BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016586
(387 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DQ8|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg And Coa
pdb|1DQ8|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg And Coa
pdb|1DQ8|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg And Coa
pdb|1DQ8|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg And Coa
pdb|1DQ9|A Chain A, Complex Of Catalytic Portion Of Human Hmg-Coa Reductase
With Hmg-Coa
pdb|1DQ9|B Chain B, Complex Of Catalytic Portion Of Human Hmg-Coa Reductase
With Hmg-Coa
pdb|1DQ9|C Chain C, Complex Of Catalytic Portion Of Human Hmg-Coa Reductase
With Hmg-Coa
pdb|1DQ9|D Chain D, Complex Of Catalytic Portion Of Human Hmg-Coa Reductase
With Hmg-Coa
pdb|1DQA|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg, Coa, And Nadp+
pdb|1DQA|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg, Coa, And Nadp+
pdb|1DQA|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg, Coa, And Nadp+
pdb|1DQA|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg, Coa, And Nadp+
pdb|1HW8|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Compactin (Also Known As Mevastatin)
pdb|1HW8|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Compactin (Also Known As Mevastatin)
pdb|1HW8|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Compactin (Also Known As Mevastatin)
pdb|1HW8|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Compactin (Also Known As Mevastatin)
pdb|1HW9|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Simvastatin
pdb|1HW9|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Simvastatin
pdb|1HW9|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Simvastatin
pdb|1HW9|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Simvastatin
pdb|1HWI|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Fluvastatin
pdb|1HWI|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Fluvastatin
pdb|1HWI|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Fluvastatin
pdb|1HWI|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Fluvastatin
pdb|1HWJ|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Cerivastatin
pdb|1HWJ|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Cerivastatin
pdb|1HWJ|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Cerivastatin
pdb|1HWJ|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Cerivastatin
pdb|1HWK|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Atorvastatin
pdb|1HWK|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Atorvastatin
pdb|1HWK|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Atorvastatin
pdb|1HWK|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Atorvastatin
pdb|1HWL|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Rosuvastatin (Formally Known As Zd4522)
pdb|1HWL|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Rosuvastatin (Formally Known As Zd4522)
pdb|1HWL|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Rosuvastatin (Formally Known As Zd4522)
pdb|1HWL|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Rosuvastatin (Formally Known As Zd4522)
Length = 467
Score = 228 bits (582), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 148/222 (66%), Gaps = 2/222 (0%)
Query: 136 DEDVVQSVIDGSIPSYALESKLGDCRRAAAIRREALQKMTGR--SLQGLPLDGFDYDSIL 193
D +++Q V IP+Y LE+ + R +IRR+ L K SLQ LP ++Y ++
Sbjct: 43 DAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQYLPYRDYNYSLVM 102
Query: 194 GQCCEMPVGYVQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCKAIYASGGAASML 253
G CCE +GY+ IPVG+AGPL LD E+ VPMATTEGCLVASTNRGC+AI GGA+S +
Sbjct: 103 GACCENVIGYMPIPVGVAGPLCLDEKEFQVPMATTEGCLVASTNRGCRAIGLGGGASSRV 162
Query: 254 LRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNL 313
L DGMTR P+VR A ++E+K +LE F + F+ +SRFARLQ + SIAG+NL
Sbjct: 163 LADGMTRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFDSTSRFARLQKLHTSIAGRNL 222
Query: 314 YIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISG 355
YIRF +GDAMGMNM+SKG + L L FP+M ++ +SG
Sbjct: 223 YIRFQSRSGDAMGMNMISKGTEKALSKLHEYFPEMQILAVSG 264
>pdb|2Q1L|A Chain A, Design And Synthesis Of Pyrrole-Based, Hepatoselective
Hmg-Coa Reductase Inhibitors
pdb|2Q1L|B Chain B, Design And Synthesis Of Pyrrole-Based, Hepatoselective
Hmg-Coa Reductase Inhibitors
pdb|2Q1L|C Chain C, Design And Synthesis Of Pyrrole-Based, Hepatoselective
