVSLELCLEGSSYTLPLLMARPGSLNGSQHVIEIAGSAYASTSSASHHDRHFNGTDVTQH 64
Query: 61 EDGSSGSSRNPTSQPSTSVNGSNTRNVA----FTRRGESRRRRSPLNSGLWISVELVLTL 116
E+ SG+ P SQPS S + + + F RRG++RR RSP++SGLWIS+ELVL +
Sbjct: 65 EERISGARMPPLSQPSVSATSVSNGSNSRNSSFIRRGDTRRNRSPVHSGLWISIELVLLV 124
Query: 117 SQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRN 176
SQ+V++++VLS+ RHEHPR PLF WI+GYA+GC ATLPLLYWRY N + E DS QSR
Sbjct: 125 SQIVASIIVLSLSRHEHPRTPLFHWIIGYASGCAATLPLLYWRYYHHNHMREQDSSQSRQ 184
Query: 177 SSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFF 236
SS R+N P+ S RT+ ED +A +AS R Q + +++ R K LVEYFK++LDCFF
Sbjct: 185 SSPRINDPSGTLLFS-SRTNSGEDGQAAVASSRSNQASLLMNRRMKTLVEYFKISLDCFF 243
Query: 237 AVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSIL 296
AVWFVVGNVWIFGGHSS +APNLYRLCIVFLA SCIGYAMPFILC+TICCCLPCI+SIL
Sbjct: 244 AVWFVVGNVWIFGGHSSVEEAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCLPCIISIL 303
Query: 297 GLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISG 356
G+RED++Q RGA +ESI+ALP YKFK KK++ + D++S+ +GGVVAAGTEKERVISG
Sbjct: 304 GVREDMSQNRGAASESINALPIYKFKTKKNKRNG--DSNSAAAEGGVVAAGTEKERVISG 361
Query: 357 EDAVCFCWTAGF--NHEFRYL 375
EDAVC A + N E R L
Sbjct: 362 EDAVCCICLAKYENNDELREL 382
>gi|22329099|ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis thaliana]
gi|19698907|gb|AAL91189.1| putative protein [Arabidopsis thaliana]
gi|20465641|gb|AAM20289.1| unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 453
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/370 (61%), Positives = 271/370 (73%), Gaps = 12/370 (3%)
Query: 13 ETETFPLLMER-PEN-VNNCEHII-DITITD-VSSSNSTHDRTSNGLDSTRHEDGSSGSS 68
+ +TF MER PEN ++ EHII DI ++SS+S+HDR SN L+ +HE+ S+
Sbjct: 15 QADTFSRFMERSPENNLSRNEHIIIDIPRNAAIASSSSSHDRISNVLEPLQHEE-ERPST 73
Query: 69 RNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSV 128
+P + P + +++ + + RRRRSPLNSGLWIS+EL LT+ Q+++A+VVLS+
Sbjct: 74 VSPMAAPQPATATASSSSSMRSNPRSVRRRRSPLNSGLWISIELFLTVGQIIAAIVVLSL 133
Query: 129 FRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPF 188
+HEHPRAPLF WIVGYA GCVATLPLLYWRY SNQ SE DS Q R LN A PF
Sbjct: 134 SKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQASEQDSGQHR---PNLNVAAGPF 190
Query: 189 SISVPRTSEVEDHRAPIASHRGGQNTGVLSP-RFKVLVEYFKMALDCFFAVWFVVGNVWI 247
+ S+ RTSE + + S RG + G +S R KV+VEYFKMALDCFFAVWFVVGNVWI
Sbjct: 191 AFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKVIVEYFKMALDCFFAVWFVVGNVWI 250
Query: 248 FGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRG 307
FGGHSSAA+APNLYRLC+VFL SCIGYAMPFILC TICCCLPCI+SILG REDL Q RG
Sbjct: 251 FGGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICCCLPCIISILGYREDLTQPRG 310
Query: 308 ATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAG 367
AT ESI+ALPT+KFKLKKSRS+ D DN SS +GGVVAAGT+ ER ISGEDAVC A
Sbjct: 311 ATPESINALPTHKFKLKKSRSNGD-DNGSSTSEGGVVAAGTDNERAISGEDAVCCICLAK 369
Query: 368 F--NHEFRYL 375
+ N E R L
Sbjct: 370 YANNEELREL 379
>gi|3063710|emb|CAA18601.1| putative protein [Arabidopsis thaliana]
gi|7270164|emb|CAB79977.1| putative protein [Arabidopsis thaliana]
Length = 495
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/370 (61%), Positives = 271/370 (73%), Gaps = 12/370 (3%)
Query: 13 ETETFPLLMER-PEN-VNNCEHII-DITITD-VSSSNSTHDRTSNGLDSTRHEDGSSGSS 68
+ +TF MER PEN ++ EHII DI ++SS+S+HDR SN L+ +HE+ S+
Sbjct: 15 QADTFSRFMERSPENNLSRNEHIIIDIPRNAAIASSSSSHDRISNVLEPLQHEE-ERPST 73
Query: 69 RNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSV 128
+P + P + +++ + + RRRRSPLNSGLWIS+EL LT+ Q+++A+VVLS+
Sbjct: 74 VSPMAAPQPATATASSSSSMRSNPRSVRRRRSPLNSGLWISIELFLTVGQIIAAIVVLSL 133
Query: 129 FRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPF 188
+HEHPRAPLF WIVGYA GCVATLPLLYWRY SNQ SE DS Q R LN A PF
Sbjct: 134 SKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQASEQDSGQHR---PNLNVAAGPF 190
Query: 189 SISVPRTSEVEDHRAPIASHRGGQNTGVLSP-RFKVLVEYFKMALDCFFAVWFVVGNVWI 247
+ S+ RTSE + + S RG + G +S R KV+VEYFKMALDCFFAVWFVVGNVWI
Sbjct: 191 AFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKVIVEYFKMALDCFFAVWFVVGNVWI 250
Query: 248 FGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRG 307
FGGHSSAA+APNLYRLC+VFL SCIGYAMPFILC TICCCLPCI+SILG REDL Q RG
Sbjct: 251 FGGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICCCLPCIISILGYREDLTQPRG 310
Query: 308 ATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAG 367
AT ESI+ALPT+KFKLKKSRS+ D DN SS +GGVVAAGT+ ER ISGEDAVC A
Sbjct: 311 ATPESINALPTHKFKLKKSRSNGD-DNGSSTSEGGVVAAGTDNERAISGEDAVCCICLAK 369
Query: 368 F--NHEFRYL 375
+ N E R L
Sbjct: 370 YANNEELREL 379
>gi|356555922|ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/381 (54%), Positives = 276/381 (72%), Gaps = 6/381 (1%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
MDV S ++ T+T+ PLLME+PE N +H+IDIT + + S+ + + + ++
Sbjct: 1 MDVTSLGSNSNTQTDQHPLLMEQPETHNGHQHVIDITRNGEALTTSSRNDQYSEMHLPQN 60
Query: 61 EDGSSGSSRNPTSQPSTSVNGS-NTRNVAFTRRGES--RRRRSPLNSGLWISVELVLTLS 117
ED ++G ++N + Q S+S N+RN A RRGE RSPLNSGLWISVELV+T+S
Sbjct: 61 EDQAAGDAQNSSHQTSSSSAPRLNSRNSASLRRGEGYGHHGRSPLNSGLWISVELVVTVS 120
Query: 118 QVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNS 177
Q+++++VVLS+ R+E+P+APLF WIVGYA+GCVATLP+LYWR+R NQ +E D+ Q+
Sbjct: 121 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRNQSNEQDTSQASQG 180
Query: 178 SARLNAPAAPF-SISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFF 236
S+ N P + SI V S+ E+ A ++ R G + R LV++FKMALDCFF
Sbjct: 181 SSGSNPPDRSYNSIHVSHVSDEENGHATRSASRNTIMPGAFTSRLNGLVDHFKMALDCFF 240
Query: 237 AVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSIL 296
AVWFVVGNVWIFGGH+S +DAP LYRLCIVFL SCIGYAMPFILCATICCCLPCI+S+L
Sbjct: 241 AVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL 300
Query: 297 GLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISG 356
G+RED +Q RGAT ESI+ALP +KFKLK + + +D+D +++I +GG++AAGTEKER+ISG
Sbjct: 301 GIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDVNAAIDEGGILAAGTEKERMISG 360
Query: 357 EDAVCFCWTAGF--NHEFRYL 375
EDAVC A + + E R L
Sbjct: 361 EDAVCCICLAKYADDDELREL 381
>gi|357436799|ref|XP_003588675.1| RING finger protein [Medicago truncatula]
gi|355477723|gb|AES58926.1| RING finger protein [Medicago truncatula]
Length = 403
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/362 (58%), Positives = 277/362 (76%), Gaps = 12/362 (3%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNST-HDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSV 79
MERP +VN+ +HII+I + +S++++ DR NG+D + H + G+ R Q S S
Sbjct: 1 MERPGSVNDGQHIIEIAGSAEASTSASSRDRQFNGVDVS-HREERVGAVRLTVGQNSVST 59
Query: 80 NG----SNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPR 135
G SN RN + RRG++RR RSP++SGLWIS+ELVL +SQ+V+++VVLS+ R+EHP+
Sbjct: 60 LGISTESNRRNSSSVRRGDARRSRSPVHSGLWISIELVLLVSQIVASIVVLSLSRNEHPQ 119
Query: 136 APLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRT 195
PLF+WIVGYA+GCVATLPLL+WRY N + E DS QSR +S R++ P+ F +S+ R
Sbjct: 120 TPLFQWIVGYASGCVATLPLLFWRYYNHNHLREQDSAQSRQTSPRISDPSGTF-LSISRN 178
Query: 196 SEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAA 255
+ + +A AS R Q + +++ R K+LVEYFK++LDCFFAVWFVVGNVWIFGG SSAA
Sbjct: 179 NG-DAGQAAAASSRSNQTSILMNRRMKILVEYFKISLDCFFAVWFVVGNVWIFGGRSSAA 237
Query: 256 DAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDA 315
APNLYRLCIVFLA SCIGYAMPFILC+TICCCLPCI+SILG+REDL+Q RGAT+ESI+A
Sbjct: 238 VAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCLPCIISILGVREDLSQNRGATSESINA 297
Query: 316 LPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFR 373
LPTYKFK+KK++ +++ ++++ DGG VAAGTEKERVISGEDAVC A + N E R
Sbjct: 298 LPTYKFKMKKNKKNSENNSANI--DGGTVAAGTEKERVISGEDAVCCICLAKYENNDELR 355
Query: 374 YL 375
L
Sbjct: 356 EL 357
>gi|255552959|ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein, putative [Ricinus communis]
Length = 421
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/365 (56%), Positives = 268/365 (73%), Gaps = 8/365 (2%)
Query: 1 MDVPSAELHTE--TETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDST 58
MD S E ++ T+ + +PLLMER ++ ++ EHII IT + SSNS+H+ +D
Sbjct: 1 MDTTSFEPNSTIPTQIDQYPLLMERMDSHDDHEHIISITGNEDGSSNSSHNGQPPDIDLP 60
Query: 59 RHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQ 118
HED SS + ++ +S + + ++T A G RRRRSP NSGLWIS+EL +T+ Q
Sbjct: 61 YHEDRSSSAHQSSSSSLNRLNSRNST--FARRGDGYDRRRRSPFNSGLWISIELFVTVGQ 118
Query: 119 VVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSS 178
+++++VVLS+ R+E+P+APLF W+VGYA+GCVATLP+LYWR+R NQ + DS QS S
Sbjct: 119 IIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRNQSGQQDSHQSHQGS 178
Query: 179 ARLNAP--AAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFF 236
++ N P ++ +ISV + SE ++ R+ +A GQ LS R L+++FKMALDCFF
Sbjct: 179 SQNNPPDTSSYTAISVTQASEEDNFRSELAI-ANGQTGRPLSSRLNGLMDHFKMALDCFF 237
Query: 237 AVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSIL 296
AVWFVVGNVWIFGGHS+ DAP LY+LCIVFL SCIGYAMPFILCATICCCLPCI+S+L
Sbjct: 238 AVWFVVGNVWIFGGHSTPTDAPKLYKLCIVFLTFSCIGYAMPFILCATICCCLPCIISLL 297
Query: 297 GLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISG 356
G RED +QTRGAT ESI++LP YKFKL+KS S ND DNS + G+GGV+A GTEKER ISG
Sbjct: 298 GFREDFSQTRGATTESINSLPIYKFKLQKSESVNDHDNSGT-GEGGVLAEGTEKERAISG 356
Query: 357 EDAVC 361
EDA+C
Sbjct: 357 EDAIC 361
>gi|356507782|ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 385
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 201/361 (55%), Positives = 250/361 (69%), Gaps = 41/361 (11%)
Query: 21 MERPENVNNCEHIIDIT---ITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPST 77
M RP + H+IDIT SSS++ HDR +N +D
Sbjct: 1 MARPTH-----HVIDITGSSRPSTSSSSTPHDRLANDVD--------------------- 34
Query: 78 SVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAP 137
N+R SR+ RSPLNSGLWI VELV+T+SQ+V++VVVLS+ +HEHP AP
Sbjct: 35 -FGALNSRTRRRGDTTRSRQHRSPLNSGLWICVELVITVSQIVASVVVLSLSKHEHPHAP 93
Query: 138 LFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSE 197
L WIVGYA+GCVATLPLLYWRY + V E +S Q +S R N P+ +S T+
Sbjct: 94 LIAWIVGYASGCVATLPLLYWRYYHNRGVREQESSQ---ASPRSNDPSGTL-LSDSTTNG 149
Query: 198 VEDHRAPIASH-RGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAD 256
ED AP +S R Q + +++ R K+LVEYFK+A+DCFFA+WFVVGNVWIFGGHSSA
Sbjct: 150 GED--APASSRTRSNQESWLMNARLKLLVEYFKIAVDCFFAIWFVVGNVWIFGGHSSADQ 207
Query: 257 APNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDAL 316
APNLYRLC+VFL SCIGYAMPFILCATICCCLPCI+SILG+RED+AQTRGA++ESI+AL
Sbjct: 208 APNLYRLCVVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDMAQTRGASSESINAL 267
Query: 317 PTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFRY 374
PTYKFK+K+++S + + S++G+GGVVAAGTEKER+ISGEDA C A + N E R
Sbjct: 268 PTYKFKMKRNKSKGESN--SAVGEGGVVAAGTEKERMISGEDAACCICLAKYENNDELRE 325
Query: 375 L 375
L
Sbjct: 326 L 326
>gi|125541404|gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 184/360 (51%), Positives = 235/360 (65%), Gaps = 20/360 (5%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVN 80
ME+ V+ EHIIDI S++++H D S+ + P Q ++V
Sbjct: 1 MEQTTGVSGHEHIIDIPRDSGPSTSTSHSVARENHGEPNPVDRSATRALVPALQAPSAVG 60
Query: 81 GSNTRNVAFTRRGES--RRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPL 138
+ + + RR ++ RR RSPLNSGLWIS+E+++ +SQ+V+A+VVLS+ R EHP+APL
Sbjct: 61 APSAGHTSGARRSDNYVRRHRSPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPL 120
Query: 139 FEWIVGYAAGCVATLPLLYWRYRQSNQVS-EPDSVQSRNSSARLNAPAAPFSISVPRTSE 197
FEW++GY GC ATLP LYWRY N V+ E + + S++ N+ + P S
Sbjct: 121 FEWVIGYTVGCFATLPHLYWRYIHRNIVNGENEPAHTLQGSSQNNS-------TEPSASA 173
Query: 198 VEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADA 257
E R +N + +PR L ++FKMALDCFFAVWFVVGNVWIFGG SSAADA
Sbjct: 174 SERRR------NAARNAVLANPRINALFDHFKMALDCFFAVWFVVGNVWIFGGRSSAADA 227
Query: 258 PNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALP 317
PNLYRLCIVFL SCIGYAMPFILCA ICCCLPCI+S++G RED TRGAT+ESI++LP
Sbjct: 228 PNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISVMGFREDTNNTRGATSESINSLP 287
Query: 318 TYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGFNH--EFRYL 375
TYKFK KK R S+ N + DGG+VAAGT+KER +S EDAVC A + H E R L
Sbjct: 288 TYKFKTKKRRHSS--GNEAEGQDGGIVAAGTDKERSLSAEDAVCCICLAKYAHNDELREL 345
>gi|15220126|ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis
thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis thaliana]
gi|332198277|gb|AEE36398.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 346 bits (888), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 258/382 (67%), Gaps = 18/382 (4%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
MDV S +T T T+ PLLM+ N EHI+DIT D S+S H
Sbjct: 1 MDVSSIVRNT-TLTDQDPLLMDH----GNREHIVDITSNDEEDSSSRSSLDELTPQGNSH 55
Query: 61 E-DGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGES---RRRRSPLNSGLWISVELVLTL 116
+ + + SS N T Q T + R + +RRG++ RR RSPLNSGLWISVELV+T+
Sbjct: 56 QGEETVLSSSNATQQHPTHPSPPQQRPTS-SRRGDNGNGRRTRSPLNSGLWISVELVVTV 114
Query: 117 SQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRN 176
+Q+V+A+VV+ + + EHP APLF W++GY GC+ATLP+LYWR+R N+ + DS Q R
Sbjct: 115 AQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCLATLPILYWRFRTYNRATGQDSSQ-RA 173
Query: 177 SSARLNAPAAPFS-ISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCF 235
+S++ N+ + P++ +SV + ++ E+ A+ R Q L R LV++FKMA+DCF
Sbjct: 174 TSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRNNQVGESLRTRLNGLVDHFKMAIDCF 233
Query: 236 FAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSI 295
FAVWFVVGNVWIFGGHSS +D+P LYRLCI FL SCIGYAMPFILCATICCCLPC++S+
Sbjct: 234 FAVWFVVGNVWIFGGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCCLPCLISV 293
Query: 296 LGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVIS 355
LG RE+ +QTRGATAE+I+ALP Y+F KS+S ND + S G+GG + G++K+R+IS
Sbjct: 294 LGFRENFSQTRGATAEAINALPVYRF---KSKSRNDLEFSEE-GEGGFLLLGSQKKRLIS 349
Query: 356 GEDA-VCFCWTA-GFNHEFRYL 375
GEDA C C T G + + R L
Sbjct: 350 GEDASCCICLTRYGDDEQVREL 371
>gi|356518268|ref|XP_003527801.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 386
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/361 (55%), Positives = 259/361 (71%), Gaps = 38/361 (10%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNST---HDRTSNGLDSTRHEDGSSGSSRNPTSQPST 77
M RP + H+IDIT + S++S+ HDR +N +D G+ + TS+
Sbjct: 1 MARPTH-----HVIDITGSSGPSTSSSSTPHDRLANDVD--------FGALNSRTSRR-- 45
Query: 78 SVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAP 137
G TR+ SR+ RSPLNSGLWI VELV+T+SQ+V++VVVLS+ +HEHPRAP
Sbjct: 46 --RGDTTRS--------SRQHRSPLNSGLWICVELVITVSQIVASVVVLSLSKHEHPRAP 95
Query: 138 LFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSE 197
LF WIVG+A+GCVATLPLLYWRY + V E +S S +S R N P+ +S T+
Sbjct: 96 LFAWIVGFASGCVATLPLLYWRYYHNCLVRELES--SSQASLRSNDPSGTL-LSDSTTNG 152
Query: 198 VEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADA 257
ED P AS R Q + +++ R K+LVEYFK+A+DCFFA+WF+VGNVWIFGGHSSA A
Sbjct: 153 GED--VP-ASSRSNQESWLMNARLKLLVEYFKIAVDCFFAIWFIVGNVWIFGGHSSADQA 209
Query: 258 PNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALP 317
PNLYRLC+VFL SCIGYAMPFILCATICCCLPCI+SILG+RED+AQT GA++ESI++LP
Sbjct: 210 PNLYRLCVVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDMAQTPGASSESINSLP 269
Query: 318 TYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFRYL 375
TYKFK+KK++S +++S++ +GGVVA+GTEKER+ISGEDA C A + N E R L
Sbjct: 270 TYKFKMKKNKSKG--ESNSAVSEGGVVASGTEKERMISGEDAACCICLAKYENNDELREL 327
Query: 376 V 376
+
Sbjct: 328 L 328
>gi|115462405|ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|215701280|dbj|BAG92704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 201/388 (51%), Positives = 238/388 (61%), Gaps = 51/388 (13%)
Query: 1 MDVPSAELHTETE-TETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDS-T 58
M VP E T +E T+ FPLL + EN + H +DI D S S S D NG D
Sbjct: 1 MAVPPVESETRSEETDNFPLLADHMENTGHHAHAVDIPW-DSSPSTSRRD-NHNGFDQLP 58
Query: 59 RHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRR--SPLNSGLWISVELVLTL 116
R +GS G TS PS S NG RR ++R RR SPLNSG WISVELV+ +
Sbjct: 59 RILEGSPG-----TSTPSNSQNG------PLARRDDNRGRRQPSPLNSGCWISVELVVNV 107
Query: 117 SQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRN 176
SQ+++A+ VLSV R+EHP +PLFEW++GY GC ATLP LYWRY N P + Q
Sbjct: 108 SQIIAAICVLSVSRNEHPHSPLFEWVIGYTVGCTATLPHLYWRYLHRNL---PTTGQE-- 162
Query: 177 SSARLNAPAAPFSISVPRTSEVEDHRAPIASHRG--GQNTGVLSPRFKVLVEYFKMALDC 234
P ++P + E + + G N ++PRF+ ++FKMALDC
Sbjct: 163 ----------PTVQNIPPNNTPEANSYGVTGTNGVSRNNEATVNPRFQAFADHFKMALDC 212
Query: 235 FFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVS 294
FFAVWFVVGNVW+FGGHSSA DAPNLYRLCI FL SCIGYAMPFILCA ICCCLPCI+S
Sbjct: 213 FFAVWFVVGNVWVFGGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIIS 272
Query: 295 ILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDG-----GVVAAGTE 349
ILG REDL Q RGA+AE+I+AL T KFK KK+R GDG GVVAAGT
Sbjct: 273 ILGFREDLNQNRGASAETINALGTCKFKSKKTRD----------GDGNEVGVGVVAAGTN 322
Query: 350 KERVISGEDAVCFCWTAGF--NHEFRYL 375
KERVIS EDAVC A + N + R L
Sbjct: 323 KERVISAEDAVCCICLARYVDNDDLREL 350
>gi|357134414|ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/386 (48%), Positives = 243/386 (62%), Gaps = 35/386 (9%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
M P E T + T+ PLLM+ EN ++ E ID D +SS+++ ++GLD
Sbjct: 1 MAAPPVESETGSPTDNHPLLMDHLENTSHREIAIDSPRDDDASSSTSSRDNNSGLDRLPR 60
Query: 61 EDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRR--SPLNSGLWISVELVLTLSQ 118
+ + P SN++N RRG++R RR SPLNS WISVEL++T+SQ
Sbjct: 61 NSENLQETTTP----------SNSQNAPLARRGDNRVRRQQSPLNSSCWISVELIVTVSQ 110
Query: 119 VVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSS 178
+++A+ VLS+ R+EHP APLFEW++GY GC+ATLPLLYWRY N+++ S+N
Sbjct: 111 IIAAISVLSLSRNEHPHAPLFEWVIGYTVGCIATLPLLYWRYIHRNRLTTGQESASQNFP 170
Query: 179 ARLNAPAAPFS-ISVPRTSEVEDHRAPIASHRGG------QNTGVLSPRFKVLVEYFKMA 231
A F+ S R SE A H G NT +PR + ++F+MA
Sbjct: 171 PNSIPEANSFTESSASRISE--------AGHVTGTNGVSQNNTITRNPRVQAYADHFRMA 222
Query: 232 LDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPC 291
LDCFFAVWFVVGNVWIFGGHSS+ DAPNLYRLCI FL SCIGYAMPFILCA ICCCLPC
Sbjct: 223 LDCFFAVWFVVGNVWIFGGHSSSHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPC 282
Query: 292 IVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
I+S++ REDL Q +GATAE+I+AL TYKFKLKK+R N GG++AAGT+KE
Sbjct: 283 IISLMSFREDLNQNKGATAEAINALRTYKFKLKKAR------NGEGSEGGGILAAGTDKE 336
Query: 352 RVISGEDAVCFCWTAGF--NHEFRYL 375
R++S EDAVC A + N + R L
Sbjct: 337 RIVSAEDAVCCICLARYVNNDDLREL 362
>gi|357113469|ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/311 (55%), Positives = 211/311 (67%), Gaps = 22/311 (7%)
Query: 74 QPSTSVNGSNTRNVAFTRRGES--RRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRH 131
QP +V + N + RRG++ RR RSPLNSGLWIS+E+++ +SQ+V+A+VVLS+ R
Sbjct: 59 QPPAAVGPPHAGNTSGARRGDNYGRRHRSPLNSGLWISIEVIVNVSQIVAAIVVLSLSRK 118
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS-EPDSVQSRNSSARLNAPAAPFSI 190
EHP+APLFEW++GY GC ATLP LYWRY N V+ E + S S
Sbjct: 119 EHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVNGENEQAHSLQGS------------ 166
Query: 191 SVPRTSEVEDHRAPIASHR---GGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI 247
S + + E A AS R +N + +PR L ++FKMALDCFFAVWFVVGNVWI
Sbjct: 167 SQSQNNSTEPTHAASASERRRTAARNAVLANPRINALFDHFKMALDCFFAVWFVVGNVWI 226
Query: 248 FGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRG 307
FGG SSAADAPNLYRLCIVFL SCIGYAMPFILCA ICCCLPCI+S++G RED TRG
Sbjct: 227 FGGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISVMGFREDTNNTRG 286
Query: 308 ATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAG 367
AT+ESI++LPTYKFK KK R + D DGG++AAGT+KER +S EDAVC A
Sbjct: 287 ATSESINSLPTYKFKTKKRRHGSGNDAEGQ--DGGILAAGTDKERSLSAEDAVCCICLAK 344
Query: 368 FNH--EFRYLV 376
+ H E R L
Sbjct: 345 YAHNDELRELA 355
>gi|225445348|ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 197/368 (53%), Positives = 248/368 (67%), Gaps = 9/368 (2%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGL-DSTR 59
M V S E E++T+ +PLLMERPEN N EHI+DI +SS+S+ D S + + T
Sbjct: 1 MAVSSQEPSCESQTDRYPLLMERPENYENHEHIVDIVSASDASSSSSSDEDSAHVSNPTH 60
Query: 60 HEDGSSGSSRNP-TSQPSTSVNGSNTRNVAFTRR--GESRRRRSPLNSGLWISVELVLTL 116
HE+ + P + +S + S +RN + R G RRR SP NSGLWIS+E+V T
Sbjct: 61 HENRPLTDAWVPISQSSPSSSDVSESRNSSIITRAHGPGRRRWSPFNSGLWISIEIVFTT 120
Query: 117 SQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPD---SVQ 173
S +V+++VVLS+ R E P+ PLF W+VGYAAGC A+LP+L+WRY + N E +Q
Sbjct: 121 SLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRNHDGEQGLNHMLQ 180
Query: 174 SRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALD 233
+ + + +IS+ R++ E+ + G G + R VL +Y+KMALD
Sbjct: 181 GSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNARLSVLADYYKMALD 240
Query: 234 CFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIV 293
CFFAVWFVVGNVWIFGGHSS APNLYRLCIVFL SCIGYAMPFILCA ICCCLPCI+
Sbjct: 241 CFFAVWFVVGNVWIFGGHSSFTAAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCII 300
Query: 294 SILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERV 353
SILG DL+Q RGA+AESI+ALPTYKFKLKK+ S N + SS + +GGVV AGTEKER
Sbjct: 301 SILG-HGDLSQVRGASAESINALPTYKFKLKKNGSGNSGEISSGV-EGGVVGAGTEKERA 358
Query: 354 ISGEDAVC 361
ISGEDAVC
Sbjct: 359 ISGEDAVC 366
>gi|293333937|ref|NP_001169753.1| uncharacterized protein LOC100383634 [Zea mays]
gi|223975755|gb|ACN32065.1| unknown [Zea mays]
gi|224031459|gb|ACN34805.1| unknown [Zea mays]
gi|413939252|gb|AFW73803.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/364 (50%), Positives = 231/364 (63%), Gaps = 25/364 (6%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVN 80
ME+ V+ EHIIDI ++ + + + D S + P Q +++
Sbjct: 1 MEQATGVSGPEHIIDIPREIGPPASVSRSAGRENHEESNPVDRPSTRALVPALQAPSAIG 60
Query: 81 GSN-TRNVAFTRRGES--RRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAP 137
T + + TRR ++ RR RSPLNSGLWIS+E+++ SQ+V+A+VVL V R EHP+AP
Sbjct: 61 AVPITGHTSGTRRNDNYVRRHRSPLNSGLWISIEVIVNFSQIVAAIVVLCVSRKEHPQAP 120
Query: 138 LFEWIVGYAAGCVATLPLLYWRYRQSNQVS-EPDSVQSRNSSARLNAPAAPFSISVPRTS 196
L EW++GY GC ATLP LYWRY N V+ E +S + SA N+ A + S
Sbjct: 121 LLEWVIGYTVGCFATLPHLYWRYIHRNIVNGEHESSHTPQGSAHNNSNEATHAAS----- 175
Query: 197 EVEDHRAPIASHR---GGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSS 253
AS R +N + +PR L ++FKMALDCFFAVWFVVGNVWIFGG SS
Sbjct: 176 ---------ASERRRNAARNAVLANPRINALFDHFKMALDCFFAVWFVVGNVWIFGGRSS 226
Query: 254 AADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESI 313
AADAPNLYRLCIVFL SCIGYAMPFILCA ICCCLPCI+SI+G RED TRGA++ESI
Sbjct: 227 AADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISIMGFREDTNNTRGASSESI 286
Query: 314 DALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGFNH--E 371
+ALPTYKFK+KK R + + +GG++AAGT+KER +S EDAVC A + H E
Sbjct: 287 NALPTYKFKIKKRRHGSGSETEGQ--EGGILAAGTDKERSLSAEDAVCCICLAKYAHNDE 344
Query: 372 FRYL 375
R L
Sbjct: 345 LREL 348
>gi|357136383|ref|XP_003569784.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 409
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 227/359 (63%), Gaps = 12/359 (3%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVN 80
M+ P NV +H ID+ D++ +++H N LD G S S P + S+S
Sbjct: 1 MDHPGNVTPRDHAIDMPRNDLTLPSTSHPDNHNDLDELNRIRGPS-SEVPPVPESSSSTT 59
Query: 81 GS-NTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLF 139
G+ N R+ +FTRR + R+++PLNSGLWIS+EL++ +SQ+++A+ VLSV R+EHPRAPLF
Sbjct: 60 GTLNFRSASFTRRDQGNRQQNPLNSGLWISIELIVNVSQIIAAIAVLSVSRNEHPRAPLF 119
Query: 140 EWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFS-ISVPRTSEV 198
EW+VGY GCVAT+P LYWRY N + ++ SS R + + F+ IS R SEV
Sbjct: 120 EWVVGYIIGCVATIPHLYWRYLHRNCQNIEQEPTTQGSSQRNISESDSFAPISSARASEV 179
Query: 199 EDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAP 258
+ R N + SPR L+ K+ALDCFFAVWFVVGNVWIFGG SS DAP
Sbjct: 180 GNEDNSTGVSR--NNFPIASPRVYALIACLKLALDCFFAVWFVVGNVWIFGGRSSVHDAP 237
Query: 259 NLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPT 318
NLYRLCIVFL IGYA+PFILC ICCCLPCI+S++G EDL +GAT E IDAL
Sbjct: 238 NLYRLCIVFLTFGFIGYALPFILCTMICCCLPCIISMVGFHEDLDLNKGATTEVIDALVA 297
Query: 319 YKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFRYL 375
YK+K S RD +GGV+ AGT+KER IS EDAVC + F N + R L
Sbjct: 298 YKYK-----SMRIRDGDVGEDNGGVLGAGTDKERTISAEDAVCCICLSKFSNNEDLREL 351
>gi|115449125|ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial [Oryza sativa Japonica Group]
Length = 342
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 166/283 (58%), Positives = 202/283 (71%), Gaps = 18/283 (6%)
Query: 96 RRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPL 155
RR RSPLNSGLWIS+E+++ +SQ+V+A+VVLS+ R EHP+APLFEW++GY GC ATLP
Sbjct: 22 RRHRSPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPH 81
Query: 156 LYWRYRQSNQVS-EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNT 214
LYWRY N V+ E + + S++ N+ + P S E R +N
Sbjct: 82 LYWRYIHRNIVNGENEPAHTLQGSSQNNS-------TEPSASASERRR------NAARNA 128
Query: 215 GVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIG 274
+ +PR L ++FKMALDCFFAVWFVVGNVWIFGG SSAADAPNLYRLCIVFL SCIG
Sbjct: 129 VLANPRINALFDHFKMALDCFFAVWFVVGNVWIFGGRSSAADAPNLYRLCIVFLTFSCIG 188
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDN 334
YAMPFILCA ICCCLPCI+S++G RED TRGAT+ESI++LPTYKFK KK R S+ N
Sbjct: 189 YAMPFILCAMICCCLPCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHSS--GN 246
Query: 335 SSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGFNH--EFRYL 375
+ DGG+VAAGT+KER +S EDAVC A + H E R L
Sbjct: 247 EAEGQDGGIVAAGTDKERSLSAEDAVCCICLAKYAHNDELREL 289
>gi|297842825|ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/372 (48%), Positives = 250/372 (67%), Gaps = 25/372 (6%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTS--NGLDST 58
MDV S + + T+ PLLM+ + NN +HI+DIT+++ S+S + T G + T
Sbjct: 1 MDVSS--IARTSLTDQHPLLMDHHTH-NNRDHIVDITMSNGQDSSSIDELTPPHQGEEET 57
Query: 59 RHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQ 118
+ P +P++S N T + RSPLNSGLWISVELV+T++Q
Sbjct: 58 VSSSTLTAHPAPPQQRPTSSRNARRTTST-----------RSPLNSGLWISVELVVTVAQ 106
Query: 119 VVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSS 178
+V+A+VV+ + + EHP APLF W++GY +GC+ATLP+LYWR+R ++ + DS Q +SS
Sbjct: 107 IVAAIVVMVLAKDEHPEAPLFTWVIGYTSGCIATLPILYWRFRTYSRGTGQDSSQRLSSS 166
Query: 179 ARLN---APAAPFS-ISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDC 234
++ N + + P++ +SV + ++ E+ A+ R Q L R LV++FKMA+DC
Sbjct: 167 SQANNNPSESTPYTAVSVAQAADEENSTDMSAAPRNNQVGETLRTRLNGLVDHFKMAIDC 226
Query: 235 FFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVS 294
FFAVWFVVGNVWIFGGHSS +D+P LYRLCI FL SCIGYAMPFILCATICCCLPC++S
Sbjct: 227 FFAVWFVVGNVWIFGGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCCLPCLIS 286
Query: 295 ILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVI 354
+LG RE+ +QTRGAT E+I+ALP Y+F KS+S ND + S G+GG + G++K+R+I
Sbjct: 287 VLGFRENFSQTRGATTEAINALPVYRF---KSKSRNDLEFSEE-GEGGFLLLGSQKKRLI 342
Query: 355 SGEDA-VCFCWT 365
SGEDA C C T
Sbjct: 343 SGEDASCCICLT 354
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 183/384 (47%), Positives = 244/384 (63%), Gaps = 34/384 (8%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDI--TITDVSSSNSTHDRTSNGLDST 58
M + S + ET T+ +PLLMER +N N EH+I+I SS +S + G+
Sbjct: 1 MAISSDKPMHETHTDQYPLLMERHDNHINVEHVINIDRGGEASSSESSGLEFPHGGIHIH 60
Query: 59 RHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGES--RRRRSPLNSGLWISVELVLTL 116
H + ++GS P ++S + NTR + R ES RR SP NSG WIS+EL TL
Sbjct: 61 SHRE-TNGSQTPPNGSSASSPSQGNTR----SPRSESMGRRNLSPFNSGFWISIELAFTL 115
Query: 117 SQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRN 176
+Q++++ +VL + RHEHP+APLF W+VGY AGCVA+LP++YWR+ N+ SE VQ
Sbjct: 116 TQIIASTIVLCLSRHEHPQAPLFAWVVGYTAGCVASLPVMYWRFIHRNRGSEA-VVQVNQ 174
Query: 177 SSARLNAPA---APFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALD 233
+S N+ + + +IS+ R+ E ED ++ +S G R +++++FK ALD
Sbjct: 175 ASPHANSASDQNSYVTISLSRSLEHEDRQSVPSSSNEGLTANT---RMGLIMDHFKTALD 231
Query: 234 CFFAVWFVVGNVWIFGGHSSAADAPNLYR----------------LCIVFLAISCIGYAM 277
CFF V FVVGNVWIFGGH+S +DAPNLYR LCIV+L +SCI YAM
Sbjct: 232 CFFGVLFVVGNVWIFGGHASVSDAPNLYRYFLNPDVKTLQISFESLCIVYLTLSCINYAM 291
Query: 278 PFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSS 337
PFILCA ICCCLPCI+S+LG+REDL Q RGA+ ESI+ LPTYKFK+ + +S
Sbjct: 292 PFILCAMICCCLPCIISVLGIREDLNQVRGASEESINTLPTYKFKVTNDENGCTGQRNSE 351
Query: 338 IGDGGVVAAGTEKERVISGEDAVC 361
+GG+VA GTEKERVISGEDAVC
Sbjct: 352 --EGGIVAIGTEKERVISGEDAVC 373
>gi|115434872|ref|NP_001042194.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|55296113|dbj|BAD67832.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|55296253|dbj|BAD67994.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|113531725|dbj|BAF04108.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|215736990|dbj|BAG95919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187619|gb|EEC70046.1| hypothetical protein OsI_00636 [Oryza sativa Indica Group]
gi|222617849|gb|EEE53981.1| hypothetical protein OsJ_00605 [Oryza sativa Japonica Group]
Length = 405
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 225/361 (62%), Gaps = 20/361 (5%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVN 80
M N ++ +H IDI D + +++H N LD G + +++
Sbjct: 1 MGDSGNASHRDHTIDILRNDATFPSTSHQDNHNNLDELHQTRGPLNDVPHVPESSASATP 60
Query: 81 GSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFE 140
S +RN +F RR + R+ +PLNSG WIS+EL+++LSQ+++A+ VLSV R+EHP APL +
Sbjct: 61 ASISRNASFARRDQGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQ 120
Query: 141 WIVGYAAGCVATLPLLYWRYRQSN-QVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVE 199
W++GY GCVATLP LYWR+ N Q +E +S +S + P + +S SEV
Sbjct: 121 WLIGYTIGCVATLPHLYWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVV 180
Query: 200 DHRAPIASHRGGQNTGVL---SPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAD 256
D G N GV SPR LV FK+ALDCFFAVWFVVGNVWIFGG +S D
Sbjct: 181 D---------SGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIFGGRTSLHD 231
Query: 257 APNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDAL 316
APNLYRLCIVFLA IGYA+PFILC ICCCLPCI+S++G+ EDL RGATAE+IDAL
Sbjct: 232 APNLYRLCIVFLAFGFIGYALPFILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDAL 291
Query: 317 PTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFRY 374
YKF+ KK +D + +GGV+AAGT+KER IS EDAVC + F N + R
Sbjct: 292 VAYKFQSKKF-----QDGEAGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLRE 346
Query: 375 L 375
L
Sbjct: 347 L 347
>gi|212723166|ref|NP_001132232.1| uncharacterized LOC100193667 [Zea mays]
gi|195643062|gb|ACG40999.1| protein binding protein [Zea mays]
gi|413944656|gb|AFW77305.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944657|gb|AFW77306.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413944658|gb|AFW77307.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 412
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/388 (46%), Positives = 240/388 (61%), Gaps = 49/388 (12%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDST-R 59
MDV E++T++ PLLME H I I DV+S+++ H ++G+D R
Sbjct: 1 MDVLPVGSERESQTDSHPLLME---------HAIGIPRHDVASTSTPHRDNNDGMDQLPR 51
Query: 60 HEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESR-RRRSPLNSGLWISVELVLTLSQ 118
+ SSG++ + S + N RR ++R RR+ LNSG WIS+EL + LSQ
Sbjct: 52 DSESSSGTT-----------DASYSPNAPLARRDDNRLRRQQSLNSGFWISIELAVNLSQ 100
Query: 119 VVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSS 178
+++A+ VLSV ++EHP APLFEW++GY GC+ATLP LYWRY Q NQ++ +VQ N +
Sbjct: 101 IIAAICVLSVSKNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQLA---TVQGSNQN 157
Query: 179 ARLNAPAAPF------SISVPRTSEVEDHRAPIASHRGG---QNTGVLSPRFKVLVEYFK 229
P F IS P SE A + + G N + +PR + ++FK
Sbjct: 158 Y---VPDNSFESSSFTGISPPPVSE-----AGVVTVSNGVLRNNVVITNPRAQAFADHFK 209
Query: 230 MALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCL 289
MALDCFFAVWFVVGNVW+FGGHSSA DAPNLYRLCI FL SCIGYAMPFILCA ICCCL
Sbjct: 210 MALDCFFAVWFVVGNVWVFGGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCL 269
Query: 290 PCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTE 349
PCI+S++G REDL + RGAT+++I+AL TY+F+ KK R+ + V A GT+
Sbjct: 270 PCIISLMGFREDLDENRGATSDAINALGTYRFRSKKPRNGEANEGGGG-----VFAPGTD 324
Query: 350 KERVISGEDAVCFCWTAGF--NHEFRYL 375
KER +S EDAVC A + N + R L
Sbjct: 325 KERAVSAEDAVCCICLARYVDNDDLRLL 352
>gi|326505380|dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 182/381 (47%), Positives = 236/381 (61%), Gaps = 36/381 (9%)
Query: 7 ELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSG 66
E ++ET+ PLL++ EN + E ID DV+SS++ ++GLD S
Sbjct: 7 ESEADSETDNHPLLIDHMENTAHREIAIDSPRDDVASSSTARREDNDGLDRLPRISESFS 66
