BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016587
(386 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/397 (53%), Positives = 278/397 (70%), Gaps = 25/397 (6%)
Query: 1 MDAIMNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLL 60
MDA +NK++ DAYPK EDF +T G +T++S ++ML+LFFSEL+ YL +L
Sbjct: 1 MDA-LNKLKQFDAYPKTLEDFRIKTCGGATVTIISGLIMLILFFSELQYYLTKEVHPELF 59
Query: 61 VDTSRGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESR- 119
VDTSRG+ LRIN DV FP +PC+ LS+DAMD++GEQ LDV+H++FK+RLD G + +
Sbjct: 60 VDTSRGDKLRINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGQPVTTEA 119
Query: 120 --------QDGIGAPKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYR 171
++G+ P P + C SCYGAE+ D CCN C++VREAYR
Sbjct: 120 EKHDLGKEEEGVFDPSTLDPDR------------CESCYGAETDDLKCCNTCDDVREAYR 167
Query: 172 KKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGV 231
++GWA PD I+QCKREGF Q+++E++ EGC +YGFLEVNKVAGNFHFAPGKSF QS V
Sbjct: 168 RRGWAFKTPDTIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHV 227
Query: 232 HVHDILAFQRDSFNISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVY 291
HVHD+ +F D+ N++H I L+FG+ +PG+VNPLD S MYQYF+K+VPT+Y
Sbjct: 228 HVHDLQSFGLDNINMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIY 287
Query: 292 TDVSGHTIQSNQFSVTEHFRSSEQGRL--QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLT 349
G +++NQFSVT H + + G + Q LPGVF Y+LSP+ V FTE+ SF HFLT
Sbjct: 288 VKGDGEVVKTNQFSVTRHEKIA-NGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLT 346
Query: 350 NVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGKFS 386
VCAI+GGVFTV+G+ID+ IYH RAI+KKIE+GK S
Sbjct: 347 GVCAIIGGVFTVAGLIDSLIYHSARAIQKKIELGKAS 383
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/382 (53%), Positives = 276/382 (72%), Gaps = 5/382 (1%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
++++R DAYPK EDF +T G ++T++S ++ML+LFFSEL+ YL +L VD S
Sbjct: 4 LHRLRQFDAYPKTLEDFRVKTCGGALVTVISGLIMLILFFSELQYYLTKEIYPELFVDKS 63
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
RG+ L+IN DV FP +PC+ LS+DAMD++GEQ LDV+H++FK+RLD + S D
Sbjct: 64 RGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDKKPVTSEADRHE 123
Query: 125 APKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLID 184
K ++ + L+ N C SCYGAE+ D CCN C++VREAYR++GWA PD I+
Sbjct: 124 LGKSEEHVVFDPKSLDPNR--CESCYGAETDDFSCCNTCDDVREAYRRRGWAFKTPDSIE 181
Query: 185 QCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSF 244
QCKREGF Q+++E++ EGC +YGFLEVNKVAGNFHFAPGKSF QS VHVHD+ +F D+
Sbjct: 182 QCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNI 241
Query: 245 NISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQF 304
N++H+I L+FG +PG+VNPLDG S M+QYF+K+VPTVY V G +++NQF
Sbjct: 242 NMTHEIRHLSFGRDYPGLVNPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQF 301
Query: 305 SVTEHFRSSEQGRL--QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVS 362
SVT H + + G + Q LPGVF Y+LSP+ V TE+H SF HFLT VCAI+GGVFTV+
Sbjct: 302 SVTRHEKMT-NGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGVFTVA 360
Query: 363 GIIDAFIYHGQRAIKKKIEIGK 384
G+ID+ +Y+ RAI+KKIE+GK
Sbjct: 361 GLIDSLVYYSTRAIQKKIELGK 382
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/387 (54%), Positives = 279/387 (72%), Gaps = 10/387 (2%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
++++R DAYPK EDF +T G V+T++S ++ML+LFFSEL+ YL +L VD S
Sbjct: 4 LHRLRQFDAYPKTLEDFRVKTCGGAVVTVISGLIMLILFFSELQYYLTKEVYPELFVDKS 63
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
RG+ L+IN DV FP +PC+ LS+DAMD++GEQ LDV+H++FK+RLD + S D
Sbjct: 64 RGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDLDKKPVTSEADRHE 123
Query: 125 APKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLID 184
K ++ + L+ N C SCYGAE+ D CCN+C++VREAYR+KGWA PD I+
Sbjct: 124 LGKSEEQVVFDPKTLDPNR--CESCYGAETDDFSCCNSCDDVREAYRRKGWAFKTPDSIE 181
Query: 185 QCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHV-----HDILAF 239
QCKREGF Q+++E++ EGC +YGFLEVNKVAGNFHFAPGKSF QS VHV HD+ +F
Sbjct: 182 QCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSF 241
Query: 240 QRDSFNISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTI 299
D+ N++H+I L+FG+ +PG+VNPLDG S M+QYF+K+VPTVY V G +
Sbjct: 242 GLDNINMTHEIKHLSFGKDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVDGEVL 301
Query: 300 QSNQFSVTEHFRSSEQGRL--QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGG 357
++NQFSVT H + + G + Q LPGVF Y+LSP+ V FTE+H SF HFLT VCAI+GG
Sbjct: 302 RTNQFSVTRHEKMT-NGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAIIGG 360
Query: 358 VFTVSGIIDAFIYHGQRAIKKKIEIGK 384
VFTV+G+ID+ IY+ RAI+KKIE+GK
Sbjct: 361 VFTVAGLIDSLIYYSTRAIQKKIELGK 387
