Query 016589
Match_columns 386
No_of_seqs 567 out of 2841
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 08:12:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016589.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016589hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02652 hydrolase; alpha/beta 100.0 2E-49 4.3E-54 356.0 38.9 370 2-381 4-389 (395)
2 KOG1455 Lysophospholipase [Lip 100.0 7.4E-39 1.6E-43 262.6 27.6 281 92-379 22-312 (313)
3 PLN02385 hydrolase; alpha/beta 100.0 2.4E-35 5.2E-40 264.8 31.2 277 97-381 61-347 (349)
4 PHA02857 monoglyceride lipase; 100.0 3E-34 6.5E-39 250.2 31.0 268 101-380 4-274 (276)
5 PLN02298 hydrolase, alpha/beta 100.0 7.6E-34 1.6E-38 253.7 31.6 278 97-382 32-320 (330)
6 COG2267 PldB Lysophospholipase 100.0 9.8E-34 2.1E-38 245.2 27.1 281 94-382 6-297 (298)
7 PRK10749 lysophospholipase L2; 100.0 3.6E-32 7.8E-37 242.0 30.5 276 95-379 28-329 (330)
8 TIGR01607 PST-A Plasmodium sub 100.0 7.1E-31 1.5E-35 232.8 26.4 266 102-377 2-331 (332)
9 PLN02824 hydrolase, alpha/beta 100.0 3.7E-31 7.9E-36 232.8 20.7 258 100-379 10-294 (294)
10 KOG4178 Soluble epoxide hydrol 100.0 3.1E-30 6.8E-35 215.6 22.9 268 97-379 21-320 (322)
11 PRK00870 haloalkane dehalogena 100.0 4.1E-30 8.8E-35 226.8 24.2 254 108-379 34-301 (302)
12 TIGR02240 PHA_depoly_arom poly 100.0 7.1E-30 1.5E-34 222.4 23.1 259 101-381 5-268 (276)
13 PRK03592 haloalkane dehalogena 100.0 2.8E-29 6E-34 220.9 26.2 258 102-380 11-290 (295)
14 PLN02679 hydrolase, alpha/beta 100.0 1.6E-29 3.4E-34 227.3 21.3 258 104-379 67-357 (360)
15 PLN02965 Probable pheophorbida 100.0 1.4E-29 3.1E-34 217.8 20.1 237 125-379 5-253 (255)
16 PLN03087 BODYGUARD 1 domain co 100.0 2.9E-29 6.2E-34 228.4 22.7 262 101-378 179-478 (481)
17 PRK10673 acyl-CoA esterase; Pr 100.0 2.9E-29 6.4E-34 216.3 20.6 249 109-378 2-254 (255)
18 TIGR03056 bchO_mg_che_rel puta 100.0 5.9E-29 1.3E-33 217.3 22.3 263 94-377 2-278 (278)
19 TIGR03611 RutD pyrimidine util 100.0 8.1E-29 1.8E-33 213.7 20.5 251 110-377 1-256 (257)
20 COG1647 Esterase/lipase [Gener 100.0 3.5E-28 7.5E-33 190.0 20.5 229 123-378 15-243 (243)
21 PRK03204 haloalkane dehalogena 100.0 8.4E-28 1.8E-32 209.7 23.6 255 101-377 17-286 (286)
22 PLN03084 alpha/beta hydrolase 100.0 2.7E-27 5.9E-32 211.6 25.1 258 100-378 107-383 (383)
23 TIGR03343 biphenyl_bphD 2-hydr 100.0 3.7E-28 8.1E-33 212.6 18.9 247 107-377 19-281 (282)
24 PRK06489 hypothetical protein; 100.0 4.8E-27 1E-31 211.7 23.6 257 105-380 47-358 (360)
25 PLN02578 hydrolase 100.0 4.5E-27 9.8E-32 211.2 22.3 253 101-377 69-353 (354)
26 PRK13604 luxD acyl transferase 100.0 9.1E-27 2E-31 197.6 21.8 231 97-361 9-247 (307)
27 PRK10349 carboxylesterase BioH 100.0 2.8E-27 6.2E-32 203.9 19.2 242 110-377 4-254 (256)
28 TIGR02427 protocat_pcaD 3-oxoa 100.0 6.8E-28 1.5E-32 206.9 15.3 246 110-377 2-251 (251)
29 PRK07581 hypothetical protein; 100.0 3.9E-27 8.6E-32 211.1 19.5 261 105-381 23-338 (339)
30 TIGR01738 bioH putative pimelo 99.9 1.6E-26 3.4E-31 197.7 18.4 229 123-376 4-245 (245)
31 PRK11126 2-succinyl-6-hydroxy- 99.9 5.7E-27 1.2E-31 200.4 15.4 228 123-378 2-241 (242)
32 TIGR01250 pro_imino_pep_2 prol 99.9 3.5E-26 7.6E-31 200.5 20.5 254 102-377 6-288 (288)
33 PLN02211 methyl indole-3-aceta 99.9 3E-26 6.5E-31 198.0 19.1 249 105-378 4-269 (273)
34 TIGR01392 homoserO_Ac_trn homo 99.9 6.9E-26 1.5E-30 203.6 21.8 258 104-377 12-351 (351)
35 KOG4409 Predicted hydrolase/ac 99.9 4.4E-26 9.5E-31 191.2 18.9 258 105-378 73-363 (365)
36 PLN02894 hydrolase, alpha/beta 99.9 5.3E-25 1.1E-29 200.0 26.3 268 101-385 83-391 (402)
37 PRK08775 homoserine O-acetyltr 99.9 2.4E-26 5.1E-31 206.0 17.1 259 103-380 41-340 (343)
38 PRK00175 metX homoserine O-ace 99.9 1.5E-25 3.2E-30 202.9 22.2 264 105-380 30-375 (379)
39 PF12697 Abhydrolase_6: Alpha/ 99.9 6.3E-27 1.4E-31 197.7 10.3 220 126-370 1-227 (228)
40 PLN02511 hydrolase 99.9 4.2E-26 9.2E-31 206.4 15.0 268 98-380 72-366 (388)
41 KOG1454 Predicted hydrolase/ac 99.9 2.2E-25 4.8E-30 195.0 18.1 246 121-380 56-325 (326)
42 TIGR03695 menH_SHCHC 2-succiny 99.9 3.4E-25 7.3E-30 189.9 18.9 238 123-377 1-251 (251)
43 PRK05077 frsA fermentation/res 99.9 2.8E-24 6E-29 195.2 24.8 240 97-380 168-413 (414)
44 TIGR03100 hydr1_PEP hydrolase, 99.9 8.3E-24 1.8E-28 183.1 24.7 251 104-377 8-273 (274)
45 TIGR01249 pro_imino_pep_1 prol 99.9 1.5E-24 3.3E-29 191.3 19.8 259 99-378 6-304 (306)
46 PRK10985 putative hydrolase; P 99.9 3.8E-24 8.2E-29 189.9 21.4 271 99-381 33-322 (324)
47 PRK14875 acetoin dehydrogenase 99.9 9E-24 2E-28 192.3 21.7 243 103-378 114-370 (371)
48 PRK05855 short chain dehydroge 99.9 2E-23 4.3E-28 201.5 20.3 264 100-380 5-293 (582)
49 PLN02980 2-oxoglutarate decarb 99.9 2E-23 4.3E-28 217.3 21.2 245 122-384 1370-1644(1655)
50 PRK10566 esterase; Provisional 99.9 3.7E-22 8.1E-27 171.2 24.1 209 121-380 25-249 (249)
51 PLN02872 triacylglycerol lipas 99.9 3.9E-23 8.4E-28 185.3 16.9 278 96-383 43-393 (395)
52 TIGR01836 PHA_synth_III_C poly 99.9 2.7E-22 5.8E-27 180.2 21.6 260 102-379 42-350 (350)
53 KOG4391 Predicted alpha/beta h 99.9 2.1E-23 4.6E-28 162.1 12.4 231 97-385 54-288 (300)
54 KOG2382 Predicted alpha/beta h 99.9 4.8E-22 1E-26 166.8 17.7 254 109-379 37-313 (315)
55 PRK06765 homoserine O-acetyltr 99.9 1.5E-21 3.2E-26 175.2 22.2 260 106-378 39-387 (389)
56 KOG1552 Predicted alpha/beta h 99.9 1.9E-21 4.1E-26 157.3 18.6 218 97-381 35-254 (258)
57 COG1506 DAP2 Dipeptidyl aminop 99.9 4.2E-21 9.2E-26 183.6 19.7 248 92-382 360-619 (620)
58 PF12695 Abhydrolase_5: Alpha/ 99.9 1.1E-20 2.3E-25 148.2 15.9 144 125-358 1-145 (145)
59 KOG2984 Predicted hydrolase [G 99.9 2.6E-21 5.6E-26 148.8 10.6 244 103-379 26-276 (277)
60 KOG1838 Alpha/beta hydrolase [ 99.9 1E-19 2.2E-24 158.2 20.8 276 92-379 88-388 (409)
61 PRK11071 esterase YqiA; Provis 99.9 8.7E-20 1.9E-24 148.3 19.1 183 124-377 2-189 (190)
62 COG0429 Predicted hydrolase of 99.8 1.3E-19 2.9E-24 151.6 18.9 274 100-381 52-342 (345)
63 PF01738 DLH: Dienelactone hyd 99.8 6.7E-20 1.4E-24 153.6 16.6 195 112-380 3-218 (218)
64 KOG4667 Predicted esterase [Li 99.8 4E-19 8.7E-24 138.3 17.8 248 97-384 10-263 (269)
65 PRK11460 putative hydrolase; P 99.8 5.8E-19 1.3E-23 148.5 20.5 180 120-380 13-209 (232)
66 PF00326 Peptidase_S9: Prolyl 99.8 4.4E-20 9.5E-25 154.3 13.1 201 139-382 3-212 (213)
67 TIGR03101 hydr2_PEP hydrolase, 99.8 1.9E-19 4E-24 152.6 16.9 128 103-239 5-136 (266)
68 TIGR01838 PHA_synth_I poly(R)- 99.8 1.3E-19 2.8E-24 167.0 17.0 244 110-362 174-459 (532)
69 PF05448 AXE1: Acetyl xylan es 99.8 1.1E-18 2.5E-23 152.1 19.8 243 93-379 52-320 (320)
70 PRK07868 acyl-CoA synthetase; 99.8 6.6E-19 1.4E-23 177.9 20.0 244 122-382 66-364 (994)
71 TIGR02821 fghA_ester_D S-formy 99.8 3.7E-18 7.9E-23 147.9 21.8 226 102-379 19-274 (275)
72 PLN02442 S-formylglutathione h 99.8 8.7E-18 1.9E-22 145.8 23.1 210 104-360 26-264 (283)
73 PLN00021 chlorophyllase 99.8 3E-18 6.5E-23 149.3 20.1 206 108-382 37-286 (313)
74 COG0412 Dienelactone hydrolase 99.8 1.3E-17 2.9E-22 139.5 22.9 206 100-381 5-235 (236)
75 COG2945 Predicted hydrolase of 99.8 4.2E-18 9.2E-23 130.8 15.9 176 119-377 24-205 (210)
76 PF00561 Abhydrolase_1: alpha/ 99.8 4.4E-20 9.5E-25 156.4 4.7 209 151-373 1-229 (230)
77 KOG2564 Predicted acetyltransf 99.8 9.6E-18 2.1E-22 136.0 13.3 243 121-380 72-328 (343)
78 TIGR01840 esterase_phb esteras 99.8 3.3E-17 7.2E-22 136.5 16.7 118 113-237 2-130 (212)
79 PRK10162 acetyl esterase; Prov 99.8 4.7E-16 1E-20 137.4 24.0 239 97-381 57-317 (318)
80 COG0596 MhpC Predicted hydrola 99.8 6.7E-17 1.4E-21 139.5 18.4 250 107-377 9-280 (282)
81 TIGR00976 /NonD putative hydro 99.8 4.1E-17 8.8E-22 154.9 17.5 129 103-240 2-135 (550)
82 PF02230 Abhydrolase_2: Phosph 99.7 2.7E-16 5.8E-21 131.3 16.8 185 119-380 10-216 (216)
83 PF06342 DUF1057: Alpha/beta h 99.7 2.2E-15 4.8E-20 123.9 20.7 127 99-237 8-137 (297)
84 COG2021 MET2 Homoserine acetyl 99.7 7.3E-16 1.6E-20 131.6 18.2 261 106-378 34-367 (368)
85 COG4757 Predicted alpha/beta h 99.7 9.8E-16 2.1E-20 121.1 17.5 257 100-376 8-280 (281)
86 COG3458 Acetyl esterase (deace 99.7 9.3E-16 2E-20 124.2 17.8 268 67-380 21-318 (321)
87 PRK10115 protease 2; Provision 99.7 3E-15 6.5E-20 144.4 22.2 244 96-381 415-677 (686)
88 PF06500 DUF1100: Alpha/beta h 99.7 1.9E-16 4.2E-21 139.0 12.0 236 98-380 166-410 (411)
89 COG3208 GrsT Predicted thioest 99.7 3.8E-15 8.3E-20 120.1 18.2 221 121-378 5-235 (244)
90 PF12146 Hydrolase_4: Putative 99.7 2.6E-16 5.6E-21 107.0 9.3 79 107-186 1-79 (79)
91 TIGR01839 PHA_synth_II poly(R) 99.7 4.5E-15 9.8E-20 135.5 18.3 238 112-358 203-481 (560)
92 TIGR01849 PHB_depoly_PhaZ poly 99.7 8.4E-15 1.8E-19 130.1 17.6 247 123-379 102-406 (406)
93 KOG2624 Triglyceride lipase-ch 99.7 4.2E-15 9E-20 131.7 15.5 280 96-380 47-399 (403)
94 KOG3043 Predicted hydrolase re 99.6 1.3E-14 2.9E-19 114.5 16.5 180 124-380 40-241 (242)
95 PF03096 Ndr: Ndr family; Int 99.6 1.9E-14 4.1E-19 120.1 18.4 256 102-378 4-278 (283)
96 PF02273 Acyl_transf_2: Acyl t 99.6 3.4E-14 7.3E-19 113.5 17.8 227 100-361 5-240 (294)
97 PF08538 DUF1749: Protein of u 99.6 2.4E-14 5.1E-19 120.8 16.9 238 122-377 32-303 (303)
98 PF02129 Peptidase_S15: X-Pro 99.6 4.1E-15 8.9E-20 128.8 10.6 127 106-241 1-140 (272)
99 COG0400 Predicted esterase [Ge 99.6 5.5E-14 1.2E-18 113.9 15.6 179 121-380 16-206 (207)
100 PF10230 DUF2305: Uncharacteri 99.6 8.6E-14 1.9E-18 119.1 16.8 232 123-359 2-265 (266)
101 PF12740 Chlorophyllase2: Chlo 99.6 2.3E-13 5E-18 112.8 18.0 116 112-239 6-133 (259)
102 KOG2931 Differentiation-relate 99.6 5E-13 1.1E-17 109.9 17.5 262 97-378 22-305 (326)
103 PF05728 UPF0227: Uncharacteri 99.5 8E-13 1.7E-17 105.8 17.2 181 126-376 2-186 (187)
104 PF07859 Abhydrolase_3: alpha/ 99.5 9.4E-14 2E-18 115.9 12.2 102 126-239 1-112 (211)
105 PF06821 Ser_hydrolase: Serine 99.5 1.5E-13 3.3E-18 108.9 12.3 151 126-361 1-156 (171)
106 COG0657 Aes Esterase/lipase [L 99.5 5.5E-12 1.2E-16 111.7 23.1 232 103-377 57-308 (312)
107 TIGR03230 lipo_lipase lipoprot 99.5 2.3E-13 5E-18 122.3 13.4 108 122-237 40-154 (442)
108 KOG1515 Arylacetamide deacetyl 99.5 1.8E-11 3.9E-16 106.5 24.3 241 100-379 64-335 (336)
109 PRK05371 x-prolyl-dipeptidyl a 99.5 2.1E-12 4.6E-17 125.6 18.8 223 141-381 270-521 (767)
110 cd00707 Pancreat_lipase_like P 99.5 1.8E-13 4E-18 117.8 9.3 110 122-239 35-149 (275)
111 TIGR03502 lipase_Pla1_cef extr 99.5 5.4E-13 1.2E-17 127.3 13.1 117 99-219 419-575 (792)
112 PF12715 Abhydrolase_7: Abhydr 99.5 1.9E-13 4.2E-18 118.1 9.2 134 95-236 86-259 (390)
113 PF00975 Thioesterase: Thioest 99.5 2.5E-12 5.4E-17 108.8 16.0 104 124-237 1-104 (229)
114 KOG2100 Dipeptidyl aminopeptid 99.4 4.6E-12 9.9E-17 122.9 17.5 229 106-384 506-752 (755)
115 COG3571 Predicted hydrolase of 99.4 1.1E-11 2.5E-16 92.3 15.4 181 123-378 14-210 (213)
116 PF09752 DUF2048: Uncharacteri 99.4 4.3E-11 9.4E-16 102.7 19.1 247 111-377 78-347 (348)
117 PF06057 VirJ: Bacterial virul 99.4 8E-12 1.7E-16 97.8 13.2 187 124-378 3-191 (192)
118 PF07224 Chlorophyllase: Chlor 99.4 1.2E-11 2.5E-16 100.4 13.8 118 110-240 33-160 (307)
119 PF10503 Esterase_phd: Esteras 99.4 1.8E-11 4E-16 100.4 15.3 121 110-237 1-132 (220)
120 COG3243 PhaC Poly(3-hydroxyalk 99.4 2.8E-11 6E-16 105.2 15.1 235 115-361 98-373 (445)
121 PF03403 PAF-AH_p_II: Platelet 99.4 1.9E-11 4.2E-16 109.5 14.4 186 121-383 98-362 (379)
122 KOG2281 Dipeptidyl aminopeptid 99.4 1.1E-10 2.3E-15 105.8 18.9 234 97-378 613-866 (867)
123 COG4188 Predicted dienelactone 99.3 2.7E-11 5.8E-16 104.3 13.3 224 107-362 49-298 (365)
124 KOG2565 Predicted hydrolases o 99.3 1.1E-10 2.4E-15 99.1 16.6 120 103-233 129-260 (469)
125 KOG4627 Kynurenine formamidase 99.3 3.1E-11 6.8E-16 94.0 11.9 193 109-362 55-251 (270)
126 KOG2551 Phospholipase/carboxyh 99.3 1.9E-10 4.1E-15 91.3 15.6 185 122-382 4-223 (230)
127 COG4099 Predicted peptidase [G 99.3 3.8E-11 8.3E-16 98.9 11.4 159 104-344 168-343 (387)
128 PF03583 LIP: Secretory lipase 99.3 2.5E-10 5.5E-15 99.0 16.9 229 141-384 17-286 (290)
129 COG2936 Predicted acyl esteras 99.3 1.1E-10 2.5E-15 106.6 14.7 136 96-240 18-162 (563)
130 PF08840 BAAT_C: BAAT / Acyl-C 99.3 6.2E-11 1.3E-15 98.1 11.2 171 179-381 4-212 (213)
131 PF03959 FSH1: Serine hydrolas 99.2 1.5E-10 3.2E-15 96.1 12.0 174 122-362 3-205 (212)
132 KOG3975 Uncharacterized conser 99.2 4.1E-10 8.9E-15 90.6 13.6 265 102-376 5-300 (301)
133 PTZ00472 serine carboxypeptida 99.2 8.1E-09 1.7E-13 95.4 23.9 133 107-240 60-219 (462)
134 PF06028 DUF915: Alpha/beta hy 99.2 1.2E-09 2.7E-14 91.8 16.5 211 122-377 10-253 (255)
135 PRK04940 hypothetical protein; 99.2 6.3E-09 1.4E-13 81.6 18.2 174 126-377 2-178 (180)
136 PF07819 PGAP1: PGAP1-like pro 99.2 4.9E-10 1.1E-14 93.3 12.7 109 123-239 4-125 (225)
137 COG3545 Predicted esterase of 99.2 3.8E-09 8.2E-14 81.0 15.6 172 124-378 3-178 (181)
138 KOG2112 Lysophospholipase [Lip 99.1 4.3E-09 9.2E-14 83.2 13.1 181 123-378 3-203 (206)
139 PRK10252 entF enterobactin syn 99.1 3.9E-09 8.5E-14 111.6 17.3 103 123-236 1068-1170(1296)
140 PF05677 DUF818: Chlamydia CHL 99.1 1.2E-07 2.7E-12 80.8 22.1 103 105-211 119-231 (365)
141 KOG3847 Phospholipase A2 (plat 99.0 1.9E-09 4.2E-14 89.6 10.7 111 120-238 115-276 (399)
142 COG3509 LpqC Poly(3-hydroxybut 99.0 2.6E-09 5.6E-14 88.8 11.3 126 104-237 41-179 (312)
143 PF12048 DUF3530: Protein of u 99.0 4.9E-07 1.1E-11 79.1 24.7 196 112-379 75-309 (310)
144 KOG3101 Esterase D [General fu 99.0 9.3E-09 2E-13 80.7 11.6 127 107-240 25-179 (283)
145 COG3319 Thioesterase domains o 99.0 5.6E-08 1.2E-12 81.6 16.2 104 124-238 1-104 (257)
146 PF05990 DUF900: Alpha/beta hy 98.9 9.4E-09 2E-13 86.2 10.9 118 122-239 17-139 (233)
147 PRK10439 enterobactin/ferric e 98.9 3.7E-07 8.1E-12 83.1 20.7 121 107-237 191-323 (411)
148 PLN02733 phosphatidylcholine-s 98.9 1.7E-08 3.7E-13 91.8 10.2 99 134-240 105-204 (440)
149 PF11339 DUF3141: Protein of u 98.8 1.6E-07 3.5E-12 84.1 15.6 87 141-241 92-179 (581)
150 PF01674 Lipase_2: Lipase (cla 98.8 2.4E-09 5.2E-14 87.8 3.7 86 124-211 2-91 (219)
151 COG1505 Serine proteases of th 98.8 1.1E-07 2.3E-12 86.5 13.9 240 96-380 393-647 (648)
152 smart00824 PKS_TE Thioesterase 98.8 1.3E-07 2.8E-12 78.6 13.3 98 128-236 2-101 (212)
153 PF10340 DUF2424: Protein of u 98.8 8.2E-07 1.8E-11 78.0 17.8 112 121-240 120-238 (374)
154 KOG3253 Predicted alpha/beta h 98.8 2.5E-07 5.5E-12 83.9 14.1 183 121-379 174-374 (784)
155 KOG1553 Predicted alpha/beta h 98.7 2.8E-08 6.1E-13 83.9 7.1 128 99-239 216-347 (517)
156 COG4814 Uncharacterized protei 98.7 1.3E-06 2.8E-11 71.1 15.3 208 124-378 46-286 (288)
157 KOG4840 Predicted hydrolases o 98.7 1E-06 2.3E-11 70.0 13.1 105 123-240 36-147 (299)
158 COG1073 Hydrolases of the alph 98.6 1E-06 2.2E-11 77.5 14.0 246 108-380 31-298 (299)
159 PF00151 Lipase: Lipase; Inte 98.6 3.8E-08 8.2E-13 86.6 4.5 110 121-239 69-189 (331)
160 COG4782 Uncharacterized protei 98.6 4.4E-07 9.5E-12 78.0 10.3 120 121-240 114-237 (377)
161 PF00450 Peptidase_S10: Serine 98.6 4.5E-06 9.8E-11 77.3 17.9 141 99-240 13-184 (415)
162 PF00756 Esterase: Putative es 98.6 2E-07 4.3E-12 80.0 8.0 127 107-240 5-153 (251)
163 COG1770 PtrB Protease II [Amin 98.5 6.6E-06 1.4E-10 76.2 16.5 223 100-362 422-660 (682)
164 COG2272 PnbA Carboxylesterase 98.5 3.4E-07 7.3E-12 82.1 8.0 125 109-238 79-218 (491)
165 PF05057 DUF676: Putative seri 98.5 4.1E-06 9E-11 69.7 14.0 87 123-211 4-94 (217)
166 PF05705 DUF829: Eukaryotic pr 98.5 4.7E-06 1E-10 70.8 13.4 64 313-376 175-240 (240)
167 cd00312 Esterase_lipase Estera 98.5 7E-07 1.5E-11 84.6 9.2 120 109-238 78-214 (493)
168 PLN02606 palmitoyl-protein thi 98.5 2.1E-05 4.5E-10 67.0 16.7 102 125-237 28-132 (306)
169 COG3946 VirJ Type IV secretory 98.4 1.1E-05 2.4E-10 70.3 15.1 84 122-211 259-342 (456)
170 COG3150 Predicted esterase [Ge 98.4 2.1E-05 4.5E-10 59.9 14.1 90 126-239 2-93 (191)
171 KOG2237 Predicted serine prote 98.4 6.6E-06 1.4E-10 75.7 12.8 247 96-384 440-710 (712)
172 PLN02209 serine carboxypeptida 98.3 0.00074 1.6E-08 62.1 23.8 135 106-240 50-215 (437)
173 COG0627 Predicted esterase [Ge 98.3 3.2E-05 6.9E-10 67.4 13.9 233 121-382 52-314 (316)
174 PF11144 DUF2920: Protein of u 98.3 0.0006 1.3E-08 60.6 21.7 126 106-238 18-220 (403)
175 PF05577 Peptidase_S28: Serine 98.2 2.3E-05 4.9E-10 72.9 13.7 110 123-239 29-150 (434)
176 KOG1282 Serine carboxypeptidas 98.2 0.001 2.2E-08 60.8 22.6 134 106-240 55-216 (454)
177 PLN02633 palmitoyl protein thi 98.2 2E-05 4.2E-10 67.2 10.7 103 124-237 26-131 (314)
178 PLN03016 sinapoylglucose-malat 98.2 0.00042 9.2E-09 63.7 19.5 134 107-240 49-213 (433)
179 PF10142 PhoPQ_related: PhoPQ- 98.1 0.0008 1.7E-08 59.8 20.2 65 312-381 258-322 (367)
180 PF00135 COesterase: Carboxyle 98.1 9.7E-06 2.1E-10 77.8 8.8 122 109-237 108-245 (535)
181 COG1075 LipA Predicted acetylt 98.1 1.1E-05 2.3E-10 71.8 8.0 104 124-239 60-166 (336)
182 KOG1551 Uncharacterized conser 98.0 0.00011 2.4E-09 60.4 11.1 247 110-381 102-368 (371)
183 COG2382 Fes Enterochelin ester 98.0 0.00036 7.8E-09 59.1 14.2 109 121-240 96-215 (299)
184 KOG3724 Negative regulator of 98.0 4.4E-05 9.5E-10 72.0 9.3 105 123-236 89-219 (973)
185 PF02450 LCAT: Lecithin:choles 97.9 0.00011 2.3E-09 67.0 10.8 88 138-239 66-162 (389)
186 PF07082 DUF1350: Protein of u 97.9 0.0027 5.8E-08 52.6 17.6 101 121-234 15-122 (250)
187 COG4553 DepA Poly-beta-hydroxy 97.8 0.0016 3.4E-08 54.6 14.2 124 111-244 91-216 (415)
188 PF08386 Abhydrolase_4: TAP-li 97.7 0.00011 2.4E-09 53.0 6.3 60 316-378 34-93 (103)
189 PF04301 DUF452: Protein of un 97.7 0.00072 1.6E-08 55.1 11.4 78 123-236 11-89 (213)
190 PF02089 Palm_thioest: Palmito 97.5 0.00014 3.1E-09 61.5 5.3 105 124-237 6-116 (279)
191 KOG2183 Prolylcarboxypeptidase 97.5 0.0011 2.3E-08 58.4 10.3 108 124-239 81-205 (492)
192 KOG2541 Palmitoyl protein thio 97.3 0.0027 5.8E-08 52.7 9.9 102 124-237 24-128 (296)
193 KOG3967 Uncharacterized conser 97.3 0.0045 9.8E-08 49.4 10.3 108 121-236 99-226 (297)
194 KOG2182 Hydrolytic enzymes of 97.3 0.0034 7.4E-08 56.9 10.7 110 122-238 85-208 (514)
195 COG2819 Predicted hydrolase of 97.2 0.014 3E-07 49.0 13.2 39 194-239 136-174 (264)
196 cd00741 Lipase Lipase. Lipase 97.2 0.002 4.2E-08 50.5 7.8 60 174-237 7-67 (153)
197 PF01083 Cutinase: Cutinase; 97.2 0.0016 3.5E-08 52.2 7.1 107 125-238 7-123 (179)
198 PLN02517 phosphatidylcholine-s 97.2 0.0012 2.6E-08 61.4 7.0 94 138-237 157-263 (642)
199 PF01764 Lipase_3: Lipase (cla 97.2 0.0023 4.9E-08 49.3 7.7 62 176-237 45-106 (140)
200 KOG2521 Uncharacterized conser 97.1 0.022 4.8E-07 50.2 14.2 69 313-381 222-292 (350)
201 cd00519 Lipase_3 Lipase (class 97.1 0.0041 9E-08 52.4 9.3 63 173-237 106-168 (229)
202 PF11288 DUF3089: Protein of u 97.0 0.0029 6.3E-08 51.3 7.4 69 142-211 38-111 (207)
203 PF04083 Abhydro_lipase: Parti 96.9 0.0023 5.1E-08 41.0 4.9 44 96-139 11-59 (63)
204 PF06259 Abhydrolase_8: Alpha/ 96.9 0.065 1.4E-06 42.7 13.7 107 122-236 18-143 (177)
205 KOG4388 Hormone-sensitive lipa 96.9 0.0055 1.2E-07 56.4 8.2 116 111-237 384-508 (880)
206 KOG1516 Carboxylesterase and r 96.7 0.0028 6E-08 61.0 5.8 118 109-236 96-231 (545)
207 KOG2369 Lecithin:cholesterol a 96.6 0.0068 1.5E-07 54.7 7.1 76 137-222 124-205 (473)
208 COG4947 Uncharacterized protei 96.5 0.013 2.8E-07 45.2 6.7 59 174-239 80-138 (227)
209 COG2939 Carboxypeptidase C (ca 96.2 0.025 5.5E-07 51.7 8.0 94 117-211 95-214 (498)
210 PF11187 DUF2974: Protein of u 96.0 0.021 4.5E-07 47.6 6.2 53 179-236 69-122 (224)
211 PLN02454 triacylglycerol lipas 95.8 0.024 5.2E-07 51.1 6.0 36 176-211 207-244 (414)
212 KOG1202 Animal-type fatty acid 95.6 0.26 5.7E-06 49.9 12.7 99 121-237 2121-2219(2376)
213 KOG1283 Serine carboxypeptidas 95.5 0.27 5.8E-06 42.4 10.9 135 104-240 10-169 (414)
214 PF06441 EHN: Epoxide hydrolas 95.5 0.04 8.6E-07 40.2 5.2 42 100-142 70-111 (112)
215 PF05576 Peptidase_S37: PS-10 95.4 0.055 1.2E-06 48.3 6.9 105 121-236 61-169 (448)
216 PF06850 PHB_depo_C: PHB de-po 95.2 0.037 8.1E-07 44.0 4.8 64 316-379 134-202 (202)
217 PLN02310 triacylglycerol lipas 95.2 0.054 1.2E-06 48.8 6.4 17 195-211 209-225 (405)
218 PF07519 Tannase: Tannase and 95.2 0.26 5.5E-06 46.3 11.1 121 108-239 15-152 (474)
219 PLN03037 lipase class 3 family 95.0 0.067 1.5E-06 49.5 6.3 44 179-222 302-345 (525)
220 PLN02571 triacylglycerol lipas 94.7 0.11 2.4E-06 47.0 6.9 35 177-211 206-242 (413)
221 PLN02408 phospholipase A1 94.6 0.13 2.9E-06 45.8 7.2 41 177-217 180-222 (365)
222 PLN02213 sinapoylglucose-malat 94.6 0.32 7E-06 43.2 9.7 90 151-240 2-99 (319)
223 PLN00413 triacylglycerol lipas 94.4 0.067 1.4E-06 49.0 4.9 32 180-211 269-300 (479)
224 PLN02162 triacylglycerol lipas 94.2 0.076 1.7E-06 48.5 4.8 33 179-211 262-294 (475)
225 PLN02934 triacylglycerol lipas 94.0 0.094 2E-06 48.4 5.1 33 179-211 305-337 (515)
226 KOG4540 Putative lipase essent 93.4 0.17 3.7E-06 42.7 5.1 51 177-236 258-308 (425)
227 COG5153 CVT17 Putative lipase 93.4 0.17 3.7E-06 42.7 5.1 51 177-236 258-308 (425)
228 PLN02847 triacylglycerol lipas 93.3 0.16 3.5E-06 47.8 5.4 36 177-212 233-268 (633)
229 PLN02802 triacylglycerol lipas 93.2 0.29 6.2E-06 45.4 6.7 35 179-213 312-348 (509)
230 PLN02324 triacylglycerol lipas 93.0 0.21 4.5E-06 45.2 5.4 36 176-211 194-231 (415)
231 COG4287 PqaA PhoPQ-activated p 92.3 0.2 4.3E-06 44.0 4.1 61 312-377 325-385 (507)
232 PF08237 PE-PPE: PE-PPE domain 92.3 1.5 3.2E-05 36.6 9.3 60 150-211 2-64 (225)
233 KOG4569 Predicted lipase [Lipi 92.1 0.48 1.1E-05 42.3 6.6 43 179-221 155-197 (336)
234 TIGR03712 acc_sec_asp2 accesso 91.8 11 0.00023 35.1 17.7 120 101-238 269-391 (511)
235 PLN02719 triacylglycerol lipas 91.8 0.3 6.6E-06 45.2 5.0 35 177-211 275-314 (518)
236 PLN02753 triacylglycerol lipas 91.6 0.35 7.6E-06 45.0 5.2 35 177-211 289-328 (531)
237 PLN02761 lipase class 3 family 91.4 0.37 8E-06 44.8 5.1 35 177-211 270-310 (527)
238 COG2830 Uncharacterized protei 88.4 0.73 1.6E-05 35.4 3.8 76 124-235 12-88 (214)
239 KOG4372 Predicted alpha/beta h 88.3 0.81 1.8E-05 41.0 4.6 86 121-211 78-166 (405)
240 PLN02213 sinapoylglucose-malat 88.0 1.6 3.5E-05 38.7 6.5 61 316-378 233-316 (319)
241 PF07519 Tannase: Tannase and 87.6 0.94 2E-05 42.6 4.9 65 315-379 352-427 (474)
242 PF05277 DUF726: Protein of un 86.4 1.9 4.2E-05 38.4 5.9 45 193-239 218-262 (345)
243 COG3673 Uncharacterized conser 86.2 9.1 0.0002 33.4 9.4 91 121-211 29-138 (423)
244 KOG2029 Uncharacterized conser 84.4 2.6 5.7E-05 39.8 5.9 59 178-236 507-571 (697)
245 COG0529 CysC Adenylylsulfate k 82.4 16 0.00035 29.1 8.6 61 121-184 20-84 (197)
246 PF03283 PAE: Pectinacetyleste 81.6 4.5 9.8E-05 36.6 6.3 44 179-222 138-183 (361)
247 PF09949 DUF2183: Uncharacteri 81.2 12 0.00026 26.7 7.1 87 137-232 11-97 (100)
248 PF09994 DUF2235: Uncharacteri 79.0 15 0.00033 31.8 8.6 88 124-211 2-108 (277)
249 cd03818 GT1_ExpC_like This fam 78.0 20 0.00044 32.9 9.7 38 126-165 2-39 (396)
250 PF10081 Abhydrolase_9: Alpha/ 77.1 28 0.00061 30.0 9.1 40 196-239 110-149 (289)
251 KOG4389 Acetylcholinesterase/B 72.7 23 0.0005 33.1 8.0 116 110-237 121-255 (601)
252 PF06309 Torsin: Torsin; Inte 71.6 35 0.00077 25.5 7.5 61 121-191 50-119 (127)
253 PF06792 UPF0261: Uncharacteri 68.8 80 0.0017 29.0 10.5 95 124-222 2-118 (403)
254 PF05576 Peptidase_S37: PS-10 67.2 10 0.00022 34.5 4.5 66 308-377 343-412 (448)
255 PRK12467 peptide synthase; Pro 66.7 37 0.00081 41.6 10.3 82 123-211 3692-3773(3956)
256 PF14606 Lipase_GDSL_3: GDSL-l 60.7 15 0.00032 29.4 4.0 29 173-201 72-100 (178)
257 COG4822 CbiK Cobalamin biosynt 60.0 59 0.0013 26.7 7.1 45 117-161 132-178 (265)
258 PRK02399 hypothetical protein; 56.5 1.6E+02 0.0036 27.0 11.1 102 124-232 4-127 (406)
259 PF05724 TPMT: Thiopurine S-me 53.5 15 0.00033 30.5 3.2 29 125-158 39-67 (218)
260 PRK13256 thiopurine S-methyltr 53.3 15 0.00032 30.7 3.1 28 126-158 46-73 (226)
261 COG3727 Vsr DNA G:T-mismatch r 52.5 35 0.00075 25.5 4.4 35 122-156 56-114 (150)
262 cd01714 ETF_beta The electron 52.4 59 0.0013 26.7 6.5 63 142-221 68-135 (202)
263 PF00326 Peptidase_S9: Prolyl 52.0 59 0.0013 26.6 6.6 42 122-163 143-187 (213)
264 PF01583 APS_kinase: Adenylyls 51.0 30 0.00065 27.0 4.3 36 123-158 1-38 (156)
265 KOG1752 Glutaredoxin and relat 47.6 78 0.0017 22.7 5.6 73 122-211 13-85 (104)
266 PF02230 Abhydrolase_2: Phosph 47.2 49 0.0011 27.3 5.4 57 123-187 155-214 (216)
267 TIGR02873 spore_ylxY probable 47.1 26 0.00056 30.3 3.7 34 124-157 231-264 (268)
268 TIGR02764 spore_ybaN_pdaB poly 45.9 20 0.00043 29.0 2.8 34 124-157 152-188 (191)
269 TIGR02069 cyanophycinase cyano 44.9 1.7E+02 0.0036 25.0 8.2 39 121-159 26-66 (250)
270 KOG2385 Uncharacterized conser 43.9 84 0.0018 29.7 6.4 46 193-240 445-490 (633)
271 COG3340 PepE Peptidase E [Amin 43.8 1E+02 0.0022 25.5 6.2 36 123-158 32-70 (224)
272 COG1073 Hydrolases of the alph 42.2 1.5 3.2E-05 38.1 -4.8 88 123-211 88-176 (299)
273 TIGR01626 ytfJ_HI0045 conserve 41.9 1.5E+02 0.0032 24.0 7.0 53 106-158 43-102 (184)
274 TIGR02884 spore_pdaA delta-lac 41.8 34 0.00073 28.6 3.6 34 124-157 187-221 (224)
275 KOG2872 Uroporphyrinogen decar 41.7 28 0.00062 29.9 3.0 31 122-159 251-281 (359)
276 PRK05282 (alpha)-aspartyl dipe 41.4 1.9E+02 0.004 24.5 7.8 85 123-211 31-128 (233)
277 KOG1200 Mitochondrial/plastidi 40.6 1.3E+02 0.0028 24.6 6.3 25 135-159 23-47 (256)
278 TIGR03709 PPK2_rel_1 polyphosp 37.6 44 0.00096 28.7 3.6 37 123-159 55-93 (264)
279 PF03610 EIIA-man: PTS system 36.4 1.7E+02 0.0036 21.3 6.7 72 125-211 2-74 (116)
280 TIGR03707 PPK2_P_aer polyphosp 36.0 48 0.001 27.9 3.5 37 123-159 30-68 (230)
281 PF10605 3HBOH: 3HB-oligomer h 35.8 28 0.00061 33.4 2.3 47 314-360 552-605 (690)
282 PF03681 UPF0150: Uncharacteri 35.6 46 0.00099 19.7 2.5 34 148-187 11-44 (48)
283 PRK13255 thiopurine S-methyltr 35.5 49 0.0011 27.6 3.5 16 143-158 52-67 (218)
284 COG1506 DAP2 Dipeptidyl aminop 35.5 1.3E+02 0.0029 29.7 7.0 64 121-190 549-615 (620)
285 PRK06731 flhF flagellar biosyn 34.5 3.1E+02 0.0067 23.8 8.5 76 140-233 143-219 (270)
286 PF13207 AAA_17: AAA domain; P 34.2 66 0.0014 23.3 3.8 31 126-158 1-32 (121)
287 PF09370 TIM-br_sig_trns: TIM- 34.0 92 0.002 26.7 4.8 88 141-236 161-249 (268)
288 KOG2170 ATPase of the AAA+ sup 33.5 1.6E+02 0.0034 26.1 6.1 30 121-150 107-138 (344)
289 TIGR03840 TMPT_Se_Te thiopurin 33.4 51 0.0011 27.3 3.3 16 143-158 49-64 (213)
290 TIGR00632 vsr DNA mismatch end 33.3 1.5E+02 0.0032 21.9 5.2 15 142-156 99-113 (117)
291 PRK11460 putative hydrolase; P 33.3 2.1E+02 0.0046 23.9 7.1 42 122-163 147-191 (232)
292 PF06500 DUF1100: Alpha/beta h 32.8 61 0.0013 29.9 3.9 64 315-379 188-255 (411)
293 PF12242 Eno-Rase_NADH_b: NAD( 32.2 89 0.0019 21.0 3.5 42 175-220 17-61 (78)
294 PRK05579 bifunctional phosphop 31.3 4.3E+02 0.0093 24.5 10.1 59 139-202 135-196 (399)
295 PRK12724 flagellar biosynthesi 31.2 3.6E+02 0.0077 25.3 8.4 76 142-233 291-367 (432)
296 TIGR03249 KdgD 5-dehydro-4-deo 31.2 3.6E+02 0.0079 23.6 11.7 89 135-239 24-112 (296)
297 PRK00889 adenylylsulfate kinas 29.3 1.2E+02 0.0026 23.9 4.8 36 123-158 3-40 (175)
298 PF11713 Peptidase_C80: Peptid 29.2 28 0.00061 27.2 1.1 35 173-207 78-116 (157)
299 TIGR00521 coaBC_dfp phosphopan 29.1 4.3E+02 0.0094 24.4 8.7 75 125-202 114-193 (390)
300 COG1255 Uncharacterized protei 28.8 61 0.0013 23.7 2.5 23 137-159 23-45 (129)
301 cd00006 PTS_IIA_man PTS_IIA, P 28.7 2.4E+02 0.0052 20.7 6.1 72 125-211 3-74 (122)
302 COG1576 Uncharacterized conser 28.6 2.1E+02 0.0046 22.3 5.6 55 142-211 60-114 (155)
303 PF09419 PGP_phosphatase: Mito 28.5 1.3E+02 0.0028 23.9 4.6 55 145-206 35-89 (168)
304 PRK14457 ribosomal RNA large s 28.4 4.5E+02 0.0097 23.8 9.0 77 125-211 259-335 (345)
305 PRK00726 murG undecaprenyldiph 28.1 4.4E+02 0.0095 23.6 9.2 35 125-159 4-38 (357)
306 PRK14729 miaA tRNA delta(2)-is 27.9 4.3E+02 0.0092 23.4 8.3 75 125-203 5-101 (300)
307 PF03853 YjeF_N: YjeF-related 27.8 90 0.002 24.7 3.7 34 123-156 25-58 (169)
308 PF08484 Methyltransf_14: C-me 27.2 2.6E+02 0.0055 22.0 6.1 51 177-236 53-103 (160)
309 PF03976 PPK2: Polyphosphate k 26.9 32 0.0007 28.8 1.1 37 123-159 30-68 (228)
310 PRK09936 hypothetical protein; 26.5 1.7E+02 0.0038 25.5 5.3 31 135-165 36-66 (296)
311 PLN02924 thymidylate kinase 25.7 1.7E+02 0.0037 24.4 5.2 41 121-161 13-55 (220)
312 PF11080 DUF2622: Protein of u 25.6 2.3E+02 0.0049 20.1 4.8 67 125-191 9-75 (96)
313 PLN02748 tRNA dimethylallyltra 25.4 5.1E+02 0.011 24.6 8.6 79 121-203 19-120 (468)
314 PF04763 DUF562: Protein of un 24.7 2.7E+02 0.0059 21.1 5.3 40 121-160 15-61 (146)
315 PF00448 SRP54: SRP54-type pro 24.7 2.7E+02 0.0059 22.6 6.1 77 139-233 72-148 (196)
316 TIGR02690 resist_ArsH arsenica 24.4 4.2E+02 0.0091 22.1 9.0 37 124-160 27-67 (219)
317 PF01656 CbiA: CobQ/CobB/MinD/ 24.0 1.2E+02 0.0026 24.2 4.0 32 127-158 2-35 (195)
318 PRK00091 miaA tRNA delta(2)-is 24.0 4.1E+02 0.0089 23.5 7.4 67 124-192 4-93 (307)
319 COG0331 FabD (acyl-carrier-pro 23.6 1E+02 0.0022 27.3 3.6 28 184-211 73-101 (310)
320 PRK05571 ribose-5-phosphate is 23.5 3.5E+02 0.0077 20.9 7.2 76 140-236 16-91 (148)
321 PHA02114 hypothetical protein 23.4 1.2E+02 0.0026 21.3 3.1 35 123-157 82-116 (127)
322 PRK07933 thymidylate kinase; V 23.1 1.9E+02 0.0042 23.8 5.0 39 126-164 2-42 (213)
323 PF13439 Glyco_transf_4: Glyco 23.0 3.3E+02 0.0072 20.7 6.4 29 132-160 11-39 (177)
324 COG0426 FpaA Uncharacterized f 23.0 4.3E+02 0.0094 24.3 7.3 37 123-159 248-284 (388)
325 KOG3551 Syntrophins (type beta 23.0 87 0.0019 28.3 2.9 37 98-134 452-496 (506)
326 TIGR02821 fghA_ester_D S-formy 22.9 2.9E+02 0.0063 23.8 6.4 59 122-189 210-272 (275)
327 cd07198 Patatin Patatin-like p 22.9 1.7E+02 0.0037 23.0 4.6 23 196-222 27-49 (172)
328 TIGR02069 cyanophycinase cyano 22.9 3.2E+02 0.0069 23.4 6.3 36 321-356 3-38 (250)
329 cd01523 RHOD_Lact_B Member of 22.8 1.3E+02 0.0028 20.9 3.5 28 122-153 61-88 (100)
330 PF08433 KTI12: Chromatin asso 22.4 2.8E+02 0.006 24.1 5.9 38 125-162 2-41 (270)
331 COG1598 Predicted nuclease of 22.0 2E+02 0.0042 19.0 3.9 36 148-189 13-48 (73)
332 COG2240 PdxK Pyridoxal/pyridox 21.8 5.4E+02 0.012 22.5 10.3 99 129-241 11-117 (281)
333 PF04084 ORC2: Origin recognit 21.8 5.9E+02 0.013 22.8 8.2 25 184-208 126-150 (326)
334 PF14253 AbiH: Bacteriophage a 21.3 71 0.0015 27.4 2.2 13 195-207 235-247 (270)
335 COG1448 TyrB Aspartate/tyrosin 21.2 5.1E+02 0.011 23.8 7.2 87 122-235 170-263 (396)
336 KOG0673 Thymidylate synthase [ 21.1 1.7E+02 0.0037 24.4 4.0 46 153-199 114-159 (293)
337 TIGR00128 fabD malonyl CoA-acy 21.0 1.3E+02 0.0029 26.0 3.9 18 194-211 82-99 (290)
338 PRK13230 nitrogenase reductase 20.6 1.8E+02 0.0038 25.2 4.5 38 125-163 3-42 (279)
339 PF03033 Glyco_transf_28: Glyc 20.6 1E+02 0.0022 23.0 2.7 34 126-159 2-35 (139)
340 TIGR03127 RuMP_HxlB 6-phospho 20.6 2.4E+02 0.0052 22.3 5.0 32 126-157 32-63 (179)
341 cd00951 KDGDH 5-dehydro-4-deox 20.3 5.8E+02 0.013 22.2 11.5 89 135-239 19-107 (289)
342 cd01983 Fer4_NifH The Fer4_Nif 20.2 1.9E+02 0.004 19.4 3.9 19 139-157 16-34 (99)
343 PRK05568 flavodoxin; Provision 20.1 3.5E+02 0.0075 20.3 5.6 36 124-159 4-39 (142)
344 KOG2805 tRNA (5-methylaminomet 20.1 3.4E+02 0.0075 24.0 5.8 35 123-161 6-40 (377)
345 COG5023 Tubulin [Cytoskeleton] 20.0 2.9E+02 0.0062 25.2 5.4 61 173-236 108-172 (443)
No 1
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2e-49 Score=356.01 Aligned_cols=370 Identities=74% Similarity=1.235 Sum_probs=288.9
Q ss_pred chhhhhhhcccCCcchHHHHHH------HHHHHHHHHHHHHHHHHHhcCCCC----------CCCCCcccchhhhhhcch
Q 016589 2 STAEVDQLTSGASNRIIPILKT------LRTLIFFIQSFIFSLVILLLPRRP----------AAGAPKSQVKSWKRKSML 65 (386)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 65 (386)
...||+++||||||||.++++. |+++++++.++++++ +++++.++ .+.+...+...|+++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (395)
T PLN02652 4 GSGEMMMLTSGASGRIIPVFRSLLSRRALRRCLVFLHSLFLWL-LLLLRLRPRRRVSPLSSPEAGAVPAPSRRWRRRMAW 82 (395)
T ss_pred CccceeeeecCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccccccccCccCCccccCCCCccccchhccch
Confidence 3579999999999999877754 478889999999988 66666432 223333444568888888
Q ss_pred hhchHHHHHHHHHHhhhhcccccCCCCCCccccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHH
Q 016589 66 RREDEDTMRRRALAEDLKMGFETDDGEVPCRWSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQ 145 (386)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~ 145 (386)
..++++...|+.++..+.. ..++. ........+...++..+++..|.|..++.+++||++||++++...|..+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~---~~~~~-g~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~ 158 (395)
T PLN02652 83 KLEEEDTRRRRALAEGVEM---VEDGE-GTRWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQ 158 (395)
T ss_pred hhcchHHHHHHHHHHhhhh---eecCC-CceEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHH
Confidence 8889999999999999876 33332 3356677788899999999999997666788999999999998889999999
Q ss_pred HHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCcccc
Q 016589 146 LTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEA 225 (386)
Q Consensus 146 L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~ 225 (386)
|+++||+|+++|+||||.|++...+..+++.+.+|+.++++++..+.+..+++++||||||.+++. ++ .+|+...