Query: 67 SSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVL 126
+ T+ + S + +A +RR++SPLNS WIS+ELV+T+SQ+++A+ VL
Sbjct: 67 ET--------TTASNSQSAPLARRDANRARRQQSPLNSSCWISIELVVTVSQIIAAICVL 118
Query: 127 SVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSN----------QVSEPDSVQSRN 176
S+ R EHP +PLFEW++GY GCVATLPLLYWRY N Q P+S+ N
Sbjct: 119 SLSRKEHPHSPLFEWVIGYTVGCVATLPLLYWRYLHRNRPTTGQEPASQNFPPNSIPESN 178
Query: 177 SSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFF 236
S +AP + V T+ V + N +PR +V ++F+MALDCFF
Sbjct: 179 SHTTSSAPGMSEAGFVTETNGVSQN-----------NMLTRNPRAQVYADHFRMALDCFF 227
Query: 237 AVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSIL 296
AVWFVVGNVW+FGGHSSA DAPNLYRLCI FL SCIGYAMPFILCA ICCCLPCI+S++
Sbjct: 228 AVWFVVGNVWVFGGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIISLM 287
Query: 297 GLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISG 356
REDL Q +GA+AE+I+AL TYKFK KKS R+ GGVVAAGT KER++S
Sbjct: 288 SFREDLNQNKGASAEAINALRTYKFKTKKS-----RNGEGIEVGGGVVAAGTNKERIVSA 342
Query: 357 EDAVCFCWTAGF--NHEFRYL 375
EDAVC A + N + R L
Sbjct: 343 EDAVCCICLARYSNNDDLREL 363
>gi|242087091|ref|XP_002439378.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
gi|241944663|gb|EES17808.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
Length = 410
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/386 (46%), Positives = 236/386 (61%), Gaps = 45/386 (11%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
MD E E++T++ PLLME H+I I DV+S+++ ++G+D
Sbjct: 1 MDALPVESERESQTDSHPLLME---------HVIGIPRDDVASTSTPRRDNNDGMDHLPR 51
Query: 61 EDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVV 120
+ SS + + P+T + A RR++S LNSG WIS+EL + LSQ++
Sbjct: 52 DSESSSGTTAAYNSPNTPI--------ARRDDNRRRRQQS-LNSGFWISIELAVNLSQII 102
Query: 121 SAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSAR 180
+A+ VLSV R+EHP APLFEW++GY GC+ATLP LYWRY Q NQ+ +VQ N +
Sbjct: 103 AAICVLSVSRNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQLP---TVQGSNQNY- 158
Query: 181 LNAPAAPF------SISVPRTSEVEDHRAPIASHRGG---QNTGVLSPRFKVLVEYFKMA 231
P F IS P SE A + + G NT +PR + ++FKMA
Sbjct: 159 --VPDNSFESNSFTGISPPHVSE-----AGVVTVTNGVSRNNTVTTNPRAQAFADHFKMA 211
Query: 232 LDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPC 291
LDCFFAVWFVVGNVW+FGGHSS+ DAPNLYRLCI FL SCIGYAMPFILCA ICCCLPC
Sbjct: 212 LDCFFAVWFVVGNVWVFGGHSSSHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPC 271
Query: 292 IVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
I+S++G REDL + RGAT+++I+AL TYKFK KK R++ + V A GT+KE
Sbjct: 272 IISLMGFREDLNENRGATSDAINALGTYKFKTKKPRNTEGNEGGGG-----VFAPGTDKE 326
Query: 352 RVISGEDAVCFCWTAGF--NHEFRYL 375
R +S EDAVC A + N + R L
Sbjct: 327 RAVSAEDAVCCICLARYVDNDDLRLL 352
>gi|297738877|emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/348 (54%), Positives = 235/348 (67%), Gaps = 9/348 (2%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDRTSNGL-DSTRHEDGSSGSSRNP-TSQPSTS 78
MERPEN N EHI+DI +SS+S+ D S + + T HE+ + P + +S
Sbjct: 1 MERPENYENHEHIVDIVSASDASSSSSSDEDSAHVSNPTHHENRPLTDAWVPISQSSPSS 60
Query: 79 VNGSNTRNVAFTRR--GESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRA 136
+ S +RN + R G RRR SP NSGLWIS+E+V T S +V+++VVLS+ R E P+
Sbjct: 61 SDVSESRNSSIITRAHGPGRRRWSPFNSGLWISIEIVFTTSLIVASIVVLSLSRDEKPQT 120
Query: 137 PLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPD---SVQSRNSSARLNAPAAPFSISVP 193
PLF W+VGYAAGC A+LP+L+WRY + N E +Q + + + +IS+
Sbjct: 121 PLFAWVVGYAAGCAASLPILFWRYLRRNHDGEQGLNHMLQGSSQGSTTLESNSYITISLT 180
Query: 194 RTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSS 253
R++ E+ + G G + R VL +Y+KMALDCFFAVWFVVGNVWIFGGHSS
Sbjct: 181 RSAAEENLPDASTNTWNGHTMGASNARLSVLADYYKMALDCFFAVWFVVGNVWIFGGHSS 240
Query: 254 AADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESI 313
APNLYRLCIVFL SCIGYAMPFILCA ICCCLPCI+SILG DL+Q RGA+AESI
Sbjct: 241 FTAAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISILG-HGDLSQVRGASAESI 299
Query: 314 DALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVC 361
+ALPTYKFKLKK+ S N + SS + +GGVV AGTEKER ISGEDAVC
Sbjct: 300 NALPTYKFKLKKNGSGNSGEISSGV-EGGVVGAGTEKERAISGEDAVC 346
>gi|242056191|ref|XP_002457241.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
gi|241929216|gb|EES02361.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
Length = 408
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/362 (47%), Positives = 225/362 (62%), Gaps = 18/362 (4%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVN 80
M + N++ +H IDI ++D +S +++H +GLD H G S + S + +
Sbjct: 1 MAQTGNLSQRDHTIDIPMSDGTSPSTSHQDDPSGLDELHHSRGPSNEVPPGPERSSGTND 60
Query: 81 GSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFE 140
S++ N + R R+++PLNSG WIS+EL++ LSQ+V+A+ VLSV R+EHP APLF
Sbjct: 61 ASDSHNASSARIDRGHRQQNPLNSGFWISIELIVNLSQIVAAIAVLSVSRNEHPHAPLFT 120
Query: 141 WIVGYAAGCVATLPLLYWRYRQSN-----QVSEPDSVQSRNSSARLNAPAAPFSISVPRT 195
W++GY GC+A LP LYWRY N Q P S+ RN S N+ AA +S PRT
Sbjct: 121 WLLGYTIGCIAILPHLYWRYLHRNRPNMEQEMTPQSLSERNMS-ETNSYAA---VSSPRT 176
Query: 196 SEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAA 255
SE D R N + SPRF +V FK+ LDCFFAVWFVVGNVWIFG SSA
Sbjct: 177 SEAVDGTNSTGVSR--MNLPLASPRFYAMVACFKLMLDCFFAVWFVVGNVWIFGSRSSAH 234
Query: 256 DAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDA 315
DAPNLYR+CIVFLA I YA+PFILC ICCCLPCI+SILG+ EDL RGAT E+I+
Sbjct: 235 DAPNLYRICIVFLAFGFIVYALPFILCTMICCCLPCIISILGVHEDLDLNRGATTEAINT 294
Query: 316 LPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFR 373
L YKF+ K+ + ++ V+AAGT+KER+IS EDA+C + F N + R
Sbjct: 295 LVAYKFQSKRVHDGDVGEDGGG-----VLAAGTDKERIISAEDAICCICLSKFSNNEDLR 349
Query: 374 YL 375
L
Sbjct: 350 EL 351
>gi|302775586|ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/270 (59%), Positives = 195/270 (72%), Gaps = 13/270 (4%)
Query: 96 RRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPL 155
R+R SPLNSGLWIS+EL +T+SQ+V++++VLS+ R E P+APL W+ GYAAGC+ATLPL
Sbjct: 67 RQRISPLNSGLWISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPL 126
Query: 156 LYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTG 215
LYWRY N ++ S + +A + P S PR + P AS T
Sbjct: 127 LYWRYTHRNGTTQAHDQHESPSQSTPSAESLPPS---PRGTSYVALNIPSAS------TE 177
Query: 216 VLSPRFKV--LVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCI 273
V+ R +V LVE FK+ALDCFFAVWFVVGNVWIFGGHSS+ +APNLYRLCIVFL SCI
Sbjct: 178 VVESRARVGRLVEKFKIALDCFFAVWFVVGNVWIFGGHSSSREAPNLYRLCIVFLTFSCI 237
Query: 274 GYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRD 333
GYAMPFILCATICCCLPCI+++LG RE+ AQ RGA+AE I ALPTYKFK + S S D
Sbjct: 238 GYAMPFILCATICCCLPCIIALLGFREEQAQNRGASAEVIAALPTYKFKSRPSSESKDGS 297
Query: 334 NSSSIG--DGGVVAAGTEKERVISGEDAVC 361
S S G +GG VAAGT+KER +S +DAVC
Sbjct: 298 ESDSEGSNEGGFVAAGTDKERAVSADDAVC 327
>gi|302756339|ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/281 (57%), Positives = 195/281 (69%), Gaps = 24/281 (8%)
Query: 96 RRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPL 155
R+R SPLNSGLWIS+EL +T+SQ+V++++VLS+ R E P+APL W+ GYAAGC+ATLPL
Sbjct: 67 RQRISPLNSGLWISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPL 126
Query: 156 LYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTG 215
LYWRY N ++ S + +A + P S PR + P AS T
Sbjct: 127 LYWRYTHRNGTTQAHDQHESPSQSTPSAESLPPS---PRGTSYVALNIPSAS------TE 177
Query: 216 VLSPRFKV-------------LVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYR 262
V+ PR + LVE FK+ALDCFFAVWFVVGNVWIFGGHSS+ +APNLYR
Sbjct: 178 VVEPRARSRGRDVDSASDNSGLVEKFKIALDCFFAVWFVVGNVWIFGGHSSSREAPNLYR 237
Query: 263 LCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFK 322
LCIVFL SCIGYAMPFILCATICCCLPCI+++LG RE+ AQ RGA+AE I ALPTYKFK
Sbjct: 238 LCIVFLTFSCIGYAMPFILCATICCCLPCIIALLGFREEQAQNRGASAEVIAALPTYKFK 297
Query: 323 LKKSRSSNDRDNSSSIG--DGGVVAAGTEKERVISGEDAVC 361
+ S S D S S G +GG VAAGT+KER +S +DAVC
Sbjct: 298 SRPSSESKDGSESDSEGSNEGGFVAAGTDKERAVSADDAVC 338
>gi|226500896|ref|NP_001146330.1| uncharacterized protein LOC100279906 [Zea mays]
gi|219886659|gb|ACL53704.1| unknown [Zea mays]
Length = 414
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/362 (46%), Positives = 229/362 (63%), Gaps = 24/362 (6%)
Query: 26 NVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRN--PTSQPSTSVNGSN 83
+ + H+I + + +S++++H + D ED S S++ S PS S +
Sbjct: 5 SCDGVHHVISVAHGETASTSTSHQDMCSDSDEPHQEDRLSTSTQTLSSESSPSISPTAYS 64
Query: 84 TRNVAFTRRGE-SRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWI 142
TRN++F RR RSP NSGLWIS E+V+ ++QVV+A+V+L RHEHP APLF WI
Sbjct: 65 TRNLSFPRRDSIYGHGRSPWNSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWI 124
Query: 143 VGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVP-RTSEVEDH 201
+GY GC+A+LPL+YWRY N+ + + Q P + +P ++SE +H
Sbjct: 125 IGYTLGCIASLPLIYWRYVHRNRHLDQEPQQ----------PPTTYPTLIPSQSSEGRNH 174
Query: 202 R-APIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHS---SAADA 257
R + I H G + PR VL +FK +DCFFAVWFVVGNVWIFGG S A DA
Sbjct: 175 RTSGIVLHLG--CISISCPRLSVLAYHFKTGVDCFFAVWFVVGNVWIFGGRSISSDAQDA 232
Query: 258 PNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALP 317
PN+YRLC+ FLA+SC+GYA+PFI+CA ICCC PC++S+L L+EDL Q RGAT E IDALP
Sbjct: 233 PNMYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALP 292
Query: 318 TYKFKLKKSRSSNDRDNSSS--IGDGGVVAAGTEKERVISGEDAV-CFCWTA-GFNHEFR 373
TYKFK K+ ++ SSS + +GG++ GT+KERV+S EDAV C C T G + E R
Sbjct: 293 TYKFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELR 352
Query: 374 YL 375
L
Sbjct: 353 EL 354
>gi|242048934|ref|XP_002462211.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
gi|241925588|gb|EER98732.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
Length = 415
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/355 (47%), Positives = 232/355 (65%), Gaps = 20/355 (5%)
Query: 31 EHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVN--GSNTRNVA 88
EH+I + + +S++++H + D ED S S++ P+S+ S S++ ++RN++
Sbjct: 11 EHVISVAHGETASTSTSHQDMYSDSDEPHQEDRQSTSTQTPSSESSPSISPIAYSSRNLS 70
Query: 89 FTRRGE-SRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAA 147
F RR RSP NSGLWIS E+V+ ++QVV+A+V+L RHEHP APLF WI+GY
Sbjct: 71 FPRRDSIYGHGRSPWNSGLWISFEVVMYIAQVVAAIVILVFSRHEHPHAPLFAWIIGYTV 130
Query: 148 GCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIAS 207
GC+A+LPL+YWRY N+ + + Q + +++ ++SE +HR
Sbjct: 131 GCIASLPLIYWRYVHRNRHLDQEPQQPPTTYP---------TLTPSQSSEGRNHRTSGIV 181
Query: 208 HRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHS---SAADAPNLYRLC 264
R G + PR VL +FK A+DCFFAVWFVVGNVWIFGG S A DAPN+YRLC
Sbjct: 182 LRLG-CIAISCPRLSVLAYHFKTAVDCFFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLC 240
Query: 265 IVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLK 324
+ FLA+SC+GYA+PFI+CA ICCC PC++S+L L+EDL Q RGAT E IDALPTYKFK K
Sbjct: 241 LAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTYKFKPK 300
Query: 325 KSRSSNDRDNSSS--IGDGGVVAAGTEKERVISGEDAV-CFCWTA-GFNHEFRYL 375
++++ SSS + +GG++ GT+KERV+S EDAV C C T G + E R L
Sbjct: 301 RNKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELREL 355
>gi|414885026|tpg|DAA61040.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414885027|tpg|DAA61041.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 414
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/361 (46%), Positives = 229/361 (63%), Gaps = 22/361 (6%)
Query: 26 NVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRN--PTSQPSTSVNGSN 83
+ + H+I + + +S++++H + D ED S S++ S PS S +
Sbjct: 5 SCDGVHHVISVAHGETASTSTSHQDMCSDSDEPHQEDRLSTSTQTLSSESSPSISPTAYS 64
Query: 84 TRNVAFTRRGE-SRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWI 142
TRN++F RR RSP NSGLWIS E+V+ ++QVV+A+V+L RHEHP APLF WI
Sbjct: 65 TRNLSFPRRDSIYGHGRSPWNSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWI 124
Query: 143 VGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHR 202
+GY GC+A+LPL+YWRY N+ + + Q + +++ ++SE +HR
Sbjct: 125 IGYTLGCIASLPLIYWRYVHRNRHLDQEPQQPPTTYP---------TLTPSQSSEGRNHR 175
Query: 203 -APIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHS---SAADAP 258
+ I H G + PR VL +FK +DCFFAVWFVVGNVWIFGG S A DAP
Sbjct: 176 TSGIVLHLG--CISISCPRLSVLAYHFKTGVDCFFAVWFVVGNVWIFGGRSISSDAQDAP 233
Query: 259 NLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPT 318
N+YRLC+ FLA+SC+GYA+PFI+CA ICCC PC++S+L L+EDL Q RGAT E IDALPT
Sbjct: 234 NMYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPT 293
Query: 319 YKFKLKKSRSSNDRDNSSS--IGDGGVVAAGTEKERVISGEDAV-CFCWTA-GFNHEFRY 374
YKFK K+ ++ SSS + +GG++ GT+KERV+S EDAV C C T G + E R
Sbjct: 294 YKFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELRE 353
Query: 375 L 375
L
Sbjct: 354 L 354
>gi|222641326|gb|EEE69458.1| hypothetical protein OsJ_28860 [Oryza sativa Japonica Group]
Length = 616
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/377 (45%), Positives = 239/377 (63%), Gaps = 19/377 (5%)
Query: 8 LHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGS 67
+ + E + ME + EH I+++ + +S++++H + D + +D S S
Sbjct: 164 IRAKLEINKSKIFMEHATCDDVHEHAINVSHGETASTSTSHQDLHSDSDDSHQDDRPSTS 223
Query: 68 SRNPTSQ--PSTSVNGSNTRNVAFTRRGESRRR-RSPLNSGLWISVELVLTLSQVVSAVV 124
++ P+ Q STS NTRN++F RR RS NSGLWIS ELV+ + Q+V+A+
Sbjct: 224 TQTPSPQSSASTSPTAYNTRNLSFPRRDSMYGHGRSIWNSGLWISFELVIYVVQIVAAIF 283
Query: 125 VLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAP 184
VL R EHP APLF WI+GY GC+A++PL+ WR N+ SE + Q P
Sbjct: 284 VLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQEPEQ---------PP 334
Query: 185 AAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGN 244
AA +++ ++SE + R+ G T + PR +L +FK A+DCFFAVWFVVGN
Sbjct: 335 AAYPNLTSSQSSEGRNQRSSGTVLHFGCIT-ISCPRPSILAYHFKTAVDCFFAVWFVVGN 393
Query: 245 VWIFGGHSSAAD---APNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLRED 301
VWIFGGHS+ +D APN+YRLC+ FLA+SC+GYA+PF++CA ICCC PC++S+L L+ED
Sbjct: 394 VWIFGGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCAAICCCFPCLISLLRLQED 453
Query: 302 LAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSS-SIGDGGVVAAGTEKERVISGEDAV 360
L TRGAT E IDALPTYKFK K+S+ D +SS ++ +GG++ GT+KER++S EDAV
Sbjct: 454 LGHTRGATQELIDALPTYKFKPKRSKMWVDHASSSENLSEGGILGPGTKKERIVSAEDAV 513
Query: 361 -CFCWTA-GFNHEFRYL 375
C C T G + E R L
Sbjct: 514 CCICLTKYGDDDELREL 530
>gi|115478553|ref|NP_001062870.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|48716984|dbj|BAD23676.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|113631103|dbj|BAF24784.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|215767689|dbj|BAG99917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201929|gb|EEC84356.1| hypothetical protein OsI_30879 [Oryza sativa Indica Group]
gi|347737076|gb|AEP20519.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 414
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 167/354 (47%), Positives = 232/354 (65%), Gaps = 19/354 (5%)
Query: 31 EHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQ--PSTSVNGSNTRNVA 88
EH I+++ + +S++++H + D + +D S S++ P+ Q STS NTRN++
Sbjct: 11 EHAINVSHGETASTSTSHQDLHSDSDDSHQDDRPSTSTQTPSPQSSASTSPTAYNTRNLS 70
Query: 89 FTRRGESRRR-RSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAA 147
F RR RS NSGLWIS ELV+ + Q+V+A+ VL R EHP APLF WI+GY
Sbjct: 71 FPRRDSMYGHGRSIWNSGLWISFELVIYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYTI 130
Query: 148 GCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIAS 207
GC+A++PL+ WR N+ SE + Q PAA +++ ++SE + R+
Sbjct: 131 GCIASIPLICWRCAHRNRPSEQEPEQ---------PPAAYPNLTSSQSSEGRNQRSSGTV 181
Query: 208 HRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAD---APNLYRLC 264
G T + PR +L +FK A+DCFFAVWFVVGNVWIFGGHS+ +D APN+YRLC
Sbjct: 182 LHFGCIT-ISCPRPSILAYHFKTAVDCFFAVWFVVGNVWIFGGHSTLSDSQEAPNMYRLC 240
Query: 265 IVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLK 324
+ FLA+SC+GYA+PF++CA ICCC PC++S+L L+EDL TRGAT E IDALPTYKFK K
Sbjct: 241 LAFLALSCVGYAIPFVMCAAICCCFPCLISLLRLQEDLGHTRGATQELIDALPTYKFKPK 300
Query: 325 KSRSSNDRDNSS-SIGDGGVVAAGTEKERVISGEDAV-CFCWTA-GFNHEFRYL 375
+S+ D +SS ++ +GG++ GT+KER++S EDAV C C T G + E R L
Sbjct: 301 RSKMWVDHASSSENLSEGGILGPGTKKERIVSAEDAVCCICLTKYGDDDELREL 354
>gi|326517741|dbj|BAK03789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 229/360 (63%), Gaps = 21/360 (5%)
Query: 26 NVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQ--PSTSVNGSN 83
N + EH+I++ + +S++++H + D ED S S+R P+ Q STS +
Sbjct: 5 NCDAHEHVINVAHGETASTSTSHQDLHSDTDEPHQEDRPSTSTRTPSPQSSASTSPTAYS 64
Query: 84 TRNVAFTRRGESRRRRSPL-NSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWI 142
+RN++F RR R + L NSGLWIS E V+ ++Q+ +A+V+L + RHE P APL WI
Sbjct: 65 SRNLSFPRRDSFYGRGTSLWNSGLWISFEFVMYVAQITAAIVILILSRHELPHAPLVAWI 124
Query: 143 VGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHR 202
+GY GC A+LPL+YWRY N+ SE + Q + L + +SE + R
Sbjct: 125 IGYTVGCTASLPLVYWRYVHRNRPSEEEPEQPPTTYPTLTS----------SSSEGRNQR 174
Query: 203 APIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH---SSAADAPN 259
+ G T + PR +L + K A+DCFFA+WFVVGNVWIFGG S A DAPN
Sbjct: 175 TSGSVLHLGCIT-IACPRPSILAYHSKTAVDCFFAIWFVVGNVWIFGGRGTSSDAQDAPN 233
Query: 260 LYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTY 319
+YRLC+ FLA+SC+GYA+PFI+CA ICCC PC++S+L L+EDL Q+RGAT E IDALPTY
Sbjct: 234 MYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQSRGATQELIDALPTY 293
Query: 320 KFKLKKSRS--SNDRDNSSSIGDGGVVAAGTEKERVISGEDAV-CFCWTA-GFNHEFRYL 375
KFK K+S++ + +S ++ +GG++ GT+KER++S EDAV C C T G + E R L
Sbjct: 294 KFKPKRSKNWVLDHASSSENLSEGGILGPGTKKERIVSAEDAVCCICLTKYGDDDELREL 353
>gi|168025500|ref|XP_001765272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683591|gb|EDQ70000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/273 (57%), Positives = 191/273 (69%), Gaps = 22/273 (8%)
Query: 96 RRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPL 155
R+R SPLNSGLW+S+EL +T+SQ++++++VL + R+EHP+APL W+ GYAAGC+ATLPL
Sbjct: 1 RQRPSPLNSGLWVSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPL 60
Query: 156 LYWRY-RQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNT 214
LYWRY Q + EP S +SA P++ + R +A H Q +
Sbjct: 61 LYWRYTHQYMRTREPAS-----TSASEPNPSSGGVGGSSYVTLTPGSRDDMA-HGSRQRS 114
Query: 215 GVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIG 274
GV + FK+ALDCFFA+WFVVGNVWIFGGHS+A DAPNLYRLCIV L SCIG
Sbjct: 115 GV--------GQVFKIALDCFFAIWFVVGNVWIFGGHSAAHDAPNLYRLCIVLLTFSCIG 166
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSS----- 329
YAMPFILCATICCCLPCI+++LG RED Q RGA+ E+I ALPTYKFK K S S
Sbjct: 167 YAMPFILCATICCCLPCIIALLGFREDQNQPRGASQEAIAALPTYKFKAKASNESKLNKD 226
Query: 330 -NDRDNSSSIGDGGVVAAGTEKERVISGEDAVC 361
ND D S G+GG VAAGTEKER +S +DAVC
Sbjct: 227 GNDSD-SEGAGEGGWVAAGTEKERWVSADDAVC 258
>gi|168025496|ref|XP_001765270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683589|gb|EDQ69998.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/268 (56%), Positives = 190/268 (70%), Gaps = 16/268 (5%)
Query: 96 RRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPL 155
R+R SPLNSGLW+S+EL +T+SQ++++++VL + R+EHP+APL W+ GYAAGC+ATLPL
Sbjct: 1 RQRPSPLNSGLWVSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPL 60
Query: 156 LYWRY-RQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNT 214
LYWRY Q + EP S +SA P++ + R +A H Q +
Sbjct: 61 LYWRYTHQYMRTREPAS-----TSASEPNPSSGGVGGSSYVTLTPGSRDDMA-HGSRQRS 114
Query: 215 GVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIG 274
GV + FK+ALDCFFA+WFVVGNVWIFGGHS+A DAPNLYRLCIV L SCIG
Sbjct: 115 GV--------GQVFKIALDCFFAIWFVVGNVWIFGGHSAAHDAPNLYRLCIVLLTFSCIG 166
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSN-DRD 333
YAMPFILCATICCCLPCI+++LG RED Q RGA+ E+I ALPTYKFK K S S ++D
Sbjct: 167 YAMPFILCATICCCLPCIIALLGFREDQNQPRGASQEAIAALPTYKFKAKASNESKLNKD 226
Query: 334 NSSSIGDGGVVAAGTEKERVISGEDAVC 361
+ S +G VAAGTEKER +S +DAVC
Sbjct: 227 GNDSDSEGAWVAAGTEKERWVSADDAVC 254
>gi|293336813|ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays]
gi|224033719|gb|ACN35935.1| unknown [Zea mays]
gi|414876051|tpg|DAA53182.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 410
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 222/359 (61%), Gaps = 12/359 (3%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVN 80
M N++ +H IDI ++D +++++H +G D G S + +P+ S+ N
Sbjct: 1 MAHTGNLSQRDHTIDIPMSDGMTASTSHQDDHSGSDELHRSRGPS-NEVSPSPDTSSGTN 59
Query: 81 G-SNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLF 139
SN+ N + R R+++PLNSG WIS+EL++ LSQ+V+AVVVLSV R+EHP+APLF
Sbjct: 60 DVSNSHNASSARIDRGHRQQNPLNSGFWISIELIVNLSQIVAAVVVLSVSRNEHPQAPLF 119
Query: 140 EWIVGYAAGCVATLPLLYWRYRQSNQVS-EPDSVQSRNSSARLNAPAAPFSISVPRTSEV 198
W++GY GC+A LP LYWRY N++ E + R+ ++ + +S P SE
Sbjct: 120 TWLLGYTIGCIAILPHLYWRYLHRNRLDMEQEMPPQRSPGMNISEINSYAVVSSPHASEA 179
Query: 199 EDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAP 258
+ R N + SPRF +V FK+ LDCFFAVWFVVGNVW+FG SSA DAP
Sbjct: 180 VEGANSTGVSR--TNLPMASPRFYAMVACFKLVLDCFFAVWFVVGNVWMFGSRSSAHDAP 237
Query: 259 NLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPT 318
NLYR+C+VFLA IGYA+PFILC ICCCLPCI+S+LG+ EDL RGAT E+I+ L
Sbjct: 238 NLYRICLVFLAFGFIGYALPFILCTMICCCLPCIISVLGVHEDLDMNRGATTEAINTLVA 297
Query: 319 YKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFRYL 375
YKF+ K+ + + V+AAGT+KER IS EDA+C + F N + R L
Sbjct: 298 YKFQSKRVHDGDVGGDGGG-----VLAAGTDKERTISAEDAICCICLSKFSNNEDLREL 351
>gi|147859662|emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
Length = 547
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/158 (79%), Positives = 139/158 (87%), Gaps = 2/158 (1%)
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPF 279
R KVLVEYFKMALDCFFAVWFVVGNVWIFGGHSS+++APNLYRLCIVFL SCIGYAMPF
Sbjct: 337 RLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPF 396
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIG 339
ILCATICCCLPCI+SILG REDL QTRGAT+ESI+ALPTYKFKLKK+R+ +DR+ +S G
Sbjct: 397 ILCATICCCLPCIISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAG 456
Query: 340 DGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFRYL 375
+GGVVAAGTE+ERVISGEDAVC A + N E R L
Sbjct: 457 EGGVVAAGTERERVISGEDAVCCICLAKYANNDELREL 494
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 160/227 (70%), Gaps = 2/227 (0%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDIT-ITDVSSSNSTHDRTSNGLDSTR 59
M +PS ELH++++++ +PLLME+P N + EH+IDIT D SSSNS++D S LD +
Sbjct: 1 MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHVIDITRSGDASSSNSSNDGPSTSLDQLQ 60
Query: 60 HEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQV 119
H+D + S+R P SQPS S + + +F RR ++RRRRSPLNSGLWIS+EL LT+SQ+
Sbjct: 61 HDDRPASSARVPISQPSFSSSNVSNSRNSFRRRADARRRRSPLNSGLWISIELALTVSQI 120
Query: 120 VSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSA 179
+++ VVLS+ RHEHP APLF WIVGYA+GCVATLP+LYWR+R NQ E +S QSR S
Sbjct: 121 IASXVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQVSF 180
Query: 180 RLNAPAAP-FSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLV 225
N P P FS+SV TSE ED + + + R Q+ LS R++ +V
Sbjct: 181 HSNLPGGPTFSLSVTGTSEXEDRQPSVPATRNSQSVRRLSARYEFVV 227
>gi|414885024|tpg|DAA61038.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 382
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 204/358 (56%), Gaps = 48/358 (13%)
Query: 26 NVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRN--PTSQPSTSVNGSN 83
+ + H+I + + +S++++H + D ED S S++ S PS S +
Sbjct: 5 SCDGVHHVISVAHGETASTSTSHQDMCSDSDEPHQEDRLSTSTQTLSSESSPSISPTAYS 64
Query: 84 TRNVAFTRRGE-SRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWI 142
TRN++F RR RSP NSGLWIS E+V+ ++QVV+A+V+L RHEHP APLF WI
Sbjct: 65 TRNLSFPRRDSIYGHGRSPWNSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWI 124
Query: 143 VGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHR 202
+GY GC+A+LPL+YWRY N+ + + Q + +++ ++SE +HR
Sbjct: 125 IGYTLGCIASLPLIYWRYVHRNRHLDQEPQQPPTTYP---------TLTPSQSSEGRNHR 175
Query: 203 -APIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLY 261
+ I H G + S S A DAPN+Y
Sbjct: 176 TSGIVLHLGCISISCPSIS-------------------------------SDAQDAPNMY 204
Query: 262 RLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF 321
RLC+ FLA+SC+GYA+PFI+CA ICCC PC++S+L L+EDL Q RGAT E IDALPTYKF
Sbjct: 205 RLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTYKF 264
Query: 322 KLKKSRSSNDRDNSSS--IGDGGVVAAGTEKERVISGEDAV-CFCWTA-GFNHEFRYL 375
K K+ ++ SSS + +GG++ GT+KERV+S EDAV C C T G + E R L
Sbjct: 265 KPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELREL 322
>gi|47497169|dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 199
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 118/148 (79%), Gaps = 4/148 (2%)
Query: 230 MALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCL 289
MALDCFFAVWFVVGNVWIFGG SSAADAPNLYRLCIVFL SCIGYAMPFILCA ICCCL
Sbjct: 1 MALDCFFAVWFVVGNVWIFGGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCL 60
Query: 290 PCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTE 349
PCI+S++G RED TRGAT+ESI++LPTYKFK KK R S+ N + DGG+VAAGT+
Sbjct: 61 PCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHSS--GNEAEGQDGGIVAAGTD 118
Query: 350 KERVISGEDAVCFCWTAGFNH--EFRYL 375
KER +S EDAVC A + H E R L
Sbjct: 119 KERSLSAEDAVCCICLAKYAHNDELREL 146
>gi|357153329|ref|XP_003576416.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 317
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 123/167 (73%), Gaps = 7/167 (4%)
Query: 216 VLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH---SSAADAPNLYRLCIVFLAISC 272
V PR +L + K A+DCFFAVWFVVGNVWIFGG S A DAPN+YRLC+ FLA+SC
Sbjct: 91 VSCPRPSILAYHSKTAVDCFFAVWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALSC 150
Query: 273 IGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDR 332
+GYA+PFI+CA ICCC PC++S+L L+EDL QTRGAT E I+ALPTYKFK ++S++
Sbjct: 151 VGYAVPFIMCAAICCCFPCLISVLRLQEDLGQTRGATQELIEALPTYKFKPRRSKNWGLD 210
Query: 333 DNSSS--IGDGGVVAAGTEKERVISGEDAV-CFCWTA-GFNHEFRYL 375
SSS + +GG++ GT+KER +S EDAV C C T G + E R L
Sbjct: 211 YASSSENLSEGGILGPGTKKERTVSAEDAVCCICLTKYGDDDELREL 257
>gi|414885025|tpg|DAA61039.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 241
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 140/243 (57%), Gaps = 18/243 (7%)
Query: 28 NNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRN--PTSQPSTSVNGSNTR 85
+ H+I + + +S++++H + D ED S S++ S PS S +TR
Sbjct: 7 DGVHHVISVAHGETASTSTSHQDMCSDSDEPHQEDRLSTSTQTLSSESSPSISPTAYSTR 66
Query: 86 NVAFTRRGE-SRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVG 144
N++F RR RSP NSGLWIS E+V+ ++QVV+A+V+L RHEHP APLF WI+G
Sbjct: 67 NLSFPRRDSIYGHGRSPWNSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIG 126
Query: 145 YAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHR-A 203
Y GC+A+LPL+YWRY N+ + + Q + L ++SE +HR +
Sbjct: 127 YTLGCIASLPLIYWRYVHRNRHLDQEPQQPPTTYPTLTP---------SQSSEGRNHRTS 177
Query: 204 PIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH---SSAADAPNL 260
I H G + PR VL +FK +DCFFAVWFVVGNVWIFGG S A DAPN+
Sbjct: 178 GIVLHLG--CISISCPRLSVLAYHFKTGVDCFFAVWFVVGNVWIFGGRSISSDAQDAPNM 235
Query: 261 YRL 263
YR
Sbjct: 236 YRF 238
>gi|297743323|emb|CBI36190.3| unnamed protein product [Vitis vinifera]
Length = 920
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 137/262 (52%), Gaps = 60/262 (22%)
Query: 102 LNSGLWISVELVLTLSQVVSAVVVLSVFR-HEHPRAPLFEWIVGYAAGCVATLPLLYWRY 160
SGLWIS++ +L++ Q+V+++VVLS+ + + P LF W+VGYA GCV LPLLY RY
Sbjct: 38 FESGLWISLQFILSVIQIVASIVVLSLSKLNGDPDYKLFSWVVGYACGCVLMLPLLYCRY 97
Query: 161 RQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPR 220
I V + L R
Sbjct: 98 ---------------------------ILILVKKL--------------------FLICR 110
Query: 221 FKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFI 280
+VE KM+L CFFAVWFV+GNVW+FG S+ D L LC+VFLA CI YAMP
Sbjct: 111 LYGIVEVLKMSLSCFFAVWFVLGNVWVFGSSSTGKDDTKLETLCLVFLASGCIMYAMPVF 170
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAE-SIDALPTYKFKLKKSRSSNDRDNSSSIG 339
CA C LP ++ + L Q R A + S +ALPTY FKLK++ + G
Sbjct: 171 RCAAFCLLLPFLI-LPTLASPQEQAREANPDYSFNALPTYNFKLKENGT----------G 219
Query: 340 DGGVVAAGTEKERVISGEDAVC 361
+ GV+AAGT+KER ISGEDAVC
Sbjct: 220 ESGVLAAGTDKERAISGEDAVC 241
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 87/155 (56%), Gaps = 14/155 (9%)
Query: 224 LVEYFKMALDCFFAVWFVVGNVWIFGG-HSSAADAPNLYRLCIVFLAISCIGYAMPFILC 282
+V +FKM L CFF VW V+G VWI G S DA L LC+V C YA+P +
Sbjct: 346 VVRFFKMTLSCFFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYAIPGMRF 405
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
A++C LPC++ L + RGAT ESI+ LPTYKFK K+ N R G+GG
Sbjct: 406 ASLCLFLPCLICAT-LVSPHEKPRGATPESINELPTYKFKSKE----NGR------GEGG 454
Query: 343 VVAAGTEKERVISGEDAVCFCWTAGF--NHEFRYL 375
V AAGT KER +S EDAVC + N E R L
Sbjct: 455 VWAAGTIKERTLSEEDAVCCICLGQYADNEELREL 489
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 74/161 (45%), Gaps = 38/161 (23%)
Query: 202 RAPIA-SHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNL 260
R P+ S Q + S R V+VE KM L CFFA WFV+GN+W ++DA L
Sbjct: 715 RCPLCQSEHLIQRSWFPSCRLYVVVEVLKMVLGCFFAFWFVLGNIW---AARVSSDAEKL 771
Query: 261 YRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYK 320
LC + L +CI YA+P I C LP ++S L R T DA+
Sbjct: 772 DMLCQLLLKTACIMYAIPAIGCFL----LPRMIS-----SALMAPRNLTKNGTDAV---- 818
Query: 321 FKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVC 361
GV+AAGTE+ER IS EDAVC
Sbjct: 819 ---------------------GVLAAGTEQERAISEEDAVC 838
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 224 LVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCA 283
++E F + + CFF VWFV G+V FG SS DAP L L L C YAMP I A
Sbjct: 550 VMEVFWLTMSCFFVVWFVFGSVCFFGVSSSIHDAPILEGLFKALLLSGCTIYAMPGIAIA 609
Query: 284 TICCCLPCIVSILGLREDLAQTRGATAESI--DALPTYKFKLKKSRSSNDRDNSSSIGDG 341
+ C ++ L L + + RG + + LPTYKFK K++ G G
Sbjct: 610 SYCLFFSWLILSLLLLKLREKHRGTSTPDSPPNVLPTYKFKSKEN------------GGG 657
Query: 342 GVVAAGTEKERV-ISGEDAVCFCWTAGF--NHEFRYL 375
++AAGT+K+ +SGED VC + N E R L
Sbjct: 658 VLLAAGTKKKSASLSGEDVVCCICLGNYADNEELREL 694
>gi|255639547|gb|ACU20068.1| unknown [Glycine max]
Length = 168
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 116/163 (71%), Gaps = 3/163 (1%)
Query: 1 MDVPSAELHTETETETFPLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRH 60
MDV S ++ T+T+ PLLME+PE N +H+IDIT + + S + + + T++
Sbjct: 1 MDVTSLGSNSNTQTDQHPLLMEQPETRNGHQHVIDITRNGEALTTSYRNDQHSEMHLTQN 60
Query: 61 EDGSSGSSRNPTSQP-STSVNGSNTRNVAFTRRGES--RRRRSPLNSGLWISVELVLTLS 117
+D +G +++ + Q S+S N+RN A RRG+ R RSPLNSGLWISVELV+T+S
Sbjct: 61 QDQPAGDAQDSSHQTTSSSAPRLNSRNSASLRRGDGYGHRGRSPLNSGLWISVELVVTVS 120
Query: 118 QVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRY 160
Q+++++VVLS+ R+E+P+APLF WIVGY +GCVATLP+LYWR+
Sbjct: 121 QIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRF 163
>gi|225442723|ref|XP_002280502.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 295
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 141/278 (50%), Gaps = 59/278 (21%)
Query: 102 LNSGLWISVELVLTLSQVVSAVVVLSV-FRHEHPRAPLFEWIVGYAAGCVATLPLLYWRY 160
L+SGL +S++L+LT++Q+V+++VVL V EH LF W++GYA+GC LPLLY RY
Sbjct: 36 LDSGLCLSIQLILTVTQMVASLVVLWVSMAQEHRYPKLFPWVMGYASGCALMLPLLYSRY 95
Query: 161 RQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPR 220
+ ++++ + E E +
Sbjct: 96 HIAR------------------------TLNLGSSEEAE--------------------K 111
Query: 221 FKVLVEYFKMALDCFFAVWFVVGNVWIFGG-HSSAADAPNLYRLCIVFLAISCIGYAMPF 279
+V +FKM L CFF VW V+G VWI G S DA L LC+V C YA+P
Sbjct: 112 LFGVVRFFKMTLSCFFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYAIPG 171
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIG 339
+ A++C LPC++ L + RGAT ESI+ LPTYKFK K+ N R G
Sbjct: 172 MRFASLCLFLPCLICA-TLVSPHEKPRGATPESINELPTYKFKSKE----NGR------G 220
Query: 340 DGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFRYL 375
+GGV AAGT KER +S EDAVC + N E R L
Sbjct: 221 EGGVWAAGTIKERTLSEEDAVCCICLGQYADNEELREL 258
>gi|414885022|tpg|DAA61036.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 113
Score = 140 bits (353), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
Query: 260 LYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTY 319
+YRLC+ FLA+SC+GYA+PFI+CA ICCC PC++S+L L+EDL Q RGAT E IDALPTY
Sbjct: 1 MYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTY 60
Query: 320 KFKLKKSRSSNDRDNSSS--IGDGGVVAAGTEKERVISGEDAV 360
KFK K+ ++ SSS + +GG++ GT+KERV+S EDAV
Sbjct: 61 KFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAV 103
>gi|194699464|gb|ACF83816.1| unknown [Zea mays]
gi|414885023|tpg|DAA61037.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 180