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/382 (55%), Positives = 276/382 (72%), Gaps = 6/382 (1%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
+ K++ DAYPK EDF +T G +T+VS ++MLLLF SEL+ YL +L VD S
Sbjct: 4 LGKLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKS 63
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
RG+ L+IN DV FP +PC+ LS+DAMD++GEQ LDV+H++FKKRLD G + S +
Sbjct: 64 RGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGVPVSSEAERHE 123
Query: 125 APKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLID 184
K++ + L+ N C SCYGAES D CCN+CE+VREAYR++GWA NPD I+
Sbjct: 124 LGKVEVTV-FDPNSLDPNR--CESCYGAESEDIKCCNSCEDVREAYRRRGWAFKNPDTIE 180
Query: 185 QCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSF 244
QC+REGF Q+++E++ EGC +YGFLEVNKVAGNFHFAPGKSF QS VHVHD+ +F D+
Sbjct: 181 QCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNI 240
Query: 245 NISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQF 304
N++H I L+FGE +PG+VNPLD T S M+QYF+KVVPTVY V G +++NQF
Sbjct: 241 NMTHYIKHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQF 300
Query: 305 SVTEHFRSSEQGRL--QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVS 362
SVT H + + G L Q LPGVF Y+LSP+ V TE+H SF HFLT VCAI+GG+FTV+
Sbjct: 301 SVTRHEKVA-NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 359
Query: 363 GIIDAFIYHGQRAIKKKIEIGK 384
G+ID+ IYH RAI+KKI++GK
Sbjct: 360 GLIDSLIYHSARAIQKKIDLGK 381
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/382 (54%), Positives = 273/382 (71%), Gaps = 6/382 (1%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
+ K++ DAYPK EDF +T G +T+VS ++MLLLF SEL+ YL +L VD S
Sbjct: 4 LGKLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKS 63
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
RG+ L+IN DV FP +PC+ LS+DAMD++GEQ LDV+H++FK+RLD G + S +
Sbjct: 64 RGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSEAERHE 123
Query: 125 APKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLID 184
K++ + + C SCYGAE+ D CCN CE+VREAYR++GWA NPD I+
Sbjct: 124 LGKVEVTVFDPDSL---DPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGWAFKNPDTIE 180
Query: 185 QCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSF 244
QC+REGF Q+++E++ EGC +YGFLEVNKVAGNFHFAPGKSF QS VHVHD+ +F D+
Sbjct: 181 QCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNI 240
Query: 245 NISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQF 304
N++H I L+FGE +PG+VNPLD T S M+QYF+KVVPTVY V G +++NQF
Sbjct: 241 NMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQF 300
Query: 305 SVTEHFRSSEQGRL--QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVS 362
SVT H + + G L Q LPGVF Y+LSP+ V TE+H SF HFLT VCAI+GG+FTV+
Sbjct: 301 SVTRHEKVA-NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 359
Query: 363 GIIDAFIYHGQRAIKKKIEIGK 384
G+ID+ IYH RAI+KKI++GK
Sbjct: 360 GLIDSLIYHSARAIQKKIDLGK 381
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/382 (54%), Positives = 272/382 (71%), Gaps = 6/382 (1%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
+ K++ DAYPK EDF +T G +T+VS ++MLLLF SEL+ YL +L VD S
Sbjct: 4 LGKLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKS 63
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
RG+ L+IN DV FP +PC+ LS+DAMD++GEQ LDV+H++FK+RLD G + S +
Sbjct: 64 RGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSEAERHE 123
Query: 125 APKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLID 184
K++ + + C SCYGAE+ D CCN CE+VRE YR++GWA NPD I+
Sbjct: 124 LGKVEVTVFDPDSL---DPDRCESCYGAEAEDIKCCNTCEDVRETYRRRGWAFKNPDTIE 180
Query: 185 QCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSF 244
QC+REGF Q+++E++ EGC +YGFLEVNKVAGNFHFAPGKSF QS VHVHD+ +F D+
Sbjct: 181 QCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNI 240
Query: 245 NISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQF 304
N++H I L+FGE +PG+VNPLD T S M+QYF+KVVPTVY V G +++NQF
Sbjct: 241 NMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQF 300
Query: 305 SVTEHFRSSEQGRL--QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVS 362
SVT H + + G L Q LPGVF Y+LSP+ V TE+H SF HFLT VCAI+GG+FTV+
Sbjct: 301 SVTRHEKVA-NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 359
Query: 363 GIIDAFIYHGQRAIKKKIEIGK 384
G+ID+ IYH RAI+KKI++GK
Sbjct: 360 GLIDSLIYHSARAIQKKIDLGK 381
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/386 (54%), Positives = 273/386 (70%), Gaps = 14/386 (3%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
+ K++ DAYPK EDF +T G +T+VS ++MLLLF SEL+ YL +L VD S
Sbjct: 4 LGKLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKS 63
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQD--- 121
RG+ L+IN +V FP +PC+ LS+DAMD++GEQ LDV+H++FKKRLD G + S +