T Consensus 159 L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~----~a-~~p~~~~ 233 (395)
T PLN02652 159 LTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLK----AA-SYPSIED 233 (395)
T ss_pred HHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHH----HH-hccCccc
Confidence 999999999999999999988766666888999999999999988776668999999999999988 44 5665444
Q ss_pred ceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHH
Q 016589 226 MLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLS 305 (386)
Q Consensus 226 ~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (386)
+++++|+.+|........+....+..+.....+.+.+............++......+.++....+........+.....
T Consensus 234 ~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~ 313 (395)
T PLN02652 234 KLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRIS 313 (395)
T ss_pred ccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHH
Confidence 79999999998765543333333334444445554443333333344455666666666776655555555555555555
Q ss_pred HHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhc
Q 016589 306 SYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 306 ~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 381 (386)
.++...+.++++|+|+++|++|.++|++.++++++.+.+.+++++++|+++|..+.+++++++.+.+.+||+.+++
T Consensus 314 ~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 314 SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 5567788999999999999999999999999999998776689999999999998887899999999999998875
No 2
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=7.4e-39 Score=262.56 Aligned_cols=281 Identities=42% Similarity=0.720 Sum_probs=249.5
Q ss_pred CCCccccceeEeccCCceEEEEEecCCCC-CCceEEEEECCCCCCh-hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC
Q 016589 92 EVPCRWSTSLFFGVKRNALFCRSWIPVSG-ELKGILIIIHGLNEHS-GRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG 169 (386)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~-~~~p~vv~lHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~ 169 (386)
..........+.+.+|..+++..|.|..+ +++..|+++||++... ..|..++..|+..||.|+++|++|||.|++...
T Consensus 22 ~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~ 101 (313)
T KOG1455|consen 22 DGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA 101 (313)
T ss_pred CCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc
Confidence 34455677889999999999999999664 7788999999999876 678999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHh--CCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC---CCc
Q 016589 170 YVPSLDHVVADTGAFLEKIKLE--NPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP---AHP 244 (386)
Q Consensus 170 ~~~~~~~~~~d~~~~l~~l~~~--~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~---~~~ 244 (386)
+..+++..++|+...++.+..+ +++.+.+++||||||.+++. ++.++|+ ..+|+|+++|.....+ ..+
T Consensus 102 yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll----~~~k~p~---~w~G~ilvaPmc~i~~~~kp~p 174 (313)
T KOG1455|consen 102 YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALL----IALKDPN---FWDGAILVAPMCKISEDTKPHP 174 (313)
T ss_pred cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHH----HHhhCCc---ccccceeeecccccCCccCCCc
Confidence 9999999999999999986554 45668999999999999999 8888999 7999999998876553 455
Q ss_pred hhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEee
Q 016589 245 IVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHG 324 (386)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 324 (386)
....+...+..+.|.+..............+++.......+|+.+.+..+.....++++...++.+++.++++|.+++||
T Consensus 175 ~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG 254 (313)
T KOG1455|consen 175 PVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHG 254 (313)
T ss_pred HHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEec
Confidence 66777788888889888555554566788899999999999999999999999999999999999999999999999999
Q ss_pred CCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccC---CccHHHHHHHHHHHHhhh
Q 016589 325 TGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLF---ELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 325 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~~fl~~~ 379 (386)
+.|.++++..++.+++...+.++++++|||+-|.++. +++.+.+...|.+||+++
T Consensus 255 ~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 255 TDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999884 346788999999999876
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.4e-35 Score=264.82 Aligned_cols=277 Identities=35% Similarity=0.564 Sum_probs=196.0
Q ss_pred ccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhh-HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChH
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGR-YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLD 175 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 175 (386)
.++..+.+.+|.++++..|.|.+++++++|||+||++++... |..+++.|+++||+|+++|+||||.|+++..+..+++
T Consensus 61 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 140 (349)
T PLN02385 61 TEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFD 140 (349)
T ss_pred eeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHH
Confidence 455678889999999999998765678999999999988765 6889999998899999999999999987766556899
Q ss_pred HHHHHHHHHHHHHHHh--CCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCC---chhhhHh
Q 016589 176 HVVADTGAFLEKIKLE--NPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAH---PIVGAVA 250 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~--~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~---~~~~~~~ 250 (386)
++++|+.++++.+... .+..+++++||||||.+++. ++.++|+ +++++|+++|........ .......
T Consensus 141 ~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~----~a~~~p~---~v~glVLi~p~~~~~~~~~~~~~~~~~~ 213 (349)
T PLN02385 141 DLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALK----VHLKQPN---AWDGAILVAPMCKIADDVVPPPLVLQIL 213 (349)
T ss_pred HHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHH----HHHhCcc---hhhheeEecccccccccccCchHHHHHH
Confidence 9999999999988754 23447999999999999999 9999999 899999999876543211 1111111
Q ss_pred hhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCcc
Q 016589 251 PLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVT 330 (386)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v 330 (386)
.......+................+.........+..............+.+....+....+.++++|+|+++|++|.++
T Consensus 214 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv 293 (349)
T PLN02385 214 ILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVT 293 (349)
T ss_pred HHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCcc
Confidence 11222222211100000000011111111100111111222223333344444444556778899999999999999999
Q ss_pred ChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHH----HHHHHHHHHhhhhc
Q 016589 331 DPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDE----VAQDIIVWLEKKLG 381 (386)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~----~~~~i~~fl~~~~~ 381 (386)
|++.++.+++.+.+++++++++|++||.++.+ ++++ +.+.|.+||+++.+
T Consensus 294 ~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e-~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 294 DPSVSKFLYEKASSSDKKLKLYEDAYHSILEG-EPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred ChHHHHHHHHHcCCCCceEEEeCCCeeecccC-CChhhHHHHHHHHHHHHHHhcc
Confidence 99999999998866668999999999998876 5544 88999999998875
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=3e-34 Score=250.18 Aligned_cols=268 Identities=27% Similarity=0.514 Sum_probs=192.9
Q ss_pred eEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHH
Q 016589 101 LFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVAD 180 (386)
Q Consensus 101 ~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d 180 (386)
.+...||.+++|+.|.|.+ .++++|+++||++++...|..+++.|+++||.|+++|+||||.|++......++.+.++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~-~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT-YPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCC-CCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 5677899999999998853 456888888999999999999999999999999999999999997644333477778888
Q ss_pred HHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhh-hhhcCC
Q 016589 181 TGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLF-SLVVPK 259 (386)
Q Consensus 181 ~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~ 259 (386)
+.+.++.+....+..+++++||||||.+++. +|.++|+ +++++|+++|...... ......+.... ....+.
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~----~a~~~p~---~i~~lil~~p~~~~~~-~~~~~~~~~~~~~~~~~~ 154 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISIL----AAYKNPN---LFTAMILMSPLVNAEA-VPRLNLLAAKLMGIFYPN 154 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHH----HHHhCcc---ccceEEEecccccccc-ccHHHHHHHHHHHHhCCC
Confidence 8888888776565568999999999999999 9999998 8999999999765321 11111111111 111111
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHH
Q 016589 260 YQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLY 339 (386)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~ 339 (386)
....... ......+.........++..........+.........+....+.++++|+|+++|++|.++|++.+.++.
T Consensus 155 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~ 232 (276)
T PHA02857 155 KIVGKLC--PESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFM 232 (276)
T ss_pred CccCCCC--HhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHH
Confidence 1110000 01112222333333344433333333333344444444556778899999999999999999999999998
Q ss_pred HHhhcCCCcEEEcCCCCCcccCCcc--HHHHHHHHHHHHhhhh
Q 016589 340 NEAASRFKDIKLYEGLLHDLLFELE--RDEVAQDIIVWLEKKL 380 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~~~ 380 (386)
+.+.. ++++++++++||.++.|.. .+++.+.+.+||+++.
T Consensus 233 ~~~~~-~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 233 QHANC-NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HHccC-CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 88753 4899999999999998833 7889999999999863
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=7.6e-34 Score=253.66 Aligned_cols=278 Identities=34% Similarity=0.605 Sum_probs=194.6
Q ss_pred ccceeEeccCCceEEEEEecCCCC-CCceEEEEECCCCCChh-hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCh
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVSG-ELKGILIIIHGLNEHSG-RYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSL 174 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~~-~~~p~vv~lHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~ 174 (386)
.+...+.+.||.+++|+.|.|... ..+++|||+||++.+.. .|..++..|+++||+|+++|+||||.|++...+..++
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~ 111 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNV 111 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCH
Confidence 445678888999999999987643 45789999999986643 4677888899899999999999999998665555688
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCc---hhhhH
Q 016589 175 DHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHP---IVGAV 249 (386)
Q Consensus 175 ~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~---~~~~~ 249 (386)
+.+++|+.++++.+.... +..+++++||||||.+++. ++.++|+ +|+++|+++|......... .....
T Consensus 112 ~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~----~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~ 184 (330)
T PLN02298 112 DLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLL----IHLANPE---GFDGAVLVAPMCKISDKIRPPWPIPQI 184 (330)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHH----HHhcCcc---cceeEEEecccccCCcccCCchHHHHH
Confidence 999999999999997642 3447999999999999999 8999998 8999999998765432111 11111
Q ss_pred hhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCc
Q 016589 250 APLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKV 329 (386)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 329 (386)
........+..........................++..+..........+..+........+.++++|+|+++|++|.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~i 264 (330)
T PLN02298 185 LTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVV 264 (330)
T ss_pred HHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCC
Confidence 12222222222111100000000011111111112333222222233333444444445677889999999999999999
Q ss_pred cChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccH----HHHHHHHHHHHhhhhcC
Q 016589 330 TDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELER----DEVAQDIIVWLEKKLGC 382 (386)
Q Consensus 330 v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~----~~~~~~i~~fl~~~~~~ 382 (386)
+|++.++.+++.++.++++++++++++|.++.+ ++ +++.+.|.+||++++..
T Consensus 265 vp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e-~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 265 TDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFG-EPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred CCHHHHHHHHHHhccCCceEEEcCCcEeeeecC-CCHHHHHHHHHHHHHHHHHhccC
Confidence 999999999998876668999999999998875 33 56888999999998743
No 6
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=100.00 E-value=9.8e-34 Score=245.21 Aligned_cols=281 Identities=35% Similarity=0.559 Sum_probs=229.9
Q ss_pred CccccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCC-CCCCCCC
Q 016589 94 PCRWSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSD-GLHGYVP 172 (386)
Q Consensus 94 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~-~~~~~~~ 172 (386)
+....+..+...||..++|..|.+..+ ++.+||++||++.+...|..++..|..+||.|+++|+||||.|. +..+...
T Consensus 6 ~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~ 84 (298)
T COG2267 6 PRTRTEGYFTGADGTRLRYRTWAAPEP-PKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVD 84 (298)
T ss_pred ccccccceeecCCCceEEEEeecCCCC-CCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCch
Confidence 345667889999999999999987643 23799999999999999999999999999999999999999998 6767766
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC---CCchhhhH
Q 016589 173 SLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP---AHPIVGAV 249 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~---~~~~~~~~ 249 (386)
++.++.+|+..+++.+....+..+++++||||||.+++. ++.+++. +++++|+.+|.+.... ........
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~----~~~~~~~---~i~~~vLssP~~~l~~~~~~~~~~~~~ 157 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALL----YLARYPP---RIDGLVLSSPALGLGGAILRLILARLA 157 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHH----HHHhCCc---cccEEEEECccccCChhHHHHHHHHHh
Confidence 899999999999999988777789999999999999999 9999997 8999999999998874 22222222
Q ss_pred hhhhhhhcCCccccC---CCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHH-HHHhhccCCCccEEEEeeC
Q 016589 250 APLFSLVVPKYQFKG---ANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSS-YLKRNFKSVSVPFFVLHGT 325 (386)
Q Consensus 250 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P~lii~G~ 325 (386)
......+.+.+.... ........+.++.....+..+|....+.....+......... ........+++|+|+++|+
T Consensus 158 ~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~ 237 (298)
T COG2267 158 LKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGG 237 (298)
T ss_pred cccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecC
Confidence 233333444443332 122334566788888888999987777777777777666554 3344467789999999999
Q ss_pred CCCccC-hHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccH--HHHHHHHHHHHhhhhcC
Q 016589 326 GDKVTD-PLASQDLYNEAASRFKDIKLYEGLLHDLLFELER--DEVAQDIIVWLEKKLGC 382 (386)
Q Consensus 326 ~D~~v~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~--~~~~~~i~~fl~~~~~~ 382 (386)
+|.+++ .+...++++....+++++++++|+.|..+.|.+. +++.+.+.+|+.++...
T Consensus 238 ~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 238 DDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred CCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 999999 7889999999888778999999999999999887 99999999999987643
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=3.6e-32 Score=242.01 Aligned_cols=276 Identities=19% Similarity=0.265 Sum_probs=192.1
Q ss_pred ccccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC-----C
Q 016589 95 CRWSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLH-----G 169 (386)
Q Consensus 95 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-----~ 169 (386)
...++..+...+|.+++|..|++. .++++||++||++++...|..++..|++.||+|+++|+||||.|+.+. +
T Consensus 28 ~~~~~~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~ 105 (330)
T PRK10749 28 RQREEAEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRG 105 (330)
T ss_pred hhccceEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcC
Confidence 345567788899999999999875 335799999999999989999999999999999999999999997542 2
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCc--hhh
Q 016589 170 YVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHP--IVG 247 (386)
Q Consensus 170 ~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~--~~~ 247 (386)
..++++++++|+.++++.+....+..+++++||||||.+++. +++++|+ +++++|+++|........+ ...
T Consensus 106 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~----~a~~~p~---~v~~lvl~~p~~~~~~~~~~~~~~ 178 (330)
T PRK10749 106 HVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTL----FLQRHPG---VFDAIALCAPMFGIVLPLPSWMAR 178 (330)
T ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHH----HHHhCCC---CcceEEEECchhccCCCCCcHHHH
Confidence 234789999999999998765555568999999999999999 8999999 8999999999765432211 111
Q ss_pred hHhhhhhhhc---CCccc--cCCCC---CCCCCCCCHHHH---HHHh-cCCCCccCCcchhHHHHHHHHHHHHHhhccCC
Q 016589 248 AVAPLFSLVV---PKYQF--KGANK---RGVPVSRDPAAL---LAKY-SDPLVYTGPIRVRTGHEILRLSSYLKRNFKSV 315 (386)
Q Consensus 248 ~~~~~~~~~~---~~~~~--~~~~~---~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 315 (386)
.+........ ..... ..... ........++.. ...+ .++..........+..+.......+...+.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 258 (330)
T PRK10749 179 RILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDI 258 (330)
T ss_pred HHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCC
Confidence 1111111110 00000 00000 000111222221 1222 23322121223333444443334455678889
Q ss_pred CccEEEEeeCCCCccChHHHHHHHHHhhc-----CCCcEEEcCCCCCcccCCcc--HHHHHHHHHHHHhhh
Q 016589 316 SVPFFVLHGTGDKVTDPLASQDLYNEAAS-----RFKDIKLYEGLLHDLLFELE--RDEVAQDIIVWLEKK 379 (386)
Q Consensus 316 ~~P~lii~G~~D~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~~ 379 (386)
++|+|+++|++|.+++++.++.+++.+++ .+++++++||++|.++.|.. .+++.+.|.+||+++
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999988887743 34689999999999998844 688999999999864
No 8
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=100.00 E-value=7.1e-31 Score=232.83 Aligned_cols=266 Identities=23% Similarity=0.429 Sum_probs=200.5
Q ss_pred EeccCCceEEEEEecCCCCCCceEEEEECCCCCChhh-H-------------------------HHHHHHHHhCCCeEEE
Q 016589 102 FFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGR-Y-------------------------AQFARQLTSCNFGVYA 155 (386)
Q Consensus 102 ~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~-~-------------------------~~~~~~L~~~G~~vi~ 155 (386)
+.+.||.+|+++.|.|+ +++.+|+++||++.+... | ..+++.|.++||.|++
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEE
Confidence 45679999999999875 457899999999988761 1 4689999999999999
Q ss_pred eCCCCCCCCCCC---CCCCCChHHHHHHHHHHHHHHHH-------------------hCC-CCCEEEEEechhhHHHHhh
Q 016589 156 MDWIGHGGSDGL---HGYVPSLDHVVADTGAFLEKIKL-------------------ENP-TVPCFLFGHSTGGAVVLKR 212 (386)
Q Consensus 156 ~D~~G~G~S~~~---~~~~~~~~~~~~d~~~~l~~l~~-------------------~~~-~~~i~lvGhS~Gg~~a~~~ 212 (386)
+|+||||.|++. .++..+++++++|+..+++.++. .++ +.|++++||||||.+++.
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~- 158 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR- 158 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH-
Confidence 999999999854 23334889999999999998865 233 568999999999999999
Q ss_pred hhhHhhcCCccc-----cceeEEEEcCcccccCCCC-----ch---hhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHH
Q 016589 213 TFVQAASYPHIE-----AMLEGIVLSAPALRVEPAH-----PI---VGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAAL 279 (386)
Q Consensus 213 ~~~~a~~~p~~~-----~~v~~lvl~~p~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (386)
++..+++.. ..++|+|+++|........ .. ...+...+..+.+...... ......++...
T Consensus 159 ---~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~----~~~~~~~~~~~ 231 (332)
T TIGR01607 159 ---LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK----KIRYEKSPYVN 231 (332)
T ss_pred ---HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC----ccccccChhhh
Confidence 776554311 1588999999886542210 01 1112222333444433221 12344555666
Q ss_pred HHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCC--CccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCC
Q 016589 280 LAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSV--SVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLH 357 (386)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH 357 (386)
.....|+..........+..+++.....+...+..+ ++|+|+++|++|.+++++.++.+++.+..++++++++++++|
T Consensus 232 ~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H 311 (332)
T TIGR01607 232 DIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDH 311 (332)
T ss_pred hHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCC
Confidence 666778887776777778888877766665666666 799999999999999999999998887766689999999999
Q ss_pred cccCCccHHHHHHHHHHHHh
Q 016589 358 DLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 358 ~~~~~~~~~~~~~~i~~fl~ 377 (386)
.++.|.+++++.+.|.+||+
T Consensus 312 ~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 312 VITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCccCCCHHHHHHHHHHHhh
Confidence 99998778999999999986
No 9
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=3.7e-31 Score=232.76 Aligned_cols=258 Identities=17% Similarity=0.182 Sum_probs=171.3
Q ss_pred eeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC------CCCC
Q 016589 100 SLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG------YVPS 173 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~------~~~~ 173 (386)
..+.+.+|.+++|...++. .|+|||+||+++++..|..+++.|++. |+|+++|+||||.|+.+.. ..++
T Consensus 10 ~~~~~~~~~~i~y~~~G~~----~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~ 84 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTS----GPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYT 84 (294)
T ss_pred CceEEEcCeEEEEEEcCCC----CCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCC
Confidence 4456668999999887642 378999999999999999999999876 7999999999999986531 2468
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC---CCchhhhHh
Q 016589 174 LDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP---AHPIVGAVA 250 (386)
Q Consensus 174 ~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~---~~~~~~~~~ 250 (386)
++++++|+.++++.+..+ +++++||||||.+++. +|+++|+ +|+++|++++...... .........
T Consensus 85 ~~~~a~~l~~~l~~l~~~----~~~lvGhS~Gg~va~~----~a~~~p~---~v~~lili~~~~~~~~~~~~~~~~~~~~ 153 (294)
T PLN02824 85 FETWGEQLNDFCSDVVGD----PAFVICNSVGGVVGLQ----AAVDAPE---LVRGVMLINISLRGLHIKKQPWLGRPFI 153 (294)
T ss_pred HHHHHHHHHHHHHHhcCC----CeEEEEeCHHHHHHHH----HHHhChh---heeEEEEECCCcccccccccchhhhHHH
Confidence 999999999999988653 5999999999999999 9999999 8999999987642211 000111100
Q ss_pred hhhhhhcCCccc-----c---------CCCC--CCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHH--HHHHHhhc
Q 016589 251 PLFSLVVPKYQF-----K---------GANK--RGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRL--SSYLKRNF 312 (386)
Q Consensus 251 ~~~~~~~~~~~~-----~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 312 (386)
..+......... . .... .........+. ...+..+..... ........... .......+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 230 (294)
T PLN02824 154 KAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDEL-VEAILRPGLEPG--AVDVFLDFISYSGGPLPEELL 230 (294)
T ss_pred HHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHH-HHHHHhccCCch--HHHHHHHHhccccccchHHHH
Confidence 000000000000 0 0000 00000011111 111111111000 00111111100 01123457
Q ss_pred cCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 313 KSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 313 ~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
+++++|+|+|+|++|.++|.+.++.+.+..++ .++++++++||+++.| +++++.+.|.+|++++
T Consensus 231 ~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 231 PAVKCPVLIAWGEKDPWEPVELGRAYANFDAV--EDFIVLPGVGHCPQDE-APELVNPLIESFVARH 294 (294)
T ss_pred hhcCCCeEEEEecCCCCCChHHHHHHHhcCCc--cceEEeCCCCCChhhh-CHHHHHHHHHHHHhcC
Confidence 78999999999999999999988886665543 7899999999999988 9999999999999763
No 10
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.97 E-value=3.1e-30 Score=215.57 Aligned_cols=268 Identities=21% Similarity=0.218 Sum_probs=177.8
Q ss_pred ccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChH
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG-YVPSLD 175 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~ 175 (386)
..++.+.+.+|.+++|..-++. ..|+|+++||++.++.+|+.+...|+.+||+|+++|+||+|.|+.++. ..|+..
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~---~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~ 97 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPG---DGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTID 97 (322)
T ss_pred hcceeeEEEccEEEEEEeecCC---CCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHH
Confidence 4456777888888888876553 468999999999999999999999999999999999999999998876 678999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhh-h
Q 016589 176 HVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLF-S 254 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~ 254 (386)
..+.|+..+++.+..+ +++++||+||+.+|+. +|..+|+ +|+++|+++.........+......... .
T Consensus 98 ~l~~di~~lld~Lg~~----k~~lvgHDwGaivaw~----la~~~Pe---rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~ 166 (322)
T KOG4178|consen 98 ELVGDIVALLDHLGLK----KAFLVGHDWGAIVAWR----LALFYPE---RVDGLVTLNVPFPNPKLKPLDSSKAIFGKS 166 (322)
T ss_pred HHHHHHHHHHHHhccc----eeEEEeccchhHHHHH----HHHhChh---hcceEEEecCCCCCcccchhhhhccccCcc
Confidence 9999999999999854 5999999999999999 9999999 9999999876654111000000000000 0
Q ss_pred hhcCCcc---------------------cc--CC----CCC--CCCCCCCHHHHHHHhcCCCCccC-CcchhHHHHHHHH
Q 016589 255 LVVPKYQ---------------------FK--GA----NKR--GVPVSRDPAALLAKYSDPLVYTG-PIRVRTGHEILRL 304 (386)
Q Consensus 255 ~~~~~~~---------------------~~--~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 304 (386)
.....+. +. .. ... ........++-.+.+.......+ .-......++.+.
T Consensus 167 ~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~ 246 (322)
T KOG4178|consen 167 YYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRN 246 (322)
T ss_pred ceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhC
Confidence 0000000 00 00 000 00000001111111111111111 0111222222222
Q ss_pred HHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 305 SSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 305 ~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
.+.....+.++++|+++++|+.|.+.+.....+.+++.-..-.+.++++|+||+...| +++++++.|.+|+++.
T Consensus 247 w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe-~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 247 WEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQE-KPQEVNQAILGFINSF 320 (322)
T ss_pred chhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCccccccc-CHHHHHHHHHHHHHhh
Confidence 2222445678899999999999999987744444444332223678899999999888 9999999999999874
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=4.1e-30 Score=226.84 Aligned_cols=254 Identities=17% Similarity=0.139 Sum_probs=163.9
Q ss_pred ceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHHHHHHHHHHHH
Q 016589 108 NALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG-YVPSLDHVVADTGAFLE 186 (386)
Q Consensus 108 ~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~d~~~~l~ 186 (386)
.+++|...+++ ..|+|||+||++++...|..+++.|.+.||+|+++|+||||.|+.+.. ..++++++++|+.++++
T Consensus 34 ~~i~y~~~G~~---~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~ 110 (302)
T PRK00870 34 LRMHYVDEGPA---DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFE 110 (302)
T ss_pred EEEEEEecCCC---CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 57888876543 247899999999999999999999987899999999999999976542 23588999999999999
Q ss_pred HHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhh--hhcCCccccC
Q 016589 187 KIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFS--LVVPKYQFKG 264 (386)
Q Consensus 187 ~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 264 (386)
++..+ +++++||||||.+++. +|.++|+ +|+++|++++.......... ........ ...+......
T Consensus 111 ~l~~~----~v~lvGhS~Gg~ia~~----~a~~~p~---~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 178 (302)
T PRK00870 111 QLDLT----DVTLVCQDWGGLIGLR----LAAEHPD---RFARLVVANTGLPTGDGPMP-DAFWAWRAFSQYSPVLPVGR 178 (302)
T ss_pred HcCCC----CEEEEEEChHHHHHHH----HHHhChh---heeEEEEeCCCCCCccccch-HHHhhhhcccccCchhhHHH
Confidence 87543 5999999999999999 9999999 89999999875322111000 00000000 0000000000
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCCCccCC-cchhHH---------HHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHH
Q 016589 265 ANKRGVPVSRDPAALLAKYSDPLVYTGP-IRVRTG---------HEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLA 334 (386)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~ 334 (386)
............+.. ..+..+...... ...... .............+.++++|+++|+|++|.++|...
T Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 257 (302)
T PRK00870 179 LVNGGTVRDLSDAVR-AAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD 257 (302)
T ss_pred HhhccccccCCHHHH-HHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch
Confidence 000000000111111 111110000000 000000 000001112235578899999999999999999866
Q ss_pred HHHHHHHhhcC-CCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 335 SQDLYNEAASR-FKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 335 ~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
+.+.+.+++. +..+.+++++||+++.| +++++.+.|.+|++++
T Consensus 258 -~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 258 -AILQKRIPGAAGQPHPTIKGAGHFLQED-SGEELAEAVLEFIRAT 301 (302)
T ss_pred -HHHHhhcccccccceeeecCCCccchhh-ChHHHHHHHHHHHhcC
Confidence 7777777752 12378999999999888 9999999999999764
No 12
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.97 E-value=7.1e-30 Score=222.38 Aligned_cols=259 Identities=17% Similarity=0.162 Sum_probs=172.3
Q ss_pred eEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHH
Q 016589 101 LFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVAD 180 (386)
Q Consensus 101 ~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d 180 (386)
.+...+|.+++|..+... +..++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+.. .++++++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~--~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~ 80 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGK--EGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRH-PYRFPGLAKL 80 (276)
T ss_pred EEeccCCcEEEEEEecCC--CCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCC-cCcHHHHHHH
Confidence 345568889999776322 2347899999999999999999999965 59999999999999986543 3589999999
Q ss_pred HHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhh--hhh-c
Q 016589 181 TGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLF--SLV-V 257 (386)
Q Consensus 181 ~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~--~~~-~ 257 (386)
+.++++++..+ +++++||||||.+++. +|.++|+ +|+++|++++.................. ... .
T Consensus 81 ~~~~i~~l~~~----~~~LvG~S~GG~va~~----~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (276)
T TIGR02240 81 AARMLDYLDYG----QVNAIGVSWGGALAQQ----FAHDYPE---RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQ 149 (276)
T ss_pred HHHHHHHhCcC----ceEEEEECHHHHHHHH----HHHHCHH---HhhheEEeccCCccccCCCchhHHHHhcCchhhhc
Confidence 99999998654 4999999999999999 9999999 8999999998764321111111100000 000 0
Q ss_pred CCccccCCCC-CCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHH-HHHHhhccCCCccEEEEeeCCCCccChHHH
Q 016589 258 PKYQFKGANK-RGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLS-SYLKRNFKSVSVPFFVLHGTGDKVTDPLAS 335 (386)
Q Consensus 258 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~lii~G~~D~~v~~~~~ 335 (386)
.......... .......+++... ........... ........... ....+.++++++|+|+++|++|+++|++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~ 226 (276)
T TIGR02240 150 PSHGIHIAPDIYGGAFRRDPELAM-AHASKVRSGGK--LGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINM 226 (276)
T ss_pred cccccchhhhhccceeeccchhhh-hhhhhcccCCC--chHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHH
Confidence 0000000000 0000001111111 11111110000 01111111110 112345788999999999999999999999
Q ss_pred HHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhc
Q 016589 336 QDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 381 (386)
+.+.+.+++ .+++++++ ||+.+.+ +++++++.|.+|+++.-.
T Consensus 227 ~~l~~~~~~--~~~~~i~~-gH~~~~e-~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 227 RLLAWRIPN--AELHIIDD-GHLFLIT-RAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred HHHHHhCCC--CEEEEEcC-CCchhhc-cHHHHHHHHHHHHHHhhh
Confidence 999988876 88889986 9998888 999999999999987643
No 13
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=2.8e-29 Score=220.93 Aligned_cols=258 Identities=17% Similarity=0.189 Sum_probs=169.4
Q ss_pred EeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHH
Q 016589 102 FFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADT 181 (386)
Q Consensus 102 ~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~ 181 (386)
..+.+|.+++|..++. .|+|||+||++++...|..+++.|++. |+|+++|+||||.|+.+.. .++.+++++|+
T Consensus 11 ~~~~~g~~i~y~~~G~-----g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~dl 83 (295)
T PRK03592 11 RVEVLGSRMAYIETGE-----GDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARYL 83 (295)
T ss_pred EEEECCEEEEEEEeCC-----CCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHH
Confidence 4456899999998763 368999999999999999999999887 5999999999999987653 35899999999
Q ss_pred HHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhc-CC-
Q 016589 182 GAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVV-PK- 259 (386)
Q Consensus 182 ~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~-~~- 259 (386)
.++++.++.+ +++++|||+||.+++. ++.++|+ +|+++|++++....................+. +.
T Consensus 84 ~~ll~~l~~~----~~~lvGhS~Gg~ia~~----~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (295)
T PRK03592 84 DAWFDALGLD----DVVLVGHDWGSALGFD----WAARHPD---RVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGE 152 (295)
T ss_pred HHHHHHhCCC----CeEEEEECHHHHHHHH----HHHhChh---heeEEEEECCCCCCcchhhcchhHHHHHHHHhCccc
Confidence 9999998654 5999999999999999 9999999 89999999975432111100001111111111 00
Q ss_pred ---cc------ccCCCCCCCCCCCCHHHHHHH---hcCCCCccCCcch-------hHHHHHHHHHHHHHhhccCCCccEE
Q 016589 260 ---YQ------FKGANKRGVPVSRDPAALLAK---YSDPLVYTGPIRV-------RTGHEILRLSSYLKRNFKSVSVPFF 320 (386)
Q Consensus 260 ---~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~P~l 320 (386)
.. ..............++..... +.++......... ...........+....+.++++|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 232 (295)
T PRK03592 153 GEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKL 232 (295)
T ss_pred ccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeE
Confidence 00 000000000001112211111 1111000000000 0000111111223455788999999
Q ss_pred EEeeCCCCccChHHHHHHHHH-hhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 321 VLHGTGDKVTDPLASQDLYNE-AASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 321 ii~G~~D~~v~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
+|+|++|.++++....++... .++ .++++++++||+++.+ +++++.+.|.+|+++..
T Consensus 233 ii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e-~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 233 LINAEPGAILTTGAIRDWCRSWPNQ--LEITVFGAGLHFAQED-SPEEIGAAIAAWLRRLR 290 (295)
T ss_pred EEeccCCcccCcHHHHHHHHHhhhh--cceeeccCcchhhhhc-CHHHHHHHHHHHHHHhc
Confidence 999999999966555555444 444 8999999999999988 99999999999998653
No 14
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.6e-29 Score=227.32 Aligned_cols=258 Identities=20% Similarity=0.256 Sum_probs=164.0
Q ss_pred ccCCc-eEEEEEecCCCC-CCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHH
Q 016589 104 GVKRN-ALFCRSWIPVSG-ELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADT 181 (386)
Q Consensus 104 ~~~g~-~l~~~~~~p~~~-~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~ 181 (386)
..+|. +++|...++... ...|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+....++++++++++
T Consensus 67 ~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l 145 (360)
T PLN02679 67 KWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELI 145 (360)
T ss_pred EECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHH
Confidence 33566 899998775311 2347899999999999999999999976 69999999999999987654456899999999
Q ss_pred HHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhh-cCCccccceeEEEEcCcccccCCCCchhhhHh----h---hh
Q 016589 182 GAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAA-SYPHIEAMLEGIVLSAPALRVEPAHPIVGAVA----P---LF 253 (386)
Q Consensus 182 ~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~-~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~----~---~~ 253 (386)
.++++.+..+ +++++||||||.+++. +++ .+|+ +|+++|++++............... . .+
T Consensus 146 ~~~l~~l~~~----~~~lvGhS~Gg~ia~~----~a~~~~P~---rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (360)
T PLN02679 146 LDFLEEVVQK----PTVLIGNSVGSLACVI----AASESTRD---LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLI 214 (360)
T ss_pred HHHHHHhcCC----CeEEEEECHHHHHHHH----HHHhcChh---hcCEEEEECCccccccccccchHHHhhhcchHHHH
Confidence 9999987654 5999999999999998 776 4788 8999999987643211100000000 0 00
Q ss_pred hhhcC--------------CccccCCCCC--CCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHH--HHHHHhhccCC
Q 016589 254 SLVVP--------------KYQFKGANKR--GVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRL--SSYLKRNFKSV 315 (386)
Q Consensus 254 ~~~~~--------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i 315 (386)
..... .......... .......+ .....+..+..... ........... ..+....+.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~i 291 (360)
T PLN02679 215 DFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDD-ELVEIIRGPADDEG--ALDAFVSIVTGPPGPNPIKLIPRI 291 (360)
T ss_pred HHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCH-HHHHHHHhhccCCC--hHHHHHHHHhcCCCCCHHHHhhhc
Confidence 00000 0000000000 00000011 11111111111100 01111111110 01123456789
Q ss_pred CccEEEEeeCCCCccChHHH-----HHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 316 SVPFFVLHGTGDKVTDPLAS-----QDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 316 ~~P~lii~G~~D~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
++|+|+++|++|.++|++.. ..+.+.+++ .++++++++||+++.| +++++++.|.+||++.
T Consensus 292 ~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~--~~l~~i~~aGH~~~~E-~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 292 SLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN--VTLYVLEGVGHCPHDD-RPDLVHEKLLPWLAQL 357 (360)
T ss_pred CCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc--eEEEEcCCCCCCcccc-CHHHHHHHHHHHHHhc
Confidence 99999999999999988642 233344444 8999999999999888 9999999999999863
No 15
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=1.4e-29 Score=217.75 Aligned_cols=237 Identities=16% Similarity=0.172 Sum_probs=157.8
Q ss_pred EEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEech
Q 016589 125 ILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHST 204 (386)
Q Consensus 125 ~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~ 204 (386)
.|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.+....++++++++|+.++++.+... ++++++||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~---~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD---HKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC---CCEEEEecCc
Confidence 5999999999999999999999888999999999999999865544468999999999999987542 2699999999
Q ss_pred hhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccc--cCCCCCCC-CCCCCHHHHHH
Q 016589 205 GGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQF--KGANKRGV-PVSRDPAALLA 281 (386)
Q Consensus 205 Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~ 281 (386)
||.+++. ++.++|+ +|+++|++++.......... ................ ........ ......+....
T Consensus 82 GG~ia~~----~a~~~p~---~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PLN02965 82 GGGSVTE----ALCKFTD---KISMAIYVAAAMVKPGSIIS-PRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRH 153 (255)
T ss_pred chHHHHH----HHHhCch---heeEEEEEccccCCCCCCcc-HHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHH
Confidence 9999999 9999999 89999999875321111100 0010000000000000 00000000 00000111101
Q ss_pred HhcCCCCc---------cCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEc
Q 016589 282 KYSDPLVY---------TGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLY 352 (386)
Q Consensus 282 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 352 (386)
.+...... ......... ....++...+..+++|+++++|++|..+|++..+.+.+.+++ ++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~--a~~~~i 227 (255)
T PLN02965 154 YYYNQSPLEDYTLSSKLLRPAPVRAF----QDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP--AQTYVL 227 (255)
T ss_pred HHhcCCCHHHHHHHHHhcCCCCCcch----hhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc--ceEEEe
Confidence 10000000 000000000 000112234557899999999999999999999999999887 889999
Q ss_pred CCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 353 EGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 353 ~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
+++||+++.| +|+++.+.|.+|+++.
T Consensus 228 ~~~GH~~~~e-~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 228 EDSDHSAFFS-VPTTLFQYLLQAVSSL 253 (255)
T ss_pred cCCCCchhhc-CHHHHHHHHHHHHHHh
Confidence 9999999998 9999999999998753
No 16
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=2.9e-29 Score=228.38 Aligned_cols=262 Identities=17% Similarity=0.255 Sum_probs=170.4
Q ss_pred eEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHH-HHHHHH---hCCCeEEEeCCCCCCCCCCCCCCCCChHH
Q 016589 101 LFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQ-FARQLT---SCNFGVYAMDWIGHGGSDGLHGYVPSLDH 176 (386)
Q Consensus 101 ~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~-~~~~L~---~~G~~vi~~D~~G~G~S~~~~~~~~~~~~ 176 (386)
.+.+.+|.+++|...+|.++..+|+|||+||++++...|.. +...|. +.+|+|+++|+||||.|+.+....+++++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 45566778999999998765557899999999999999985 446665 36899999999999999876544568899
Q ss_pred HHHHHH-HHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhh
Q 016589 177 VVADTG-AFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSL 255 (386)
Q Consensus 177 ~~~d~~-~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 255 (386)
+++++. .+++.++.+ +++++||||||.+++. +|.++|+ +|+++|+++|.....+.... ........
T Consensus 259 ~a~~l~~~ll~~lg~~----k~~LVGhSmGG~iAl~----~A~~~Pe---~V~~LVLi~~~~~~~~~~~~--~~~~~~~~ 325 (481)
T PLN03087 259 HLEMIERSVLERYKVK----SFHIVAHSLGCILALA----LAVKHPG---AVKSLTLLAPPYYPVPKGVQ--ATQYVMRK 325 (481)
T ss_pred HHHHHHHHHHHHcCCC----CEEEEEECHHHHHHHH----HHHhChH---hccEEEEECCCccccccchh--HHHHHHHH
Confidence 898884 677766543 5999999999999999 9999999 89999999876543322110 00000000
Q ss_pred hcCCcccc-----CCC--------CC-CCCCCCCHHHHH---HHhcCCCCc----------cCCcchhHHHHHHH-----
Q 016589 256 VVPKYQFK-----GAN--------KR-GVPVSRDPAALL---AKYSDPLVY----------TGPIRVRTGHEILR----- 303 (386)
Q Consensus 256 ~~~~~~~~-----~~~--------~~-~~~~~~~~~~~~---~~~~~~~~~----------~~~~~~~~~~~~~~----- 303 (386)
......+. ... .. .......+.... ......... ...........+..
T Consensus 326 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~ 405 (481)
T PLN03087 326 VAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSK 405 (481)
T ss_pred hcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhh
Confidence 00000000 000 00 000000000000 000000000 00000000000010
Q ss_pred HHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccC-CccHHHHHHHHHHHHhh
Q 016589 304 LSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLF-ELERDEVAQDIIVWLEK 378 (386)
Q Consensus 304 ~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~i~~fl~~ 378 (386)
....+.....++++|+|+++|++|.++|++..+.+.+.+++ +++++++++||..+. + +++++++.|.+|.+.
T Consensus 406 l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~--a~l~vI~~aGH~~~v~e-~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 406 LDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPR--ARVKVIDDKDHITIVVG-RQKEFARELEEIWRR 478 (481)
T ss_pred hhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCcchhhc-CHHHHHHHHHHHhhc
Confidence 01112223346899999999999999999999999999876 999999999999886 6 899999999999864
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=2.9e-29 Score=216.31 Aligned_cols=249 Identities=16% Similarity=0.147 Sum_probs=163.2
Q ss_pred eEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 016589 109 ALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKI 188 (386)
Q Consensus 109 ~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l 188 (386)
+++|+.+.+.+...+|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..+.. ++++++++|+.++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~l 78 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDAL 78 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHHc
Confidence 4567776666556689999999999999999999999965 59999999999999987554 48999999999999987
Q ss_pred HHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCC--
Q 016589 189 KLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGAN-- 266 (386)
Q Consensus 189 ~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 266 (386)
... +++++||||||.+++. +|.++|+ +|+++|++++.............. ......... ......
T Consensus 79 ~~~----~~~lvGhS~Gg~va~~----~a~~~~~---~v~~lvli~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~ 145 (255)
T PRK10673 79 QIE----KATFIGHSMGGKAVMA----LTALAPD---RIDKLVAIDIAPVDYHVRRHDEIF-AAINAVSEA-GATTRQQA 145 (255)
T ss_pred CCC----ceEEEEECHHHHHHHH----HHHhCHh---hcceEEEEecCCCCccchhhHHHH-HHHHHhhhc-ccccHHHH
Confidence 543 5999999999999999 9999998 899999986432211100000000 000000000 000000
Q ss_pred CCCCCCCCCHHHHHHHhcCCCCccCCcc--hhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhc
Q 016589 267 KRGVPVSRDPAALLAKYSDPLVYTGPIR--VRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAAS 344 (386)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~ 344 (386)
...................... ..... .......+... ...+.++.+++|+|+++|++|..++++..+.+.+.+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 223 (255)
T PRK10673 146 AAIMRQHLNEEGVIQFLLKSFV-DGEWRFNVPVLWDQYPHI-VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ 223 (255)
T ss_pred HHHHHHhcCCHHHHHHHHhcCC-cceeEeeHHHHHHhHHHH-hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC
Confidence 0000000000111111111000 00000 00000111100 01234667899999999999999999988888888766
Q ss_pred CCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 345 RFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 345 ~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
.++++++++||+.+.+ +++++.+.|.+||++
T Consensus 224 --~~~~~~~~~gH~~~~~-~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 224 --ARAHVIAGAGHWVHAE-KPDAVLRAIRRYLND 254 (255)
T ss_pred --cEEEEeCCCCCeeecc-CHHHHHHHHHHHHhc
Confidence 8999999999998887 899999999999975
No 18
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=5.9e-29 Score=217.29 Aligned_cols=263 Identities=20% Similarity=0.220 Sum_probs=173.4
Q ss_pred CccccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 016589 94 PCRWSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPS 173 (386)
Q Consensus 94 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~ 173 (386)
|+.+....++..+|.+++|...++.+ .|+|||+||++++...|..+.+.|++ +|+|+++|+||||.|+.+....++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~ 77 (278)
T TIGR03056 2 WPHRDCSRRVTVGPFHWHVQDMGPTA---GPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFT 77 (278)
T ss_pred CCCCCccceeeECCEEEEEEecCCCC---CCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCC
Confidence 34556677788899999998876532 47999999999999999999999966 599999999999999876654568
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCc--hhhhHhh
Q 016589 174 LDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHP--IVGAVAP 251 (386)
Q Consensus 174 ~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~--~~~~~~~ 251 (386)
++.+++|+.++++.+..+ +++++||||||.+++. +|.++|+ +++++|++++......... .......
T Consensus 78 ~~~~~~~l~~~i~~~~~~----~~~lvG~S~Gg~~a~~----~a~~~p~---~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 146 (278)
T TIGR03056 78 LPSMAEDLSALCAAEGLS----PDGVIGHSAGAAIALR----LALDGPV---TPRMVVGINAALMPFEGMAGTLFPYMAR 146 (278)
T ss_pred HHHHHHHHHHHHHHcCCC----CceEEEECccHHHHHH----HHHhCCc---ccceEEEEcCcccccccccccccchhhH
Confidence 999999999999876533 5899999999999999 9999998 8999999887654221100 0000000
Q ss_pred hhh------hhcCCcccc-CCCCCCC---CCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHH--HHHHHhhccCCCccE
Q 016589 252 LFS------LVVPKYQFK-GANKRGV---PVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRL--SSYLKRNFKSVSVPF 319 (386)
Q Consensus 252 ~~~------~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~ 319 (386)
... ......... ....... .....+.. ...+.+... .............. .......++++++|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 223 (278)
T TIGR03056 147 VLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAG-MTYYGRLIR--SPAHVDGALSMMAQWDLAPLNRDLPRITIPL 223 (278)
T ss_pred hhhhcccchHHHHhhcccCcchhHHhhccccccccch-hhHHHHhhc--CchhhhHHHHHhhcccccchhhhcccCCCCE
Confidence 000 000000000 0000000 00000000 000000000 00000000000000 011234567889999
Q ss_pred EEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 320 FVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 320 lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
++++|++|.++|++..+.+.+.+++ .+++.++++||+++.+ .++++.+.|.+|++
T Consensus 224 lii~g~~D~~vp~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e-~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 224 HLIAGEEDKAVPPDESKRAATRVPT--ATLHVVPGGGHLVHEE-QADGVVGLILQAAE 278 (278)
T ss_pred EEEEeCCCcccCHHHHHHHHHhccC--CeEEEECCCCCccccc-CHHHHHHHHHHHhC
Confidence 9999999999999999888887765 8899999999998888 89999999999984
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=8.1e-29 Score=213.68 Aligned_cols=251 Identities=20% Similarity=0.233 Sum_probs=163.5
Q ss_pred EEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 016589 110 LFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIK 189 (386)
Q Consensus 110 l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~ 189 (386)
++|..+++.. .+.|+||++||++++...|..+++.|.+ +|+|+++|+||||.|+.+....++++++++|+.++++.++
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC
Confidence 4677777533 3468999999999999999999988864 6999999999999998765555689999999999998875
Q ss_pred HhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCch-hhhHhhhhhhhcCCccccC---C
Q 016589 190 LENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPI-VGAVAPLFSLVVPKYQFKG---A 265 (386)
Q Consensus 190 ~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~ 265 (386)
.. +++++||||||.+++. +++++|+ +++++|++++.......... ................... .
T Consensus 79 ~~----~~~l~G~S~Gg~~a~~----~a~~~~~---~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (257)
T TIGR03611 79 IE----RFHFVGHALGGLIGLQ----LALRYPE---RLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALF 147 (257)
T ss_pred CC----cEEEEEechhHHHHHH----HHHHChH---HhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhh
Confidence 43 5999999999999999 9999998 89999999876543221110 0000000000000000000 0
Q ss_pred CCCCCCCCCCHHHHHHHhcCCCC-ccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhc
Q 016589 266 NKRGVPVSRDPAALLAKYSDPLV-YTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAAS 344 (386)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~ 344 (386)
....................... ............... ..+....+.++++|+++++|++|.++|++.++++.+.+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 226 (257)
T TIGR03611 148 LYPADWISENAARLAADEAHALAHFPGKANVLRRINALE-AFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPN 226 (257)
T ss_pred hccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHH-cCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCC
Confidence 00000000000000000000000 000000000000000 1112355778899999999999999999999999888765
Q ss_pred CCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 345 RFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 345 ~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
.+++.++++||++..+ +++++.+.|.+||+
T Consensus 227 --~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 227 --AQLKLLPYGGHASNVT-DPETFNRALLDFLK 256 (257)
T ss_pred --ceEEEECCCCCCcccc-CHHHHHHHHHHHhc
Confidence 7899999999998887 99999999999986
No 20
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.96 E-value=3.5e-28 Score=190.02 Aligned_cols=229 Identities=22% Similarity=0.308 Sum_probs=177.3
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGH 202 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGh 202 (386)
+-.||++||+.|+....+.+.+.|.++||.|.+|.|||||.....- -..+.+++.+|+.+..+.|.... ...|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f-l~t~~~DW~~~v~d~Y~~L~~~g-y~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF-LKTTPRDWWEDVEDGYRDLKEAG-YDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH-hcCCHHHHHHHHHHHHHHHHHcC-CCeEEEEee
Confidence 3699999999999999999999999999999999999999765321 12488999999999999998543 456999999
Q ss_pred chhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHH
Q 016589 203 STGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAK 282 (386)
Q Consensus 203 S~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (386)
||||.+++. +|..+| ++++|.+|++............+...+..... ....+.+.....
T Consensus 93 SmGGv~alk----la~~~p-----~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk------------~e~k~~e~~~~e 151 (243)
T COG1647 93 SMGGVFALK----LAYHYP-----PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKK------------YEGKDQEQIDKE 151 (243)
T ss_pred cchhHHHHH----HHhhCC-----ccceeeecCCcccccchhhhHHHHHHHHHhhh------------ccCCCHHHHHHH
Confidence 999999999 899988 78999999888766555444444433321111 011223333322
Q ss_pred hcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCC
Q 016589 283 YSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFE 362 (386)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 362 (386)
+... .........++.....+..+.+..|..|++++.|.+|+++|.+.+..+++...+.++++.+++++||.+..+
T Consensus 152 ~~~~----~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D 227 (243)
T COG1647 152 MKSY----KDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLD 227 (243)
T ss_pred HHHh----hcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecc
Confidence 2211 111223344455555667888899999999999999999999999999999988889999999999999988
Q ss_pred ccHHHHHHHHHHHHhh
Q 016589 363 LERDEVAQDIIVWLEK 378 (386)
Q Consensus 363 ~~~~~~~~~i~~fl~~ 378 (386)
.+.+++.+.+..||++
T Consensus 228 ~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 228 KERDQVEEDVITFLEK 243 (243)
T ss_pred hhHHHHHHHHHHHhhC
Confidence 8899999999999963
No 21
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=8.4e-28 Score=209.74 Aligned_cols=255 Identities=18% Similarity=0.224 Sum_probs=161.8
Q ss_pred eEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHH
Q 016589 101 LFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVAD 180 (386)
Q Consensus 101 ~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d 180 (386)
.+...+|.+++|...+. +|+|||+||++.+...|..+.+.|.+ +|+|+++|+||||.|+.+....++.++++++
T Consensus 17 ~~~~~~~~~i~y~~~G~-----~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 90 (286)
T PRK03204 17 RWFDSSRGRIHYIDEGT-----GPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARV 90 (286)
T ss_pred eEEEcCCcEEEEEECCC-----CCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHHHHHHH
Confidence 45556888999888652 47899999999988899999999965 5999999999999998765444578888899
Q ss_pred HHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhh------
Q 016589 181 TGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFS------ 254 (386)
Q Consensus 181 ~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~------ 254 (386)
+.++++++..+ +++++||||||.+++. ++..+|+ +|+++|++++......... .........