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 89/120 (74%), Gaps = 4/120 (3%)
Query: 260 LYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTY 319
+YRLC+ FLA+SC+GYA+PFI+CA ICCC PC++S+L L+EDL Q RGAT E IDALPTY
Sbjct: 1 MYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTY 60
Query: 320 KFKLKKSRSSNDRDNSSS--IGDGGVVAAGTEKERVISGEDAV-CFCWTA-GFNHEFRYL 375
KFK K+ ++ SSS + +GG++ GT+KERV+S EDAV C C T G + E R L
Sbjct: 61 KFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELREL 120
>gi|147819085|emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
Length = 343
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 144/303 (47%), Gaps = 63/303 (20%)
Query: 36 ITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQ--PSTSVNGSNTRNVAFTRR- 92
I+++ S S + DR + G+ + SSR P S T++ S R +F RR
Sbjct: 17 ISVSFSSLSPAGEDRMAAGVRNR--------SSRAPPSSFLIRTAMRISRARWFSFLRRV 68
Query: 93 ------GESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYA 146
S +P NS W+ +E + + Q+ LSV + E P P+ WIVGY
Sbjct: 69 FHYQNGSRSDLGANPFNSNTWMILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIVGYD 128
Query: 147 AGCVATLPLLYWRYR-----QSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDH 201
GCV +L LLYWRY+ Q + S PD Q RN+ E+
Sbjct: 129 FGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRNN---------------------EES 167
Query: 202 RAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNL 260
R+ SH L+ + +L+ FFA+WFV+GNVW+F S AP L
Sbjct: 168 RS---SH---------------LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKL 209
Query: 261 YRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTY 319
+ LCI LA + I Y+ PF+L +CCC+P + ++LG ++ +GA+ + I LP++
Sbjct: 210 HVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSW 269
Query: 320 KFK 322
+FK
Sbjct: 270 RFK 272
>gi|296089966|emb|CBI39785.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 144/303 (47%), Gaps = 63/303 (20%)
Query: 36 ITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQ--PSTSVNGSNTRNVAFTRR- 92
I+++ S S + DR + G+ + SSR P S T++ S R +F RR
Sbjct: 17 ISVSFSSLSPAGEDRMAAGVRNR--------SSRAPPSSFLIRTAMRISRARWFSFLRRV 68
Query: 93 ------GESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYA 146
S +P NS W+ +E + + Q+ LSV + E P P+ WIVGY
Sbjct: 69 FHYQNGSRSDLGANPFNSSTWMILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIVGYD 128
Query: 147 AGCVATLPLLYWRYR-----QSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDH 201
GCV +L LLYWRY+ Q + S PD Q RN+ E+
Sbjct: 129 FGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRNN---------------------EES 167
Query: 202 RAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNL 260
R+ SH L+ + +L+ FFA+WFV+GNVW+F S AP L
Sbjct: 168 RS---SH---------------LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKL 209
Query: 261 YRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTY 319
+ LCI LA + I Y+ PF+L +CCC+P + ++LG ++ +GA+ + I LP++
Sbjct: 210 HVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSW 269
Query: 320 KFK 322
+FK
Sbjct: 270 RFK 272
>gi|147815560|emb|CAN70531.1| hypothetical protein VITISV_010219 [Vitis vinifera]
Length = 305
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 12/148 (8%)
Query: 215 GVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIG 274
G ++ + +VE KM+L CFFAVWFV+GNVW+FG S+ D L LC+VFLA CI
Sbjct: 99 GTVNLQLYGIVEVLKMSLSCFFAVWFVLGNVWVFGSSSTGKDDTKLETLCLVFLASGCIM 158
Query: 275 YAMPFILCATICCCLPCIVSILGLREDLAQTRGATAE-SIDALPTYKFKLKKSRSSNDRD 333
YAMP CA C LP ++ + L Q R A + S +ALPTY FKLK++ +
Sbjct: 159 YAMPVXRCAAFCLLLPFLI-LPTLASPQEQAREANPDYSFNALPTYNFKLKENGT----- 212
Query: 334 NSSSIGDGGVVAAGTEKERVISGEDAVC 361
G+ GV+AAGT+KER ISGEDAVC
Sbjct: 213 -----GESGVLAAGTDKERAISGEDAVC 235
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 102 LNSGLWISVELVLTLSQVVSAVVVLSVFR-HEHPRAPLFEWIVGYAAGCVATLPLLYWRY 160
SGLWIS++ +L++ Q+V+++VVLS+ + + LF W+VGYA GCV LPLLY RY
Sbjct: 36 FESGLWISLQFILSVIQIVASIVVLSLSKXNGDXDYKLFSWVVGYACGCVLMLPLLYCRY 95
>gi|359494331|ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
Length = 312
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 131/272 (48%), Gaps = 55/272 (20%)
Query: 67 SSRNPTSQ--PSTSVNGSNTRNVAFTRR-------GESRRRRSPLNSGLWISVELVLTLS 117
SSR P S T++ S R +F RR S +P NS W+ +E + +
Sbjct: 9 SSRAPPSSFLIRTAMRISRARWFSFLRRVFHYQNGSRSDLGANPFNSSTWMILEFIALVV 68
Query: 118 QVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYR-----QSNQVSEPDSV 172
Q+ LSV + E P P+ WIVGY GCV +L LLYWRY+ Q + S PD
Sbjct: 69 QIGVITFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIE 128
Query: 173 QSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMAL 232
Q RN+ E+ R+ SH L+ + +L
Sbjct: 129 QQRNN---------------------EESRS---SH---------------LMNKCRTSL 149
Query: 233 DCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPC 291
+ FFA+WFV+GNVW+F S AP L+ LCI LA + I Y+ PF+L +CCC+P
Sbjct: 150 ELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPL 209
Query: 292 IVSILGLREDLAQT-RGATAESIDALPTYKFK 322
+ ++LG ++ +GA+ + I LP+++FK
Sbjct: 210 VSNLLGYNMNMGSVDKGASDDQISRLPSWRFK 241
>gi|255635776|gb|ACU18237.1| unknown [Glycine max]
Length = 365
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 73/343 (21%)
Query: 35 DITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPST-----SVNGSNTRNVAF 89
+ ++ SS+++T DR + S +R P P + ++ S R F
Sbjct: 13 EYSMVPFSSNSATEDRVA------------SARNRPPRVTPPSFLVRIAMRISRARWFTF 60
Query: 90 TRR-------GESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWI 142
RR S +P NS W+ +E + + Q+ L++ + E P P+ W+
Sbjct: 61 LRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALILQITITTFTLAISKRERPIWPMRIWV 120
Query: 143 VGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHR 202
GY GCV L LLY RYRQ +++ DS+ S++E R
Sbjct: 121 SGYDIGCVLNLLLLYGRYRQI-YLTQGDSLS---------------------LSDIEQQR 158
Query: 203 APIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLY 261
+ T R L+ + +L+ FFA+WFV+GNVW+F S AP L+
Sbjct: 159 -------NNEET-----RMSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHHAPKLH 206
Query: 262 RLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYK 320
LCI+ LA + + Y+ PF+L +CCC+P I ++LG ++A + +GA+ + I LP+++
Sbjct: 207 VLCIILLAWNAMCYSFPFLLFVLLCCCVPLISTLLGYNMNMASSNKGASNDQISQLPSWR 266
Query: 321 FKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFC 363
K + + + G + G+EK +I+ + C C
Sbjct: 267 HK-----------EAGAKLELGNASEGSEK--LINEDPECCIC 296
>gi|29367395|gb|AAO72570.1| putative ATP synthetase alpha chain [Oryza sativa Japonica Group]
Length = 198
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVN 80
ME+ V+ EHIIDI S++++H D S+ + P Q ++V
Sbjct: 1 MEQTTGVSGHEHIIDIPRDSGPSTSTSHSVARENHGEPNPVDRSATRALVPALQAPSAVG 60
Query: 81 GSNTRNVAFTRRGES--RRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPL 138
+ + + RR ++ RR RSPLNSGLWIS+E+++ +SQ+V+A+VVLS+ R EHP+APL
Sbjct: 61 APSAGHTSGARRSDNYVRRHRSPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPL 120
Query: 139 FEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
FEW++GY GC ATLP LYWRY N V+
Sbjct: 121 FEWVIGYTVGCFATLPHLYWRYIHRNIVN 149
>gi|297844460|ref|XP_002890111.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
gi|297335953|gb|EFH66370.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 124/271 (45%), Gaps = 87/271 (32%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDR-------TSNGLDSTRHEDGSSGSSRNPTS 73
ME + +N EHII+IT D S S S+ D +S D ++G+S S+R S
Sbjct: 1 MESESDNDNDEHIIEITNDDGSLSGSSLDERSYSSLSSSVSTDDETSDEGASSSTRGCGS 60
Query: 74 QPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEH 133
LW ++ELV+TL Q+V+++VVL+V + EH
Sbjct: 61 --------------------------------LWNTMELVVTLVQIVASLVVLTVAKDEH 88
Query: 134 PRAPLFEWIVGYAAGCVA-TLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISV 192
+A L W++GY GC+A TL LL R+ N++ V SR
Sbjct: 89 LQALLLTWVIGYTCGCIANTLVLLLSCVRKYNRIG----VYSRT---------------- 128
Query: 193 PRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHS 252
R +++ KM ++CFF VW V+G +WI GHS
Sbjct: 129 ---------------------------RIDGVMDALKMGIECFFVVWLVLGILWICYGHS 161
Query: 253 SAADAPNLYRLCIVFLAISCIGYAMPFILCA 283
S +DAP LYRLC+VF+A SCI +A +LCA
Sbjct: 162 SPSDAPKLYRLCVVFIAFSCIRFAYAVLLCA 192
>gi|5002214|gb|AAD37364.1| unknown [Phacelia tanacetifolia]
Length = 74
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 66/73 (90%)
Query: 99 RSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYW 158
RSPLNSGLWISVELVLT+SQ+V+A+VVLS+ R+E+PRAPLF W+VGYA+GCVA LPLLYW
Sbjct: 1 RSPLNSGLWISVELVLTVSQIVAAIVVLSLSRNENPRAPLFAWVVGYASGCVAILPLLYW 60
Query: 159 RYRQSNQVSEPDS 171
RYR NQ SE DS
Sbjct: 61 RYRHRNQGSERDS 73
>gi|147815561|emb|CAN70532.1| hypothetical protein VITISV_010220 [Vitis vinifera]
Length = 232
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 111/232 (47%), Gaps = 56/232 (24%)
Query: 131 HEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSI 190
EH LF W++GYA+GC LPLLY RY + ++
Sbjct: 3 QEHRYPKLFPWVMGYASGCALMLPLLYSRYXIAR------------------------TL 38
Query: 191 SVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGG 250
++ + E E + +V +FKM L CFF VW V+G VWI G
Sbjct: 39 NLGSSEEAE--------------------KLFGVVRFFKMTLSCFFLVWLVLGIVWIPGA 78
Query: 251 -HSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGAT 309
S DA L LC+V C YA+P + A++C LPC++ L + RGAT
Sbjct: 79 LFSIRDDATLLETLCLVLFLSGCFVYAIPGMRFASLCLFLPCLICA-TLVSPHEKPRGAT 137
Query: 310 AESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVC 361
ESI+ LPTYKFK K+ N R G+GGV AAGT KER +S EDAVC
Sbjct: 138 PESINELPTYKFKSKE----NGR------GEGGVWAAGTIKERTLSEEDAVC 179
>gi|449463372|ref|XP_004149408.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 315
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 146/315 (46%), Gaps = 52/315 (16%)
Query: 56 DSTRHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRR-------GESRRRRSPLNSGLWI 108
D R+E + S P+ ++ S R F RR S +P NSG W+
Sbjct: 3 DDIRNE---ASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGSWM 59
Query: 109 SVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSE 168
++ELV L Q++ + L++ + E P P+ WI GY GCV +L LLY R+R
Sbjct: 60 AMELVALLFQLIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRY------ 113
Query: 169 PDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYF 228
+ R+ ++ S++E + Q T S R+ L+
Sbjct: 114 -HYLMQRDGNS---------------LSDIEHEQ---------QRTNE-SSRYSHLMNRC 147
Query: 229 KMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICC 287
+ +LD FFA+WFV+GN+W F +S AP L+ LC L + I Y+ PFIL +CC
Sbjct: 148 RTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCC 207
Query: 288 CLPCIVSILGLREDLAQT-RGATAESIDALPTYKFKLKKS----RSSNDRDNSSSIGDGG 342
C+P I S+ G + T +GA+ + I LP +++K ++ RS D N+ + +
Sbjct: 208 CVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKEDP 267
Query: 343 ----VVAAGTEKERV 353
+A +KE V
Sbjct: 268 ECCICLAKYIDKEEV 282
>gi|449496857|ref|XP_004160245.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial [Cucumis
sativus]
Length = 299
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 130/264 (49%), Gaps = 42/264 (15%)
Query: 100 SPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWR 159
+P NSG W+++ELV L Q++ + L++ + E P P+ WI GY GCV +L LLY R
Sbjct: 35 NPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGR 94
Query: 160 YRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSP 219
+R + R+ ++ S++E + Q T S
Sbjct: 95 HRY-------HYLMQRDGNS---------------LSDIEHEQ---------QRTNE-SS 122
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMP 278
R+ L+ + +LD FFA+WFV+GN+W F +S AP L+ LC L + I Y+ P
Sbjct: 123 RYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFP 182
Query: 279 FILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFKLKKS----RSSNDRD 333
FIL +CCC+P I S+ G + T +GA+ + I LP +++K ++ RS D
Sbjct: 183 FILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNS 242
Query: 334 NSSSIGDGG----VVAAGTEKERV 353
N+ + + +A +KE V
Sbjct: 243 NTGLLKEDPECCICLAKYIDKEEV 266
>gi|148908123|gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 127/266 (47%), Gaps = 23/266 (8%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++L+ LS VV +VV+L+ E P PL WI GYA C+ + + + Y + N+
Sbjct: 75 VMLDLLWNLSFVVVSVVILTSTLEERPTTPLRVWIAGYALQCLLHMIYVAYEYTRRNRQR 134
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
P SV S S ++ + V RAP + G Q T S K L
Sbjct: 135 SP-SVGSAGGSESASSAGEQVNSQV--------GRAPQEAETGRQETEERSSIAKRLESV 185
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLAIS----CIGYAMPFILC 282
M F W++VG W+ GG S A DAP LY LCIVFLA A+ ++
Sbjct: 186 NTM----FSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDVFFVAFCAAVACMIG 241
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI++IL +A GA+ I+ LP Y+F ++ S +N + S G
Sbjct: 242 IAVCCCLPCIIAIL---YAVANQDGASETEINLLPKYRFCRIGPSEKNNSEKSPSYGGVM 298
Query: 342 GVVAAGTEKERVISGEDA-VCFCWTA 366
++ + ERV+ EDA C C +A
Sbjct: 299 TLICGESTSERVLGAEDAECCICLSA 324
>gi|148910158|gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 127/266 (47%), Gaps = 23/266 (8%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++L+ LS VV +VV+L+ E P P+ WI GYA C+ + + + Y + N+
Sbjct: 75 VMLDLLWNLSFVVVSVVILTSTLEERPTTPMRVWIAGYALQCLLHMIYVAYEYTRRNRQR 134
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
P SV S S ++ + V RAP + G Q T S K L
Sbjct: 135 SP-SVGSAGGSESASSAGEQVNSQV--------GRAPQEAETGRQETEERSSIAKRLESV 185
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLAIS----CIGYAMPFILC 282
M F W++VG W+ GG S A DAP LY LCIVFLA A+ ++
Sbjct: 186 NTM----FSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDVFFVAFCAAVACMIG 241
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI++IL +A GA+ I+ LP Y+F ++ S +N + S G
Sbjct: 242 IAVCCCLPCIIAIL---YAVANQDGASETEINLLPKYRFCRIGPSEKNNSEKSPSYGGVM 298
Query: 342 GVVAAGTEKERVISGEDA-VCFCWTA 366
++ + ERV+ EDA C C +A
Sbjct: 299 TLICGESTSERVLGAEDAECCICLSA 324
>gi|449463394|ref|XP_004149419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 336
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 114/256 (44%), Gaps = 53/256 (20%)
Query: 82 SNTRNVAFTRR-------GESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHP 134
S R F RR S P NS W++VELV + Q+ V VL++ E P
Sbjct: 58 SRARWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKP 117
Query: 135 RAPLFEWIVGYAAGCVATLPLLYWRY-----RQSNQVSEPDSVQSRNSSARLNAPAAPFS 189
P+ WIVGY GC+ +L LLY RY +V D+ Q R S A
Sbjct: 118 IWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQAS--------- 168
Query: 190 ISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFG 249
R L+ + +L+ FFA+WFV+GNVWI
Sbjct: 169 ------------------------------RSLHLMNKCRTSLELFFAIWFVMGNVWIVD 198
Query: 250 GH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQT-RG 307
SS AP L+ LC+ L + I Y+ PFIL +CCC+P + S+LG +A T +
Sbjct: 199 SRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNISMASTDKA 258
Query: 308 ATAESIDALPTYKFKL 323
A + I LP +++K+
Sbjct: 259 ALDDQISQLPCWRYKV 274
>gi|224056493|ref|XP_002298883.1| predicted protein [Populus trichocarpa]
gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 148/306 (48%), Gaps = 51/306 (16%)
Query: 67 SSRNPTSQ--PSTSVNGSNTRNVAFTRR-------GESRRRRSPLNSGLWISVELVLTLS 117
S+R PTS T++ S R F RR S +P NS W+ +E V +
Sbjct: 35 SARTPTSSLLVRTAMRISRARWFTFLRRVFHYQNGSRSNLGSNPFNSSPWMMLEFVALVI 94
Query: 118 QVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNS 177
Q+ + L++ + E P P+ WI+GY GCV +L LLY RYRQ N
Sbjct: 95 QISITMFTLAISKAEKPVWPVRIWIIGYNIGCVLSLLLLYGRYRQIN------------- 141
Query: 178 SARLNAPAAPFSISVPRTSEVEDHRAP-IASHRGGQNTGVLSPRFKVLVEYFKMALDCFF 236
T++ + P + RG + + V R +L+ + +L+ FF
Sbjct: 142 -----------------TTQADGFGLPDLEQQRGSEESSVC--RCSILMHKCRTSLELFF 182
Query: 237 AVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSI 295
A+WFV+GNVW+F S AP L+ LCI LA + + Y+ PF+L +CCC+P I ++
Sbjct: 183 AIWFVMGNVWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTV 242
Query: 296 LGLREDLAQT-RGATAESIDALPTYKFKLKKSRSS--NDRDNSSSIGDGGV-----VAAG 347
LG ++ RGA+ + I +LP++++K + S N+ D +S+I + +A
Sbjct: 243 LGYNMNMGSAERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIASEDLECCICLAKY 302
Query: 348 TEKERV 353
+KE V
Sbjct: 303 KDKEEV 308
>gi|297793071|ref|XP_002864420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310255|gb|EFH40679.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 47/308 (15%)
Query: 60 HEDGSSGSSRNPTS-QPSTSVNGSNTRNVAFTRR-------GESRRRRSPLNSGLWISVE 111
H + R+P+S ++ S R F RR S +P NS W+ E
Sbjct: 36 HAADGNAQERSPSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSE 95
Query: 112 LVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDS 171
L+ L Q+ L++ + E P P+ WI GY GC+ L LLY RYRQ +
Sbjct: 96 LIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDVYQGNGF 155
Query: 172 VQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMA 231
V +VE + RG + T R L+ + +
Sbjct: 156 V----------------------LGDVEQQQ------RGREET-----RSSHLMNKCRTS 182
Query: 232 LDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLP 290
L+ FFA+WFV+GNVW+F S AP L+ LC+ L+ + I Y+ PF+L +CC +P
Sbjct: 183 LELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLSWNAICYSFPFLLFLFLCCLVP 242
Query: 291 CIVSILGLREDLAQT-RGATAESIDALPTYKFK-LKKSRSSNDRDNSSSIGDGG---VVA 345
I S+LG ++ + R A+ + I +LP++KFK + ++ S +D D++++ D +A
Sbjct: 243 LISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRIDENASDSDSDSATATDDPECCICLA 302
Query: 346 AGTEKERV 353
+KE V
Sbjct: 303 KYKDKEEV 310
>gi|9758617|dbj|BAB09279.1| unnamed protein product [Arabidopsis thaliana]
Length = 320
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 128/273 (46%), Gaps = 43/273 (15%)
Query: 60 HEDGSSGSSRNPTS-QPSTSVNGSNTRNVAFTRR-------GESRRRRSPLNSGLWISVE 111
H ++G R+P+S ++ S R F RR S +P NS W+ E
Sbjct: 36 HVAAANGQERSPSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSE 95
Query: 112 LVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDS 171
L+ L Q+ L++ + E P P+ WI GY GC+ L LLY RYRQ +
Sbjct: 96 LIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLD------- 148
Query: 172 VQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMA 231
+ N +VE + RG + T R L+ + +
Sbjct: 149 INQGNGFV---------------LGDVEQQQ------RGREET-----RSSHLMNKCRTS 182
Query: 232 LDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLP 290
L+ FFA+WFV+GNVW+F S AP L+ LC+ LA + I Y+ PF+L +CC +P
Sbjct: 183 LELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCCLVP 242
Query: 291 CIVSILGLREDLAQT-RGATAESIDALPTYKFK 322
I S+LG ++ + R A+ + I +LP++KFK
Sbjct: 243 LISSLLGYNMNMGSSDRAASDDQISSLPSWKFK 275
>gi|18423810|ref|NP_568834.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30696669|ref|NP_851197.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|21553392|gb|AAM62485.1| unknown [Arabidopsis thaliana]
gi|332009321|gb|AED96704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332009322|gb|AED96705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 343
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 128/273 (46%), Gaps = 43/273 (15%)
Query: 60 HEDGSSGSSRNPTS-QPSTSVNGSNTRNVAFTRR-------GESRRRRSPLNSGLWISVE 111
H ++G R+P+S ++ S R F RR S +P NS W+ E
Sbjct: 36 HVAAANGQERSPSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSE 95
Query: 112 LVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDS 171
L+ L Q+ L++ + E P P+ WI GY GC+ L LLY RYRQ +
Sbjct: 96 LIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLD------- 148
Query: 172 VQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMA 231
+ N +VE + RG + T R L+ + +
Sbjct: 149 INQGNGFV---------------LGDVEQQQ------RGREET-----RSSHLMNKCRTS 182
Query: 232 LDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLP 290
L+ FFA+WFV+GNVW+F S AP L+ LC+ LA + I Y+ PF+L +CC +P
Sbjct: 183 LELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCCLVP 242
Query: 291 CIVSILGLREDLAQT-RGATAESIDALPTYKFK 322
I S+LG ++ + R A+ + I +LP++KFK
Sbjct: 243 LISSLLGYNMNMGSSDRAASDDQISSLPSWKFK 275
>gi|4938496|emb|CAB43854.1| putative protein [Arabidopsis thaliana]
gi|7269510|emb|CAB79513.1| putative protein [Arabidopsis thaliana]
Length = 464
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 120/238 (50%), Gaps = 34/238 (14%)
Query: 100 SPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWR 159
+P NS W+ EL+ L Q+ L++ ++E P P+ WI GY GC+ L LLY R
Sbjct: 209 NPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGR 268
Query: 160 YRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSP 219
YRQ + E NA FS ++E + R + T
Sbjct: 269 YRQQDTSHE-------------NA----FSFG-----DIEQQQ------RSREETT---- 296
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMP 278
R L+ + +L+ FFA+WFV+GNVW+F S AP L+ LCI LA + + Y+ P
Sbjct: 297 RCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFP 356
Query: 279 FILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFKLKKSRSSNDRDNS 335
F+L +CC +P + S LG ++ + +GA+ + I +LP++K+KL S + + N+
Sbjct: 357 FLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANN 414
>gi|145345425|ref|NP_194388.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186942|ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|110743905|dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana]
gi|332659822|gb|AEE85222.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659823|gb|AEE85223.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 335
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 120/238 (50%), Gaps = 34/238 (14%)
Query: 100 SPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWR 159
+P NS W+ EL+ L Q+ L++ ++E P P+ WI GY GC+ L LLY R
Sbjct: 80 NPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGR 139
Query: 160 YRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSP 219
YRQ + E NA FS ++E + R + T
Sbjct: 140 YRQQDTSHE-------------NA----FSFG-----DIEQQQ------RSREETT---- 167
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMP 278
R L+ + +L+ FFA+WFV+GNVW+F S AP L+ LCI LA + + Y+ P
Sbjct: 168 RCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFP 227
Query: 279 FILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFKLKKSRSSNDRDNS 335
F+L +CC +P + S LG ++ + +GA+ + I +LP++K+KL S + + N+
Sbjct: 228 FLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANN 285
>gi|125527404|gb|EAY75518.1| hypothetical protein OsI_03422 [Oryza sativa Indica Group]
Length = 304
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 132/285 (46%), Gaps = 59/285 (20%)
Query: 75 PSTSVNGSNTRNVAFTRRGESRRRRS-----------------------PLNSGLWISVE 111
PS+S R AFT R +R R+ P NS W+++E
Sbjct: 4 PSSSATPGTGRVSAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSSGWLALE 63
Query: 112 LVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDS 171
L + ++Q+V V++ E P PL W+ Y G V +LPLLYWR+R S+ + +
Sbjct: 64 LGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRHSSSGARGGT 123
Query: 172 VQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMA 231
+ + + E H G N + + + L+ +
Sbjct: 124 L----------------------SDDPEMH---------GANDPLRNRSY--LMNKARAF 150
Query: 232 LDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLP 290
L+ FFA+WFV+GNVW+F S AP LY LCI LA + + Y++PF+L +CC +P
Sbjct: 151 LELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVP 210
Query: 291 CIVSILGLREDLAQT-RGATAESIDALPTYKFKLKKSRSSNDRDN 334
+ LG + A RGA+ E + ALP ++FK + + + DRD+
Sbjct: 211 AVGYALGYNMNSASVGRGASDEQLAALPQWRFK-EPADAPRDRDH 254
>gi|20804599|dbj|BAB92290.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|125571727|gb|EAZ13242.1| hypothetical protein OsJ_03165 [Oryza sativa Japonica Group]
gi|215712224|dbj|BAG94351.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 132/285 (46%), Gaps = 59/285 (20%)
Query: 75 PSTSVNGSNTRNVAFTRRGESRRRRS-----------------------PLNSGLWISVE 111
PS+S R AFT R +R R+ P NS W+++E
Sbjct: 4 PSSSATPGTGRVSAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSPGWLALE 63
Query: 112 LVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDS 171
L + ++Q+V V++ E P PL W+ Y G V +LPLLYWR+R S+ + +
Sbjct: 64 LGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRHSSSGARGGT 123
Query: 172 VQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMA 231
+ + + E H G N + + + L+ +
Sbjct: 124 L----------------------SDDPEMH---------GANDPLRNRSY--LMNKARAF 150
Query: 232 LDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLP 290
L+ FFA+WFV+GNVW+F S AP LY LCI LA + + Y++PF+L +CC +P
Sbjct: 151 LELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVP 210
Query: 291 CIVSILGLREDLAQT-RGATAESIDALPTYKFKLKKSRSSNDRDN 334
+ LG + A RGA+ E + ALP ++FK + + + DRD+
Sbjct: 211 AVGYALGYNMNSASVGRGASDEQLAALPQWRFK-EPADAPRDRDH 254
>gi|255563598|ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis]
Length = 323
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 124/259 (47%), Gaps = 36/259 (13%)
Query: 66 GSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVV 125
G +R P S + S R + S +P NS W+ +E + L Q+
Sbjct: 28 GENRGPVSIRTRSXVPFLRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALLVQISMTTFT 87
Query: 126 LSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPA 185
L + + E P P+ WIVGY GC+ +L L+Y RYRQ + V + DS
Sbjct: 88 LVISKMEKPIWPMRIWIVGYDIGCLLSLLLVYGRYRQVH-VVQGDS-------------- 132
Query: 186 APFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNV 245
F +S + RG +++ R L+ + +L+ FFA+WFV+GNV
Sbjct: 133 --FGLS------------DLEQQRGSEDS-----RCTHLMNKCRTSLELFFAIWFVMGNV 173
Query: 246 WIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQ 304
W+F S AP L+ LCI LA + + Y+ PF+L +CCC+P I S+LG +
Sbjct: 174 WVFDSRFGSFNRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMQMGS 233
Query: 305 T-RGATAESIDALPTYKFK 322
RGA+ + I LP++K+K
Sbjct: 234 AERGASDDQISRLPSWKYK 252
>gi|326505908|dbj|BAJ91193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 42/239 (17%)
Query: 100 SPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWR 159
+P NS W+++EL + ++Q++ V++ E P PL W+ Y G V +LPLLYWR
Sbjct: 473 NPFNSPGWLALELGVIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWR 532
Query: 160 YRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSP 219
++ S ++ R + E H A A
Sbjct: 533 HQHS--------------------------LAARRGDDPEMHGAGDALRDSS-------- 558
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMP 278
L+ + L+ FFA+WFV+GNVW+F S AP LY LCI LA + + Y++P
Sbjct: 559 ---YLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLAWNAVVYSLP 615
Query: 279 FILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFK---LKKSRSSNDRD 333
F+L +CC +P + LG + A RGA+ E +DALP ++FK + + R +D++
Sbjct: 616 FLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDALPRWRFKEPDVPRDREKDDQE 674
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 65/291 (22%)
Query: 71 PTSQPSTSVNGSNTRNVAFTRRGESRRRRS-----------------------PLNSGLW 107
P+S +T+ +R AFT R +R R+ P NS W
Sbjct: 22 PSSSAATTPPAGTSRASAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSPGW 81
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+++EL + ++Q++ VV+ E P PL W+ Y G V +LPLL+WR+R S+
Sbjct: 82 LALELGVIVAQMLITTVVVVSSPKERPAWPLRLWVAAYNVGNVLSLPLLFWRHRHSSAAG 141
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
D + +S L +N+ L + + +E
Sbjct: 142 RGDDPEMHGASDAL------------------------------RNSSYLMNKARAFLE- 170
Query: 228 FKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATIC 286
FFA+WFV+GNVW+F S AP LY LCI L+ + I Y++PF+L +C
Sbjct: 171 ------LFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLSWNAIVYSLPFLLFLLLC 224
Query: 287 CCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFK---LKKSRSSNDRD 333
C +P + LG + A RGA+ E + ALP ++FK + + R +D++
Sbjct: 225 CFVPVVGYALGYNMNSASIGRGASDEQLAALPRWRFKEPDVPRDREHDDQE 275
>gi|255541482|ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223548985|gb|EEF50474.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 125/270 (46%), Gaps = 39/270 (14%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
I ++++ L+ V VVVL + E P+ PL WI+GY+ C+ + + + Y++
Sbjct: 84 IFLDVLWNLAFVGIGVVVLGLSVKEEPQLPLRVWIIGYSLQCLFHIGCVIFEYKR----- 138
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
+ +SARL A S SV S+ D RG +V+
Sbjct: 139 -----RLFGTSARLEASD---STSVSE-SDGGDSVDDGVEQRGNDGD-------TCVVKQ 182
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA------ISCIGYAMPFI 280
+ A F +W++VG W+ GG + D+P LY LCI FLA I CI A +
Sbjct: 183 LESANTMFSFIWWIVGFYWVTAGGQNLTNDSPQLYWLCITFLAFDVIFVIICIAVAC--L 240
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ ICCCLPCI+ IL D GAT E I+ LP YKF+ + D ++
Sbjct: 241 IGLAICCCLPCIIGILYAMTD---REGATQEEIEQLPMYKFRRIGDFEKVNADFQATF-- 295
Query: 341 GGVVAA---GTEKERVISGEDA-VCFCWTA 366
GG++ T ER +S EDA C C +A
Sbjct: 296 GGMMTECEIDTPTERRLSHEDAECCICLSA 325
>gi|194693834|gb|ACF81001.1| unknown [Zea mays]
Length = 156
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 7/101 (6%)
Query: 277 MPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSS 336
MPFILCA ICCCLPCI+S++G REDL + RGAT+++I+AL TY+F+ KK R+ +
Sbjct: 1 MPFILCALICCCLPCIISLMGFREDLDENRGATSDAINALGTYRFRSKKPRNG-----EA 55
Query: 337 SIGDGGVVAAGTEKERVISGEDAVCFCWTAGF--NHEFRYL 375
+ G GGV A GT+KER +S EDAVC A + N + R L
Sbjct: 56 NEGGGGVFAPGTDKERAVSAEDAVCCICLARYVDNDDLRLL 96
>gi|326505186|dbj|BAK02980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 42/239 (17%)
Query: 100 SPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWR 159
+P NS W+++EL + ++Q++ V++ E P PL W+ Y G V +LPLLYWR
Sbjct: 58 NPFNSPGWLALELGVIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWR 117
Query: 160 YRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSP 219
++ S ++ R + E H A A
Sbjct: 118 HQHS--------------------------LAARRGDDPEMHGAGDALRDS--------- 142
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMP 278
L+ + L+ FFA+WFV+GNVW+F S AP LY LCI LA + + Y++P
Sbjct: 143 --SYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLAWNAVVYSLP 200
Query: 279 FILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFK---LKKSRSSNDRD 333
F+L +CC +P + LG + A RGA+ E +DALP ++FK + + R +D++
Sbjct: 201 FLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDALPRWRFKEPDVPRDREKDDQE 259
>gi|225453718|ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 382
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 128/319 (40%), Gaps = 43/319 (13%)
Query: 66 GSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVV 125
SSR +PS V + + R+ S + +++V L+ VV A+ V
Sbjct: 48 ASSRRIMREPSMRVRETAAEQL-------EERQSDWAYSKPIVILDIVWNLAFVVVAMTV 100
Query: 126 LSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNA-- 183
L + R E P PL WI+GY CV + + Y++ ++ +++ +
Sbjct: 101 LVMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSS 160
Query: 184 -----PAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAV 238
P V + ED + +A H NT F +
Sbjct: 161 SSGSDEGDPIDYRVEVRNRDEDETS-VAKHLESANTM-------------------FSFI 200
Query: 239 WFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCA----TICCCLPCIV 293
W+++G W+ GG D+P LY LCIVFLA + + +CCCLPCI+
Sbjct: 201 WWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCII 260
Query: 294 SILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSSIGDGGVVAAGTEKER 352
+IL +A GAT E I+ LP YKF ++ +S N S G T E
Sbjct: 261 AIL---YTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEH 317
Query: 353 VISGEDAVCFCWTAGFNHE 371
VI EDA C + + E
Sbjct: 318 VIPQEDAECCICLSAYEDE 336
>gi|296089059|emb|CBI38762.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 36/277 (12%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ +++V L+ VV A+ VL + R E P PL WI+GY CV + + Y++ ++
Sbjct: 30 VILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRRRRLV 89
Query: 168 EPDSVQSRNSSARLNA-------PAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPR 220
+++ + P V + ED + +A H NT
Sbjct: 90 SSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVRNRDEDETS-VAKHLESANTM----- 143
Query: 221 FKVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAMPF 279
F +W+++G W+ GG D+P LY LCIVFLA +
Sbjct: 144 --------------FSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICV 189
Query: 280 ILCA----TICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDN 334
+ +CCCLPCI++IL +A GAT E I+ LP YKF ++ +S N
Sbjct: 190 AVACVIGIAVCCCLPCIIAIL---YTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQ 246
Query: 335 SSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGFNHE 371
S G T E VI EDA C + + E
Sbjct: 247 ESFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDE 283
>gi|224114523|ref|XP_002316784.1| predicted protein [Populus trichocarpa]
gi|222859849|gb|EEE97396.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 33/225 (14%)
Query: 100 SPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWR 159
+P NS W+ +E V L Q+ L++ + E+P P+ WI+GY GCV +L LLY R
Sbjct: 29 NPFNSSSWMMLEFVALLLQICITTFTLAISKAENPVWPVRIWIIGYNIGCVLSLLLLYGR 88