Sbjct: 64 RGDKLKININVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGFPVSSEAERHE 123
Query: 122 -GIGAPKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNP 180
G K+ P R C SCYGAE D CCN+CE+VREAYR++GWA NP
Sbjct: 124 LGKVEVKVFDPDSLDPDR-------CESCYGAEMEDIKCCNSCEDVREAYRRRGWAFKNP 176
Query: 181 DLIDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQ 240
D I+QC+REGF Q+++E++ EGC +YGFLEVNKVAGNFHFAPGKSF QS VHVHD+ +F
Sbjct: 177 DTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFG 236
Query: 241 RDSFNISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQ 300
D+ N++H I L+FGE +PG+VNPLD T S M+QYF+KVVPTVY V G ++
Sbjct: 237 LDNINMTHYIRHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLR 296
Query: 301 SNQFSVTEHFRSSEQGRL--QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGV 358
+NQFSVT H + + G + Q LPGVF Y+LSP+ V TE+H SF HFLT VCAI+GG+
Sbjct: 297 TNQFSVTRHEKVA-NGLMGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355
Query: 359 FTVSGIIDAFIYHGQRAIKKKIEIGK 384
FTV+G+ID+ IYH RAI+KKI++GK
Sbjct: 356 FTVAGLIDSLIYHSARAIQKKIDLGK 381
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/382 (54%), Positives = 273/382 (71%), Gaps = 7/382 (1%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
+ K++ DAYPK EDF +T G +T+VS ++MLLLF SEL+ YL +L VD S
Sbjct: 4 LGKLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKS 63
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
RG+ L+IN DV FP +PC+ LS+DAMD++GEQ LDV+H++FK+RLD G + S +
Sbjct: 64 RGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGTPVSSEAERHE 123
Query: 125 APKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLID 184
K++ + G + C SCYGAE+ D CCN CE+VREAYR++G A NPD I+
Sbjct: 124 LGKVEVTV---FGPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRG-AFKNPDTIE 179
Query: 185 QCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSF 244
QC+REGF Q+++E++ EGC +YGFLEVNKVAGNFHFAPGKSF QS VHVHD+ +F D+
Sbjct: 180 QCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNI 239
Query: 245 NISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQF 304
N++H I L+FGE +PG+VNPLD T S M+QYF+KVVPTVY V G +++NQF
Sbjct: 240 NMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQF 299
Query: 305 SVTEHFRSSEQGRL--QTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVS 362
SVT H + + G L Q LPGVF Y+LSP+ V TE+H SF HFLT VCAI+GG+FTV+
Sbjct: 300 SVTRHEKVA-NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 358
Query: 363 GIIDAFIYHGQRAIKKKIEIGK 384
G+ID+ IYH RAI+KKI++GK
Sbjct: 359 GLIDSLIYHSARAIQKKIDLGK 380
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/387 (50%), Positives = 269/387 (69%), Gaps = 13/387 (3%)
Query: 4 IMNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDT 63
++++++ DAYPK +DF +T++G +++++ + +L LFFS++ LY + +L VDT
Sbjct: 2 LISQLKKFDAYPKTVDDFRVKTYTGAIVSIIGGVFILWLFFSQVTLYFSTDIHHELFVDT 61
Query: 64 SRGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGI 123
+RGE L+IN D+TF LPC+ LS+DAMD+SGE DV H+IFKKRL G I I
Sbjct: 62 TRGEKLKINMDITFHHLPCAYLSLDAMDVSGEHQFDVAHNIFKKRLSPTGQPI------I 115
Query: 124 GAPKI-DKPLQRHGGRLEHNETY-CGSCYGAESSDED--CCNNCEEVREAYRKKGWALSN 179
AP I ++ + + ++N+ CGSCYGAE + CCN CEEVR AY KKGW L +
Sbjct: 116 EAPPIREEEINKKESVKDNNDVVGCGSCYGAEDPSKGIGCCNTCEEVRVAYSKKGWGL-D 174
Query: 180 PDLIDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAF 239
P I QC REGF + + E+ GEGC +YGF+ VNKVAGNFHFAPGKSF Q +HVHD+ F
Sbjct: 175 PSGIPQCIREGFTKNLVEQNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPF 234
Query: 240 QRDSFNISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTI 299
+ SFN+SH IN+L+FG FPG+ NPLD V T+ GM+QYF+KVVPT+Y ++G+ I
Sbjct: 235 KDGSFNVSHTINRLSFGNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRI 294
Query: 300 QSNQFSVTEHFR--SSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGG 357
+NQ+SVTEH+R + + LPG+FF YDLSPI + +E SF FLTNVCAI+GG
Sbjct: 295 ATNQYSVTEHYRLLAKKGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGG 354
Query: 358 VFTVSGIIDAFIYHGQRAIKKKIEIGK 384
VFTV GI D+FIY+ + ++KKI++GK
Sbjct: 355 VFTVFGIFDSFIYYSTKNLQKKIDLGK 381
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 214/394 (54%), Gaps = 35/394 (8%)
Query: 8 IRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTSRGE 67
+R DA+ K ED +T SGG+ITLVS ++++ + E Y + +++V+ S G+
Sbjct: 7 LRRFDAFQKTVEDARIKTASGGLITLVSGLIVIFIVLMEWINYRRVIAVHEIIVNPSHGD 66
Query: 68 TLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIGAPK 127
+ INF++TFP +PC IL+VD +D+SGE D+ H + K RL G +I IG
Sbjct: 67 RMEINFNITFPRIPCQILTVDVLDVSGEFQRDIHHTVSKTRLSPSGEIISVDDLDIGN-- 124
Query: 128 IDKPLQRHGGRLEHNETYCGSCYGAES-SDED---CCNNCEEVREAYRKKGWALSNPDLI 183
+ + G CG CYGA + ED CCN C+ VR+AY K W + + D