T Consensus 91 ~~~~~~~~~~~----~~~lvG~S~Gg~va~~----~a~~~p~---~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 158 (286)
T PRK03204 91 IGEFVDHLGLD----RYLSMGQDWGGPISMA----VAVERAD---RVRGVVLGNTWFWPADTLA-MKAFSRVMSSPPVQY 158 (286)
T ss_pred HHHHHHHhCCC----CEEEEEECccHHHHHH----HHHhChh---heeEEEEECccccCCCchh-HHHHHHHhccccchh
Confidence 98888876543 5999999999999999 9999999 8999999877542211100 000000000
Q ss_pred hhc-CCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcc-hhHHHHHH-HH---HHHHHhhccC--CCccEEEEeeCC
Q 016589 255 LVV-PKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIR-VRTGHEIL-RL---SSYLKRNFKS--VSVPFFVLHGTG 326 (386)
Q Consensus 255 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~---~~~~~~~~~~--i~~P~lii~G~~ 326 (386)
... ...................+.. ..+........... .......+ .. ...+...+.. +++|+++|+|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~ 237 (286)
T PRK03204 159 AILRRNFFVERLIPAGTEHRPSSAVM-AHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMK 237 (286)
T ss_pred hhhhhhHHHHHhccccccCCCCHHHH-HHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCC
Confidence 000 0000000000000001111111 12211111100000 00000000 00 0111111222 289999999999
Q ss_pred CCccChH-HHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 327 DKVTDPL-ASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 327 D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
|.++++. ..+.+.+.+++ .++++++++||+++.| +|+++.+.|.+|+.
T Consensus 238 D~~~~~~~~~~~~~~~ip~--~~~~~i~~aGH~~~~e-~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 238 DVAFRPKTILPRLRATFPD--HVLVELPNAKHFIQED-APDRIAAAIIERFG 286 (286)
T ss_pred CcccCcHHHHHHHHHhcCC--CeEEEcCCCccccccc-CHHHHHHHHHHhcC
Confidence 9988655 46777787776 8999999999999998 99999999999973
No 22
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=2.7e-27 Score=211.64 Aligned_cols=258 Identities=19% Similarity=0.226 Sum_probs=171.1
Q ss_pred eeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC---CCCChHH
Q 016589 100 SLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG---YVPSLDH 176 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~ 176 (386)
......+|.+++|...++. .+|+|||+||++.+...|+.++..|++ +|+|+++|+||||.|+.+.. ..+++++
T Consensus 107 ~~~~~~~~~~~~y~~~G~~---~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~ 182 (383)
T PLN03084 107 QSQASSDLFRWFCVESGSN---NNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDE 182 (383)
T ss_pred eeEEcCCceEEEEEecCCC---CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHH
Confidence 3445688999999987653 247999999999999999999999975 69999999999999987643 2468999
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCC-Cc-hhhhHhh-hh
Q 016589 177 VVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPA-HP-IVGAVAP-LF 253 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~-~~-~~~~~~~-~~ 253 (386)
+++|+.++++.+..+ +++++|||+||.+++. +|.++|+ +|+++|+++|....... .+ ....+.. ..
T Consensus 183 ~a~~l~~~i~~l~~~----~~~LvG~s~GG~ia~~----~a~~~P~---~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~ 251 (383)
T PLN03084 183 YVSSLESLIDELKSD----KVSLVVQGYFSPPVVK----YASAHPD---KIKKLILLNPPLTKEHAKLPSTLSEFSNFLL 251 (383)
T ss_pred HHHHHHHHHHHhCCC----CceEEEECHHHHHHHH----HHHhChH---hhcEEEEECCCCccccccchHHHHHHHHHHh
Confidence 999999999998764 4999999999999999 9999999 89999999987543211 01 0000100 00
Q ss_pred hhhcCCcccc---CCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHH--------HHHHhhc--cCCCccEE
Q 016589 254 SLVVPKYQFK---GANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLS--------SYLKRNF--KSVSVPFF 320 (386)
Q Consensus 254 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~~i~~P~l 320 (386)
..+....... ........... .+.....+..+.......... .....+.. ..+...+ .++++|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~-l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvL 329 (383)
T PLN03084 252 GEIFSQDPLRASDKALTSCGPYAM-KEDDAMVYRRPYLTSGSSGFA-LNAISRSMKKELKKYIEEMRSILTDKNWKTPIT 329 (383)
T ss_pred hhhhhcchHHHHhhhhcccCccCC-CHHHHHHHhccccCCcchHHH-HHHHHHHhhcccchhhHHHHhhhccccCCCCEE
Confidence 0000000000 00000000001 112222222222211111000 00011110 1111111 45799999
Q ss_pred EEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 321 VLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 321 ii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
+++|++|.+++.+..+++.+.. +.+++++|++||+++.| .++++++.|.+|+.+
T Consensus 330 iI~G~~D~~v~~~~~~~~a~~~---~a~l~vIp~aGH~~~~E-~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 330 VCWGLRDRWLNYDGVEDFCKSS---QHKLIELPMAGHHVQED-CGEELGGIISGILSK 383 (383)
T ss_pred EEeeCCCCCcCHHHHHHHHHhc---CCeEEEECCCCCCcchh-CHHHHHHHHHHHhhC
Confidence 9999999999999888877763 37899999999999888 999999999999863
No 23
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.96 E-value=3.7e-28 Score=212.63 Aligned_cols=247 Identities=15% Similarity=0.166 Sum_probs=154.5
Q ss_pred CceEEEEEecCCCCCCceEEEEECCCCCChhhHHH---HHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 016589 107 RNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQ---FARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGA 183 (386)
Q Consensus 107 g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~ 183 (386)
|.+++|...+ ..|+||++||++.+...|.. .+..|.+.||+|+++|+||||.|+.+..........++|+.+
T Consensus 19 ~~~~~y~~~g-----~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ 93 (282)
T TIGR03343 19 NFRIHYNEAG-----NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG 93 (282)
T ss_pred ceeEEEEecC-----CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHH
Confidence 4557777643 23689999999988777754 345666778999999999999998653221122245788888
Q ss_pred HHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCC-ch-hhhHhhhhhhhcCCc-
Q 016589 184 FLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAH-PI-VGAVAPLFSLVVPKY- 260 (386)
Q Consensus 184 ~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~-~~-~~~~~~~~~~~~~~~- 260 (386)
+++.+..+ +++++||||||.+++. +|.++|+ +++++|+++|........ .. ...............
T Consensus 94 ~l~~l~~~----~~~lvG~S~Gg~ia~~----~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T TIGR03343 94 LMDALDIE----KAHLVGNSMGGATALN----FALEYPD---RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSY 162 (282)
T ss_pred HHHHcCCC----CeeEEEECchHHHHHH----HHHhChH---hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCH
Confidence 88887554 5999999999999999 9999999 899999998753211100 00 000001110000000
Q ss_pred -cccCCCC-CCC-CCCCCHHHHHHHhcCCCCccCCcchhHHHHHHH-------HHHHHHhhccCCCccEEEEeeCCCCcc
Q 016589 261 -QFKGANK-RGV-PVSRDPAALLAKYSDPLVYTGPIRVRTGHEILR-------LSSYLKRNFKSVSVPFFVLHGTGDKVT 330 (386)
Q Consensus 261 -~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~P~lii~G~~D~~v 330 (386)
....... ... ............+....... ........ ...+....++++++|+|+++|++|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v 237 (282)
T TIGR03343 163 ETLKQMLNVFLFDQSLITEELLQGRWENIQRQP-----EHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFV 237 (282)
T ss_pred HHHHHHHhhCccCcccCcHHHHHhHHHHhhcCH-----HHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcC
Confidence 0000000 000 00001110000000000000 00000000 011124457789999999999999999
Q ss_pred ChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 331 DPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
+++.++++.+.+++ .++++++++||+.+.| +++.+.+.|.+|++
T Consensus 238 ~~~~~~~~~~~~~~--~~~~~i~~agH~~~~e-~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 238 PLDHGLKLLWNMPD--AQLHVFSRCGHWAQWE-HADAFNRLVIDFLR 281 (282)
T ss_pred CchhHHHHHHhCCC--CEEEEeCCCCcCCccc-CHHHHHHHHHHHhh
Confidence 99999999888876 9999999999999888 99999999999986
No 24
>PRK06489 hypothetical protein; Provisional
Probab=99.96 E-value=4.8e-27 Score=211.72 Aligned_cols=257 Identities=12% Similarity=0.136 Sum_probs=158.8
Q ss_pred cCCceEEEEEecCCCC----CCceEEEEECCCCCChhhHH--HHHHHH-------HhCCCeEEEeCCCCCCCCCCCCCC-
Q 016589 105 VKRNALFCRSWIPVSG----ELKGILIIIHGLNEHSGRYA--QFARQL-------TSCNFGVYAMDWIGHGGSDGLHGY- 170 (386)
Q Consensus 105 ~~g~~l~~~~~~p~~~----~~~p~vv~lHG~~~~~~~~~--~~~~~L-------~~~G~~vi~~D~~G~G~S~~~~~~- 170 (386)
.+|.+++|..+++... ...|+|||+||++++...|. .+.+.| ..++|+|+++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 5688899998875320 11578999999999988875 555554 145799999999999999865321
Q ss_pred -----CCChHHHHHHHHHHH-HHHHHhCCCCCEE-EEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCC
Q 016589 171 -----VPSLDHVVADTGAFL-EKIKLENPTVPCF-LFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAH 243 (386)
Q Consensus 171 -----~~~~~~~~~d~~~~l-~~l~~~~~~~~i~-lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~ 243 (386)
.++++++++|+.+++ ++++.+ +++ ++||||||++++. +|.++|+ +|+++|++++........
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~----~~~~lvG~SmGG~vAl~----~A~~~P~---~V~~LVLi~s~~~~~~~~ 195 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVK----HLRLILGTSMGGMHAWM----WGEKYPD---FMDALMPMASQPTEMSGR 195 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCC----ceeEEEEECHHHHHHHH----HHHhCch---hhheeeeeccCcccccHH
Confidence 357888888887754 655543 364 8999999999999 9999999 899999988753211110
Q ss_pred ch-h-hhHhhhhhhhcCCccccCCCCCC--------------------C-CCCCCH---HHHHHHhcCCCCccCCcchhH
Q 016589 244 PI-V-GAVAPLFSLVVPKYQFKGANKRG--------------------V-PVSRDP---AALLAKYSDPLVYTGPIRVRT 297 (386)
Q Consensus 244 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~--------------------~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 297 (386)
.. . ......... ............. . ...... ............. .....
T Consensus 196 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 271 (360)
T PRK06489 196 NWMWRRMLIESIRN-DPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVT---ADAND 271 (360)
T ss_pred HHHHHHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhh---cCHHH
Confidence 00 0 000000000 0000000000000 0 000000 0000000000000 00000
Q ss_pred HHHHHHH--HHHHHhhccCCCccEEEEeeCCCCccChHHH--HHHHHHhhcCCCcEEEcCCC----CCcccCCccHHHHH
Q 016589 298 GHEILRL--SSYLKRNFKSVSVPFFVLHGTGDKVTDPLAS--QDLYNEAASRFKDIKLYEGL----LHDLLFELERDEVA 369 (386)
Q Consensus 298 ~~~~~~~--~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~ 369 (386)
....... ..+..+.+++|++|+|+|+|++|.++|++.. +.+.+.+++ .+++++|++ ||..+ + +|+++.
T Consensus 272 ~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~--a~l~~i~~a~~~~GH~~~-e-~P~~~~ 347 (360)
T PRK06489 272 FLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH--GRLVLIPASPETRGHGTT-G-SAKFWK 347 (360)
T ss_pred HHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC--CeEEEECCCCCCCCcccc-c-CHHHHH
Confidence 0001111 1123556788999999999999999998875 677777766 899999996 99886 6 999999
Q ss_pred HHHHHHHhhhh
Q 016589 370 QDIIVWLEKKL 380 (386)
Q Consensus 370 ~~i~~fl~~~~ 380 (386)
+.|.+|+++.-
T Consensus 348 ~~i~~FL~~~~ 358 (360)
T PRK06489 348 AYLAEFLAQVP 358 (360)
T ss_pred HHHHHHHHhcc
Confidence 99999998653
No 25
>PLN02578 hydrolase
Probab=99.96 E-value=4.5e-27 Score=211.24 Aligned_cols=253 Identities=19% Similarity=0.247 Sum_probs=165.3
Q ss_pred eEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHH
Q 016589 101 LFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVAD 180 (386)
Q Consensus 101 ~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d 180 (386)
.+.+.+|.+++|...+. +|+||++||++++...|..+++.|++ +|+|+++|+||||.|+.+.. .++.+.+++|
T Consensus 69 ~~~~~~~~~i~Y~~~g~-----g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~ 141 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGE-----GLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALI-EYDAMVWRDQ 141 (354)
T ss_pred eEEEECCEEEEEEEcCC-----CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCccc-ccCHHHHHHH
Confidence 44456788898887542 36799999999999999999999965 59999999999999987643 3588888999
Q ss_pred HHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCc-----------hhh--
Q 016589 181 TGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHP-----------IVG-- 247 (386)
Q Consensus 181 ~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~-----------~~~-- 247 (386)
+.++++.+..+ +++++|||+||.+++. +|.++|+ +++++|++++......... ...
T Consensus 142 l~~~i~~~~~~----~~~lvG~S~Gg~ia~~----~A~~~p~---~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (354)
T PLN02578 142 VADFVKEVVKE----PAVLVGNSLGGFTALS----TAVGYPE---LVAGVALLNSAGQFGSESREKEEAIVVEETVLTRF 210 (354)
T ss_pred HHHHHHHhccC----CeEEEEECHHHHHHHH----HHHhChH---hcceEEEECCCccccccccccccccccccchhhHH
Confidence 99999988643 5999999999999999 9999999 8999999876543221100 000
Q ss_pred ---hHhhhhhhhcCCccccCCC---------C-CCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHH------HHHH
Q 016589 248 ---AVAPLFSLVVPKYQFKGAN---------K-RGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRL------SSYL 308 (386)
Q Consensus 248 ---~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 308 (386)
..............+.... . .........+........+..... ........... ....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 288 (354)
T PLN02578 211 VVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPN--AGEVYYRLMSRFLFNQSRYTL 288 (354)
T ss_pred HhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCc--hHHHHHHHHHHHhcCCCCCCH
Confidence 0000000000000000000 0 000000000111111111100000 00011111100 0113
Q ss_pred HhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 309 KRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 309 ~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
.+.++++++|+++++|++|.++|.+.++.+.+.+++ .+++++ ++||+++.| +++++.+.|.+|++
T Consensus 289 ~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~--a~l~~i-~~GH~~~~e-~p~~~~~~I~~fl~ 353 (354)
T PLN02578 289 DSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD--TTLVNL-QAGHCPHDE-VPEQVNKALLEWLS 353 (354)
T ss_pred HHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEe-CCCCCcccc-CHHHHHHHHHHHHh
Confidence 455688999999999999999999999998888866 788888 589999888 99999999999986
No 26
>PRK13604 luxD acyl transferase; Provisional
Probab=99.95 E-value=9.1e-27 Score=197.59 Aligned_cols=231 Identities=13% Similarity=0.100 Sum_probs=158.4
Q ss_pred ccceeEeccCCceEEEEEecCCC--CCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCC-CCCCCCCCCCCC
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVS--GELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGH-GGSDGLHGYVPS 173 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~--~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~~~~~ 173 (386)
...+.+...||.+|..+...|.+ ..+.++||++||++++...+..+++.|+++||.|+.+|+||+ |.|++..... +
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~-t 87 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF-T 87 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC-c
Confidence 34567788899999999998863 356789999999999887899999999999999999999988 8997654322 4
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhh
Q 016589 174 LDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLF 253 (386)
Q Consensus 174 ~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 253 (386)
......|+.+++++++... ..+++++||||||.+++. ++..+ .++++|+.+|+.+... .+....
T Consensus 88 ~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~-----~A~~~----~v~~lI~~sp~~~l~d------~l~~~~ 151 (307)
T PRK13604 88 MSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYE-----VINEI----DLSFLITAVGVVNLRD------TLERAL 151 (307)
T ss_pred ccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHH-----HhcCC----CCCEEEEcCCcccHHH------HHHHhh
Confidence 4445799999999998754 458999999999999977 44444 3888999999876431 111100
Q ss_pred hhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcc-hhHHHHHHHH----HHHHHhhccCCCccEEEEeeCCCC
Q 016589 254 SLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIR-VRTGHEILRL----SSYLKRNFKSVSVPFFVLHGTGDK 328 (386)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~i~~P~lii~G~~D~ 328 (386)
......+.... .+... ........ ........+. .....+.+++++.|+|+|||++|.
T Consensus 152 ~~~~~~~p~~~----------lp~~~-------d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~ 214 (307)
T PRK13604 152 GYDYLSLPIDE----------LPEDL-------DFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDS 214 (307)
T ss_pred hcccccCcccc----------ccccc-------ccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCC
Confidence 00000000000 00000 00000000 0000000000 011234566788999999999999
Q ss_pred ccChHHHHHHHHHhhcCCCcEEEcCCCCCcccC
Q 016589 329 VTDPLASQDLYNEAASRFKDIKLYEGLLHDLLF 361 (386)
Q Consensus 329 ~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 361 (386)
+||++.++++++.+++.+++++++||++|.+..
T Consensus 215 lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 215 WVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred ccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 999999999999987667999999999997653
No 27
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.95 E-value=2.8e-27 Score=203.88 Aligned_cols=242 Identities=17% Similarity=0.189 Sum_probs=151.1
Q ss_pred EEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 016589 110 LFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIK 189 (386)
Q Consensus 110 l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~ 189 (386)
++|..++ ++.|+|||+||++++...|..+.+.|.+. |+|+++|+||||.|+.... ++.++.++++.+ +.
T Consensus 4 ~~y~~~G----~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~--~~~~~~~~~l~~----~~ 72 (256)
T PRK10349 4 IWWQTKG----QGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFGA--LSLADMAEAVLQ----QA 72 (256)
T ss_pred cchhhcC----CCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCCC--CCHHHHHHHHHh----cC
Confidence 4555543 22357999999999999999999999765 9999999999999976432 366666665543 22
Q ss_pred HhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCC--Cch--hhhHhhhhhhhcCCcc--cc
Q 016589 190 LENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPA--HPI--VGAVAPLFSLVVPKYQ--FK 263 (386)
Q Consensus 190 ~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~--~~~--~~~~~~~~~~~~~~~~--~~ 263 (386)
.++++++||||||.+++. +|.++|+ +++++|++++....... ... ..........+..... ..
T Consensus 73 ----~~~~~lvGhS~Gg~ia~~----~a~~~p~---~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (256)
T PRK10349 73 ----PDKAIWLGWSLGGLVASQ----IALTHPE---RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVE 141 (256)
T ss_pred ----CCCeEEEEECHHHHHHHH----HHHhChH---hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHH
Confidence 236999999999999999 9999999 89999998875332111 000 0011111000000000 00
Q ss_pred CCCCC-CCCCCCCHHHHHHHhcC--CCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHH
Q 016589 264 GANKR-GVPVSRDPAALLAKYSD--PLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYN 340 (386)
Q Consensus 264 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~ 340 (386)
..... ................. ..............+... ..+..+.+.++++|+|+++|++|.++|.+..+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 220 (256)
T PRK10349 142 RFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDK 220 (256)
T ss_pred HHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHH-hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHH
Confidence 00000 00000000111100000 000000000011111111 123456678899999999999999999998888888
Q ss_pred HhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 341 EAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
.+++ .+++++|++||+++.| +|+++.+.+.+|-.
T Consensus 221 ~i~~--~~~~~i~~~gH~~~~e-~p~~f~~~l~~~~~ 254 (256)
T PRK10349 221 LWPH--SESYIFAKAAHAPFIS-HPAEFCHLLVALKQ 254 (256)
T ss_pred hCCC--CeEEEeCCCCCCcccc-CHHHHHHHHHHHhc
Confidence 8766 8999999999999998 99999999999864
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.95 E-value=6.8e-28 Score=206.87 Aligned_cols=246 Identities=20% Similarity=0.250 Sum_probs=159.4
Q ss_pred EEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 016589 110 LFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIK 189 (386)
Q Consensus 110 l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~ 189 (386)
++|..+++. +.+|+||++||++.+...|..+++.|. .||+|+++|+||||.|+.+.. .++++++++|+.++++.+.
T Consensus 2 ~~~~~~g~~--~~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 2 LHYRLDGAA--DGAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDHLG 77 (251)
T ss_pred ceEEeecCC--CCCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhC
Confidence 566666543 246899999999999999999999985 579999999999999975543 3588999999999998875
Q ss_pred HhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhh----hhhhcCCccccCC
Q 016589 190 LENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPL----FSLVVPKYQFKGA 265 (386)
Q Consensus 190 ~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 265 (386)
.+ +++++|||+||.+++. +|.++|+ +++++|++++................. .............
T Consensus 78 ~~----~v~liG~S~Gg~~a~~----~a~~~p~---~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (251)
T TIGR02427 78 IE----RAVFCGLSLGGLIAQG----LAARRPD---RVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWF 146 (251)
T ss_pred CC----ceEEEEeCchHHHHHH----HHHHCHH---HhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHc
Confidence 43 5999999999999999 8999998 899999988764332211111000000 0000000000000
Q ss_pred CCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcC
Q 016589 266 NKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASR 345 (386)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~ 345 (386)
... .. ......... +................... ...+....++++++|+++++|++|.++|.+....+.+.+++
T Consensus 147 ~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~- 221 (251)
T TIGR02427 147 TPG-FR-EAHPARLDL-YRNMLVRQPPDGYAGCCAAI-RDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG- 221 (251)
T ss_pred ccc-cc-cCChHHHHH-HHHHHHhcCHHHHHHHHHHH-hcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC-
Confidence 000 00 000110000 00000000000000000000 01123455678899999999999999999988888888765
Q ss_pred CCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 346 FKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 346 ~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
.++++++++||+.+.+ +++++.+.|.+|++
T Consensus 222 -~~~~~~~~~gH~~~~~-~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 222 -ARFAEIRGAGHIPCVE-QPEAFNAALRDFLR 251 (251)
T ss_pred -ceEEEECCCCCccccc-ChHHHHHHHHHHhC
Confidence 7899999999999888 89999999999974
No 29
>PRK07581 hypothetical protein; Validated
Probab=99.95 E-value=3.9e-27 Score=211.10 Aligned_cols=261 Identities=13% Similarity=0.094 Sum_probs=159.7
Q ss_pred cCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHH---HHHHhCCCeEEEeCCCCCCCCCCCCC--CCCChH----
Q 016589 105 VKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFA---RQLTSCNFGVYAMDWIGHGGSDGLHG--YVPSLD---- 175 (386)
Q Consensus 105 ~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~---~~L~~~G~~vi~~D~~G~G~S~~~~~--~~~~~~---- 175 (386)
.+|.+++|..+++...++.|+||++||++++...|..++ +.|...+|+|+++|+||||.|+.+.. ..++++
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 467889999988643334577888888887777776554 46755679999999999999976532 122333
Q ss_pred -HHHHHHHH----HHHHHHHhCCCCCE-EEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhH
Q 016589 176 -HVVADTGA----FLEKIKLENPTVPC-FLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAV 249 (386)
Q Consensus 176 -~~~~d~~~----~l~~l~~~~~~~~i-~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~ 249 (386)
...+|+.+ ++++++. +++ +++||||||++|+. +|.++|+ +|+++|++++......... ...
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi----~~~~~lvG~S~GG~va~~----~a~~~P~---~V~~Lvli~~~~~~~~~~~--~~~ 169 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGI----ERLALVVGWSMGAQQTYH----WAVRYPD---MVERAAPIAGTAKTTPHNF--VFL 169 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCC----CceEEEEEeCHHHHHHHH----HHHHCHH---HHhhheeeecCCCCCHHHH--HHH
Confidence 24566665 4444544 354 79999999999999 9999999 8999999876543211000 000
Q ss_pred hhhhhhhc--CCccccCC-------------------------CCCCC-CCC-CC-HHHHHHHhcCCCCccCCcchhHHH
Q 016589 250 APLFSLVV--PKYQFKGA-------------------------NKRGV-PVS-RD-PAALLAKYSDPLVYTGPIRVRTGH 299 (386)
Q Consensus 250 ~~~~~~~~--~~~~~~~~-------------------------~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 299 (386)
......+. +.+..... ..... ... .. .+......................
T Consensus 170 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 249 (339)
T PRK07581 170 EGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAML 249 (339)
T ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHH
Confidence 00000000 00000000 00000 000 00 011111111000000000111100
Q ss_pred HHHH------H---HHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCC-CCCcccCCccHHHHH
Q 016589 300 EILR------L---SSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEG-LLHDLLFELERDEVA 369 (386)
Q Consensus 300 ~~~~------~---~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~ 369 (386)
.... . ..++...++++++|+|+|+|++|..+|++..+.+.+.+++ .+++++++ +||..+.+ +++++.
T Consensus 250 ~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~--a~l~~i~~~~GH~~~~~-~~~~~~ 326 (339)
T PRK07581 250 WTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN--AELRPIESIWGHLAGFG-QNPADI 326 (339)
T ss_pred HHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CeEEEeCCCCCcccccc-CcHHHH
Confidence 0000 0 0134566788999999999999999999999988888866 89999998 99999988 999999
Q ss_pred HHHHHHHhhhhc
Q 016589 370 QDIIVWLEKKLG 381 (386)
Q Consensus 370 ~~i~~fl~~~~~ 381 (386)
..|.+|+++.+.
T Consensus 327 ~~~~~~~~~~~~ 338 (339)
T PRK07581 327 AFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 30
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.95 E-value=1.6e-26 Score=197.69 Aligned_cols=229 Identities=22% Similarity=0.320 Sum_probs=147.0
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGH 202 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGh 202 (386)
+|+|||+||++++...|..+++.|.+ +|+|+++|+||+|.|+.... ++++++++++.+.+ ..+++++||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~--------~~~~~lvG~ 72 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQA--------PDPAIWLGW 72 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHhC--------CCCeEEEEE
Confidence 47899999999999999999999965 69999999999999876433 36666666655432 136999999
Q ss_pred chhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCC--c--h-hhhHhhhhhhhcCCcc-----ccCCCCCCCCC
Q 016589 203 STGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAH--P--I-VGAVAPLFSLVVPKYQ-----FKGANKRGVPV 272 (386)
Q Consensus 203 S~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~--~--~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 272 (386)
||||.+++. ++.++|+ +++++|++++........ . . ......+......... +..........
T Consensus 73 S~Gg~~a~~----~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (245)
T TIGR01738 73 SLGGLVALH----IAATHPD---RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPT 145 (245)
T ss_pred cHHHHHHHH----HHHHCHH---hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc
Confidence 999999999 9999998 899999987764332111 0 0 0001100000000000 00000000000
Q ss_pred CCCH-HHHHHHhcCCCCccCCcchhHHHHHHHH--HHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcE
Q 016589 273 SRDP-AALLAKYSDPLVYTGPIRVRTGHEILRL--SSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDI 349 (386)
Q Consensus 273 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~ 349 (386)
.... ......+... ...........+.. ..+....+.++++|+++++|++|.++|++..+.+.+.+++ .++
T Consensus 146 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~--~~~ 219 (245)
T TIGR01738 146 ARQDARALKQTLLAR----PTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH--SEL 219 (245)
T ss_pred cchHHHHHHHHhhcc----CCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC--CeE
Confidence 0000 0011111100 00000111111111 1123456788999999999999999999998888888765 899
Q ss_pred EEcCCCCCcccCCccHHHHHHHHHHHH
Q 016589 350 KLYEGLLHDLLFELERDEVAQDIIVWL 376 (386)
Q Consensus 350 ~~~~~~gH~~~~~~~~~~~~~~i~~fl 376 (386)
++++++||+.+.+ +++++.+.|.+|+
T Consensus 220 ~~~~~~gH~~~~e-~p~~~~~~i~~fi 245 (245)
T TIGR01738 220 YIFAKAAHAPFLS-HAEAFCALLVAFK 245 (245)
T ss_pred EEeCCCCCCcccc-CHHHHHHHHHhhC
Confidence 9999999999998 9999999999986
No 31
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.95 E-value=5.7e-27 Score=200.40 Aligned_cols=228 Identities=16% Similarity=0.169 Sum_probs=143.5
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGH 202 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGh 202 (386)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+... +++++++|+.++++.+..+ +++++||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~l~~~l~~~~~~----~~~lvG~ 73 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISVD--GFADVSRLLSQTLQSYNIL----PYWLVGY 73 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcccc--CHHHHHHHHHHHHHHcCCC----CeEEEEE
Confidence 478999999999999999999988 4 699999999999999876543 8889999999999876543 6999999
Q ss_pred chhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHh---hhhhhhcCCccc---cC-CCCCCCCCCCC
Q 016589 203 STGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVA---PLFSLVVPKYQF---KG-ANKRGVPVSRD 275 (386)
Q Consensus 203 S~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~-~~~~~~~~~~~ 275 (386)
||||.+++. +|.++|+. +|++++++++............... .....+...... .. ....... ...
T Consensus 74 S~Gg~va~~----~a~~~~~~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 146 (242)
T PRK11126 74 SLGGRIAMY----YACQGLAG--GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFA-SLN 146 (242)
T ss_pred CHHHHHHHH----HHHhCCcc--cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhh-ccC
Confidence 999999999 99998651 4999999877643321110000000 000000000000 00 0000000 000
Q ss_pred HHHHHHHhcCCCCccCCcchhHHHHHHH-----HHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEE
Q 016589 276 PAALLAKYSDPLVYTGPIRVRTGHEILR-----LSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIK 350 (386)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~ 350 (386)
................ ........ ...+..+.+.++++|+++++|++|..+. ...+. .+.+++
T Consensus 147 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~ 214 (242)
T PRK11126 147 AEQRQQLVAKRSNNNG----AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLH 214 (242)
T ss_pred ccHHHHHHHhcccCCH----HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEE
Confidence 0011000000000000 00011110 0112345678899999999999998652 22222 248999
Q ss_pred EcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 351 LYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 351 ~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
+++++||+++.| +++++.+.|.+|+++
T Consensus 215 ~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 215 VIPNAGHNAHRE-NPAAFAASLAQILRL 241 (242)
T ss_pred EeCCCCCchhhh-ChHHHHHHHHHHHhh
Confidence 999999999998 999999999999975
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.95 E-value=3.5e-26 Score=200.54 Aligned_cols=254 Identities=19% Similarity=0.200 Sum_probs=157.0
Q ss_pred EeccCCceEEEEEecCCCCCCceEEEEECCCCCChhh-HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCC--CCChHHHH
Q 016589 102 FFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGR-YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGY--VPSLDHVV 178 (386)
Q Consensus 102 ~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~--~~~~~~~~ 178 (386)
+.+.++.++.|...++. ..+++|||+||++++... |..+...+.+.||+|+++|+||||.|..+... .++.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~--~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGE--GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred eecCCCCeEEEEeccCC--CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 45566777777776543 235789999998665544 56666666666999999999999999865332 25889999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcC
Q 016589 179 ADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVP 258 (386)
Q Consensus 179 ~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 258 (386)
+|+.++++.+..+ +++++||||||.+++. ++..+|+ +++++|++++........ .........+..
T Consensus 84 ~~~~~~~~~~~~~----~~~liG~S~Gg~ia~~----~a~~~p~---~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~ 149 (288)
T TIGR01250 84 DELEEVREKLGLD----KFYLLGHSWGGMLAQE----YALKYGQ---HLKGLIISSMLDSAPEYV---KELNRLRKELPP 149 (288)
T ss_pred HHHHHHHHHcCCC----cEEEEEeehHHHHHHH----HHHhCcc---ccceeeEecccccchHHH---HHHHHHHhhcCh
Confidence 9999888877543 4999999999999999 9999998 899999988764322110 000000000000
Q ss_pred Ccc--ccCCCCCCCCCCCCHH---HHHHHhcCCCCccCCcc----------hhHHHHH-----------HHHHHHHHhhc
Q 016589 259 KYQ--FKGANKRGVPVSRDPA---ALLAKYSDPLVYTGPIR----------VRTGHEI-----------LRLSSYLKRNF 312 (386)
Q Consensus 259 ~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~~~~~-----------~~~~~~~~~~~ 312 (386)
... ........ ...++. ................. ....... .....+....+
T Consensus 150 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 227 (288)
T TIGR01250 150 EVRAAIKRCEASG--DYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKL 227 (288)
T ss_pred hHHHHHHHHHhcc--CcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHh
Confidence 000 00000000 000000 00000000000000000 0000000 00001124456
Q ss_pred cCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 313 KSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 313 ~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
.++++|+++++|++|.+ +++..+.+.+.+++ .++++++++||+.+.+ +++++.+.|.+|++
T Consensus 228 ~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 228 SEIKVPTLLTVGEFDTM-TPEAAREMQELIAG--SRLVVFPDGSHMTMIE-DPEVYFKLLSDFIR 288 (288)
T ss_pred hccCCCEEEEecCCCcc-CHHHHHHHHHhccC--CeEEEeCCCCCCcccC-CHHHHHHHHHHHhC
Confidence 78899999999999985 66777878777765 7899999999999998 99999999999984
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.95 E-value=3e-26 Score=198.04 Aligned_cols=249 Identities=16% Similarity=0.143 Sum_probs=157.9
Q ss_pred cCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 016589 105 VKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAF 184 (386)
Q Consensus 105 ~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~ 184 (386)
.+|.+++|.. | ++.+|+|||+||++.+...|..+...|.++||+|+++|+||||.|.......+++++.++++.++
T Consensus 4 ~~~~~~~~~~--~--~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~ 79 (273)
T PLN02211 4 ENGEEVTDMK--P--NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDF 79 (273)
T ss_pred cccccccccc--c--cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHH
Confidence 3566666655 3 23468999999999999999999999988899999999999998765443335889999999988
Q ss_pred HHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhh--hhhhcCCccc
Q 016589 185 LEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPL--FSLVVPKYQF 262 (386)
Q Consensus 185 l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 262 (386)
++.+.. .++++++||||||.++.. ++..+|+ +|+++|++++................. .......+..
T Consensus 80 i~~l~~---~~~v~lvGhS~GG~v~~~----~a~~~p~---~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 149 (273)
T PLN02211 80 LSSLPE---NEKVILVGHSAGGLSVTQ----AIHRFPK---KICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYEL 149 (273)
T ss_pred HHhcCC---CCCEEEEEECchHHHHHH----HHHhChh---heeEEEEeccccCCCCCCHHHHHhccccchhhhccceee
Confidence 887642 236999999999999999 8888998 899999997753211110000000000 0000000000
Q ss_pred cCCC-C--CCCCCCCCHHHHHHH-hcCCC----------CccCCcchhHHHHHHHHHHHHHhhccCC-CccEEEEeeCCC
Q 016589 263 KGAN-K--RGVPVSRDPAALLAK-YSDPL----------VYTGPIRVRTGHEILRLSSYLKRNFKSV-SVPFFVLHGTGD 327 (386)
Q Consensus 263 ~~~~-~--~~~~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~G~~D 327 (386)
.... . .........+..... +.+.. ....... .+. .....+...++ ++|+++|.|++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~vP~l~I~g~~D 222 (273)
T PLN02211 150 GFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPIL------ALR-SARFEEETGDIDKVPRVYIKTLHD 222 (273)
T ss_pred eeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCcc------ccc-cccccccccccCccceEEEEeCCC
Confidence 0000 0 000000011111111 00000 0000000 000 00011223345 789999999999
Q ss_pred CccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 328 KVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 328 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
..+|++..+.+.+.++. .+++.++ +||.++++ +|+++.+.|.+....
T Consensus 223 ~~ip~~~~~~m~~~~~~--~~~~~l~-~gH~p~ls-~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 223 HVVKPEQQEAMIKRWPP--SQVYELE-SDHSPFFS-TPFLLFGLLIKAAAS 269 (273)
T ss_pred CCCCHHHHHHHHHhCCc--cEEEEEC-CCCCcccc-CHHHHHHHHHHHHHH
Confidence 99999999999988875 6888887 79999998 999999999887654
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.95 E-value=6.9e-26 Score=203.63 Aligned_cols=258 Identities=17% Similarity=0.240 Sum_probs=162.1
Q ss_pred ccCCceEEEEEecCCCCCCceEEEEECCCCCChh-----------hHHHHH---HHHHhCCCeEEEeCCCC--CCCCCCC
Q 016589 104 GVKRNALFCRSWIPVSGELKGILIIIHGLNEHSG-----------RYAQFA---RQLTSCNFGVYAMDWIG--HGGSDGL 167 (386)
Q Consensus 104 ~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~-----------~~~~~~---~~L~~~G~~vi~~D~~G--~G~S~~~ 167 (386)
..+|.+++|..+++.+....|+||++||++++.. .|..++ ..|...+|+|+++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 3467899999998754344579999999999763 367775 35656789999999999 5554321
Q ss_pred ----CC-------CCCChHHHHHHHHHHHHHHHHhCCCCC-EEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCc
Q 016589 168 ----HG-------YVPSLDHVVADTGAFLEKIKLENPTVP-CFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAP 235 (386)
Q Consensus 168 ----~~-------~~~~~~~~~~d~~~~l~~l~~~~~~~~-i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p 235 (386)
.+ ..++++++++|+.++++.++.. + ++++||||||.+++. +|.++|+ +++++|++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~l~G~S~Gg~ia~~----~a~~~p~---~v~~lvl~~~ 160 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE----QIAAVVGGSMGGMQALE----WAIDYPE---RVRAIVVLAT 160 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC----CceEEEEECHHHHHHHH----HHHHChH---hhheEEEEcc
Confidence 11 1357889999999999887543 5 899999999999999 9999999 8999999998
Q ss_pred ccccCCCCchhhhHhhhhhhhc--CCccccCCCCCCCC-------------CCCCHHHHHHHhcCCCCcc----------
Q 016589 236 ALRVEPAHPIVGAVAPLFSLVV--PKYQFKGANKRGVP-------------VSRDPAALLAKYSDPLVYT---------- 290 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~---------- 290 (386)
......... ........... +.+..........+ .....+.....+.......
T Consensus 161 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 238 (351)
T TIGR01392 161 SARHSAWCI--AFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTR 238 (351)
T ss_pred CCcCCHHHH--HHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCcc
Confidence 654332110 00000000000 00000000000000 0001111111111100000
Q ss_pred ------------------CCcchhHHHHHHHHH------HHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCC
Q 016589 291 ------------------GPIRVRTGHEILRLS------SYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRF 346 (386)
Q Consensus 291 ------------------~~~~~~~~~~~~~~~------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~ 346 (386)
...........+... .++.+.+++|++|+|+|+|++|.++|++.++.+.+.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-- 316 (351)
T TIGR01392 239 FQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA-- 316 (351)
T ss_pred chHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh--
Confidence 000000000011100 123466788999999999999999999999999999987
Q ss_pred CcEE-----EcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 347 KDIK-----LYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 347 ~~~~-----~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
.+++ +++++||..+.+ +++++.+.|.+||+
T Consensus 317 ~~~~v~~~~i~~~~GH~~~le-~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 317 AGLRVTYVEIESPYGHDAFLV-ETDQVEELIRGFLR 351 (351)
T ss_pred cCCceEEEEeCCCCCcchhhc-CHHHHHHHHHHHhC
Confidence 4443 567999999998 99999999999984
No 35
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=4.4e-26 Score=191.16 Aligned_cols=258 Identities=18% Similarity=0.173 Sum_probs=158.7
Q ss_pred cCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCC---ChHHHHHHH
Q 016589 105 VKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVP---SLDHVVADT 181 (386)
Q Consensus 105 ~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~d~ 181 (386)
.++..+......+.. ..+.++|++||+|.+...|-.-.+.|++ .++|+++|++|+|.|+.|.-... ....+++.+
T Consensus 73 ~~~~~iw~~~~~~~~-~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesi 150 (365)
T KOG4409|consen 73 PNGIEIWTITVSNES-ANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESI 150 (365)
T ss_pred CCCceeEEEeecccc-cCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHH
Confidence 355666555554543 5578999999999999999999999987 69999999999999998753221 223344444
Q ss_pred HHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCC-------chhhhH---hh
Q 016589 182 GAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAH-------PIVGAV---AP 251 (386)
Q Consensus 182 ~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~-------~~~~~~---~~ 251 (386)
.++-. ..+-.+.+|+|||+||+++.. ||.+||+ +|+.|||++|+....... +...+. ..
T Consensus 151 E~WR~----~~~L~KmilvGHSfGGYLaa~----YAlKyPe---rV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~ 219 (365)
T KOG4409|consen 151 EQWRK----KMGLEKMILVGHSFGGYLAAK----YALKYPE---RVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFL 219 (365)
T ss_pred HHHHH----HcCCcceeEeeccchHHHHHH----HHHhChH---hhceEEEecccccccCCCcchhhcCCChHHHhhhhh
Confidence 44444 333446999999999999999 9999999 999999999997655321 011111 00
Q ss_pred hhhhhcCCccccCCCCCCCC-------------CCCCHHHH-HHHhcCCCCccCCcchhHHHHHHH----HHHHHHhhcc
Q 016589 252 LFSLVVPKYQFKGANKRGVP-------------VSRDPAAL-LAKYSDPLVYTGPIRVRTGHEILR----LSSYLKRNFK 313 (386)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 313 (386)
......+-.........+.. .....++. .++..... ...+........+.. ....+.+.+.
T Consensus 220 ~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n-~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~ 298 (365)
T KOG4409|consen 220 VATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCN-AQNPSGETAFKNLFEPGGWARRPMIQRLR 298 (365)
T ss_pred hhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhc-CCCCcHHHHHHHHHhccchhhhhHHHHHH
Confidence 00000000000000000000 00111111 11111111 011111111111111 1112334444
Q ss_pred CC--CccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 314 SV--SVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 314 ~i--~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
.+ ++|+++|+|++|- ++.....++.+.+....++.+++|++||..+.+ +|+.|++.+..++++
T Consensus 299 ~l~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylD-np~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 299 ELKKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLD-NPEFFNQIVLEECDK 363 (365)
T ss_pred hhccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEecCCCceeecC-CHHHHHHHHHHHHhc
Confidence 45 4999999999995 567777777776666668999999999999998 999999999998875
No 36
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=5.3e-25 Score=200.00 Aligned_cols=268 Identities=17% Similarity=0.156 Sum_probs=157.7
Q ss_pred eEeccCCc--eEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHH--
Q 016589 101 LFFGVKRN--ALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDH-- 176 (386)
Q Consensus 101 ~~~~~~g~--~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~-- 176 (386)
.+...+|. .+.+..+.+. +.+|+|||+||++++...|...+..|++ +|+|+++|+||||.|+.+.....+.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~--~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~ 159 (402)
T PLN02894 83 WFRSASNEPRFINTVTFDSK--EDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETE 159 (402)
T ss_pred ceecccCcCCeEEEEEecCC--CCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHH
Confidence 34444443 6666555432 3568999999999999899888899976 599999999999999765422112222
Q ss_pred --HHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhH-----
Q 016589 177 --VVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAV----- 249 (386)
Q Consensus 177 --~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~----- 249 (386)
+++++.++++.+ +..+++++||||||.+++. +|.++|+ +++++|+++|..............
T Consensus 160 ~~~~~~i~~~~~~l----~~~~~~lvGhS~GG~la~~----~a~~~p~---~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 228 (402)
T PLN02894 160 AWFIDSFEEWRKAK----NLSNFILLGHSFGGYVAAK----YALKHPE---HVQHLILVGPAGFSSESDDKSEWLTKFRA 228 (402)
T ss_pred HHHHHHHHHHHHHc----CCCCeEEEEECHHHHHHHH----HHHhCch---hhcEEEEECCccccCCcchhHHHHhhcch
Confidence 334444444433 2346999999999999999 9999999 899999998865432211100000
Q ss_pred ---hhhhhhh-----cC----------------CccccCCCC--CCCCCC-CCHHHHHHHhcCCCCccCCcc--hhHHHH
Q 016589 250 ---APLFSLV-----VP----------------KYQFKGANK--RGVPVS-RDPAALLAKYSDPLVYTGPIR--VRTGHE 300 (386)
Q Consensus 250 ---~~~~~~~-----~~----------------~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 300 (386)
...+... .+ .+....... ...... ..................... ......
T Consensus 229 ~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (402)
T PLN02894 229 TWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFS 308 (402)
T ss_pred hHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhcc
Confidence 0000000 00 000000000 000000 001111111100000000000 000000
Q ss_pred H-HHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 301 I-LRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 301 ~-~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
. .....++...+.++++|+++++|++|.+.+ .....+.+... ...++++++++||+.+.| +++++++.+.+|++..
T Consensus 309 ~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E-~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 309 FGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLD-NPSGFHSAVLYACRKY 385 (402)
T ss_pred CchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeecc-CHHHHHHHHHHHHHHh
Confidence 0 001123455678899999999999998765 55555555553 347899999999999998 9999999999999988
Q ss_pred hcCCcC
Q 016589 380 LGCSIE 385 (386)
Q Consensus 380 ~~~~~~ 385 (386)
+....+
T Consensus 386 ~~~~~~ 391 (402)
T PLN02894 386 LSPDRE 391 (402)
T ss_pred ccCCch
Confidence 765443
No 37
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=2.4e-26 Score=205.96 Aligned_cols=259 Identities=16% Similarity=0.173 Sum_probs=157.4
Q ss_pred eccCCceEEEEEecCCCCCCceEEEEECCCCCChh------------hHHHHHH---HHHhCCCeEEEeCCCCCCCCCCC
Q 016589 103 FGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSG------------RYAQFAR---QLTSCNFGVYAMDWIGHGGSDGL 167 (386)
Q Consensus 103 ~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~------------~~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~ 167 (386)
...+|.+++|..+++.+ .| +||+||+.++.. .|..++. .|...+|+|+++|+||||.|..
T Consensus 41 ~~~~~~~l~y~~~G~~~---~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~- 115 (343)
T PRK08775 41 AGLEDLRLRYELIGPAG---AP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD- 115 (343)
T ss_pred CCCCCceEEEEEeccCC---CC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC-
Confidence 34478889999887521 24 566655555444 6888886 5644469999999999998743
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhh
Q 016589 168 HGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVG 247 (386)
Q Consensus 168 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~ 247 (386)
. .++..++++|+.++++.++.+. .++++||||||++++. +|.++|+ +|+++|++++.....+......
T Consensus 116 ~--~~~~~~~a~dl~~ll~~l~l~~---~~~lvG~SmGG~vA~~----~A~~~P~---~V~~LvLi~s~~~~~~~~~~~~ 183 (343)
T PRK08775 116 V--PIDTADQADAIALLLDALGIAR---LHAFVGYSYGALVGLQ----FASRHPA---RVRTLVVVSGAHRAHPYAAAWR 183 (343)
T ss_pred C--CCCHHHHHHHHHHHHHHcCCCc---ceEEEEECHHHHHHHH----HHHHChH---hhheEEEECccccCCHHHHHHH
Confidence 2 2477889999999999986543 3579999999999999 9999999 8999999988654321100000
Q ss_pred hHhhhhhhhcCCcccc-CC----CCCCCCCCCCHHHHHHHhcCCCC-ccC-------------------CcchhHHHHHH
Q 016589 248 AVAPLFSLVVPKYQFK-GA----NKRGVPVSRDPAALLAKYSDPLV-YTG-------------------PIRVRTGHEIL 302 (386)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------------~~~~~~~~~~~ 302 (386)
................ .. ...........+.....+..... ... ...........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 263 (343)
T PRK08775 184 ALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLS 263 (343)
T ss_pred HHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHH
Confidence 0000000000000000 00 00000000011111111110000 000 00000000000
Q ss_pred HHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCC-CCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 303 RLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEG-LLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 303 ~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
.........+.++++|+|+++|++|.++|++...++.+.+. ++.+++++++ +||..+.| +++++.+.|.+||++.-
T Consensus 264 ~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE-~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 264 ESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLK-ETDRIDAILTTALRSTG 340 (343)
T ss_pred HHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhc-CHHHHHHHHHHHHHhcc
Confidence 00000012467899999999999999999998888888774 2389999985 99999999 99999999999998654
No 38
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=1.5e-25 Score=202.87 Aligned_cols=264 Identities=16% Similarity=0.193 Sum_probs=163.3
Q ss_pred cCCceEEEEEecCCCCCCceEEEEECCCCCChhh-------------HHHHHH---HHHhCCCeEEEeCCCCC-CCCCCC
Q 016589 105 VKRNALFCRSWIPVSGELKGILIIIHGLNEHSGR-------------YAQFAR---QLTSCNFGVYAMDWIGH-GGSDGL 167 (386)
Q Consensus 105 ~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~-------------~~~~~~---~L~~~G~~vi~~D~~G~-G~S~~~ 167 (386)
.+|.+++|..++..+++..|+|||+||++++... |..++. .|...+|+|+++|++|+ |.|+.+
T Consensus 30 ~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 30 LPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCC
Confidence 3567789999986433346899999999999874 556552 34355799999999983 545432
Q ss_pred CC-------------CCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcC
Q 016589 168 HG-------------YVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSA 234 (386)
Q Consensus 168 ~~-------------~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~ 234 (386)
.. ..++++++++++.+++++++.+. .++++||||||.+++. +|.++|+ +|+++|+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~---~~~lvG~S~Gg~ia~~----~a~~~p~---~v~~lvl~~ 179 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITR---LAAVVGGSMGGMQALE----WAIDYPD---RVRSALVIA 179 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCC---ceEEEEECHHHHHHHH----HHHhChH---hhhEEEEEC
Confidence 10 13589999999999999987653 1489999999999999 9999999 899999998
Q ss_pred cccccCCCCc-hhhhHhhhhhhhcCCccccCCCCCCC-C-------------CCCCHHHHHHHhcCCC------------
Q 016589 235 PALRVEPAHP-IVGAVAPLFSLVVPKYQFKGANKRGV-P-------------VSRDPAALLAKYSDPL------------ 287 (386)
Q Consensus 235 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~------------ 287 (386)
+......... .......... ..+.+.......... . ...........+....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~i~-~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~ 258 (379)
T PRK00175 180 SSARLSAQNIAFNEVARQAIL-ADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVE 258 (379)
T ss_pred CCcccCHHHHHHHHHHHHHHH-hCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCcc
Confidence 7654322100 0000000000 000000000000000 0 0000000000000000
Q ss_pred ---------------CccCCcchhHHHHHHHHH-------HHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcC
Q 016589 288 ---------------VYTGPIRVRTGHEILRLS-------SYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASR 345 (386)
Q Consensus 288 ---------------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~ 345 (386)
.................. .++.+.+++|++|+|+|+|++|.++|++.++.+.+.+++.