Query: 160 YRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSP 219
YRQ N ++ + P +GG +
Sbjct: 89 YRQLN------------------------------ATQGDGFGLPDLEQQGGSEESSVC- 117
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMP 278
R+ L+ + +L+ FFA+WFV+GNVW+F S AP L+ LCI LA + + Y+ P
Sbjct: 118 RYSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSYFRAPKLHVLCISLLAWNALSYSFP 177
Query: 279 FILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFK 322
F+L +CCC+P I +++G + RGA+ + I LP+ ++K
Sbjct: 178 FLLFLLLCCCVPLISTVIGYNMSMGSAERGASDDQISRLPSRRYK 222
>gi|449460475|ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 40/273 (14%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQV- 166
+ +++V + VV A +L + R+E P PL WIVGYA C+ + + YR+ Q+
Sbjct: 88 VILDIVWNFAFVVVAATILVLSRNESPSMPLRLWIVGYAFQCILHMVCVCVEYRRRRQLR 147
Query: 167 -SEPDSVQSRNSSARLNAPAAPFSIS-VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVL 224
S S++ NS+ ++ + + S ++++++ + +A H NT
Sbjct: 148 YSAFSSMEEGNSARSISGLGSRANSSHYVSLAQLDENDSSVAKHLESANTM--------- 198
Query: 225 VEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPF 279
F +W+++G W+ GG S A +P LY LCI+FL A+
Sbjct: 199 ----------FSFIWWIIGFYWVSAGGQSLAQASPLLYWLCIIFLGFDVFFVVFCVALAC 248
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIG 339
I+ +CCCLPCI+++L +A GAT E ++ L +KF+ + N S+ +
Sbjct: 249 IIGIAVCCCLPCIIALL---YAVADQEGATKEDVEQLSKFKFR----KVENTEKFSTDVQ 301
Query: 340 D--GGVVA---AGTEKERVISGEDA-VCFCWTA 366
+ GGV++ + ER + EDA C C +A
Sbjct: 302 EPLGGVMSECCTDSPIERPLLQEDAECCICLSA 334
>gi|297799346|ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 39/239 (16%)
Query: 100 SPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWR 159
+P NS W+ EL+ L Q+ L++ + E P P+ WI GY GC+ L LLY R
Sbjct: 80 NPFNSITWMISELIALLVQITVITSTLALSKKERPVWPMRLWITGYNVGCLLNLMLLYGR 139
Query: 160 YRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSP 219
YRQ + +++ NA + I + + S E R SH
Sbjct: 140 YRQQH-------------TSQGNAFSFG-DIELQQRSREETTRC---SH----------- 171
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMP 278
L+ + +L+ FFA+WFV+GNVW+F S AP L+ LCI LA + + Y+ P
Sbjct: 172 ----LMNRCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFP 227
Query: 279 FILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFKL-----KKSRSSND 331
F+L +CC +P + S LG ++ + +GA+ + I +LP++K+KL +++SND
Sbjct: 228 FLLFLLLCCVVPLLSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLIDEASDSAQASND 286
>gi|224130104|ref|XP_002320753.1| predicted protein [Populus trichocarpa]
gi|222861526|gb|EEE99068.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 125/296 (42%), Gaps = 59/296 (19%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++++ L+ V+ AV VL + E P+ PL WIVGY C+ + + YR+ +
Sbjct: 31 VLIDVLRNLAFVIIAVGVLGLSLEEKPKVPLRVWIVGYGLQCLCHVVCVVVEYRKRRNLG 90
Query: 168 -EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
E + S S L +HR G N G + R VE
Sbjct: 91 FEESGILSSGSGDSLG----------------------FGTHRSG-NDGEDTSRVPKRVE 127
Query: 227 YFKMALDCFFAVWFVVGNVWI--FGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCA- 283
+ +W+V+G W+ G ++P LY LC+ FLA A+ I+CA
Sbjct: 128 SASTMVS---VIWWVIGFYWVTAAGRQDLEENSPQLYWLCVTFLAFD----ALFVIICAA 180
Query: 284 -------TICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSS 336
+CCCLPCI+ IL D GATAE ID LP YKF ++ D +N
Sbjct: 181 AACLIGIAVCCCLPCIIGILYAMTD--PQEGATAEEIDRLPKYKFCRAEAFEKVDGENPE 238
Query: 337 SIGDGGVVAA---GTEKERVISGEDA-VCFCWTA----------GFNHEFRYLVID 378
GG++ T ER +S EDA C C +A NH F + ID
Sbjct: 239 IC--GGMMTECDNDTPIERAVSHEDAECCICLSAYENGSELRELPCNHHFHCMCID 292
>gi|357481703|ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|388506770|gb|AFK41451.1| unknown [Medicago truncatula]
Length = 387
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 41/271 (15%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRY------- 160
+ +++V + V+ A L + R+E P PL WI GY CV + + + Y
Sbjct: 86 VILDIVWNFAFVIVAGTALFLSRNEAPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRRFQ 145
Query: 161 --RQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLS 218
SN V+ D + S N S+R + +A S ++ ++ +A H NT
Sbjct: 146 RSSSSNAVAGSDRIGSGNFSSREGSRSAVSGSSYVSLAQFDEESTSVAKHLESANTM--- 202
Query: 219 PRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCI 273
F +W+++G W+ GG + A D+P LY LCI +
Sbjct: 203 ----------------FSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIVFLGFDVFFVVF 246
Query: 274 GYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRD 333
A+ ++ +CCCLPCI+++L +A GA+ E I+ L +KF+ +S +
Sbjct: 247 CVALACVIGIAVCCCLPCIIALL---YAVADQEGASKEDIEQLSKFKFRKVESNEKQTDN 303
Query: 334 NSSSIGDGGVVA---AGTEKERVISGEDAVC 361
N + GG++ A + E V++ EDA C
Sbjct: 304 NQGPV--GGIMTECRADSPIEHVLAEEDAEC 332
>gi|297838553|ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
gi|297332999|gb|EFH63417.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 49/264 (18%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++++ + VV A+V+L VF+ E P P+ WI GYA C+ + L++ +R+ N +
Sbjct: 69 VALDMLWNTAFVVVAIVMLLVFKEEKPNVPIRVWICGYAIQCLVHVVLVWLEFRKRNART 128
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
+++ S SE ED+ I S + ++ ++ +
Sbjct: 129 RTGDLEAAQGSGN-------------HDSEDEDNDERILSTKTCES-------MNTIISF 168
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFI 280
+W++ G W+ GG +A +LY L +FL AI C+ + +
Sbjct: 169 ----------IWWIAGFYWLVSGGDILLQNATHLYWLTFIFLAFDVFFAIFCV--VLACL 216
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI+++L +A GA+ + LP Y+F+ +ND S G
Sbjct: 217 IGIALCCCLPCIIALL---YAVAGQEGASEADLSILPKYRFQ----ALNNDEKQSDGGGK 269
Query: 341 GGVVAAGTE---KERVISGEDAVC 361
V AG+E KERV+ EDA C
Sbjct: 270 MIPVEAGSENMGKERVLLPEDADC 293
>gi|414880831|tpg|DAA57962.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 469
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 120/245 (48%), Gaps = 38/245 (15%)
Query: 100 SPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWR 159
+P NS W+++EL + ++QVV V++ E P PL W+ Y G V +LPLLYWR
Sbjct: 178 NPFNSPGWLALELGVIVAQVVLTTAVVATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWR 237
Query: 160 YRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSP 219
+R S+ S ++E H G N +
Sbjct: 238 HRHSSSSSSAGGG----------------------RGDLEMH---------GANDAPGNR 266
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMP 278
+ L+ + L+ FFA+WFV+GNVW+F S AP LY LC+ LA + + Y++P
Sbjct: 267 SY--LMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRAPRLYALCVSLLAWNAVVYSLP 324
Query: 279 FILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFK---LKKSRSSNDRDN 334
F+L +CC +P + LG + A RGA+ E + ALP ++FK + + R +D+D
Sbjct: 325 FLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALPRWRFKEPDVARDRERDDQDI 384
Query: 335 SSSIG 339
SS G
Sbjct: 385 LSSRG 389
>gi|225453720|ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 365
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 126/312 (40%), Gaps = 46/312 (14%)
Query: 66 GSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVV 125
SSR +PS V + + R+ S + +++V L+ VV A+ V
Sbjct: 48 ASSRRIMREPSMRVRETAAEQL-------EERQSDWAYSKPIVILDIVWNLAFVVVAMTV 100
Query: 126 LSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPA 185
L + R E P PL WI+GY CV + + Y++ ++ +++ + +
Sbjct: 101 LVMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSS 160
Query: 186 APFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNV 245
+ + S +A H NT F +W+++G
Sbjct: 161 SSGNFS-----------CSVAKHLESANTM-------------------FSFIWWIIGFY 190
Query: 246 WI-FGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCA----TICCCLPCIVSILGLRE 300
W+ GG D+P LY LCIVFLA + + +CCCLPCI++IL
Sbjct: 191 WVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAIL---Y 247
Query: 301 DLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDA 359
+A GAT E I+ LP YKF ++ +S N S G T E VI EDA
Sbjct: 248 TVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQEDA 307
Query: 360 VCFCWTAGFNHE 371
C + + E
Sbjct: 308 ECCICLSAYEDE 319
>gi|186478525|ref|NP_173012.2| uncharacterized protein [Arabidopsis thaliana]
gi|334182600|ref|NP_001185004.1| uncharacterized protein [Arabidopsis thaliana]
gi|98961653|gb|ABF59156.1| hypothetical protein At1g15590 [Arabidopsis thaliana]
gi|332191217|gb|AEE29338.1| uncharacterized protein [Arabidopsis thaliana]
gi|332191218|gb|AEE29339.1| uncharacterized protein [Arabidopsis thaliana]
Length = 179
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 108/252 (42%), Gaps = 87/252 (34%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTHDRTS-------NGLDSTRHEDGSSGSSRNPTS 73
M+ + +N +HIIDIT + SSS S+ D S D ++G+S S+R+ S
Sbjct: 1 MDSESHSDNDDHIIDITNDEDSSSRSSLDERSYPSLSSSLSTDDESSDEGASSSTRDCGS 60
Query: 74 QPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEH 133
LW +ELV+TL Q+V++++VL++ + EH
Sbjct: 61 --------------------------------LWNIMELVVTLVQIVASLIVLTLAKDEH 88
Query: 134 PRAPLFEWIVGYAAGCVA-TLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISV 192
+A L W++GY GC+ TL +L R+ N++ V S+ + R
Sbjct: 89 QQALLLTWVIGYTCGCITITLLILLSCVRKYNRI----GVYSKTRTDR------------ 132
Query: 193 PRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHS 252
+++ KM +CFF VW V+G +WI GHS
Sbjct: 133 -------------------------------VMDALKMGNECFFVVWLVMGILWICYGHS 161
Query: 253 SAADAPNLYRLC 264
S++D P LYR C
Sbjct: 162 SSSDTPKLYRFC 173
>gi|224286153|gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 102/238 (42%), Gaps = 15/238 (6%)
Query: 130 RHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFS 189
RHE+P P+ W+VGYA C+ + + + YR+ + ++ S S N +
Sbjct: 114 RHENPNMPVRVWVVGYALQCLLHMICVCFEYRRRHSNAQQQRSNSGGQSGHTNNNNNSAN 173
Query: 190 ISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-F 248
P + D + VLS + + + A F +W++VG WI
Sbjct: 174 QQSPGEQQESDDAT------DEEVDEVLSTERTSIAKRLESANTMFSFIWWIVGFYWISA 227
Query: 249 GGHSSAADAPNLYRLC----IVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQ 304
GG DAP LY LC + A+ ++ +CCCLPCI++IL +A
Sbjct: 228 GGQILTHDAPQLYWLCVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYA---VAD 284
Query: 305 TRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAG-TEKERVISGEDAVC 361
GA+ E I LP YKFK + S G + G + ERV+S EDA C
Sbjct: 285 QEGASEEDIGLLPKYKFKSIGGSEKISGEKSGPFGGIMNLCTGESSTERVLSAEDAEC 342
>gi|15220639|ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
gi|12324089|gb|AAG52017.1|AC012563_27 putative RING zinc finger protein; 27623-28978 [Arabidopsis
thaliana]
gi|90093276|gb|ABD85151.1| At1g68070 [Arabidopsis thaliana]
gi|332196622|gb|AEE34743.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
Length = 343
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 137/314 (43%), Gaps = 66/314 (21%)
Query: 70 NPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGL------W------ISVELVLTLS 117
+P QP +V N A RRG S R L W ++++++ +
Sbjct: 23 SPRRQPVIAV----LLNRASGRRGASMVVRETAAQELEERRADWGYSKPVVALDMLWNTA 78
Query: 118 QVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNS 177
V+ A+V+L VF+ E P P+ WI GYA C+ + L++ +R+ N S P +++ +
Sbjct: 79 FVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNARSRPGDLEAAQA 138
Query: 178 SARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFA 237
+ + SE ED+ S + ++ ++ +
Sbjct: 139 TN--------------QDSEDEDNDERFLSTKTCES-------MNTIISF---------- 167
Query: 238 VWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFILCATICCCLP 290
VW++VG W+ GG +A +LY L VFL AI C+ A ++ +CCCLP
Sbjct: 168 VWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLAC--LIGIALCCCLP 225
Query: 291 CIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTE- 349
CI+++L +A GA+ + LP Y+F +ND S G V A +E
Sbjct: 226 CIIALL---YAVAGQEGASEADLSILPKYRFH----TMNNDEKQSDGGGKMIPVDAASEN 278
Query: 350 --KERVISGEDAVC 361
ERV+ EDA C
Sbjct: 279 LGNERVLLPEDADC 292
>gi|21536719|gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 343
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 137/314 (43%), Gaps = 66/314 (21%)
Query: 70 NPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGL------W------ISVELVLTLS 117
+P QP +V N A RRG S R L W ++++++ +
Sbjct: 23 SPRRQPVIAV----LLNRASGRRGASMVVRETAAQELEERRADWGYSKPVVALDMLWNTA 78
Query: 118 QVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNS 177
V+ A+V+L VF+ E P P+ WI GYA C+ + L++ +R+ N S P +++ +
Sbjct: 79 FVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNARSRPGDLEAAQA 138
Query: 178 SARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFA 237
+ + SE ED+ S + ++ ++ +
Sbjct: 139 TN--------------QDSEDEDNDERFLSTKTCES-------MNTIISF---------- 167
Query: 238 VWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFILCATICCCLP 290
VW++VG W+ GG +A +LY L VFL AI C+ A ++ +CCCLP
Sbjct: 168 VWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLAC--LIGIALCCCLP 225
Query: 291 CIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTE- 349
CI+++L +A GA+ + LP Y+F +ND S G V A +E
Sbjct: 226 CIIALL---YAVAGQEGASEADLSILPKYRFH----TMNNDEKQSDGGGKMIPVDAASEN 278
Query: 350 --KERVISGEDAVC 361
ERV+ EDA C
Sbjct: 279 LGNERVLLPEDADC 292
>gi|224063987|ref|XP_002301335.1| predicted protein [Populus trichocarpa]
gi|222843061|gb|EEE80608.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 118/270 (43%), Gaps = 43/270 (15%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++++ +L+ V+ AV VL + E PR P WIV Y C + + YR+ +
Sbjct: 91 VVIDVLWSLAIVIIAVGVLGLSLEEKPRVPFRAWIVAYILLCSCHVVCVVVEYRKRRNLG 150
Query: 168 EPDS-VQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
+S + S +S L+ FS S GQNT V +
Sbjct: 151 LRESGILSSDSGDSLD-----FSTQ--------------QSENDGQNTSV--------AK 183
Query: 227 YFKMALDCFFAVWFVVGNVWI--FGGHSSAADAPNLYRLCIVFLA------ISCIGYAMP 278
+ A+ F +W+++G W+ G + A D+P LY LCI FLA I CI A
Sbjct: 184 RVESAMTTFSIIWWIIGFYWVTTAGRQNVAKDSPQLYWLCIAFLAADTLFVIICIAVAC- 242
Query: 279 FILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSS 337
++ +CC LPCI+ IL +A GAT E ID L YKF ++ ND S
Sbjct: 243 -LIGIAVCCFLPCIIGIL---YAMADQEGATKEEIDRLLKYKFHRIGNCEKVNDESQESF 298
Query: 338 IGDGGVVAAGTEKERVISGEDA-VCFCWTA 366
G T ER +S ED C C +A
Sbjct: 299 GGMMTECDTDTPIERALSREDTECCICLSA 328
>gi|297817430|ref|XP_002876598.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
gi|297322436|gb|EFH52857.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
Length = 377
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 34/266 (12%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
I ++++ V+ ++ +L E P PL WI+GY C+ + + Y++ + +
Sbjct: 85 IVLDILWNFVFVIVSIAILGFSSEEDPDVPLRLWIIGYNFQCLLHVGCVIAEYKRRREAN 144
Query: 168 EPDSVQ-SRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
P S + S N + + S+ T +DH H NT
Sbjct: 145 SPPSGEDSSNHESLSGSDDESDGYSINDTD--DDHGTSFTKHLESANT------------ 190
Query: 227 YFKMALDCFFAVWFVVGNVWIFGGHSSAAD-APNLYRLCIVFLAIS----CIGYAMPFIL 281
F VW+++G W+ + A +P LY LC+ FLA I A+ ++
Sbjct: 191 -------MFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLI 243
Query: 282 CATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFK-LKKSRSSNDRDNSSSIGD 340
+CCCLPCI++IL LA GA E I+ L +KF +K S N + G
Sbjct: 244 GIAVCCCLPCIIAIL---YALADQEGAPDEEIERLLKFKFLVVKNSEKVNGEIRETQGGI 300
Query: 341 GGVVAAGTEKERVISGEDA---VCFC 363
+ A ++ ERV+S EDA +C C
Sbjct: 301 MTGLGAESQTERVLSSEDAECSICLC 326
>gi|356539808|ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 387
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 151/355 (42%), Gaps = 64/355 (18%)
Query: 46 STHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRR-RSP--- 101
+T + + +DST S+GSS + TS + + F R+ RR R P
Sbjct: 3 TTRSSSEDIVDSTPLLANSAGSSDDLTSGRRFARRQRLRQAAQFLRQASGRRMMREPSML 62
Query: 102 ----------LNSGLW------ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGY 145
W + +++V L+ VV A VL + E P PL WIVGY
Sbjct: 63 VREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVLVLSASEAPGMPLRLWIVGY 122
Query: 146 AAGCVATLPLLYWRYRQSNQV--SEPDSVQSR--------NSSARLNAPAAPFSISVPRT 195
A CV + + YR+ + + SVQ R + S+R + +A S
Sbjct: 123 AMQCVLHMVFVCVEYRRRRRQQPAAASSVQDRVGSSSGNLSVSSREGSASASASAQNVLL 182
Query: 196 SEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSA 254
+++D +A H NT F VW+++G W+ GG + A
Sbjct: 183 GQLDDESTSVAKHLESANTM-------------------FSFVWWIIGFYWVSAGGQALA 223
Query: 255 ADAPNLYRLCIVFLA----ISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATA 310
D+P LY LCI+FL A+ I+ +CCCLPCI+++L D GA+
Sbjct: 224 QDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVTD---QEGASK 280
Query: 311 ESIDALPTYKFKLKKSRSSNDRDNSSSIGD-GGVVA---AGTEKERVISGEDAVC 361
E I+ L +KF+ + SN++ + G GG++ A + E ++ EDA C
Sbjct: 281 EDIEQLSKFKFRRIE---SNEKLTGTIQGPVGGIMTECQADSPIEHALAEEDAEC 332
>gi|297599741|ref|NP_001047717.2| Os02g0674700 [Oryza sativa Japonica Group]
gi|255671161|dbj|BAF09631.2| Os02g0674700 [Oryza sativa Japonica Group]
Length = 379
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 40/272 (14%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ L+ ++ A VL++ R E P PL WIVGYA CV + + YR
Sbjct: 85 VALDLLWNLAFILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYRMR---- 140
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPR-----FK 222
R + +P + E+ +S ++ G +PR +
Sbjct: 141 ------------RGQSGESPMAAD-------EETGTDGSSSSSDEDAGERAPRGRNGDYV 181
Query: 223 VLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAM 277
+ ++ + A F +W+++G W+ GG DAP LY LCI + A+
Sbjct: 182 RIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVAL 241
Query: 278 PFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSS 337
I+ +CCCLPCI++IL D GA+ + I +P YKF+ + + S
Sbjct: 242 ACIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGS 298
Query: 338 IGDGGVVAAGTEK--ERVISGEDA-VCFCWTA 366
G G ++ GT + E+V++ EDA C C +A
Sbjct: 299 SG-GIMIECGTNQPIEKVLAAEDAECCICLSA 329
>gi|224101895|ref|XP_002312464.1| predicted protein [Populus trichocarpa]
gi|222852284|gb|EEE89831.1| predicted protein [Populus trichocarpa]
Length = 351
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 134/315 (42%), Gaps = 57/315 (18%)
Query: 71 PTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGL------W------ISVELVLTLSQ 118
PTS S S A RRG S R L W +S++++ +
Sbjct: 19 PTSPTSRQTTLSALLGRATGRRGPSMLVRETAARELDERRADWGYSKPVVSLDMMWNAAF 78
Query: 119 VVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSS 178
VV +V +L V E P P+ WI GYA C+ + L++ YR+ N E D + S+
Sbjct: 79 VVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTRRERDIESQQQST 138
Query: 179 ARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAV 238
N P S+ ED RA S R S +V + +
Sbjct: 139 EEENVP----------ESDEEDDRASFISPRSSVTKRCES--VNTMVSF----------L 176
Query: 239 WFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFILCATICCCLPC 291
W++VG W+ GG +AP+LY L +VFL AI C+ A ++ +CCCLPC
Sbjct: 177 WWMVGFYWVVSGGDVLLQNAPHLYWLAVVFLAFDVFFAIFCVVLAC--LIGIALCCCLPC 234
Query: 292 IVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK- 350
I++IL +A GA+ + LP YKF++ ++ + I G +V T
Sbjct: 235 IIAIL---YAVAGQEGASEADLIQLPKYKFQMIRN------EEKPGIEAGKMVPVETSSR 285
Query: 351 ----ERVISGEDAVC 361
ER++ EDA C
Sbjct: 286 FLGTERILLPEDAEC 300
>gi|357495163|ref|XP_003617870.1| RING finger protein [Medicago truncatula]
gi|355519205|gb|AET00829.1| RING finger protein [Medicago truncatula]
Length = 337
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 150/335 (44%), Gaps = 62/335 (18%)
Query: 43 SSNSTHDRTSNGLDSTRHEDGSSGSSR-NPTSQPSTSVNG----SNTRNVAFTRR----- 92
+SNS +SN TR E S +R S PS SV S +R RR
Sbjct: 8 NSNSIVQSSSNS--ETREERVVSSRNRPQHASSPSFSVRMAMRISRSRWFTLLRRVFHYQ 65
Query: 93 --GESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCV 150
S +P NS W+ +E + + Q++ + L + + E P P+ WI GY GCV
Sbjct: 66 NGSRSNLGSNPFNSSTWLMMEFIALIIQIIISTFTLVISKREKPVWPMRIWISGYDIGCV 125
Query: 151 ATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRG 210
L +Y RYRQ + + D++ S++E R
Sbjct: 126 LNLLTVYGRYRQIYLI-QGDALS---------------------LSDIEQQR-------- 155
Query: 211 GQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLA 269
N+G R L+ + +L+ FFA+WFV+GNVW+F S AP L+ LCI L
Sbjct: 156 --NSG--ETRMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLCITLLT 211
Query: 270 ISCIGYAMPFILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFKLKKSRS 328
+ I Y+ PF+L +CCC+P I ++LG ++A + +GA+ E I LP+++ K +
Sbjct: 212 WNAICYSFPFLLFLLLCCCVPLISTLLGYNMNIASSNKGASDEQISQLPSWRHKEPHATK 271
Query: 329 SNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFC 363
++S SI E+ I+ + C C
Sbjct: 272 LELGNDSESI------------EKFINEDPECCIC 294
>gi|18413629|ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName:
Full=RING finger protein At4g11680
gi|16323218|gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110 [Arabidopsis thaliana]
gi|66865946|gb|AAY57607.1| RING finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 390
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++++ L+ V V VL + R E P PL W+VGY C + + YR+ +
Sbjct: 110 VFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRR 169
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
P+ + L ++ +S+ + + + P A H NT
Sbjct: 170 HPED----GGGSGLTNSSSQQYVSLAQLEDRGETSNP-AKHLESANTM------------ 212
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFILC 282
F +W+++G W+ GG + ++D+P LY LCI+FL A+ ++
Sbjct: 213 -------FSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIG 265
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL +A GA+ ID +P ++F + + + S G
Sbjct: 266 LAVCCCLPCIIAIL---YAVADQEGASKNDIDQMPKFRFT-----KTGNVEKLSGKARGI 317
Query: 343 VVAAGTEK--ERVISGEDA---VCFC-WTAGF-------NHEFRYLVIDLSIFVYHR 386
+ GT+ ER +S EDA +C C + G NH F ID + + R
Sbjct: 318 MTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSR 374
>gi|449432181|ref|XP_004133878.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449480146|ref|XP_004155812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 385
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 121/278 (43%), Gaps = 30/278 (10%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
I ++L+ L+ V+ + VL + E P PL WI+GYA C+ + + Y++
Sbjct: 89 ILLDLLWNLAFVIISFTVLGLSTSEKPSVPLRFWIIGYALQCIIHMSCVAVEYKRRRSTR 148
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
EP + RNS + S S+ +D+ + + LV++
Sbjct: 149 EPTGLD-RNSDWTSGEDSNSVS-----GSDGDDYATEQTVNEDESSN---------LVKH 193
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLAISC----IGYAMPFILC 282
+ A F +W+++G W+ GG +P LY L I FLA I A+ ++
Sbjct: 194 IESANTMFSFIWWLLGFYWVTAGGQELIEGSPQLYWLSITFLAFDVVFVLICVAIACLVG 253
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
ICCCLPCI++IL D GAT E I+ LP Y F + D S GG
Sbjct: 254 VAICCCLPCIIAILYAVTD---QEGATKEEIERLPKYTFNRTGDVEKVNGDIQES--SGG 308
Query: 343 VVA---AGTEKERVISGEDA-VCFCWTAGFN-HEFRYL 375
+++ ER + ED+ C C +A N E R L
Sbjct: 309 IMSNCDTDAPTERFLRPEDSECCICLSAYENGAELREL 346
>gi|226531600|ref|NP_001147541.1| protein binding protein [Zea mays]
gi|195612076|gb|ACG27868.1| protein binding protein [Zea mays]
Length = 375
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 118/269 (43%), Gaps = 34/269 (12%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRY--RQSNQ 165
++++ + L+ ++ + VVL + HE P PL WI GY A CV + + Y R
Sbjct: 81 VALDFLWNLAFILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCVAIEYCLRYGQL 140
Query: 166 VSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLV 225
P V + S ++ ++ S D + IA H NT
Sbjct: 141 GGSPIPVDEESGSGSASSSSSDDDREHGSHSRSGDCLS-IAKHLESANTM---------- 189
Query: 226 EYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFI 280
F VW+++G W+ GG DAP LY LCI+FLA A+ I
Sbjct: 190 ---------FSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIIFLAFDVFFVVFCVALACI 240
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI++IL D GA+ + I +P YKF+ + S G
Sbjct: 241 IGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSG- 296
Query: 341 GGVVAAGTEK--ERVISGEDA-VCFCWTA 366
G ++ GT + E+V++ EDA C C +A
Sbjct: 297 GIMIECGTNQPIEKVLAAEDAECCICLSA 325
>gi|356568312|ref|XP_003552356.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 375
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 238 VWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFILCATICCCLPCI 292
+W++VG W+ GG S D+P LY LCI FLA I I ++ ++ +CCCLPCI
Sbjct: 196 IWWIVGFYWVTAGGQSLTRDSPQLYWLCITFLAFDVVIVLICVSVACLIGIAVCCCLPCI 255
Query: 293 VSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKER 352
++IL + +A GAT E ID LP YKF++ K SS G + T E
Sbjct: 256 LAILYV---VADPEGATKEEIDQLPKYKFRIIKEFKKEGDIEESSRGIMTETESETAAEH 312
Query: 353 VISGEDA-VCFCWTA----------GFNHEFRYLVIDLSIFV 383
VI+ EDA C C +A NH F ID + +
Sbjct: 313 VIALEDAECCICLSAYDNDAELRELPCNHHFHCTCIDKWLLI 354
>gi|255537347|ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223549639|gb|EEF51127.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++++ + V A+ VL + R E P PL WIVGY CV + + YR+ +
Sbjct: 88 VILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLWIVGYGLQCVLHMVCVCVEYRRRRRRR 147
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDH--RAPIASHRGGQNTGVLSPRFKVLV 225
S L++ + S +++EDH + +A H NT
Sbjct: 148 RRVGF-GIGSDGNLSSGSRGDSGEYVTLAQLEDHDGTSSVAKHLESANT----------- 195
Query: 226 EYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFI 280
F +W+++G W+ GG + + ++P LY LCI+FL A+ I
Sbjct: 196 --------MFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFFVVFCVALACI 247
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKL--KKSRSSNDRDNSSSI 338
+ +CCCLPCI++IL +A GA+ E I+ L +KF+ + + + D +
Sbjct: 248 IGIAVCCCLPCIIAIL---YAVADQEGASKEDIEQLSKFKFRRVDNDEKLTGNGDEQGPL 304
Query: 339 GDGGVVAAGTEK--ERVISGEDA-VCFCWTA 366
G G + GT+ E ++S EDA C C +A
Sbjct: 305 G-GVMTECGTDSPVEHILSEEDAECCICLSA 334
>gi|302772434|ref|XP_002969635.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
gi|300163111|gb|EFJ29723.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
Length = 321
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 122/264 (46%), Gaps = 31/264 (11%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++L+ L+ V A+VVL + + E P PL W++GYA CV S VS
Sbjct: 30 VVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWVLGYALQCV---------LHMSCVVS 80
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
E + R SS A + +E+ DH + HR + F L +
Sbjct: 81 EYRRRRRRRSS------GAGMELEDMEDNEI-DHISNEEKHRLLTGSSFFP--FCSLAKR 131
Query: 228 FKMALDCFFAVWFVVGNVWIFGGHSSAAD-APNLYRLCI----VFLAISCIGYAMPFILC 282
+ A F VW+VVG WI G + +P +Y LCI + A+ ++
Sbjct: 132 LESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCVALACMIG 191
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSN----DRDNSSSI 338
+CCCLPCI++IL D GA+ E I LPT KFK KS S + D ++ +++
Sbjct: 192 IAVCCCLPCIIAILYAVVD---QEGASEEDISVLPTLKFKRVKSPSCSSTKPDEEDKAAL 248
Query: 339 GDGGVVAAGTEK-ERVISGEDAVC 361
GGV+ + +R++S EDA C
Sbjct: 249 PAGGVMCSSESLFQRMLSAEDAEC 272
>gi|356565289|ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 379
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 42/272 (15%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++++ + V +A VL + R+E+P PL WIVGYA V + + YR+ +
Sbjct: 88 VVLDILWNCAFVAAAATVLVLSRNENPNMPLRLWIVGYALQSVLHVACVCVEYRRRLRHR 147
Query: 168 EPDSVQ--SRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLV 225
E + S + S L++P+ S +D +A H NT
Sbjct: 148 EHSNAAAVSGDGSGDLSSPSMDGS---GHYVSFDDDGISMAKHLESANTM---------- 194
Query: 226 EYFKMALDCFFAVWFVVGNVWIFGGHSS-AADAPNLYRLCIVFLA------ISCIGYAMP 278
F +W+VVG W+ + D+P LY LCI FL + CI A+
Sbjct: 195 ---------FSFIWWVVGFYWVSADSEALVQDSPLLYWLCIAFLGFDVFFVVFCI--ALA 243
Query: 279 FILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI 338
I+ +CCCLPCI+++L +A GA+ E I+ L KFK +++ ++ ++
Sbjct: 244 CIIGIAVCCCLPCIIALL---YAVADQEGASKEDIEQLS--KFKFQRTETNEKHAGNTQG 298
Query: 339 GDGGVVA---AGTEKERVISGEDA-VCFCWTA 366
GG++ A + E V+S EDA C C +A
Sbjct: 299 AAGGIMIECDADSPIEHVLSDEDAECCICLSA 330
>gi|356530111|ref|XP_003533627.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 369
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 117/275 (42%), Gaps = 39/275 (14%)
Query: 125 VLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAP 184
VL++ E P PL WIVGY LL V+E R +A ++
Sbjct: 97 VLALSADEDPCVPLRAWIVGY---------LLQGALHSLCVVAE---FTRRRRTATISGT 144
Query: 185 AAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGN 244
+ ++ +SE ++ P G + ++ + A +W++VG
Sbjct: 145 HSGSNVEWSFSSESDEEFYPSEQFLEGDGNSI--------TKHIESANTMLSFIWWIVGF 196
Query: 245 VWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFILCATICCCLPCIVSILGLR 299
W+ GG S D+P LY LCI FL+ I I A+ ++ +CCCLPCI++IL +
Sbjct: 197 YWVTAGGQSLTRDSPQLYWLCITFLSFDVMIVLICVAVACLIGIAVCCCLPCILAILYV- 255
Query: 300 EDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDA 359
+A GAT E I+ LP YKF + K SS G + T E VI+ EDA
Sbjct: 256 --VADQEGATKEEIEQLPKYKFIIIKEFKKEGDIEESSRGIMTESESETATEHVIALEDA 313
Query: 360 -VCFCWTA----------GFNHEFRYLVIDLSIFV 383
C C +A NH F ID + +
Sbjct: 314 ECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLI 348
>gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 14/269 (5%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ L+ ++ A VL++ R E P PL WIVGYA CV + + YR S
Sbjct: 85 VALDLLWNLAFILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYRMRRGQS 144
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVE--DHRAPIASHRGGQNTGVLSPRFKVLV 225
+ + + + ++ + R D+ + H + + +
Sbjct: 145 GESPMAADEETGTDGSSSSSDEDAGERAPRGRNGDYVRSVGHHIFYPDNFSVHKSACSIA 204
Query: 226 EYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFI 280
++ + A F +W+++G W+ GG DAP LY LCI + A+ I
Sbjct: 205 KHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALACI 264
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI++IL D GA+ + I +P YKF+ + + S G
Sbjct: 265 IGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGSSG- 320
Query: 341 GGVVAAGTEK--ERVISGEDA-VCFCWTA 366
G ++ GT + E+V++ EDA C C +A
Sbjct: 321 GIMIECGTNQPIEKVLAAEDAECCICLSA 349
>gi|326498713|dbj|BAK02342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 374
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 30/282 (10%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ +S + A VVL + R+E+ PL W+ GYA C+ + + YR
Sbjct: 83 VALDLLWNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRM----- 137
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
S R P S + G++T +S L ++
Sbjct: 138 --------RRSQRGGGPVPADEERGSDVSSSSSDEDASENQLRGRDTDYVS-----LAKH 184
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAMPF----ILC 282
+ A F +W+++G WI GG DAP LY LCIVFLA I+
Sbjct: 185 LESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 244
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL D GA+ + I +P YKF+ + D + S G G
Sbjct: 245 IAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFRRVDEPEKDSADATESSG-GI 300
Query: 343 VVAAGTEK--ERVISGEDA-VCFCWTAGFNHEFRYLVIDLSI 381
+ GT + E+ ++ EDA C C +A +++ + ++ +I
Sbjct: 301 MTECGTNQPIEKALAAEDAECCICISAAEARKYKRIPLENAI 342
>gi|297813655|ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
gi|297320548|gb|EFH50970.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 124/282 (43%), Gaps = 45/282 (15%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++++ L+ V V VL + R E P PL W+VGY C + + YR+ +
Sbjct: 109 VFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRR 168
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
S + N+ + +S+ + + + P A H NT
Sbjct: 169 HRSSSEDGGGPGFTNSSQQQY-VSLAQLEDRGETSNP-AKHLESANTM------------ 214
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFILC 282
F +W+++G W+ GG + + D+P LY LCI+FL A+ ++
Sbjct: 215 -------FSFIWWIIGFYWVSAGGQTLSGDSPQLYWLCIIFLGFDVFFVVFCVALACVIG 267
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL +A GA+ ID +P ++F ++ ND + S G
Sbjct: 268 LAVCCCLPCIIAIL---YAVADQEGASKNDIDQMPKFRF----TKIGND-EKLSGKARGI 319
Query: 343 VVAAGTEK--ERVISGEDAVCFCWTAGFNHEFRYLVIDLSIF 382
+ GT+ ER +S EDAV H ++++ L IF
Sbjct: 320 MTECGTDSPIERSLSPEDAV---------HSHFHILMQLYIF 352
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 27/267 (10%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ L+ + A VVL + R E PL W+ GYA CV + + YR +
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVVHMICVAIEYRMRH--- 141
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
R S+ APA S +S ++ + H G+ T + + ++
Sbjct: 142 -----GQRGSAVAGAAPADVERGSDASSSSSDEDDRELDLH--GRRTD-----YASIAKH 189
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAMPF----ILC 282
+ A F +W+++G WI GG DAP LY LCIVFLA I+
Sbjct: 190 LESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 249
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL D GA+ + I +P YKF+ D D G G
Sbjct: 250 IAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRTDEPEKQDVDPMGPFG-GI 305
Query: 343 VVAAGTEK--ERVISGEDA-VCFCWTA 366
++ GT + E+V++ EDA C C +A
Sbjct: 306 MIECGTNQPIEKVLAAEDAECCICLSA 332