Sbjct: 125 -QQSISDDGA------AECGDCYGAADFAPEDTPGCCNTCDAVRDAYGKAHWRIGDVDAF 177
Query: 184 DQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAF--QR 241
QCK E F + + ++ EGCN+ G L VN++AGNFH APG+S HVHD + +
Sbjct: 178 KQCKDENFKELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYINEL 237
Query: 242 DSFNISHKINKLAFGEHFPGVV---NPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHT 298
D ++SH I+ L+FG V NPLDG T Y+YFIK V + +S T
Sbjct: 238 DLHDMSHSIHHLSFGPPLDASVHYSNPLDGTVKKVSTADYRYEYFIKCVSYQFMPLSKST 297
Query: 299 --IQSNQFSVTEHFRSSEQGRLQT----------LPGVFFFYDLSPIKVTFTEEHV---S 343
I +N+++VT+H RS GR + +PGV+F +D+SP++V E V +
Sbjct: 298 LPIDTNKYAVTQHERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRV--IERQVRGNT 355
Query: 344 FLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIK 377
F FL+NV A++GG T++ +D Y Q+ K
Sbjct: 356 FGGFLSNVLALLGGCVTLASFVDRGYYEVQKLKK 389
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 238 bits (606), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 215/417 (51%), Gaps = 59/417 (14%)
Query: 10 SLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTSRGETL 69
SLDA+ K ED RT +GG+ITL + L L +E + + VT +L+VD R L
Sbjct: 8 SLDAFAKTEEDVRVRTRAGGLITLSCILTTLFLLVNEWGQFNSVVTRPQLVVDRDRHAKL 67
Query: 70 RINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFK-KRLDSQG----NVIESRQDGIG 124
+N DVTFP++PC ++++D MD SGE LD+ F RL+S+G + E G G
Sbjct: 68 ELNMDVTFPSMPCDLVNLDIMDDSGEMQLDILDAGFTMSRLNSEGRPVGDATELHVGGNG 127
Query: 125 ---APKIDKPLQRHGGRLEHNETYCGSCYGAESSDED---------CCNNCEEVREAYRK 172
AP + P YCG CYGA+ ++ CC +C+ VR AY +
Sbjct: 128 DGTAPVNNDP------------NYCGPCYGAKDQSQNENLAQEEKVCCQDCDAVRSAYLE 175
Query: 173 KGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVH 232
GWA + I+QC+REG++ +I E EGC I G ++N++ GN HFAPGK + + H
Sbjct: 176 AGWAFFDGKNIEQCEREGYVSKINEHLNEGCRIKGSAQINRIQGNLHFAPGKPYQNAYGH 235
Query: 233 VHDILAFQRDS-FNISHKINKLAFGE--------------HFPGVV--NPLDGVRWTQET 275
HD + + S N +H IN L+FG+ H VV +PLDG + +
Sbjct: 236 FHDTSLYDKTSNLNFNHIINHLSFGKPIQSHSKLLGNDKRHGGAVVATSPLDGRQVFPDR 295
Query: 276 PSGMYQ--YFIKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRLQT----------LPG 323
+ +Q YF K+VPT Y + I++ QFS T H R GR + +PG
Sbjct: 296 NTHFHQFSYFAKIVPTRYEYLDNVVIETAQFSATFHSRPLAGGRDKDHPNTLHVRGGIPG 355
Query: 324 VFFFYDLSPIKVTFTEEH-VSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKK 379
+F F+++SP+KV E+H ++ F+ N +GGV V ++D Y QR+I K
Sbjct: 356 MFVFFEMSPLKVINKEQHGQTWSGFILNCITSIGGVLAVGTVMDKLFYKAQRSIWGK 412
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 174/364 (47%), Gaps = 44/364 (12%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
++ ++ LDA+PK+ + + + SGG ++L++ M LL E +Y + + + VD
Sbjct: 10 LSLVKELDAFPKVPDSYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKD 69
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
LRIN D+T A+ C + D +D++ +++ + + Q
Sbjct: 70 FSSKLRINIDITV-AMKCQYVGADVLDLAETMVASTDGLVYEPAIFDLSPQQKEWQ---- 124
Query: 125 APKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLID 184
+ LQR RL+ E S +D + ++ AL P D
Sbjct: 125 -----RMLQRIQSRLQ-----------EEHSLQDVI-----FKSTFKSASTAL--PPRED 161
Query: 185 QCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSF 244
+ + C I+G L VNKVAGNFH GK+ H H DS+
Sbjct: 162 DSS----------QPPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHDSY 211
Query: 245 NISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPT-VYT-DVSGHTIQSN 302
N SH+I+ L+FGE PG++NPLDG + M+QYFI VVPT ++T +S T +
Sbjct: 212 NFSHRIDHLSFGELVPGIINPLDGTEKIALDHNQMFQYFITVVPTKLHTYKISADT---H 268
Query: 303 QFSVTEHFRS-SEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTV 361
QFSVTE R + + G+F YDLS + VT TEEH+ F F +C IVGG+F+
Sbjct: 269 QFSVTERERVINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFST 328
Query: 362 SGII 365
+G++
Sbjct: 329 TGML 332
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 174/367 (47%), Gaps = 50/367 (13%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
++ ++ LDA+PK+ + + + SGG ++L++ M LL E +Y + + + VD
Sbjct: 10 LSLVKELDAFPKVPDSYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKD 69
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
LRIN D+T A+ C + D +D++ + + DG+
Sbjct: 70 FSSKLRINIDITV-AMKCHYVGADVLDLA--------------------ETMVASADGLA 108
Query: 125 -APKI--DKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPD 181
P + P QR R+ S E S +D + A++ AL P
Sbjct: 109 YEPALFDLSPQQREWQRMLQ---LIQSRLQEEHSLQDVI-----FKSAFKSASTAL--PP 158
Query: 182 LIDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQR 241
D + C I+G L VNKVAGNFH GK+ H H
Sbjct: 159 REDDSSLTP----------DACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNH 208