Hmg-Coa Reductase Inhibitors
pdb|2Q1L|D Chain D, Design And Synthesis Of Pyrrole-Based, Hepatoselective
Hmg-Coa Reductase Inhibitors
pdb|2Q6B|A Chain A, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6B|B Chain B, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6B|C Chain C, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6B|D Chain D, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6C|A Chain A, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6C|B Chain B, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6C|C Chain C, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6C|D Chain D, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|3BGL|A Chain A, Hepatoselectivity Of Statins: Design And Synthesis Of 4-
Sulfamoyl Pyrroles As Hmg-Coa Reductase Inhibitors
pdb|3BGL|B Chain B, Hepatoselectivity Of Statins: Design And Synthesis Of 4-
Sulfamoyl Pyrroles As Hmg-Coa Reductase Inhibitors
pdb|3BGL|C Chain C, Hepatoselectivity Of Statins: Design And Synthesis Of 4-
Sulfamoyl Pyrroles As Hmg-Coa Reductase Inhibitors
pdb|3BGL|D Chain D, Hepatoselectivity Of Statins: Design And Synthesis Of 4-
Sulfamoyl Pyrroles As Hmg-Coa Reductase Inhibitors
pdb|2R4F|A Chain A, Substituted Pyrazoles As Hepatselective Hmg-Coa Reductase
Inhibitors
pdb|2R4F|B Chain B, Substituted Pyrazoles As Hepatselective Hmg-Coa Reductase
Inhibitors
pdb|2R4F|C Chain C, Substituted Pyrazoles As Hepatselective Hmg-Coa Reductase
Inhibitors
pdb|2R4F|D Chain D, Substituted Pyrazoles As Hepatselective Hmg-Coa Reductase
Inhibitors
pdb|3CCT|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCT|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCT|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCT|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCW|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCW|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCW|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCW|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCZ|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCZ|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCZ|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCZ|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD0|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD0|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD0|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD0|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD5|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD5|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD5|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD5|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD7|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD7|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD7|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD7|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDA|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDA|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDA|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDA|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDB|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDB|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDB|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDB|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
Length = 441
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 148/222 (66%), Gaps = 2/222 (0%)
Query: 136 DEDVVQSVIDGSIPSYALESKLGDCRRAAAIRREALQKMTGR--SLQGLPLDGFDYDSIL 193
D +++Q V IP+Y LE+ + R +IRR+ L K SLQ LP ++Y ++
Sbjct: 30 DAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQYLPYRDYNYSLVM 89
Query: 194 GQCCEMPVGYVQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCKAIYASGGAASML 253
G CCE +GY+ IPVG+AGPL LD E+ VPMATTEGCLVASTNRGC+AI GGA+S +
Sbjct: 90 GACCENVIGYMPIPVGVAGPLCLDEKEFQVPMATTEGCLVASTNRGCRAIGLGGGASSRV 149
Query: 254 LRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNL 313
L DGMTR P+VR A ++E+K +LE F + F+ +SRFARLQ + SIAG+NL
Sbjct: 150 LADGMTRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFDSTSRFARLQKLHTSIAGRNL 209
Query: 314 YIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISG 355
YIRF +GDAMGMNM+SKG + L L FP+M ++ +SG
Sbjct: 210 YIRFQSRSGDAMGMNMISKGTEKALSKLHEYFPEMQILAVSG 251
>pdb|3QAE|A Chain A, 3-Hydroxy-3-Methylglutaryl-Coenzyme A Reductase Of