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 27/267 (10%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ L+ + A VVL + R E PL W+ GYA CV + + YR +
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVVHMICVAIEYRMRH--- 141
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
R S+ APA S +S ++ + H G+ T + + ++
Sbjct: 142 -----GQRGSAVAGAAPADVERGSDASSSSSDEDDRELDLH--GRRTD-----YASIAKH 189
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAMPF----ILC 282
+ A F +W+++G WI GG DAP LY LCIVFLA I+
Sbjct: 190 LESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 249
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL D GA+ + I +P YKF+ D D G G
Sbjct: 250 IAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRTDEPEKQDVDPMGPFG-GI 305
Query: 343 VVAAGTEK--ERVISGEDA-VCFCWTA 366
++ GT + E+V++ EDA C C +A
Sbjct: 306 MIECGTNQPIEKVLAAEDAECCICLSA 332
>gi|4539459|emb|CAB39939.1| putative protein [Arabidopsis thaliana]
gi|7267868|emb|CAB78211.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 39/260 (15%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++++ L+ V V VL + R E P PL W+VGY C + + YR+ +
Sbjct: 110 VFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRR 169
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
P+ + L ++ +S+ + + + P A H NT
Sbjct: 170 HPED----GGGSGLTNSSSQQYVSLAQLEDRGETSNP-AKHLESANTM------------ 212
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFILC 282
F +W+++G W+ GG + ++D+P LY LCI+FL A+ ++
Sbjct: 213 -------FSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIG 265
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL +A GA+ ID +P ++F + + + S G
Sbjct: 266 LAVCCCLPCIIAIL---YAVADQEGASKNDIDQMPKFRFT-----KTGNVEKLSGKARGI 317
Query: 343 VVAAGTEK--ERVISGEDAV 360
+ GT+ ER +S EDAV
Sbjct: 318 MTECGTDSPIERSLSPEDAV 337
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 43/266 (16%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++++ +S V+ ++V+L E P P+ WI GYA C + L++ YR+ N+
Sbjct: 2014 VALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRR 2073
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
D Q + S S SE ED +S GG N ++ R + +
Sbjct: 2074 VRDEEQQQQPQ---------HSDSDVNDSEDEDGN---SSASGGFNQSSVTKRCESV--- 2118
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFI 280
+ F +W++VG W+ GG + +AP LY L +VFL AI C+ + +
Sbjct: 2119 --NTMASF--LWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCV--VLACL 2172
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI++IL +A GA+ + LP Y+F+ + + S +G
Sbjct: 2173 IGIALCCCLPCIIAIL---YAVAGQEGASEADLSMLPRYRFE-------ANNEEKSGVGA 2222
Query: 341 GGVVAAGTE-----KERVISGEDAVC 361
G ++ T ER++ EDA C
Sbjct: 2223 GTMIPTETSSGYLANERILLPEDAEC 2248
>gi|357507063|ref|XP_003623820.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355498835|gb|AES80038.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 366
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 113/271 (41%), Gaps = 47/271 (17%)
Query: 132 EHPRAPLFEWIVGY-AAGCVAT--LPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPF 188
E P PL WI+GY G V + + L + R R+ + + + DSV ++
Sbjct: 103 EEPCVPLRVWILGYLLQGLVHSVCVVLEFRRRRRGSYLEDDDSVLENGLRWSFSS----- 157
Query: 189 SISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI- 247
SE E I H NT +LS +W+++G W+
Sbjct: 158 ESDSDFASEHESEENSIIKHIESANT-ILS------------------FIWWILGFYWVT 198
Query: 248 FGGHSSAADAPNLYRLCIVFLAIS----CIGYAMPFILCATICCCLPCIVSILGLREDLA 303
GG S D+P LY LCI FLA I A+ ++ +CCCLPCI++IL D
Sbjct: 199 VGGQSLTKDSPQLYWLCITFLAFDVVIVVICVAVACLIGIAVCCCLPCILAILYAVAD-- 256
Query: 304 QTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDA-VCF 362
+GAT E ID LP YKF++ K SS G T E VI+ EDA C
Sbjct: 257 --QGATMEEIDQLPKYKFRMIKESKEEGDAQESSRGVMTECDNDTASEHVIALEDAECCI 314
Query: 363 CWTA----------GFNHEFRYLVIDLSIFV 383
C +A NH F ID + +
Sbjct: 315 CLSAYDDGAELRELPCNHHFHCTCIDKWLLI 345
>gi|359474243|ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 117/250 (46%), Gaps = 29/250 (11%)
Query: 130 RHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQV-----SEPDSVQSRNSSARLNAP 184
R E P PL WIVGYA C+ + + YR+ + SE D + S S +
Sbjct: 110 RRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQG 169
Query: 185 AAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGN 244
+ +++ + V++H + Q LS + ++ + A F +W+++G
Sbjct: 170 DSSQYVTL---ANVDEHHS--------QTCQFLS-LLSSVAKHLESANTMFSFIWWIIGF 217
Query: 245 VWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFILCATICCCLPCIVSILGLR 299
W+ GG + A D+P LY LCI+FL A+ ++ +CCCLPCI++IL
Sbjct: 218 YWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAIL--- 274
Query: 300 EDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGE 357
+A GA+ E ID L +KF+ D D + G G + GT+ E V+S E
Sbjct: 275 YAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACG-GIMTECGTDAPTEHVLSQE 333
Query: 358 DA-VCFCWTA 366
DA C C +A
Sbjct: 334 DAECCICLSA 343
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 115/268 (42%), Gaps = 31/268 (11%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ L+ + A VVL + R E PL W+ GYA CV + + YR +
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVIHMVCVAIEYRMRH--- 141
Query: 168 EPDSVQSRNSSARLNAPAAPF-SISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
R A AAP S R G+ T + + +
Sbjct: 142 ----------GQRGGAGAAPADEERGSDGSSSSSDEDDRELDRHGRRTD-----YASIAK 186
Query: 227 YFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAMPF----IL 281
+ + A F +W+++G WI GG DAP LY LCIVFLA I+
Sbjct: 187 HLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACII 246
Query: 282 CATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI++IL D GA+ + I +P YKF+ D D G G
Sbjct: 247 GIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRTDEPEKQDVDPMGPFG-G 302
Query: 342 GVVAAGTEK--ERVISGEDA-VCFCWTA 366
+ GT + E+V++ EDA C C +A
Sbjct: 303 IMTECGTNQPIEKVLAAEDAECCICLSA 330
>gi|147769549|emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 139/320 (43%), Gaps = 48/320 (15%)
Query: 59 RHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRR----RRSPLN-SGLWISVELV 113
R G++ S PT+ + R + R + R RR+ S ++++++
Sbjct: 16 RPRQGTAEQSARPTTLALLMGRATGRRGPSMLVRETAARELEERRADWGYSKPVVALDMM 75
Query: 114 LTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQ 173
+S V+ ++V+L E P P+ WI GYA C + L++ YR+ ++ D Q
Sbjct: 76 WNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRSRRRVRDEEQ 135
Query: 174 SRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALD 233
+ S S SE ED +S GG N ++ R + +
Sbjct: 136 QQQPQ---------HSDSDVNDSEDEDGN---SSASGGFNQSSVTKRCESVNTMASF--- 180
Query: 234 CFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFILCATIC 286
+W++VG W+ GG + +AP LY L +VFL AI C+ + ++ +C
Sbjct: 181 ----LWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCV--VLACLIGIALC 234
Query: 287 CCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAA 346
CCLPCI++IL +A GA+ + LP Y+F+ + + S +G G +
Sbjct: 235 CCLPCIIAIL---YAVAGQEGASEADLSMLPRYRFE-------ANNEEKSGVGAGTMFPT 284
Query: 347 GTE-----KERVISGEDAVC 361
T ER++ EDA C
Sbjct: 285 ETSSGYLANERILLPEDAEC 304
>gi|357136998|ref|XP_003570089.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 118/270 (43%), Gaps = 36/270 (13%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYR-QSNQV 166
++++L+ L+ ++ + VVL E+P PL WI GYA CV + + YR + Q
Sbjct: 80 VALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHIVCVAIEYRFRHRQR 139
Query: 167 SEPDSV--QSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVL 224
P + R + ++ +S+P R IA H NT
Sbjct: 140 GGPSMAADEERGTDGSSSSTDEDAGVSIPHGRIGNYVR--IAKHLESGNT---------- 187
Query: 225 VEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPF 279
F +W+++G W+ GG DAP LY LCI + A+
Sbjct: 188 ---------MFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALAC 238
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIG 339
I+ +CCCLPCI++IL D GA+ + I +P YKF+ N + S G
Sbjct: 239 IIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSG 295
Query: 340 DGGVVAAGTEK--ERVISGEDA-VCFCWTA 366
G ++ GT + E+V++ EDA C C +A
Sbjct: 296 -GIMIECGTNQPIEKVLAAEDAECCICLSA 324
>gi|38344371|emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group]
Length = 324
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 30/267 (11%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ L+ + A VVL + R E PL W+ GYA CV + + YR
Sbjct: 30 VALDLLWNLAFITVAAVVLVLSRGEDSPMPLRTWVAGYALQCVVHMVCVAIEYRM----- 84
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
R APA+ S R G T +S + ++
Sbjct: 85 --------RRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRGSCTDCVS-----IAKH 131
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFILC 282
+ A F +W+++G WI GG DAP LY LCI + A+ I+
Sbjct: 132 LESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 191
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL D GA+ + I +P YKF+ D + G G
Sbjct: 192 IAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRTDEPEKQTADETGPFG-GI 247
Query: 343 VVAAGTEK--ERVISGEDA-VCFCWTA 366
+ GT + E+V++ EDA C C +A
Sbjct: 248 MTECGTNQPIEKVLAPEDAECCICLSA 274
>gi|326489497|dbj|BAK01729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 30/267 (11%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ +S + A VVL + R+E+ PL W+ GYA C+ + + YR
Sbjct: 83 VALDLLWNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRM----- 137
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
S R P S + G++T +S L ++
Sbjct: 138 --------RRSQRGGGPVPADEERGSDVSSSSSDEDASENQLRGRDTDYVS-----LAKH 184
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFILC 282
+ A F +W+++G WI GG DAP LY LCI + A+ I+
Sbjct: 185 LESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 244
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL D GA+ + I +P YKF+ + D + S G G
Sbjct: 245 IAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFRRVDEPEKDSADATESSG-GI 300
Query: 343 VVAAGTEK--ERVISGEDA-VCFCWTA 366
+ GT + E+ ++ EDA C C +A
Sbjct: 301 MTECGTNQPIEKALAAEDAECCICISA 327
>gi|359474241|ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 110/250 (44%), Gaps = 38/250 (15%)
Query: 130 RHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQV-----SEPDSVQSRNSSARLNAP 184
R E P PL WIVGYA C+ + + YR+ + SE D + S S +
Sbjct: 110 RRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQG 169
Query: 185 AAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGN 244
+ S V S ++ +A H NT F +W+++G
Sbjct: 170 DS--SQYVTLASLGDESSTSVAKHLESANTM-------------------FSFIWWIIGF 208
Query: 245 VWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFILCATICCCLPCIVSILGLR 299
W+ GG + A D+P LY LCI+FL A+ ++ +CCCLPCI++IL
Sbjct: 209 YWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAIL--- 265
Query: 300 EDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGE 357
+A GA+ E ID L +KF+ D D + G G + GT+ E V+S E
Sbjct: 266 YAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACG-GIMTECGTDAPTEHVLSQE 324
Query: 358 DA-VCFCWTA 366
DA C C +A
Sbjct: 325 DAECCICLSA 334
>gi|356514046|ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 380
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 35/248 (14%)
Query: 130 RHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSAR--LNAPAAP 187
R+E+P PL WIVGYA CV + + Y++ + E + + L P+
Sbjct: 108 RNENPNMPLRLWIVGYALQCVLHVACVCVEYQRRLRRREQSNAAAIAGGGSGDLGPPSMD 167
Query: 188 FSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI 247
S ++ +D +A H NT F +W+VVG W+
Sbjct: 168 GSGHYVSLAQFDDDGISMAKHLESANTM-------------------FSFIWWVVGFYWV 208
Query: 248 FGGHSSAA-DAPNLYRLCIVFLAIS----CIGYAMPFILCATICCCLPCIVSILGLREDL 302
S D+P LY LCI FL A+ I+ +CCCLPCI+++L +
Sbjct: 209 SADSESLVRDSPLLYWLCIAFLGFDVFFVVFCMALACIVGIAVCCCLPCIIALLYA---V 265
Query: 303 AQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVA---AGTEKERVISGEDA 359
A GA+ E I+ L KFK +++ ++ ++ GG++ A + E V+S EDA
Sbjct: 266 ADQEGASKEDIEQLS--KFKFQRTETNEKLAGNTQGAAGGIMIECDADSPIEHVLSDEDA 323
Query: 360 -VCFCWTA 366
C C +A
Sbjct: 324 ECCICLSA 331
>gi|18411876|ref|NP_567110.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|16648921|gb|AAL24312.1| putative protein [Arabidopsis thaliana]
gi|17978715|gb|AAL47351.1| putative protein [Arabidopsis thaliana]
gi|332646647|gb|AEE80168.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 379
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 36/268 (13%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGC---VATLPLLYWRYRQSN 164
I ++++ V+ ++ +L E P PL WI+GY C V + Y R R +N
Sbjct: 85 IVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVAN 144
Query: 165 QVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVL 224
P S N + + S+ T + +DH H NT
Sbjct: 145 S-PPPSGEDSSNHESLSGSEDESDGYSINNTDD-DDHGTSFTKHLESANT---------- 192
Query: 225 VEYFKMALDCFFAVWFVVGNVWIFGGHSSAAD-APNLYRLCIVFLAIS----CIGYAMPF 279
F VW+++G W+ + A +P LY LC+ FLA I A+
Sbjct: 193 ---------MFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVAS 243
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSSI 338
++ +CCCLPCI++IL LA GA E I+ L +KF +K S N +
Sbjct: 244 LIGIAVCCCLPCIIAIL---YALADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQG 300
Query: 339 GDGGVVAAGTEKERVISGEDA---VCFC 363
G + ++ ER++ EDA +C C
Sbjct: 301 GIMTGLDTESQTERMLLSEDAECSICLC 328
>gi|6850885|emb|CAB71048.1| putative protein [Arabidopsis thaliana]
Length = 362
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 36/268 (13%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGC---VATLPLLYWRYRQSN 164
I ++++ V+ ++ +L E P PL WI+GY C V + Y R R +N
Sbjct: 68 IVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVAN 127
Query: 165 QVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVL 224
P S N + + S+ T + +DH H NT
Sbjct: 128 S-PPPSGEDSSNHESLSGSEDESDGYSINNTDD-DDHGTSFTKHLESANT---------- 175
Query: 225 VEYFKMALDCFFAVWFVVGNVWIFGGHSSAAD-APNLYRLCIVFLAIS----CIGYAMPF 279
F VW+++G W+ + A +P LY LC+ FLA I A+
Sbjct: 176 ---------MFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVAS 226
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSSI 338
++ +CCCLPCI++IL LA GA E I+ L +KF +K S N +
Sbjct: 227 LIGIAVCCCLPCIIAIL---YALADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQG 283
Query: 339 GDGGVVAAGTEKERVISGEDA---VCFC 363
G + ++ ER++ EDA +C C
Sbjct: 284 GIMTGLDTESQTERMLLSEDAECSICLC 311
>gi|302774967|ref|XP_002970900.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
gi|300161611|gb|EFJ28226.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
Length = 321
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++L+ L+ V A+VVL + + E P PL W++GYA CV S VS
Sbjct: 30 VVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWVLGYALQCV---------LHMSCVVS 80
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
E + R SS A + +E+ DH + H TG F L +
Sbjct: 81 EYRRRRRRRSS------GAGMELEDMEDNEI-DHISNEEKH--SLLTGSSFFPFCSLAKR 131
Query: 228 FKMALDCFFAVWFVVGNVWIFGGHSSAAD-APNLYRLCI----VFLAISCIGYAMPFILC 282
+ A F VW+VVG WI G + +P +Y LCI + A+ ++
Sbjct: 132 LESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCVALACMIG 191
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKK----SRSSNDRDNSSSI 338
+CCCLPCI++IL D GA+ E I LPT KFK + S + D ++ +++
Sbjct: 192 IAVCCCLPCIIAILYAVVD---QEGASEEDISVLPTLKFKRVRNPSCSSTKPDEEDKAAL 248
Query: 339 GDGGVVAAGTEK-ERVISGEDAVC 361
GGV+ + +R++S EDA C
Sbjct: 249 PAGGVMCSSESLFQRMLSAEDAEC 272
>gi|356513054|ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
max]
Length = 334
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 61/268 (22%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+++++ ++ V+ + V+L+ E+P P+ WI GYA C+ + L++ YR+ N
Sbjct: 63 VALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRN--- 119
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
D+ + S+A L + +D R + L+ +L
Sbjct: 120 --DAPRDEESAASL---------------QYDDVNDSDEDARFTKRCASLNTMISLL--- 159
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFI 280
W++VG W+ GG DAP LY L +VFL AI C+ A +
Sbjct: 160 -----------WWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLAC--L 206
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI++IL +A GA+ + LP Y+F+L N + G+
Sbjct: 207 IGIALCCCLPCIIAIL---YAVAGQEGASESDLSILPKYRFQLLS--------NEETPGE 255
Query: 341 GGVVAAGTE-------KERVISGEDAVC 361
GG E ER +S EDA C
Sbjct: 256 GGGSMIPMETSNGYSVNERTLSPEDAEC 283
>gi|356497216|ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 155/386 (40%), Gaps = 73/386 (18%)
Query: 46 STHDRTSNGLDSTRHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRR-RSP--- 101
+T + + +DST S GSS TS S + F RR RR R P
Sbjct: 3 TTRSSSEDIVDSTPLLANSGGSSDELTSGRGFSRRQRLRQAARFLRRASGRRMMREPSML 62
Query: 102 LNSGLWISVELVLTLSQVVSAVVVLSVFRH----------------EHPRAPLFEWIVGY 145
+ +E + VVVL + + E P PL WIVGY
Sbjct: 63 VREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVLSASEAPGMPLRLWIVGY 122
Query: 146 AAGCVATLPLLYWRY--RQSNQVSEPDSVQSR------NSSARLNAPAAPFSISVPRTSE 197
A CV + + Y R+ Q + SVQ R N S +A S +
Sbjct: 123 AMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVSSREGSASGSAQYVSLGQ 182
Query: 198 VEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAAD 256
++D +A H NT F VW+++G W+ GG + A D
Sbjct: 183 LDDEGTSVAKHLESANTM-------------------FSFVWWIIGFYWVSAGGQALAQD 223
Query: 257 APNLYRLCIVFLA----ISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAES 312
+P LY LCI+FL A+ I+ +CCCLPCI+++L +A GA+ E
Sbjct: 224 SPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALL---YAVADQEGASKED 280
Query: 313 IDALPTYKFKLKKSRSSNDRDNSSSIGD-GGVVA---AGTEKERVISGEDAVCFCWTAGF 368
I+ L +KF+ + SN++ + G GG++ A + E V++ EDA C + +
Sbjct: 281 IEQLSKFKFRRIE---SNEKLTGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSY 337
Query: 369 N-----------HEFRYLVIDLSIFV 383
+ H F + +D +++
Sbjct: 338 DDGVELRELPCGHHFHCVCVDKWLYI 363
>gi|326524540|dbj|BAK00653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 30/267 (11%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ +S + A VVL + R+E+ PL W+ GYA C+ + + YR
Sbjct: 83 VALDLLWNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRM----- 137
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
S R P S + G++T +S L ++
Sbjct: 138 --------RRSQRGGGPVPADEERGSDVSSSSSDEDASENQLRGRDTDYVS-----LAKH 184
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFILC 282
+ A F +W+++G WI GG DAP LY LCI + A+ I+
Sbjct: 185 LESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 244
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL D GA+ + I +P YKF+ + D ++ G
Sbjct: 245 IAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFR-RVDEPEKDSAGATESSGGI 300
Query: 343 VVAAGTEK--ERVISGEDA-VCFCWTA 366
+ GT + E+ ++ EDA C C +A
Sbjct: 301 MTECGTNQPIEKALAAEDAECCICISA 327
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 120/271 (44%), Gaps = 35/271 (12%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+++++V + VV ++ +L + E P P+ WI GYA C+ + L++ YR+ N
Sbjct: 667 VALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIEYRRRNSRR 726
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
D + R + A + E E G V S R V+
Sbjct: 727 VRD--EERQQQQQQQAEVE------GQHEENEGENVDSEDEDGVDRASVTSNRSSVIKRC 778
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFI 280
+ F +W++VG W+ GG +AP+LY L +VFL AI C+ + +
Sbjct: 779 ESVNTMASF-LWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCV--VLACL 835
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI++IL +A GA+ + LP Y+F+L + S+G
Sbjct: 836 IGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFQLTV------EEEKPSVGA 886
Query: 341 GGVVAAGTE-----KERVISGEDA---VCFC 363
G +V T ER++ EDA +C C
Sbjct: 887 GKMVPIETSSGYLANERILLPEDAECCICLC 917
>gi|357137002|ref|XP_003570091.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 364
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ L+ ++ + VVL E+P PL WI GYA CV + + YR
Sbjct: 80 VALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHIVCVAIEYR------ 133
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
+ R P + E+ +S ++ GV P +
Sbjct: 134 ----FRHRQRGG-------------PSMAADEERGTDGSSSSTDEDAGVSIPHGR----- 171
Query: 228 FKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM----PFILC 282
+ F +W+++G W+ GG DAP LY LCIVFLA I+
Sbjct: 172 LESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIG 231
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPCI++IL D GA+ + I +P YKF+ N + S G G
Sbjct: 232 IAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSG-GI 287
Query: 343 VVAAGTEK--ERVISGEDA-VCFCWTA 366
++ GT + E+V++ EDA C C +A
Sbjct: 288 MIECGTNQPIEKVLAAEDAECCICLSA 314
>gi|357521319|ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 336
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 40/250 (16%)
Query: 119 VVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSS 178
VV A V+L E+P P+ WI GYA C+ + L+ YR+ N + + R+
Sbjct: 69 VVVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVALVLLEYRRRNVIG---GGRERDEE 125
Query: 179 ARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAV 238
S+ SE +D + S G + R L + +
Sbjct: 126 ----------SLDDVNDSEEDDDVEFLNSSSSG-----FAKRCSSLNTMLSL-------L 163
Query: 239 WFVVGNVWIF-GGHSSAADAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCLPC 291
W++VG W+ GG DAP LY L +VFLA + C+ A+ ++ +CCCLPC
Sbjct: 164 WWMVGFYWVVNGGDILIQDAPRLYWLAVVFLAFDVFFAVFCV--ALACLIGIALCCCLPC 221
Query: 292 IVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
I+ IL +A GA+ + LP Y+F++ + + S + + + E
Sbjct: 222 IIGIL---YAVAGQEGASESDLSTLPKYRFQVPGNEETPSPKGGSMV---PIENSSGANE 275
Query: 352 RVISGEDAVC 361
RV+S EDA C
Sbjct: 276 RVLSPEDAEC 285
>gi|356499571|ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 123/272 (45%), Gaps = 46/272 (16%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRY-RQSNQV 166
+++++ ++ VV + +L+ EHP P+ WIVGYA C+ + L++ Y R+S +
Sbjct: 70 VALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRD 129
Query: 167 SEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
S S ++R+ + + S R+ A NTGV
Sbjct: 130 SRSGSQRARDVESDAGSGDDDDYSDDGDGSSGNTSRSRFAKRCESLNTGV---------- 179
Query: 227 YFKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPF 279
+W++VG W+ GG DAP LY L +VFL AI C+ A
Sbjct: 180 ---------SFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLAC-- 228
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIG 339
++ +CCCLPCI++IL +A GA+ + LP YKF++ +D D S G
Sbjct: 229 LIGIALCCCLPCIIAIL---YAVAGQEGASEADLSMLPKYKFRIL-----SDVDKPSG-G 279
Query: 340 DGGVV-----AAGTEKERVISGEDA---VCFC 363
G +V +A E ER + EDA +C C
Sbjct: 280 AGSMVPIETSSAYLENERTLLLEDAECCICLC 311
>gi|422293880|gb|EKU21180.1| hypothetical protein NGA_0133600 [Nannochloropsis gaditana CCMP526]
Length = 409
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPN---LYRLCIVFLAIS----C 272
R + + + LD F +WFVVGN+W+FGG PN +Y LC+ F+ I+ C
Sbjct: 99 RLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSPVYSLCVAFVFINYAQLC 158
Query: 273 IGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDR 332
+ + I+ +C CLPC++ IL +D + +GAT I+ LP K++ ++ +
Sbjct: 159 LPCVVVIIMLPVLCFCLPCLIRILARIQDPMRGKGATPSMINKLPMMKYRQIQAEKAATA 218
Query: 333 DNSSSIGDGGVVAA-GTEKERVIS 355
S G A+ G E++ +S
Sbjct: 219 SAGSLEGQAAPPASQGGEQDTQVS 242
>gi|356513052|ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 114/268 (42%), Gaps = 51/268 (19%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+++++ ++ V+ + V+L+ E+P P+ WI GYA C+ + L++ YR+ N
Sbjct: 63 VALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRN--- 119
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
D+ + S+A L S + + NT +
Sbjct: 120 --DAPRDEESAASLQYDDVNDSDEDDVGTSGSSSSSGFTKRCASLNTMI----------- 166
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFI 280
+W++VG W+ GG DAP LY L +VFL AI C+ A +
Sbjct: 167 --------SLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLAC--L 216
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI++IL +A GA+ + LP Y+F+L N + G+
Sbjct: 217 IGIALCCCLPCIIAIL---YAVAGQEGASESDLSILPKYRFQL--------LSNEETPGE 265
Query: 341 GGVVAAGTE-------KERVISGEDAVC 361
GG E ER +S EDA C
Sbjct: 266 GGGSMIPMETSNGYSVNERTLSPEDAEC 293
>gi|301133592|gb|ADK63418.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 363
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 111/265 (41%), Gaps = 43/265 (16%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
I ++++ L+ V V V E PRAPL WIVGY C+ + + YR+
Sbjct: 82 IVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHIACVIAEYRRRESNR 141
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
+ DS S + S +E+E + +A H N
Sbjct: 142 DLDSGLSSVQGS-----------SDGYGAEIESGNS-VAKHIESTNA------------- 176
Query: 228 FKMALDCFFAVWFVVGNVWIFG-GHSSAADAPNLYRLCIVFLAISCI----GYAMPFILC 282
F VW+V+G W+ A +P LY LC+ FLA I A+ ++
Sbjct: 177 ------IFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIG 230
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI+++L LA GA+ E I+ LP +KF ++ S N + G
Sbjct: 231 IAVCCCLPCIIAVL---YALADREGASDEEIEKLPKFKFLTVRNSEKVNGEIRETRGGIM 287
Query: 342 GVVAAGTEKERVISGEDA---VCFC 363
+ ERV+S ++A +C C
Sbjct: 288 TQLGVDFPSERVLSSDEAECCICLC 312
>gi|449465805|ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 122/301 (40%), Gaps = 77/301 (25%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSN--- 164
+++++ L+ V ++ VL HE P P+ WIV YAA C+ + L+++ +++ N
Sbjct: 78 VALDITWNLAFVFVSLGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARR 137
Query: 165 -------QVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVL 217
Q EPD + S ED GGQ +
Sbjct: 138 ARDMETQQQQEPDGYVTNESD--------------------EDD--------GGQRS--- 166
Query: 218 SPRFKVLVEYFKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLAISCIGYA 276
F + + + +W++ G W+ GG+ +AP+LY L +VFLA
Sbjct: 167 ---FSSVAKRCESVNTMVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAV 223
Query: 277 MPFILCATI----CCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDR 332
+L I CCCLPCI++IL +A GAT + LP Y++++
Sbjct: 224 FCVVLACLIGIALCCCLPCIIAIL---YAVAGQEGATDADLSMLPKYRYRVS-------- 272
Query: 333 DNSSSIGDGGVVAAGTEK-----ERVISGEDAVCFCWTAGF-----------NHEFRYLV 376
N S GDG +V T ERV+ EDA C + + NH F Y
Sbjct: 273 -NEPSPGDGLMVPVETSSRYLTTERVLLCEDAECCICLSPYEDGVELHALPCNHHFHYAC 331
Query: 377 I 377
I
Sbjct: 332 I 332
>gi|414880832|tpg|DAA57963.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 429
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 55/282 (19%)
Query: 74 QPSTSVNGSNTRNVAFTRRGESR-----RR-------------RSPLNSGLWISVELVLT 115
+P ++ R VA R +R RR +P NS W+++EL +
Sbjct: 136 EPGGRMSALTMRAVA--RMSRARWFVFLRRVYQYQNGPRSDLGSNPFNSPGWLALELGVI 193
Query: 116 LSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSR 175
++QVV V++ E P PL W+ Y G V +LPLLYWR+R S+ S
Sbjct: 194 VAQVVLTTAVVATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWRHRHSSSSSSAGGG--- 250
Query: 176 NSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCF 235
++E H A A G ++ L+ + L+ F
Sbjct: 251 -------------------RGDLEMHGANDAP--GNRS---------YLMNKARAFLELF 280
Query: 236 FAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVS 294
FA+WFV+GNVW+F S AP LY LC+ LA + + Y++PF+L +CC +P +
Sbjct: 281 FAMWFVMGNVWVFDARLGSFQRAPRLYALCVSLLAWNAVVYSLPFLLFLLLCCFVPAVGY 340
Query: 295 ILGLREDLAQT-RGATAESIDALPTYKFKLKKSRSSNDRDNS 335
LG + A RGA+ E + ALP ++FK +RD+
Sbjct: 341 ALGYNMNSASVGRGASDEQLAALPRWRFKEPDVARDRERDDQ 382
>gi|357137000|ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 111/268 (41%), Gaps = 52/268 (19%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYR-QSNQV 166
++++L+ L+ ++ + VVL E+P PL WI GYA CV + + YR + Q
Sbjct: 80 VALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHIVCVAIEYRFRHRQR 139
Query: 167 SEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
P D + IA H NT
Sbjct: 140 GGPSMAADEERGT--------------------DGSSSIAKHLESGNT------------ 167
Query: 227 YFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM----PFIL 281
F +W+++G W+ GG DAP LY LCIVFLA I+
Sbjct: 168 -------MFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACII 220
Query: 282 CATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI++IL D GA+ + I +P YKF+ N + S G G
Sbjct: 221 GIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSG-G 276
Query: 342 GVVAAGTEK--ERVISGEDA-VCFCWTA 366
++ GT + E+V++ EDA C C +A
Sbjct: 277 IMIECGTNQPIEKVLAAEDAECCICLSA 304
>gi|194707262|gb|ACF87715.1| unknown [Zea mays]
gi|194708318|gb|ACF88243.1| unknown [Zea mays]
Length = 324
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 32/268 (11%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++ + L+ ++ + VVL + HE P PL WI GY A CV + +
Sbjct: 30 VALDFLWNLAFILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCV----------- 78
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTG-VLSPRFKVLVE 226
+++ R +L P S H +G LS + +
Sbjct: 79 ---AIEYRLRYGQLGGSPIPVDEESGSGSASSSSSDDDREHGSHSRSGDCLS-----IAK 130
Query: 227 YFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFIL 281
+ + A F VW+++G W+ GG DAP LY LCI + A+ I+
Sbjct: 131 HLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACII 190
Query: 282 CATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI++IL D GA+ + I +P YKF+ + S G G
Sbjct: 191 GIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSG-G 246
Query: 342 GVVAAGTEK--ERVISGEDA-VCFCWTA 366
++ GT + E+V++ EDA C C +A
Sbjct: 247 IMIECGTNQPIEKVLAAEDAECCICLSA 274
>gi|194689606|gb|ACF78887.1| unknown [Zea mays]
gi|413923427|gb|AFW63359.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 375
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 32/268 (11%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++ + L+ ++ + VVL + HE P PL WI GY A CV + +
Sbjct: 81 VALDFLWNLAFILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCV----------- 129
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTG-VLSPRFKVLVE 226
+++ R +L P S H +G LS + +
Sbjct: 130 ---AIEYRLRYGQLGGSPIPVDEESGSGSASSSSSDDDREHGSHSRSGDCLS-----IAK 181
Query: 227 YFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFIL 281
+ + A F VW+++G W+ GG DAP LY LCI + A+ I+
Sbjct: 182 HLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACII 241
Query: 282 CATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI++IL D GA+ + I +P YKF+ + S G G
Sbjct: 242 GIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSG-G 297
Query: 342 GVVAAGTEK--ERVISGEDA-VCFCWTA 366
++ GT + E+V++ EDA C C +A
Sbjct: 298 IMIECGTNQPIEKVLAAEDAECCICLSA 325
>gi|357136996|ref|XP_003570088.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 360
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 112/271 (41%), Gaps = 52/271 (19%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYR-QSNQV 166
++++L+ L+ ++ A VVL + E P PL WI GYA CV + + YR + Q
Sbjct: 80 VALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQR 139
Query: 167 SEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
P + D + IA H NT
Sbjct: 140 GGPSMAADEERGS--------------------DGSSSIAKHLESGNTM----------- 168
Query: 227 YFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM----PFIL 281
F +W+++G W+ GG DAP LY LCIVFLA I+
Sbjct: 169 --------FSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVALACII 220
Query: 282 CATICCCLPCIVSILGLRED---LAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI 338
+CCCLPCI++IL D L GA+ + I +P YKF+ + S
Sbjct: 221 GIAVCCCLPCIIAILYAVSDQVWLLTYEGASEDDIRQIPRYKFRRINEPEKQSVSMTGSS 280
Query: 339 GDGGVVAAGTEK--ERVISGEDA-VCFCWTA 366
G G ++ GT + E+V++ EDA C C +A
Sbjct: 281 G-GMMIECGTNQPIEKVLAAEDAECCICLSA 310
>gi|326498537|dbj|BAJ98696.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 40/266 (15%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ L+ +++ VVL + E P PL WI GYA CV + + YR +
Sbjct: 80 VALDLLWNLAFILTTAVVLVLSGDESPSVPLRIWIAGYAVQCVVHMVCVAIEYRVRHGQR 139
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPR-----FK 222
S+ + ++ R S + G P F
Sbjct: 140 GGSSMAA------------------------DEERGTDGSSSSIDDAGESGPHGRIGYFA 175
Query: 223 VLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM---- 277
+ ++ + A F +W+++G W+ GG DAP LY LCIVFLA
Sbjct: 176 SVAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVAL 235
Query: 278 PFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSS 337
I+ +CCCLPCI++IL D GA+ + I +P YKF+ S
Sbjct: 236 ACIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFRRVDEPEKQSVTMIES 292
Query: 338 IGDGGVVAAGTEK--ERVISGEDAVC 361
G G ++ GT + E+V++ EDA C
Sbjct: 293 SG-GIMIECGTNQPIEKVLAAEDAEC 317
>gi|356524591|ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 360
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 36/261 (13%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+++++ ++ VV + V+L+ E+P P+ WI GYA C+ + L++ YR+ N
Sbjct: 63 VALDMTWNMAFVVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWLEYRRRN--- 119
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
D+ +S+A L+ S + NT +
Sbjct: 120 --DAPGDEDSAANLDYDDVNDSDEDDVGTSGSSSSTGFTKRCASLNTMI----------- 166
