Query 016587
Match_columns 386
No_of_seqs 110 out of 542
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 16:04:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016587.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016587hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1y29a_ g.3.6.2 (A:) Huwentoxi 58.5 2 0.00015 23.3 1.3 16 148-164 8-23 (28)
2 d1a7ia2 g.39.1.3 (A:36-67) Cys 18.6 5.3 0.00039 22.8 -1.5 11 142-152 19-29 (32)
3 d1sfpa_ b.23.1.1 (A:) Acidic s 14.4 79 0.0058 22.1 4.0 39 53-93 24-62 (111)
4 d1a8la2 c.47.1.2 (A:120-226) P 13.1 44 0.0032 23.3 2.1 16 157-172 24-39 (107)
5 d2pg3a1 c.26.2.1 (A:1-230) Que 13.0 33 0.0024 27.6 1.5 30 145-175 184-215 (230)
6 d1r7ha_ c.47.1.1 (A:) Glutared 12.5 51 0.0037 21.5 2.2 21 158-178 9-29 (74)
7 d1x6aa2 g.39.1.3 (A:42-75) Lim 12.2 11 0.00083 21.8 -1.3 12 140-151 20-31 (34)
8 d1i26a_ g.3.6.3 (A:) PTU-1 {As 12.0 40 0.0029 18.7 1.1 11 148-161 11-21 (34)
9 d1hyua4 c.47.1.2 (A:103-198) A 12.0 51 0.0037 22.9 2.1 17 157-173 24-40 (96)
10 d2b5ea1 c.47.1.2 (A:365-504) P 11.7 42 0.0031 24.9 1.6 17 157-173 39-55 (140)
No 1
>d1y29a_ g.3.6.2 (A:) Huwentoxin-X {Spider (Selenocosmia hainana) [TaxId: 209901]}
Probab=58.50 E-value=2 Score=23.33 Aligned_cols=16 Identities=44% Similarity=1.223 Sum_probs=11.8
Q ss_pred CCcccCCCCCccccchH
Q 016587 148 SCYGAESSDEDCCNNCE 164 (386)
Q Consensus 148 ~Cyga~~~~~~CCntC~ 164 (386)
+||||- .+-+||-.|.
T Consensus 8 pcygat-qkipccgvcs 23 (28)
T d1y29a_ 8 PCYGAT-QKIPCCGVCS 23 (28)
T ss_dssp CCCTTC-CSCCBSSCBS
T ss_pred cccccc-ccccceeeec
Confidence 699985 5678987763
No 2
>d1a7ia2 g.39.1.3 (A:36-67) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=18.62 E-value=5.3 Score=22.75 Aligned_cols=11 Identities=64% Similarity=1.488 Sum_probs=8.8
Q ss_pred CCCccCCCccc
Q 016587 142 NETYCGSCYGA 152 (386)
Q Consensus 142 ~~~~cg~Cyga 152 (386)
.+.||-+|||-
T Consensus 19 ~eiYCKsCygk 29 (32)
T d1a7ia2 19 AEVYCKSCYGK 29 (32)
T ss_dssp TEEECSHHHHH
T ss_pred ceEEehhhccc
Confidence 35799999984
No 3
>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]}
Probab=14.38 E-value=79 Score=22.12 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=29.0
Q ss_pred eeeEEEEEEecCCCceeEEEEEEEeCccCCceeEEeeEecC
Q 016587 53 AVTETKLLVDTSRGETLRINFDVTFPALPCSILSVDAMDIS 93 (386)
Q Consensus 53 ~~~~~~l~VD~~~~~~l~in~dItfp~~pC~~l~vDv~D~~ 93 (386)
+...=...|....+.++.|+|.= | .+.|..=.|.+.|-.