T Consensus 259 ~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a 338 (379)
T PRK00175 259 FQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAA 338 (379)
T ss_pred chHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhc
Confidence 000000000000111100 1245667899999999999999999999999999999862
Q ss_pred C--CcEEEcC-CCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 346 F--KDIKLYE-GLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 346 ~--~~~~~~~-~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
. .++.+++ ++||..+.+ +++++++.|.+||++..
T Consensus 339 ~~~~~l~~i~~~~GH~~~le-~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 339 GADVSYAEIDSPYGHDAFLL-DDPRYGRLVRAFLERAA 375 (379)
T ss_pred CCCeEEEEeCCCCCchhHhc-CHHHHHHHHHHHHHhhh
Confidence 1 2667674 999999998 99999999999998754
No 39
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.94 E-value=6.3e-27 Score=197.66 Aligned_cols=220 Identities=25% Similarity=0.388 Sum_probs=149.5
Q ss_pred EEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEech
Q 016589 126 LIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG-YVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHST 204 (386)
Q Consensus 126 vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~ 204 (386)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.+.. ..+++++.++|+.++++.+..+ +++++|||+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~lvG~S~ 75 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK----KVILVGHSM 75 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS----SEEEEEETH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc----ccccccccc
Confidence 7999999999999999999994 799999999999999987653 2358899999999999888763 599999999
Q ss_pred hhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCC--ch-hhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHH
Q 016589 205 GGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAH--PI-VGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLA 281 (386)
Q Consensus 205 Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (386)
||.+++. ++.++|+ +|+++|+++|........ .. ...+............. .................
T Consensus 76 Gg~~a~~----~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 146 (228)
T PF12697_consen 76 GGMIALR----LAARYPD---RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRR--LASRFFYRWFDGDEPED 146 (228)
T ss_dssp HHHHHHH----HHHHSGG---GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHTHHHHHH
T ss_pred ccccccc----ccccccc---ccccceeecccccccccccccccchhhhhhhhcccccccc--ccccccccccccccccc
Confidence 9999999 9999999 899999999987542211 00 00111111000000000 00000000000000000
Q ss_pred HhcCCCCccCCcchhHHHHHHH---HHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCc
Q 016589 282 KYSDPLVYTGPIRVRTGHEILR---LSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHD 358 (386)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 358 (386)
.... .......... ...+....++++++|+++++|++|.+++.+..+.+.+..++ +++++++++||+
T Consensus 147 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~ 216 (228)
T PF12697_consen 147 LIRS--------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN--AELVVIPGAGHF 216 (228)
T ss_dssp HHHH--------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT--EEEEEETTSSST
T ss_pred cccc--------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC--CEEEEECCCCCc
Confidence 0000 1111111111 23344567788899999999999999998888888888765 899999999999
Q ss_pred ccCCccHHHHHH
Q 016589 359 LLFELERDEVAQ 370 (386)
Q Consensus 359 ~~~~~~~~~~~~ 370 (386)
++.+ +++++.+
T Consensus 217 ~~~~-~p~~~~~ 227 (228)
T PF12697_consen 217 LFLE-QPDEVAE 227 (228)
T ss_dssp HHHH-SHHHHHH
T ss_pred cHHH-CHHHHhc
Confidence 9888 8888875
No 40
>PLN02511 hydrolase
Probab=99.94 E-value=4.2e-26 Score=206.35 Aligned_cols=268 Identities=12% Similarity=0.063 Sum_probs=164.6
Q ss_pred cceeEeccCCceEEEEEecCC---CCCCceEEEEECCCCCChhh-H-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCC
Q 016589 98 STSLFFGVKRNALFCRSWIPV---SGELKGILIIIHGLNEHSGR-Y-AQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVP 172 (386)
Q Consensus 98 ~~~~~~~~~g~~l~~~~~~p~---~~~~~p~vv~lHG~~~~~~~-~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~ 172 (386)
+...+.+.||..+.+..+.+. ....+|+||++||+++++.. | ..++..+.++||+|+++|+||||.|+......
T Consensus 72 ~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~- 150 (388)
T PLN02511 72 RRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQF- 150 (388)
T ss_pred eEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCE-
Confidence 345677889988887655421 22457899999999876643 4 56777777889999999999999997543222
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCC-----Cchhh
Q 016589 173 SLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPA-----HPIVG 247 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~-----~~~~~ 247 (386)
......+|+.++++++...++..+++++||||||.+++. ++.++|+.. .|.+++++++..+.... .....
T Consensus 151 ~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~----yl~~~~~~~-~v~~~v~is~p~~l~~~~~~~~~~~~~ 225 (388)
T PLN02511 151 YSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVN----YLGEEGENC-PLSGAVSLCNPFDLVIADEDFHKGFNN 225 (388)
T ss_pred EcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHH----HHHhcCCCC-CceEEEEECCCcCHHHHHHHHhccHHH
Confidence 234568899999999999877778999999999999999 999999711 27787777665443100 00000
Q ss_pred hHhhhh----hhhcCCc--cccCCC----CCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCc
Q 016589 248 AVAPLF----SLVVPKY--QFKGAN----KRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSV 317 (386)
Q Consensus 248 ~~~~~~----~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 317 (386)
.....+ ....... .+.... ...........+....+..+. .......+++.. .+....+++|++
T Consensus 226 ~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~-----~gf~~~~~yy~~-~s~~~~L~~I~v 299 (388)
T PLN02511 226 VYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVS-----FGFKSVDAYYSN-SSSSDSIKHVRV 299 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhc-----CCCCCHHHHHHH-cCchhhhccCCC
Confidence 000000 0000000 000000 000000000111111111110 011111111111 113456788999
Q ss_pred cEEEEeeCCCCccChHHH-HHHHHHhhcCCCcEEEcCCCCCcccCCccHHH------HHHHHHHHHhhhh
Q 016589 318 PFFVLHGTGDKVTDPLAS-QDLYNEAASRFKDIKLYEGLLHDLLFELERDE------VAQDIIVWLEKKL 380 (386)
Q Consensus 318 P~lii~G~~D~~v~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~------~~~~i~~fl~~~~ 380 (386)
|+|+|+|++|+++|++.. ....+..+ +.++++++++||..+.| .++. +.+.+.+|++...
T Consensus 300 PtLiI~g~dDpi~p~~~~~~~~~~~~p--~~~l~~~~~gGH~~~~E-~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 300 PLLCIQAANDPIAPARGIPREDIKANP--NCLLIVTPSGGHLGWVA-GPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred CeEEEEcCCCCcCCcccCcHhHHhcCC--CEEEEECCCcceecccc-CCCCCCCCccHHHHHHHHHHHHH
Confidence 999999999999997754 33444444 48999999999999988 5543 5788999997654
No 41
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.94 E-value=2.2e-25 Score=194.98 Aligned_cols=246 Identities=24% Similarity=0.321 Sum_probs=155.8
Q ss_pred CCceEEEEECCCCCChhhHHHHHHHHHhC-CCeEEEeCCCCCC-CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEE
Q 016589 121 ELKGILIIIHGLNEHSGRYAQFARQLTSC-NFGVYAMDWIGHG-GSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCF 198 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G-~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~ 198 (386)
..+|+||++|||+++...|+.+...|.+. |+.|+++|++|+| .|..+.+..|+..+.++-+..+...... .+++
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~----~~~~ 131 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFV----EPVS 131 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcC----cceE
Confidence 46899999999999999999999999865 5999999999999 5555555556766666666666655444 3599
Q ss_pred EEEechhhHHHHhhhhhHhhcCCccccceeEEE---EcCcccccCCCCc-hhhh-Hhhhh---hhhcCCccccC------
Q 016589 199 LFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIV---LSAPALRVEPAHP-IVGA-VAPLF---SLVVPKYQFKG------ 264 (386)
Q Consensus 199 lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lv---l~~p~~~~~~~~~-~~~~-~~~~~---~~~~~~~~~~~------ 264 (386)
++|||+||.+|+. +|+.+|+ .|++++ ++++.....+... .... +.... ....+......
T Consensus 132 lvghS~Gg~va~~----~Aa~~P~---~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 204 (326)
T KOG1454|consen 132 LVGHSLGGIVALK----AAAYYPE---TVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSE 204 (326)
T ss_pred EEEeCcHHHHHHH----HHHhCcc---cccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeH
Confidence 9999999999999 9999999 899998 6666554433221 1111 11000 00000000000
Q ss_pred CCCC-----CCCCCCCHHHHHHHhcCCC--CccCCcchhHHHHHHHHHHHHHhhccCCC-ccEEEEeeCCCCccChHHHH
Q 016589 265 ANKR-----GVPVSRDPAALLAKYSDPL--VYTGPIRVRTGHEILRLSSYLKRNFKSVS-VPFFVLHGTGDKVTDPLASQ 336 (386)
Q Consensus 265 ~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~lii~G~~D~~v~~~~~~ 336 (386)
.... ........+........+. ........................++++. +|+|+++|++|+++|.+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~ 284 (326)
T KOG1454|consen 205 GLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAE 284 (326)
T ss_pred hhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHH
Confidence 0000 0000011111111110000 00000000000000000112344566775 99999999999999999999
Q ss_pred HHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 337 DLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
.+.+++++ +++++++++||..+.| .|+++++.|..|+....
T Consensus 285 ~~~~~~pn--~~~~~I~~~gH~~h~e-~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 285 ELKKKLPN--AELVEIPGAGHLPHLE-RPEEVAALLRSFIARLR 325 (326)
T ss_pred HHHhhCCC--ceEEEeCCCCcccccC-CHHHHHHHHHHHHHHhc
Confidence 99998855 9999999999999997 99999999999998753
No 42
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.94 E-value=3.4e-25 Score=189.92 Aligned_cols=238 Identities=18% Similarity=0.278 Sum_probs=145.2
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHHHHHH-HHHHHHHHHHhCCCCCEEEE
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG-YVPSLDHVVAD-TGAFLEKIKLENPTVPCFLF 200 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~d-~~~~l~~l~~~~~~~~i~lv 200 (386)
+|+||++||++++...|..+++.|+ +||+|+++|+||+|.|+.+.. ...++++.+++ +..+++.+ +.++++++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 75 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL----GIEPFFLV 75 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc----CCCeEEEE
Confidence 3689999999999999999999997 789999999999999976543 23466777777 55555544 33469999
Q ss_pred EechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhh------Hhhhhhhh-cCCccccCCCCCCC-C-
Q 016589 201 GHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGA------VAPLFSLV-VPKYQFKGANKRGV-P- 271 (386)
Q Consensus 201 GhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~-~- 271 (386)
|||+||.+++. +|.++|+ .+++++++++............. ....+... ...+.......... .
T Consensus 76 G~S~Gg~ia~~----~a~~~~~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (251)
T TIGR03695 76 GYSMGGRIALY----YALQYPE---RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQ 148 (251)
T ss_pred EeccHHHHHHH----HHHhCch---heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeec
Confidence 99999999999 9999998 89999999876543321100000 00000000 00000000000000 0
Q ss_pred CCCCHHHHHHHhcCCCCccCCcchhHHHHHH--HHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcE
Q 016589 272 VSRDPAALLAKYSDPLVYTGPIRVRTGHEIL--RLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDI 349 (386)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~ 349 (386)
....+.......... ............... ....+....+.++++|+++++|++|..++ +..+.+.+..++ .++
T Consensus 149 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~--~~~ 224 (251)
T TIGR03695 149 KNLPPEQRQALRAKR-LANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN--LTL 224 (251)
T ss_pred ccCChHHhHHHHHhc-ccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC--CcE
Confidence 000111110000000 000000000000000 00112234567889999999999998764 455556555544 899
Q ss_pred EEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 350 KLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 350 ~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
+++|++||+.+.+ +++++.+.|.+|++
T Consensus 225 ~~~~~~gH~~~~e-~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 225 VIIANAGHNIHLE-NPEAFAKILLAFLE 251 (251)
T ss_pred EEEcCCCCCcCcc-ChHHHHHHHHHHhC
Confidence 9999999999988 89999999999984
No 43
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.93 E-value=2.8e-24 Score=195.23 Aligned_cols=240 Identities=15% Similarity=0.159 Sum_probs=158.8
Q ss_pred ccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCCh-hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChH
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHS-GRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLD 175 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 175 (386)
.+.+.+...+|..+.++.+.|...++.|+||++||+++.. ..|..+++.|+++||+|+++|+||+|.|..... ..+..
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-~~d~~ 246 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-TQDSS 246 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-cccHH
Confidence 4567777788888999988887556678888888887764 568888999999999999999999999865321 11222
Q ss_pred HHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCc-hhhhHhhh
Q 016589 176 HVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHP-IVGAVAPL 252 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~-~~~~~~~~ 252 (386)
.. ..++++++.... +..+++++|||+||++++. +|..+|+ +++++|+++|......... ....+...
T Consensus 247 ~~---~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~----~A~~~p~---ri~a~V~~~~~~~~~~~~~~~~~~~p~~ 316 (414)
T PRK05077 247 LL---HQAVLNALPNVPWVDHTRVAAFGFRFGANVAVR----LAYLEPP---RLKAVACLGPVVHTLLTDPKRQQQVPEM 316 (414)
T ss_pred HH---HHHHHHHHHhCcccCcccEEEEEEChHHHHHHH----HHHhCCc---CceEEEEECCccchhhcchhhhhhchHH
Confidence 22 245566665442 3458999999999999999 8888998 8999999998764211100 00000000
Q ss_pred h-hhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhc-cCCCccEEEEeeCCCCcc
Q 016589 253 F-SLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNF-KSVSVPFFVLHGTGDKVT 330 (386)
Q Consensus 253 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~P~lii~G~~D~~v 330 (386)
. ..+...+. .. ..+.+.+...... + .......+ .++++|+|+++|++|.++
T Consensus 317 ~~~~la~~lg--------~~-~~~~~~l~~~l~~----------------~--sl~~~~~l~~~i~~PvLiI~G~~D~iv 369 (414)
T PRK05077 317 YLDVLASRLG--------MH-DASDEALRVELNR----------------Y--SLKVQGLLGRRCPTPMLSGYWKNDPFS 369 (414)
T ss_pred HHHHHHHHhC--------CC-CCChHHHHHHhhh----------------c--cchhhhhhccCCCCcEEEEecCCCCCC
Confidence 0 00000000 00 0011111111000 0 00001112 578999999999999999
Q ss_pred ChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 331 DPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
|++.++.+.+..++ .+++++|++ | +.+ .++++.+.+.+||++++
T Consensus 370 P~~~a~~l~~~~~~--~~l~~i~~~-~--~~e-~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 370 PEEDSRLIASSSAD--GKLLEIPFK-P--VYR-NFDKALQEISDWLEDRL 413 (414)
T ss_pred CHHHHHHHHHhCCC--CeEEEccCC-C--ccC-CHHHHHHHHHHHHHHHh
Confidence 99999988777755 899999986 2 344 89999999999999875
No 44
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.93 E-value=8.3e-24 Score=183.08 Aligned_cols=251 Identities=18% Similarity=0.232 Sum_probs=157.4
Q ss_pred ccCCceEEEEEecCCCCCCceEEEEECCCCC----ChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHH
Q 016589 104 GVKRNALFCRSWIPVSGELKGILIIIHGLNE----HSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVA 179 (386)
Q Consensus 104 ~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~----~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 179 (386)
..+|..+....+.|.+.+ ++.||++||++. +...|..+++.|+++||.|+++|+||||.|++.. .+++++.+
T Consensus 8 ~~~~~~l~g~~~~p~~~~-~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~ 83 (274)
T TIGR03100 8 SCEGETLVGVLHIPGASH-TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDA 83 (274)
T ss_pred EcCCcEEEEEEEcCCCCC-CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHH
Confidence 355778888888776543 456777777553 3444677899999999999999999999987532 36778889
Q ss_pred HHHHHHHHHHHhCC-CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhh-hc
Q 016589 180 DTGAFLEKIKLENP-TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSL-VV 257 (386)
Q Consensus 180 d~~~~l~~l~~~~~-~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~-~~ 257 (386)
|+.++++++....+ ..+++++|||+||.+++. +|.. ++ +|+++|+++|......... .......+.. ..
T Consensus 84 d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~----~a~~-~~---~v~~lil~~p~~~~~~~~~-~~~~~~~~~~~~~ 154 (274)
T TIGR03100 84 DIAAAIDAFREAAPHLRRIVAWGLCDAASAALL----YAPA-DL---RVAGLVLLNPWVRTEAAQA-ASRIRHYYLGQLL 154 (274)
T ss_pred HHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHH----Hhhh-CC---CccEEEEECCccCCcccch-HHHHHHHHHHHHh
Confidence 99999999986642 356999999999999999 6554 44 7999999999865322111 1111111111 11
Q ss_pred CCccccCCCCCCCCCCCCHHHHHHHhcCCCC---ccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHH
Q 016589 258 PKYQFKGANKRGVPVSRDPAALLAKYSDPLV---YTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLA 334 (386)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~ 334 (386)
....+...... ..+.......+..... ......... .....+...+..+++|+++++|+.|...+ ..
T Consensus 155 ~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~ 224 (274)
T TIGR03100 155 SADFWRKLLSG----EVNLGSSLRGLGDALLKARQKGDEVAHG-----GLAERMKAGLERFQGPVLFILSGNDLTAQ-EF 224 (274)
T ss_pred ChHHHHHhcCC----CccHHHHHHHHHHHHHhhhhcCCCcccc-----hHHHHHHHHHHhcCCcEEEEEcCcchhHH-HH
Confidence 11000000000 0111111111110000 000000000 02233456667779999999999998863 22
Q ss_pred H------HHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 335 S------QDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 335 ~------~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
. ..+.+.+..++++++.+++++|++..+..++++.+.|.+||+
T Consensus 225 ~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 225 ADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 2 344444544558899999999988777678999999999996
No 45
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.93 E-value=1.5e-24 Score=191.32 Aligned_cols=259 Identities=15% Similarity=0.155 Sum_probs=154.9
Q ss_pred ceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHHH
Q 016589 99 TSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG-YVPSLDHV 177 (386)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~ 177 (386)
...+...+|.+++|..+++++ .++|||+||++++...+ .+...+...+|+|+++|+||||.|+.+.. ..++.++.
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~---~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPD---GKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCC---CCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 456667789999998876432 35799999988775543 34445545689999999999999986542 23467788
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchh-----h-hHhh
Q 016589 178 VADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIV-----G-AVAP 251 (386)
Q Consensus 178 ~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~-----~-~~~~ 251 (386)
++|+..++++++.+ +++++||||||.+++. ++.++|+ +++++|++++........... . ....
T Consensus 82 ~~dl~~l~~~l~~~----~~~lvG~S~GG~ia~~----~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (306)
T TIGR01249 82 VADIEKLREKLGIK----NWLVFGGSWGSTLALA----YAQTHPE---VVTGLVLRGIFLLREKEWSWFYEGGASMIYPD 150 (306)
T ss_pred HHHHHHHHHHcCCC----CEEEEEECHHHHHHHH----HHHHChH---hhhhheeeccccCCHHHHHHHHhcchhhhCHH
Confidence 88888888877543 5999999999999999 9999999 899999998765322110000 0 0000
Q ss_pred hhhhhcCCcccc----CCCC--CCCCCCCCHHH---HHHH---hc-CCCCccCCc--------chhHH-HHH---HHH--
Q 016589 252 LFSLVVPKYQFK----GANK--RGVPVSRDPAA---LLAK---YS-DPLVYTGPI--------RVRTG-HEI---LRL-- 304 (386)
Q Consensus 252 ~~~~~~~~~~~~----~~~~--~~~~~~~~~~~---~~~~---~~-~~~~~~~~~--------~~~~~-~~~---~~~-- 304 (386)
.+..+....... .... ........... .... +. ......... ..... ... +..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (306)
T TIGR01249 151 AWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNK 230 (306)
T ss_pred HHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHh
Confidence 001110000000 0000 00000111110 0000 00 011100000 00000 000 000
Q ss_pred -----HHHHHhhccCC-CccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 305 -----SSYLKRNFKSV-SVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 305 -----~~~~~~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
...+...+.++ ++|+|+++|++|.++|.+.++.+.+.+++ .++++++++||..+.+. ..+.|.+|+.+
T Consensus 231 ~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~----~~~~i~~~~~~ 304 (306)
T TIGR01249 231 GFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPE--AELKVTNNAGHSAFDPN----NLAALVHALET 304 (306)
T ss_pred chhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCC--CEEEEECCCCCCCCChH----HHHHHHHHHHH
Confidence 11134456677 69999999999999999999999998875 88999999999876442 34556666554
No 46
>PRK10985 putative hydrolase; Provisional
Probab=99.93 E-value=3.8e-24 Score=189.94 Aligned_cols=271 Identities=15% Similarity=0.077 Sum_probs=162.7
Q ss_pred ceeEeccCCceEEEEEec-CCCCCCceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChH
Q 016589 99 TSLFFGVKRNALFCRSWI-PVSGELKGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLD 175 (386)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~-p~~~~~~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 175 (386)
...+...||..+.+.... +.....+|+||++||++++... +..+++.|.++||+|+++|+||||.++......+..
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~- 111 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHS- 111 (324)
T ss_pred eeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECC-
Confidence 345778888777655432 2223457899999999877543 567889999999999999999999875432211122
Q ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCc-----hhhhHh
Q 016589 176 HVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHP-----IVGAVA 250 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~-----~~~~~~ 250 (386)
...+|+..+++++....+..+++++||||||.+++. +++++++. ..+.++|+++++.+...... ....+.
T Consensus 112 ~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~----~~~~~~~~-~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~ 186 (324)
T PRK10985 112 GETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLAC----LLAKEGDD-LPLDAAVIVSAPLMLEACSYRMEQGFSRVYQ 186 (324)
T ss_pred CchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHH----HHHhhCCC-CCccEEEEEcCCCCHHHHHHHHhhhHHHHHH
Confidence 236889999999888766678999999999998888 77776641 13788888888765431110 000111
Q ss_pred hhhhh-hcCCcc-ccCCCCCCCCCCCCHHHHHH-----HhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEe
Q 016589 251 PLFSL-VVPKYQ-FKGANKRGVPVSRDPAALLA-----KYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLH 323 (386)
Q Consensus 251 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 323 (386)
..+.. +..... ........ ...+.+.... .+.+ .............+.+.... ....++++++|+++|+
T Consensus 187 ~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~fd~-~~~~~~~g~~~~~~~y~~~~-~~~~l~~i~~P~lii~ 262 (324)
T PRK10985 187 RYLLNLLKANAARKLAAYPGT--LPINLAQLKSVRRLREFDD-LITARIHGFADAIDYYRQCS-ALPLLNQIRKPTLIIH 262 (324)
T ss_pred HHHHHHHHHHHHHHHHhcccc--ccCCHHHHhcCCcHHHHhh-hheeccCCCCCHHHHHHHCC-hHHHHhCCCCCEEEEe
Confidence 10000 000000 00000000 0111111110 0000 00111111222233332222 3566789999999999
Q ss_pred eCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCcc----HHHHHHHHHHHHhhhhc
Q 016589 324 GTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELE----RDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 324 G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~----~~~~~~~i~~fl~~~~~ 381 (386)
|++|++++++....+.+..+ +.++.+++++||+.+.+.. ....-+.+.+|+....+
T Consensus 263 g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 263 AKDDPFMTHEVIPKPESLPP--NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred cCCCCCCChhhChHHHHhCC--CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 99999999887776655443 3788999999999988732 23455678888876543
No 47
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.92 E-value=9e-24 Score=192.31 Aligned_cols=243 Identities=22% Similarity=0.268 Sum_probs=156.6
Q ss_pred eccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHH
Q 016589 103 FGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTG 182 (386)
Q Consensus 103 ~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~ 182 (386)
...++.+++|..+++ +..|+|||+||++++...|..+...|.+ +|+|+++|+||||.|..... ..+++++++++.
T Consensus 114 ~~~~~~~i~~~~~g~---~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~ 188 (371)
T PRK14875 114 ARIGGRTVRYLRLGE---GDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAVG-AGSLDELAAAVL 188 (371)
T ss_pred ceEcCcEEEEecccC---CCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 344577787776654 2357999999999999999999999966 49999999999999965433 348888888888
Q ss_pred HHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCc-hhhhH---------hhh
Q 016589 183 AFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHP-IVGAV---------APL 252 (386)
Q Consensus 183 ~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~-~~~~~---------~~~ 252 (386)
++++.+.. .+++++|||+||.+++. +|..+|+ ++.++|+++|......... ....+ ...
T Consensus 189 ~~~~~~~~----~~~~lvG~S~Gg~~a~~----~a~~~~~---~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (371)
T PRK14875 189 AFLDALGI----ERAHLVGHSMGGAVALR----LAARAPQ---RVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPV 257 (371)
T ss_pred HHHHhcCC----ccEEEEeechHHHHHHH----HHHhCch---heeEEEEECcCCcCcccchhHHHHhhcccchhHHHHH
Confidence 88876643 35999999999999999 8999998 8999999987643221111 00000 000
Q ss_pred hhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHH-HHH---HHHHHHhhccCCCccEEEEeeCCCC
Q 016589 253 FSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHE-ILR---LSSYLKRNFKSVSVPFFVLHGTGDK 328 (386)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~i~~P~lii~G~~D~ 328 (386)
+..... . .............................. .+. ...+....+.++++|+++++|++|.
T Consensus 258 ~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 326 (371)
T PRK14875 258 LELLFA-------D----PALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDR 326 (371)
T ss_pred HHHHhc-------C----hhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCC
Confidence 000000 0 000000000000000000000000000000 000 0112344567889999999999999
Q ss_pred ccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 329 VTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 329 ~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
++|++..+.+. ...++.+++++||+++.+ +++++.+.|.+|+++
T Consensus 327 ~vp~~~~~~l~-----~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 327 IIPAAHAQGLP-----DGVAVHVLPGAGHMPQME-AAADVNRLLAEFLGK 370 (371)
T ss_pred ccCHHHHhhcc-----CCCeEEEeCCCCCChhhh-CHHHHHHHHHHHhcc
Confidence 99988765432 237899999999999888 899999999999975
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=99.91 E-value=2e-23 Score=201.48 Aligned_cols=264 Identities=14% Similarity=0.118 Sum_probs=158.1
Q ss_pred eeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC-CCCCChHHHH
Q 016589 100 SLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLH-GYVPSLDHVV 178 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~ 178 (386)
..+...+|.+++|..+++.+ .|+|||+||++++...|..+.+.| ..||+|+++|+||||.|+.+. ...+++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~---~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPD---RPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCC---CCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 45567789999999887532 579999999999999999999999 567999999999999998643 2345899999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC------CC--chhhhHh
Q 016589 179 ADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP------AH--PIVGAVA 250 (386)
Q Consensus 179 ~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~------~~--~~~~~~~ 250 (386)
+|+.++++.+... .+++++||||||.+++. ++.. ++...++..++.+++...... .. .......
T Consensus 81 ~dl~~~i~~l~~~---~~~~lvGhS~Gg~~a~~----~a~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (582)
T PRK05855 81 DDFAAVIDAVSPD---RPVHLLAHDWGSIQGWE----AVTR-PRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLA 152 (582)
T ss_pred HHHHHHHHHhCCC---CcEEEEecChHHHHHHH----HHhC-ccchhhhhhheeccCCchHHHHHHHhhcccccchhhhh
Confidence 9999999987643 25999999999999988 5544 442224544444433211000 00 0000000
Q ss_pred hhhhhhcCCc-----cccCCCCCCCCCCCCHHHHHHHhcCCCCccCC--------cchhHHHHHHHH---HHHHHhhccC
Q 016589 251 PLFSLVVPKY-----QFKGANKRGVPVSRDPAALLAKYSDPLVYTGP--------IRVRTGHEILRL---SSYLKRNFKS 314 (386)
Q Consensus 251 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~~~~~~~~ 314 (386)
.......... ............ ................... .........+.. ..........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (582)
T PRK05855 153 RALGQLLRSWYIYLFHLPVLPELLWRL-GLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERY 231 (582)
T ss_pred HHHHHHhhhHHHHHHhCCCCcHHHhcc-chhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCC
Confidence 0000000000 000000000000 0000000100000000000 000000000000 0111223455
Q ss_pred CCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 315 VSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 315 i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
+++|+++++|++|.++|+...+.+.+.+++ .++++++ +||+.+.| +++++.+.|.+|+++.-
T Consensus 232 ~~~P~lii~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~-~gH~~~~e-~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 232 TDVPVQLIVPTGDPYVRPALYDDLSRWVPR--LWRREIK-AGHWLPMS-HPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ccCceEEEEeCCCcccCHHHhccccccCCc--ceEEEcc-CCCcchhh-ChhHHHHHHHHHHHhcc
Confidence 899999999999999999988888776654 6777776 69999988 99999999999998643
No 49
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.91 E-value=2e-23 Score=217.27 Aligned_cols=245 Identities=16% Similarity=0.203 Sum_probs=156.2
Q ss_pred CceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC-------CCCCChHHHHHHHHHHHHHHHHhCCC
Q 016589 122 LKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLH-------GYVPSLDHVVADTGAFLEKIKLENPT 194 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~d~~~~l~~l~~~~~~ 194 (386)
.+|+|||+||++++...|..+...|.+ +|+|+++|+||||.|+... ...++++.+++++.++++.+..+
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~--- 1445 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG--- 1445 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC---
Confidence 467999999999999999999999965 5999999999999997542 12347888899999898877543
Q ss_pred CCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCch-hhhH-hhhh-hhhcC----CccccCCCC
Q 016589 195 VPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPI-VGAV-APLF-SLVVP----KYQFKGANK 267 (386)
Q Consensus 195 ~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~-~~~~-~~~~-~~~~~----~~~~~~~~~ 267 (386)
+++++||||||.+++. ++.++|+ +|+++|++++.......... .... .... ..... .+.......
T Consensus 1446 -~v~LvGhSmGG~iAl~----~A~~~P~---~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 1517 (1655)
T PLN02980 1446 -KVTLVGYSMGARIALY----MALRFSD---KIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSG 1517 (1655)
T ss_pred -CEEEEEECHHHHHHHH----HHHhChH---hhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccH
Confidence 5999999999999999 9999999 89999998765332211000 0000 0000 00000 000000000
Q ss_pred CCC-CCCCCHHHHHHHhcCCCCccCCcchhHHHHHHH-----HHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHH
Q 016589 268 RGV-PVSRDPAALLAKYSDPLVYTGPIRVRTGHEILR-----LSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNE 341 (386)
Q Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~ 341 (386)
... .....+ ............. ........+. ...++.+.++++++|+|+|+|++|..++ +.+.++.+.
T Consensus 1518 ~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~ 1592 (1655)
T PLN02980 1518 ELWKSLRNHP-HFNKIVASRLLHK---DVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYRE 1592 (1655)
T ss_pred HHhhhhccCH-HHHHHHHHHHhcC---CHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHH
Confidence 000 000001 0111000000000 0000111111 0122346688999999999999999875 566677776
Q ss_pred hhcC----------CCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhcCCc
Q 016589 342 AASR----------FKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLGCSI 384 (386)
Q Consensus 342 ~~~~----------~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~~ 384 (386)
+++. .++++++|++||.++.| +|+++.+.|.+||++..+.+.
T Consensus 1593 i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE-~Pe~f~~~I~~FL~~~~~~~~ 1644 (1655)
T PLN02980 1593 IGKSKESGNDKGKEIIEIVEIPNCGHAVHLE-NPLPVIRALRKFLTRLHNSST 1644 (1655)
T ss_pred ccccccccccccccceEEEEECCCCCchHHH-CHHHHHHHHHHHHHhccccCC
Confidence 6542 25799999999999998 999999999999998765543
No 50
>PRK10566 esterase; Provisional
Probab=99.91 E-value=3.7e-22 Score=171.24 Aligned_cols=209 Identities=18% Similarity=0.193 Sum_probs=135.8
Q ss_pred CCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCC-----ChHHHHHHHHHHHHHHHHhC--
Q 016589 121 ELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG-YVP-----SLDHVVADTGAFLEKIKLEN-- 192 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~-----~~~~~~~d~~~~l~~l~~~~-- 192 (386)
++.|+||++||++++...|..+++.|+++||.|+++|+||||.+..... ... ......+|+.++++++....
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4578999999999998889999999999999999999999997632211 100 11234577777888876543
Q ss_pred CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEE-EcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCC
Q 016589 193 PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIV-LSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVP 271 (386)
Q Consensus 193 ~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lv-l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (386)
+.++++++|||+||.+++. +++++|+ +.+.+ ++++... ........+... ..
T Consensus 105 ~~~~i~v~G~S~Gg~~al~----~~~~~~~----~~~~~~~~~~~~~-----------~~~~~~~~~~~~-----~~--- 157 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALG----IMARHPW----VKCVASLMGSGYF-----------TSLARTLFPPLI-----PE--- 157 (249)
T ss_pred CccceeEEeecccHHHHHH----HHHhCCC----eeEEEEeeCcHHH-----------HHHHHHhccccc-----cc---
Confidence 3458999999999999999 8888886 44433 3332110 000000000000 00
Q ss_pred CCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHH--HHHhhccCC-CccEEEEeeCCCCccChHHHHHHHHHhhcCC--
Q 016589 272 VSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSS--YLKRNFKSV-SVPFFVLHGTGDKVTDPLASQDLYNEAASRF-- 346 (386)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-- 346 (386)
........ .+...... +....+.++ ++|+|+++|++|.++|++.++.+.+.++..+
T Consensus 158 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~ 218 (249)
T PRK10566 158 TAAQQAEF-------------------NNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLD 218 (249)
T ss_pred ccccHHHH-------------------HHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC
Confidence 00000000 00000000 112334555 6899999999999999999999998886542
Q ss_pred --CcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 347 --KDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 347 --~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
.+++.++++||.+. .+..+.+.+||++++
T Consensus 219 ~~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 219 KNLTCLWEPGVRHRIT-----PEALDAGVAFFRQHL 249 (249)
T ss_pred cceEEEecCCCCCccC-----HHHHHHHHHHHHhhC
Confidence 46678899999642 346889999998763
No 51
>PLN02872 triacylglycerol lipase
Probab=99.91 E-value=3.9e-23 Score=185.30 Aligned_cols=278 Identities=16% Similarity=0.164 Sum_probs=173.2
Q ss_pred cccceeEeccCCceEEEEEecCCC----CCCceEEEEECCCCCChhhH------HHHHHHHHhCCCeEEEeCCCCCCCCC
Q 016589 96 RWSTSLFFGVKRNALFCRSWIPVS----GELKGILIIIHGLNEHSGRY------AQFARQLTSCNFGVYAMDWIGHGGSD 165 (386)
Q Consensus 96 ~~~~~~~~~~~g~~l~~~~~~p~~----~~~~p~vv~lHG~~~~~~~~------~~~~~~L~~~G~~vi~~D~~G~G~S~ 165 (386)
..++..+++.||..|......+.. ..++|+|+++||++.++..| ..++..|+++||+|+++|+||++.|.
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 356788999999999888774322 13468999999999888877 34666788999999999999987653
Q ss_pred CC-------C-CCCCChHHHH-HHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcc
Q 016589 166 GL-------H-GYVPSLDHVV-ADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 166 ~~-------~-~~~~~~~~~~-~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
+. . .+.+++++++ .|+.++++++.... ..+++++|||+||.+++. +..+|+...+|+.+++++|.
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~-~~~v~~VGhS~Gg~~~~~-----~~~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT-NSKIFIVGHSQGTIMSLA-----ALTQPNVVEMVEAAALLCPI 196 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc-CCceEEEEECHHHHHHHH-----HhhChHHHHHHHHHHHhcch
Confidence 21 1 1134777777 89999999997543 358999999999999987 55788876678888999988
Q ss_pred cccCCCC-chhhhHhh-hhhhh---cCCccccCCC-----------------------CCCCCCCCCHHHHHHHhcCCCC
Q 016589 237 LRVEPAH-PIVGAVAP-LFSLV---VPKYQFKGAN-----------------------KRGVPVSRDPAALLAKYSDPLV 288 (386)
Q Consensus 237 ~~~~~~~-~~~~~~~~-~~~~~---~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~ 288 (386)
....... +....+.. ....+ .....+.... -.+.....+...+......
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~--- 273 (395)
T PLN02872 197 SYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEY--- 273 (395)
T ss_pred hhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhc---
Confidence 6553221 11111111 00000 0000000000 0000000000000000000
Q ss_pred ccCCcchhHHHHHHH----------------------HHHHHHhhccCC--CccEEEEeeCCCCccChHHHHHHHHHhhc
Q 016589 289 YTGPIRVRTGHEILR----------------------LSSYLKRNFKSV--SVPFFVLHGTGDKVTDPLASQDLYNEAAS 344 (386)
Q Consensus 289 ~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~i--~~P~lii~G~~D~~v~~~~~~~~~~~~~~ 344 (386)
.+...+.....-+.+ ......-.++++ ++|+++++|++|.+++++.++.+.+.+++
T Consensus 274 ~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~ 353 (395)
T PLN02872 274 EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS 353 (395)
T ss_pred CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC
Confidence 000111110000000 000011235666 57999999999999999999999999875
Q ss_pred CCCcEEEcCCCCCc--ccCCccHHHHHHHHHHHHhhhhcCC
Q 016589 345 RFKDIKLYEGLLHD--LLFELERDEVAQDIIVWLEKKLGCS 383 (386)
Q Consensus 345 ~~~~~~~~~~~gH~--~~~~~~~~~~~~~i~~fl~~~~~~~ 383 (386)
. .+++.+++++|. .+.++.++++.+.|.+|++++.+.+
T Consensus 354 ~-~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~~ 393 (395)
T PLN02872 354 K-PELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKSS 393 (395)
T ss_pred c-cEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhcc
Confidence 3 578889999997 3344479999999999999876543
No 52
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.90 E-value=2.7e-22 Score=180.22 Aligned_cols=260 Identities=19% Similarity=0.208 Sum_probs=160.1
Q ss_pred EeccCCceEEEEEecCCCC-CCceEEEEECCCCCChhhH-----HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChH
Q 016589 102 FFGVKRNALFCRSWIPVSG-ELKGILIIIHGLNEHSGRY-----AQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLD 175 (386)
Q Consensus 102 ~~~~~g~~l~~~~~~p~~~-~~~p~vv~lHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 175 (386)
+...++.+++. |.|... ..+++||++||+..+...+ ..+++.|+++||+|+++|++|+|.++.. .+++
T Consensus 42 v~~~~~~~l~~--~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~ 115 (350)
T TIGR01836 42 VYREDKVVLYR--YTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLD 115 (350)
T ss_pred EEEcCcEEEEE--ecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHH
Confidence 33334444433 345432 3356799999986554443 6899999999999999999999977532 3677
Q ss_pred HHHH-HHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhh--
Q 016589 176 HVVA-DTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPL-- 252 (386)
Q Consensus 176 ~~~~-d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~-- 252 (386)
+++. ++.++++++....+..+++++||||||.+++. +++.+|+ +++++|++++..+..............
T Consensus 116 d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~----~~~~~~~---~v~~lv~~~~p~~~~~~~~~~~~~~~~~~ 188 (350)
T TIGR01836 116 DYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLC----YAALYPD---KIKNLVTMVTPVDFETPGNMLSNWARHVD 188 (350)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHH----HHHhCch---heeeEEEeccccccCCCCchhhhhccccC
Confidence 7764 58899999988777778999999999999999 8999998 899999999888764322211111000
Q ss_pred -------------------hhhhcCCccccCCCCCCCCCCCCHHHHHHH------hcCCCCccCCcchhHHHHHHHH---
Q 016589 253 -------------------FSLVVPKYQFKGANKRGVPVSRDPAALLAK------YSDPLVYTGPIRVRTGHEILRL--- 304 (386)
Q Consensus 253 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--- 304 (386)
+..+.+................+++..... ..+.. ........++.+.
T Consensus 189 ~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~----~~~~~~~~~~~~~~~~ 264 (350)
T TIGR01836 189 IDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSP----DQAGEAFRQFVKDFYQ 264 (350)
T ss_pred HHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCc----CccHHHHHHHHHHHHh
Confidence 000000000000000000000111111111 11111 0111111111110
Q ss_pred -HHHH---------HhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCC-c-cHHHHHHHH
Q 016589 305 -SSYL---------KRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFE-L-ERDEVAQDI 372 (386)
Q Consensus 305 -~~~~---------~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~-~~~~~~~~i 372 (386)
.... ...++++++|+++++|++|.++|++.++.+.+.+++.++++++++ +||..+.. + .++++++.|
T Consensus 265 ~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i 343 (350)
T TIGR01836 265 QNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAI 343 (350)
T ss_pred cCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHH
Confidence 0000 113567899999999999999999999999998876556778887 57776554 2 268999999
Q ss_pred HHHHhhh
Q 016589 373 IVWLEKK 379 (386)
Q Consensus 373 ~~fl~~~ 379 (386)
.+||+++
T Consensus 344 ~~wl~~~ 350 (350)
T TIGR01836 344 GKWLQAR 350 (350)
T ss_pred HHHHHhC
Confidence 9999763
No 53
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.90 E-value=2.1e-23 Score=162.09 Aligned_cols=231 Identities=21% Similarity=0.262 Sum_probs=173.4
Q ss_pred ccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHH-hCCCeEEEeCCCCCCCCCCCCCCCCChH
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLT-SCNFGVYAMDWIGHGGSDGLHGYVPSLD 175 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~-~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 175 (386)
.+...+.+.|..+++.+....+ .+.|+++++|+..++....-.++.-+. +-+.+|+.++|||+|.|.+.+ +.+
T Consensus 54 ye~i~l~T~D~vtL~a~~~~~E--~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp----sE~ 127 (300)
T KOG4391|consen 54 YERIELRTRDKVTLDAYLMLSE--SSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSP----SEE 127 (300)
T ss_pred ceEEEEEcCcceeEeeeeeccc--CCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCc----ccc
Confidence 5667888999999988777643 468999999999999998877776554 558999999999999998865 445
Q ss_pred HHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC-CCchhhhHhhh
Q 016589 176 HVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP-AHPIVGAVAPL 252 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~-~~~~~~~~~~~ 252 (386)
...-|..++++++.... +..+++++|.|.||.+|+. +|+++.+ ++.++|+-+.+.+... ..+.... +
T Consensus 128 GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~----lask~~~---ri~~~ivENTF~SIp~~~i~~v~p---~ 197 (300)
T KOG4391|consen 128 GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIH----LASKNSD---RISAIIVENTFLSIPHMAIPLVFP---F 197 (300)
T ss_pred ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEE----eeccchh---heeeeeeechhccchhhhhheecc---c
Confidence 56678889999987654 3447999999999999999 9999998 9999999888776521 1111000 0
Q ss_pred hhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccCh
Q 016589 253 FSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDP 332 (386)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~ 332 (386)
.....+.+- ..+.+. -...+..-++|.|++.|.+|.+|||
T Consensus 198 ~~k~i~~lc------------------------------------~kn~~~----S~~ki~~~~~P~LFiSGlkDelVPP 237 (300)
T KOG4391|consen 198 PMKYIPLLC------------------------------------YKNKWL----SYRKIGQCRMPFLFISGLKDELVPP 237 (300)
T ss_pred hhhHHHHHH------------------------------------HHhhhc----chhhhccccCceEEeecCccccCCc
Confidence 000000000 000000 1233456688999999999999999
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhcCCcC
Q 016589 333 LASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLGCSIE 385 (386)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~~~ 385 (386)
..++.+++..++..+++..+|++.|.--+- .+-.++.|.+|+.+....+++
T Consensus 238 ~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i--~dGYfq~i~dFlaE~~~~~P~ 288 (300)
T KOG4391|consen 238 VMMRQLYELCPSRTKRLAEFPDGTHNDTWI--CDGYFQAIEDFLAEVVKSSPE 288 (300)
T ss_pred HHHHHHHHhCchhhhhheeCCCCccCceEE--eccHHHHHHHHHHHhccCChH
Confidence 999999999999889999999999976553 566899999999987654443
No 54
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.89 E-value=4.8e-22 Score=166.84 Aligned_cols=254 Identities=18% Similarity=0.191 Sum_probs=164.0
Q ss_pred eEEEEEe-cCCCCCCceEEEEECCCCCChhhHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016589 109 ALFCRSW-IPVSGELKGILIIIHGLNEHSGRYAQFARQLTS-CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLE 186 (386)
Q Consensus 109 ~l~~~~~-~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~ 186 (386)
++.|..+ ...+....|+++++||+.++...|+.+...|++ -+-.|+++|.|.||.|+....+ +...+++|+..+++
T Consensus 37 ~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~Fi~ 114 (315)
T KOG2382|consen 37 RLAYDSVYSSENLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLFID 114 (315)
T ss_pred ccceeeeecccccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHHHH
Confidence 3444444 344446789999999999999999999999984 4789999999999999877666 78999999999999
Q ss_pred HHHHhCCCCCEEEEEechhh-HHHHhhhhhHhhcCCccccceeEEEEcC--cccccCCCCchhhhHhhhhhhhcCCccc-
Q 016589 187 KIKLENPTVPCFLFGHSTGG-AVVLKRTFVQAASYPHIEAMLEGIVLSA--PALRVEPAHPIVGAVAPLFSLVVPKYQF- 262 (386)
Q Consensus 187 ~l~~~~~~~~i~lvGhS~Gg-~~a~~~~~~~a~~~p~~~~~v~~lvl~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 262 (386)
..+......++.++|||||| .+++. .+...|+ .+..+|+.. |. ........ ....+..+...-..
T Consensus 115 ~v~~~~~~~~~~l~GHsmGG~~~~m~----~t~~~p~---~~~rliv~D~sP~-~~~~~~~e---~~e~i~~m~~~d~~~ 183 (315)
T KOG2382|consen 115 GVGGSTRLDPVVLLGHSMGGVKVAMA----ETLKKPD---LIERLIVEDISPG-GVGRSYGE---YRELIKAMIQLDLSI 183 (315)
T ss_pred HcccccccCCceecccCcchHHHHHH----HHHhcCc---ccceeEEEecCCc-cCCcccch---HHHHHHHHHhccccc
Confidence 98755444579999999999 66666 7888998 677776643 42 11111111 11111111100000
Q ss_pred c--CCCC----CCCCCCCCHHHHHHHhcCCCC---cc----CCcchhHHHHHHHH--HHHHHhhc--cCCCccEEEEeeC
Q 016589 263 K--GANK----RGVPVSRDPAALLAKYSDPLV---YT----GPIRVRTGHEILRL--SSYLKRNF--KSVSVPFFVLHGT 325 (386)
Q Consensus 263 ~--~~~~----~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~--~~~~~~~~--~~i~~P~lii~G~ 325 (386)
. ...+ ..... ..+.....+....+. .. -........+.+.. ...+...+ .....|++++.|.
T Consensus 184 ~~~~~rke~~~~l~~~-~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~ 262 (315)
T KOG2382|consen 184 GVSRGRKEALKSLIEV-GFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGL 262 (315)
T ss_pred cccccHHHHHHHHHHH-hcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecC
Confidence 0 0000 00000 000000011100000 00 01112222222222 11122223 5568899999999
Q ss_pred CCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 326 GDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 326 ~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
++..++.+.-..+.+.++. ++++.++++||+.+.| +|+++.+.|.+|+.+.
T Consensus 263 ~S~fv~~~~~~~~~~~fp~--~e~~~ld~aGHwVh~E-~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 263 QSKFVPDEHYPRMEKIFPN--VEVHELDEAGHWVHLE-KPEEFIESISEFLEEP 313 (315)
T ss_pred CCCCcChhHHHHHHHhccc--hheeecccCCceeecC-CHHHHHHHHHHHhccc
Confidence 9999999988888888877 9999999999999999 9999999999998764
No 55
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.89 E-value=1.5e-21 Score=175.18 Aligned_cols=260 Identities=11% Similarity=0.121 Sum_probs=161.9
Q ss_pred CCceEEEEEecCCCCCCceEEEEECCCCCChhh-------------HHHHHH---HHHhCCCeEEEeCCCCCCCCCCC--
Q 016589 106 KRNALFCRSWIPVSGELKGILIIIHGLNEHSGR-------------YAQFAR---QLTSCNFGVYAMDWIGHGGSDGL-- 167 (386)
Q Consensus 106 ~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~-------------~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~-- 167 (386)
+..+|.|..|+..+....++||++|+++++... |..++- .|--..|-||++|..|-|.|..|
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 356789999998766667999999999886422 554442 23334599999999997653211
Q ss_pred ---------C---------CCCCChHHHHHHHHHHHHHHHHhCCCCCEE-EEEechhhHHHHhhhhhHhhcCCcccccee
Q 016589 168 ---------H---------GYVPSLDHVVADTGAFLEKIKLENPTVPCF-LFGHSTGGAVVLKRTFVQAASYPHIEAMLE 228 (386)
Q Consensus 168 ---------~---------~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~-lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~ 228 (386)
+ ...+++.++++++.+++++++.+. +. ++||||||++++. +|.++|+ +|+
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~----~~~vvG~SmGG~ial~----~a~~~P~---~v~ 187 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIAR----LHAVMGPSMGGMQAQE----WAVHYPH---MVE 187 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCC----ceEEEEECHHHHHHHH----HHHHChH---hhh
Confidence 1 112578899999999998876653 65 9999999999999 9999999 899
Q ss_pred EEEEcCcccccCCCCchhhhHhhhhh--hhcCCccccCCCCCCCC-------------CCCCHHHHHHHhcCC--CC---
Q 016589 229 GIVLSAPALRVEPAHPIVGAVAPLFS--LVVPKYQFKGANKRGVP-------------VSRDPAALLAKYSDP--LV--- 288 (386)
Q Consensus 229 ~lvl~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~--~~--- 288 (386)
++|+++.......... ......... ...+.+.-..+.....+ ....++.....+... ..