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFI 280
+W++VG W+ GG DAP LY L +VFL AI C+ A +
Sbjct: 167 --------SLLWWMVGFYWVVSGGDILLQDAPRLYWLTVVFLAFDVFFAIFCVVLAC--L 216
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI++IL +A GA+ + LP Y+F++ + + S+
Sbjct: 217 IGIALCCCLPCIIAIL---YAVAGQEGASESDLSILPKYRFQMLSNEETPGEGGGGSMIP 273
Query: 341 GGVVAAGTEKERVISGEDAVC 361
+ ER +S EDA C
Sbjct: 274 METSNGYSVNERTLSPEDAEC 294
>gi|357136994|ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 111/268 (41%), Gaps = 52/268 (19%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYR-QSNQV 166
++++L+ L+ ++ A VVL + E P PL WI GYA CV + + YR + Q
Sbjct: 80 VALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQR 139
Query: 167 SEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
P + D + IA H NT
Sbjct: 140 GGPSMAADEERGS--------------------DGSSSIAKHLESGNTM----------- 168
Query: 227 YFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM----PFIL 281
F +W+++G W+ GG DAP LY LCIVFLA I+
Sbjct: 169 --------FSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVALACII 220
Query: 282 CATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI++IL D GA+ + I +P YKF+ + S G G
Sbjct: 221 GIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRINEPEKQSVSMTGSSG-G 276
Query: 342 GVVAAGTEK--ERVISGEDA-VCFCWTA 366
++ GT + E+V++ EDA C C +A
Sbjct: 277 MMIECGTNQPIEKVLAAEDAECCICLSA 304
>gi|357136992|ref|XP_003570086.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 117/268 (43%), Gaps = 32/268 (11%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYR-QSNQV 166
++++L+ L+ ++ A VVL + E P PL WI GYA CV + + YR + Q
Sbjct: 80 VALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQR 139
Query: 167 SEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
P + ++ +S ED + R G + +
Sbjct: 140 GGPSMAADEERGSDGSS-----------SSTDEDAGENVTHGRIGDCVSI--------AK 180
Query: 227 YFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM----PFIL 281
+ + F +W+++G W+ GG DAP LY LCIVFLA I+
Sbjct: 181 HLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVALACII 240
Query: 282 CATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI++IL D GA+ + I +P YKF+ + S G G
Sbjct: 241 GIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRINEPEKQSVSMTGSSG-G 296
Query: 342 GVVAAGTEK--ERVISGEDA-VCFCWTA 366
++ GT + E+V++ EDA C C +A
Sbjct: 297 MMIECGTNQPIEKVLAAEDAECCICLSA 324
>gi|359474239|ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 107/250 (42%), Gaps = 49/250 (19%)
Query: 130 RHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQV-----SEPDSVQSRNSSARLNAP 184
R E P PL WIVGYA C+ + + YR+ + SE D + S S +
Sbjct: 110 RRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQG 169
Query: 185 AAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGN 244
+ ++V A H NT F +W+++G
Sbjct: 170 DSSQYVTV-------------AKHLESANTM-------------------FSFIWWIIGF 197
Query: 245 VWI-FGGHSSAADAPNLYRLCIVFLA----ISCIGYAMPFILCATICCCLPCIVSILGLR 299
W+ GG + A D+P LY LCI+FL A+ ++ +CCCLPCI++IL
Sbjct: 198 YWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAIL--- 254
Query: 300 EDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGE 357
+A GA+ E ID L +KF+ D D + G G + GT+ E V+S E
Sbjct: 255 YAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACG-GIMTECGTDAPTEHVLSQE 313
Query: 358 DA-VCFCWTA 366
DA C C +A
Sbjct: 314 DAECCICLSA 323
>gi|297824629|ref|XP_002880197.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
gi|297326036|gb|EFH56456.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 28/265 (10%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
I ++++ L+ V + +L E+P PL WI+GY C+ + + YR+ ++
Sbjct: 85 IVLDVLWNLAFVFVTIAILGFSSDENPHVPLRFWIIGYNLQCLFHVGCVIAEYRRRHR-R 143
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
+ D + +S ++ + V+D + + L ++
Sbjct: 144 QSDDFPNEDSVLGSSSSHGSSEDESDDYAIVDDSQIEPGTS---------------LAKH 188
Query: 228 FKMALDCFFAVWFVVGNVWIFGGHSSAADA-PNLYRLCIVFLAISCI----GYAMPFILC 282
+ A F VW+++G W+ + + P LY LC+ FLA I A+ ++
Sbjct: 189 LESANAIFSFVWWIIGFYWVTADSEELSQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIG 248
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI+++L LA GA+ E I+ LP +KF ++ S N + G
Sbjct: 249 IAVCCCLPCIIAVLYA---LADRGGASDEEIERLPKFKFLTVRNSEKVNGEIRETHGGIM 305
Query: 342 GVVAAGTEKERVISGEDA---VCFC 363
+ + ERV+S ++A +C C
Sbjct: 306 TQLGVDSPTERVLSSDEAECCICLC 330
>gi|388514763|gb|AFK45443.1| unknown [Lotus japonicus]
Length = 145
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 67/87 (77%), Gaps = 4/87 (4%)
Query: 291 CIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK 350
C+VS+LG+RE L +T GAT+E+I+ALPTYKFK+KK +++++ + S++ +GG+VA GTEK
Sbjct: 17 CLVSVLGIREVLTETHGATSETINALPTYKFKMKKKKTTDESN--STVSEGGIVAKGTEK 74
Query: 351 ERVISGEDAVCFCWTAGF--NHEFRYL 375
ER++S EDAVC A + N E R L
Sbjct: 75 ERMVSKEDAVCCICLATYENNDELREL 101
>gi|356521151|ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 352
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 50/271 (18%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+++++ ++ VV V+L+ E P P+ WIVGYA C+ + L++ YR+ ++
Sbjct: 71 VALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRD 130
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
++R+ + + +S D R + + + +L+ L
Sbjct: 131 SHHGQRARDVESDAGSGDEDYS----------DDRDWSSGYSFTKRCELLNTGVSFL--- 177
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFI 280
W++VG W+ GG+ DAP LY L +VFL AI C+ + +
Sbjct: 178 -----------WWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCV--VLACL 224
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI++IL +A GA+ + LP Y+F++ +D D S G
Sbjct: 225 IGIALCCCLPCIIAIL---YAVAGQEGASEADLSMLPKYRFRIL-----SDEDKPSG-GA 275
Query: 341 GGVV-----AAGTEKERVISGEDA---VCFC 363
G +V +A ER + EDA +C C
Sbjct: 276 GSMVPIETSSAYLANERTLLPEDAECCICLC 306
>gi|301133542|gb|ADK63393.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 313
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 110/265 (41%), Gaps = 43/265 (16%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
I ++++ L+ V V V E PRAPL WIVGY C+ + + YR+
Sbjct: 32 IVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHIACVIAEYRRRESNR 91
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
+ DS S + + + + + V PI S
Sbjct: 92 DLDSGLSS-----VQGSSDGYGAEIESGNSVAK---PIESTNA----------------- 126
Query: 228 FKMALDCFFAVWFVVGNVWIFG-GHSSAADAPNLYRLCIVFLAISCI----GYAMPFILC 282
F VW+V+G W+ A +P LY LC+ FLA I A+ ++
Sbjct: 127 ------IFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIG 180
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF-KLKKSRSSNDRDNSSSIGDG 341
+CCCLPCI+++L LA GA+ E I+ LP +KF ++ S N + G
Sbjct: 181 IAVCCCLPCIIAVL---YALADREGASDEEIEKLPKFKFLTVRNSEKVNGEIRETRGGIM 237
Query: 342 GVVAAGTEKERVISGEDA---VCFC 363
+ + ERV+S ++A +C C
Sbjct: 238 TQLGVDSPSERVLSSDEAECCICLC 262
>gi|307135837|gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 63/294 (21%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSN--Q 165
+++++ L+ V ++ VL HE P P+ WIV YAA C+ + L+++ +++ N +
Sbjct: 78 VALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARR 137
Query: 166 VSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNT-GVLSPRFKVL 224
+ ++ Q + V S+ +D GGQ + ++ R + +
Sbjct: 138 ARDMETQQQQQPDG-----------YVTNESDEDD---------GGQRSLSSVAKRCESV 177
Query: 225 VEYFKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCA 283
+ +W++ G W+ GG+ +AP+LY L +VFLA +L
Sbjct: 178 NTLVSL-------IWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLAC 230
Query: 284 TI----CCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIG 339
I CCCLPCI++IL +A GAT + LP Y++++ N S G
Sbjct: 231 LIGIALCCCLPCIIAIL---YAVAGQEGATDADLSMLPKYRYRV---------SNEPSPG 278
Query: 340 DGGVVAAGTEK-----ERVISGEDAVCFCWTAGF-----------NHEFRYLVI 377
DG +V T ERV+ EDA C + + NH F Y I
Sbjct: 279 DGLMVPVETSSRYLTTERVLLREDAECCICLSPYEDGVELHALPCNHHFHYACI 332
>gi|297742577|emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 37/243 (15%)
Query: 137 PLFEWIVGYAAGCVATLPLLYWRYRQSNQV-----SEPDSVQSRNSSARLNAPAAPFSIS 191
PL WIVGYA C+ + + YR+ + SE D + S S + + ++
Sbjct: 2 PLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQGDSSQYVT 61
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGG 250
+ + E + +A H NT F +W+++G W+ GG
Sbjct: 62 LASLGD-ESSTSSVAKHLESANTM-------------------FSFIWWIIGFYWVSAGG 101
Query: 251 HSSAADAPNLYRLCIVFLAISCIGY----AMPFILCATICCCLPCIVSILGLREDLAQTR 306
+ A D+P LY LCI+FL A+ ++ +CCCLPCI++IL +A
Sbjct: 102 QALARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAIL---YAVADQE 158
Query: 307 GATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGEDA-VCFC 363
GA+ E ID L +KF+ D D + G G + GT+ E V+S EDA C C
Sbjct: 159 GASKEDIDQLSRFKFRKVGDIEKIDGDIQGACG-GIMTECGTDAPTEHVLSQEDAECCIC 217
Query: 364 WTA 366
+A
Sbjct: 218 LSA 220
>gi|357495165|ref|XP_003617871.1| RING finger protein [Medicago truncatula]
gi|355519206|gb|AET00830.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 147/341 (43%), Gaps = 71/341 (20%)
Query: 43 SSNSTHDRTSNGLDSTRHEDGSSGSSR-NPTSQPSTSVNG----SNTRNVAFTRR----- 92
+SNS +SN TR E S +R S PS SV S +R RR
Sbjct: 8 NSNSIVQSSSNS--ETREERVVSSRNRPQHASSPSFSVRMAMRISRSRWFTLLRRVFHYQ 65
Query: 93 --GESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCV 150
S +P NS W+ +E + + Q++ + L + + E P P+ WI GY GCV
Sbjct: 66 NGSRSNLGSNPFNSSTWLMMEFIALIIQIIISTFTLVISKREKPVWPMRIWISGYDIGCV 125
Query: 151 ATLPLLYWRYRQ-----SNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPI 205
L +Y RYRQ + +S D Q RNS SV R S
Sbjct: 126 LNLLTVYGRYRQIYLIQGDALSLSDIEQQRNSG----------ETSVYRMSH-------- 167
Query: 206 ASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWF-VVGNVWIFGGH-SSAADAPNLYRL 263
L+ + +L+ FFA+W V+GNVW+F S AP L+ L
Sbjct: 168 ------------------LMNKCRTSLEFFFAIW-FVMGNVWVFDSRFGSFQQAPKLHVL 208
Query: 264 CIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQT-RGATAESIDALPTYKFK 322
CI L + I Y+ PF+L +CCC+P I ++LG ++A + +GA+ E I LP+++ K
Sbjct: 209 CITLLTWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNIASSNKGASDEQISQLPSWRHK 268
Query: 323 LKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFC 363
+ ++S SI E+ I+ + C C
Sbjct: 269 EPHATKLELGNDSESI------------EKFINEDPECCIC 297
>gi|297737629|emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 43/242 (17%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
E P P+ WI GYA C + L++ YR+ N+ D Q + S S
Sbjct: 8 ERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQ---------HSDS 58
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIF-GG 250
SE ED +S GG N ++ R + + +W++VG W+ GG
Sbjct: 59 DVNDSEDEDGN---SSASGGFNQSSVTKRCESVNTMASF-------LWWIVGFYWVVSGG 108
Query: 251 HSSAADAPNLYRLCIVFL------AISCIGYAMPFILCATICCCLPCIVSILGLREDLAQ 304
+ +AP LY L +VFL AI C+ A ++ +CCCLPCI++IL +A
Sbjct: 109 EALLQNAPRLYWLAVVFLAFDVFFAIFCVVLAC--LIGIALCCCLPCIIAIL---YAVAG 163
Query: 305 TRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTE-----KERVISGEDA 359
GA+ + LP Y+F+ + + S +G G ++ T ER++ EDA
Sbjct: 164 QEGASEADLSMLPRYRFE-------ANNEEKSGVGAGTMIPTETSSGYLANERILLPEDA 216
Query: 360 VC 361
C
Sbjct: 217 EC 218
>gi|79342958|ref|NP_172736.2| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75335230|sp|Q9LN71.1|RING1_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g12760; AltName:
Full=RING finger protein At1g12760
gi|9502381|gb|AAF88088.1|AC025417_16 T12C24.29 [Arabidopsis thaliana]
gi|22531064|gb|AAM97036.1| unknown protein [Arabidopsis thaliana]
gi|23198142|gb|AAN15598.1| unknown protein [Arabidopsis thaliana]
gi|67037431|gb|AAY63561.1| RING domain protein [Arabidopsis thaliana]
gi|332190803|gb|AEE28924.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 408
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 28/273 (10%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ +++V L+ V A +L + R EHP PL W++GYA CV + + YR+ N+
Sbjct: 101 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 160
Query: 168 EPDSVQSRNSSARLNAPAAPF------SISVPRTSEVEDHRAPIASHRGGQNTGVLSPRF 221
+ + +R ++ ++ ++ R S V+D + G L
Sbjct: 161 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQD-----------LSLGHLDTES 209
Query: 222 KVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYA 276
+ ++ + A F +W+++G W+ GG A ++P +Y L I + A
Sbjct: 210 SSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVA 269
Query: 277 MPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSS 336
+ ++ +CCCLPCI+++L +A GA+ E I+ L +KF+ + + D +
Sbjct: 270 LACVIGIAVCCCLPCIIAVL---YAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQ 326
Query: 337 SIGDGGVVAAGTEK--ERVISGEDA-VCFCWTA 366
+G + GT+ E + EDA C C +A
Sbjct: 327 GTTEGIMTECGTDSPIEHTLLQEDAECCICLSA 359
>gi|168003471|ref|XP_001754436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694538|gb|EDQ80886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 34/264 (12%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++L+ L+ V ++ VL + + E L WI+GYA CV + + Y + Q
Sbjct: 49 VVLDLIWNLAFVQVSLAVLVLSKKETNCNELRIWIIGYALQCVVHMLCVCCEYLRRQQ-- 106
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIAS---HRGGQNTGVLSPRFKVL 224
++NA + S S + + + + S G N + R +
Sbjct: 107 ------------QVNANPSSVSSSNSTYAPINNGENDVDSGFDDDGLSNEASWAKRLESA 154
Query: 225 VEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGY----AMPF 279
F VW+VVG WI GG S A DAP +Y LC++FL A+
Sbjct: 155 NTMFSF-------VWWVVGFYWITAGGQSLAVDAPYVYWLCVLFLTFDVFFVVFCVALAC 207
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIG 339
++ +CCCLPCI++IL +A GA+ E I+ LPT KF+ S + ++
Sbjct: 208 VIGIAVCCCLPCIIAIL---YAVADQEGASEEDINNLPTAKFRKISSDGKITANYERALA 264
Query: 340 DGGVVAAGTEK--ERVISGEDAVC 361
+E ER + +DA C
Sbjct: 265 GVMTFVGASENLTERSLFEDDAEC 288
>gi|297840183|ref|XP_002887973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333814|gb|EFH64232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 113/282 (40%), Gaps = 56/282 (19%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRY------- 160
+ ++ V L+ V A VL + E+P PL W++GY C+ + + Y
Sbjct: 75 VVLDFVWNLAFVAVATAVLVLSSDENPNMPLRVWVIGYGLQCMMHMVCVCVEYRRRNSRR 134
Query: 161 -------RQSNQVSEPDSVQ-SRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQ 212
S+ + E D + SRNS R ++E+ A H
Sbjct: 135 RRDMSPRSSSSSMEEEDGLGLSRNSDDRY-----------LELGQLENENNSFAKHLESA 183
Query: 213 NTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VF 267
NT ++ + +W+V+G W+ GG A +P LY LCI
Sbjct: 184 NT---------MISF----------IWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFD 224
Query: 268 LAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSR 327
+ A+ ++ +CCCLPCI+++L +A+ GA+ E ID L +KF+
Sbjct: 225 VFFVVFCVALACVIGIAVCCCLPCIIAVL---YAVAEQEGASKEDIDQLTKFKFRKVGDS 281
Query: 328 SSNDRDNSSSIGDGGVVAAGTEK--ERVISGEDA-VCFCWTA 366
+ D G + GT+ E + EDA C C +A
Sbjct: 282 VKHTVDEEQGDSGGLMTECGTDSPVEHTLPHEDAECCICLSA 323
>gi|79317862|ref|NP_001031032.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|222424260|dbj|BAH20087.1| AT1G12760 [Arabidopsis thaliana]
gi|332190804|gb|AEE28925.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 28/273 (10%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ +++V L+ V A +L + R EHP PL W++GYA CV + + YR+ N+
Sbjct: 30 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 89
Query: 168 EPDSVQSRNSSARLNAPAAPF------SISVPRTSEVEDHRAPIASHRGGQNTGVLSPRF 221
+ + +R ++ ++ ++ R S V+D + G L
Sbjct: 90 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQD-----------LSLGHLDTES 138
Query: 222 KVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYA 276
+ ++ + A F +W+++G W+ GG A ++P +Y L I + A
Sbjct: 139 SSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVA 198
Query: 277 MPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSS 336
+ ++ +CCCLPCI+++L +A GA+ E I+ L +KF+ + + D +
Sbjct: 199 LACVIGIAVCCCLPCIIAVL---YAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQ 255
Query: 337 SIGDGGVVAAGTEK--ERVISGEDA-VCFCWTA 366
+G + GT+ E + EDA C C +A
Sbjct: 256 GTTEGIMTECGTDSPIEHTLLQEDAECCICLSA 288
>gi|297844168|ref|XP_002889965.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335807|gb|EFH66224.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 22/269 (8%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ +++V L+ V A +L + R+EHP PL W++GYA CV + + YR+ N
Sbjct: 30 VVLDIVWNLAFVSVATAILVMSRNEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRN--- 86
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQN--TGVLSPRFKVLV 225
R ++ P + S S +S +E+ + G Q+ G L +
Sbjct: 87 ------RRRTNRTTTTPRSRSSSSSSSSSSLEEDALGSRRNSGEQDLSLGHLDTESSSVA 140
Query: 226 EYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFI 280
++ + A F +W+++G W+ GG A ++P +Y L I + A+ +
Sbjct: 141 KHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACV 200
Query: 281 LCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD 340
+ +CCCLPCI+++L +A GA+ E I+ L +KF+ + + D + +
Sbjct: 201 IGIAVCCCLPCIIAVL---YAVADQEGASKEDIEQLTKFKFRKVGDANRHTGDEAQGTTE 257
Query: 341 GGVVAAGTEK--ERVISGEDA-VCFCWTA 366
G + GT+ E + EDA C C +A
Sbjct: 258 GIMTECGTDSPIEHTLLQEDAECCICLSA 286
>gi|30677954|ref|NP_849924.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
gi|75299491|sp|Q8GUU2.1|RIE1_ARATH RecName: Full=E3 ubiquitin protein ligase RIE1; AltName:
Full=Protein RING-FINGER FOR EMBRYOGENESIS 1
gi|27372067|gb|AAN87884.1| RES protein [Arabidopsis thaliana]
gi|330250396|gb|AEC05490.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
Length = 359
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 108/267 (40%), Gaps = 50/267 (18%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLL---YWRYRQSN 164
++ +++ + V+++ V+L E P P+ WI Y C+ + L+ YWR
Sbjct: 78 VAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR----- 132
Query: 165 QVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVL 224
RNS+ R R E DH + Q++ S + +
Sbjct: 133 ----------RNSTRR------------ARDLESYDHEDYNIEYDYEQDSDDNSTTYSFV 170
Query: 225 VEYFKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCA 283
+ F +W+++G W+ GG +APNLY L ++FLAI +L
Sbjct: 171 KRCESINTVISF-IWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLAC 229
Query: 284 TI----CCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIG 339
+ CCCLPCI+++L +A T G + + LP YKFK S N G
Sbjct: 230 LVGIALCCCLPCIIALL---YAVAGTEGVSEAELGVLPLYKFKAFHSNEKN------ITG 280
Query: 340 DGGVV-----AAGTEKERVISGEDAVC 361
G +V ER + EDA C
Sbjct: 281 PGKMVPIPINGLCLATERTLLAEDADC 307
>gi|297603205|ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group]
gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group]
gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group]
Length = 267
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 98/238 (41%), Gaps = 30/238 (12%)
Query: 137 PLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTS 196
PL W+ GYA CV + + YR R APA+ S
Sbjct: 2 PLRTWVAGYALQCVVHMVCVAIEYRMRR-------------GQRDRAPASADEERGSDGS 48
Query: 197 EVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAA 255
R G T +S + ++ + A F +W+++G WI GG
Sbjct: 49 SSSSDDDVTEDDRRGSCTDCVS-----IAKHLESANTMFSFIWWIIGFYWISAGGEDVIR 103
Query: 256 DAPNLYRLCIVFLAISCIGYAM----PFILCATICCCLPCIVSILGLREDLAQTRGATAE 311
DAP LY LCIVFLA I+ +CCCLPCI++IL D GA+ +
Sbjct: 104 DAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSD---QEGASED 160
Query: 312 SIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGEDA-VCFCWTA 366
I +P YKF+ D + G G + GT + E+V++ EDA C C +A
Sbjct: 161 DIRQIPRYKFRRTDEPEKQTADETGPFG-GIMTECGTNQPIEKVLAPEDAECCICLSA 217
>gi|242086537|ref|XP_002439101.1| hypothetical protein SORBIDRAFT_09g000505 [Sorghum bicolor]
gi|241944386|gb|EES17531.1| hypothetical protein SORBIDRAFT_09g000505 [Sorghum bicolor]
Length = 70
Score = 72.0 bits (175), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 264 CIVFLAISCIGYAMPFILCATICCCLPCIVSILGLRE 300
CIVFL SCIGYAMP+ILCA I CCLPCI+S++G RE
Sbjct: 7 CIVFLTFSCIGYAMPYILCAMIFCCLPCIISVMGFRE 43
>gi|449453127|ref|XP_004144310.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449488257|ref|XP_004157983.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 347
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 111/275 (40%), Gaps = 57/275 (20%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+ ++L L V +V+VL + E P APL W+ GYA C+ + ++ Y +
Sbjct: 76 LVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR----- 130
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSP-RFKVLVE 226
R+S RL +RG Q+ LS R +V+
Sbjct: 131 -------RSSRYRLGF-----------------------ENRGAQDELRLSHNRIRVMKR 160
Query: 227 YFKMALDCFFA-VWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA------ISCIGYAMP 278
AL+ A +W+V G WI GG + +P LY L +VFLA I C G M
Sbjct: 161 L--EALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTG--MA 216
Query: 279 FILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI 338
F+ +CC +P L + GA+ + I ALP Y+F S D D +
Sbjct: 217 FVGFFAVCCIIP----FLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEV 272
Query: 339 G---DGGVVAAGTEKERVISGEDAVCFCWTAGFNH 370
G + G G E ++ ED+ C A + H
Sbjct: 273 GMTLEPGY--NGHTTEHTLNAEDSACCICLAQYVH 305
>gi|414589110|tpg|DAA39681.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 199
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 14/147 (9%)
Query: 224 LVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA------ISCIGYA 276
+V++ + A F +W+++G W+ GG + + DAP LY L IVFLA + CI A
Sbjct: 4 IVKHLESANTMFSFIWWILGFYWVSAGGQALSHDAPQLYWLTIVFLAFDVFFVVFCI--A 61
Query: 277 MPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSS 336
+ ++ +CCCLPCI+ IL D Q GA+ + ++ L +KF+ ++
Sbjct: 62 LACVIGIAVCCCLPCIIGILYAVTD--QEEGASEDDVNNLSKFKFRTMSDADKLAAGIAA 119
Query: 337 SIGDGGVVAAGTEK--ERVISGEDAVC 361
+G G + GT E ++S EDA C
Sbjct: 120 PVG-GVMTECGTNPPVEHILSAEDAEC 145
>gi|18407748|ref|NP_564810.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|122064956|sp|Q8LDB8.2|RING2_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g63170; AltName:
Full=RING finger protein At1g63170
gi|12323245|gb|AAG51597.1|AC010795_1 hypothetical protein; 76801-78300 [Arabidopsis thaliana]
gi|332195943|gb|AEE34064.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 381
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 64/266 (24%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRY--------------------RQSNQVSEPDS 171
E+P PL WI+GY C+ + + Y S+ + E +
Sbjct: 99 ENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEG 158
Query: 172 VQ-SRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKM 230
+ SRNS R ++E+ A H NT ++ +
Sbjct: 159 LGLSRNSDER-----------YLELGQLENENNSFAKHLESANT---------MISF--- 195
Query: 231 ALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFILCATI 285
+W+V+G W+ GG A +P LY LCI + A+ ++ +
Sbjct: 196 -------IWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAV 248
Query: 286 CCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD-GGVV 344
CCCLPCI+++L +A+ GA+ E ID L +KF+ + D GD GGV+
Sbjct: 249 CCCLPCIIAVLYA---VAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVM 305
Query: 345 A-AGTEK--ERVISGEDA-VCFCWTA 366
GT+ E + EDA C C +A
Sbjct: 306 TECGTDSPVEHALPHEDAECCICLSA 331
>gi|16604388|gb|AAL24200.1| At1g63170/F16M19_7 [Arabidopsis thaliana]
Length = 381
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 64/266 (24%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRY--------------------RQSNQVSEPDS 171
E+P PL WI+GY C+ + + Y S+ + E +
Sbjct: 99 ENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEG 158
Query: 172 VQ-SRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKM 230
+ SRNS R ++E+ A H NT ++ +
Sbjct: 159 LGLSRNSDER-----------YLELGQLENENNSFAKHLESANT---------MISF--- 195
Query: 231 ALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFILCATI 285
+W+V+G W+ GG A +P LY LCI + A+ ++ +
Sbjct: 196 -------IWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAV 248
Query: 286 CCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD-GGVV 344
CCCLPCI+++L +A+ GA+ E ID L +KF+ + D GD GGV+
Sbjct: 249 CCCLPCIIAVL---YAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVM 305
Query: 345 A-AGTEK--ERVISGEDA-VCFCWTA 366
GT+ E + EDA C C +A
Sbjct: 306 TECGTDSPVEHALPHEDAECCICLSA 331
>gi|21554228|gb|AAM63303.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 64/266 (24%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRY--------------------RQSNQVSEPDS 171
E+P PL WI+GY C+ + + Y S+ + E +
Sbjct: 99 ENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEG 158
Query: 172 VQ-SRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKM 230
+ SRNS R ++E+ A H NT ++ +
Sbjct: 159 LGLSRNSDER-----------YLELGQLENENNSFAKHLESANT---------MISF--- 195
Query: 231 ALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI----VFLAISCIGYAMPFILCATI 285
+W+V+G W+ GG A +P LY LCI + A+ ++ +
Sbjct: 196 -------IWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAV 248
Query: 286 CCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGD-GGVV 344
CCCLPCI+++L +A+ GA+ E ID L +KF+ + D GD GGV+
Sbjct: 249 CCCLPCIIAVLYA---VAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGEGDSGGVM 305
Query: 345 A-AGTEK--ERVISGEDA-VCFCWTA 366
GT+ E + EDA C C +A
Sbjct: 306 TECGTDSPVEHALPHEDAECCICLSA 331
>gi|195610766|gb|ACG27213.1| hypothetical protein [Zea mays]
gi|195624986|gb|ACG34323.1| hypothetical protein [Zea mays]
gi|413926541|gb|AFW66473.1| hypothetical protein ZEAMMB73_193126 [Zea mays]
Length = 35
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 31/33 (93%)
Query: 230 MALDCFFAVWFVVGNVWIFGGHSSAADAPNLYR 262
MALDCFFAVWFVVGNVW+F GHSSA DAPNLYR
Sbjct: 1 MALDCFFAVWFVVGNVWVFDGHSSAHDAPNLYR 33
>gi|297844468|ref|XP_002890115.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335957|gb|EFH66374.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 113/280 (40%), Gaps = 82/280 (29%)
Query: 18 PLLMERPENVNNCEHIIDITITDVSSSNSTHDRTSNGLDSTRHEDGSSGSSRNPTSQPST 77
PLL + NV+ D+T SSSN H +D T ++D SS ++ P
Sbjct: 4 PLLTKGEHNVD------DVTTHGDSSSNEEH-----IVDVTTNDDSSSADAQTPHEDVQW 52
Query: 78 SVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAP 137
SV FT R + I VE V+ L Q+V+A+VVL++ + E P
Sbjct: 53 SV--------VFTFRN------------VLILVEFVVALVQIVAAIVVLTLTKDEQPPQK 92
Query: 138 LF-EWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTS 196
+F I+ Y C+A LP+L R+ Q RN S+ R
Sbjct: 93 MFPTLILSYTGCCIAALPILGLRFWQ----------YYRNVSSE------------TRIY 130
Query: 197 EVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAD 256
EV D+ K ++EY FF W VV W +S++ D
Sbjct: 131 EVVDN-------------------LKKILEY-------FFVGWVVVL-FWHLINNSASLD 163
Query: 257 -APNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSI 295
A LC+ FLAISCI + + CA IC P I+ +
Sbjct: 164 IATQQLWLCMAFLAISCILHVFRNLPCAAICFLYPMILRL 203
>gi|302758464|ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 130 RHEHPRAPLFEWIVGYAAGCVATLPLLYWRY-RQSNQVSEPDSVQSRNSSARLNAPAAPF 188
+ E P PL WIVGYA C+ + + Y R+ ++ S + N+ A L+A +
Sbjct: 100 KEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVAHLSAGS--- 156
Query: 189 SISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI- 247
SE++ + +H LS R + F VW+V+G WI
Sbjct: 157 ------ESEID-----MEAHS-------LSKRLESANTMFSF-------VWWVIGFYWIT 191
Query: 248 FGGHSSAADAPNLYRLC----IVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLA 303
GG + +P LY L + A+ ++ +CCCLPCI++IL +A
Sbjct: 192 AGGQALTQHSPRLYWLSVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAIL---YAVA 248
Query: 304 QTRGATAESIDALPTYKFKLKKSRSS---NDRDNSSSIGDGGVVA----AGTEKERVISG 356
GA+ E I+ +P +KF+ S + D + S+ GG++A + ER +S
Sbjct: 249 DQEGASEEDINLIPRFKFRRSGSIDTCIIEKADKAPSL--GGIMALVGSSDPSSERGLSS 306
Query: 357 EDAVC 361
EDA C
Sbjct: 307 EDAEC 311
>gi|302797352|ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 44/244 (18%)
Query: 130 RHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFS 189
+ E P PL WIVGYA C+ + + YR+ L + P
Sbjct: 100 KEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRR-------------RRRILRGGSGPAE 146
Query: 190 ISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-F 248
+V S + + +H LS R + F VW+V+G WI
Sbjct: 147 NTVGHLSAGSESEIDMEAHS-------LSKRLESANTMFSF-------VWWVIGFYWITA 192
Query: 249 GGHSSAADAPNLYRLC----IVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQ 304
GG + +P LY L + A+ ++ +CCCLPCI++IL +A
Sbjct: 193 GGQALTQHSPRLYWLSVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAIL---YAVAD 249
Query: 305 TRGATAESIDALPTYKFKLKKSRSS---NDRDNSSSIGDGGVVA----AGTEKERVISGE 357
GA+ E I+ +P +KF+ S + D + S+ GG++A + ER +S E
Sbjct: 250 QEGASEEDINLIPRFKFRRSGSIDTCIIEKADKAPSL--GGIMALVGSSDPSSERGLSSE 307
Query: 358 DAVC 361
DA C
Sbjct: 308 DAEC 311
>gi|222623429|gb|EEE57561.1| hypothetical protein OsJ_07906 [Oryza sativa Japonica Group]
Length = 231
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 212 QNTGVLSPR-----FKVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCI 265
++ G +PR + + ++ + A F +W+++G W+ GG DAP LY LCI
Sbjct: 18 EDAGERAPRGRNGDYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCI 77
Query: 266 VFLAISCIGYAM----PFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF 321
VFLA I+ +CCCLPCI++IL D GA+ + I +P YKF
Sbjct: 78 VFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKF 134
Query: 322 KLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGEDA-VCFCWTA 366
+ + + S G G ++ GT + E+V++ EDA C C +A
Sbjct: 135 RRMDEPEKQSVNMTGSSG-GIMIECGTNQPIEKVLAAEDAECCICLSA 181
>gi|218191343|gb|EEC73770.1| hypothetical protein OsI_08445 [Oryza sativa Indica Group]
Length = 213
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 224 LVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAMPF--- 279
+ ++ + A F +W+++G W+ GG DAP LY LCIVFLA
Sbjct: 74 IAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALA 133
Query: 280 -ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI 338
I+ +CCCLPCI++IL D GA+ + I +P YKF+ + + S
Sbjct: 134 CIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGSS 190
Query: 339 GDGGVVAAGTEK--ERVISGEDAV 360
G G ++ GT + E+V++ EDAV
Sbjct: 191 G-GIMIECGTNQPIEKVLAAEDAV 213
>gi|29367335|gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
Length = 250
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 235 FFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM----PFILCATICCCL 289
F +W+++G WI GG DAP LY LCIVFLA I+ +CCCL
Sbjct: 65 FSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCL 124
Query: 290 PCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTE 349
PCI++IL D GA+ + I +P YKF+ D + G G + GT
Sbjct: 125 PCIIAILYAVSD---QEGASEDDIRQIPRYKFRRTDEPEKQTADETGPFG-GIMTECGTN 180
Query: 350 K--ERVISGEDA-VCFCWTA 366
+ E+V++ EDA C C +A
Sbjct: 181 QPIEKVLAPEDAECCICLSA 200
>gi|224108271|ref|XP_002314782.1| predicted protein [Populus trichocarpa]
gi|222863822|gb|EEF00953.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 22/136 (16%)
Query: 238 VWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCLP 290
+W++VG W+ GG + +AP LY L +VFLA I C+ + ++ +CCCLP
Sbjct: 122 LWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLAFDVFFAIFCV--VLACLIGIALCCCLP 179
Query: 291 CIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK 350
CI++IL +A GA+ + LP YK+ + + R +G G +V T
Sbjct: 180 CIIAIL---YAVAGQEGASEADLSILPKYKYLVMGNEEKRPR-----VGAGKMVPVETSS 231
Query: 351 -----ERVISGEDAVC 361
ERV+ EDA C
Sbjct: 232 GYLSTERVLLPEDAEC 247
>gi|226503415|ref|NP_001151256.1| protein binding protein [Zea mays]
gi|195645358|gb|ACG42147.1| protein binding protein [Zea mays]
Length = 359
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 95/242 (39%), Gaps = 54/242 (22%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
E P PL WIVGY C+ + + YR+ + ++ +
Sbjct: 113 ERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRRNADQEGAGD----------------- 155
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGG 250
ED + I H NT F +W++VG W+ GG
Sbjct: 156 -------EDLKLSIVKHLESANTM-------------------FSFIWWIVGFYWVSAGG 189
Query: 251 HSSAADAPNLYRLCIVFLAISCIGYAMPF----ILCATICCCLPCIVSILGLREDLAQTR 306
+ + DAP LY L IVFLA ++ +CCCLPCI++IL D
Sbjct: 190 KALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQVSQE 249
Query: 307 GATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGEDA---VC 361
GA+ + I+ L +KF+ ++ +G G + GT E ++S EDA +C
Sbjct: 250 GASEDDINNLSKFKFQTMSDADKLAAGIAAPVG-GVMTECGTNPPVEHILSAEDAECCIC 308
Query: 362 FC 363
C
Sbjct: 309 LC 310
>gi|414884508|tpg|DAA60522.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 359
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 102/265 (38%), Gaps = 62/265 (23%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
E P PL WIVGY C+ + + YR+ + ++ +
Sbjct: 113 ERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRRNADQEGAGD----------------- 155