Query: 242 DSFNISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPT-VYT-DVSGHTI 299
DS+N SH+I+ L+FGE PG++NPLDG + M+QYFI VVPT ++T +S T
Sbjct: 209 DSYNFSHRIDHLSFGELVPGIINPLDGTEKIAVDHNQMFQYFITVVPTKLHTYKISADT- 267
Query: 300 QSNQFSVTEHFR-SSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGV 358
+QFSVTE R + + G+F YDLS + VT TEEH+ F F +C I+GG+
Sbjct: 268 --HQFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIIGGI 325
Query: 359 FTVSGII 365
F+ +G++
Sbjct: 326 FSTTGML 332
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 173/366 (47%), Gaps = 48/366 (13%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
++ ++ LDA+PK+ E + + SGG ++L++ M LL E +Y + + + VD
Sbjct: 10 LSLVKELDAFPKVPESYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKD 69
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
LRIN D+T A+ C + D +D++ ++ S +
Sbjct: 70 FSSKLRINIDITV-AMKCQYVGADVLDLAE-------------------TMVASADGLVY 109
Query: 125 APKI--DKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDL 182
P + P Q+ R+ S E S +D + A++ AL P
Sbjct: 110 EPAVFDLSPQQKEWQRMLQ---LTQSRLQEEHSLQDVI-----FKSAFKSASTAL--PPR 159
Query: 183 IDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRD 242
D + + C I+G L VNKVAGNFH GK+ H H +
Sbjct: 160 EDDSS----------QSPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHE 209
Query: 243 SFNISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPT-VYT-DVSGHTIQ 300
S+N SH+I+ L+FGE P ++NPLDG + M+QYFI VVPT ++T +S T
Sbjct: 210 SYNFSHRIDHLSFGELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISADT-- 267
Query: 301 SNQFSVTEHFR-SSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVF 359
+QFSVTE R + + G+F YDLS + VT TEEH+ F F +C IVGG+F
Sbjct: 268 -HQFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIF 326
Query: 360 TVSGII 365
+ +G++
Sbjct: 327 STTGML 332
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 172/366 (46%), Gaps = 48/366 (13%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
++ ++ LDA+PK+ E + + SGG ++L++ M LL E +Y + + + VD
Sbjct: 10 LSLVKELDAFPKVPESYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKD 69
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
LRIN D+T A+ C + D +D++ ++ S +
Sbjct: 70 FSSKLRINIDITV-AMKCQYVGADVLDLAE-------------------TMVASADGLVY 109
Query: 125 APKI--DKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDL 182
P + P Q+ R+ S E S +D + A++ AL P
Sbjct: 110 EPTVFDLSPQQKEWQRMLQ---LIQSRLQEEHSLQDVI-----FKSAFKSTSTAL--PPR 159
Query: 183 IDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRD 242
D + C I+G L VNKVAGNFH GK+ H H +
Sbjct: 160 EDDSS----------QSPNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHE 209
Query: 243 SFNISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPT-VYT-DVSGHTIQ 300
S+N SH+I+ L+FGE P ++NPLDG + M+QYFI VVPT ++T +S T
Sbjct: 210 SYNFSHRIDHLSFGELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISADT-- 267
Query: 301 SNQFSVTEHFR-SSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVF 359
+QFSVTE R + + G+F YDLS + VT TEEH+ F F +C IVGG+F
Sbjct: 268 -HQFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIF 326
Query: 360 TVSGII 365
+ +G++
Sbjct: 327 STTGML 332
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 158 bits (400), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 171/372 (45%), Gaps = 53/372 (14%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
+N +R LDA+PK+ E + T SGG ++L++ M LL F E +Y + + + VD
Sbjct: 10 LNFVRELDAFPKVPESYVETTASGGTVSLLAFTAMALLAFFEFFVYRDTWMKYEYEVDKD 69
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
LRIN D+T A+ C + D + D+ + + S G V E +
Sbjct: 70 FTSKLRINIDITV-AMRCQFVGADVL------------DLAETMVASDGLVYEPVVFDLS 116
Query: 125 APKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDLID 184
P QR L H E ++ ++V KG + P D
Sbjct: 117 ------PQQR----LWHRTLLLIQGRLREE------HSLQDVLFKNVMKGSPTALPPRED 160
Query: 185 QCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSF 244
+ C I+G L VNKVAGNFH GK+ H H +++
Sbjct: 161 D----------PNQPLNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVSHETY 210
Query: 245 NISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPT------VYTDVSGHT 298
N SH+I+ L+FGE PG++NPLDG + M+QYFI +VPT VY D
Sbjct: 211 NFSHRIDHLSFGEEIPGILNPLDGTEKVSADHNQMFQYFITIVPTKLQTYKVYAD----- 265
Query: 299 IQSNQFSVTEHFRS-SEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGG 357
++Q+SVTE R + + G+F YD+S + V TE+H+ F FL +C I+GG
Sbjct: 266 --THQYSVTERERVINHAAGSHGVSGIFMKYDISSLMVKVTEQHMPFWQFLVRLCGIIGG 323
Query: 358 VFTVSGIIDAFI 369
+F+ +G++ +
Sbjct: 324 IFSTTGMLHNLV 335
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 107/200 (53%), Gaps = 22/200 (11%)
Query: 194 RIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKL 253