T Consensus 188 ~lv~ia~~~~~~~~~~-~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~ 266 (389)
T PRK06765 188 RMIGVIGNPQNDAWTS-VNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDP 266 (389)
T ss_pred eEEEEecCCCCChhHH-HHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccc
Confidence 9999877654332210 000110101 11111111111000000 000111111000000 00
Q ss_pred --------------------ccCCcchhHHHHHHHHH---------HHHHhhccCCCccEEEEeeCCCCccChHHHHHHH
Q 016589 289 --------------------YTGPIRVRTGHEILRLS---------SYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLY 339 (386)
Q Consensus 289 --------------------~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~ 339 (386)
..............+.. .++.+.+.++++|+|+|+|++|.++|++..+++.
T Consensus 267 ~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la 346 (389)
T PRK06765 267 YEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMV 346 (389)
T ss_pred cccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 00000000011111111 0245567789999999999999999999999998
Q ss_pred HHhhc--CCCcEEEcCC-CCCcccCCccHHHHHHHHHHHHhh
Q 016589 340 NEAAS--RFKDIKLYEG-LLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 340 ~~~~~--~~~~~~~~~~-~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
+.+++ ++++++++++ +||+.+.+ +++++.+.|.+|+++
T Consensus 347 ~~lp~~~~~a~l~~I~s~~GH~~~le-~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 347 DILQKQGKYAEVYEIESINGHMAGVF-DIHLFEKKIYEFLNR 387 (389)
T ss_pred HHhhhcCCCeEEEEECCCCCcchhhc-CHHHHHHHHHHHHcc
Confidence 88864 3478899985 99999998 999999999999975
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.89 E-value=1.9e-21 Score=157.30 Aligned_cols=218 Identities=21% Similarity=0.288 Sum_probs=164.3
Q ss_pred ccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChH
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTS-CNFGVYAMDWIGHGGSDGLHGYVPSLD 175 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~ 175 (386)
.+.....+..|..+....+.|+. ..++++++.||...+......+...|.. -+++|+.+||+|+|.|.+.+.. .
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~-~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE----~ 109 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPE-AAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE----R 109 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCcc-ccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc----c
Confidence 44456667778888777777754 3468999999997777766566666654 3799999999999999987543 4
Q ss_pred HHHHHHHHHHHHHHHhC-CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhh
Q 016589 176 HVVADTGAFLEKIKLEN-PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFS 254 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~-~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 254 (386)
...+|+.++.++++..+ +.++++++|+|+|...++. +|++.| +.++|+.+|..+.... +
T Consensus 110 n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~----Lasr~~-----~~alVL~SPf~S~~rv------~----- 169 (258)
T KOG1552|consen 110 NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVD----LASRYP-----LAAVVLHSPFTSGMRV------A----- 169 (258)
T ss_pred cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhh----HhhcCC-----cceEEEeccchhhhhh------h-----
Confidence 66899999999999998 5779999999999999999 999998 7889999998654210 0
Q ss_pred hhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHH
Q 016589 255 LVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLA 334 (386)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~ 334 (386)
.+..... .+.+.. ...+.++.+++|+|++||++|.++|..+
T Consensus 170 --~~~~~~~------------------~~~d~f-------------------~~i~kI~~i~~PVLiiHgtdDevv~~sH 210 (258)
T KOG1552|consen 170 --FPDTKTT------------------YCFDAF-------------------PNIEKISKITCPVLIIHGTDDEVVDFSH 210 (258)
T ss_pred --ccCcceE------------------Eeeccc-------------------cccCcceeccCCEEEEecccCceecccc
Confidence 0000000 000000 0145667889999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhc
Q 016589 335 SQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 381 (386)
..++++..+++ .+-.++.|+||.... ...++.+.+..|+.....
T Consensus 211 g~~Lye~~k~~-~epl~v~g~gH~~~~--~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 211 GKALYERCKEK-VEPLWVKGAGHNDIE--LYPEYIEHLRRFISSVLP 254 (258)
T ss_pred cHHHHHhcccc-CCCcEEecCCCcccc--cCHHHHHHHHHHHHHhcc
Confidence 99999999864 577778899996543 467888889999876544
No 57
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.87 E-value=4.2e-21 Score=183.56 Aligned_cols=248 Identities=14% Similarity=0.102 Sum_probs=168.5
Q ss_pred CCCccccceeEeccCCceEEEEEecCCCCCC---ceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCCCCCCC
Q 016589 92 EVPCRWSTSLFFGVKRNALFCRSWIPVSGEL---KGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGHGGSDG 166 (386)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~---~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~~ 166 (386)
......+.+.+...||.++++.++.|.+.++ .|+||++||.+..... |....+.|+.+||.|+.+|+||.+....
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 4455678889999999999999999976532 4999999999755444 7788899999999999999997654311
Q ss_pred C---CCCCCChHHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC
Q 016589 167 L---HGYVPSLDHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP 241 (386)
Q Consensus 167 ~---~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~ 241 (386)
. ......-....+|+.+.++++.... +.++++++|||+||++++. .+.+.|. +++.+...+..+...
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~----~~~~~~~----f~a~~~~~~~~~~~~ 511 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLL----AATKTPR----FKAAVAVAGGVDWLL 511 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHH----HHhcCch----hheEEeccCcchhhh
Confidence 1 0000012234678888888665443 3347999999999999999 7777774 777776666543211
Q ss_pred CCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEE
Q 016589 242 AHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFV 321 (386)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~li 321 (386)
..... ...+ ...+.... ..+ .. ....+... .......++++|+|+
T Consensus 512 ~~~~~----------~~~~------------~~~~~~~~---~~~------~~--~~~~~~~~--sp~~~~~~i~~P~Ll 556 (620)
T COG1506 512 YFGES----------TEGL------------RFDPEENG---GGP------PE--DREKYEDR--SPIFYADNIKTPLLL 556 (620)
T ss_pred hcccc----------chhh------------cCCHHHhC---CCc------cc--ChHHHHhc--ChhhhhcccCCCEEE
Confidence 00000 0000 00000000 000 00 00000000 124456889999999
Q ss_pred EeeCCCCccChHHHHHHHHHhhc--CCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhcC
Q 016589 322 LHGTGDKVTDPLASQDLYNEAAS--RFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLGC 382 (386)
Q Consensus 322 i~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 382 (386)
|||++|..||.+++..+++++.. .+.+++++|+.+|.+....+...+.+.+.+|++++++.
T Consensus 557 iHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 557 IHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred EeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999998875 34678899999999887657888999999999998864
No 58
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.86 E-value=1.1e-20 Score=148.17 Aligned_cols=144 Identities=27% Similarity=0.496 Sum_probs=116.0
Q ss_pred EEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH-hCCCCCEEEEEec
Q 016589 125 ILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKL-ENPTVPCFLFGHS 203 (386)
Q Consensus 125 ~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~-~~~~~~i~lvGhS 203 (386)
+||++||++++...|..+++.|+++||.|+.+|+|++|.+.. ..++.++++.+.. ..+..+++++|||
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~l~G~S 69 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG-----------ADAVERVLADIRAGYPDPDRIILIGHS 69 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH-----------SHHHHHHHHHHHHHHCTCCEEEEEEET
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch-----------hHHHHHHHHHHHhhcCCCCcEEEEEEc
Confidence 589999999999999999999999999999999999997622 1245555555422 2245689999999
Q ss_pred hhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHh
Q 016589 204 TGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKY 283 (386)
Q Consensus 204 ~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (386)
+||.+++. ++.+++ +++++|+++|...
T Consensus 70 ~Gg~~a~~----~~~~~~----~v~~~v~~~~~~~--------------------------------------------- 96 (145)
T PF12695_consen 70 MGGAIAAN----LAARNP----RVKAVVLLSPYPD--------------------------------------------- 96 (145)
T ss_dssp HHHHHHHH----HHHHST----TESEEEEESESSG---------------------------------------------
T ss_pred cCcHHHHH----Hhhhcc----ceeEEEEecCccc---------------------------------------------
Confidence 99999999 888775 6999999998310
Q ss_pred cCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCc
Q 016589 284 SDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHD 358 (386)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 358 (386)
.+.+...++|+++++|++|..++++..++++++++ .+.++++++|++|+
T Consensus 97 -------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 -------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp -------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred -------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 12335667899999999999999999999999998 45899999999995
No 59
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.86 E-value=2.6e-21 Score=148.83 Aligned_cols=244 Identities=14% Similarity=0.151 Sum_probs=156.3
Q ss_pred eccCCceEEEEEecCCCCCCceEEEEECCCCCC-hhhHHHHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCChHHH---
Q 016589 103 FGVKRNALFCRSWIPVSGELKGILIIIHGLNEH-SGRYAQFARQLTSC-NFGVYAMDWIGHGGSDGLHGYVPSLDHV--- 177 (386)
Q Consensus 103 ~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~-~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~--- 177 (386)
...+|.+|+|..++..+ ..|++++|.-++ ...|.+....|-+. -+.|+++|.||+|.|.+|.... ..+..
T Consensus 26 v~vng~ql~y~~~G~G~----~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf-~~~ff~~D 100 (277)
T KOG2984|consen 26 VHVNGTQLGYCKYGHGP----NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF-EVQFFMKD 100 (277)
T ss_pred eeecCceeeeeecCCCC----ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccc-hHHHHHHh
Confidence 34678999999987543 378889996554 45688877777643 3899999999999997765432 44444
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhc
Q 016589 178 VADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVV 257 (386)
Q Consensus 178 ~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 257 (386)
+++..++++.++.+ ++.++|+|-||..++. .|+++++ .|..+|+.+............ +..+.
T Consensus 101 a~~avdLM~aLk~~----~fsvlGWSdGgiTali----vAak~~e---~v~rmiiwga~ayvn~~~~ma------~kgiR 163 (277)
T KOG2984|consen 101 AEYAVDLMEALKLE----PFSVLGWSDGGITALI----VAAKGKE---KVNRMIIWGAAAYVNHLGAMA------FKGIR 163 (277)
T ss_pred HHHHHHHHHHhCCC----CeeEeeecCCCeEEEE----eeccChh---hhhhheeecccceecchhHHH------HhchH
Confidence 44455555555544 5999999999999999 9999999 898888887665443211110 00000
Q ss_pred CCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHH--HHHHHHhhccCCCccEEEEeeCCCCccChHHH
Q 016589 258 PKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILR--LSSYLKRNFKSVSVPFFVLHGTGDKVTDPLAS 335 (386)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~ 335 (386)
....+.............++.....+... .....++.. .....+..+.+++||+||++|++|++++...+
T Consensus 164 dv~kWs~r~R~P~e~~Yg~e~f~~~wa~w--------vD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv 235 (277)
T KOG2984|consen 164 DVNKWSARGRQPYEDHYGPETFRTQWAAW--------VDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHV 235 (277)
T ss_pred HHhhhhhhhcchHHHhcCHHHHHHHHHHH--------HHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCc
Confidence 00001000000000111111111111100 000000000 01123556789999999999999999998887
Q ss_pred HHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 336 QDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
--+....+. +++++.|.++|.+++. -+++++..+.+|+++.
T Consensus 236 ~fi~~~~~~--a~~~~~peGkHn~hLr-ya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 236 CFIPVLKSL--AKVEIHPEGKHNFHLR-YAKEFNKLVLDFLKST 276 (277)
T ss_pred cchhhhccc--ceEEEccCCCcceeee-chHHHHHHHHHHHhcc
Confidence 666666554 8999999999999988 8999999999999863
No 60
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.86 E-value=1e-19 Score=158.15 Aligned_cols=276 Identities=13% Similarity=0.148 Sum_probs=173.5
Q ss_pred CCCccccceeEeccCCceEEEEEecCCCC------CCceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCCCC
Q 016589 92 EVPCRWSTSLFFGVKRNALFCRSWIPVSG------ELKGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGHGG 163 (386)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~------~~~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~ 163 (386)
..+.......+...||..+......+... ...|+||++||+.+++.. -+.++..+.++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 34555677788999999999988855443 457999999998765543 4678888889999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCC-
Q 016589 164 SDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPA- 242 (386)
Q Consensus 164 S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~- 242 (386)
+.-.....++.- ..+|+.+++++++..+|..++..+|.||||++.+. |..+..+....+.++++++|+-.....
T Consensus 168 ~~LtTpr~f~ag-~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~n----YLGE~g~~~~l~~a~~v~~Pwd~~~~~~ 242 (409)
T KOG1838|consen 168 SKLTTPRLFTAG-WTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTN----YLGEEGDNTPLIAAVAVCNPWDLLAASR 242 (409)
T ss_pred CccCCCceeecC-CHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHH----HhhhccCCCCceeEEEEeccchhhhhhh
Confidence 876544443433 37999999999999999999999999999999999 888777655456667777777532110
Q ss_pred ---Cch-hhhHhhhhhh----h-cCCcc---ccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHh
Q 016589 243 ---HPI-VGAVAPLFSL----V-VPKYQ---FKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKR 310 (386)
Q Consensus 243 ---~~~-~~~~~~~~~~----~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (386)
... ...+...+.. + ..... ...........+..-.+..+.+.. .........++++... ...
T Consensus 243 ~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~-----~~~gf~~~deYY~~aS-s~~ 316 (409)
T KOG1838|consen 243 SIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTR-----PMFGFKSVDEYYKKAS-SSN 316 (409)
T ss_pred HHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhh-----hhcCCCcHHHHHhhcc-hhh
Confidence 000 0001111100 0 00000 000000001111111122221111 1112222333333322 366
Q ss_pred hccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCc---cHHHHHHH-HHHHHhhh
Q 016589 311 NFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFEL---ERDEVAQD-IIVWLEKK 379 (386)
Q Consensus 311 ~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~~~~~~-i~~fl~~~ 379 (386)
.+.+|++|+|+|++.+|+++|++. .-..+...+++.-+.+-..+||..++|. ......+. +.+|+...
T Consensus 317 ~v~~I~VP~L~ina~DDPv~p~~~-ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 317 YVDKIKVPLLCINAADDPVVPEEA-IPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred hcccccccEEEEecCCCCCCCccc-CCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 788999999999999999998763 2222333444466666678899999884 34445555 77777654
No 61
>PRK11071 esterase YqiA; Provisional
Probab=99.85 E-value=8.7e-20 Score=148.33 Aligned_cols=183 Identities=15% Similarity=0.114 Sum_probs=120.0
Q ss_pred eEEEEECCCCCChhhHHH--HHHHHHh--CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEE
Q 016589 124 GILIIIHGLNEHSGRYAQ--FARQLTS--CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFL 199 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~--~~~~L~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~l 199 (386)
|+||++||++++...|.. +.+.+.+ .+|+|+++|+||++ ++.++++.++++.+.. +++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~----~~~~l 65 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGG----DPLGL 65 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCC----CCeEE
Confidence 589999999999999874 4566654 37999999999885 2456666666665433 46999
Q ss_pred EEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHH
Q 016589 200 FGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAAL 279 (386)
Q Consensus 200 vGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (386)
+|||+||.+++. +|.++|. + +|+++|..... ....... .... ......
T Consensus 66 vG~S~Gg~~a~~----~a~~~~~---~---~vl~~~~~~~~------~~~~~~~----~~~~-~~~~~~----------- 113 (190)
T PRK11071 66 VGSSLGGYYATW----LSQCFML---P---AVVVNPAVRPF------ELLTDYL----GENE-NPYTGQ----------- 113 (190)
T ss_pred EEECHHHHHHHH----HHHHcCC---C---EEEECCCCCHH------HHHHHhc----CCcc-cccCCC-----------
Confidence 999999999999 8998884 2 57788865421 1111110 0000 000000
Q ss_pred HHHhcCCCCccCCcchhHHHHHHHHHHHH-HhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCc
Q 016589 280 LAKYSDPLVYTGPIRVRTGHEILRLSSYL-KRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHD 358 (386)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 358 (386)
. .....+.+.....+ ...+. .++|+++++|++|.++|++.+.++++. ++.++++|++|.
T Consensus 114 ------------~--~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~ 173 (190)
T PRK11071 114 ------------Q--YVLESRHIYDLKVMQIDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHA 173 (190)
T ss_pred ------------c--EEEcHHHHHHHHhcCCccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcc
Confidence 0 00000111100000 11122 677889999999999999999999884 456788999997
Q ss_pred ccCCccHHHHHHHHHHHHh
Q 016589 359 LLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 359 ~~~~~~~~~~~~~i~~fl~ 377 (386)
+ . +.+++.+.|.+|++
T Consensus 174 f--~-~~~~~~~~i~~fl~ 189 (190)
T PRK11071 174 F--V-GFERYFNQIVDFLG 189 (190)
T ss_pred h--h-hHHHhHHHHHHHhc
Confidence 6 3 55889999999975
No 62
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.85 E-value=1.3e-19 Score=151.61 Aligned_cols=274 Identities=15% Similarity=0.123 Sum_probs=164.5
Q ss_pred eeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHH
Q 016589 100 SLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHV 177 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~ 177 (386)
..+.++||..+......++....+|.||++||+.|++.+ -+.+.+.+.++||.|+++|+|||+.+.......++ ...
T Consensus 52 e~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh-~G~ 130 (345)
T COG0429 52 ERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH-SGE 130 (345)
T ss_pred EEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec-ccc
Confidence 467777877776666665555667999999998876654 46788899999999999999999988754333222 223
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC-----CCchh-hhHhh
Q 016589 178 VADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP-----AHPIV-GAVAP 251 (386)
Q Consensus 178 ~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~-----~~~~~-~~~~~ 251 (386)
.+|+..++++++...+..++..+|.|+||.+... +..+..+.. .+.+.+.++.+.+... ..... ..+.+
T Consensus 131 t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~----ylgeeg~d~-~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r 205 (345)
T COG0429 131 TEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLAN----YLGEEGDDL-PLDAAVAVSAPFDLEACAYRLDSGFSLRLYSR 205 (345)
T ss_pred hhHHHHHHHHHHHhCCCCceEEEEecccHHHHHH----HHHhhccCc-ccceeeeeeCHHHHHHHHHHhcCchhhhhhHH
Confidence 4999999999999888899999999999955544 444443311 3455554444333321 11111 11111
Q ss_pred hhhhhcCCccccCCCCCCCCCCCCHHHHHHH-----hcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCC
Q 016589 252 LFSLVVPKYQFKGANKRGVPVSRDPAALLAK-----YSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTG 326 (386)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 326 (386)
.+.+....................-....+. .-|..............++++... ....+.+|.+|+|+|++.+
T Consensus 206 ~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aS-s~~~L~~Ir~PtLii~A~D 284 (345)
T COG0429 206 YLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQAS-SLPLLPKIRKPTLIINAKD 284 (345)
T ss_pred HHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcc-ccccccccccceEEEecCC
Confidence 1111111000000000000000110111111 112222233333444445554433 2567889999999999999
Q ss_pred CCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCc---cHH-HHHHHHHHHHhhhhc
Q 016589 327 DKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFEL---ERD-EVAQDIIVWLEKKLG 381 (386)
Q Consensus 327 D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~-~~~~~i~~fl~~~~~ 381 (386)
|++++++..-+.... .++++.+..-+.+||..+... ++. ...+.+.+|++..+.
T Consensus 285 DP~~~~~~iP~~~~~-~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 285 DPFMPPEVIPKLQEM-LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred CCCCChhhCCcchhc-CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 999998776555443 335578888889999988762 222 556778999987654
No 63
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.84 E-value=6.7e-20 Score=153.62 Aligned_cols=195 Identities=18% Similarity=0.223 Sum_probs=134.0
Q ss_pred EEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCC-CCCCCCC-C--------CChHHHHHHH
Q 016589 112 CRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGG-SDGLHGY-V--------PSLDHVVADT 181 (386)
Q Consensus 112 ~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~-S~~~~~~-~--------~~~~~~~~d~ 181 (386)
.++..|.++++.|.||++|++.|-....+.+++.|+++||.|+++|+.+-.. ....... . ...+...+|+
T Consensus 3 ay~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (218)
T PF01738_consen 3 AYVARPEGGGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADL 82 (218)
T ss_dssp EEEEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHH
T ss_pred EEEEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHH
Confidence 4556676656789999999988877788899999999999999999864433 1111000 0 0123456788
Q ss_pred HHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCC
Q 016589 182 GAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPK 259 (386)
Q Consensus 182 ~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 259 (386)
.+++++++... +..+|.++|+|+||.+++. ++...+ .+++.+...|.....
T Consensus 83 ~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~----~a~~~~----~~~a~v~~yg~~~~~------------------- 135 (218)
T PF01738_consen 83 QAAVDYLRAQPEVDPGKIGVVGFCWGGKLALL----LAARDP----RVDAAVSFYGGSPPP------------------- 135 (218)
T ss_dssp HHHHHHHHCTTTCEEEEEEEEEETHHHHHHHH----HHCCTT----TSSEEEEES-SSSGG-------------------
T ss_pred HHHHHHHHhccccCCCcEEEEEEecchHHhhh----hhhhcc----ccceEEEEcCCCCCC-------------------
Confidence 88899998765 3458999999999999999 777774 589998877711000
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHH
Q 016589 260 YQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLY 339 (386)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~ 339 (386)
.......++++|+++++|++|+.++.+..+.+.
T Consensus 136 -----------------------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~ 168 (218)
T PF01738_consen 136 -----------------------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALE 168 (218)
T ss_dssp -----------------------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHH
T ss_pred -----------------------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHH
Confidence 013445678999999999999999999888888
Q ss_pred HHhhc--CCCcEEEcCCCCCcccCCc-------cHHHHHHHHHHHHhhhh
Q 016589 340 NEAAS--RFKDIKLYEGLLHDLLFEL-------ERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 340 ~~~~~--~~~~~~~~~~~gH~~~~~~-------~~~~~~~~i~~fl~~~~ 380 (386)
+.+.. ...++++|||++|.+.... ..++.++.+.+||++++
T Consensus 169 ~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 169 EALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 88733 3467899999999987652 25678889999998875
No 64
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.84 E-value=4e-19 Score=138.35 Aligned_cols=248 Identities=15% Similarity=0.239 Sum_probs=162.2
Q ss_pred ccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCh
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSL 174 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~ 174 (386)
...+.+....+..+....... +...++|++||+-++... ...++..|.+.|+.++.+|++|.|+|.+.-.+ ..+
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~t---gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~ 85 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHET---GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNY 85 (269)
T ss_pred eeEEEeccCCCchhhcceecc---CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-Ccc
Confidence 444556666666665544322 335699999999876654 57789999999999999999999999876433 255
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhh-h
Q 016589 175 DHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPL-F 253 (386)
Q Consensus 175 ~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~-~ 253 (386)
...++|+..+++++....- .--+++|||-||.+++. +|+++++ +.-+|.+++-++...... ..+.+. +
T Consensus 86 ~~eadDL~sV~q~~s~~nr-~v~vi~gHSkGg~Vvl~----ya~K~~d----~~~viNcsGRydl~~~I~--eRlg~~~l 154 (269)
T KOG4667|consen 86 NTEADDLHSVIQYFSNSNR-VVPVILGHSKGGDVVLL----YASKYHD----IRNVINCSGRYDLKNGIN--ERLGEDYL 154 (269)
T ss_pred cchHHHHHHHHHHhccCce-EEEEEEeecCccHHHHH----HHHhhcC----chheEEcccccchhcchh--hhhcccHH
Confidence 6667999999999876431 11358999999999999 9999997 777888887766543221 011111 1
Q ss_pred hhhcCCccccCCC-CCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCC--CccEEEEeeCCCCcc
Q 016589 254 SLVVPKYQFKGAN-KRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSV--SVPFFVLHGTGDKVT 330 (386)
Q Consensus 254 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~lii~G~~D~~v 330 (386)
.++...-.+.... +........++.+.. +...+..+...+| +||+|-+||..|.+|
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlmd---------------------rLntd~h~aclkId~~C~VLTvhGs~D~IV 213 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLMD---------------------RLNTDIHEACLKIDKQCRVLTVHGSEDEIV 213 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHHH---------------------HHhchhhhhhcCcCccCceEEEeccCCcee
Confidence 1111111010000 011111111111111 1112233333334 799999999999999
Q ss_pred ChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhcCCc
Q 016589 331 DPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLGCSI 384 (386)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~~ 384 (386)
|.+.+.++++.+++ .+++++||++|.+.. ...+.......|.+.+.+.+.
T Consensus 214 Pve~AkefAk~i~n--H~L~iIEgADHnyt~--~q~~l~~lgl~f~k~r~n~s~ 263 (269)
T KOG4667|consen 214 PVEDAKEFAKIIPN--HKLEIIEGADHNYTG--HQSQLVSLGLEFIKTRINESN 263 (269)
T ss_pred echhHHHHHHhccC--CceEEecCCCcCccc--hhhhHhhhcceeEEeeeccCc
Confidence 99999999999988 899999999997654 456666677777766554443
No 65
>PRK11460 putative hydrolase; Provisional
Probab=99.84 E-value=5.8e-19 Score=148.50 Aligned_cols=180 Identities=13% Similarity=0.118 Sum_probs=123.7
Q ss_pred CCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC----------CCC---ChHHHHHHHHHHHH
Q 016589 120 GELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG----------YVP---SLDHVVADTGAFLE 186 (386)
Q Consensus 120 ~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~----------~~~---~~~~~~~d~~~~l~ 186 (386)
.+..|+||++||++++...|..+++.|.+.++.+..++++|...+..... ... ......+.+.++++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 45578999999999999999999999987766666666666532211100 000 12233344555556
Q ss_pred HHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccC
Q 016589 187 KIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKG 264 (386)
Q Consensus 187 ~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (386)
++..+. +..+++++|||+||.+++. ++..+|+ .+.+++..++.....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~----~a~~~~~---~~~~vv~~sg~~~~~------------------------ 141 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALE----AVKAEPG---LAGRVIAFSGRYASL------------------------ 141 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHH----HHHhCCC---cceEEEEeccccccc------------------------
Confidence 554443 3357999999999999999 8888887 566677665532100
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhc
Q 016589 265 ANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAAS 344 (386)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~ 344 (386)
......+.|+++++|++|+++|.+.++++.+.+..
T Consensus 142 ---------------------------------------------~~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~ 176 (232)
T PRK11460 142 ---------------------------------------------PETAPTATTIHLIHGGEDPVIDVAHAVAAQEALIS 176 (232)
T ss_pred ---------------------------------------------cccccCCCcEEEEecCCCCccCHHHHHHHHHHHHH
Confidence 00012367999999999999999999999888865
Q ss_pred C--CCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 345 R--FKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 345 ~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
. +.++++++++||.+.. +..+.+.+||.+.+
T Consensus 177 ~g~~~~~~~~~~~gH~i~~-----~~~~~~~~~l~~~l 209 (232)
T PRK11460 177 LGGDVTLDIVEDLGHAIDP-----RLMQFALDRLRYTV 209 (232)
T ss_pred CCCCeEEEEECCCCCCCCH-----HHHHHHHHHHHHHc
Confidence 3 3567888999997643 34566666766655
No 66
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.83 E-value=4.4e-20 Score=154.26 Aligned_cols=201 Identities=21% Similarity=0.213 Sum_probs=134.2
Q ss_pred HHHHHHHHHhCCCeEEEeCCCCCCCCCCC---CCCCCChHHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhh
Q 016589 139 YAQFARQLTSCNFGVYAMDWIGHGGSDGL---HGYVPSLDHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRT 213 (386)
Q Consensus 139 ~~~~~~~L~~~G~~vi~~D~~G~G~S~~~---~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~ 213 (386)
|......|+++||.|+.+|+||.+..... ......-...++|+.++++++..+. +.++|+++|+|+||++++.
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~-- 80 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL-- 80 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH--
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch--
Confidence 45667889999999999999998754211 0111133456899999999997765 3458999999999999999
Q ss_pred hhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCc
Q 016589 214 FVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPI 293 (386)
Q Consensus 214 ~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (386)
++.++|+ ++++++..+|..+..........+... .......+..
T Consensus 81 --~~~~~~~---~f~a~v~~~g~~d~~~~~~~~~~~~~~--------------------------~~~~~~~~~~----- 124 (213)
T PF00326_consen 81 --AATQHPD---RFKAAVAGAGVSDLFSYYGTTDIYTKA--------------------------EYLEYGDPWD----- 124 (213)
T ss_dssp --HHHHTCC---GSSEEEEESE-SSTTCSBHHTCCHHHG--------------------------HHHHHSSTTT-----
T ss_pred --hhcccce---eeeeeeccceecchhcccccccccccc--------------------------cccccCccch-----
Confidence 7777999 899999999987665332211000000 0000000000
Q ss_pred chhHHHHHHHHHHHHHhhccC--CCccEEEEeeCCCCccChHHHHHHHHHhhcC--CCcEEEcCCCCCcccCCccHHHHH
Q 016589 294 RVRTGHEILRLSSYLKRNFKS--VSVPFFVLHGTGDKVTDPLASQDLYNEAASR--FKDIKLYEGLLHDLLFELERDEVA 369 (386)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~--i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~ 369 (386)
..+.+... .....+.+ +++|+|+++|++|..||+..+.++++++... +.+++++|++||.+.......+..
T Consensus 125 ----~~~~~~~~-s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~ 199 (213)
T PF00326_consen 125 ----NPEFYREL-SPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWY 199 (213)
T ss_dssp ----SHHHHHHH-HHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHH
T ss_pred ----hhhhhhhh-ccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHH
Confidence 00001000 11333445 7899999999999999999999999988753 367888999999766554667889
Q ss_pred HHHHHHHhhhhcC
Q 016589 370 QDIIVWLEKKLGC 382 (386)
Q Consensus 370 ~~i~~fl~~~~~~ 382 (386)
+.+.+|++++++.
T Consensus 200 ~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 200 ERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHTT-
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999864
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.83 E-value=1.9e-19 Score=152.59 Aligned_cols=128 Identities=23% Similarity=0.300 Sum_probs=103.6
Q ss_pred eccCCceEEEEEecCCCCCCceEEEEECCCCCC----hhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHH
Q 016589 103 FGVKRNALFCRSWIPVSGELKGILIIIHGLNEH----SGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVV 178 (386)
Q Consensus 103 ~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~----~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 178 (386)
.+.....++...+.|....++|+||++||+++. ...|..+++.|+++||.|+++|+||||.|++.... .+++.++
T Consensus 5 l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~~~~ 83 (266)
T TIGR03101 5 LDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWDVWK 83 (266)
T ss_pred ecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHHHHH
Confidence 334444566666666655557899999999864 34577789999999999999999999999765432 3788889
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 179 ADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 179 ~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
+|+..+++++... +..+++++||||||.+++. ++.++|+ +++++|+++|....
T Consensus 84 ~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~----~A~~~p~---~v~~lVL~~P~~~g 136 (266)
T TIGR03101 84 EDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALD----AANPLAA---KCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHH----HHHhCcc---ccceEEEeccccch
Confidence 9999999998765 3568999999999999999 8999998 89999999998664
No 68
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.83 E-value=1.3e-19 Score=167.02 Aligned_cols=244 Identities=14% Similarity=0.073 Sum_probs=145.3
Q ss_pred EEEEEecCCCC-CCceEEEEECCCCCChhhHH-----HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHH-HHHH
Q 016589 110 LFCRSWIPVSG-ELKGILIIIHGLNEHSGRYA-----QFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVV-ADTG 182 (386)
Q Consensus 110 l~~~~~~p~~~-~~~p~vv~lHG~~~~~~~~~-----~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~d~~ 182 (386)
+....|.|... ..+++||++||+......++ .+++.|.++||+|+++|++|+|.+.... ++++++ +++.
T Consensus 174 ~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~----~~ddY~~~~i~ 249 (532)
T TIGR01838 174 FQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK----TFDDYIRDGVI 249 (532)
T ss_pred EEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC----ChhhhHHHHHH
Confidence 34445556543 35789999999987777664 7999999999999999999999875432 344555 4588
Q ss_pred HHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcC-CccccceeEEEEcCcccccCCCCchhhhH--------hhh-
Q 016589 183 AFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASY-PHIEAMLEGIVLSAPALRVEPAHPIVGAV--------APL- 252 (386)
Q Consensus 183 ~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~-p~~~~~v~~lvl~~p~~~~~~~~~~~~~~--------~~~- 252 (386)
++++.+....+..+++++|||+||.++..++..+++.. ++ +|+++++++...++.......... ...
T Consensus 250 ~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~---rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~ 326 (532)
T TIGR01838 250 AALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDK---RIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQN 326 (532)
T ss_pred HHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCC---ccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHH
Confidence 88888876666678999999999998633111135555 66 799999998887765432211110 000
Q ss_pred --------------hhhhcCCccccC-CCCCCCCC-CCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHH---------H
Q 016589 253 --------------FSLVVPKYQFKG-ANKRGVPV-SRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSS---------Y 307 (386)
Q Consensus 253 --------------~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 307 (386)
+..+.+...... ........ ...+..+.....|.....+........+++.... .
T Consensus 327 ~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g 406 (532)
T TIGR01838 327 GGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCG 406 (532)
T ss_pred HhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECC
Confidence 000000000000 00000000 0000011111111111111111111111111111 0
Q ss_pred HHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCC
Q 016589 308 LKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFE 362 (386)
Q Consensus 308 ~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 362 (386)
....+++|++|+++++|++|.++|++.++.+.+.+++ .+..+++++||..+.+
T Consensus 407 ~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~--~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 407 VRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGG--PKTFVLGESGHIAGVV 459 (532)
T ss_pred EecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCC--CEEEEECCCCCchHhh
Confidence 1235678899999999999999999999988888875 7788999999997765
No 69
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.82 E-value=1.1e-18 Score=152.09 Aligned_cols=243 Identities=17% Similarity=0.169 Sum_probs=149.8
Q ss_pred CCccccceeEeccCCceEEEEEecCC-CCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCC-CC---
Q 016589 93 VPCRWSTSLFFGVKRNALFCRSWIPV-SGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSD-GL--- 167 (386)
Q Consensus 93 ~~~~~~~~~~~~~~g~~l~~~~~~p~-~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~-~~--- 167 (386)
.......+.|.+.+|.+|+..++.|. ..++.|.||.+||.++....+..... ++..||.|+.+|.||+|... ..
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCcccc
Confidence 34455678889999999999999998 45778999999999998777766543 66889999999999999322 11
Q ss_pred -----C----------CCCCChHHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEE
Q 016589 168 -----H----------GYVPSLDHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGI 230 (386)
Q Consensus 168 -----~----------~~~~~~~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~l 230 (386)
. ...+.+..+..|...+++.+.... +.++|++.|.|+||.+++. +|+..+ +|+++
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~----~aaLd~----rv~~~ 202 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALA----AAALDP----RVKAA 202 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH----HHHHSS----T-SEE
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHH----HHHhCc----cccEE
Confidence 0 111124456788888999887654 3458999999999999999 888888 59999
Q ss_pred EEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhc--CCCCccCCcchhHHHHHHHHHH--
Q 016589 231 VLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYS--DPLVYTGPIRVRTGHEILRLSS-- 306 (386)
Q Consensus 231 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 306 (386)
+...|+...... ..... ... ....+...+.. ++. .....+.+....
T Consensus 203 ~~~vP~l~d~~~------~~~~~---~~~--------------~~y~~~~~~~~~~d~~-------~~~~~~v~~~L~Y~ 252 (320)
T PF05448_consen 203 AADVPFLCDFRR------ALELR---ADE--------------GPYPEIRRYFRWRDPH-------HEREPEVFETLSYF 252 (320)
T ss_dssp EEESESSSSHHH------HHHHT-----S--------------TTTHHHHHHHHHHSCT-------HCHHHHHHHHHHTT
T ss_pred EecCCCccchhh------hhhcC---Ccc--------------ccHHHHHHHHhccCCC-------cccHHHHHHHHhhh
Confidence 998887543110 00000 000 00000000000 000 000011111111
Q ss_pred HHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 307 YLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 307 ~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
+.....++|++|+++-.|-.|.++||......++.++++ +++.++|..||.... +.-.+...+||.++
T Consensus 253 D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~-K~l~vyp~~~He~~~----~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 253 DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGP-KELVVYPEYGHEYGP----EFQEDKQLNFLKEH 320 (320)
T ss_dssp -HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SS-EEEEEETT--SSTTH----HHHHHHHHHHHHH-
T ss_pred hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCC-eeEEeccCcCCCchh----hHHHHHHHHHHhcC
Confidence 235567889999999999999999999999999999864 899999999995432 22267888998764
No 70
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.82 E-value=6.6e-19 Score=177.86 Aligned_cols=244 Identities=15% Similarity=0.218 Sum_probs=148.7
Q ss_pred CceEEEEECCCCCChhhHHHH-----HHHHHhCCCeEEEeCCCCCCCCCCCCCC-CCChHHHHHHHHHHHHHHHHhCCCC
Q 016589 122 LKGILIIIHGLNEHSGRYAQF-----ARQLTSCNFGVYAMDWIGHGGSDGLHGY-VPSLDHVVADTGAFLEKIKLENPTV 195 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~~~~-----~~~L~~~G~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~d~~~~l~~l~~~~~~~ 195 (386)
.+|+||++||++.+...|+.. ++.|.++||+|+++|+ |.++.+..+ ..++.+++..+.++++.+.... ..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~-~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVT-GR 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhh-CC
Confidence 468999999999999999764 8899999999999995 555544332 2467777777777777665443 24
Q ss_pred CEEEEEechhhHHHHhhhhhHhhcC-CccccceeEEEEcCcccccCCCCch--hhhH-hh---h-hhhhcCCccccC---
Q 016589 196 PCFLFGHSTGGAVVLKRTFVQAASY-PHIEAMLEGIVLSAPALRVEPAHPI--VGAV-AP---L-FSLVVPKYQFKG--- 264 (386)
Q Consensus 196 ~i~lvGhS~Gg~~a~~~~~~~a~~~-p~~~~~v~~lvl~~p~~~~~~~~~~--~~~~-~~---~-~~~~~~~~~~~~--- 264 (386)
+++++||||||.+++. +++.+ ++ +|+++|++++..+.....+. .... .. + ...+........
T Consensus 142 ~v~lvG~s~GG~~a~~----~aa~~~~~---~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 214 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQ----AAAYRRSK---DIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMA 214 (994)
T ss_pred ceEEEEEChhHHHHHH----HHHhcCCC---ccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHH
Confidence 7999999999999998 77754 55 79999998877655322110 0000 00 0 000000000000
Q ss_pred ------CCCCC--------CCCCCCH------HHHHHHhcCC-C-CccCCcchhHHHHHHHHHH----HHH---------
Q 016589 265 ------ANKRG--------VPVSRDP------AALLAKYSDP-L-VYTGPIRVRTGHEILRLSS----YLK--------- 309 (386)
Q Consensus 265 ------~~~~~--------~~~~~~~------~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~----~~~--------- 309 (386)
..... .....++ +......... + ...+. ...++.+... ...
T Consensus 215 ~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~----~~~~~~~~~~~~n~~~~g~~~~~~~~ 290 (994)
T PRK07868 215 RTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGP----AISELLKQFIAHNRMMTGGFAINGQM 290 (994)
T ss_pred HHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchH----HHHHHHHHHHHhCcccCceEEECCEE
Confidence 00000 0000000 0000000000 0 00000 1111111111 000
Q ss_pred hhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcE-EEcCCCCCcccCC--ccHHHHHHHHHHHHhhhhcC
Q 016589 310 RNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDI-KLYEGLLHDLLFE--LERDEVAQDIIVWLEKKLGC 382 (386)
Q Consensus 310 ~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~--~~~~~~~~~i~~fl~~~~~~ 382 (386)
..++++++|+|+++|++|.++|++.++.+.+.+++ .++ .+++++||+.++- ..+++++..|.+||+++.+.
T Consensus 291 ~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~--a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 291 VTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPN--AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred cchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 14678999999999999999999999999888876 666 6779999997764 34788999999999988654
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.82 E-value=3.7e-18 Score=147.95 Aligned_cols=226 Identities=15% Similarity=0.120 Sum_probs=136.7
Q ss_pred EeccCCceEEEEEecCCC--CCCceEEEEECCCCCChhhHHHH--HHHHH-hCCCeEEEeCC--CCCCCCCCCC------
Q 016589 102 FFGVKRNALFCRSWIPVS--GELKGILIIIHGLNEHSGRYAQF--ARQLT-SCNFGVYAMDW--IGHGGSDGLH------ 168 (386)
Q Consensus 102 ~~~~~g~~l~~~~~~p~~--~~~~p~vv~lHG~~~~~~~~~~~--~~~L~-~~G~~vi~~D~--~G~G~S~~~~------ 168 (386)
....-+..+.|.+|.|+. .++.|+|+++||++++...|... ...++ +.||.|+++|. +|+|.+....
T Consensus 19 ~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~ 98 (275)
T TIGR02821 19 KSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGK 98 (275)
T ss_pred eccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccC
Confidence 344557778899999864 35679999999999988877542 34454 56999999998 5554332110
Q ss_pred -------------CCCCCh-HHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcC
Q 016589 169 -------------GYVPSL-DHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSA 234 (386)
Q Consensus 169 -------------~~~~~~-~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~ 234 (386)
...+.. ....+++..+++.... .+..+++++||||||.+++. ++.++|+ .++++++++
T Consensus 99 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~----~a~~~p~---~~~~~~~~~ 170 (275)
T TIGR02821 99 GAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFP-LDGERQGITGHSMGGHGALV----IALKNPD---RFKSVSAFA 170 (275)
T ss_pred CccccccCCcCcccccchHHHHHHHHHHHHHHhhCC-CCCCceEEEEEChhHHHHHH----HHHhCcc---cceEEEEEC
Confidence 000111 2224455555543211 12347999999999999999 9999999 899999999
Q ss_pred cccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccC
Q 016589 235 PALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKS 314 (386)
Q Consensus 235 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (386)
|........ .. ...... ...+... ... .... ..+.... .
T Consensus 171 ~~~~~~~~~-~~---~~~~~~--------------------------~l~~~~~-----~~~-~~~~----~~~~~~~-~ 209 (275)
T TIGR02821 171 PIVAPSRCP-WG---QKAFSA--------------------------YLGADEA-----AWR-SYDA----SLLVADG-G 209 (275)
T ss_pred CccCcccCc-ch---HHHHHH--------------------------Hhccccc-----chh-hcch----HHHHhhc-c
Confidence 886542110 00 000000 0000000 000 0000 0011111 2
Q ss_pred CCccEEEEeeCCCCccCh-HHHHHHHHHhhcC--CCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 315 VSVPFFVLHGTGDKVTDP-LASQDLYNEAASR--FKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 315 i~~P~lii~G~~D~~v~~-~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
...|+++.+|+.|..+|. .....+.+.+... ..++.++||.+|.+.. ...+....++|..++
T Consensus 210 ~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~---~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 210 RHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF---IASFIADHLRHHAER 274 (275)
T ss_pred cCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh---HHHhHHHHHHHHHhh
Confidence 467999999999999998 4555565555433 3577888999997653 455667777777654
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=99.81 E-value=8.7e-18 Score=145.81 Aligned_cols=210 Identities=20% Similarity=0.208 Sum_probs=130.5
Q ss_pred ccCCceEEEEEecCCC--CCCceEEEEECCCCCChhhHHH---HHHHHHhCCCeEEEeCCCCCCC-----CCC-----CC
Q 016589 104 GVKRNALFCRSWIPVS--GELKGILIIIHGLNEHSGRYAQ---FARQLTSCNFGVYAMDWIGHGG-----SDG-----LH 168 (386)
Q Consensus 104 ~~~g~~l~~~~~~p~~--~~~~p~vv~lHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~-----S~~-----~~ 168 (386)
..-|..+.|.+|.|+. +++.|+|+++||++++...|.. +...+...|+.|+.+|..++|. +.. ..
T Consensus 26 ~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 26 STLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred cccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 3557889999998863 2468999999999988876643 3456667799999999887661 110 00
Q ss_pred C-C----------CCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 169 G-Y----------VPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 169 ~-~----------~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
. + ....+...+++...++......+.++++++||||||..++. ++.++|+ ++++++.++|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~----~a~~~p~---~~~~~~~~~~~~ 178 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALT----IYLKNPD---KYKSVSAFAPIA 178 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHH----HHHhCch---hEEEEEEECCcc
Confidence 0 0 00112244555555555433234457999999999999999 9999999 899999999876
Q ss_pred ccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCc
Q 016589 238 RVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSV 317 (386)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 317 (386)
+..... .. ........ ....+.... .++ ......+...++
T Consensus 179 ~~~~~~-~~---~~~~~~~~---------------g~~~~~~~~--~d~-------------------~~~~~~~~~~~~ 218 (283)
T PLN02442 179 NPINCP-WG---QKAFTNYL---------------GSDKADWEE--YDA-------------------TELVSKFNDVSA 218 (283)
T ss_pred CcccCc-hh---hHHHHHHc---------------CCChhhHHH--cCh-------------------hhhhhhccccCC
Confidence 532110 00 00000000 000000000 000 011333456789
Q ss_pred cEEEEeeCCCCccChH-HHHHHHHHhhc--CCCcEEEcCCCCCccc
Q 016589 318 PFFVLHGTGDKVTDPL-ASQDLYNEAAS--RFKDIKLYEGLLHDLL 360 (386)
Q Consensus 318 P~lii~G~~D~~v~~~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 360 (386)
|+++++|++|.+++.. ..+.+++.+.. .+.+++++|+.+|.+.
T Consensus 219 pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 219 TILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred CEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 9999999999999863 34555555433 3367889999999654
No 73
>PLN00021 chlorophyllase
Probab=99.81 E-value=3e-18 Score=149.35 Aligned_cols=206 Identities=17% Similarity=0.183 Sum_probs=137.8
Q ss_pred ceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016589 108 NALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEK 187 (386)
Q Consensus 108 ~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~ 187 (386)
..+.+.++.|...+..|+|||+||++.+...|..+++.|+++||.|+++|++|++.+.. ... .+|..+++++
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~----~~~----i~d~~~~~~~ 108 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG----TDE----IKDAAAVINW 108 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc----hhh----HHHHHHHHHH
Confidence 45678888887767789999999999999999999999999999999999998653211 112 2333344444
Q ss_pred HHHh----------CCCCCEEEEEechhhHHHHhhhhhHhhcCCccc--cceeEEEEcCcccccCCCCchhhhHhhhhhh
Q 016589 188 IKLE----------NPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIE--AMLEGIVLSAPALRVEPAHPIVGAVAPLFSL 255 (386)
Q Consensus 188 l~~~----------~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~--~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 255 (386)
+... .+.++++++|||+||.+++. +|..+++.. .+++++|+++|..........
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~----lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~---------- 174 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFA----LALGKAAVSLPLKFSALIGLDPVDGTSKGKQT---------- 174 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHH----HHhhccccccccceeeEEeeccccccccccCC----------
Confidence 3321 12247999999999999999 888887522 258899999987543210000
Q ss_pred hcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCC-----c-
Q 016589 256 VVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDK-----V- 329 (386)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~-----~- 329 (386)
.+... .+.....++.+|+|++.+..|. .
T Consensus 175 -----------------------------~p~il-----------------~~~~~s~~~~~P~liig~g~~~~~~~~~~ 208 (313)
T PLN00021 175 -----------------------------PPPVL-----------------TYAPHSFNLDIPVLVIGTGLGGEPRNPLF 208 (313)
T ss_pred -----------------------------CCccc-----------------ccCcccccCCCCeEEEecCCCcccccccc
Confidence 00000 0012223478999999999763 2
Q ss_pred ---cChHH-HHHHHHHhhcCCCcEEEcCCCCCcccCCcc----------------------HHHHHHHHHHHHhhhhcC
Q 016589 330 ---TDPLA-SQDLYNEAASRFKDIKLYEGLLHDLLFELE----------------------RDEVAQDIIVWLEKKLGC 382 (386)
Q Consensus 330 ---v~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~----------------------~~~~~~~i~~fl~~~~~~ 382 (386)
.|+.. ..++++.++. ++.+.+++++||+-+.++. .+.+...+..||...+..
T Consensus 209 p~~ap~~~~~~~f~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 209 PPCAPDGVNHAEFFNECKA-PAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred cccCCCCCCHHHHHHhcCC-CeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 22333 3677777764 4778888999999886533 234555678888877643
No 74
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=1.3e-17 Score=139.52 Aligned_cols=206 Identities=17% Similarity=0.188 Sum_probs=159.8
Q ss_pred eeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC----------
Q 016589 100 SLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG---------- 169 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---------- 169 (386)
+.+...+ .++..+...|....+.|.||++|++.+-....+.+++.|++.||.|+++|+.+.........
T Consensus 5 v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~ 83 (236)
T COG0412 5 VTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGL 83 (236)
T ss_pred eEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhh
Confidence 4455555 78888888887766669999999999988899999999999999999999986332221111
Q ss_pred -CCCChHHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchh
Q 016589 170 -YVPSLDHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIV 246 (386)
Q Consensus 170 -~~~~~~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~ 246 (386)
...+......|+.+.++++..+. +..+|.++|+||||.+++. ++...|+ +++.+...|......
T Consensus 84 ~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~----~a~~~~~----v~a~v~fyg~~~~~~----- 150 (236)
T COG0412 84 VERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALL----AATRAPE----VKAAVAFYGGLIADD----- 150 (236)
T ss_pred hccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHH----hhcccCC----ccEEEEecCCCCCCc-----
Confidence 01123677899999999998654 3457999999999999999 7777775 888888766532210
Q ss_pred hhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCC
Q 016589 247 GAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTG 326 (386)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 326 (386)
.....++++|+|+.+|+.