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGG 250
ED + I H NT F +W++VG W+ GG
Sbjct: 156 -------EDLKLSIVKHLESANT-------------------MFSFIWWIVGFYWVSAGG 189
Query: 251 HSSAADAPNLYRLCIVFLAISCIGYAMPF----ILCATICCCLPCIVSILGLREDLAQTR 306
+ + DAP LY L IVFLA ++ +CCCLPCI++IL D
Sbjct: 190 KALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQVSQE 249
Query: 307 GATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGEDA---VC 361
GA+ + I+ L +KF+ ++ +G G + GT E ++S EDA +C
Sbjct: 250 GASEDDINNLSKFKFQTMSDADKLAAGIAAPVG-GVMTECGTNPPVEHILSAEDAECCIC 308
Query: 362 FC-WTAGF-------NHEFRYLVID 378
C + G NH F ID
Sbjct: 309 LCPYEDGVELRELPCNHHFHCSCID 333
>gi|168064697|ref|XP_001784296.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664172|gb|EDQ50902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 235 FFAVWFVVGNVWI-FGGHSSAADAPNLYRLC----IVFLAISCIGYAMPFILCATICCCL 289
F VW++VG WI GG S A DAP++Y LC + A+ ++ +CCCL
Sbjct: 111 FSFVWWIVGFYWITAGGQSLAVDAPHVYWLCVVFLAFDVFFVVFCVALACVIGIAVCCCL 170
Query: 290 PCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVV----A 345
PCI++IL +A GA+ E I+ LP+ KF+ S D + GV+ A
Sbjct: 171 PCIIAIL---YAVADQEGASEEDINNLPSAKFRKIYSDGKGKGDTERPL--AGVMTFVGA 225
Query: 346 AGTEKERVISGEDAVC 361
+ ER + +DA C
Sbjct: 226 SANLTERSLFEDDAEC 241
>gi|226501326|ref|NP_001149757.1| LOC100283384 [Zea mays]
gi|195632056|gb|ACG36686.1| protein binding protein [Zea mays]
gi|413938751|gb|AFW73302.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413938752|gb|AFW73303.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 367
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 133/324 (41%), Gaps = 62/324 (19%)
Query: 65 SGSSRNPTSQPSTSVNGSNTRNV---AFTRRGES------------RRRRSPLNSGLWIS 109
+ SS +P S P ++V S + A RRG S RRR +S ++
Sbjct: 28 AASSGDPASPPPSAVRPSRLAALIGRAAGRRGPSMLVRETAALQLQRRRADWAHSRPVLA 87
Query: 110 VELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEP 169
+++ ++ +A VLS E P PL W+VGYAA C+ + L+ ++
Sbjct: 88 LDIAWNVAFAAAAAAVLSSSAEESPVKPLRLWVVGYAAQCLVHVGLV---------CADT 138
Query: 170 DSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFK 229
R + + +A +D RA S G+ L+ +
Sbjct: 139 RRETRRARRSASDVESAGAGTDSSDADSEDDERAEGRSSYTGRCE-----TMNTLISFL- 192
Query: 230 MALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFILC 282
W+++G WIF GG AP LY L IVFL A+ C+ A FI
Sbjct: 193 ---------WWIIGFYWIFSGGEVLEHGAPRLYWLTIVFLAFDVFFAVFCVAVAC-FIGI 242
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
A +CCCLPC+++IL LA GA+ I L Y++ S D + +G
Sbjct: 243 A-LCCCLPCVIAIL---YALAGQEGASDADISVLLRYRY------SDPSEDGEKGVDEGL 292
Query: 343 VV-----AAGTEKERVISGEDAVC 361
++ + + ER++ EDA C
Sbjct: 293 MIPILNNSGMSTSERILLREDAEC 316
>gi|413923426|gb|AFW63358.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 205
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 235 FFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM----PFILCATICCCL 289
F VW+++G W+ GG DAP LY LCIVFLA I+ +CCCL
Sbjct: 20 FSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCL 79
Query: 290 PCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTE 349
PCI++IL D GA+ + I +P YKF+ + S G G ++ GT
Sbjct: 80 PCIIAILYAVSD---QEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSG-GIMIECGTN 135
Query: 350 K--ERVISGEDA-VCFCWTA 366
+ E+V++ EDA C C +A
Sbjct: 136 QPIEKVLAAEDAECCICLSA 155
>gi|357138212|ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 93/237 (39%), Gaps = 34/237 (14%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
E P PL W+VGYA CV + L+ + + + + +A NA
Sbjct: 107 ESPAKPLRLWLVGYALQCVVHVSLVCSGPGRRRRAARARGPDVESDAA--NAGPDGSGSE 164
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIF-GG 250
E D R+ NT LV + W+++G W+ GG
Sbjct: 165 DDDDEEAMDERSSSVERCESVNT---------LVSFL----------WWIIGFYWVVSGG 205
Query: 251 HSSAADAPNLYRLCIVFL------AISCIGYAMPFILCATICCCLPCIVSILGLREDLAQ 304
AP LY L +VFL A+ C+ A FI A +CCCLPC+V+IL L
Sbjct: 206 DMLEQGAPRLYWLTVVFLAFDVFFAVFCVAVAC-FIGVA-LCCCLPCVVAIL---YALVG 260
Query: 305 TRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVC 361
GA+ I LP YK+ + D I A T ER++ EDA C
Sbjct: 261 QEGASDADIGVLPRYKYSVANEDVEKGTDEGLMIPILNNSGAST-SERILLNEDAEC 316
>gi|242043882|ref|XP_002459812.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
gi|241923189|gb|EER96333.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
Length = 357
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 102/265 (38%), Gaps = 64/265 (24%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
E P PL WI GY C+ + + YR+ ++ ++ +
Sbjct: 113 ESPAVPLRVWIAGYVLQCLLHILCVTVEYRRRSRDADQEGAGD----------------- 155
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGG 250
ED + + H NT F +W++VG W+ GG
Sbjct: 156 -------EDFKLSVVKHLESANTM-------------------FSFIWWIVGFYWVSAGG 189
Query: 251 HSSAADAPNLYRLCI----VFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTR 306
+ + DAP LY L I + A+ ++ +CCCLPCI++IL D Q
Sbjct: 190 QALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTD--QQE 247
Query: 307 GATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGEDA---VC 361
GA+ + I+ L +KF+ ++ +G G + GT E ++S EDA +C
Sbjct: 248 GASEDDINNLSKFKFRTMSDADKLAAGIAAPVG-GVMTECGTNPPVEHILSAEDAECCIC 306
Query: 362 FC-WTAGF-------NHEFRYLVID 378
C + G NH F ID
Sbjct: 307 LCPYEDGVELRELPCNHHFHCSCID 331
>gi|326489597|dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 99/243 (40%), Gaps = 47/243 (19%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYW--RYRQSNQVSEPDSVQSRNSSARLNAPAAPFS 189
E P PL W+VGYA CV + L+ R R + PD ++S ++A N+ +
Sbjct: 109 ESPGKPLRLWLVGYALQCVVHVSLVCSGSRRRPAAPARGPD-IESGAATAGANSSESDEG 167
Query: 190 ISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIF- 248
E + RA NT +V + W+++G W+
Sbjct: 168 ----NDEEAMEERASSTDRCESVNT---------MVSFL----------WWIIGFYWVVT 204
Query: 249 GGHSSAADAPNLYRLCIVFLAISCIGYAMPFI----LCATICCCLPCIVSILGLREDLAQ 304
GG AP LY L +VFLA + + +CCCLPC+V+IL L
Sbjct: 205 GGDVLEQGAPRLYWLTVVFLAFDVFFAVFCVVVACFIGVALCCCLPCVVAIL---YALVG 261
Query: 305 TRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVV------AAGTEKERVISGED 358
GA+ I LP YK+ S+ +N D GV+ + + ER++ ED
Sbjct: 262 QEGASDADIGVLPRYKY-------SDPSENGEKGTDEGVMIPILNNSGTSTSERILLRED 314
Query: 359 AVC 361
A C
Sbjct: 315 AEC 317
>gi|323388655|gb|ADX60132.1| WRKY transcription factor [Zea mays]
gi|414884506|tpg|DAA60520.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 103/265 (38%), Gaps = 64/265 (24%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
E P PL WIVGY C+ + + YR+ + ++ +
Sbjct: 113 ERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRRNADQEGAGD----------------- 155
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGG 250
ED + I H NT F +W++VG W+ GG
Sbjct: 156 -------EDLKLSIVKHLESANT-------------------MFSFIWWIVGFYWVSAGG 189
Query: 251 HSSAADAPNLYRLCIVFLAISCIGYAMPF----ILCATICCCLPCIVSILGLREDLAQTR 306
+ + DAP LY L IVFLA ++ +CCCLPCI++IL D Q
Sbjct: 190 KALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTD--QQE 247
Query: 307 GATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGEDA---VC 361
GA+ + I+ L +KF+ ++ +G G + GT E ++S EDA +C
Sbjct: 248 GASEDDINNLSKFKFQTMSDADKLAAGIAAPVG-GVMTECGTNPPVEHILSAEDAECCIC 306
Query: 362 FC-WTAGF-------NHEFRYLVID 378
C + G NH F ID
Sbjct: 307 LCPYEDGVELRELPCNHHFHCSCID 331
>gi|116830883|gb|ABK28398.1| unknown [Arabidopsis thaliana]
Length = 246
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 113/279 (40%), Gaps = 80/279 (28%)
Query: 21 MERPENVNNCEHIID-ITITDVSSSNSTH--DRTSNGLDSTRHEDGSSGSSRNPTSQPST 77
ME P + EHI+D +TI SSSN H D T+NG S+ E +P
Sbjct: 1 MEDPL-LTQSEHIVDDVTIHGDSSSNEEHIVDVTTNGNPSSADE-----------KRPHE 48
Query: 78 SVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAP 137
V S+ FT + + I VE V+ L Q+V+A+VVL++ + E P
Sbjct: 49 GVQWSDI----FTF------------TTVCILVEFVVALVQIVAAIVVLTLAKDEQPPQK 92
Query: 138 LF-EWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTS 196
+F I+ Y C+ATLP+L R+ S + SV + R
Sbjct: 93 MFPTLILSYTGCCIATLPILGLRFWHSYR-----SVSTET-----------------RIY 130
Query: 197 EVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAD 256
EV V+ K L+ FF W VV + SS +
Sbjct: 131 EV--------------------------VDILKKMLEYFFVGWVVVLLWHLINNSSSIDN 164
Query: 257 APNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSI 295
+ LC+ FLAISCI + + + CA +C P I+ +
Sbjct: 165 TTQQFWLCMTFLAISCILHVLRNLPCAGVCFLYPMILYL 203
>gi|145335750|ref|NP_173015.2| uncharacterized protein [Arabidopsis thaliana]
gi|91805793|gb|ABE65625.1| unknown [Arabidopsis thaliana]
gi|332191222|gb|AEE29343.1| uncharacterized protein [Arabidopsis thaliana]
Length = 245
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 113/279 (40%), Gaps = 80/279 (28%)
Query: 21 MERPENVNNCEHIID-ITITDVSSSNSTH--DRTSNGLDSTRHEDGSSGSSRNPTSQPST 77
ME P + EHI+D +TI SSSN H D T+NG S+ E +P
Sbjct: 1 MEDPL-LTQSEHIVDDVTIHGDSSSNEEHIVDVTTNGNPSSADE-----------KRPHE 48
Query: 78 SVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAP 137
V S+ FT + + I VE V+ L Q+V+A+VVL++ + E P
Sbjct: 49 GVQWSDI----FTF------------TTVCILVEFVVALVQIVAAIVVLTLAKDEQPPQK 92
Query: 138 LF-EWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTS 196
+F I+ Y C+ATLP+L R+ S + SV + R
Sbjct: 93 MFPTLILSYTGCCIATLPILGLRFWHSYR-----SVSTET-----------------RIY 130
Query: 197 EVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAD 256
EV V+ K L+ FF W VV + SS +
Sbjct: 131 EV--------------------------VDILKKMLEYFFVGWVVVLLWHLINNSSSIDN 164
Query: 257 APNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSI 295
+ LC+ FLAISCI + + + CA +C P I+ +
Sbjct: 165 TTQQFWLCMTFLAISCILHVLRNLPCAGVCFLYPMILYL 203
>gi|225440256|ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 331
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 88/222 (39%), Gaps = 66/222 (29%)
Query: 108 ISVELVLTLSQV-VSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQV 166
+ ++++ L+ V VS VV+LS F+ E P PL WI GYA C+ + + +++R+
Sbjct: 76 VVLDVIWNLAFVSVSMVVLLSTFQ-ERPSRPLRVWIFGYALQCLLHVGFVCFQFRR---- 130
Query: 167 SEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVE 226
RN + ED + I NT
Sbjct: 131 --------RNGN--------------------EDRHSSIVKRLESMNTM----------- 151
Query: 227 YFKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLAIS------CIGYAMPF 279
F +VW+V G WI GG D+P LY L +VFLA CIG A F
Sbjct: 152 --------FSSVWWVFGFCWILAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMACIF 203
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF 321
C L I + +RE GA+ + I LP Y+F
Sbjct: 204 FFALFCCIPLAAIAYAMKIRE------GASEDDIRLLPRYRF 239
>gi|422294477|gb|EKU21777.1| ring u-box domain-containing protein, partial [Nannochloropsis
gaditana CCMP526]
Length = 326
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 209 RGGQNTGVLSPRF-----KVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRL 263
RGG + G P VLVE + LD F +WF +GN W+FG +P ++ +
Sbjct: 165 RGGTSAGRPHPDEGGQGPSVLVEKAREILDIFALIWFTLGNAWVFGSRYCRFTSPGIFYV 224
Query: 264 CIVFLAISCIGYAMPFILCATI----CCCLPCIVSI-LGLREDLAQTRGATAESIDALPT 318
+ + ++ + P +L C C+PC + + + L+ +RGA++ I+ALP
Sbjct: 225 SLGIIVMTYVTMLFPVLLALLFVPFACFCMPCFLRLAIQLQAQDRASRGASSAEINALPV 284
Query: 319 YKF 321
KF
Sbjct: 285 VKF 287
>gi|218191528|gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indica Group]
Length = 322
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 102/265 (38%), Gaps = 69/265 (26%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
E P PL W+VGYA C+ + L+ R+ + V+S + A A A S
Sbjct: 41 ESPVTPLRLWLVGYALQCLVHVGLVCSDSRRRPAHARSSDVESADGDA---AGAGTDSSD 97
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIF-GG 250
E + R+ A NT +V + +W+++G W+ GG
Sbjct: 98 SDDDDEGREQRSSFAKRCESINT---------MVSF----------LWWIIGFYWVVSGG 138
Query: 251 HSSAADAPNLYRLC----------------------------IVFLAISCIGYAMPFILC 282
DAP LY C VF A+ C+ AM +
Sbjct: 139 DVLEQDAPRLYWYCGPKPVPITDYFMIVQSNVHMLSVVFLAFDVFFAVFCV--AMACFIG 196
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGG 342
+CCCLPC+++IL LA GA+ I LP Y++ S+ ++ D G
Sbjct: 197 IALCCCLPCVIAIL---YALAGQEGASDADIGFLPRYRY-------SDPSEDGQKGTDEG 246
Query: 343 VV------AAGTEKERVISGEDAVC 361
V+ + + ER++ EDA C
Sbjct: 247 VMIPVLNNSGTSTSERILLHEDAEC 271
>gi|297844462|ref|XP_002890112.1| hypothetical protein ARALYDRAFT_312551 [Arabidopsis lyrata subsp.
lyrata]
gi|297335954|gb|EFH66371.1| hypothetical protein ARALYDRAFT_312551 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 59/200 (29%)
Query: 93 GESRRRRSPL-NSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVA 151
+ ++ R P N +W S+E V+TL VL + ++ H L+ GY GC+A
Sbjct: 25 NDQQQLRDPYTNESIWNSIEFVVTL--------VLIILKNIHKHYCLYG-SSGYTCGCIA 75
Query: 152 TLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGG 211
TLP+L WR+ N+ P+S++ R+N
Sbjct: 76 TLPILCWRFWLYNRSVGPESIEEHLREKRINKD--------------------------- 108
Query: 212 QNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGG---HSSAAD--APNLYRLCIV 266
+++F M CFF WFVV +WI +SSA D + LC+
Sbjct: 109 -------------LDFFMM---CFFVGWFVVF-LWILSSIAFNSSALDDTTTQFFWLCLA 151
Query: 267 FLAISCIGYAMPFILCATIC 286
L SCI Y + + A +C
Sbjct: 152 LLTFSCIRYVIFNLTLAMVC 171
>gi|357122910|ref|XP_003563156.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 362
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 224 LVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM----P 278
+V++ + F +W+++G W+ GG + + DAP LY L IVFLA
Sbjct: 165 IVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVALA 224
Query: 279 FILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI 338
++ +CCCLPCI++IL D GA+ E I+ L YKF+ ++ +
Sbjct: 225 CVIGIAVCCCLPCIIAILYAVTDQVCQEGASEEDINNLSKYKFRTMGEADKLVAGIAAPV 284
Query: 339 GDGGVVAAGTEK--ERVISGEDA---VCFC-WTAG-------FNHEFRYLVID 378
G G + GT E ++S EDA +C C + G NH F ID
Sbjct: 285 G-GVMTECGTNPPVEHILSAEDAECCICLCPYEDGTELRELPCNHHFHCTCID 336
>gi|8072397|gb|AAF71985.1|AC013453_10 Hypothetical protein [Arabidopsis thaliana]
Length = 180
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 52/181 (28%)
Query: 109 SVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSE 168
S+E V+TL Q+V A++V+ + E+P A WI+ YA G +A LP+L WR+ Q
Sbjct: 41 SIEFVMTLVQIVVAILVVKGTKGEYPEA---TWILVYAYGSIANLPILCWRFWQI----- 92
Query: 169 PDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYF 228
R P++ R + L F
Sbjct: 93 ---------------------------------RHPVSHLRINRVMFRLRTIF------- 112
Query: 229 KMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCC 288
+CFFA WFVV SS + L+ LC+VFL CI Y +P ++CA CCC
Sbjct: 113 ----ECFFAGWFVVFFWVFVCSSSSLDHSSQLFWLCVVFLVFGCIRYVLPMVICAATCCC 168
Query: 289 L 289
+
Sbjct: 169 V 169
>gi|46390435|dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
Length = 180
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 25/137 (18%)
Query: 238 VWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCLP 290
+W+++G W+ GG DAP LY L +VFLA + C+ AM + +CCCLP
Sbjct: 5 LWWIIGFYWVVSGGDVLEQDAPRLYWLSVVFLAFDVFFAVFCV--AMACFIGIALCCCLP 62
Query: 291 CIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVV------ 344
C+++IL LA GA+ I LP Y++ S+ ++ D GV+
Sbjct: 63 CVIAIL---YALAGQEGASDADIGFLPRYRY-------SDPSEDGQKGTDEGVMIPVLNN 112
Query: 345 AAGTEKERVISGEDAVC 361
+ + ER++ EDA C
Sbjct: 113 SGTSTSERILLHEDAEC 129
>gi|15218255|ref|NP_173017.1| uncharacterized protein [Arabidopsis thaliana]
gi|8072401|gb|AAF71989.1|AC013453_14 Hypothetical protein [Arabidopsis thaliana]
gi|55978711|gb|AAV68817.1| hypothetical protein AT1G15640 [Arabidopsis thaliana]
gi|332191224|gb|AEE29345.1| uncharacterized protein [Arabidopsis thaliana]
Length = 255
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 99/260 (38%), Gaps = 71/260 (27%)
Query: 50 RTSNGLDSTRHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPL------- 102
+ + LD G S S+ +T+V+ S+ G+ RR L
Sbjct: 8 KNEHILDDVTIIHGDSSSNEEHIVNITTNVDSSSDDEQTQDDCGDHLRRIIALFVDEGCD 67
Query: 103 ---NSGLWISVELVLTLSQVVSAVVVLSVFRHE-HPRAPLFEWIVGYAAGCVATLPLL-- 156
+S +W+ VE VLTL QVV+A+ VL++ + E P+ I+ Y GC+ L +L
Sbjct: 68 GFTSSHVWVMVEFVLTLLQVVAAIAVLTLTKDETDPQKVFRTLIICYTGGCIVVLLILGL 127
Query: 157 -YWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTG 215
+W Y R EV ++
Sbjct: 128 DFWDY-------------------------------CGRFYEVMEN-------------- 142
Query: 216 VLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGY 275
K +++YF F W VV + + SS +A Y LC+ FL +SCI +
Sbjct: 143 -----LKKMLDYF-------FVGWVVVFSWHLINNSSSPDNATQQYWLCMAFLVVSCILH 190
Query: 276 AMPFILCATICCCLPCIVSI 295
+P + CA C P I+ +
Sbjct: 191 VLPNLPCAAACFLYPMILRL 210
>gi|91805795|gb|ABE65626.1| hypothetical protein At1g15640 [Arabidopsis thaliana]
Length = 255
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 99/260 (38%), Gaps = 71/260 (27%)
Query: 50 RTSNGLDSTRHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPL------- 102
+ + LD G S S+ +T+V+ S+ G+ RR L
Sbjct: 8 KNEHILDDVTIIHGDSSSNEEHIVNITTNVDSSSDDEQTQDDCGDHLRRIIALFVDEGCD 67
Query: 103 ---NSGLWISVELVLTLSQVVSAVVVLSVFRHE-HPRAPLFEWIVGYAAGCVATLPLL-- 156
+S +W+ VE VLTL QVV+A+ VL++ + E P+ I+ Y GC+ L +L
Sbjct: 68 GFTSSHVWVMVEFVLTLLQVVAAIAVLTLTKDETDPQKVFRTLIICYTGGCIVVLLILGL 127
Query: 157 -YWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTG 215
+W Y R EV ++
Sbjct: 128 DFWDY-------------------------------CGRFYEVMEN-------------- 142
Query: 216 VLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGY 275
K +++YF F W VV + + SS +A Y LC+ FL +SCI +
Sbjct: 143 -----LKKMLDYF-------FVGWVVVFSWHLINNSSSPDNATQQYWLCMAFLVVSCILH 190
Query: 276 AMPFILCATICCCLPCIVSI 295
+P + CA C P I+ +
Sbjct: 191 VLPNLPCAAACFLYPMILRL 210
>gi|413919226|gb|AFW59158.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 291
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 34/201 (16%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
++++L+ L+ + A VVL + R E PL W+ GYA CV + + YR +
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVVHMICVAIEYRMRH--- 141
Query: 168 EPDSVQSRNSSARLNAPA-------APFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPR 220
R S+ APA A S S E++ H G+ T
Sbjct: 142 -----GQRGSAVAGAAPADVERGSDASSSSSDEDDRELDLH---------GRRTD----- 182
Query: 221 FKVLVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAMPF 279
+ + ++ + A F +W+++G WI GG DAP LY LCIVFLA
Sbjct: 183 YASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFVVFCV 242
Query: 280 ----ILCATICCCLPCIVSIL 296
I+ +CCCLPCI++IL
Sbjct: 243 ALACIIGIAVCCCLPCIIAIL 263
>gi|242062606|ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 128/322 (39%), Gaps = 55/322 (17%)
Query: 62 DGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGES------------RRRRSPLNSGLWIS 109
D SG+ +P+ + + A RRG S RRR +S ++
Sbjct: 27 DARSGTPASPSPSAARPSRLAALIGRAAGRRGPSMLVRETAALQLQRRRADWAHSRPVVA 86
Query: 110 VELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEP 169
+++ ++ +A VL+ E P PL W+VGYAA C+ + L+ ++
Sbjct: 87 LDIAWNVAFAAAAAAVLASSAEESPVKPLRLWLVGYAAQCLVHVGLV---------CADT 137
Query: 170 DSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFK 229
R + + +A +D RA S R + L+ +
Sbjct: 138 RRGTRRARGSASDVESAGAGTDSSDADSEDDERAEGRSSRTSR-----CETMNTLISF-- 190
Query: 230 MALDCFFAVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFL------AISCIGYAMPFILC 282
+W+++G W+ GG AP LY L +VFL A+ C+ A FI
Sbjct: 191 --------LWWIIGFYWLVSGGEVLEYGAPRLYWLTVVFLAFDVFFAVFCVAVAC-FIGI 241
Query: 283 ATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI---G 339
A +CCCLPC+++IL LA GA+ I LP Y+F D I
Sbjct: 242 A-LCCCLPCVIAIL---YALAGQEGASDADISVLPRYRFSDPSEDGEKGTDEGLMIPILN 297
Query: 340 DGGVVAAGTEKERVISGEDAVC 361
+ GV + ER++ EDA C
Sbjct: 298 NSGV----STSERILLREDAEC 315
>gi|452822917|gb|EME29932.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 368
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 224 LVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCA 283
LV + L+ F+ VWF+VG++W+ + AP+LYRL + + I +P
Sbjct: 204 LVSRWLRLLNAFYLVWFIVGSIWLSECETCNKTAPHLYRLVLALIVIYYALLGLPLACFC 263
Query: 284 TICCCLPCIVSILGLREDLAQT---RGATAESIDALP 317
I CCLP + +L + Q R ATAE I+ LP
Sbjct: 264 LIMCCLPLFIRLLLPYAESTQRRRGRAATAEQINNLP 300
>gi|194700864|gb|ACF84516.1| unknown [Zea mays]
gi|414884507|tpg|DAA60521.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 356
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 102/265 (38%), Gaps = 65/265 (24%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
E P PL WIVGY C+ + + YR+ + ++ +
Sbjct: 113 ERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRRNADQEGAGD----------------- 155
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGG 250
ED + I H NT F +W++VG W+ GG
Sbjct: 156 -------EDLKLSIVKHLESANT-------------------MFSFIWWIVGFYWVSAGG 189
Query: 251 HSSAADAPNLYRLCIVFLAISCIGYAMPF----ILCATICCCLPCIVSILGLREDLAQTR 306
+ + DAP LY L IVFLA ++ +CCCLPCI++IL D
Sbjct: 190 KALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTD---QE 246
Query: 307 GATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ERVISGEDA---VC 361
GA+ + I+ L +KF+ ++ +G G + GT E ++S EDA +C
Sbjct: 247 GASEDDINNLSKFKFQTMSDADKLAAGIAAPVG-GVMTECGTNPPVEHILSAEDAECCIC 305
Query: 362 FC-WTAGF-------NHEFRYLVID 378
C + G NH F ID
Sbjct: 306 LCPYEDGVELRELPCNHHFHCSCID 330
>gi|224071770|ref|XP_002303571.1| predicted protein [Populus trichocarpa]
gi|222841003|gb|EEE78550.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 240 FVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGY----AMPFILCATICCCLPCIVS 294
+++G W+ GG + A +P LY LCIVFL A+ ++ +CCCLPCI++
Sbjct: 1 WIIGFYWVSTGGQALALGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIA 60
Query: 295 ILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEK--ER 352
IL D GA+ E ID L +KF+ D+ G G + GT+ E
Sbjct: 61 ILYAVTD---QEGASKEDIDQLAKFKFRRDGDIDKLTGDDQGCSG-GIMTECGTDSPMEH 116
Query: 353 VISGEDA-VCFCWTA 366
V+SGEDA C C +A
Sbjct: 117 VLSGEDAECCICLSA 131
>gi|15218247|ref|NP_173013.1| uncharacterized protein [Arabidopsis thaliana]
gi|8072399|gb|AAF71987.1|AC013453_12 Hypothetical protein [Arabidopsis thaliana]
gi|60547563|gb|AAX23745.1| hypothetical protein At1g15600 [Arabidopsis thaliana]
gi|71905403|gb|AAZ52679.1| hypothetical protein At1g15600 [Arabidopsis thaliana]
gi|332191219|gb|AEE29340.1| uncharacterized protein [Arabidopsis thaliana]
Length = 220
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 50/184 (27%)
Query: 109 SVELVLTLSQVVSAVVVLSVFR-HEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
S+E V+TL + + ++VL R EHP+ L WI+GY GC+ATLP+L WR+ N+
Sbjct: 47 SIEFVVTLVLIAAVIIVLIEPRDEEHPQTMLSIWIIGYTCGCIATLPILCWRFWLYNRSV 106
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
+S R+N F TG
Sbjct: 107 GSESTDEYLRETRINKDMDFFM------------------------TG------------ 130
Query: 228 FKMALDCFFAVWFVVGNVWIFGGH---SSAAD--APNLYRLCIVFLAISCIGYAMPFILC 282
FF W+VV +WI SSA D + LC+ L SCI Y + +
Sbjct: 131 -------FFVGWYVV-FLWILSSKAFDSSALDDTTTQYFWLCLALLTFSCIRYVLFNLTL 182
Query: 283 ATIC 286
A +C
Sbjct: 183 AMVC 186
>gi|224056495|ref|XP_002298884.1| predicted protein [Populus trichocarpa]
gi|222846142|gb|EEE83689.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 9/134 (6%)
Query: 229 KMALDCFFAVWFVVGNVWIFGGH-SSAADAPNLYRLCIVFLAISCIGYAMPFILCATICC 287
+ +L+ FFA+WFV+GNVW+F S AP L+ LCI LA + + Y+ PF+L +CC
Sbjct: 5 RTSLELFFAIWFVMGNVWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFLLLCC 64
Query: 288 CLPCIVSILGLREDLAQT-RGATAESIDALPTYKFKLKKSRSS--NDRDNSSSIGDGGV- 343
C+P I ++LG ++ RGA+ + I +LP++++K + S N+ D +S+I +
Sbjct: 65 CVPLISTVLGYNMNMGSAERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIASEDLE 124
Query: 344 ----VAAGTEKERV 353
+A +KE V
Sbjct: 125 CCICLAKYKDKEEV 138
>gi|449437970|ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 336
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 97/260 (37%), Gaps = 71/260 (27%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
E P PL WI GY C+ + +++ Y++S
Sbjct: 100 ERPSTPLRLWISGYGLQCLLHVGFVFFEYQRS---------------------------- 131
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWI-FGG 250
+H G ++ K L M +VW+V G WI GG
Sbjct: 132 --------------MAHHGFEDRTAHRSIMKRLESMNTMTS----SVWWVFGFYWIVMGG 173
Query: 251 HSSAADAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCLPCIVSILGLREDLAQ 304
+ D+P LY L +VFLA + CIG M ++ ++CCC+P I+ +
Sbjct: 174 QALLQDSPRLYWLTVVFLAFDLFFILFCIG--MACVIFFSLCCCIP----IVAFAYAMTT 227
Query: 305 TRGATAESIDALPTYKFK--------LKKSR----SSNDRDNSSSIGDGGVVAAGTEKER 352
GA+ E I LP Y F+ L K R S+ + DNS I + + +E
Sbjct: 228 REGASEEDIRTLPKYTFRQAVLGTFNLGKEREPIGSTVELDNSHRIKELALHPEDSECCI 287
Query: 353 VISGEDAVCFCWTAGFNHEF 372
+S + +T NH F
Sbjct: 288 CLSRYEDGTELYTLPCNHHF 307
>gi|413923908|gb|AFW63840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 36/197 (18%)
Query: 132 EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
+ P PL W+VGYAA C+ + +++ R + + + ++ A ++
Sbjct: 107 DSPVKPLRLWLVGYAAQCLVHVGIVFTRLETRARHAWGPASDVESAGAGTDSSGT----- 161
Query: 192 VPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIF-GG 250
SE ++ +SH T L+ + +W+++G W+ GG
Sbjct: 162 ---DSEDDETAEGRSSHASRCET------INRLISF----------LWWIIGFYWLVSGG 202
Query: 251 HSSAADAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCLPCIVSILGLREDLAQ 304
AP LY L IVFLA + C+ AM + +CCCLPC+V+IL LA
Sbjct: 203 EVLEYGAPRLYWLTIVFLAFDVFFAVFCV--AMSCFIGIALCCCLPCVVAIL---YALAG 257
Query: 305 TRGATAESIDALPTYKF 321
GA+ I LP Y++
Sbjct: 258 KVGASDGDISVLPRYRY 274
>gi|357122908|ref|XP_003563155.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 359
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 224 LVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM----P 278
+V++ + F +W+++G W+ GG + + DAP LY L IVFLA
Sbjct: 165 IVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVALA 224
Query: 279 FILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI 338
++ +CCCLPCI++IL D GA+ E I+ L YKF+ ++ +
Sbjct: 225 CVIGIAVCCCLPCIIAILYAVTD---QEGASEEDINNLSKYKFRTMGEADKLVAGIAAPV 281
Query: 339 GDGGVVAAGTEK--ERVISGEDA---VCFC-WTAG-------FNHEFRYLVID 378
G G + GT E ++S EDA +C C + G NH F ID
Sbjct: 282 G-GVMTECGTNPPVEHILSAEDAECCICLCPYEDGTELRELPCNHHFHCTCID 333
>gi|8072396|gb|AAF71984.1|AC013453_9 Hypothetical protein [Arabidopsis thaliana]
Length = 211
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 104/261 (39%), Gaps = 80/261 (30%)
Query: 21 MERPENVNNCEHIID-ITITDVSSSNSTH--DRTSNGLDSTRHEDGSSGSSRNPTSQPST 77
ME P + EHI+D +TI SSSN H D T+NG S+ E +P
Sbjct: 1 MEDPL-LTQSEHIVDDVTIHGDSSSNEEHIVDVTTNGNPSSADE-----------KRPHE 48
Query: 78 SVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAP 137
V S+ FT + + I VE V+ L Q+V+A+VVL++ + E P
Sbjct: 49 GVQWSDI----FTF------------TTVCILVEFVVALVQIVAAIVVLTLAKDEQPPQK 92
Query: 138 LF-EWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSISVPRTS 196
+F I+ Y C+ATLP+L R+ S + SV + R
Sbjct: 93 MFPTLILSYTGCCIATLPILGLRFWHSYR-----SVSTET-----------------RIY 130
Query: 197 EVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAD 256
EV V+ K L+ FF W VV + SS +
Sbjct: 131 EV--------------------------VDILKKMLEYFFVGWVVVLLWHLINNSSSIDN 164
Query: 257 APNLYRLCIVFLAISCIGYAM 277
+ LC+ FLAISCI + +
Sbjct: 165 TTQQFWLCMTFLAISCILHVL 185
>gi|323454158|gb|EGB10028.1| hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens]
Length = 360
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGG-HSSAADAPN--LYRLCIVFLAIS----C 272
R+ V+V + +LD +WFVVGN+W+ GG S A+A +Y +V L + C
Sbjct: 150 RYLVMVTNARNSLDALALIWFVVGNMWLLGGADDSCAEAGKSPIYVTDVVMLVVQYGQIC 209
Query: 273 IGYAMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKF 321
+ + C CLPC++ +L D RGAT + LPT +
Sbjct: 210 LPCIFAIAMVPVFCFCLPCVIRLLASLHDPVAGRGATKRDLARLPTVPY 258
>gi|297741734|emb|CBI32866.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 82/223 (36%), Gaps = 65/223 (29%)
Query: 123 VVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLN 182
VV+LS F+ E P PL WI GYA C+ + + +++R+ RN +
Sbjct: 2 VVLLSTFQ-ERPSRPLRVWIFGYALQCLLHVGFVCFQFRR------------RNGN---- 44
Query: 183 APAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVV 242
ED + I NT F +VW+V
Sbjct: 45 ----------------EDRHSSIVKRLESMNTM-------------------FSSVWWVF 69
Query: 243 GNVWIF-GGHSSAADAPNLYRLCIVFLAIS------CIGYAMPFILCATICCCLPCIVSI 295
G WI GG D+P LY L +VFLA CIG A F C L I
Sbjct: 70 GFCWILAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIPLAAIAYA 129
Query: 296 LGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI 338
+ +RE GA+ + I LP Y+F D D ++
Sbjct: 130 MKIRE------GASEDDIRLLPRYRFCDASLVRKVDDDKKQAL 166
>gi|449516611|ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
RIE1-like [Cucumis sativus]
Length = 264
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 36/144 (25%)
Query: 237 AVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCL 289
+VW+V G WI GG + D+P LY L +VFLA + CIG M + ++CCC+
Sbjct: 87 SVWWVFGFYWIVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIG--MACVXFFSLCCCI 144
Query: 290 PCIVSILGLREDLAQTRGATAESIDALPTYKFK--------LKKSR----SSNDRDNSSS 337
P I+ + GA+ E I LP Y F+ L K R S+ + DNS
Sbjct: 145 P----IVAFAYAMTTREGASEEDIRTLPKYTFRQAVLGTFNLGKEREPIGSTVELDNSHR 200
Query: 338 IGDGGVVAAGTEKERVISGEDAVC 361
I KE + ED+ C
Sbjct: 201 I-----------KELALHPEDSEC 213
>gi|145335752|ref|NP_173016.2| uncharacterized protein [Arabidopsis thaliana]
gi|60547565|gb|AAX23746.1| hypothetical protein At1g15630 [Arabidopsis thaliana]
gi|71905405|gb|AAZ52680.1| hypothetical protein At1g15630 [Arabidopsis thaliana]
gi|332191223|gb|AEE29344.1| uncharacterized protein [Arabidopsis thaliana]
Length = 262
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 26/155 (16%)
Query: 18 PLLMERPENVNNCEHIIDITITDVSSSNSTH--DRTSNGLDSTRHEDGSSGSSRNPTSQP 75
PLL + NV D+T+ SSN H D T+NG SS
Sbjct: 4 PLLTKSEHNVE------DVTVHGDPSSNEEHIVDITTNG-----------DSSPADEHIV 46
Query: 76 STSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHE-HP 134
++NG ++ T S+ S +N +WI VEL +TLSQ+V+A L++ + E HP
Sbjct: 47 DITINGDSSSAEEQTPHEASQWSCSFINGIVWILVELAVTLSQIVAATFFLTLTKDEQHP 106
Query: 135 R---APLFEWIVGYAAGCVATLPLL---YWRYRQS 163
PL WI+ Y +AT+P++ W+Y ++
Sbjct: 107 ELNHVPLLIWIICYTCASIATVPIVCCRLWQYIRT 141
>gi|357436793|ref|XP_003588672.1| hypothetical protein MTR_1g011340 [Medicago truncatula]
gi|355477720|gb|AES58923.1| hypothetical protein MTR_1g011340 [Medicago truncatula]
Length = 72
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/36 (72%), Positives = 28/36 (77%)
Query: 232 LDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVF 267
L FAVWFVVGNVWIFGG SSAA APNLYR + +
Sbjct: 33 LRLLFAVWFVVGNVWIFGGRSSAAVAPNLYRYTLSY 68
>gi|115471969|ref|NP_001059583.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|33146524|dbj|BAC79657.1| putative RES protein [Oryza sativa Japonica Group]
gi|113611119|dbj|BAF21497.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|125600141|gb|EAZ39717.1| hypothetical protein OsJ_24155 [Oryza sativa Japonica Group]
gi|215695316|dbj|BAG90507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 221 FKV-LVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM- 277
FK+ +V++ + A F +W+++G WI GG + + DAP LY L IVFLA
Sbjct: 163 FKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAFDVFFVVFC 222
Query: 278 ---PFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDN 334
++ +CCCLPCI++IL D GA+ E I+ L +KF+
Sbjct: 223 VALACVIGIAVCCCLPCIIAILYAVTD---QEGASEEDINNLSKFKFRTMGDADKLVAGI 279
Query: 335 SSSIGDGGVVAAGTEK--ERVISGEDA---VCFC 363
++ +G G + GT E +S EDA +C C
Sbjct: 280 AAPVG-GVMTECGTNPPVEHFLSAEDAECCICLC 312
>gi|356570399|ref|XP_003553376.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 327
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 237 AVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCL 289
+VW+V G WI GG + D+P+LY L +VFLA I CIG A + L
Sbjct: 150 SVWWVFGFYWIVVGGQALLEDSPHLYWLTVVFLAFDVFFIIFCIGMA------CIVFFAL 203
Query: 290 PCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI 338
CI+ I+ L + GA+ E I +LP Y+F L S D DN +
Sbjct: 204 FCIIPIIALAYAMRIREGASEEDIRSLPMYRFSLSNSLVMVD-DNKKQL 251
>gi|218199557|gb|EEC81984.1| hypothetical protein OsI_25906 [Oryza sativa Indica Group]
Length = 361
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 221 FKV-LVEYFKMALDCFFAVWFVVGNVWI-FGGHSSAADAPNLYRLCIVFLAISCIGYAM- 277
FK+ +V++ + A F +W+++G WI GG + + DAP LY L IVFLA
Sbjct: 163 FKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAFDVFFVVFC 222
Query: 278 ---PFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDN 334
++ +CCCLPCI++IL D GA+ E I+ L +KF+
Sbjct: 223 VALACVIGIAVCCCLPCIIAILYAVTD---QEGASEEDINNLSKFKFRTMGDADKLVAGI 279
Query: 335 SSSIGDGGVVAAGTEK--ERVISGEDA---VCFC 363
++ +G G + GT E +S EDA +C C
Sbjct: 280 AAPVG-GVMTECGTNPPVEHFLSAEDAECCICLC 312
>gi|297844466|ref|XP_002890114.1| hypothetical protein ARALYDRAFT_888953 [Arabidopsis lyrata subsp.