Streptococcus Pneumoniae
pdb|3QAU|A Chain A, 3-Hydroxy-3-Methylglutaryl-Coenzyme A Reductase From
Streptococcus Pneumoniae
Length = 458
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 12/171 (7%)
Query: 191 SILGQCCEMPVGYVQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCKAIYASGG-- 248
++ Q E VG +P + +L++G EY+VP T E +VA+ + K I +GG
Sbjct: 77 TVADQLSENVVGTFSLPYSLVPEVLVNGQEYTVPYVTEEPSVVAAASYASKIIKRAGGFT 136
Query: 249 ----AASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHI 304
M+ + + + + A AS+ LE N + + R AR H+
Sbjct: 137 TQVHQRQMIGQVALYQVANPKLAQEKIASKKAELLELAN--QAYPSIVKRGG-GARDLHV 193
Query: 305 QCSIAGKN--LYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGI 353
+ I G+ L + T +AMG NM++ ++ + L+ ++GI
Sbjct: 194 E-QIKGEPDFLVVYIHVDTQEAMGANMLNTMLEALKPVLEELSQGQSLMGI 243
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 208 VGIAGPLLLDGFEYSVPMATTE---GCLVASTNRGCKAIYASGGAASMLLRDGMTR 260
+GI GP + GF +S P T G L++ T +G KA G + LLRD + R
Sbjct: 589 MGIKGPRMPLGFTFSFPCHQTNLDCGILISWT-KGFKATDCEGHDVASLLRDAVKR 643
>pdb|1YZH|A Chain A, Crystal Structure Of The Conserved Hypothetical Protein,
Methyltransferase From Streptococcus Pneumoniae Tigr4
pdb|1YZH|B Chain B, Crystal Structure Of The Conserved Hypothetical Protein,
Methyltransferase From Streptococcus Pneumoniae Tigr4
Length = 214
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 56 RWREKIRNSTPLHVVTLSEIAAIVSLIASFIYLLGFFGIDFVQSFISRA 104
+WR+ N P+HV S A VS A + + GID +S +S A
Sbjct: 33 KWRDLFGNDNPIHVEVGSGKGAFVSGXAKQNPDINYIGIDIQKSVLSYA 81
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 208 VGIAGPLLLDGFEYSVPMATTE---GCLVASTNRGCKAIYASGGAASMLLRDGMTR 260
+GI GP + GF +S P T G L+ T +G KA G LLRD + R
Sbjct: 589 MGIKGPRMPLGFTFSFPCQQTSLDAGILITWT-KGFKATDCVGHDVVTLLRDAIKR 643
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 208 VGIAGPLLLDGFEYSVPMATTE---GCLVASTNRGCKAIYASGGAASMLLRDGMTR 260
+GI GP + GF +S P T G L+ T +G KA G LLRD + R
Sbjct: 589 MGIKGPRMPLGFTFSFPCQQTSLDAGILITWT-KGFKATDCVGHDVVTLLRDAIKR 643
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 208 VGIAGPLLLDGFEYSVPMATTE---GCLVASTNRGCKAIYASGGAASMLLRDGMTR 260
+GI GP + GF +S P T G L+ T +G KA G LLRD + R
Sbjct: 589 MGIKGPRMPLGFTFSFPCQQTSLDAGILITWT-KGFKATDCVGHDVVTLLRDAIKR 643
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 208 VGIAGPLLLDGFEYSVPMATTE---GCLVASTNRGCKAIYASGGAASMLLRDGMTR 260
+GI GP + GF +S P T G L+ T +G KA G LLRD + R
Sbjct: 589 MGIKGPRMPLGFTFSFPCQQTSLDAGILITWT-KGFKATDCVGHDVVTLLRDAIKR 643
>pdb|1QAX|A Chain A, Ternary Complex Of Pseudomonas Mevalonii Hmg-Coa Reductase
With Hmg-Coa And Nad+
pdb|1QAX|B Chain B, Ternary Complex Of Pseudomonas Mevalonii Hmg-Coa Reductase
With Hmg-Coa And Nad+
pdb|1QAY|A Chain A, Ternary Complex Of Pseudomonas Mevalonii Hmg-Coa Reductase
With Mevalonate And Nad+
pdb|1QAY|B Chain B, Ternary Complex Of Pseudomonas Mevalonii Hmg-Coa Reductase
With Mevalonate And Nad+
pdb|1R31|A Chain A, Hmg-Coa Reductase From Pseudomonas Mevalonii Complexed
With Hmg-Coa
pdb|1R31|B Chain B, Hmg-Coa Reductase From Pseudomonas Mevalonii Complexed
With Hmg-Coa
pdb|1R7I|A Chain A, Hmg-Coa Reductase From P. Mevalonii, Native Structure At
2.2 Angstroms Resolution.
pdb|1R7I|B Chain B, Hmg-Coa Reductase From P. Mevalonii, Native Structure At
2.2 Angstroms Resolution.
pdb|1T02|A Chain A, Crystal Structure Of A Statin Bound To Class Ii Hmg-Coa
Reductase
pdb|1T02|B Chain B, Crystal Structure Of A Statin Bound To Class Ii Hmg-Coa
Reductase
Length = 428
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 182 LPLDGFDYDSILGQCCEMPVGYVQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCK 241
LP+D I E +G ++P +A ++G + VP+ E +VA+ + K
Sbjct: 42 LPMD------IANGMIENVIGTFELPYAVASNFQINGRDVLVPLVVEEPSIVAAASYMAK 95
Query: 242 AIYASGG 248
A+GG
Sbjct: 96 LARANGG 102
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,594,142
Number of Sequences: 62578
Number of extensions: 410316
Number of successful extensions: 1040
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1033
Number of HSP's gapped (non-prelim): 10
length of query: 387
length of database: 14,973,337
effective HSP length: 101
effective length of query: 286
effective length of database: 8,652,959
effective search space: 2474746274
effective search space used: 2474746274
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.6 bits)