T Consensus 151 --------------------------------------------------------------~~~~~~~~~pvl~~~~~~ 168 (236)
T COG0412 151 --------------------------------------------------------------TADAPKIKVPVLLHLAGE 168 (236)
T ss_pred --------------------------------------------------------------ccccccccCcEEEEeccc
Confidence 112457899999999999
Q ss_pred CCccChHHHHHHHHHhhcC--CCcEEEcCCCCCcccCCc----------cHHHHHHHHHHHHhhhhc
Q 016589 327 DKVTDPLASQDLYNEAASR--FKDIKLYEGLLHDLLFEL----------ERDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 327 D~~v~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~----------~~~~~~~~i~~fl~~~~~ 381 (386)
|..+|......+.+.+... ..++.+|+++.|.++.+. ..+..++.+.+|+++.++
T Consensus 169 D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 169 DPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999988888888765 577899999999888541 257889999999998764
No 75
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.80 E-value=4.2e-18 Score=130.76 Aligned_cols=176 Identities=20% Similarity=0.233 Sum_probs=136.4
Q ss_pred CCCCceEEEEECCCC---CCh--hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 016589 119 SGELKGILIIIHGLN---EHS--GRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENP 193 (386)
Q Consensus 119 ~~~~~p~vv~lHG~~---~~~--~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 193 (386)
+.+..|+.|++|.-+ ++. ..-..++..|.++||.++.+|+||.|.|.+...+ ..-+ .+|..++++|++.+++
T Consensus 24 ~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--GiGE-~~Da~aaldW~~~~hp 100 (210)
T COG2945 24 KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN--GIGE-LEDAAAALDWLQARHP 100 (210)
T ss_pred CCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--Ccch-HHHHHHHHHHHHhhCC
Confidence 346678999999743 332 2356678888999999999999999999886543 3333 7899999999999987
Q ss_pred CCCE-EEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCC
Q 016589 194 TVPC-FLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPV 272 (386)
Q Consensus 194 ~~~i-~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (386)
..+. .+.|+|+|+++++. +|.+.|+ ....+.+.|.....
T Consensus 101 ~s~~~~l~GfSFGa~Ia~~----la~r~~e----~~~~is~~p~~~~~-------------------------------- 140 (210)
T COG2945 101 DSASCWLAGFSFGAYIAMQ----LAMRRPE----ILVFISILPPINAY-------------------------------- 140 (210)
T ss_pred CchhhhhcccchHHHHHHH----HHHhccc----ccceeeccCCCCch--------------------------------
Confidence 7665 78899999999999 8888887 55566666654310
Q ss_pred CCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEc
Q 016589 273 SRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLY 352 (386)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 352 (386)
-...+....+|.++|+|+.|.+++.....++++.. ..+++++
T Consensus 141 -----------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~---~~~~i~i 182 (210)
T COG2945 141 -----------------------------------DFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI---KITVITI 182 (210)
T ss_pred -----------------------------------hhhhccCCCCCceeEecChhhhhcHHHHHHhhcCC---CCceEEe
Confidence 02234556789999999999999998888877763 3788999
Q ss_pred CCCCCcccCCccHHHHHHHHHHHHh
Q 016589 353 EGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 353 ~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
++++|+++. +-..+.+.|.+|+.
T Consensus 183 ~~a~HFF~g--Kl~~l~~~i~~~l~ 205 (210)
T COG2945 183 PGADHFFHG--KLIELRDTIADFLE 205 (210)
T ss_pred cCCCceecc--cHHHHHHHHHHHhh
Confidence 999997765 57888889999984
No 76
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.79 E-value=4.4e-20 Score=156.40 Aligned_cols=209 Identities=21% Similarity=0.157 Sum_probs=125.7
Q ss_pred CeEEEeCCCCCCCCCC---CCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccce
Q 016589 151 FGVYAMDWIGHGGSDG---LHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAML 227 (386)
Q Consensus 151 ~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v 227 (386)
|+|+++|+||+|.|++ .....++.++.++++..+++.+..+. ++++||||||.+++. +|+++|+ +|
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~vG~S~Gg~~~~~----~a~~~p~---~v 69 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKK----INLVGHSMGGMLALE----YAAQYPE---RV 69 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSS----EEEEEETHHHHHHHH----HHHHSGG---GE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCC----eEEEEECCChHHHHH----HHHHCch---hh
Confidence 7899999999999995 44444578888888888888777654 999999999999999 9999999 99
Q ss_pred eEEEEcCccc--ccCCCCchhh--hHhhhhh-h----hcCCc----cccC--CCCCCCCCCCCHHHH--HHHhcCCCCcc
Q 016589 228 EGIVLSAPAL--RVEPAHPIVG--AVAPLFS-L----VVPKY----QFKG--ANKRGVPVSRDPAAL--LAKYSDPLVYT 290 (386)
Q Consensus 228 ~~lvl~~p~~--~~~~~~~~~~--~~~~~~~-~----~~~~~----~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~ 290 (386)
+++|++++.. .......... ....... . ..... .... ............... ...+.......
T Consensus 70 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (230)
T PF00561_consen 70 KKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETD 149 (230)
T ss_dssp EEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHH
T ss_pred cCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHH
Confidence 9999999862 0000000000 0000000 0 00000 0000 000000000000000 00000000000
Q ss_pred CCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHH
Q 016589 291 GPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQ 370 (386)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 370 (386)
................+....+..+++|+++++|++|.++|++....+.+.+++ .++++++++||+.+.+ +++++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~GH~~~~~-~~~~~~~ 226 (230)
T PF00561_consen 150 AFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN--SQLVLIEGSGHFAFLE-GPDEFNE 226 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT--EEEEEETTCCSTHHHH-SHHHHHH
T ss_pred HHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC--CEEEECCCCChHHHhc-CHHhhhh
Confidence 000000000111112234566778999999999999999999999998888877 8999999999999888 8888888
Q ss_pred HHH
Q 016589 371 DII 373 (386)
Q Consensus 371 ~i~ 373 (386)
.|.
T Consensus 227 ~i~ 229 (230)
T PF00561_consen 227 III 229 (230)
T ss_dssp HHH
T ss_pred hhc
Confidence 775
No 77
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.76 E-value=9.6e-18 Score=136.05 Aligned_cols=243 Identities=19% Similarity=0.242 Sum_probs=139.6
Q ss_pred CCceEEEEECCCCCChhhHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEE
Q 016589 121 ELKGILIIIHGLNEHSGRYAQFARQLTS-CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFL 199 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~l 199 (386)
...|+++++||++.+.-.|..+++.|.. ...+|+++|+||||++.-......+.+.+..|+.++++++-.+.+ .+|++
T Consensus 72 t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~iil 150 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELP-PQIIL 150 (343)
T ss_pred CCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCC-CceEE
Confidence 4579999999999999999999999974 367889999999999987666667999999999999999875543 36999
Q ss_pred EEechhhHHHHhhhhhHhh--cCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCcc---------ccCCCCC
Q 016589 200 FGHSTGGAVVLKRTFVQAA--SYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQ---------FKGANKR 268 (386)
Q Consensus 200 vGhS~Gg~~a~~~~~~~a~--~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 268 (386)
|||||||.++.. .|. .-|. +.|+++++-.-... ......+..++......+. ......+
T Consensus 151 VGHSmGGaIav~----~a~~k~lps----l~Gl~viDVVEgtA--meAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~R 220 (343)
T KOG2564|consen 151 VGHSMGGAIAVH----TAASKTLPS----LAGLVVIDVVEGTA--MEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLR 220 (343)
T ss_pred Eeccccchhhhh----hhhhhhchh----hhceEEEEEechHH--HHHHHHHHHHHhcCCccccchhhHHHHHhcccccc
Confidence 999999999988 443 3353 77887776442110 0000111111110000000 0000000
Q ss_pred -CCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHH-HHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCC
Q 016589 269 -GVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILR-LSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRF 346 (386)
Q Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~ 346 (386)
.....-..........+.-.+.-.........++. ....+.+.+-...+|-++|.+..|..- .+.. .-+..+ .
T Consensus 221 n~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LD-kdLt---iGQMQG-k 295 (343)
T KOG2564|consen 221 NRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLD-KDLT---IGQMQG-K 295 (343)
T ss_pred ccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccC-ccee---eeeecc-c
Confidence 00000000000000000000000000000001110 011233444456788888888887652 2211 111222 2
Q ss_pred CcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 347 KDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 347 ~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
-++.+++.+||+.+.+ .|..+...+..|+.++-
T Consensus 296 ~Q~~vL~~~GH~v~ED-~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 296 FQLQVLPLCGHFVHED-SPHKVAECLCVFWIRNR 328 (343)
T ss_pred eeeeeecccCceeccC-CcchHHHHHHHHHhhhc
Confidence 6789999999987766 89999999999987763
No 78
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.76 E-value=3.3e-17 Score=136.46 Aligned_cols=118 Identities=14% Similarity=0.278 Sum_probs=85.2
Q ss_pred EEecCCC-CCCceEEEEECCCCCChhhHH---HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCC-----CChHHHHHHHHH
Q 016589 113 RSWIPVS-GELKGILIIIHGLNEHSGRYA---QFARQLTSCNFGVYAMDWIGHGGSDGLHGYV-----PSLDHVVADTGA 183 (386)
Q Consensus 113 ~~~~p~~-~~~~p~vv~lHG~~~~~~~~~---~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~-----~~~~~~~~d~~~ 183 (386)
.+|.|++ .++.|+||++||++++...+. .+.+.+.+.||.|+++|++|++.+.....+. ........|+.+
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQ 81 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHH
Confidence 4555654 356899999999998877665 3455555679999999999987543211100 011234677888
Q ss_pred HHHHHHHhCC--CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 184 FLEKIKLENP--TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 184 ~l~~l~~~~~--~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
+++++..+.+ .++++++|||+||.+++. ++.++|+ .+.+++.+++..
T Consensus 82 ~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~----~a~~~p~---~~~~~~~~~g~~ 130 (212)
T TIGR01840 82 LIDAVKANYSIDPNRVYVTGLSAGGGMTAV----LGCTYPD---VFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHhcCcChhheEEEEECHHHHHHHH----HHHhCch---hheEEEeecCCc
Confidence 8888876652 347999999999999999 9999998 788887777654
No 79
>PRK10162 acetyl esterase; Provisional
Probab=99.76 E-value=4.7e-16 Score=137.36 Aligned_cols=239 Identities=16% Similarity=0.146 Sum_probs=145.1
Q ss_pred ccceeEeccCCceEEEEEecCCCCCCceEEEEECCCC---CChhhHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCC
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLN---EHSGRYAQFARQLTS-CNFGVYAMDWIGHGGSDGLHGYVP 172 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~---~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~ 172 (386)
.+...+...+| .+..++|.|.. ...|+||++||.+ ++...|..++..|++ .|+.|+.+|||...+.
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-------- 126 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQP-DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-------- 126 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCC-CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC--------
Confidence 44555666666 58888898854 3468999999977 556678888999986 5999999999965433
Q ss_pred ChHHHHHHHHHHHHHHHHh---C--CCCCEEEEEechhhHHHHhhhhhHhhcCCcc---ccceeEEEEcCcccccCCCCc
Q 016589 173 SLDHVVADTGAFLEKIKLE---N--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHI---EAMLEGIVLSAPALRVEPAHP 244 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~---~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~---~~~v~~lvl~~p~~~~~~~~~ 244 (386)
.+....+|+.++++++... . +..+++++|+|+||++++. ++....+. ..++.++++++|..+......
T Consensus 127 ~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~----~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s 202 (318)
T PRK10162 127 RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALA----SALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS 202 (318)
T ss_pred CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHH----HHHHHHhcCCCccChhheEEECCccCCCCChh
Confidence 2223456777777766432 2 3357999999999999998 55432111 026889999999876431110
Q ss_pred hhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHH---HHHhc-CCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEE
Q 016589 245 IVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAAL---LAKYS-DPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFF 320 (386)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 320 (386)
... .... . ........ ...+. +......+.. .. ....+.+--.|++
T Consensus 203 -~~~-------~~~~----------~-~~l~~~~~~~~~~~y~~~~~~~~~p~~-~p----------~~~~l~~~lPp~~ 252 (318)
T PRK10162 203 -RRL-------LGGV----------W-DGLTQQDLQMYEEAYLSNDADRESPYY-CL----------FNNDLTRDVPPCF 252 (318)
T ss_pred -HHH-------hCCC----------c-cccCHHHHHHHHHHhCCCccccCCccc-Cc----------chhhhhcCCCCeE
Confidence 000 0000 0 00001111 11111 1000000000 00 0112212234999
Q ss_pred EEeeCCCCccChHHHHHHHHHhhcC--CCcEEEcCCCCCcccCC----ccHHHHHHHHHHHHhhhhc
Q 016589 321 VLHGTGDKVTDPLASQDLYNEAASR--FKDIKLYEGLLHDLLFE----LERDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 321 ii~G~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~----~~~~~~~~~i~~fl~~~~~ 381 (386)
+++|+.|.+.+ ....+.+++... .+++++++|..|.+... +..++..+.+.+||+++++
T Consensus 253 i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 253 IAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred EEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 99999999875 456666666543 46788999999987532 2467788899999988764
No 80
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.76 E-value=6.7e-17 Score=139.54 Aligned_cols=250 Identities=23% Similarity=0.267 Sum_probs=141.3
Q ss_pred CceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 016589 107 RNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSC--NFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAF 184 (386)
Q Consensus 107 g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~ 184 (386)
+..+.|...+.. .|+|+++||++++...|......+... .|+++++|+||||.|. .. .+.....++++..+
T Consensus 9 ~~~~~~~~~~~~----~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~ 81 (282)
T COG0596 9 GVRLAYREAGGG----GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAAL 81 (282)
T ss_pred CeEEEEeecCCC----CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHH
Confidence 344555554433 459999999999999988844444332 1999999999999997 11 12444457888888
Q ss_pred HHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCC----------chhh--hHhhh
Q 016589 185 LEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAH----------PIVG--AVAPL 252 (386)
Q Consensus 185 l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~----------~~~~--~~~~~ 252 (386)
++.+.... ++++|||+||.+++. ++.++|+ +++++|++++........ .... .....
T Consensus 82 ~~~~~~~~----~~l~G~S~Gg~~~~~----~~~~~p~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (282)
T COG0596 82 LDALGLEK----VVLVGHSMGGAVALA----LALRHPD---RVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLG 150 (282)
T ss_pred HHHhCCCc----eEEEEecccHHHHHH----HHHhcch---hhheeeEecCCCCcccccCccccCccccchhhhhhhhhc
Confidence 88666543 999999999999999 9999999 899999998765411000 0000 00000
Q ss_pred h--hhhcCCccccC-CCCCCC-----CCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEee
Q 016589 253 F--SLVVPKYQFKG-ANKRGV-----PVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHG 324 (386)
Q Consensus 253 ~--~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 324 (386)
. ........... ...... .................................. .........+++|+++++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g 229 (282)
T COG0596 151 LDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLD-RDLRAALARITVPTLIIHG 229 (282)
T ss_pred cchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccc-cccchhhccCCCCeEEEec
Confidence 0 00000000000 000000 0000000000000000000000000000000000 0123345667899999999
Q ss_pred CCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 325 TGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 325 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
++|.+.|......+.+..+. ..++.+++++||..+.+ +++.+.+.+.+|+.
T Consensus 230 ~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~-~p~~~~~~i~~~~~ 280 (282)
T COG0596 230 EDDPVVPAELARRLAAALPN-DARLVVIPGAGHFPHLE-APEAFAAALLAFLE 280 (282)
T ss_pred CCCCcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhh-cHHHHHHHHHHHHh
Confidence 99977776655555555553 47899999999999988 88888888887543
No 81
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.75 E-value=4.1e-17 Score=154.86 Aligned_cols=129 Identities=16% Similarity=0.101 Sum_probs=104.8
Q ss_pred eccCCceEEEEEecCCCCCCceEEEEECCCCCChh----hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHH
Q 016589 103 FGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSG----RYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVV 178 (386)
Q Consensus 103 ~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~----~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 178 (386)
.+.||.+|++.++.|...++.|+||++||++.+.. ........|+++||.|+++|+||+|.|.+..... + ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-cccc
Confidence 46789999999999976567899999999997653 2223557788999999999999999998754332 2 5678
Q ss_pred HHHHHHHHHHHHhC-CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccC
Q 016589 179 ADTGAFLEKIKLEN-PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 179 ~d~~~~l~~l~~~~-~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~ 240 (386)
+|+.++++++..+. .+.+++++|||+||.+++. +|+.+|+ +++++|..++..+..
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~----~a~~~~~---~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLL----AAVLQPP---ALRAIAPQEGVWDLY 135 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHH----HhccCCC---ceeEEeecCcccchh
Confidence 99999999997763 3458999999999999999 8888887 899999988776543
No 82
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.73 E-value=2.7e-16 Score=131.35 Aligned_cols=185 Identities=21% Similarity=0.235 Sum_probs=114.2
Q ss_pred CCCCceEEEEECCCCCChhhHHHHHH-HHHhCCCeEEEeCCCC------CCC---CCC-----CCCC---CCChHHHHHH
Q 016589 119 SGELKGILIIIHGLNEHSGRYAQFAR-QLTSCNFGVYAMDWIG------HGG---SDG-----LHGY---VPSLDHVVAD 180 (386)
Q Consensus 119 ~~~~~p~vv~lHG~~~~~~~~~~~~~-~L~~~G~~vi~~D~~G------~G~---S~~-----~~~~---~~~~~~~~~d 180 (386)
..+..|+||++||+|++...+..+.. .+......++.++-|- .|. +-- .... ...+.+..+.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 34668999999999999976666655 2223457777765542 122 110 0000 1123334455
Q ss_pred HHHHHHHHHHhC-CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCC
Q 016589 181 TGAFLEKIKLEN-PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPK 259 (386)
Q Consensus 181 ~~~~l~~l~~~~-~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 259 (386)
+.++++...... +..++++.|+|+||++++. ++.++|+ .+.++|.+++........
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~----~~l~~p~---~~~gvv~lsG~~~~~~~~---------------- 146 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALY----LALRYPE---PLAGVVALSGYLPPESEL---------------- 146 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHH----HHHCTSS---TSSEEEEES---TTGCCC----------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHH----HHHHcCc---CcCEEEEeeccccccccc----------------
Confidence 666666544332 4558999999999999999 9999999 899999999875432110
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccC-CCccEEEEeeCCCCccChHHHHHH
Q 016589 260 YQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKS-VSVPFFVLHGTGDKVTDPLASQDL 338 (386)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~lii~G~~D~~v~~~~~~~~ 338 (386)
...... -++|++++||++|+++|.+.++..
T Consensus 147 -------------------------------------------------~~~~~~~~~~pi~~~hG~~D~vvp~~~~~~~ 177 (216)
T PF02230_consen 147 -------------------------------------------------EDRPEALAKTPILIIHGDEDPVVPFEWAEKT 177 (216)
T ss_dssp -------------------------------------------------HCCHCCCCTS-EEEEEETT-SSSTHHHHHHH
T ss_pred -------------------------------------------------cccccccCCCcEEEEecCCCCcccHHHHHHH
Confidence 000111 168999999999999999999988
Q ss_pred HHHhhcCC--CcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 339 YNEAASRF--KDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 339 ~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
.+.+.+.+ .+++.|+|.||.. ..+..+.+.+||++++
T Consensus 178 ~~~L~~~~~~v~~~~~~g~gH~i-----~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 178 AEFLKAAGANVEFHEYPGGGHEI-----SPEELRDLREFLEKHI 216 (216)
T ss_dssp HHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH-
T ss_pred HHHHHhcCCCEEEEEcCCCCCCC-----CHHHHHHHHHHHhhhC
Confidence 88887643 5778999999965 3456788999998763
No 83
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.72 E-value=2.2e-15 Score=123.89 Aligned_cols=127 Identities=19% Similarity=0.286 Sum_probs=104.2
Q ss_pred ceeEeccCCceEEEEEec-C--CCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChH
Q 016589 99 TSLFFGVKRNALFCRSWI-P--VSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLD 175 (386)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~-p--~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 175 (386)
...+...+|..+...... . +.+++..+||-+||.+|+...|+.+.+.|.+.|.++|.++|||+|.+++++...++-.
T Consensus 8 ~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~ 87 (297)
T PF06342_consen 8 LVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNE 87 (297)
T ss_pred EEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChH
Confidence 344555556555433221 1 2335567999999999999999999999999999999999999999999888878888
Q ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 176 HVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
+...-+.++++.+.... +++.+|||.||-.|+. ++..+| +.|+++++|..
T Consensus 88 er~~~~~~ll~~l~i~~---~~i~~gHSrGcenal~----la~~~~-----~~g~~lin~~G 137 (297)
T PF06342_consen 88 ERQNFVNALLDELGIKG---KLIFLGHSRGCENALQ----LAVTHP-----LHGLVLINPPG 137 (297)
T ss_pred HHHHHHHHHHHHcCCCC---ceEEEEeccchHHHHH----HHhcCc-----cceEEEecCCc
Confidence 88899999999988774 7999999999999999 899886 56899988764
No 84
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=7.3e-16 Score=131.64 Aligned_cols=261 Identities=18% Similarity=0.220 Sum_probs=159.5
Q ss_pred CCceEEEEEecCCCCCCceEEEEECCCCCChhhHH-------HHHHHHHh-------CCCeEEEeCCCCCC-CCCCCC--
Q 016589 106 KRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYA-------QFARQLTS-------CNFGVYAMDWIGHG-GSDGLH-- 168 (386)
Q Consensus 106 ~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~-------~~~~~L~~-------~G~~vi~~D~~G~G-~S~~~~-- 168 (386)
++.++.|..|+..+....++|+++|+++++..... .+.+.+.. ..|-||+.|-.|.+ .|++|.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 45678899999877666789999999998665433 13444433 24899999999876 454442
Q ss_pred --C--------CCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccc
Q 016589 169 --G--------YVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 169 --~--------~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
. ...++.+++.--..++++++.+. -..++|-||||+.++. ++..+|+ +|..+|.++....
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~---l~avvGgSmGGMqale----Wa~~yPd---~V~~~i~ia~~~r 183 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKK---LAAVVGGSMGGMQALE----WAIRYPD---RVRRAIPIATAAR 183 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcce---EeeeeccChHHHHHHH----HHHhChH---HHhhhheeccccc
Confidence 1 11355666666666777777654 1349999999999999 9999999 8888888777655
Q ss_pred cCCCCchhhhHhhhhhhhcCCccccCCCCCCCC-------------CCCCHHHHHHHhcC-----CCC------------
Q 016589 239 VEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVP-------------VSRDPAALLAKYSD-----PLV------------ 288 (386)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~-----~~~------------ 288 (386)
..+..-......+..-...|.+.-..+.....+ ....++.+...+.. +..
T Consensus 184 ~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL 263 (368)
T COG2021 184 LSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYL 263 (368)
T ss_pred CCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHH
Confidence 443322222222222222233322111110000 11111222111111 000
Q ss_pred ------ccCCcchhHHHHHHHHH---------HHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEc-
Q 016589 289 ------YTGPIRVRTGHEILRLS---------SYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLY- 352 (386)
Q Consensus 289 ------~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~- 352 (386)
+........+..+.+.. .++.+.++++++|++++.-+.|.++|++..++..+.++.... ++++
T Consensus 264 ~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~ 342 (368)
T COG2021 264 DYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREID 342 (368)
T ss_pred HHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEec
Confidence 00001111111111111 123445788999999999999999999999999999987433 6555
Q ss_pred CCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 353 EGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 353 ~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
...||..++. +.+.+...|..||+.
T Consensus 343 S~~GHDaFL~-e~~~~~~~i~~fL~~ 367 (368)
T COG2021 343 SPYGHDAFLV-ESEAVGPLIRKFLAL 367 (368)
T ss_pred CCCCchhhhc-chhhhhHHHHHHhhc
Confidence 4679998887 677788999999864
No 85
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.72 E-value=9.8e-16 Score=121.07 Aligned_cols=257 Identities=17% Similarity=0.182 Sum_probs=157.5
Q ss_pred eeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC--CCCChHH-
Q 016589 100 SLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG--YVPSLDH- 176 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~--~~~~~~~- 176 (386)
..+...||..+....|.. .++....++.-.+++.....|+.++..++++||.|+.+||||.|.|+.... ..+.+.+
T Consensus 8 ~~l~~~DG~~l~~~~~pA-~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPA-DGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccccCCCccCccccccC-CCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 567788999998888844 333334666666777777789999999999999999999999999975532 2234444
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhH--hhhhh
Q 016589 177 VVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAV--APLFS 254 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~--~~~~~ 254 (386)
...|+.+.++.++...+..+...+|||+||.+.-. +.+++. ..+....+..............+ ..+..
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL-----~~~~~k----~~a~~vfG~gagwsg~m~~~~~l~~~~l~~ 157 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALGL-----LGQHPK----YAAFAVFGSGAGWSGWMGLRERLGAVLLWN 157 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeecc-----cccCcc----cceeeEeccccccccchhhhhcccceeecc
Confidence 45799999999998777789999999999998766 666663 33333322221121111110000 00000
Q ss_pred hhcCCccc-cCCCCC-CCCCC-CCHHH----HHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCC
Q 016589 255 LVVPKYQF-KGANKR-GVPVS-RDPAA----LLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGD 327 (386)
Q Consensus 255 ~~~~~~~~-~~~~~~-~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D 327 (386)
...+...+ ...... ..-.. ..+.. .......+..+..... .....+..+.+++|+.++...+|
T Consensus 158 lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~----------~~~~~q~yaaVrtPi~~~~~~DD 227 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA----------MRNYRQVYAAVRTPITFSRALDD 227 (281)
T ss_pred ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChh----------HhHHHHHHHHhcCceeeeccCCC
Confidence 00010000 000000 00000 11111 1111112211111111 11235556778999999999999
Q ss_pred CccChHHHHHHHHHhhcCCCcEEEcCC----CCCcccCCccHHHHHHHHHHHH
Q 016589 328 KVTDPLASQDLYNEAASRFKDIKLYEG----LLHDLLFELERDEVAQDIIVWL 376 (386)
Q Consensus 328 ~~v~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~~~~~~~~~~~~i~~fl 376 (386)
+.+|+...+.+.+-..+...+...++. -||+..+.+..|..++.+.+|+
T Consensus 228 ~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 228 PWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred CcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 999999999999999886667777754 5998877633488888888886
No 86
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.72 E-value=9.3e-16 Score=124.18 Aligned_cols=268 Identities=18% Similarity=0.172 Sum_probs=174.1
Q ss_pred hchHHHHHHHHHHhhhhcc-----cccCCCCCCccccceeEeccCCceEEEEEecCCCC-CCceEEEEECCCCCChhhHH
Q 016589 67 REDEDTMRRRALAEDLKMG-----FETDDGEVPCRWSTSLFFGVKRNALFCRSWIPVSG-ELKGILIIIHGLNEHSGRYA 140 (386)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~-~~~p~vv~lHG~~~~~~~~~ 140 (386)
+.+.+.-+...++..+..- .+..-.......-..+|...+|.+|+.++..|... +..|.||-.||++++...|.
T Consensus 21 P~DFdeFW~~~l~e~~~~~~~p~l~~~d~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~ 100 (321)
T COG3458 21 PDDFDEFWKKTLEEARKVPPEPVLERSDFTLPRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWH 100 (321)
T ss_pred CCcHHHHHHHHHHHHhcCCCCceEEeccccCCceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcc
Confidence 3445555666665554330 01111112233456788999999999999999876 67899999999999988876
Q ss_pred HHHHHHHhCCCeEEEeCCCCCCCCCC----CCC----------------CCCChHHHHHHHHHHHHHHHHhC--CCCCEE
Q 016589 141 QFARQLTSCNFGVYAMDWIGHGGSDG----LHG----------------YVPSLDHVVADTGAFLEKIKLEN--PTVPCF 198 (386)
Q Consensus 141 ~~~~~L~~~G~~vi~~D~~G~G~S~~----~~~----------------~~~~~~~~~~d~~~~l~~l~~~~--~~~~i~ 198 (386)
.+...- ..||.|+.+|.||.|.|.. ++. ..+-+.....|+..+++.+..-. +.++|.
T Consensus 101 ~~l~wa-~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~ 179 (321)
T COG3458 101 DMLHWA-VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIG 179 (321)
T ss_pred cccccc-ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheE
Confidence 665443 6699999999999998732 111 11123445667777777775443 345899
Q ss_pred EEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHH
Q 016589 199 LFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAA 278 (386)
Q Consensus 199 lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (386)
+.|.|+||.+++. .++..| ++++++..-|..+.-+..... .......+
T Consensus 180 v~G~SqGGglala----aaal~~----rik~~~~~~Pfl~df~r~i~~------------------------~~~~~yde 227 (321)
T COG3458 180 VTGGSQGGGLALA----AAALDP----RIKAVVADYPFLSDFPRAIEL------------------------ATEGPYDE 227 (321)
T ss_pred EeccccCchhhhh----hhhcCh----hhhcccccccccccchhheee------------------------cccCcHHH
Confidence 9999999999999 788888 699999988886543211100 00011111
Q ss_pred HHHHhcCCCCccCCcchhHHHHHHHHHH--HHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCC
Q 016589 279 LLAKYSDPLVYTGPIRVRTGHEILRLSS--YLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLL 356 (386)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~g 356 (386)
+..++..... . -.+.+.... +......++++|+|+..|-.|++|||......++++.. .+++.++|.-+
T Consensus 228 i~~y~k~h~~----~----e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~a 298 (321)
T COG3458 228 IQTYFKRHDP----K----EAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFA 298 (321)
T ss_pred HHHHHHhcCc----h----HHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccc
Confidence 1111111000 0 001111111 23455678999999999999999999999999999985 37888888877
Q ss_pred CcccCCccHHHHHHHHHHHHhhhh
Q 016589 357 HDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 357 H~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
|..... -..+.+..|++...
T Consensus 299 He~~p~----~~~~~~~~~l~~l~ 318 (321)
T COG3458 299 HEGGPG----FQSRQQVHFLKILF 318 (321)
T ss_pred cccCcc----hhHHHHHHHHHhhc
Confidence 865433 33556777877654
No 87
>PRK10115 protease 2; Provisional
Probab=99.70 E-value=3e-15 Score=144.38 Aligned_cols=244 Identities=14% Similarity=0.084 Sum_probs=156.7
Q ss_pred cccceeEeccCCceEEE-EEecCC--CCCCceEEEEECCCCCChh--hHHHHHHHHHhCCCeEEEeCCCCCCCCCCC---
Q 016589 96 RWSTSLFFGVKRNALFC-RSWIPV--SGELKGILIIIHGLNEHSG--RYAQFARQLTSCNFGVYAMDWIGHGGSDGL--- 167 (386)
Q Consensus 96 ~~~~~~~~~~~g~~l~~-~~~~p~--~~~~~p~vv~lHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~--- 167 (386)
..+.+.+.+.||.+|.+ .++.|. ..++.|+||++||..+... .|......|+++||.|+.+++||-|+-...
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 56778889999999997 555453 2345799999999776653 377777788999999999999997654321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCch
Q 016589 168 HGYVPSLDHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPI 245 (386)
Q Consensus 168 ~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~ 245 (386)
.+....-....+|+.++++++..+. +..++.+.|.|.||.++.. .+.++|+ +++++|...|..+.......
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~----~~~~~Pd---lf~A~v~~vp~~D~~~~~~~ 567 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGV----AINQRPE---LFHGVIAQVPFVDVVTTMLD 567 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHH----HHhcChh---heeEEEecCCchhHhhhccc
Confidence 0000011134688888888887654 3458999999999999999 7778999 89999999998775321000
Q ss_pred hhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCcc-EEEEee
Q 016589 246 VGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVP-FFVLHG 324 (386)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~G 324 (386)
...+... ......+.+ .+++.. +.+... ....++.+++.| +|+++|
T Consensus 568 ---------~~~p~~~-~~~~e~G~p--~~~~~~--------------------~~l~~~-SP~~~v~~~~~P~lLi~~g 614 (686)
T PRK10115 568 ---------ESIPLTT-GEFEEWGNP--QDPQYY--------------------EYMKSY-SPYDNVTAQAYPHLLVTTG 614 (686)
T ss_pred ---------CCCCCCh-hHHHHhCCC--CCHHHH--------------------HHHHHc-CchhccCccCCCceeEEec
Confidence 0000000 000000000 111111 111000 124456777889 667799
Q ss_pred CCCCccChHHHHHHHHHhhc--CCCcEEEc---CCCCCcccCCccHHHH---HHHHHHHHhhhhc
Q 016589 325 TGDKVTDPLASQDLYNEAAS--RFKDIKLY---EGLLHDLLFELERDEV---AQDIIVWLEKKLG 381 (386)
Q Consensus 325 ~~D~~v~~~~~~~~~~~~~~--~~~~~~~~---~~~gH~~~~~~~~~~~---~~~i~~fl~~~~~ 381 (386)
.+|.-||+.++.+++.++.. .+.+++++ +++||... + ...+. ......|+-..++
T Consensus 615 ~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~-~-~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 615 LHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK-S-GRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred CCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC-c-CHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999998865 33566777 89999733 2 23222 2334666666554
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.69 E-value=1.9e-16 Score=138.96 Aligned_cols=236 Identities=16% Similarity=0.170 Sum_probs=132.2
Q ss_pred cceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHH-HHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHH
Q 016589 98 STSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQ-FARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDH 176 (386)
Q Consensus 98 ~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~-~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~ 176 (386)
+.+.+.-. |.+|..++..|...++.|+||++.|..+-...+.. +.+.|+.+|+.++++|.||.|.|...+-. .+.+.
T Consensus 166 ~~v~iP~e-g~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~ 243 (411)
T PF06500_consen 166 EEVEIPFE-GKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSR 243 (411)
T ss_dssp EEEEEEET-TCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCH
T ss_pred EEEEEeeC-CcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHH
Confidence 34444444 47888888888877888999999999988877554 45678899999999999999998643211 23333
Q ss_pred HHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCch-hhhHhhh-
Q 016589 177 VVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPI-VGAVAPL- 252 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~-~~~~~~~- 252 (386)
... ++++++.... +..+|.++|.|+||++|.+ +|..+++ |++++|..+|.+..--.... .......
T Consensus 244 l~~---aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvR----lA~le~~---RlkavV~~Ga~vh~~ft~~~~~~~~P~my 313 (411)
T PF06500_consen 244 LHQ---AVLDYLASRPWVDHTRVGAWGFSFGGYYAVR----LAALEDP---RLKAVVALGAPVHHFFTDPEWQQRVPDMY 313 (411)
T ss_dssp HHH---HHHHHHHHSTTEEEEEEEEEEETHHHHHHHH----HHHHTTT---T-SEEEEES---SCGGH-HHHHTTS-HHH
T ss_pred HHH---HHHHHHhcCCccChhheEEEEeccchHHHHH----HHHhccc---ceeeEeeeCchHhhhhccHHHHhcCCHHH
Confidence 333 5566665443 3457999999999999999 8878877 89999999987543211000 0000000
Q ss_pred hhhhcCCccccCCCCCCCCCCCCHHHHHHHhcC-CCCccCCcchhHHHHHHHHHHHHHhhc--cCCCccEEEEeeCCCCc
Q 016589 253 FSLVVPKYQFKGANKRGVPVSRDPAALLAKYSD-PLVYTGPIRVRTGHEILRLSSYLKRNF--KSVSVPFFVLHGTGDKV 329 (386)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~lii~G~~D~~ 329 (386)
...+... .+.. ..+.+.+...... .+. ....+ .+.++|+|.++|++|.+
T Consensus 314 ~d~LA~r--------lG~~-~~~~~~l~~el~~~SLk-------------------~qGlL~~rr~~~plL~i~~~~D~v 365 (411)
T PF06500_consen 314 LDVLASR--------LGMA-AVSDESLRGELNKFSLK-------------------TQGLLSGRRCPTPLLAINGEDDPV 365 (411)
T ss_dssp HHHHHHH--------CT-S-CE-HHHHHHHGGGGSTT-------------------TTTTTTSS-BSS-EEEEEETT-SS
T ss_pred HHHHHHH--------hCCc-cCCHHHHHHHHHhcCcc-------------------hhccccCCCCCcceEEeecCCCCC
Confidence 0000000 0000 0011111111100 000 02233 56788999999999999
Q ss_pred cChHHHHHHHHHhhcCCCcEEEcCCCC-CcccCCccHHHHHHHHHHHHhhhh
Q 016589 330 TDPLASQDLYNEAASRFKDIKLYEGLL-HDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 330 v~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
+|.+..+-+...-. +.+...++... |. .-+.....+.+||++.+
T Consensus 366 ~P~eD~~lia~~s~--~gk~~~~~~~~~~~-----gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 366 SPIEDSRLIAESST--DGKALRIPSKPLHM-----GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp S-HHHHHHHHHTBT--T-EEEEE-SSSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCC--CCceeecCCCcccc-----chHHHHHHHHHHHHHhc
Confidence 99998876665443 36677776543 42 34567899999998764
No 89
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=3.8e-15 Score=120.15 Aligned_cols=221 Identities=16% Similarity=0.146 Sum_probs=136.6
Q ss_pred CCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEE
Q 016589 121 ELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLF 200 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lv 200 (386)
..++.++++|-.|+++..|+.+...|.. .+.+++++|||+|..-..+.. .+++.+++.+...+.. ...+.++.++
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~---~~~d~P~alf 79 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPLL-TDIESLADELANELLP---PLLDAPFALF 79 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCccc-ccHHHHHHHHHHHhcc---ccCCCCeeec
Confidence 4467899999999999999999998865 499999999999976443322 3666666666665553 2234579999
Q ss_pred EechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHH
Q 016589 201 GHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALL 280 (386)
Q Consensus 201 GhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (386)
||||||++|.+ +|.+.......+.++.+++.......... .....+.....
T Consensus 80 GHSmGa~lAfE----vArrl~~~g~~p~~lfisg~~aP~~~~~~-------------------------~i~~~~D~~~l 130 (244)
T COG3208 80 GHSMGAMLAFE----VARRLERAGLPPRALFISGCRAPHYDRGK-------------------------QIHHLDDADFL 130 (244)
T ss_pred ccchhHHHHHH----HHHHHHHcCCCcceEEEecCCCCCCcccC-------------------------CccCCCHHHHH
Confidence 99999999999 66655443334555555432211110000 00001111111
Q ss_pred HHhcCCCCcc-----CCcchhHHHHHHHH----HHHH-HhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEE
Q 016589 281 AKYSDPLVYT-----GPIRVRTGHEILRL----SSYL-KRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIK 350 (386)
Q Consensus 281 ~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~-~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~ 350 (386)
+...+..... ...-.....-+++. .+.+ ...-..++||+.++.|++|..+..+....+.+...+ ..+++
T Consensus 131 ~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~-~f~l~ 209 (244)
T COG3208 131 ADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG-DFTLR 209 (244)
T ss_pred HHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC-CceEE
Confidence 1111100000 00000001111111 0101 111246799999999999999999999988887763 47899
Q ss_pred EcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 351 LYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 351 ~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
+++| ||+++.+ +.+++...|.+.+..
T Consensus 210 ~fdG-gHFfl~~-~~~~v~~~i~~~l~~ 235 (244)
T COG3208 210 VFDG-GHFFLNQ-QREEVLARLEQHLAH 235 (244)
T ss_pred EecC-cceehhh-hHHHHHHHHHHHhhh
Confidence 9997 8988877 888888888887764
No 90
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.68 E-value=2.6e-16 Score=107.04 Aligned_cols=79 Identities=41% Similarity=0.758 Sum_probs=73.4
Q ss_pred CceEEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016589 107 RNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLE 186 (386)
Q Consensus 107 g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~ 186 (386)
|.+|+++.|.|+++ ++.+|+++||++.++..|..+++.|+++||.|+++|+||||.|++...+..+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 67899999999875 78999999999999999999999999999999999999999999888888899999999998874
No 91
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.67 E-value=4.5e-15 Score=135.51 Aligned_cols=238 Identities=12% Similarity=0.063 Sum_probs=146.6
Q ss_pred EEEecCCCC-CCceEEEEECCCCCChhhH-----HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 016589 112 CRSWIPVSG-ELKGILIIIHGLNEHSGRY-----AQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFL 185 (386)
Q Consensus 112 ~~~~~p~~~-~~~p~vv~lHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l 185 (386)
...|.|... ..+.+||+++.+-.....+ +.+++.|.++||.|+++|+++-+.... ..+++++++.+.+++
T Consensus 203 LiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r----~~~ldDYv~~i~~Al 278 (560)
T TIGR01839 203 LIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR----EWGLSTYVDALKEAV 278 (560)
T ss_pred EEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc----CCCHHHHHHHHHHHH
Confidence 344556443 4467899999988555555 689999999999999999998665532 248899999999999
Q ss_pred HHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhH----------------
Q 016589 186 EKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAV---------------- 249 (386)
Q Consensus 186 ~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~---------------- 249 (386)
+.+....+..++.++|||+||.++..++..+++++++ .+|++++++....++..........
T Consensus 279 d~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~--~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G 356 (560)
T TIGR01839 279 DAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQL--RKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAG 356 (560)
T ss_pred HHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCC--CceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcC
Confidence 9999888888999999999999988644446777774 1699999988887765422111110
Q ss_pred -------hhhhhhhcCCccccCCCCCCC--CCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHH----------Hh
Q 016589 250 -------APLFSLVVPKYQFKGANKRGV--PVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYL----------KR 310 (386)
Q Consensus 250 -------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 310 (386)
...+..+.+.-.......... ........+.....|.....+..... ..+++....-. .-
T Consensus 357 ~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e-~l~ly~~N~L~~pG~l~v~G~~i 435 (560)
T TIGR01839 357 VLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGD-LLDMFKSNPLTRPDALEVCGTPI 435 (560)
T ss_pred CcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHH-HHHHHhcCCCCCCCCEEECCEEe
Confidence 000111111100000000000 00001111222222222222211111 11111111100 11
Q ss_pred hccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCc
Q 016589 311 NFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHD 358 (386)
Q Consensus 311 ~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 358 (386)
++++|++|++++.|++|.++|++.+....+.+.+ +++++..+ +||.
T Consensus 436 dL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHI 481 (560)
T TIGR01839 436 DLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHI 481 (560)
T ss_pred chhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCcc
Confidence 3578999999999999999999999999998876 46666665 4786
No 92
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.65 E-value=8.4e-15 Score=130.07 Aligned_cols=247 Identities=14% Similarity=0.196 Sum_probs=149.4
Q ss_pred ceEEEEECCCCCChhh-HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEE
Q 016589 123 KGILIIIHGLNEHSGR-YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFG 201 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvG 201 (386)
.|+||++..+.+.... -+.+++.|.. |+.|+..||.--+..+...+. .+++++++-+.+++++++. +++++|
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~-f~ldDYi~~l~~~i~~~G~-----~v~l~G 174 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK-FDLEDYIDYLIEFIRFLGP-----DIHVIA 174 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-CCHHHHHHHHHHHHHHhCC-----CCcEEE
Confidence 3789999988865554 4678899988 999999999876644322233 4889999888888877732 389999
Q ss_pred echhhHHHHhhhhhHhhc-CCccccceeEEEEcCcccccCCCCchhhhHhh------hhhhhcCCcccc--CCCCCCCC-
Q 016589 202 HSTGGAVVLKRTFVQAAS-YPHIEAMLEGIVLSAPALRVEPAHPIVGAVAP------LFSLVVPKYQFK--GANKRGVP- 271 (386)
Q Consensus 202 hS~Gg~~a~~~~~~~a~~-~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~- 271 (386)
+|+||.+++.++.++++. +|. +++++++++++++..........+.. +........... .......+
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~---~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG 251 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPA---QPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPG 251 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCC---CcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCH
Confidence 999999988722222222 255 69999999999888754333332221 111110000000 00000000
Q ss_pred -----------------------------CCCCHHH---HHHHhcCCCCccCCcchhHHHHHHHHHHHH---------Hh
Q 016589 272 -----------------------------VSRDPAA---LLAKYSDPLVYTGPIRVRTGHEILRLSSYL---------KR 310 (386)
Q Consensus 272 -----------------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 310 (386)
.....+. ..+++.+....++.....+....++...-. .-
T Consensus 252 ~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~V 331 (406)
T TIGR01849 252 FLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRV 331 (406)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEe
Confidence 0000000 111112222222222222222222211100 01
Q ss_pred hccCCC-ccEEEEeeCCCCccChHHHHHHHHHh---hcCCCcEEEcCCCCCcccCC--ccHHHHHHHHHHHHhhh
Q 016589 311 NFKSVS-VPFFVLHGTGDKVTDPLASQDLYNEA---ASRFKDIKLYEGLLHDLLFE--LERDEVAQDIIVWLEKK 379 (386)
Q Consensus 311 ~~~~i~-~P~lii~G~~D~~v~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~i~~fl~~~ 379 (386)
++++|+ +|+|.+.|++|.++|+..++.+.+.+ ++.+++.+..+++||...+. ..+++++..|.+||.++
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 246788 99999999999999999999988875 55556677888999988765 23688999999999863
No 93
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.65 E-value=4.2e-15 Score=131.65 Aligned_cols=280 Identities=15% Similarity=0.112 Sum_probs=175.3
Q ss_pred cccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhH------HHHHHHHHhCCCeEEEeCCCCCCCCCCC--
Q 016589 96 RWSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRY------AQFARQLTSCNFGVYAMDWIGHGGSDGL-- 167 (386)
Q Consensus 96 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~------~~~~~~L~~~G~~vi~~D~~G~G~S~~~-- 167 (386)
..++..+.+.||..+..... |..++++|+|++.||+-.++..| ..++-.|+++||+|+.-+.||.-.|...
T Consensus 47 ~~E~h~V~T~DgYiL~lhRI-p~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~ 125 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRI-PRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKK 125 (403)
T ss_pred ceEEEEEEccCCeEEEEeee-cCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcc
Confidence 46778899999986655554 43337799999999999999888 4567788899999999999997666421
Q ss_pred -------CCCCCChHHH-HHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 168 -------HGYVPSLDHV-VADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 168 -------~~~~~~~~~~-~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
.-+..++.++ ..|+.+.|+++....+..+++.+|||+|+...+. .++..|+..++|+..++++|....
T Consensus 126 l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv----~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 126 LSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFV----MLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred cCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhhee----hhcccchhhhhhheeeeecchhhh
Confidence 1223466664 6799999999988887789999999999999999 888998888889999999999865
Q ss_pred CCCCchhhhHhhh-------hhhhcCCccccCCCC----CCCCCCCCHHHHH-------HHhc-----------CCC---
Q 016589 240 EPAHPIVGAVAPL-------FSLVVPKYQFKGANK----RGVPVSRDPAALL-------AKYS-----------DPL--- 287 (386)
Q Consensus 240 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~-----------~~~--- 287 (386)
............. +..+.....+..... .....+....... .... -+.
T Consensus 202 k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~ 281 (403)
T KOG2624|consen 202 KHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLA 281 (403)
T ss_pred cccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhc
Confidence 5222221111111 111111100000000 0000000000000 0000 000
Q ss_pred CccCCcchhHHHHHHHH----------------------HHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcC
Q 016589 288 VYTGPIRVRTGHEILRL----------------------SSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASR 345 (386)
Q Consensus 288 ~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~ 345 (386)
......+.+...-..+. .....-.+.++++|+.+.+|+.|.++.++.+..+....++.
T Consensus 282 h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~ 361 (403)
T KOG2624|consen 282 HLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNS 361 (403)
T ss_pred cCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccc
Confidence 00001111111111110 00012245677999999999999999999999888888764
Q ss_pred CCcEE-EcCCCCCcccCC--ccHHHHHHHHHHHHhhhh
Q 016589 346 FKDIK-LYEGLLHDLLFE--LERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 346 ~~~~~-~~~~~gH~~~~~--~~~~~~~~~i~~fl~~~~ 380 (386)
..... .+++-.|.-+.- +.++++.+.|++.++...
T Consensus 362 ~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 362 VIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 33222 278899975542 358999999999887654
No 94
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.65 E-value=1.3e-14 Score=114.50 Aligned_cols=180 Identities=18% Similarity=0.230 Sum_probs=134.4
Q ss_pred eEEEEECC-CCCChhhHHHHHHHHHhCCCeEEEeCCC-CCCCCCC-CCC------CCCChHHHHHHHHHHHHHHHHhCCC
Q 016589 124 GILIIIHG-LNEHSGRYAQFARQLTSCNFGVYAMDWI-GHGGSDG-LHG------YVPSLDHVVADTGAFLEKIKLENPT 194 (386)
Q Consensus 124 p~vv~lHG-~~~~~~~~~~~~~~L~~~G~~vi~~D~~-G~G~S~~-~~~------~~~~~~~~~~d~~~~l~~l~~~~~~ 194 (386)
..||.+-- ||.....-+..+..++..||.|+++|+. |-..+.. ... ...+.+..-.++..++++++.+.+.
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 45555555 4444445788999999999999999985 3111211 100 0014445567999999999987777
Q ss_pred CCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCC
Q 016589 195 VPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSR 274 (386)
Q Consensus 195 ~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (386)
.+|.++|.+|||-++.. +.+..|+ +.+.+..-|....