lyrata]
gi|297335956|gb|EFH66373.1| hypothetical protein ARALYDRAFT_888953 [Arabidopsis lyrata subsp.
lyrata]
Length = 194
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 58 TRHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLS 117
T H D SS R T +NGS++ ++ +++ W VE V TL
Sbjct: 17 TTHGDSSSNDER--ILDILTMINGSSSSA---AKQIPYEWSEYSIDAFSWNFVEFVATLV 71
Query: 118 QVVSAVVVLSVFRHEH-PRAPLFEWIVGYAAGCVATLPLLYWRYRQSN 164
++V+A+VVL++ + E P+ ++ Y GC+ATLP+L WR+ Q +
Sbjct: 72 KIVAAIVVLTLTKDEQLPQKIFVMLVISYTCGCIATLPILGWRFLQYD 119
>gi|147777193|emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
Length = 342
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 262 RLCIVFLAISCIGYAMPFILCA----TICCCLPCIVSILGLREDLAQTRGATAESIDALP 317
RLCIVFLA + + +CCCLPCI++IL +A GAT E I+ LP
Sbjct: 185 RLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILY---TVADQEGATKEEIERLP 241
Query: 318 TYKF-KLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDAVCFCWTAGFNHE 371
YKF ++ +S N S G T E VI EDA C + + E
Sbjct: 242 KYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDE 296
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 66 GSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVV 125
SSR +PS V + + R+ S + +++V L+ VV A+ V
Sbjct: 48 ASSRRIMREPSMRVRETAAEQL-------EERQSDWAYSKPIVILDIVWNLAFVVVAMTV 100
Query: 126 LSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQ 173
L + R E P PL WI+GY CV + + Y++ ++ +V+
Sbjct: 101 LVMSRDETPSTPLRLWIIGYGLQCVLHMVCICVEYKRRRHLASSGAVE 148
>gi|449017510|dbj|BAM80912.1| ring finger protein [Cyanidioschyzon merolae strain 10D]
Length = 365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 232 LDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPC 291
L + W ++G++W+ + AP L+R+C++ + + +P +L I CCLP
Sbjct: 183 LHALYLGWIILGSIWLSESRTCPGTAPLLFRICVILVLVYFAFLMLPLVLITLIICCLPL 242
Query: 292 IVSIL-GLREDL-AQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSI 338
+ L E L Q R A E ++ LP +F + ++ + I
Sbjct: 243 FIRFLVNYAERLRRQERAAAPEIVEQLPVVQFDASQCEDFGFEEDGAPI 291
>gi|8072400|gb|AAF71988.1|AC013453_13 Hypothetical protein [Arabidopsis thaliana]
Length = 155
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 21 MERPENVNNCEHIIDITITDVSSSNSTH--DRTSNGLDSTRHEDGSSGSSRNPTSQPSTS 78
ME P + ++ D+T+ SSN H D T+NG SS +
Sbjct: 1 MESPLLTKSEHNVEDVTVHGDPSSNEEHIVDITTNG-----------DSSPADEHIVDIT 49
Query: 79 VNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHE-HPR-- 135
+NG ++ T S+ S +N +WI VEL +TLSQ+V+A L++ + E HP
Sbjct: 50 INGDSSSAEEQTPHEASQWSCSFINGIVWILVELAVTLSQIVAATFFLTLTKDEQHPELN 109
Query: 136 -APLFEWIVGYAAGCVATLPL 155
PL WI+ Y +AT+P+
Sbjct: 110 HVPLLIWIICYTCASIATVPI 130
>gi|334182602|ref|NP_001185005.1| uncharacterized protein [Arabidopsis thaliana]
gi|8072398|gb|AAF71986.1|AC013453_11 Hypothetical protein [Arabidopsis thaliana]
gi|332191221|gb|AEE29342.1| uncharacterized protein [Arabidopsis thaliana]
Length = 234
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 71/168 (42%), Gaps = 52/168 (30%)
Query: 18 PLLMERPENVNNCEHIIDITITDVSSSNSTH--DRTSNGLDSTRHEDGSSGSSRNPTSQP 75
PLL + NV D+TI SSSN H D T NG GSS + T
Sbjct: 4 PLLTKSEHNVE------DVTIHGDSSSNDEHIIDITING--------GSSSADHEQTPH- 48
Query: 76 STSVNGSNTRNVAFTRRGESRRRRSPLNSG-LWISVELVLTLSQVVSAVVVLSVFRHEHP 134
E+ + P SG WI VEL +TL Q+V+A+ L + + E
Sbjct: 49 ------------------EAFQWSCPFTSGSFWILVELAVTLVQIVAAIFFLILTKDE-- 88
Query: 135 RAP-----LFEWIVGYAAGCVATLPLL---YWRYRQ------SNQVSE 168
R P LF WI+ Y +ATLP + W+Y Q SN+V E
Sbjct: 89 RDPELDVALFTWIIFYTCASIATLPFVCCRLWQYIQNASSETSNEVME 136
>gi|357509161|ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355499884|gb|AES81087.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 297
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 80/204 (39%), Gaps = 63/204 (30%)
Query: 125 VLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAP 184
+LS F +E P PL W+ GYA C+ + ++ +R V +R+S +
Sbjct: 58 ILSTF-NERPSTPLRLWLCGYAFECLLHVAFVFSEFR----------VTTRDSFSH---- 102
Query: 185 AAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAVWFVVGN 244
P+SI A NT S VW+V G
Sbjct: 103 -TPYSI---------------AKKLEPMNTLASS-------------------VWWVFGF 127
Query: 245 VWIF-GGHSSAADAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCLPCIVSILG 297
WI GG D+P LY L +VFLA I CIG A + L CI+ I+
Sbjct: 128 YWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMA------CIVFFALFCIIPIIA 181
Query: 298 LREDLAQTRGATAESIDALPTYKF 321
L L GA+ + I +LP Y+F
Sbjct: 182 LAYALRIREGASEDDISSLPMYRF 205
>gi|116830881|gb|ABK28397.1| unknown [Arabidopsis thaliana]
Length = 244
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 71/168 (42%), Gaps = 52/168 (30%)
Query: 18 PLLMERPENVNNCEHIIDITITDVSSSNSTH--DRTSNGLDSTRHEDGSSGSSRNPTSQP 75
PLL + NV D+TI SSSN H D T NG GSS + T
Sbjct: 4 PLLTKSEHNVE------DVTIHGDSSSNDEHIIDITING--------GSSSADHEQTPH- 48
Query: 76 STSVNGSNTRNVAFTRRGESRRRRSPLNSG-LWISVELVLTLSQVVSAVVVLSVFRHEHP 134
E+ + P SG WI VEL +TL Q+V+A+ L + + E
Sbjct: 49 ------------------EAFQWSCPFTSGSFWILVELAVTLVQIVAAIFFLILTKDE-- 88
Query: 135 RAP-----LFEWIVGYAAGCVATLPLL---YWRYRQ------SNQVSE 168
R P LF WI+ Y +ATLP + W+Y Q SN+V E
Sbjct: 89 RDPELDVALFTWIIFYTCASIATLPFVCCRLWQYIQNASSETSNEVME 136
>gi|145335748|ref|NP_173014.2| uncharacterized protein [Arabidopsis thaliana]
gi|91805791|gb|ABE65624.1| hypothetical protein At1g15610 [Arabidopsis thaliana]
gi|332191220|gb|AEE29341.1| uncharacterized protein [Arabidopsis thaliana]
Length = 243
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 71/168 (42%), Gaps = 52/168 (30%)
Query: 18 PLLMERPENVNNCEHIIDITITDVSSSNSTH--DRTSNGLDSTRHEDGSSGSSRNPTSQP 75
PLL + NV D+TI SSSN H D T NG GSS + T
Sbjct: 4 PLLTKSEHNVE------DVTIHGDSSSNDEHIIDITING--------GSSSADHEQTPH- 48
Query: 76 STSVNGSNTRNVAFTRRGESRRRRSPLNSG-LWISVELVLTLSQVVSAVVVLSVFRHEHP 134
E+ + P SG WI VEL +TL Q+V+A+ L + + E
Sbjct: 49 ------------------EAFQWSCPFTSGSFWILVELAVTLVQIVAAIFFLILTKDE-- 88
Query: 135 RAP-----LFEWIVGYAAGCVATLPLL---YWRYRQ------SNQVSE 168
R P LF WI+ Y +ATLP + W+Y Q SN+V E
Sbjct: 89 RDPELDVALFTWIIFYTCASIATLPFVCCRLWQYIQNASSETSNEVME 136
>gi|15219301|ref|NP_175067.1| uncharacterized protein [Arabidopsis thaliana]
gi|8778660|gb|AAF79668.1|AC022314_9 F9C16.22 [Arabidopsis thaliana]
gi|61742530|gb|AAX55086.1| hypothetical protein At1g44010 [Arabidopsis thaliana]
gi|332193891|gb|AEE32012.1| uncharacterized protein [Arabidopsis thaliana]
Length = 227
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 90/235 (38%), Gaps = 76/235 (32%)
Query: 60 HEDGSSGSSRNP----TSQPSTSVNGSNT--RNVAFTRRGESRRRRSPLNSGLWIS-VEL 112
H D SS N T+ S++ +G N R + TR E W +E
Sbjct: 15 HGDSSSNDEHNVNITITNDSSSTPHGVNIVERCIPCTREME------------WFCFIEF 62
Query: 113 VLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSV 172
VL + Q+V+A VV++ + EHP WI+GY GCVA L + + + +
Sbjct: 63 VLNIVQIVAAFVVVTRAKDEHPGTSFLVWIIGYTCGCVAILLIQF-----------INRI 111
Query: 173 QSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMAL 232
SR+ ++ K + EY
Sbjct: 112 SSRSYEEIMDV-------------------------------------LKNICEY----- 129
Query: 233 DCFFAVWFVVGNVWIFGGHSSAA-DAPNLYRLCIVFLAISCIGYAMPFILCATIC 286
FF W VV +W++ SS+ D + LC+ FLA +CI Y ++C+ IC
Sbjct: 130 --FFVGW-VVLFLWMYHSSSSSLYDNTQYFWLCMAFLAFTCIRYVPARLICSAIC 181
>gi|297851640|ref|XP_002893701.1| hypothetical protein ARALYDRAFT_890773 [Arabidopsis lyrata subsp.
lyrata]
gi|297339543|gb|EFH69960.1| hypothetical protein ARALYDRAFT_890773 [Arabidopsis lyrata subsp.
lyrata]
Length = 121
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 106 LWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQ 165
+W +L LTL Q+V+A+VV+ + +HP+ WI+GY GC+ LP L WR +
Sbjct: 47 VWNFFDLALTLVQIVAAIVVMVQAKDKHPQV----WIIGYTCGCIGILPCLCWRCWHYSP 102
Query: 166 VSEPDSVQSR 175
DS +R
Sbjct: 103 CFSSDSYTTR 112
>gi|356504625|ref|XP_003521096.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 325
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 237 AVWFVVGNVWIF-GGHSSAADAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCL 289
+VW++ G WI G + D+P LY L +VFLA I CIG A + L
Sbjct: 148 SVWWIFGFYWIVVGDQALLEDSPRLYWLTVVFLAFDVFFIIFCIGMA------CIVFFAL 201
Query: 290 PCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTE 349
CI+ I+ L + GA+ E I +LP Y+F S D DN + G V +
Sbjct: 202 FCIIPIIALAYAMRIREGASEEDILSLPMYRFSQSNSLVMVD-DNKKQLIKGRVDSCNGS 260
Query: 350 KERVIS-----GEDAVCFC 363
+S E +C C
Sbjct: 261 HMSALSLHPDDSECCICLC 279
>gi|147815562|emb|CAN70533.1| hypothetical protein VITISV_010221 [Vitis vinifera]
Length = 240
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 94/259 (36%), Gaps = 100/259 (38%)
Query: 107 WISVELVLTLSQVVSAVVVLSV-FRHEHPRAPLFEWIVGYAAG--CVATLPLLYWRYRQS 163
+I + VL++ QVV+++V L V +EHP L W+VGYA+G + PLLY+R R
Sbjct: 40 FIHILFVLSVIQVVASLVGLWVSIVYEHPDYELISWVVGYASGFAVIVIFPLLYFRCRI- 98
Query: 164 NQVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKV 223
T L+ R +
Sbjct: 99 --------------------------------------------------TSTLNLRQRK 108
Query: 224 LVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCA 283
++ F + + FF VW+ +G + GG SS AP L
Sbjct: 109 VMTGFWITMSFFFLVWYGLGIAFFAGGSSSNHGAPRL----------------------- 145
Query: 284 TICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGV 343
L E + Q + LP L + + S R +GG+
Sbjct: 146 ----------ETKNLEEPVPQI-----PLVHCLPA---SLNQIKESGGRSGD----EGGI 183
Query: 344 V-AAGTEKERVISGEDAVC 361
V AAGTEKER +SGE+ VC
Sbjct: 184 VLAAGTEKERTLSGEEVVC 202
>gi|297846804|ref|XP_002891283.1| hypothetical protein ARALYDRAFT_314116 [Arabidopsis lyrata subsp.
lyrata]
gi|297337125|gb|EFH67542.1| hypothetical protein ARALYDRAFT_314116 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 65/238 (27%)
Query: 62 DGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPLNSGL--WIS-VELVLTLSQ 118
DG S S+ + + + S+T R ++ R P +G W +E VL + Q
Sbjct: 15 DGDSSSNDEHNVNITITDDSSST-----PREAKAVERCIPSCTGEMEWCCFIEFVLNIVQ 69
Query: 119 VVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSS 178
+V+A VV++ + EHP WI+GY GCVA L + + + V SR+
Sbjct: 70 IVAAFVVVNRAKDEHPETSFLIWIIGYTCGCVAILLIQF-----------INCVSSRS-- 116
Query: 179 ARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEYFKMALDCFFAV 238
++V++++ + FF
Sbjct: 117 ------------------------------------------YEVIIDFVTEIFEYFFVG 134
Query: 239 WFVVGNVWIFGGHSSAA-DAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSI 295
W V+ +WI+ SS+ D + LC+ FLA +CI Y ++ + IC I+ I
Sbjct: 135 W-VLLFLWIYHSSSSSLYDNTQHFWLCMAFLAFTCIRYIPAHLIFSAICFLFVVIIWI 191
>gi|297844464|ref|XP_002890113.1| hypothetical protein ARALYDRAFT_888952 [Arabidopsis lyrata subsp.
lyrata]
gi|297335955|gb|EFH66372.1| hypothetical protein ARALYDRAFT_888952 [Arabidopsis lyrata subsp.
lyrata]
Length = 180
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 72/179 (40%), Gaps = 42/179 (23%)
Query: 18 PLLMERPENVNNCEHIIDITITDVSSSNSTH--DRTSNGLDSTRHEDGSSGSSRNPTSQP 75
PLL + NV+ D+TI SSSN H D T NG + + P
Sbjct: 4 PLLTKSGHNVD------DVTIHGDSSSNDEHIVDITING----------NSDEQTPRESV 47
Query: 76 STSVNGSNTRNVAFTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHP- 134
SV + N +WI VE V+TL Q+V+A+ ++ + E
Sbjct: 48 QWSVQST--------------------NRCVWILVEFVMTLFQIVAAIFFCTLTKDEQNP 87
Query: 135 --RAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVSEPDSVQSRNSSARLNAPAAPFSIS 191
F WI+GY +ATLPLL WR ++ ++ + S R P FS+
Sbjct: 88 ELEEYWFIWIIGYTCASIATLPLLCWRLWHCSETRLWMALLAF-SCIRYVLPNLEFSVK 145
>gi|301111063|ref|XP_002904611.1| transmembrane protein, putative [Phytophthora infestans T30-4]
gi|262095928|gb|EEY53980.1| transmembrane protein, putative [Phytophthora infestans T30-4]
Length = 320
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 213 NTGV-LSPRFKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAIS 271
NT + L ++ + K LD WF+VGN+W+ + D +Y+L + + IS
Sbjct: 130 NTAIRLREQYMAPLSQLKYGLDLAGLFWFLVGNMWVISDGARCDDGSAMYQLALWMIVIS 189
Query: 272 CIGYAMPFILCATICC-------CLPCIVSILGLREDLAQTRGATAESIDALPTYKF 321
YA F+ C + CLPC++ +L +D + +GAT E ID L + +
Sbjct: 190 ---YAKIFLPCLLLLALLPILCFCLPCVIRLLSRLQDPMRGKGATKEMIDQLESKTY 243
>gi|147815563|emb|CAN70534.1| hypothetical protein VITISV_010222 [Vitis vinifera]
Length = 244
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 106 LWISVELVLTLSQVVSAVVVLSVFRH-EHPRAPLFEWIVGYAAGCVATLPLLYWRYRQS 163
++S+ + + Q+V++VV LSV + EHP +F W+VGYA C LP LY+R R +
Sbjct: 37 FFLSIMIYANVIQIVASVVGLSVSKALEHPANKIFAWVVGYAFACAVMLPFLYYRLRNA 95
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 63/147 (42%), Gaps = 29/147 (19%)
Query: 246 WIFG-GHSSAADAPNLY-----------RLCIVFLAISCIGYAMPFILCATICCCLPCIV 293
W+ G + A P LY RL L C YAMP I A+ C ++
Sbjct: 73 WVVGYAFACAVMLPFLYYRLRNAETWNRRLFKALLLSGCTIYAMPGIAIASYCLFFSWLI 132
Query: 294 SILGLREDLAQTRGATAESI--DALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKE 351
L L + + RG + + LPTYKFK K++ G G ++AAGT+K+
Sbjct: 133 LSLLLLKLREKHRGTSTPDSPPNVLPTYKFKSKEN------------GGGVLLAAGTKKK 180
Query: 352 RV-ISGEDAVCFCWTAGF--NHEFRYL 375
+SGED VC + N E R L
Sbjct: 181 SASLSGEDVVCCICLGNYADNEELREL 207
>gi|348669639|gb|EGZ09461.1| hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae]
Length = 321
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 228 FKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICC 287
K LD WF+VGN+W+ + D +Y+L + + IS YA F+ C +
Sbjct: 146 LKYGLDLAGLFWFLVGNMWVISDGARCDDGSAMYQLALWMIVIS---YAKIFLPCLLLLA 202
Query: 288 -------CLPCIVSILGLREDLAQTRGATAESIDALPTYKF 321
CLPC++ +L +D + +GAT E ID L T +
Sbjct: 203 LLPVLCFCLPCVIRLLSRLQDPMRGKGATKEIIDRLETKTY 243
>gi|297814408|ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
gi|297320925|gb|EFH51346.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 85/226 (37%), Gaps = 71/226 (31%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLL---YWRYRQSN 164
++ +++ + V+++ V+L E P P+ WI GY C+ + L+ YWR
Sbjct: 642 VAADILWNAALVLASAVMLVGTVEERPNEPIRVWICGYGLQCLIHVVLVWSEYWR----- 696
Query: 165 QVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVL 224
RN++ R R E DH + + R V+
Sbjct: 697 ----------RNTTRR------------ARDLESGDHEDYSVYDYEQDSDNSTTYRLSVI 734
Query: 225 VEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCAT 284
+A+D FFA++ VV C+V +A
Sbjct: 735 F----LAIDVFFAIFCVV-------------------LACLVGIA--------------- 756
Query: 285 ICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSN 330
+CCCLPCI+++L +A T G + + LP YKFK S N
Sbjct: 757 LCCCLPCIIALL---YAVAGTEGVSEAELGVLPLYKFKAFHSNEKN 799
>gi|384495132|gb|EIE85623.1| hypothetical protein RO3G_10333 [Rhizopus delemar RA 99-880]
Length = 222
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 228 FKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAM---PFILCAT 284
K LD F +WF+VGN IF + + DA Y LA +GYA+ P ++C +
Sbjct: 8 LKSLLDLFSILWFIVGNYLIFSPSNCSTDASLFYY---AILAFVILGYALLLIPIVICIS 64
Query: 285 ICCCLP-CIVSILGLREDL-AQTRGATAESIDALPTYKFK 322
CLP +V++ ++ A G T E + +P +K+K
Sbjct: 65 AIFCLPFVLVAMRSFNINVSAFMEGGTKEDLGKIPVFKYK 104
>gi|115448539|ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group]
gi|113537580|dbj|BAF09963.1| Os02g0735900, partial [Oryza sativa Japonica Group]
Length = 157
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 24/118 (20%)
Query: 256 DAPNLYRLCIVFLA------ISCIGYAMPFILCATICCCLPCIVSILGLREDLAQTRGAT 309
DAP LY L +VFLA + C+ AM + +CCCLPC+++IL LA GA+
Sbjct: 1 DAPRLYWLSVVFLAFDVFFAVFCV--AMACFIGIALCCCLPCVIAIL---YALAGQEGAS 55
Query: 310 AESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVV------AAGTEKERVISGEDAVC 361
I LP Y++ S+ ++ D GV+ + + ER++ EDA C
Sbjct: 56 DADIGFLPRYRY-------SDPSEDGQKGTDEGVMIPVLNNSGTSTSERILLHEDAEC 106
>gi|55978713|gb|AAV68818.1| hypothetical protein AT1G15640 [Arabidopsis thaliana]
Length = 138
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 55 LDSTRHEDGSSGSSRNPTSQPSTSVNGSNTRNVAFTRRGESRRRRSPL----------NS 104
LD G S S+ +T+V+ S+ G+ RR L +S
Sbjct: 13 LDDVTIIHGDSSSNEEHIVNITTNVDSSSDDEQTQDDCGDHLRRIIALFVDEGCDGFTSS 72
Query: 105 GLWISVELVLTLSQVVSAVVVLSVFRHE-HPRAPLFEWIVGYAAGCVATLPLL---YWRY 160
+W+ VE VLTL QVV+A+ VL++ + E P+ I+ Y GC+ L +L +W Y
Sbjct: 73 HVWVMVEFVLTLLQVVAAIAVLTLTKDETDPQKVFRTLIICYTGGCIVVLLILGLDFWDY 132
>gi|413924267|gb|AFW64199.1| hypothetical protein ZEAMMB73_725991 [Zea mays]
Length = 95
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 16/78 (20%)
Query: 300 EDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVVAAGTEKERVISGEDA 359
ED TRGAT+ESI+AL + + GG+VAAGT KER +S EDA
Sbjct: 21 EDTNNTRGATSESINALSSGSEAEGQG--------------GGIVAAGTNKERSLSAEDA 66
Query: 360 VCFCWTAGF--NHEFRYL 375
VC A + N E R L
Sbjct: 67 VCCICIAKYAQNDELREL 84
>gi|118489291|gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 218
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLLYWRYRQSNQVS 167
+S++++ + VV +V +L V E P P+ WI GYA C+ + L++ YR+ N
Sbjct: 68 VSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTRR 127
Query: 168 EPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVLVEY 227
E D + S+ N P S+ ED RA S R S +V +
Sbjct: 128 ERDIESQQQSTEEENVPE----------SDDEDDRASFISPRSSVTKRCES--VNTMVSF 175
Query: 228 FKMALDCFFAVWFVVGNVWIF-GGHSSAADAPNLY 261
W++VG W+ GG +AP LY
Sbjct: 176 L----------WWMVGFYWVVSGGDVLLQNAPRLY 200
>gi|147742777|gb|ABQ50557.1| hypothetical protein [Brassica rapa]
Length = 140
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 276 AMPFILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNS 335
A+ ++ +CCCLPCI+++L +A GA+ E I+ L +KF+ + + D++
Sbjct: 58 ALACVIGIAVCCCLPCIIAVLYA---VADQEGASKEDIEQLTKFKFRKVGRVNKHAGDDA 114
Query: 336 SSIGDGGVVAAGTEK--ERVISGEDA 359
+ +G + GT+ E I EDA
Sbjct: 115 QANTEGKMTECGTDSPLEHTILQEDA 140
>gi|328768780|gb|EGF78825.1| hypothetical protein BATDEDRAFT_89994 [Batrachochytrium
dendrobatidis JAM81]
Length = 465
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 231 ALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLP 290
A+D F + V G + + AP +Y + + +S + + PF+LC LP
Sbjct: 186 AIDLPFLILLVAGLIALMSPSRCLETAPLIYYANSILVVLSFMYFCSPFLLCIVAIFFLP 245
Query: 291 CIVSILGLRED-----LAQTRGATAESIDALPTYKFKLK 324
CI + E L +RGA E I+ +P KF+ K
Sbjct: 246 CIFLLSRYYETHPPDILDGSRGAPEELINGIPILKFRRK 284
>gi|4220489|gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 88/235 (37%), Gaps = 75/235 (31%)
Query: 108 ISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVGYAAGCVATLPLL---YWRYRQSN 164
++ +++ + V+++ V+L E P P+ WI Y C+ + L+ YWR
Sbjct: 653 VAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR----- 707
Query: 165 QVSEPDSVQSRNSSARLNAPAAPFSISVPRTSEVEDHRAPIASHRGGQNTGVLSPRFKVL 224
RNS+ R R E DH + Q++ S +++
Sbjct: 708 ----------RNSTRR------------ARDLESYDHEDYNIEYDYEQDSDDNSTTYRLS 745
Query: 225 VEYFKMALDCFFAVWFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCAT 284
V + +A+D FFAV+ VV C+V +A
Sbjct: 746 VIF--LAIDVFFAVFCVV-------------------LACLVGIA--------------- 769
Query: 285 ICCCLPCIVSIL----GLREDLAQTRGATAESID-----ALPTYKFKLKKSRSSN 330
+CCCLPCI+++L G + G E + LP YKFK S N
Sbjct: 770 LCCCLPCIIALLYAVAGTNLETPFLAGFIQEGVSEAELGVLPLYKFKAFHSNEKN 824
>gi|281210989|gb|EFA85155.1| hypothetical protein PPL_02155 [Polysphondylium pallidum PN500]
Length = 548
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 224 LVEYFKMALDCFFAVWFVVGNVWIFGGHSSA---ADAPNLYRLCIVFLAISCIGYAMPFI 280
++ Y L + +WF+VG + F SS + AP L+ + + I I ++ FI
Sbjct: 312 IIPYLARILSSSYVIWFIVGVILTFKAKSSDQCPSSAPYLFWVIYSVVIIQIIICSLGFI 371
Query: 281 LCATICCCLPCIVSILGLREDLAQT-------RGATAESIDALPTYKFKL 323
CC C+ S+L L + T RGAT I L K+K+
Sbjct: 372 F-----CCCSCVFSLLRLGLNFEATDRAASVSRGATDSMIRKLSIKKYKV 416
>gi|444436429|gb|AGE09582.1| C3HC4Z1-like protein, partial [Eucalyptus cladocalyx]
Length = 137
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 258 PNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGLREDLAQT-RGATAESIDAL 316
P L+ LCI LA + + Y+ PF+L +CC +P + + LG ++A RGA+ + I L
Sbjct: 1 PKLHMLCISLLAWNAVSYSFPFLLFLLLCCFVPLMSTFLGYNMNVASVERGASDDQISRL 60
Query: 317 PTYKFKLKKSRSSNDRDNSSSIGDG---GVVAAGTEKERVI 354
P++K+K DN+ +GD +V A +KE I
Sbjct: 61 PSWKYK--------QVDNNLGLGDDSNHNLVLANEDKECCI 93
>gi|440794697|gb|ELR15852.1| hypothetical protein ACA1_187380 [Acanthamoeba castellanii str.
Neff]
Length = 353
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 221 FKVLVEYFKM--ALDCFFAVWFVVGNVWIF--GGHSSAADAPNLYRLCIVFLAIS 271
++ + Y+ M LD + WF++G VWIF G +AP L+R C++ L I
Sbjct: 208 YRRMYSYYLMNRTLDMAWLSWFIIGMVWIFGVGAKDCPNNAPYLFRGCLILLIIQ 262
>gi|401410442|ref|XP_003884669.1| hypothetical protein NCLIV_050670 [Neospora caninum Liverpool]
gi|325119087|emb|CBZ54639.1| hypothetical protein NCLIV_050670 [Neospora caninum Liverpool]
Length = 515
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 239 WFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGL 298
WF++G VW+F H ++AP L++L + + +S + F +C + + GL
Sbjct: 154 WFILGVVWVFNAH-ECSEAPGLWKLTVSAIVVSVLRLVTTF-----VCFWISFPPNAGGL 207
Query: 299 REDLAQTRGATAESIDALPTYKFKLKKSR 327
+ AT E I LP + KK++
Sbjct: 208 QTSDRFVGAATPEQIAKLPLLSYAQKKAQ 236
>gi|298711234|emb|CBJ32454.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 123
Score = 39.7 bits (91), Expect = 2.3, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 280 ILCATICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFK 322
+L +C CLPC++ ++G+ + + +GA + I+ LP K++
Sbjct: 2 LLVPVLCFCLPCVIRLMGMLQGPQRRKGARQDEIEKLPVVKYR 44
>gi|322699786|gb|EFY91545.1| hypothetical protein MAC_02430 [Metarhizium acridum CQMa 102]
Length = 245
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 89 FTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVG---- 144
+ R G R+ L S WI + +L V++ V V + F H + A +FEW++
Sbjct: 132 YQRLGIKNRQHRILRSSFWIKLAFILV-ELVLAIVFVSTTFTHNNNVAAVFEWVIAFIFT 190
Query: 145 -YAAGCVATL-PLLY-----WRYRQSNQVSEPDSVQSRNS 177
Y A + L P +Y R+ +++Q+ + V RN
Sbjct: 191 FYVASFIIDLKPAIYTKSHAARFEKTHQMEDGLDVNGRNG 230
>gi|215704127|dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 285 ICCCLPCIVSILGLREDLAQTRGATAESIDALPTYKFKLKKSRSSNDRDNSSSIGDGGVV 344
+CCCLPC+++IL LA GA+ I LP Y++ S+ ++ D GV+
Sbjct: 9 LCCCLPCVIAIL---YALAGQEGASDADIGFLPRYRY-------SDPSEDGQKGTDEGVM 58
Query: 345 ------AAGTEKERVISGEDAVC 361
+ + ER++ EDA C
Sbjct: 59 IPVLNNSGTSTSERILLHEDAEC 81
>gi|405972252|gb|EKC37031.1| hypothetical protein CGI_10026018 [Crassostrea gigas]
Length = 211
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 232 LDCFFAVWFVVGNVWIFGGHS 252
L CF + WF+ GNVW++G HS
Sbjct: 139 LSCFMSAWFIAGNVWVYGSHS 159
>gi|328868397|gb|EGG16775.1| transmembrane protein [Dictyostelium fasciculatum]
Length = 826
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 220 RFKVLVEYFKMALDCFFAVWFVVGNVWIFGGH---SSAADAPNLYRLCIVFLAISCIGYA 276
R +++ L C + WF+VG V F + + AP L+ +++ S + +
Sbjct: 321 RVQLIFRNLHNVLSCSWITWFIVGIVCTFKARAHDTCTSSAPYLF-----WVSYSVVIFQ 375
Query: 277 MPFILCATICCCLPCIVSI--LGLREDLAQ-------------TRGATAESIDALPTYKF 321
+ A + CC CI S+ LG+ ++ Q +RGAT + L T KF
Sbjct: 376 IVIASLAMLFCCCSCIFSLMRLGVHIEMVQAAGGGGAAGGMGDSRGATDTMLRKLSTKKF 435
Query: 322 K 322
K
Sbjct: 436 K 436
>gi|322706003|gb|EFY97585.1| hypothetical protein MAA_06810 [Metarhizium anisopliae ARSEF 23]
Length = 245
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 89 FTRRGESRRRRSPLNSGLWISVELVLTLSQVVSAVVVLSVFRHEHPRAPLFEWIVG---- 144
+ R G R+ L S WI + +L V++ V V + F H + A +FEW++
Sbjct: 132 YQRLGIKNRQYRILRSSFWIKLAFILV-ELVLAIVFVSTTFTHNNNVAAVFEWVIAFIFT 190
Query: 145 -YAAGCVATL-PLLY-----WRYRQSNQVSEPDSVQSRN 176
Y A + L P +Y R+ +++Q+ V RN
Sbjct: 191 FYVASFIIDLKPAIYTKSHAARFEKTHQMENGLDVNGRN 229
>gi|237839459|ref|XP_002369027.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211966691|gb|EEB01887.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|221483331|gb|EEE21650.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii GT1]
Length = 511
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 239 WFVVGNVWIFGGHSSAADAPNLYRLCIVFLAISCIGYAMPFILCATICCCLPCIVSILGL 298
WF++G VW+F ++AP L++L + + +S + F +C + + GL
Sbjct: 118 WFILGVVWVFNAQ-ECSEAPGLWKLTVSAIVVSMLRLVTTF-----VCFWISFPPNAGGL 171
Query: 299 REDLAQTRGATAESIDALPTYKFKLKKSR 327
+ AT E I LP + KK++
Sbjct: 172 QSADRFVGAATPEQISKLPLLTYAEKKAQ 200
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,002,784,989
Number of Sequences: 23463169
Number of extensions: 243152340
Number of successful extensions: 807551
Number of sequences better than 100.0: 309
Number of HSP's better than 100.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 806420
Number of HSP's gapped (non-prelim): 561
length of query: 387
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 243
effective length of database: 8,980,499,031
effective search space: 2182261264533
effective search space used: 2182261264533
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)