T Consensus 24 ~~~~C~w~I~~p~g~~I~l~f~~-f-~~~c~~d~v~i~dg~ 62 (111)
T d1sfpa_ 24 PKTNCVWTIQMPPEYHVRVSIQY-L-QLNCNKESLEIIDGL 62 (111)
T ss_dssp SCSEEEEEEECCTTCEEEEEEEE-E-ECCTTTEEEEEESSS
T ss_pred CCCcEEEEEEcCCCceeeEEEee-c-ccccceeeeeecCCc
Confidence 45556667777778888888874 5 889998888887743
No 4
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=13.14 E-value=44 Score=23.28 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=10.7
Q ss_pred CccccchHHHHHHHHH
Q 016587 157 EDCCNNCEEVREAYRK 172 (386)
Q Consensus 157 ~~CCntC~~v~~ay~~ 172 (386)
..||..|+.+.+.+.+
T Consensus 24 a~wC~~C~~~~p~~~~ 39 (107)
T d1a8la2 24 TPTCPYCPLAVRMAHK 39 (107)
T ss_dssp CSSCTTHHHHHHHHHH
T ss_pred cCccccchhhChhHHh
Confidence 3577777777766653
No 5
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}
Probab=13.03 E-value=33 Score=27.64 Aligned_cols=30 Identities=17% Similarity=0.440 Sum_probs=21.5
Q ss_pred ccCCCcccCCCCCcc--ccchHHHHHHHHHcCC
Q 016587 145 YCGSCYGAESSDEDC--CNNCEEVREAYRKKGW 175 (386)
Q Consensus 145 ~cg~Cyga~~~~~~C--CntC~~v~~ay~~~~~ 175 (386)
..-|||.... ...| |.+|.+-+.||++.++
T Consensus 184 ~T~SCy~~~~-~~~CG~C~~C~~R~~af~~~~~ 215 (230)
T d2pg3a1 184 HTLTCYNGIK-GDGCGQCAACHLRANGLAQYQK 215 (230)
T ss_dssp HCCCCTTSCC-TTTTSCSHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCC-CCCCCCCHhHHHHHHHHHHhCC
Confidence 3568986542 2346 9999999999987654
No 6
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=12.49 E-value=51 Score=21.52 Aligned_cols=21 Identities=24% Similarity=0.615 Sum_probs=18.0
Q ss_pred ccccchHHHHHHHHHcCCCCC
Q 016587 158 DCCNNCEEVREAYRKKGWALS 178 (386)
Q Consensus 158 ~CCntC~~v~~ay~~~~~~~~ 178 (386)
+.|..|+.+++..++.|..+.
T Consensus 9 ~~C~~C~~ak~~L~~~~i~~~ 29 (74)
T d1r7ha_ 9 PACVQCTATKKALDRAGLAYN 29 (74)
T ss_dssp TTCHHHHHHHHHHHHTTCCCE
T ss_pred CCChhHHHHHHHHHHcCCceE
Confidence 578999999999999987664
No 7
>d1x6aa2 g.39.1.3 (A:42-75) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.17 E-value=11 Score=21.76 Aligned_cols=12 Identities=42% Similarity=1.157 Sum_probs=8.8
Q ss_pred ccCCCccCCCcc
Q 016587 140 EHNETYCGSCYG 151 (386)
Q Consensus 140 ~~~~~~cg~Cyg 151 (386)
+...-|||+||.
T Consensus 20 erskLYCG~Cy~ 31 (34)
T d1x6aa2 20 QHATLYCGKCHN 31 (34)
T ss_dssp SSSCEEEHHHHH
T ss_pred eeceeeeecchh
Confidence 345569999984
No 8
>d1i26a_ g.3.6.3 (A:) PTU-1 {Assassin bug (Peirates turpis) [TaxId: 181095]}
Probab=12.04 E-value=40 Score=18.72 Aligned_cols=11 Identities=45% Similarity=1.639 Sum_probs=7.4
Q ss_pred CCcccCCCCCcccc
Q 016587 148 SCYGAESSDEDCCN 161 (386)
Q Consensus 148 ~Cyga~~~~~~CCn 161 (386)
+|+|.. .+|||
T Consensus 11 pcfgtd---kpccn 21 (34)
T d1i26a_ 11 PCFGTD---KPCCN 21 (34)
T ss_dssp CCTTTT---CCBSS
T ss_pred CccCCC---CCCcC
Confidence 577764 56886
No 9
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=11.99 E-value=51 Score=22.85 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=12.5
Q ss_pred CccccchHHHHHHHHHc
Q 016587 157 EDCCNNCEEVREAYRKK 173 (386)
Q Consensus 157 ~~CCntC~~v~~ay~~~ 173 (386)
..||..|+.+.+++.+.
T Consensus 24 s~~C~~C~~~~p~~~~~ 40 (96)
T d1hyua4 24 SLSCHNCPDVVQALNLM 40 (96)
T ss_dssp CTTCSSHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHH
Confidence 46788888888877643
No 10
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.68 E-value=42 Score=24.87 Aligned_cols=17 Identities=18% Similarity=0.671 Sum_probs=13.2
Q ss_pred CccccchHHHHHHHHHc
Q 016587 157 EDCCNNCEEVREAYRKK 173 (386)
Q Consensus 157 ~~CCntC~~v~~ay~~~ 173 (386)
.+||..|+.+...|.+.
T Consensus 39 a~wC~~C~~~~p~~~~l 55 (140)
T d2b5ea1 39 APWCGHCKRLAPTYQEL 55 (140)
T ss_dssp CTTCHHHHHHHHHHHHH
T ss_pred eccCcccchhHHHHHHH
Confidence 46889999888877753
Done!