T Consensus 120 kkIGv~GfCwGak~vv~----~~~~~~~----f~a~v~~hps~~d----------------------------------- 156 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVT----LSAKDPE----FDAGVSFHPSFVD----------------------------------- 156 (242)
T ss_pred ceeeEEEEeecceEEEE----eeccchh----heeeeEecCCcCC-----------------------------------
Confidence 89999999999999998 7888885 7777777664321
Q ss_pred CHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCC---cEEE
Q 016589 275 DPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFK---DIKL 351 (386)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~---~~~~ 351 (386)
...+..+++|++++.|+.|.++|+.....+-+.+..... ++++
T Consensus 157 ----------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~ 202 (242)
T KOG3043|consen 157 ----------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKT 202 (242)
T ss_pred ----------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEE
Confidence 344567889999999999999999999888888865433 6899
Q ss_pred cCCCCCcccCC----------ccHHHHHHHHHHHHhhhh
Q 016589 352 YEGLLHDLLFE----------LERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 352 ~~~~gH~~~~~----------~~~~~~~~~i~~fl~~~~ 380 (386)
++|.+|.++.. ...++..+.+++|+++++
T Consensus 203 f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 203 FSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 99999998741 125788899999999876
No 95
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.65 E-value=1.9e-14 Score=120.13 Aligned_cols=256 Identities=16% Similarity=0.205 Sum_probs=146.2
Q ss_pred EeccCCceEEEEEecCCCCCCceEEEEECCCCCChhh-HHHHH-----HHHHhCCCeEEEeCCCCCCCCCC--CCCC-CC
Q 016589 102 FFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGR-YAQFA-----RQLTSCNFGVYAMDWIGHGGSDG--LHGY-VP 172 (386)
Q Consensus 102 ~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~-~~~~~-----~~L~~~G~~vi~~D~~G~G~S~~--~~~~-~~ 172 (386)
+.+.-| .+++.+++..++ .+|+||-.|..|-+... |..+. +.+.+ .|.++-+|.||+..... +.++ .+
T Consensus 4 v~t~~G-~v~V~v~G~~~~-~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 4 VETPYG-SVHVTVQGDPKG-NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEETTE-EEEEEEESS--T-TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----TT----
T ss_pred eccCce-EEEEEEEecCCC-CCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCccccccccccc
Confidence 334444 788888876553 68999999999988776 65543 44544 59999999999976432 3332 35
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhh-
Q 016589 173 SLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAP- 251 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~- 251 (386)
++++.++++.+++++++.+. ++.+|--.|+++..+ +|..+|+ +|.|+|+++|........ .++..
T Consensus 81 smd~LAe~l~~Vl~~f~lk~----vIg~GvGAGAnIL~r----fAl~~p~---~V~GLiLvn~~~~~~gw~---Ew~~~K 146 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKS----VIGFGVGAGANILAR----FALKHPE---RVLGLILVNPTCTAAGWM---EWFYQK 146 (283)
T ss_dssp -HHHHHCTHHHHHHHHT-------EEEEEETHHHHHHHH----HHHHSGG---GEEEEEEES---S---HH---HHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccE----EEEEeeccchhhhhh----ccccCcc---ceeEEEEEecCCCCccHH---HHHHHH
Confidence 89999999999999999987 999999999999999 9999999 999999999976553221 11111
Q ss_pred hhhhhcCCccccCCCCC-------CCC-CCCCHHHHHHHhcCCC-CccCCcchhHHHHHHHHHHHHHhhccCCCccEEEE
Q 016589 252 LFSLVVPKYQFKGANKR-------GVP-VSRDPAALLAKYSDPL-VYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVL 322 (386)
Q Consensus 252 ~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 322 (386)
+..+......+...... +.. ...+.+ +.+.+.... ....+.......+.+..+.++....+...||+|++
T Consensus 147 ~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~D-lv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlv 225 (283)
T PF03096_consen 147 LSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSD-LVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLV 225 (283)
T ss_dssp HH-------CTTS-HHHHHHHHHS-HHHHHCT-H-HHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEE
T ss_pred HhcccccccccccchHHhhhhcccccccccccHH-HHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEE
Confidence 11111111100000000 000 001111 111111111 11222334444455555566777777889999999
Q ss_pred eeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 323 HGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 323 ~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
.|+..+. .+.+.++..++.....++..++++|=....| +|..+.+.+.=|++.
T Consensus 226 vG~~Sp~--~~~vv~~ns~Ldp~~ttllkv~dcGglV~eE-qP~klaea~~lFlQG 278 (283)
T PF03096_consen 226 VGDNSPH--VDDVVEMNSKLDPTKTTLLKVADCGGLVLEE-QPGKLAEAFKLFLQG 278 (283)
T ss_dssp EETTSTT--HHHHHHHHHHS-CCCEEEEEETT-TT-HHHH--HHHHHHHHHHHHHH
T ss_pred EecCCcc--hhhHHHHHhhcCcccceEEEecccCCccccc-CcHHHHHHHHHHHcc
Confidence 9999886 4666788888876667888889998876666 999999999999874
No 96
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.64 E-value=3.4e-14 Score=113.54 Aligned_cols=227 Identities=13% Similarity=0.099 Sum_probs=124.7
Q ss_pred eeEeccCCceEEEEEecCCCC--CCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCC-CCCCCCCCCCCChHH
Q 016589 100 SLFFGVKRNALFCRSWIPVSG--ELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGH-GGSDGLHGYVPSLDH 176 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~~~--~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~~~~~~~~ 176 (386)
+.+...+|.+|+.+.-.|... ..+++||+.+|++.....|..++.+|+..||+|+.+|.-.| |.|++.... +++..
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftms~ 83 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTMSI 83 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhh-cchHH
Confidence 455667888999888888664 45689999999999999999999999999999999998876 888876544 48889
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhh
Q 016589 177 VVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLV 256 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 256 (386)
..+|+..+++++. ..+..++.++.-|+.|-+|+. .|+ .++ +.-+|..-+...... .+...+..-
T Consensus 84 g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~----Va~-~i~----lsfLitaVGVVnlr~------TLe~al~~D 147 (294)
T PF02273_consen 84 GKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYE----VAA-DIN----LSFLITAVGVVNLRD------TLEKALGYD 147 (294)
T ss_dssp HHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHH----HTT-TS------SEEEEES--S-HHH------HHHHHHSS-
T ss_pred hHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHH----Hhh-ccC----cceEEEEeeeeeHHH------HHHHHhccc
Confidence 9999999999999 555668999999999999999 665 444 566777666654321 111110000
Q ss_pred cCCccccCCCCC--CCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHH----HHHHHHhhccCCCccEEEEeeCCCCcc
Q 016589 257 VPKYQFKGANKR--GVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILR----LSSYLKRNFKSVSVPFFVLHGTGDKVT 330 (386)
Q Consensus 257 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~lii~G~~D~~v 330 (386)
.-.......... .....-+.+. +..++.. ....-...++.+.+|++.+++++|.+|
T Consensus 148 yl~~~i~~lp~dldfeGh~l~~~v------------------Fv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV 209 (294)
T PF02273_consen 148 YLQLPIEQLPEDLDFEGHNLGAEV------------------FVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWV 209 (294)
T ss_dssp GGGS-GGG--SEEEETTEEEEHHH------------------HHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS
T ss_pred hhhcchhhCCCcccccccccchHH------------------HHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccc
Confidence 000000000000 0000000000 1111111 112235567888999999999999999
Q ss_pred ChHHHHHHHHHhhcCCCcEEEcCCCCCcccC
Q 016589 331 DPLASQDLYNEAASRFKDIKLYEGLLHDLLF 361 (386)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 361 (386)
......++...+.+...+++.++|++|.+..
T Consensus 210 ~q~eV~~~~~~~~s~~~klysl~Gs~HdL~e 240 (294)
T PF02273_consen 210 KQSEVEELLDNINSNKCKLYSLPGSSHDLGE 240 (294)
T ss_dssp -HHHHHHHHTT-TT--EEEEEETT-SS-TTS
T ss_pred cHHHHHHHHHhcCCCceeEEEecCccchhhh
Confidence 9999999999888777889999999997653
No 97
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.63 E-value=2.4e-14 Score=120.76 Aligned_cols=238 Identities=21% Similarity=0.277 Sum_probs=94.5
Q ss_pred CceEEEEECCCCCChh---hHHHHHHHHHhCCCeEEEeCCC----CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhC--
Q 016589 122 LKGILIIIHGLNEHSG---RYAQFARQLTSCNFGVYAMDWI----GHGGSDGLHGYVPSLDHVVADTGAFLEKIKLEN-- 192 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~-- 192 (386)
....||||.|++.... ....+++.|...||.|+-+-++ |+|.+ +++..++|+.+++++++...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHHHHHHHHHHHhhcc
Confidence 4568999999987544 3677889997779999998865 55533 88999999999999999884
Q ss_pred --CCCCEEEEEechhhHHHHhhhhhHhhcCCc--cccceeEEEEcCcccccCCCCchhhh---Hhhhhh---hhcCCccc
Q 016589 193 --PTVPCFLFGHSTGGAVVLKRTFVQAASYPH--IEAMLEGIVLSAPALRVEPAHPIVGA---VAPLFS---LVVPKYQF 262 (386)
Q Consensus 193 --~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~--~~~~v~~lvl~~p~~~~~~~~~~~~~---~~~~~~---~~~~~~~~ 262 (386)
+..+|+|+|||.|+.-++. |+..... ....|+++|+-+|..+.......... +..... .+...-.-
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~----Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~ 179 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLH----YLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKG 179 (303)
T ss_dssp ----S-EEEEEECCHHHHHHH----HHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-T
T ss_pred ccCCccEEEEecCCCcHHHHH----HHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCC
Confidence 3468999999999999999 5554321 12379999999998876654433221 222211 11100000
Q ss_pred cCCCCCCC-CCCC-CHHHHHHHhcCCCCccCCcchhHHHHHHHH---HHHHHhhccCCCccEEEEeeCCCCccChHHH-H
Q 016589 263 KGANKRGV-PVSR-DPAALLAKYSDPLVYTGPIRVRTGHEILRL---SSYLKRNFKSVSVPFFVLHGTGDKVTDPLAS-Q 336 (386)
Q Consensus 263 ~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~-~ 336 (386)
........ .... +.......+..-.. . ....+++.. .+.+.+.+..++.|+|++.+++|..+|+..- +
T Consensus 180 ~~~lp~~~~~~~~~~~PiTA~Rf~SL~s-~-----~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~ 253 (303)
T PF08538_consen 180 DEILPREFTPLVFYDTPITAYRFLSLAS-P-----GGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKE 253 (303)
T ss_dssp T-GG----GGTTT-SS---HHHHHT-S--S-----SHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------
T ss_pred CceeeccccccccCCCcccHHHHHhccC-C-----CCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccc
Confidence 00000000 0000 00101111110000 0 011111111 1345677888999999999999999986542 3
Q ss_pred HHHHHhhcC------CCcEEEcCCCCCcccCCcc---HHHHHHHHHHHHh
Q 016589 337 DLYNEAASR------FKDIKLYEGLLHDLLFELE---RDEVAQDIIVWLE 377 (386)
Q Consensus 337 ~~~~~~~~~------~~~~~~~~~~gH~~~~~~~---~~~~~~~i~~fl~ 377 (386)
++.+++... ...-.++||++|..-.+.+ .+.+.+.+..||+
T Consensus 254 ~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 254 ALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 333333321 1224578999998765422 2356777777764
No 98
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.61 E-value=4.1e-15 Score=128.76 Aligned_cols=127 Identities=19% Similarity=0.155 Sum_probs=95.1
Q ss_pred CCceEEEEEecC--CCCCCceEEEEECCCCCChhh-HHH---------HHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 016589 106 KRNALFCRSWIP--VSGELKGILIIIHGLNEHSGR-YAQ---------FARQLTSCNFGVYAMDWIGHGGSDGLHGYVPS 173 (386)
Q Consensus 106 ~g~~l~~~~~~p--~~~~~~p~vv~lHG~~~~~~~-~~~---------~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~ 173 (386)
||.+|.+.+|.| ...++.|+||..|+++.+... ... ....++++||.|+..|.||.|.|.+.... .
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~--~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP--M 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T--T
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc--C
Confidence 789999999999 666889999999999965311 111 11238899999999999999999876543 2
Q ss_pred hHHHHHHHHHHHHHHHHhC-CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC
Q 016589 174 LDHVVADTGAFLEKIKLEN-PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP 241 (386)
Q Consensus 174 ~~~~~~d~~~~l~~l~~~~-~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~ 241 (386)
.....+|..++|+++..+. .+.+|.++|.|++|..++. +|+..|. .+++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~----~A~~~~p---~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWA----AAARRPP---HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHH----HHTTT-T---TEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHH----HHhcCCC---CceEEEecccCCcccc
Confidence 5667899999999998764 3448999999999999999 8886776 7999999887776654
No 99
>COG0400 Predicted esterase [General function prediction only]
Probab=99.60 E-value=5.5e-14 Score=113.86 Aligned_cols=179 Identities=20% Similarity=0.251 Sum_probs=120.5
Q ss_pred CCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCC--CCCCC---CCCCCCCChHH---HHHHHHHHHHHHHHhC
Q 016589 121 ELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIG--HGGSD---GLHGYVPSLDH---VVADTGAFLEKIKLEN 192 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G--~G~S~---~~~~~~~~~~~---~~~d~~~~l~~l~~~~ 192 (386)
...|+||++||+|++...+-++...+..+ +.++.+.=+= .|.-. ......++.++ ..+.+.++++.+..++
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~ 94 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEY 94 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHh
Confidence 45689999999999988888866665443 6666553210 01000 00111123333 3444555555555555
Q ss_pred C--CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCC
Q 016589 193 P--TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGV 270 (386)
Q Consensus 193 ~--~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (386)
+ .++++++|+|.||++++. +..++|+ .++++++.+|........
T Consensus 95 gi~~~~ii~~GfSqGA~ial~----~~l~~~~---~~~~ail~~g~~~~~~~~--------------------------- 140 (207)
T COG0400 95 GIDSSRIILIGFSQGANIALS----LGLTLPG---LFAGAILFSGMLPLEPEL--------------------------- 140 (207)
T ss_pred CCChhheEEEecChHHHHHHH----HHHhCch---hhccchhcCCcCCCCCcc---------------------------
Confidence 3 468999999999999999 9999998 899999999876543210
Q ss_pred CCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCC--Cc
Q 016589 271 PVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRF--KD 348 (386)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~--~~ 348 (386)
.-..-..|+++++|++|++||...+.++.+.+.+.+ ++
T Consensus 141 ----------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~ 180 (207)
T COG0400 141 ----------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVE 180 (207)
T ss_pred ----------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEE
Confidence 001225799999999999999999998888876544 45
Q ss_pred EEEcCCCCCcccCCccHHHHHHHHHHHHhhhh
Q 016589 349 IKLYEGLLHDLLFELERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 349 ~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 380 (386)
.+.++ .||.... +..+.+.+|+.+..
T Consensus 181 ~~~~~-~GH~i~~-----e~~~~~~~wl~~~~ 206 (207)
T COG0400 181 VRWHE-GGHEIPP-----EELEAARSWLANTL 206 (207)
T ss_pred EEEec-CCCcCCH-----HHHHHHHHHHHhcc
Confidence 56677 7996543 35677778887653
No 100
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.59 E-value=8.6e-14 Score=119.06 Aligned_cols=232 Identities=17% Similarity=0.263 Sum_probs=143.0
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHh---CCCeEEEeCCCCCCCCCCC-----CCCCCChHHHHHHHHHHHHHHHHhC--
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTS---CNFGVYAMDWIGHGGSDGL-----HGYVPSLDHVVADTGAFLEKIKLEN-- 192 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~---~G~~vi~~D~~G~G~S~~~-----~~~~~~~~~~~~d~~~~l~~l~~~~-- 192 (386)
++.+++++|.+|-.+.|..+++.|.+ ..|.|+++.+.||-.++.. ....++++++++-..++++.+....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 57899999999999999999998884 4799999999999777654 3455799999999999999988765
Q ss_pred CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhh----------------hhh
Q 016589 193 PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLF----------------SLV 256 (386)
Q Consensus 193 ~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~----------------~~~ 256 (386)
+..+++++|||.|++++++ .+.+.++...+|.+++++-|....-...+....+.+++ ...
T Consensus 82 ~~~~liLiGHSIGayi~le----vl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~~~~~~~l~~~ 157 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALE----VLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWLASFLSFLLSL 157 (266)
T ss_pred CCCcEEEEeCcHHHHHHHH----HHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 5678999999999999999 88888833338999999999876544443332222211 111
Q ss_pred cCCccccCCCCCCCCCC-CCHHHHHHHhcCCCCccCCcchhHHHHHHHHH----HHHHhhccCCCccEEEEeeCCCCccC
Q 016589 257 VPKYQFKGANKRGVPVS-RDPAALLAKYSDPLVYTGPIRVRTGHEILRLS----SYLKRNFKSVSVPFFVLHGTGDKVTD 331 (386)
Q Consensus 257 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~P~lii~G~~D~~v~ 331 (386)
.|............... ...........++...... -.....++.... .++.....+-..++.+.+|.+|.++|
T Consensus 158 lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qa-L~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~fg~~D~Wvp 236 (266)
T PF10230_consen 158 LPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQA-LYMARDEMREIREDDNDELIKHHNENGDKLWFYFGQNDHWVP 236 (266)
T ss_pred CCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHH-HHHHHHHHHHccCcchHHHHHHhccCCCEEEEEEeCCCCCCC
Confidence 12111111110000000 0011111111111100000 000111111111 11112222225689999999999999
Q ss_pred hHHHHHHHHHhhcCCCcEEE-cCCCCCcc
Q 016589 332 PLASQDLYNEAASRFKDIKL-YEGLLHDL 359 (386)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~-~~~~gH~~ 359 (386)
.+..+++.+..++.+.++.+ .+|..|.+
T Consensus 237 ~~~~~~l~~~~~~~~~~~~v~~~~i~HaF 265 (266)
T PF10230_consen 237 NETRDELIERYPGHEPDVVVDEEGIPHAF 265 (266)
T ss_pred HHHHHHHHHHcCCCCCeEEEecCCCCCCC
Confidence 99999999999853333333 26777754
No 101
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.58 E-value=2.3e-13 Score=112.76 Aligned_cols=116 Identities=21% Similarity=0.286 Sum_probs=85.2
Q ss_pred EEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 016589 112 CRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLE 191 (386)
Q Consensus 112 ~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~ 191 (386)
..++.|...+..|++||+||+......|..+.+++++.||.|+++|+...+.. .....++++.++++|+...
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~~ 77 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAKG 77 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHhc
Confidence 34555777778999999999998888899999999999999999997654321 2223355555666665432
Q ss_pred C----------CCCCEEEEEechhhHHHHhhhhhHhhcCC--ccccceeEEEEcCccccc
Q 016589 192 N----------PTVPCFLFGHSTGGAVVLKRTFVQAASYP--HIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 192 ~----------~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p--~~~~~v~~lvl~~p~~~~ 239 (386)
. +-.++.+.|||-||-++.. ++..+- ....+++++++++|.-..
T Consensus 78 L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~----~al~~~~~~~~~~~~ali~lDPVdG~ 133 (259)
T PF12740_consen 78 LESKLPLGVKPDFSKLALAGHSRGGKVAFA----MALGNASSSLDLRFSALILLDPVDGM 133 (259)
T ss_pred chhhccccccccccceEEeeeCCCCHHHHH----HHhhhcccccccceeEEEEecccccc
Confidence 1 2347999999999999998 666651 111279999999998643
No 102
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.55 E-value=5e-13 Score=109.91 Aligned_cols=262 Identities=15% Similarity=0.148 Sum_probs=167.1
Q ss_pred ccceeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhh-HHHH-----HHHHHhCCCeEEEeCCCCCCCCC--CCC
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGR-YAQF-----ARQLTSCNFGVYAMDWIGHGGSD--GLH 168 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~-~~~~-----~~~L~~~G~~vi~~D~~G~G~S~--~~~ 168 (386)
.++..+.+..| .++..+++..++ ++|+||-.|..+-+... |..+ +..+.++ |.|+-+|-||+-... -+.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~-~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~ 98 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKG-NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPE 98 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCC-CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCC
Confidence 44555656554 688888887664 68899999999988776 5543 3455566 999999999985543 233
Q ss_pred CC-CCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhh
Q 016589 169 GY-VPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVG 247 (386)
Q Consensus 169 ~~-~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~ 247 (386)
++ .+++++.++++..+++++..+. ++-+|.-.|+++..+ +|..||+ +|.|+|++++........ .
T Consensus 99 ~y~yPsmd~LAd~l~~VL~~f~lk~----vIg~GvGAGAyIL~r----FAl~hp~---rV~GLvLIn~~~~a~gwi---e 164 (326)
T KOG2931|consen 99 GYPYPSMDDLADMLPEVLDHFGLKS----VIGMGVGAGAYILAR----FALNHPE---RVLGLVLINCDPCAKGWI---E 164 (326)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCcce----EEEecccccHHHHHH----HHhcChh---heeEEEEEecCCCCchHH---H
Confidence 32 3589999999999999999887 999999999999999 9999999 999999999876543221 1
Q ss_pred hHhh-hhhhhcCCccccCC-------CCCCCCCCCCHHHHHHHhcCCC-CccCCcchhHHHHHHHHHHHHHhhcc----C
Q 016589 248 AVAP-LFSLVVPKYQFKGA-------NKRGVPVSRDPAALLAKYSDPL-VYTGPIRVRTGHEILRLSSYLKRNFK----S 314 (386)
Q Consensus 248 ~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 314 (386)
+... +...+......... ...+........++.+.+...+ ....+.+.....+.+..+.++..... .
T Consensus 165 w~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~t 244 (326)
T KOG2931|consen 165 WAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTT 244 (326)
T ss_pred HHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCcc
Confidence 1111 11111100000000 0000001111122222222111 11122333333444444444433333 3
Q ss_pred CCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 315 VSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 315 i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
++||+|++.|+..+.+ +.+.+...++......+..+.++|-....+ +|..+.+.+.=|++.
T Consensus 245 lkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~-qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 245 LKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEE-QPGKLAEAFKYFLQG 305 (326)
T ss_pred ccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCccccc-CchHHHHHHHHHHcc
Confidence 4699999999998764 455666667766667788888998866555 899999999999874
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.54 E-value=8e-13 Score=105.82 Aligned_cols=181 Identities=21% Similarity=0.270 Sum_probs=107.1
Q ss_pred EEEECCCCCChhhHH--HHHHHHHhCC--CeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEE
Q 016589 126 LIIIHGLNEHSGRYA--QFARQLTSCN--FGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFG 201 (386)
Q Consensus 126 vv~lHG~~~~~~~~~--~~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvG 201 (386)
|+++||+.++..+.. .+.+.+.+.+ ..+..+|++ .......+.+.++++....+ .+.++|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~----~~~liG 65 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE----NVVLIG 65 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC----CeEEEE
Confidence 799999999887754 4566676654 456666665 14455556666666554433 399999
Q ss_pred echhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHH
Q 016589 202 HSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLA 281 (386)
Q Consensus 202 hS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (386)
.|+||..|.. +|.+++ +++ |+++|++.+.. .+...+.. ...... .. ...........
T Consensus 66 SSlGG~~A~~----La~~~~-----~~a-vLiNPav~p~~------~l~~~iG~---~~~~~~-~e---~~~~~~~~~~~ 122 (187)
T PF05728_consen 66 SSLGGFYATY----LAERYG-----LPA-VLINPAVRPYE------LLQDYIGE---QTNPYT-GE---SYELTEEHIEE 122 (187)
T ss_pred EChHHHHHHH----HHHHhC-----CCE-EEEcCCCCHHH------HHHHhhCc---cccCCC-Cc---cceechHhhhh
Confidence 9999999999 888886 333 88899876531 11111111 000000 00 00000000000
Q ss_pred HhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccC
Q 016589 282 KYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLF 361 (386)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 361 (386)
. ..+......-..+++++.++.|.+++...+...+ .+ ....+.+|++|.+.
T Consensus 123 -l----------------------~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~~---~~--~~~~i~~ggdH~f~- 173 (187)
T PF05728_consen 123 -L----------------------KALEVPYPTNPERYLVLLQTGDEVLDYREAVAKY---RG--CAQIIEEGGDHSFQ- 173 (187)
T ss_pred -c----------------------ceEeccccCCCccEEEEEecCCcccCHHHHHHHh---cC--ceEEEEeCCCCCCc-
Confidence 0 0000011223569999999999999996655444 33 45556688899543
Q ss_pred CccHHHHHHHHHHHH
Q 016589 362 ELERDEVAQDIIVWL 376 (386)
Q Consensus 362 ~~~~~~~~~~i~~fl 376 (386)
+-++..+.|.+|+
T Consensus 174 --~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 174 --DFEEYLPQIIAFL 186 (187)
T ss_pred --cHHHHHHHHHHhh
Confidence 5778888898886
No 104
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.53 E-value=9.4e-14 Score=115.94 Aligned_cols=102 Identities=22% Similarity=0.223 Sum_probs=74.0
Q ss_pred EEEECCCCC---ChhhHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh-----CCCCC
Q 016589 126 LIIIHGLNE---HSGRYAQFARQLTS-CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLE-----NPTVP 196 (386)
Q Consensus 126 vv~lHG~~~---~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-----~~~~~ 196 (386)
||++||.+. +......++..+++ .|+.|+.+|||-..+ ..+.+..+|+.++++++..+ .+.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~--------~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE--------APFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT--------SSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc--------ccccccccccccceeeeccccccccccccc
Confidence 799999774 44445667777774 899999999995422 26778899999999999877 45568
Q ss_pred EEEEEechhhHHHHhhhhhHhhcCCcc-ccceeEEEEcCccccc
Q 016589 197 CFLFGHSTGGAVVLKRTFVQAASYPHI-EAMLEGIVLSAPALRV 239 (386)
Q Consensus 197 i~lvGhS~Gg~~a~~~~~~~a~~~p~~-~~~v~~lvl~~p~~~~ 239 (386)
|+++|+|.||.+++. ++....+. ...++++++++|..+.
T Consensus 73 i~l~G~SAGg~la~~----~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALS----LALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHH----HHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhh----hhhhhhhhcccchhhhhcccccccc
Confidence 999999999999999 55433221 1258999999998766
No 105
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.53 E-value=1.5e-13 Score=108.89 Aligned_cols=151 Identities=23% Similarity=0.307 Sum_probs=96.0
Q ss_pred EEEECCCCCChhh-HH-HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEec
Q 016589 126 LIIIHGLNEHSGR-YA-QFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHS 203 (386)
Q Consensus 126 vv~lHG~~~~~~~-~~-~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS 203 (386)
|+++||++++... |. .+.+.|.+. ++|-.+|+ + .++.+++...+.+.+..+ .+++++||||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~-----~P~~~~W~~~l~~~i~~~-----~~~~ilVaHS 63 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D-----NPDLDEWVQALDQAIDAI-----DEPTILVAHS 63 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T-----S--HHHHHHHHHHCCHC------TTTEEEEEET
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C-----CCCHHHHHHHHHHHHhhc-----CCCeEEEEeC
Confidence 6899999987654 54 456667555 78887776 1 125666666666665543 2259999999
Q ss_pred hhhHHHHhhhhhHh-hcCCccccceeEEEEcCcccccC--CCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHH
Q 016589 204 TGGAVVLKRTFVQA-ASYPHIEAMLEGIVLSAPALRVE--PAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALL 280 (386)
Q Consensus 204 ~Gg~~a~~~~~~~a-~~~p~~~~~v~~lvl~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (386)
+|+..+++ ++ ..... +|.++++++|+.... ...+... ...
T Consensus 64 LGc~~~l~----~l~~~~~~---~v~g~lLVAp~~~~~~~~~~~~~~----------------~f~-------------- 106 (171)
T PF06821_consen 64 LGCLTALR----WLAEQSQK---KVAGALLVAPFDPDDPEPFPPELD----------------GFT-------------- 106 (171)
T ss_dssp HHHHHHHH----HHHHTCCS---SEEEEEEES--SCGCHHCCTCGGC----------------CCT--------------
T ss_pred HHHHHHHH----HHhhcccc---cccEEEEEcCCCcccccchhhhcc----------------ccc--------------
Confidence 99999999 77 45555 899999999985420 0000000 000
Q ss_pred HHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCccc
Q 016589 281 AKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLL 360 (386)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 360 (386)
......+.+|.+++.+++|+++|.+.++++.+.+. ++++.++++||+.-
T Consensus 107 ----------------------------~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~---a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 107 ----------------------------PLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG---AELIILGGGGHFNA 155 (171)
T ss_dssp ----------------------------TSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT----EEEEETS-TTSSG
T ss_pred ----------------------------cCcccccCCCeEEEEcCCCCccCHHHHHHHHHHcC---CCeEECCCCCCccc
Confidence 00112235677999999999999999999999986 68999999999654
Q ss_pred C
Q 016589 361 F 361 (386)
Q Consensus 361 ~ 361 (386)
.
T Consensus 156 ~ 156 (171)
T PF06821_consen 156 A 156 (171)
T ss_dssp G
T ss_pred c
Confidence 3
No 106
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.52 E-value=5.5e-12 Score=111.71 Aligned_cols=232 Identities=15% Similarity=0.171 Sum_probs=134.1
Q ss_pred eccCCceEEEEEecC--CCCCCceEEEEECCCCC---ChhhHHHHH-HHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHH
Q 016589 103 FGVKRNALFCRSWIP--VSGELKGILIIIHGLNE---HSGRYAQFA-RQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDH 176 (386)
Q Consensus 103 ~~~~g~~l~~~~~~p--~~~~~~p~vv~lHG~~~---~~~~~~~~~-~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~ 176 (386)
...++..+.++.|.| ....+.|+||++||.+. +......++ ..+...|+.|+++|||-..+. .+..
T Consensus 57 ~~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~--------~~p~ 128 (312)
T COG0657 57 AGPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH--------PFPA 128 (312)
T ss_pred cCCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC--------CCCc
Confidence 344555577888888 33346899999999774 444453444 445578999999999955433 4555
Q ss_pred HHHHHHHHHHHHHHhC-----CCCCEEEEEechhhHHHHhhhhhHhhcCCcc-ccceeEEEEcCcccccCCCCchhhhHh
Q 016589 177 VVADTGAFLEKIKLEN-----PTVPCFLFGHSTGGAVVLKRTFVQAASYPHI-EAMLEGIVLSAPALRVEPAHPIVGAVA 250 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~-----~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~-~~~v~~lvl~~p~~~~~~~~~~~~~~~ 250 (386)
.++|+.+.++++..+. +.++|+++|+|.||++++. ++..-.+. .....+.++++|..+............
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~----~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~ 204 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALA----LALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYG 204 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHH----HHHHHHhcCCCCceEEEEEecccCCcccccchhhcC
Confidence 6788888888887553 3568999999999999998 44432221 114678999999987764111000000
Q ss_pred hhhhhhcCCccccCCCCCCCCCCCCHHHHH----HHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCC
Q 016589 251 PLFSLVVPKYQFKGANKRGVPVSRDPAALL----AKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTG 326 (386)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 326 (386)
........... ..+............. ....+.+.. -.|+++++|+.
T Consensus 205 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~s---------pl~~~~~~~-lPP~~i~~a~~ 255 (312)
T COG0657 205 -------------------EADLLDAAAILAWFADLYLGAAPDREDPEAS---------PLASDDLSG-LPPTLIQTAEF 255 (312)
T ss_pred -------------------CccccCHHHHHHHHHHHhCcCccccCCCccC---------ccccccccC-CCCEEEEecCC
Confidence 00000000000 0000000000000000 000111333 35899999999
Q ss_pred CCccChHHHHHHHHHhhcC--CCcEEEcCCCCCcccCC--ccHHHHHHHHHHHHh
Q 016589 327 DKVTDPLASQDLYNEAASR--FKDIKLYEGLLHDLLFE--LERDEVAQDIIVWLE 377 (386)
Q Consensus 327 D~~v~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~--~~~~~~~~~i~~fl~ 377 (386)
|.+.+ ....+.+++... ..+++.+++..|.+... +...+....+.+|+.
T Consensus 256 D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 256 DPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred Ccchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHH
Confidence 99987 455555555443 35778899999976433 234444566777776
No 107
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.51 E-value=2.3e-13 Score=122.35 Aligned_cols=108 Identities=20% Similarity=0.216 Sum_probs=83.6
Q ss_pred CceEEEEECCCCCCh--hhHHH-HHHHHHh--CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhC--CC
Q 016589 122 LKGILIIIHGLNEHS--GRYAQ-FARQLTS--CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLEN--PT 194 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~--~~~~~-~~~~L~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~--~~ 194 (386)
.+|++|++||++++. ..|.. +.+.|.. ..|+|+++|++|+|.+..+... .......+++.++++++.... +.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 468999999998754 34664 5666542 3599999999999987654332 244667788999999886432 34
Q ss_pred CCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 195 VPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 195 ~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
++++++||||||++|.. ++...|+ +|.++++++|+.
T Consensus 119 ~~VhLIGHSLGAhIAg~----ag~~~p~---rV~rItgLDPAg 154 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGI----AGSLTKH---KVNRITGLDPAG 154 (442)
T ss_pred CcEEEEEECHHHHHHHH----HHHhCCc---ceeEEEEEcCCC
Confidence 57999999999999999 8888888 899999999874
No 108
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.51 E-value=1.8e-11 Score=106.52 Aligned_cols=241 Identities=17% Similarity=0.169 Sum_probs=143.2
Q ss_pred eeEeccCCceEEEEEecCCCC---CCceEEEEECCCCC-----ChhhHHHHHHHHH-hCCCeEEEeCCCCCCCCCCCCCC
Q 016589 100 SLFFGVKRNALFCRSWIPVSG---ELKGILIIIHGLNE-----HSGRYAQFARQLT-SCNFGVYAMDWIGHGGSDGLHGY 170 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~~~---~~~p~vv~lHG~~~-----~~~~~~~~~~~L~-~~G~~vi~~D~~G~G~S~~~~~~ 170 (386)
..++......+..++|.|... ...|+|||+||+|. +...|+.+...++ +.+..|+++|||-..+..-|.
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa-- 141 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA-- 141 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc--
Confidence 445556667788999988654 45799999999874 3455888888886 568999999999666554433
Q ss_pred CCChHHHHHHHHHHHH--HHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhh
Q 016589 171 VPSLDHVVADTGAFLE--KIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGA 248 (386)
Q Consensus 171 ~~~~~~~~~d~~~~l~--~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~ 248 (386)
.+++..+.+..+.+ ++....+..+++|+|.|.||.+|..++-+++... ....++++.|++.|.+...........
T Consensus 142 --~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~-~~~~ki~g~ili~P~~~~~~~~~~e~~ 218 (336)
T KOG1515|consen 142 --AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEK-LSKPKIKGQILIYPFFQGTDRTESEKQ 218 (336)
T ss_pred --cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhcc-CCCcceEEEEEEecccCCCCCCCHHHH
Confidence 33443444444444 2333345668999999999999998333333222 111279999999999876543322110
Q ss_pred -------------HhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCC
Q 016589 249 -------------VAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSV 315 (386)
Q Consensus 249 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 315 (386)
....+....+.... ...+|....... .........
T Consensus 219 ~~~~~~~~~~~~~~~~~w~~~lP~~~~-------------------~~~~p~~np~~~-------------~~~~d~~~~ 266 (336)
T KOG1515|consen 219 QNLNGSPELARPKIDKWWRLLLPNGKT-------------------DLDHPFINPVGN-------------SLAKDLSGL 266 (336)
T ss_pred HhhcCCcchhHHHHHHHHHHhCCCCCC-------------------CcCCcccccccc-------------ccccCcccc
Confidence 00000001111000 000011000000 001122223
Q ss_pred Cc-cEEEEeeCCCCccChHHHHHHHHHhhcCCCc--EEEcCCCCCcccCC----ccHHHHHHHHHHHHhhh
Q 016589 316 SV-PFFVLHGTGDKVTDPLASQDLYNEAASRFKD--IKLYEGLLHDLLFE----LERDEVAQDIIVWLEKK 379 (386)
Q Consensus 316 ~~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~--~~~~~~~gH~~~~~----~~~~~~~~~i~~fl~~~ 379 (386)
.+ |++++.++.|.+. +....+.+++.+.+.+ +..++++.|.++.- +...++.+.+.+|+++.
T Consensus 267 ~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 267 GLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCCceEEEEeCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 33 5999999999886 4555666666655554 44679999987653 24567888888998764
No 109
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.49 E-value=2.1e-12 Score=125.58 Aligned_cols=223 Identities=16% Similarity=0.108 Sum_probs=131.7
Q ss_pred HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhC----------------CCCCEEEEEech
Q 016589 141 QFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLEN----------------PTVPCFLFGHST 204 (386)
Q Consensus 141 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~----------------~~~~i~lvGhS~ 204 (386)
.+.+.|+++||.|+..|.||.|.|++.... ...+..+|..++|+++..+. .+.+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 356788899999999999999999885322 22556889999999998431 245899999999
Q ss_pred hhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCC---chh----hh----HhhhhhhhcCCccccCCCCCCCCCC
Q 016589 205 GGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAH---PIV----GA----VAPLFSLVVPKYQFKGANKRGVPVS 273 (386)
Q Consensus 205 Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~---~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (386)
||.+++. +|+..|. .++++|..++..+..... ... .. ...+......... ... ...
T Consensus 348 ~G~~~~~----aAa~~pp---~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~-----~~~-~~~ 414 (767)
T PRK05371 348 LGTLPNA----VATTGVE---GLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNL-----LAG-DYL 414 (767)
T ss_pred HHHHHHH----HHhhCCC---cceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhccc-----Ccc-hhh
Confidence 9999998 7887777 799999887765432100 000 00 0000000000000 000 000
Q ss_pred CCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhc--CCCcEEE
Q 016589 274 RDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAAS--RFKDIKL 351 (386)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~ 351 (386)
...+............. ........+++.. .++...+.++++|+|+++|..|..+++..+.++++.+.. ...++.+
T Consensus 415 ~~~~~~~~~~~~~~~~~-~~~~~~y~~fW~~-rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l 492 (767)
T PRK05371 415 RHNEACEKLLAELTAAQ-DRKTGDYNDFWDD-RNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFL 492 (767)
T ss_pred cchHHHHHHHhhhhhhh-hhcCCCccHHHHh-CCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEE
Confidence 00111110000000000 0000000111111 123456688999999999999999999998888888864 2355655
Q ss_pred cCCCCCcccCCccHHHHHHHHHHHHhhhhc
Q 016589 352 YEGLLHDLLFELERDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 352 ~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 381 (386)
.+ .+|.........++.+.+.+|+..++.
T Consensus 493 ~~-g~H~~~~~~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 493 HQ-GGHVYPNNWQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred eC-CCccCCCchhHHHHHHHHHHHHHhccc
Confidence 45 478654433466788889999988864
No 110
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.47 E-value=1.8e-13 Score=117.84 Aligned_cols=110 Identities=20% Similarity=0.215 Sum_probs=81.7
Q ss_pred CceEEEEECCCCCCh-hhHHH-HHHHHH-hCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhC--CCCC
Q 016589 122 LKGILIIIHGLNEHS-GRYAQ-FARQLT-SCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLEN--PTVP 196 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~-~~~~~-~~~~L~-~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~ 196 (386)
.+|++|++||++++. ..|.. +...+. ..+|+|+++|+++++.+..+ ....+.....+++..+++.+.... +.++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 368999999999887 55654 455454 45799999999987432211 111245556778888898886652 3457
Q ss_pred EEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 197 CFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 197 i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
++++|||+||+++.. ++..+|+ ++.++++++|+...
T Consensus 114 i~lIGhSlGa~vAg~----~a~~~~~---~v~~iv~LDPa~p~ 149 (275)
T cd00707 114 VHLIGHSLGAHVAGF----AGKRLNG---KLGRITGLDPAGPL 149 (275)
T ss_pred EEEEEecHHHHHHHH----HHHHhcC---ccceeEEecCCccc
Confidence 999999999999999 8888888 89999999887543
No 111
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.47 E-value=5.4e-13 Score=127.32 Aligned_cols=117 Identities=18% Similarity=0.122 Sum_probs=90.3
Q ss_pred ceeEeccCCceEEEEEecCC------CCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCC-----
Q 016589 99 TSLFFGVKRNALFCRSWIPV------SGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGL----- 167 (386)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~p~------~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~----- 167 (386)
...+..+++.++.|...+.. ...++|+||++||++++...|..+++.|+++||+|+++|+||||.|...
T Consensus 419 p~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 419 PVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred ceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 34666777777766653221 1134689999999999999999999999989999999999999999432
Q ss_pred -----CC---C---------CCChHHHHHHHHHHHHHHH------Hh------CCCCCEEEEEechhhHHHHhhhhhHhh
Q 016589 168 -----HG---Y---------VPSLDHVVADTGAFLEKIK------LE------NPTVPCFLFGHSTGGAVVLKRTFVQAA 218 (386)
Q Consensus 168 -----~~---~---------~~~~~~~~~d~~~~l~~l~------~~------~~~~~i~lvGhS~Gg~~a~~~~~~~a~ 218 (386)
.. + ..++++.+.|+..+...+. .. .+..+++++||||||.++.. ++.
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~----~~~ 574 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTS----FIA 574 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHH----HHH
Confidence 11 1 1267889999999999887 22 34568999999999999999 665
Q ss_pred c
Q 016589 219 S 219 (386)
Q Consensus 219 ~ 219 (386)
.
T Consensus 575 ~ 575 (792)
T TIGR03502 575 Y 575 (792)
T ss_pred h
Confidence 4
No 112
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.47 E-value=1.9e-13 Score=118.10 Aligned_cols=134 Identities=16% Similarity=0.120 Sum_probs=85.7
Q ss_pred ccccceeEeccCCceEEEEEecCCC-CCCceEEEEECCCCCChhh--------------H----HHHHHHHHhCCCeEEE
Q 016589 95 CRWSTSLFFGVKRNALFCRSWIPVS-GELKGILIIIHGLNEHSGR--------------Y----AQFARQLTSCNFGVYA 155 (386)
Q Consensus 95 ~~~~~~~~~~~~g~~l~~~~~~p~~-~~~~p~vv~lHG~~~~~~~--------------~----~~~~~~L~~~G~~vi~ 155 (386)
...+...|...++.++..++..|.+ .++.|.||++||-++..+. + ..++..|+++||.|++
T Consensus 86 Y~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla 165 (390)
T PF12715_consen 86 YTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLA 165 (390)
T ss_dssp EEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEE
T ss_pred eEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEE
Confidence 4677788888999999999999987 4778999999997764422 1 2368899999999999
Q ss_pred eCCCCCCCCCCCCCCC----CChHH---------------HHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhh
Q 016589 156 MDWIGHGGSDGLHGYV----PSLDH---------------VVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTF 214 (386)
Q Consensus 156 ~D~~G~G~S~~~~~~~----~~~~~---------------~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~ 214 (386)
+|.+|+|+........ ++.+. .+.|...+++++.... +.++|.++|+||||..++.
T Consensus 166 ~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~--- 242 (390)
T PF12715_consen 166 PDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW--- 242 (390)
T ss_dssp E--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH---
T ss_pred EccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH---
Confidence 9999999876543211 11111 2235556777776543 3457999999999999999
Q ss_pred hHhhcCCccccceeEEEEcCcc
Q 016589 215 VQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 215 ~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
+++..+ +|++.|..+-.
T Consensus 243 -LaALDd----RIka~v~~~~l 259 (390)
T PF12715_consen 243 -LAALDD----RIKATVANGYL 259 (390)
T ss_dssp -HHHH-T----T--EEEEES-B
T ss_pred -HHHcch----hhHhHhhhhhh
Confidence 899888 58877765543
No 113
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.47 E-value=2.5e-12 Score=108.81 Aligned_cols=104 Identities=18% Similarity=0.290 Sum_probs=78.1
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEec
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHS 203 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS 203 (386)
++|+|+|+.+++...|..+++.|...++.|+.++++|.+....+ ..++++++++..+.|..... ..++.++|||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~---~~si~~la~~y~~~I~~~~~---~gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPP---PDSIEELASRYAEAIRARQP---EGPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHE---ESSHHHHHHHHHHHHHHHTS---SSSEEEEEET
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCC---CCCHHHHHHHHHHHhhhhCC---CCCeeehccC
Confidence 37999999999999999999999654599999999999832221 23788887776666655443 3489999999
Q ss_pred hhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 204 TGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 204 ~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
+||.+|+. +|.+-.+.+..+..++++++..
T Consensus 75 ~Gg~lA~E----~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 75 FGGILAFE----MARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHH----HHHHHHHTT-SESEEEEESCSS
T ss_pred ccHHHHHH----HHHHHHHhhhccCceEEecCCC
Confidence 99999999 5554333233688999988543
No 114
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=4.6e-12 Score=122.91 Aligned_cols=229 Identities=18% Similarity=0.204 Sum_probs=149.1
Q ss_pred CCceEEEEEecCCC---CCCceEEEEECCCCCChhhH----HHHHH-HHHhCCCeEEEeCCCCCCCCCCCC-----CCCC
Q 016589 106 KRNALFCRSWIPVS---GELKGILIIIHGLNEHSGRY----AQFAR-QLTSCNFGVYAMDWIGHGGSDGLH-----GYVP 172 (386)
Q Consensus 106 ~g~~l~~~~~~p~~---~~~~p~vv~lHG~~~~~~~~----~~~~~-~L~~~G~~vi~~D~~G~G~S~~~~-----~~~~ 172 (386)
+|...++....|++ .++.|.++.+||.+++.... ..+.. .....|+.|+.+|.||-|.....- ...
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~l- 584 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNL- 584 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhc-
Confidence 88899999988854 35679999999999733221 11222 455789999999999988664321 110
Q ss_pred ChHHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHh
Q 016589 173 SLDHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVA 250 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~ 250 (386)
. ...++|...+++.+.... +..++.++|+|+||.+++. .+..+|+. -+++.+.++|..+..-.....
T Consensus 585 G-~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~----~l~~~~~~--~fkcgvavaPVtd~~~yds~~---- 653 (755)
T KOG2100|consen 585 G-DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLK----LLESDPGD--VFKCGVAVAPVTDWLYYDSTY---- 653 (755)
T ss_pred C-CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHH----HhhhCcCc--eEEEEEEecceeeeeeecccc----
Confidence 1 112456666666654443 4457999999999999999 88888741 455569999987764110000
Q ss_pred hhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccE-EEEeeCCCCc
Q 016589 251 PLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPF-FVLHGTGDKV 329 (386)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-lii~G~~D~~ 329 (386)
..++ .+.+..... . +.+ ......+..++.|. |++||+.|..
T Consensus 654 ------tery-------mg~p~~~~~-~----y~e--------------------~~~~~~~~~~~~~~~LliHGt~Ddn 695 (755)
T KOG2100|consen 654 ------TERY-------MGLPSENDK-G----YEE--------------------SSVSSPANNIKTPKLLLIHGTEDDN 695 (755)
T ss_pred ------cHhh-------cCCCccccc-h----hhh--------------------ccccchhhhhccCCEEEEEcCCcCC
Confidence 0000 000000000 0 000 01233445565565 9999999999
Q ss_pred cChHHHHHHHHHhhcCC--CcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhcCCc
Q 016589 330 TDPLASQDLYNEAASRF--KDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLGCSI 384 (386)
Q Consensus 330 v~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~~ 384 (386)
|+.+++..+.+++...+ .++.++|+.+|.+.....-..+...+..|+...+....
T Consensus 696 Vh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~~ 752 (755)
T KOG2100|consen 696 VHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSPV 752 (755)
T ss_pred cCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCccc
Confidence 99999999999887654 46778999999877653457888999999997766544
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.44 E-value=1.1e-11 Score=92.35 Aligned_cols=181 Identities=15% Similarity=0.165 Sum_probs=116.7
Q ss_pred ceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCC-----CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 016589 123 KGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGH-----GGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTV 195 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~-----G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 195 (386)
.-+||+-||.+.+.++ ....+..|+.+|+.|..++++-. |...+++....-.+.+...+ ..+.......
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~----aql~~~l~~g 89 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAI----AQLRAGLAEG 89 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHH----HHHHhcccCC
Confidence 4588999999987765 78889999999999999998743 22212222211222233333 3333333344
Q ss_pred CEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCC
Q 016589 196 PCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRD 275 (386)
Q Consensus 196 ~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (386)
+.++-|+||||-++.. .+..-.. .|+++++++=++........
T Consensus 90 pLi~GGkSmGGR~aSm----vade~~A---~i~~L~clgYPfhppGKPe~------------------------------ 132 (213)
T COG3571 90 PLIIGGKSMGGRVASM----VADELQA---PIDGLVCLGYPFHPPGKPEQ------------------------------ 132 (213)
T ss_pred ceeeccccccchHHHH----HHHhhcC---CcceEEEecCccCCCCCccc------------------------------
Confidence 7999999999999988 6655443 58888887633322111000
Q ss_pred HHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCC
Q 016589 276 PAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGL 355 (386)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (386)
--.+++..+++|++|.+|+.|.+-..+.+.. ..-+...++++++++
T Consensus 133 -------------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~---y~ls~~iev~wl~~a 178 (213)
T COG3571 133 -------------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAG---YALSDPIEVVWLEDA 178 (213)
T ss_pred -------------------------------chhhhccCCCCCeEEeecccccccCHHHHHh---hhcCCceEEEEeccC
Confidence 0156788899999999999999877666532 222344899999999
Q ss_pred CCcccCC---------ccHHHHHHHHHHHHhh
Q 016589 356 LHDLLFE---------LERDEVAQDIIVWLEK 378 (386)
Q Consensus 356 gH~~~~~---------~~~~~~~~~i~~fl~~ 378 (386)
.|.+--. .+-....+.|..|...
T Consensus 179 dHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 179 DHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred ccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 9975322 1223445566666654
No 116
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.41 E-value=4.3e-11 Score=102.72 Aligned_cols=247 Identities=13% Similarity=0.085 Sum_probs=137.9
Q ss_pred EEEEecCCCC--CCceEEEEECCCCCChhhHH-H-HHHHHHhCCCeEEEeCCCCCCCCCCCCCC---CCCh-------HH
Q 016589 111 FCRSWIPVSG--ELKGILIIIHGLNEHSGRYA-Q-FARQLTSCNFGVYAMDWIGHGGSDGLHGY---VPSL-------DH 176 (386)
Q Consensus 111 ~~~~~~p~~~--~~~p~vv~lHG~~~~~~~~~-~-~~~~L~~~G~~vi~~D~~G~G~S~~~~~~---~~~~-------~~ 176 (386)
++....|... +.+|++|.++|.|......+ . ++..|.++|+..+.+..|-||...+.... ..+. ..