++ G GC G +NKV GNFH V H A Q S +++H I+KL
Sbjct: 106 KVPLNNGHGCRFEGEFSINKVPGNFH-----------VSTHSATA-QPQSPDMTHIIHKL 153
Query: 254 AFG-----EHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVT- 307
AFG +H G N L G Q + Y +K+VPTVY ++ G S Q++V
Sbjct: 154 AFGAKLQVQHVQGAFNALGGADRLQSNALASHDYILKIVPTVYEELGGKQRFSYQYTVAN 213
Query: 308 -EHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIID 366
E+ S GR+ +P ++F YDLSPI V +TE F F+T +CAI+GG FTV+GIID
Sbjct: 214 KEYVAYSHTGRI--IPAIWFRYDLSPITVKYTERRRPFYRFITTICAIIGGTFTVAGIID 271
Query: 367 AFIYHGQRAIKKKIEIGKFS 386
+ I+ A KKI+IGK S
Sbjct: 272 SCIFTASEAW-KKIQIGKMS 290
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 8 IRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLV---DTS 64
+R D Y K+ +D T++G I++ + ML LF SEL ++ +L V D
Sbjct: 5 VRRFDIYRKVPKDLTQPTYTGAFISICCCVFMLFLFLSELTGFIATEIVNELYVDDPDKD 64
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHL 98
G + ++ +++ P L C ++ +D D G +
Sbjct: 65 SGGKIDVSLNISLPNLHCDLVGLDIQDEMGRHEV 98
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 168/365 (46%), Gaps = 73/365 (20%)
Query: 8 IRSLDAYPKINEDFYSRTFS-GGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTSRG 66
IR+ DA+PK ++++ ++ S GG T++ S+++++L FS+ Y+ + E +L + S
Sbjct: 10 IRAFDAFPKFSKEYRRQSSSRGGFFTILLSVLIVVLVFSQCVQYIRGIREQELFIYDSVS 69
Query: 67 ETLRINFDVTFPALPCSILSVDAMDISGEQHLDVK----HDIFKKRLDSQGNVIESRQDG 122
E + +N D+T A+PCS L +D +D + + L + + F K + + + +
Sbjct: 70 ELMDLNIDITI-AMPCSNLRIDVVDRTKDLVLATEALTLEEAFIKDMPTSSTIYK----- 123
Query: 123 IGAPKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGWALSNPDL 182
N+ Y G + E +RKK A
Sbjct: 124 -------------------NDRYAGLRWART--------------EKFRKKNNA------ 144
Query: 183 IDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHF-APGKSFHQSGVHVHDILAFQR 241
+ G C IYG L VN+V G H APG + +S + H
Sbjct: 145 -------------EPGSGTACRIYGQLVVNRVNGQLHITAPGWGYGRSNIPFH------- 184
Query: 242 DSFNISHKINKLAFGEHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQS 301
S N +H I +L+FGE++P +VN LDG +QY++ V+PT Y S + ++
Sbjct: 185 -SLNFTHYIEELSFGEYYPALVNALDGHYGHANDHPFAFQYYLSVLPTSYKS-SFRSFET 242
Query: 302 NQFSVTEHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTV 361
NQ+S+TE+ + G PG+F YDL P+ V ++H + L + AI GG+ TV
Sbjct: 243 NQYSLTENSVVRQLGFGSLPPGIFIDYDLEPLAVRVVDKHPNVASTLLRILAISGGLITV 302
Query: 362 SGIID 366
+ I+
Sbjct: 303 ASWIE 307
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 22/198 (11%)
Query: 194 RIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKL 253
+I G GC G +NKV GNFH V H A Q + +++H I+KL
Sbjct: 106 KIPLNNGAGCRFEGQFSINKVPGNFH-----------VSTHSATA-QPQNPDMTHTIHKL 153
Query: 254 AFG-----EHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVT- 307
+FG ++ G N L G P + Y +K+VPTVY D SG S Q++V
Sbjct: 154 SFGDTLQVQNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVAN 213
Query: 308 -EHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIID 366
E+ S GR+ +P ++F YDLSPI V +TE F+T +CAI+GG FTV+GI+D
Sbjct: 214 KEYVAYSHTGRI--IPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILD 271
Query: 367 AFIYHGQRAIKKKIEIGK 384
+ I+ A KKI++GK
Sbjct: 272 SCIFTASEAW-KKIQLGK 288
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 9 RSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLV---DTSR 65
R D Y K+ +D T++G +I++ + +L LF SEL ++ +L V D
Sbjct: 6 RRFDIYRKVPKDLTQPTYTGAIISICCCLFILFLFLSELTGFITTEVVNELYVDDPDKDS 65
Query: 66 GETLRINFDVTFPALPCSILSVDAMDISGEQ---HLD 99
G + ++ +++ P L C ++ +D D G H+D
Sbjct: 66 GGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHID 102
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 22/199 (11%)
Query: 194 RIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKL 253
+I G GC G +NKV GNFH V H A Q + +++H I+KL
Sbjct: 106 KIPLNNGAGCRFEGQFSINKVPGNFH-----------VSTHSATA-QPQNPDMTHVIHKL 153
Query: 254 AFG-----EHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVT- 307
+FG ++ G N L G P + Y +K+VPTVY D SG S Q++V
Sbjct: 154 SFGDTLQVQNIHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVAN 213
Query: 308 -EHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIID 366
E+ S GR+ +P ++F YDLSPI V +TE F+T +CAI+GG FTV+GI+D
Sbjct: 214 KEYVAYSHTGRI--IPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILD 271
Query: 367 AFIYHGQRAIKKKIEIGKF 385
+ I+ A KKI++GK
Sbjct: 272 SCIFTASEAW-KKIQLGKM 289
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 9 RSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLV---DTSR 65
R D Y K+ +D T++G +I++ + +L LF SEL ++ +L V D
Sbjct: 6 RRFDIYRKVPKDLTQPTYTGAIISICCCLFILFLFLSELTGFITTEVVNELYVDDPDKDS 65
Query: 66 GETLRINFDVTFPALPCSILSVDAMDISGEQ---HLD 99
G + ++ +++ P L C ++ +D D G H+D
Sbjct: 66 GGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHID 102
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 193 QRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINK 252
+I GC G +NKV GNFH V H +A Q + ++ H I+K
Sbjct: 105 MKIPINNAYGCRFEGLFSINKVPGNFH-----------VSTHSAIA-QPANPDMRHIIHK 152
Query: 253 LAFG-----EHFPGVVNPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVT 307
L+FG ++ G N L G + Y +K+VPTVY D++G S Q++V
Sbjct: 153 LSFGNTLQVDNIHGAFNALGGADKLASKALESHDYVLKIVPTVYEDLNGKQQFSYQYTVA 212
Query: 308 E--HFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGII 365
+ S GR+ +P ++F YDLSPI V +TE F+T VCAI+GG FTV+GI+
Sbjct: 213 NKAYVAYSHTGRV--VPAIWFRYDLSPITVKYTERRQPMYRFITTVCAIIGGTFTVAGIL 270
Query: 366 DAFIYHGQRAIKKKIEIGKF 385
D+FI+ A KKI++GK
Sbjct: 271 DSFIFTASEA-WKKIQLGKM 289
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 9 RSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLV---DTSR 65
R D Y K+ +D T++G +I++ + + LF SEL ++ +L V D
Sbjct: 6 RRFDIYRKVPKDLTQPTYTGAIISICCCLFITFLFLSELTGFIANEIVNELYVDDPDKDS 65
Query: 66 GETLRINFDVTFPALPCSILSVDAMDISGEQ---HLD 99
G + + +VT P LPC ++ +D D G H+D
Sbjct: 66 GGKIDVTLNVTLPNLPCEVVGLDIQDEMGRHEVGHID 102
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 160/362 (44%), Gaps = 65/362 (17%)
Query: 5 MNKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTS 64
M +++ DA+PK E + ++ GG+ +L++ + +L + ++E Y + + +VD+
Sbjct: 1 MAGLKTFDAFPKTEEQYKKKSTKGGLTSLLTYLFLLFIAWTEFGEYFGGYIDQQYVVDSQ 60
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDI---------FKKRLDSQGNV 115
+T++IN D+ + C L ++ D Q +D K + F D++ N
Sbjct: 61 VRDTVQINMDI-YVNTKCDWLQINVRD----QTMDRKLVLEELQLEEMPFFIPYDTKVND 115
Query: 116 IESRQDGIGAPKIDKPLQRHGGRLEHNETYCGSCYGAESSDEDCCNNCEEVREAYRKKGW 175
I I P++D+ L G AE +R+K
Sbjct: 116 INE----IITPELDEIL--------------GEAIPAE----------------FREK-- 139
Query: 176 ALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHD 235
L D+ + E GC+++G + VN+V+G KS G
Sbjct: 140 -LDTRSFFDESDP----NKAHLPEFNGCHVFGSIPVNRVSGELQIT-AKSL---GYVASR 190
Query: 236 ILAFQRDSFNISHKINKLAFGEHFPGVVNPLDG-VRWTQETPSGMYQYFIKVVPTVYTDV 294
+ FN H IN+ +FG+ +P + NPLD ++ Q+ P Y Y+ VVPT++ +
Sbjct: 191 KAPLEELKFN--HVINEFSFGDFYPYIDNPLDNTAQFNQDEPLTTYVYYTSVVPTLFKKL 248
Query: 295 SGHTIQSNQFSVTEH--FRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVC 352
G + +NQ+SV ++ + +PG+FF Y+ P+ + ++ +SF+ FL +
Sbjct: 249 -GAEVDTNQYSVNDYRYLYKDVAAKGDKMPGIFFKYNFEPLSIVVSDVRLSFIQFLVRLV 307
Query: 353 AI 354
AI
Sbjct: 308 AI 309
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 33/201 (16%)
Query: 202 GCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEH--- 258
GC + G++ V KV GN + +SG H +F N+SH +N L+FG
Sbjct: 293 GCRVEGYMRVKKVPGNLMVSA-----RSGSH-----SFDSSQMNMSHVVNHLSFGRRIMP 342
Query: 259 -----------FPGVV-NPLDGVRWTQET---PSGMYQYFIKVVPTVYTDVSGHTIQSNQ 303
+ G+ + LDG + + P+ ++++++V T +G +
Sbjct: 343 QKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVTIEHYLQIVKTEVVKSNGQAL-VEA 401
Query: 304 FSVTEHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSG 363
+ T H S LP F ++LSP++V TE SF HF+TNVCAI+GGVFTV+G
Sbjct: 402 YEYTAH---SSVAHSYYLPVAKFHFELSPMQVLITENSKSFSHFITNVCAIIGGVFTVAG 458
Query: 364 IIDAFIYHGQRAIKKKIEIGK 384
I+D+ ++H + KKIE+GK
Sbjct: 459 ILDSILHHSM-TLMKKIELGK 478
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 6 NKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVDTSR 65
+KI+S+D Y KI D + SG +++++++ M+ LF EL YL T T ++VD S
Sbjct: 5 SKIKSVDFYRKIPRDLTEASLSGAGLSIIAALSMIFLFGMELNNYLAVSTSTSVIVDRSA 64
Query: 66 -GETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQ 112
G+ LR++F+++FP+L C SVD D+ G L+V I K +DS
Sbjct: 65 DGDFLRLDFNISFPSLSCEFASVDVSDVLGTNRLNVTKTIRKFSIDSN 112
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 202 GCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRDSFNISHKINKLAFGEHF-P 260
GC + G++ V KV GN + SG H +F N+SH ++ +FG P
Sbjct: 293 GCRVEGYVRVKKVPGNLVISA-----HSGAH-----SFDSSQMNMSHVVSHFSFGRMISP 342
Query: 261 GVV--------------NPLDGVRWTQETPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSV 306
++ + LDG + + G + TV T+V +
Sbjct: 343 RLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGANVTIEHYLQTVKTEVITRRSGQEHSLI 402
Query: 307 TEHFRSSEQGRLQT--LPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGI 364
E+ ++ QT LP F ++LSP+++ TE SF HF+TN+CAI+GGVFTV+GI
Sbjct: 403 EEYEYTAHSSVAQTYYLPVAKFHFELSPMQILITENPKSFSHFITNLCAIIGGVFTVAGI 462
Query: 365 IDAFIYHGQRAIKKKIEIGK 384
+D+ I+H + KK+E+GK
Sbjct: 463 LDS-IFHNTVRLVKKVELGK 481
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 7 KIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVD-TSR 65
K++S+D Y KI D + SG +++V+++ M+ LF EL YL T T ++VD +S
Sbjct: 6 KLKSVDFYRKIPRDLTEASLSGAGLSIVAALFMMFLFGMELSSYLEVNTTTAVIVDKSSD 65
Query: 66 GETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLD 110
G+ LRI+F+++FPAL C SVD D+ G L++ + K +D
Sbjct: 66 GDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFPID 110
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 44/224 (19%)
Query: 183 IDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQRD 242
+D KR L GC I GF+ V KV G+ + +SG H +F
Sbjct: 282 VDPAKRPAPLT-------SGCRIEGFVRVKKVPGSVVISA-----RSGSH-----SFDPS 324
Query: 243 SFNISHKINKLAFGEHFPGV-------VNPLDG------------VRWTQETPSGMYQYF 283
N+SH + + +FG+ + P G V+ + +++
Sbjct: 325 QINVSHYVTQFSFGKRLSAKMFNELKRLTPYVGGHHDRLAGQSYIVKHGDVNANVTIEHY 384
Query: 284 IKVVPTVYTDVSGHTIQSNQFSVTEHFRSSEQGRLQ---TLPGVFFFYDLSPIKVTFTEE 340
+++V T + S + + E + + L +P V F ++ SP++V TE
Sbjct: 385 LQIVKTELVTLRS----SKELKLVEEYEYTAHSSLVHSFYVPVVKFHFEPSPMQVLVTEL 440
Query: 341 HVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 384
SF HF+TNVCAI+GGVFTV+GI+D+ I+H + KK+E+GK
Sbjct: 441 PKSFSHFITNVCAIIGGVFTVAGILDS-IFHNTLRLVKKVELGK 483
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 6 NKIRSLDAYPKINEDFYSRTFSGGVITLVSSIVMLLLFFSELRLYLNAVTETKLLVD-TS 64
+K++S+D Y KI D + SG +++V+++ M+ LF EL YL T T ++VD +S
Sbjct: 5 SKLKSVDFYRKIPRDLTEASLSGAGLSIVAALAMVFLFGMELSNYLAVNTSTSVIVDRSS 64
Query: 65 RGETLRINFDVTFPALPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGNVIESRQDGIG 124
GE LRI+F+++FPAL C SVD D+ G L++ + K +D N++ + +
Sbjct: 65 DGEFLRIDFNLSFPALSCEFASVDVSDVLGTNRLNITKTVRKYSIDR--NLVPTGSEFHP 122
Query: 125 APKIDKPLQRHGGRLEHN 142
P + +HG +E N
Sbjct: 123 GPI--PTVSKHGDDVEEN 138
>sp|A0R2G4|DAPE_MYCS2 Succinyl-diaminopimelate desuccinylase OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=dapE PE=3 SV=1
Length = 355
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 183 IDQCK-REGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDILAFQR 241
ID C REG L ++ + G N+ + V NF FAP + Q+ HVH++
Sbjct: 212 IDGCVYREG-LSAVRIDGGIAGNV--IPDAASVTVNFRFAPDRDVDQAVAHVHEVF---- 264
Query: 242 DSFNISHKINKLAFGEHFPGVVNP 265
D +++ ++ A G PG+ P
Sbjct: 265 DGLDVTLELTDAAAGA-LPGLTQP 287
>sp|B8CKF4|DNAJ_SHEPW Chaperone protein DnaJ OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=dnaJ PE=3 SV=1
Length = 376
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 40/197 (20%)
Query: 121 DGIGAPKIDKPLQR---HG-GRLEHNETY------CGSCYGAESSDEDCCNNCEEVREAY 170
DG GA K KP HG G+++ + + C +C+G +D CN C
Sbjct: 149 DGSGAKKGSKPTTCGTCHGQGQVQMRQGFFAVQQACPTCHGRGKIIKDPCNKCHGEGRVE 208
Query: 171 RKKGWALSNPDLIDQCKREGFLQRIKEEEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSG 230
+ K ++ P +D R GEG AG F PG + Q
Sbjct: 209 KSKTLSVKIPAGVDTGDRIRL-------SGEG-----------EAGEFGAPPGDLYVQVS 250
Query: 231 VHVHDILAFQRDSFNISHKI----NKLAFGEHFPGVVNPLDG---VRWTQETPSG-MYQY 282
V H I FQRD N+ ++ +K A G V LDG ++ ET +G M++
Sbjct: 251 VREHAI--FQRDGNNLYCEVPISFSKAALGGEIE--VPTLDGKVNLKIPTETQTGRMFRM 306
Query: 283 FIKVVPTVYTDVSGHTI 299
K V +V + G +
Sbjct: 307 RGKGVKSVRSHAVGDLL 323
>sp|Q32PA5|UBE2C_BOVIN Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1
Length = 179
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 20/108 (18%)
Query: 67 ETLRINFDVTFPA------------LPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGN 114
E LR + FP+ PC +VD G LD+ D + D +
Sbjct: 75 EDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQ---GNICLDILKDKWSALYDVR-T 130
Query: 115 VIESRQDGIGAPKIDKPLQRHGGRLEHNET----YCGSCYGAESSDED 158
++ S Q +G P ID PL H L N T Y Y + S +D
Sbjct: 131 ILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQVSSQD 178
>sp|Q9D1C1|UBE2C_MOUSE Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2
SV=1
Length = 179
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 20/108 (18%)
Query: 67 ETLRINFDVTFPA------------LPCSILSVDAMDISGEQHLDVKHDIFKKRLDSQGN 114
E LR + FP+ PC +VD G LD+ D + D +
Sbjct: 75 EDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQ---GNICLDILKDKWSALYDVR-T 130
Query: 115 VIESRQDGIGAPKIDKPLQRHGGRLEHNET----YCGSCYGAESSDED 158
++ S Q +G P ID PL H L N T Y Y + S +D
Sbjct: 131 ILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQVSSQD 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,087,218
Number of Sequences: 539616
Number of extensions: 6472079
Number of successful extensions: 13901
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 13797
Number of HSP's gapped (non-prelim): 54
length of query: 386
length of database: 191,569,459
effective HSP length: 119
effective length of query: 267
effective length of database: 127,355,155
effective search space: 34003826385
effective search space used: 34003826385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)