T Consensus 78 ~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~ 157 (348)
T PF09752_consen 78 RFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRA 157 (348)
T ss_pred EEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhH
Confidence 3444445542 56899999999998554332 3 47888888999999999999865433111 1111 23
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCC-chhhh---Hhhh
Q 016589 177 VVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAH-PIVGA---VAPL 252 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~-~~~~~---~~~~ 252 (386)
.+.+...+++++..+ +..++.+.|.||||.+|.. .|+.+|. .+..+-.+++........ ..... ...+
T Consensus 158 ~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~l----aa~~~p~---pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L 229 (348)
T PF09752_consen 158 TILESRALLHWLERE-GYGPLGLTGISMGGHMAAL----AASNWPR---PVALVPCLSWSSASVVFTEGVLSNSINWDAL 229 (348)
T ss_pred HHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHh----hhhcCCC---ceeEEEeecccCCCcchhhhhhhcCCCHHHH
Confidence 456777888898887 6779999999999999999 8889997 555454444433211100 00000 0000
Q ss_pred hhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCc-----cEEEEeeCCC
Q 016589 253 FSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSV-----PFFVLHGTGD 327 (386)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----P~lii~G~~D 327 (386)
...+. ...+.... .............. .................. +-..++.+..+ .+.++.+++|
T Consensus 230 ~~q~~-~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~Ea~~~m~~~m-d~~T~l~nf~~P~dp~~ii~V~A~~D 300 (348)
T PF09752_consen 230 EKQFE-DTVYEEEI-SDIPAQNKSLPLDS------MEERRRDREALRFMRGVM-DSFTHLTNFPVPVDPSAIIFVAAKND 300 (348)
T ss_pred HHHhc-ccchhhhh-cccccCcccccchh------hccccchHHHHHHHHHHH-HhhccccccCCCCCCCcEEEEEecCc
Confidence 00000 00000000 00000000000000 000000000111111111 11233333333 4789999999
Q ss_pred CccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 328 KVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 328 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
.+||......+.+.+++ +++.+++| ||...+-.+.+.+-+.|.+=++
T Consensus 301 aYVPr~~v~~Lq~~WPG--sEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 301 AYVPRHGVLSLQEIWPG--SEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred eEechhhcchHHHhCCC--CeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 99999999988888877 89999988 9976544366777777776554
No 117
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.40 E-value=8e-12 Score=97.84 Aligned_cols=187 Identities=16% Similarity=0.170 Sum_probs=127.0
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEec
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHS 203 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS 203 (386)
..+||+.|=++-...=..+++.|+++|+.|+.+|-+-|=.+.+ +.++.+.|+..++++...+.+..+++|+|+|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER------TPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC------CHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 3688888888777666789999999999999999876655543 7788899999999999998888899999999
Q ss_pred hhhHHHHhhhhhHhhcCCc-cccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHH
Q 016589 204 TGGAVVLKRTFVQAASYPH-IEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAK 282 (386)
Q Consensus 204 ~Gg~~a~~~~~~~a~~~p~-~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (386)
+|+-+.-. ...+-|. ...+|..+++++|.....-......++ . ...... .
T Consensus 77 FGADvlP~----~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wl----g-------~~~~~~------~-------- 127 (192)
T PF06057_consen 77 FGADVLPF----IYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWL----G-------MGGDDA------A-------- 127 (192)
T ss_pred CCchhHHH----HHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhc----C-------CCCCcc------c--------
Confidence 99987766 4555543 344899999999875432111100000 0 000000 0
Q ss_pred hcCCCCccCCcchhHHHHHHHHHHHHHhhccCC-CccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccC
Q 016589 283 YSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSV-SVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLF 361 (386)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 361 (386)
. .....+.++ ..|+++|+|++|.-.. +..+..++.+.+.+||..| +
T Consensus 128 ------------~-----------~~~pei~~l~~~~v~CiyG~~E~d~~-------cp~l~~~~~~~i~lpGgHH---f 174 (192)
T PF06057_consen 128 ------------Y-----------PVIPEIAKLPPAPVQCIYGEDEDDSL-------CPSLRQPGVEVIALPGGHH---F 174 (192)
T ss_pred ------------C-----------CchHHHHhCCCCeEEEEEcCCCCCCc-------CccccCCCcEEEEcCCCcC---C
Confidence 0 012334444 3599999998876422 2233445688999998544 2
Q ss_pred CccHHHHHHHHHHHHhh
Q 016589 362 ELERDEVAQDIIVWLEK 378 (386)
Q Consensus 362 ~~~~~~~~~~i~~fl~~ 378 (386)
+.+.+.+.+.|++-+++
T Consensus 175 d~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 175 DGDYDALAKRILDALKA 191 (192)
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 33788888888877654
No 118
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.39 E-value=1.2e-11 Score=100.39 Aligned_cols=118 Identities=16% Similarity=0.162 Sum_probs=89.8
Q ss_pred EEEEEecCCCCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 016589 110 LFCRSWIPVSGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIK 189 (386)
Q Consensus 110 l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~ 189 (386)
....++.|...+..|+|+|+||+.-....|..+...++++||.|+++++-.. .. + +-.+.+++..++++|+.
T Consensus 33 kpLlI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~~-p-----~~~~Ei~~aa~V~~WL~ 104 (307)
T PF07224_consen 33 KPLLIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL--FP-P-----DGQDEIKSAASVINWLP 104 (307)
T ss_pred CCeEEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc--cC-C-----CchHHHHHHHHHHHHHH
Confidence 3455666777778999999999999999999999999999999999998642 11 1 33344677777777775
Q ss_pred HhC----------CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccC
Q 016589 190 LEN----------PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 190 ~~~----------~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~ 240 (386)
... +-.++.++|||.||-.|.. +|..+. ..-.+.++|.++|.....
T Consensus 105 ~gL~~~Lp~~V~~nl~klal~GHSrGGktAFA----lALg~a-~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 105 EGLQHVLPENVEANLSKLALSGHSRGGKTAFA----LALGYA-TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred hhhhhhCCCCcccccceEEEeecCCccHHHHH----HHhccc-ccCchhheecccccCCCC
Confidence 431 2347999999999999999 777664 223688899999986553
No 119
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.39 E-value=1.8e-11 Score=100.35 Aligned_cols=121 Identities=17% Similarity=0.228 Sum_probs=83.1
Q ss_pred EEEEEecCCCC--CCceEEEEECCCCCChhhHHHH--HHHHH-hCCCeEEEeCCCCCCCCCCC----CCCCCChHHHHHH
Q 016589 110 LFCRSWIPVSG--ELKGILIIIHGLNEHSGRYAQF--ARQLT-SCNFGVYAMDWIGHGGSDGL----HGYVPSLDHVVAD 180 (386)
Q Consensus 110 l~~~~~~p~~~--~~~p~vv~lHG~~~~~~~~~~~--~~~L~-~~G~~vi~~D~~G~G~S~~~----~~~~~~~~~~~~d 180 (386)
|.|++|.|+.. .+.|+||++||.+++...+... ...|+ ++||.|+.++.........- ......-......
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 46889988753 3579999999999998876542 23455 56899999986422111100 0000011123456
Q ss_pred HHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 181 TGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 181 ~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
+.++++++..++ +..+|++.|+|.||+++.. ++..+|+ .+.++...++..
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~----la~~~pd---~faa~a~~sG~~ 132 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANV----LACAYPD---LFAAVAVVSGVP 132 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHH----HHHhCCc---cceEEEeecccc
Confidence 777788777666 4558999999999999999 9999999 788877766553
No 120
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.36 E-value=2.8e-11 Score=105.23 Aligned_cols=235 Identities=14% Similarity=0.103 Sum_probs=140.6
Q ss_pred ecCCCCC-CceEEEEECCCCCChhhH-----HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHH-HHHHHHHHH
Q 016589 115 WIPVSGE-LKGILIIIHGLNEHSGRY-----AQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVV-ADTGAFLEK 187 (386)
Q Consensus 115 ~~p~~~~-~~p~vv~lHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~d~~~~l~~ 187 (386)
|.|...+ .+++++++|.+-.....+ +.++..|.++|+.|+.+++++-..+.. ..++++++ +.+...++.
T Consensus 98 y~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~ 173 (445)
T COG3243 98 YKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDT 173 (445)
T ss_pred cCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHH
Confidence 3354332 467899999987655544 568899999999999999987665544 23778887 899999999
Q ss_pred HHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhh-------------------
Q 016589 188 IKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGA------------------- 248 (386)
Q Consensus 188 l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~------------------- 248 (386)
+....+.++|.++|||.||.++.. +++.++.. +|+.+++.....++.......-.
T Consensus 174 v~~itg~~~InliGyCvGGtl~~~----ala~~~~k--~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~l 247 (445)
T COG3243 174 VKDITGQKDINLIGYCVGGTLLAA----ALALMAAK--RIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGIL 247 (445)
T ss_pred HHHHhCccccceeeEecchHHHHH----HHHhhhhc--ccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCC
Confidence 988877778999999999999998 77888772 48888887766665432221100
Q ss_pred ----HhhhhhhhcCCccccCCCCCCCC--CCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHH---------Hhhcc
Q 016589 249 ----VAPLFSLVVPKYQFKGANKRGVP--VSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYL---------KRNFK 313 (386)
Q Consensus 249 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 313 (386)
+...+..+.+........-.... ....+-++.....+.-...+........+++....-. .-.+.
T Consensus 248 pg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~ 327 (445)
T COG3243 248 PGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLG 327 (445)
T ss_pred ChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechh
Confidence 00111111111110000000000 0111112222222221111111111222222211111 12357
Q ss_pred CCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccC
Q 016589 314 SVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLF 361 (386)
Q Consensus 314 ~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 361 (386)
+|+||++++.|++|.++|+..+....+.+++ ++++ +.-++||....
T Consensus 328 ~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f-~l~~sGHIa~v 373 (445)
T COG3243 328 DITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTF-VLSRSGHIAGV 373 (445)
T ss_pred hcccceEEEeecccccCCHHHHHHHHHhcCC-ceEE-EEecCceEEEE
Confidence 8999999999999999999999988888876 3444 44567997543
No 121
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.35 E-value=1.9e-11 Score=109.55 Aligned_cols=186 Identities=17% Similarity=0.189 Sum_probs=99.7
Q ss_pred CCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCC------CCC----C--------------CCCCC---
Q 016589 121 ELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGS------DGL----H--------------GYVPS--- 173 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S------~~~----~--------------~~~~~--- 173 (386)
++.|+|||-||++++...|..++..||++||.|+++|+|..-.. +.. . .....
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 55899999999999999999999999999999999999943110 000 0 00000
Q ss_pred -------hHHHHHHHHHHHHHHHHh---C-------------------CCCCEEEEEechhhHHHHhhhhhHhhcCCccc
Q 016589 174 -------LDHVVADTGAFLEKIKLE---N-------------------PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIE 224 (386)
Q Consensus 174 -------~~~~~~d~~~~l~~l~~~---~-------------------~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~ 224 (386)
++.-+.++..+++.+..- . +-.+++++|||+||..++. .+... .
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~----~l~~d-~-- 250 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQ----ALRQD-T-- 250 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHH----HHHH--T--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHH----HHhhc-c--
Confidence 111244566666665421 0 0125999999999999999 55555 4
Q ss_pred cceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHH
Q 016589 225 AMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRL 304 (386)
Q Consensus 225 ~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (386)
++++.|+++|+..+-.
T Consensus 251 -r~~~~I~LD~W~~Pl~--------------------------------------------------------------- 266 (379)
T PF03403_consen 251 -RFKAGILLDPWMFPLG--------------------------------------------------------------- 266 (379)
T ss_dssp -T--EEEEES---TTS----------------------------------------------------------------
T ss_pred -CcceEEEeCCcccCCC---------------------------------------------------------------
Confidence 6999999998753210
Q ss_pred HHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhh-cCCCcEEEcCCCCCcccCC-----c-------------cH
Q 016589 305 SSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAA-SRFKDIKLYEGLLHDLLFE-----L-------------ER 365 (386)
Q Consensus 305 ~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~-----~-------------~~ 365 (386)
.+....++.|+|+|+.+. +........+.+... ..+..+..+.|+.|.-+.+ + ++
T Consensus 267 ----~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp 340 (379)
T PF03403_consen 267 ----DEIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDP 340 (379)
T ss_dssp ----GGGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-H
T ss_pred ----cccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCH
Confidence 112245678999998875 223333333333222 2345678889999985433 1 22
Q ss_pred ----HHHHHHHHHHHhhhhcCC
Q 016589 366 ----DEVAQDIIVWLEKKLGCS 383 (386)
Q Consensus 366 ----~~~~~~i~~fl~~~~~~~ 383 (386)
+...+.+.+||++++..+
T Consensus 341 ~~a~~i~~~~~l~FL~~~L~~~ 362 (379)
T PF03403_consen 341 ERALRINNRASLAFLRRHLGLH 362 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHHHHhcCCc
Confidence 345567888999987643
No 122
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=1.1e-10 Score=105.77 Aligned_cols=234 Identities=14% Similarity=0.058 Sum_probs=147.1
Q ss_pred ccceeEeccCCceEEEEEecCCC---CCCceEEEEECCCCCChhh-----HHH--HHHHHHhCCCeEEEeCCCCCCCCCC
Q 016589 97 WSTSLFFGVKRNALFCRSWIPVS---GELKGILIIIHGLNEHSGR-----YAQ--FARQLTSCNFGVYAMDWIGHGGSDG 166 (386)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~p~~---~~~~p~vv~lHG~~~~~~~-----~~~--~~~~L~~~G~~vi~~D~~G~G~S~~ 166 (386)
.+...|.+..|..++.-+|.|.+ +++.|+++++-|.++-... +.. -...|++.||.|+.+|-||.-....
T Consensus 613 ~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 613 PEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccch
Confidence 35677888889999999999864 3668999999998863222 211 2356888999999999998654321
Q ss_pred C--------CCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccc
Q 016589 167 L--------HGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 167 ~--------~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
. -+.. ..++.++-+..+.+..+-. +-++|.+-|+|+||++++. ..+++|+ -++..|.-+|..+
T Consensus 693 kFE~~ik~kmGqV-E~eDQVeglq~Laeq~gfi-dmdrV~vhGWSYGGYLSlm----~L~~~P~---IfrvAIAGapVT~ 763 (867)
T KOG2281|consen 693 KFESHIKKKMGQV-EVEDQVEGLQMLAEQTGFI-DMDRVGVHGWSYGGYLSLM----GLAQYPN---IFRVAIAGAPVTD 763 (867)
T ss_pred hhHHHHhhccCee-eehhhHHHHHHHHHhcCcc-cchheeEeccccccHHHHH----HhhcCcc---eeeEEeccCccee
Confidence 1 1111 3444444444444433211 3457999999999999999 9999998 5666777666654
Q ss_pred cCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCcc
Q 016589 239 VEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVP 318 (386)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 318 (386)
....... ...++..-|............ ....+.+..-+-.
T Consensus 764 W~~YDTg--------------------------------YTERYMg~P~~nE~gY~agSV-------~~~VeklpdepnR 804 (867)
T KOG2281|consen 764 WRLYDTG--------------------------------YTERYMGYPDNNEHGYGAGSV-------AGHVEKLPDEPNR 804 (867)
T ss_pred eeeeccc--------------------------------chhhhcCCCccchhcccchhH-------HHHHhhCCCCCce
Confidence 3211000 000000000000000000000 0113344444556
Q ss_pred EEEEeeCCCCccChHHHHHHHHHhhcCC--CcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 319 FFVLHGTGDKVTDPLASQDLYNEAASRF--KDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 319 ~lii~G~~D~~v~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
.|++||--|..|...+...+...+...+ -++.+||+.-|.+-..+...-.-..+..|+++
T Consensus 805 LlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 805 LLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred EEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 8999999999999998888888775433 47899999999876554555666678888875
No 123
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.33 E-value=2.7e-11 Score=104.29 Aligned_cols=224 Identities=20% Similarity=0.212 Sum_probs=128.4
Q ss_pred CceEEEEEecCCCC------CCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCC--CCCCCCC----CCC-CC
Q 016589 107 RNALFCRSWIPVSG------ELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGH--GGSDGLH----GYV-PS 173 (386)
Q Consensus 107 g~~l~~~~~~p~~~------~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~--G~S~~~~----~~~-~~ 173 (386)
+.++...++.|... ...|+|++-||.+++...|.++++.|++.||.|.++|.+|- |..+... .+. ..
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~ 128 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAE 128 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhh
Confidence 55666666666543 25799999999999999999999999999999999999984 3332211 110 12
Q ss_pred hHHHHHHHHHHHHHHHHh---C------CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEE---EcCcccccCC
Q 016589 174 LDHVVADTGAFLEKIKLE---N------PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIV---LSAPALRVEP 241 (386)
Q Consensus 174 ~~~~~~d~~~~l~~l~~~---~------~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lv---l~~p~~~~~~ 241 (386)
+-+...|+..+|+++... . +..+|.++|||+||+.++. ++....+.......+. .++.......
T Consensus 129 ~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~----laGA~~~~~~~~~~C~~~~~~~~~~~~~~ 204 (365)
T COG4188 129 WWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAME----LAGAELDAEALLQHCESASRICLDPPGLN 204 (365)
T ss_pred hhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHH----hccccccHHHHHHHhhhhhhcccCCCCcC
Confidence 334577888888887665 1 2347999999999999999 5555443111000000 1111111100
Q ss_pred CCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEE
Q 016589 242 AHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFV 321 (386)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~li 321 (386)
...+........+... . ...++........++.... . .-..-+.+++.|+++
T Consensus 205 ----~~~l~q~~av~~~~~~---~------~~rDpriravvA~~p~~~~-----~----------Fg~tgl~~v~~P~~~ 256 (365)
T COG4188 205 ----GRLLNQCAAVWLPRQA---Y------DLRDPRIRAVVAINPALGM-----I----------FGTTGLVKVTDPVLL 256 (365)
T ss_pred ----hhhhccccccccchhh---h------ccccccceeeeeccCCccc-----c----------cccccceeeecceee
Confidence 0000000000000000 0 0000000000000110000 0 013456788999999
Q ss_pred EeeCCCCccChHH-HHHHHHHhhcCCCcEEEcCCCCCcccCC
Q 016589 322 LHGTGDKVTDPLA-SQDLYNEAASRFKDIKLYEGLLHDLLFE 362 (386)
Q Consensus 322 i~G~~D~~v~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 362 (386)
+.|..|...|+.. .......+++..+.+..+|++.|+-+.+
T Consensus 257 ~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~ 298 (365)
T COG4188 257 AAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLE 298 (365)
T ss_pred ecccccccCCcccccccccccCCcchhheeecCCCccccccc
Confidence 9999999777543 4455666776555788889999998887
No 124
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.33 E-value=1.1e-10 Score=99.12 Aligned_cols=120 Identities=18% Similarity=0.186 Sum_probs=92.5
Q ss_pred eccCCceEEEEEecCCCC---CCceEEEEECCCCCChhhHHHHHHHHHhC---C------CeEEEeCCCCCCCCCCCCCC
Q 016589 103 FGVKRNALFCRSWIPVSG---ELKGILIIIHGLNEHSGRYAQFARQLTSC---N------FGVYAMDWIGHGGSDGLHGY 170 (386)
Q Consensus 103 ~~~~g~~l~~~~~~p~~~---~~~p~vv~lHG~~~~~~~~~~~~~~L~~~---G------~~vi~~D~~G~G~S~~~~~~ 170 (386)
+...|.+||+....|++. +.--+++++|||+|+-..|-.++..|.+. | |.||++.+||+|.|+.+...
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~ 208 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT 208 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC
Confidence 345799999998877632 23347999999999999999999988754 3 78999999999999987654
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEc
Q 016589 171 VPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLS 233 (386)
Q Consensus 171 ~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~ 233 (386)
-.+....+.-+..++-.++- .++.+-|-.||+.++.. +|..+|+ +|.|+-+.
T Consensus 209 GFn~~a~ArvmrkLMlRLg~----nkffiqGgDwGSiI~sn----lasLyPe---nV~GlHln 260 (469)
T KOG2565|consen 209 GFNAAATARVMRKLMLRLGY----NKFFIQGGDWGSIIGSN----LASLYPE---NVLGLHLN 260 (469)
T ss_pred CccHHHHHHHHHHHHHHhCc----ceeEeecCchHHHHHHH----HHhhcch---hhhHhhhc
Confidence 34554545555555544443 45999999999999999 9999999 88776553
No 125
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.32 E-value=3.1e-11 Score=93.97 Aligned_cols=193 Identities=11% Similarity=0.097 Sum_probs=126.5
Q ss_pred eEEEEEecCCCCCCceEEEEECCCCC---ChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 016589 109 ALFCRSWIPVSGELKGILIIIHGLNE---HSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFL 185 (386)
Q Consensus 109 ~l~~~~~~p~~~~~~p~vv~lHG~~~---~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l 185 (386)
+-...+|+|.. ..+..||+||.-. +...--..+..+.++||+|..++|- .++.. .+++..+.+....+
T Consensus 55 ~q~VDIwg~~~--~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q~----htL~qt~~~~~~gv 125 (270)
T KOG4627|consen 55 RQLVDIWGSTN--QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQV----HTLEQTMTQFTHGV 125 (270)
T ss_pred ceEEEEecCCC--CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCccc----ccHHHHHHHHHHHH
Confidence 55678888854 3589999999643 3333334556666889999999863 33321 27888888888888
Q ss_pred HHHHHhCCCC-CEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccC
Q 016589 186 EKIKLENPTV-PCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKG 264 (386)
Q Consensus 186 ~~l~~~~~~~-~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (386)
+++....++. .+.+-|||.|++++.. +..+..+ .+|.|+++.++.++....... ...
T Consensus 126 ~filk~~~n~k~l~~gGHSaGAHLa~q----av~R~r~--prI~gl~l~~GvY~l~EL~~t----------e~g------ 183 (270)
T KOG4627|consen 126 NFILKYTENTKVLTFGGHSAGAHLAAQ----AVMRQRS--PRIWGLILLCGVYDLRELSNT----------ESG------ 183 (270)
T ss_pred HHHHHhcccceeEEEcccchHHHHHHH----HHHHhcC--chHHHHHHHhhHhhHHHHhCC----------ccc------
Confidence 8887766544 4666789999999998 4443211 279999999988755321100 000
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhc
Q 016589 265 ANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAAS 344 (386)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~ 344 (386)
. ......+.. ....+ ....+..++.|+|++.|++|.---.++.+.+...+..
T Consensus 184 -~----dlgLt~~~a--e~~Sc---------------------dl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~ 235 (270)
T KOG4627|consen 184 -N----DLGLTERNA--ESVSC---------------------DLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK 235 (270)
T ss_pred -c----ccCcccchh--hhcCc---------------------cHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh
Confidence 0 000000000 00000 1234567889999999999986667788888888766
Q ss_pred CCCcEEEcCCCCCcccCC
Q 016589 345 RFKDIKLYEGLLHDLLFE 362 (386)
Q Consensus 345 ~~~~~~~~~~~gH~~~~~ 362 (386)
+.+..+++.+|+-..+
T Consensus 236 --a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 236 --ASFTLFKNYDHYDIIE 251 (270)
T ss_pred --cceeecCCcchhhHHH
Confidence 8999999999987665
No 126
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.30 E-value=1.9e-10 Score=91.33 Aligned_cols=185 Identities=14% Similarity=0.046 Sum_probs=116.6
Q ss_pred CceEEEEECCCCCChhhHHH----HHHHHHhCCCeEEEeCCCC----CCCCC--C------CC-------C-------CC
Q 016589 122 LKGILIIIHGLNEHSGRYAQ----FARQLTSCNFGVYAMDWIG----HGGSD--G------LH-------G-------YV 171 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~~~----~~~~L~~~G~~vi~~D~~G----~G~S~--~------~~-------~-------~~ 171 (386)
.++.|||+||+-.+...|.. +.+.|.+. +..+.+|-|- -+.++ . +. . ..
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 35789999999998888753 44555554 7777777662 01111 0 00 0 00
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCcc-----ccceeEEEEcCcccccCCCCchh
Q 016589 172 PSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHI-----EAMLEGIVLSAPALRVEPAHPIV 246 (386)
Q Consensus 172 ~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~-----~~~v~~lvl~~p~~~~~~~~~~~ 246 (386)
......-+.+..+.+++..+.|. =.|+|.|.|+.++.. ++...+.. ...++-+|+++++.......
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~----l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~--- 153 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAAL----LAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL--- 153 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHH----hhcccccCCcccCCCCeEEEEEEecCCCCcchh---
Confidence 01111223355556666666543 379999999999988 55521110 01367788888764431000
Q ss_pred hhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCC
Q 016589 247 GAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTG 326 (386)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 326 (386)
+-......+++|.|.|.|+.
T Consensus 154 ------------------------------------------------------------~~~~~~~~i~~PSLHi~G~~ 173 (230)
T KOG2551|consen 154 ------------------------------------------------------------DESAYKRPLSTPSLHIFGET 173 (230)
T ss_pred ------------------------------------------------------------hhhhhccCCCCCeeEEeccc
Confidence 01223357899999999999
Q ss_pred CCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhcC
Q 016589 327 DKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLGC 382 (386)
Q Consensus 327 D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 382 (386)
|.++|...+..+++.+.+ ..+..-| +||.... .....+.|.+||......
T Consensus 174 D~iv~~~~s~~L~~~~~~--a~vl~Hp-ggH~VP~---~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 174 DTIVPSERSEQLAESFKD--ATVLEHP-GGHIVPN---KAKYKEKIADFIQSFLQE 223 (230)
T ss_pred ceeecchHHHHHHHhcCC--CeEEecC-CCccCCC---chHHHHHHHHHHHHHHHh
Confidence 999999999999999987 4444445 5897664 446778888888776543
No 127
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.29 E-value=3.8e-11 Score=98.87 Aligned_cols=159 Identities=16% Similarity=0.194 Sum_probs=103.2
Q ss_pred ccCCceEEEEEecCCC---CCC-ceEEEEECCCCCChhhHH-HHHH-------HHHhCCCeEEEeCCCC-CCCCCCCCCC
Q 016589 104 GVKRNALFCRSWIPVS---GEL-KGILIIIHGLNEHSGRYA-QFAR-------QLTSCNFGVYAMDWIG-HGGSDGLHGY 170 (386)
Q Consensus 104 ~~~g~~l~~~~~~p~~---~~~-~p~vv~lHG~~~~~~~~~-~~~~-------~L~~~G~~vi~~D~~G-~G~S~~~~~~ 170 (386)
...|.+|.|+.|.|.+ ++. .|.|||+||.+.....-. .+.. ...+.++-|+++.|-- +-.++.
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~---- 243 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE---- 243 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc----
Confidence 3568899999999954 233 499999999987655422 2211 1112234455555321 111111
Q ss_pred CCChHHHHHHHHHHHH-HHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhh
Q 016589 171 VPSLDHVVADTGAFLE-KIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVG 247 (386)
Q Consensus 171 ~~~~~~~~~d~~~~l~-~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~ 247 (386)
..........++++ .+...+ +..+|+++|.|+||+.++. ++.++|+ .+.+.+++++..+.
T Consensus 244 --~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~a----l~~kfPd---fFAaa~~iaG~~d~-------- 306 (387)
T COG4099 244 --KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWA----LAEKFPD---FFAAAVPIAGGGDR-------- 306 (387)
T ss_pred --ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHH----HHHhCch---hhheeeeecCCCch--------
Confidence 12233344444444 454444 3458999999999999999 9999999 79999998875331
Q ss_pred hHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCC-CccEEEEeeCC
Q 016589 248 AVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSV-SVPFFVLHGTG 326 (386)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~G~~ 326 (386)
...++.+ +.|+.++|+.+
T Consensus 307 -------------------------------------------------------------v~lv~~lk~~piWvfhs~d 325 (387)
T COG4099 307 -------------------------------------------------------------VYLVRTLKKAPIWVFHSSD 325 (387)
T ss_pred -------------------------------------------------------------hhhhhhhccCceEEEEecC
Confidence 0011112 57999999999
Q ss_pred CCccChHHHHHHHHHhhc
Q 016589 327 DKVTDPLASQDLYNEAAS 344 (386)
Q Consensus 327 D~~v~~~~~~~~~~~~~~ 344 (386)
|.++|.+.++-.++.+..
T Consensus 326 Dkv~Pv~nSrv~y~~lk~ 343 (387)
T COG4099 326 DKVIPVSNSRVLYERLKA 343 (387)
T ss_pred CCccccCcceeehHHHHh
Confidence 999999888777777654
No 128
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.28 E-value=2.5e-10 Score=98.97 Aligned_cols=229 Identities=18% Similarity=0.204 Sum_probs=118.3
Q ss_pred HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhC------CCCCEEEEEechhhHHHHhhhh
Q 016589 141 QFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLEN------PTVPCFLFGHSTGGAVVLKRTF 214 (386)
Q Consensus 141 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~------~~~~i~lvGhS~Gg~~a~~~~~ 214 (386)
.++..+.++||.|+++||.|.|. .+. .-......+.+.++..+... ...++.++|||.||..++.
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~-----~y~-~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~--- 87 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT-----PYL-NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALW--- 87 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC-----ccc-CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHH---
Confidence 35566668999999999999986 221 22334555555555554322 2458999999999999988
Q ss_pred hHhhc----CCccccceeEEEEcCcccccCCC------CchhhhHhhh---hhhhcCCcc--ccCCCC-CC-------CC
Q 016589 215 VQAAS----YPHIEAMLEGIVLSAPALRVEPA------HPIVGAVAPL---FSLVVPKYQ--FKGANK-RG-------VP 271 (386)
Q Consensus 215 ~~a~~----~p~~~~~v~~lvl~~p~~~~~~~------~~~~~~~~~~---~~~~~~~~~--~~~~~~-~~-------~~ 271 (386)
.+.. .|++...+.+.+..+|..+.... .......... +....+.+. ...... .. ..
T Consensus 88 -AA~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~ 166 (290)
T PF03583_consen 88 -AAELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDART 166 (290)
T ss_pred -HHHHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHh
Confidence 4433 35542237788887776553211 0011111100 111111111 000000 00 00
Q ss_pred CCCCHHHHHHHhcCCCC-----c-cCCcchhHHHHHHHHHHHHHh---hccCCCccEEEEeeCCCCccChHHHHHHHHHh
Q 016589 272 VSRDPAALLAKYSDPLV-----Y-TGPIRVRTGHEILRLSSYLKR---NFKSVSVPFFVLHGTGDKVTDPLASQDLYNEA 342 (386)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~---~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~ 342 (386)
.+... ........... . ...........+.....+..- .-...++|+++.+|..|.++|+....++.+++
T Consensus 167 ~c~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~ 245 (290)
T PF03583_consen 167 RCLAD-IVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKW 245 (290)
T ss_pred hhHHH-HHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHH
Confidence 00000 00000000000 0 000000000011111111100 11233789999999999999999999999998
Q ss_pred hcCC---CcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhcCCc
Q 016589 343 ASRF---KDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLGCSI 384 (386)
Q Consensus 343 ~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~~ 384 (386)
+..+ ++++.+++.+|..... .-....++||.++++..+
T Consensus 246 c~~G~a~V~~~~~~~~~H~~~~~----~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 246 CAAGGADVEYVRYPGGGHLGAAF----ASAPDALAWLDDRFAGKP 286 (290)
T ss_pred HHcCCCCEEEEecCCCChhhhhh----cCcHHHHHHHHHHHCCCC
Confidence 7655 4566778899965322 124677899999986543
No 129
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.27 E-value=1.1e-10 Score=106.55 Aligned_cols=136 Identities=17% Similarity=0.093 Sum_probs=104.5
Q ss_pred cccceeEeccCCceEEEEEecCCCCCCceEEEEEC--CCCCC---hhhHHHHHH---HHHhCCCeEEEeCCCCCCCCCCC
Q 016589 96 RWSTSLFFGVKRNALFCRSWIPVSGELKGILIIIH--GLNEH---SGRYAQFAR---QLTSCNFGVYAMDWIGHGGSDGL 167 (386)
Q Consensus 96 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lH--G~~~~---~~~~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~ 167 (386)
......+...||.+|+..+|.|.+.++.|+++..+ .+.-. ...-..... .++.+||.|+..|.||.|.|.+.
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~ 97 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV 97 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc
Confidence 34567889999999999999999888899999999 33222 111122233 57889999999999999999987
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhC-CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccC
Q 016589 168 HGYVPSLDHVVADTGAFLEKIKLEN-PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 168 ~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~ 240 (386)
-....+ +.++|-.+.|+++..+. .+.+|..+|.|++|...+. +|+..|. .+++++...+..+..
T Consensus 98 ~~~~~~--~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~----~Aa~~pP---aLkai~p~~~~~D~y 162 (563)
T COG2936 98 FDPESS--REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLA----AAALQPP---ALKAIAPTEGLVDRY 162 (563)
T ss_pred cceecc--ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHH----HHhcCCc---hheeecccccccccc
Confidence 544333 34678888888887654 5668999999999999999 8887776 688888887776643
No 130
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.26 E-value=6.2e-11 Score=98.13 Aligned_cols=171 Identities=16% Similarity=0.182 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhh
Q 016589 179 ADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLV 256 (386)
Q Consensus 179 ~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 256 (386)
+-+.+++++|.... ..++|.|+|.|.||-+|+. +|+.+|+ |+++|.++|............... ..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALl----lAs~~~~----i~avVa~~ps~~~~~~~~~~~~~~----~~ 71 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALL----LASRFPQ----ISAVVAISPSSVVFQGIGFYRDSS----KP 71 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHH----HHHHSSS----EEEEEEES--SB--SSEEEETTE------E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHH----HHhcCCC----ccEEEEeCCceeEecchhcccCCC----cc
Confidence 34556777776653 2358999999999999999 9999996 999999988765433211111000 00
Q ss_pred cCCccccCC----CCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccCh
Q 016589 257 VPKYQFKGA----NKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDP 332 (386)
Q Consensus 257 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~ 332 (386)
.+....... .......... ........ ......-.+.++++|+|++.|++|.+.|.
T Consensus 72 lp~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--------------~~~~a~IpvE~i~~piLli~g~dD~~WpS 131 (213)
T PF08840_consen 72 LPYLPFDISKFSWNEPGLLRSRY------AFELADDK--------------AVEEARIPVEKIKGPILLISGEDDQIWPS 131 (213)
T ss_dssp E----B-GGG-EE-TTS-EE-TT-------B--TTTG--------------GGCCCB--GGG--SEEEEEEETT-SSS-H
T ss_pred CCcCCcChhhceecCCcceehhh------hhhccccc--------------ccccccccHHHcCCCEEEEEeCCCCccch
Confidence 000000000 0000000000 00000000 00000123567899999999999999986
Q ss_pred HHH-HHHHHHhhcC----CCcEEEcCCCCCcccCC------c---------------------cHHHHHHHHHHHHhhhh
Q 016589 333 LAS-QDLYNEAASR----FKDIKLYEGLLHDLLFE------L---------------------ERDEVAQDIIVWLEKKL 380 (386)
Q Consensus 333 ~~~-~~~~~~~~~~----~~~~~~~~~~gH~~~~~------~---------------------~~~~~~~~i~~fl~~~~ 380 (386)
... +.+.+++... ..++..||++||.+... . ..++.++.+++||++++
T Consensus 132 ~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L 211 (213)
T PF08840_consen 132 SEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHL 211 (213)
T ss_dssp HHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 654 4445555432 35678899999985321 0 24678999999999988
Q ss_pred c
Q 016589 381 G 381 (386)
Q Consensus 381 ~ 381 (386)
+
T Consensus 212 ~ 212 (213)
T PF08840_consen 212 G 212 (213)
T ss_dssp -
T ss_pred C
Confidence 5
No 131
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.23 E-value=1.5e-10 Score=96.07 Aligned_cols=174 Identities=17% Similarity=0.168 Sum_probs=83.5
Q ss_pred CceEEEEECCCCCChhhHHHHHH----HHHhCCCeEEEeCCCCC-----CCCC-----------CCC--CCC------CC
Q 016589 122 LKGILIIIHGLNEHSGRYAQFAR----QLTSCNFGVYAMDWIGH-----GGSD-----------GLH--GYV------PS 173 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~~~~~~----~L~~~G~~vi~~D~~G~-----G~S~-----------~~~--~~~------~~ 173 (386)
.++.||++||++.+...|+.... .|.+.++..+.+|-|-- |-.. ..+ .+. ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 36899999999999999876544 44342688888886521 1110 000 000 01
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCc-cccceeEEEEcCcccccCCCCchhhhHhhh
Q 016589 174 LDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPH-IEAMLEGIVLSAPALRVEPAHPIVGAVAPL 252 (386)
Q Consensus 174 ~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~-~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~ 252 (386)
.....+.+..+.+.+..+.|. ..|+|+|+||.+|..++.+.....++ ....++.+|+++++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPf--dGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~--------- 151 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPF--DGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY--------- 151 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G---------
T ss_pred ccCHHHHHHHHHHHHHhcCCe--EEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh---------
Confidence 222333333444444444321 58999999999998822221111110 112478889988765432110
Q ss_pred hhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccCh
Q 016589 253 FSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDP 332 (386)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~ 332 (386)
.+ .. .-..|++|+|.|+|++|.++++
T Consensus 152 -------------------------------~~----------------------~~-~~~~i~iPtlHv~G~~D~~~~~ 177 (212)
T PF03959_consen 152 -------------------------------QE----------------------LY-DEPKISIPTLHVIGENDPVVPP 177 (212)
T ss_dssp -------------------------------TT----------------------TT---TT---EEEEEEETT-SSS-H
T ss_pred -------------------------------hh----------------------hh-ccccCCCCeEEEEeCCCCCcch
Confidence 00 00 1245789999999999999999
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCcccCC
Q 016589 333 LASQDLYNEAASRFKDIKLYEGLLHDLLFE 362 (386)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 362 (386)
+.++.+.+.+.+. .+++..++ ||.+...
T Consensus 178 ~~s~~L~~~~~~~-~~v~~h~g-GH~vP~~ 205 (212)
T PF03959_consen 178 ERSEALAEMFDPD-ARVIEHDG-GHHVPRK 205 (212)
T ss_dssp HHHHHHHHHHHHH-EEEEEESS-SSS----
T ss_pred HHHHHHHHhccCC-cEEEEECC-CCcCcCC
Confidence 9999999988764 55555565 8876654
No 132
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.22 E-value=4.1e-10 Score=90.56 Aligned_cols=265 Identities=17% Similarity=0.160 Sum_probs=145.0
Q ss_pred EeccCCceEEEEEecCC---CCCCceEEEEECCCCCChhhHHHHHHHHHhC-C--CeEEEeCCCCCCCCCCC--------
Q 016589 102 FFGVKRNALFCRSWIPV---SGELKGILIIIHGLNEHSGRYAQFARQLTSC-N--FGVYAMDWIGHGGSDGL-------- 167 (386)
Q Consensus 102 ~~~~~g~~l~~~~~~p~---~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~-G--~~vi~~D~~G~G~S~~~-------- 167 (386)
+.+..|..++...++|. .+..++.|++++|.+|....|..++..|... + +.++.+..-||-.-+..
T Consensus 5 ~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~ 84 (301)
T KOG3975|consen 5 EYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHT 84 (301)
T ss_pred eeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccc
Confidence 34445555544444442 3356899999999999999999999888643 2 55888888888654311
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhh
Q 016589 168 HGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVG 247 (386)
Q Consensus 168 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~ 247 (386)
....++++++++.-.++++..... +.+++++|||.|+++.+. ..-.. ...-.|.+++++-|...--...+...
T Consensus 85 ~~eifsL~~QV~HKlaFik~~~Pk--~~ki~iiGHSiGaYm~Lq----il~~~-k~~~~vqKa~~LFPTIerM~eSpnG~ 157 (301)
T KOG3975|consen 85 NEEIFSLQDQVDHKLAFIKEYVPK--DRKIYIIGHSIGAYMVLQ----ILPSI-KLVFSVQKAVLLFPTIERMHESPNGI 157 (301)
T ss_pred cccccchhhHHHHHHHHHHHhCCC--CCEEEEEecchhHHHHHH----Hhhhc-ccccceEEEEEecchHHHHhcCCCce
Confidence 113346777777766666654332 357999999999999999 44422 11225777777766642211111100
Q ss_pred hHhhhhhhh------c--------CCccccCCCCCCCCCCCCHHHHH---HHhcCCCCccCCcchhHHHHHHHHHHHHHh
Q 016589 248 AVAPLFSLV------V--------PKYQFKGANKRGVPVSRDPAALL---AKYSDPLVYTGPIRVRTGHEILRLSSYLKR 310 (386)
Q Consensus 248 ~~~~~~~~~------~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (386)
.+......+ . +.+...-...........+.+.. -.+..+..... .......++........+
T Consensus 158 ~~t~~l~~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn-~v~la~qEm~eV~~~d~e 236 (301)
T KOG3975|consen 158 RLTKVLRYLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRN-SVGLAAQEMEEVTTRDIE 236 (301)
T ss_pred EeeeeeeeehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHH-HhhhchHHHHHHHHhHHH
Confidence 000000000 0 00000000000011111111111 00111110000 000111122222222233
Q ss_pred hccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHH
Q 016589 311 NFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWL 376 (386)
Q Consensus 311 ~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 376 (386)
..++-.+-+.+.+|+.|.+||.+....+.+.++..+.++-+ ++..|.+... ..+..+..+.+.+
T Consensus 237 ~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~-~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 237 YCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVK-HAQYMANAVFDMI 300 (301)
T ss_pred HHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeec-ccHHHHHHHHHhh
Confidence 34444567899999999999999999999999875566655 7899988776 6777777776654
No 133
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.21 E-value=8.1e-09 Score=95.42 Aligned_cols=133 Identities=18% Similarity=0.154 Sum_probs=90.5
Q ss_pred CceEEEEEecCCC-CCCceEEEEECCCCCChhhHHHHHH------------------HHHhCCCeEEEeCCC-CCCCCCC
Q 016589 107 RNALFCRSWIPVS-GELKGILIIIHGLNEHSGRYAQFAR------------------QLTSCNFGVYAMDWI-GHGGSDG 166 (386)
Q Consensus 107 g~~l~~~~~~p~~-~~~~p~vv~lHG~~~~~~~~~~~~~------------------~L~~~G~~vi~~D~~-G~G~S~~ 166 (386)
+..++|..+.... ++..|+||+++|.+|.+..+..+.+ .+.+ -..++.+|.| |+|.|..
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S~~ 138 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFSYA 138 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcccC
Confidence 6789999887543 3567999999999988765422210 1212 2679999975 8888865
Q ss_pred CCC-CCCChHHHHHHHHHHHHHHHHhCCC---CCEEEEEechhhHHHHhhhhhHhhcCC---ccccceeEEEEcCccccc
Q 016589 167 LHG-YVPSLDHVVADTGAFLEKIKLENPT---VPCFLFGHSTGGAVVLKRTFVQAASYP---HIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 167 ~~~-~~~~~~~~~~d~~~~l~~l~~~~~~---~~i~lvGhS~Gg~~a~~~~~~~a~~~p---~~~~~v~~lvl~~p~~~~ 239 (386)
... ...+.++.++|+.++++......+. .+++|+|||+||..+-.++..+..... ...-.++|+++.+|..+.
T Consensus 139 ~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 139 DKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 432 2335678899999999987665543 689999999999998772222221111 112368899998888755
Q ss_pred C
Q 016589 240 E 240 (386)
Q Consensus 240 ~ 240 (386)
.
T Consensus 219 ~ 219 (462)
T PTZ00472 219 Y 219 (462)
T ss_pred h
Confidence 4
No 134
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.20 E-value=1.2e-09 Score=91.77 Aligned_cols=211 Identities=18% Similarity=0.157 Sum_probs=124.2
Q ss_pred CceEEEEECCCCCChhhHHHHHHHHH-hCCCe----EEEeCCCCC----CC----CCCC------CCCC-CChHHHHHHH
Q 016589 122 LKGILIIIHGLNEHSGRYAQFARQLT-SCNFG----VYAMDWIGH----GG----SDGL------HGYV-PSLDHVVADT 181 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~~~~~~~L~-~~G~~----vi~~D~~G~----G~----S~~~------~~~~-~~~~~~~~d~ 181 (386)
...+.||+||++++...+..++..+. +.|.. ++-++--|. |. ...| .... .++...+..+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34689999999999999999999997 66542 333333332 21 1111 1111 2577889999
Q ss_pred HHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccc--cceeEEEEcCcccccCCCCchhhhHhhhhhhhcCC
Q 016589 182 GAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIE--AMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPK 259 (386)
Q Consensus 182 ~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~--~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 259 (386)
..++.+|...+.-.++-+|||||||..++. ++..+.... .++..+|.+++++...........
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~----yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~----------- 154 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTY----YLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN----------- 154 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHH----HHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT-----------
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHH----HHHHhccCCCCcccceEEEeccccCccccccccch-----------
Confidence 999999999998889999999999999998 776643211 158899998877654321110000
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHH-HhhccCCCccEEEEeeC------CCCccCh
Q 016589 260 YQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYL-KRNFKSVSVPFFVLHGT------GDKVTDP 332 (386)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~lii~G~------~D~~v~~ 332 (386)
....... ++.. ....++..... ...+ .-.+.+|-|.|. .|..||.
T Consensus 155 --~~~~~~~----------------------gp~~---~~~~y~~l~~~~~~~~-p~~i~VLnI~G~~~~g~~sDG~V~~ 206 (255)
T PF06028_consen 155 --QNDLNKN----------------------GPKS---MTPMYQDLLKNRRKNF-PKNIQVLNIYGDLEDGSNSDGIVPN 206 (255)
T ss_dssp --TT-CSTT-----------------------BSS-----HHHHHHHHTHGGGS-TTT-EEEEEEEESBTTCSBTSSSBH
T ss_pred --hhhhccc----------------------CCcc---cCHHHHHHHHHHHhhC-CCCeEEEEEecccCCCCCCCeEEeH
Confidence 0000000 0000 00111111111 1122 225689999998 8999999
Q ss_pred HHHHHHHHHhhcCCCcE--EEcC--CCCCcccCCccHHHHHHHHHHHHh
Q 016589 333 LASQDLYNEAASRFKDI--KLYE--GLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 333 ~~~~~~~~~~~~~~~~~--~~~~--~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
..+..+...+.+....+ .++. ++.|.-+.+ ..++.+.|.+||-
T Consensus 207 ~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lhe--N~~V~~~I~~FLw 253 (255)
T PF06028_consen 207 ASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHE--NPQVDKLIIQFLW 253 (255)
T ss_dssp HHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGC--CHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhcccCceEEEEEECCCCccccCCC--CHHHHHHHHHHhc
Confidence 99888877776533333 3444 468977665 5678899999984
No 135
>PRK04940 hypothetical protein; Provisional
Probab=99.18 E-value=6.3e-09 Score=81.60 Aligned_cols=174 Identities=16% Similarity=0.149 Sum_probs=100.2
Q ss_pred EEEECCCCCChhhHHHHHHHHH--hCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEec
Q 016589 126 LIIIHGLNEHSGRYAQFARQLT--SCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHS 203 (386)
Q Consensus 126 vv~lHG~~~~~~~~~~~~~~L~--~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS 203 (386)
||++|||.++..+-..-++.+. ..+.+++ +++ . ....+..+.+.+.+..+......+++.+||.|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~-----~------~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS-----T------LHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC-----C------CCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 7999999998887221122221 2223333 221 0 13344445555555543221111368999999
Q ss_pred hhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHh
Q 016589 204 TGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKY 283 (386)
Q Consensus 204 ~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (386)
+||+.|.. ++.++. + ..|+++|++.+.. .+......
T Consensus 69 LGGyyA~~----La~~~g-----~-~aVLiNPAv~P~~------~L~~~ig~---------------------------- 104 (180)
T PRK04940 69 LGGYWAER----IGFLCG-----I-RQVIFNPNLFPEE------NMEGKIDR---------------------------- 104 (180)
T ss_pred hHHHHHHH----HHHHHC-----C-CEEEECCCCChHH------HHHHHhCC----------------------------
Confidence 99999999 888876 3 3788899876521 11111000
Q ss_pred cCCCCccCCcchhHHHHHHHHHHHHHhhcc-CCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCC
Q 016589 284 SDPLVYTGPIRVRTGHEILRLSSYLKRNFK-SVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFE 362 (386)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 362 (386)
+..+. ...+...+.++ +-.-..+++..+.|.+.+...+.+.+... .++.+.+|++|.+-
T Consensus 105 --~~~y~------------~~~~~h~~eL~~~~p~r~~vllq~gDEvLDyr~a~~~y~~~----y~~~v~~GGdH~f~-- 164 (180)
T PRK04940 105 --PEEYA------------DIATKCVTNFREKNRDRCLVILSRNDEVLDSQRTAEELHPY----YEIVWDEEQTHKFK-- 164 (180)
T ss_pred --Ccchh------------hhhHHHHHHhhhcCcccEEEEEeCCCcccCHHHHHHHhccC----ceEEEECCCCCCCC--
Confidence 00000 00001111222 12234699999999999998877665332 16888899999543
Q ss_pred ccHHHHHHHHHHHHh
Q 016589 363 LERDEVAQDIIVWLE 377 (386)
Q Consensus 363 ~~~~~~~~~i~~fl~ 377 (386)
+.++..+.|.+|++
T Consensus 165 -~fe~~l~~I~~F~~ 178 (180)
T PRK04940 165 -NISPHLQRIKAFKT 178 (180)
T ss_pred -CHHHHHHHHHHHHh
Confidence 57788999999985
No 136
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.17 E-value=4.9e-10 Score=93.31 Aligned_cols=109 Identities=19% Similarity=0.205 Sum_probs=74.6
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHh--------CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhC--
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTS--------CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLEN-- 192 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~--------~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~-- 192 (386)
+.+|||+||.+++...++.+...+.+ ..++++++|+......- .+ ..+.+..+-+.+.++.+...+
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~--~g--~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF--HG--RTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc--cc--ccHHHHHHHHHHHHHHHHHhhhh
Confidence 46899999999999988888776632 25889999987643211 11 144455555666666654443
Q ss_pred ---CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 193 ---PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 193 ---~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
+..++++|||||||.++-. ++...+.....|+.+|.++.+...
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~----~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARS----ALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHH----HHhccccccccEEEEEEEcCCCCC
Confidence 5668999999999999988 444433223379999988766544
No 137
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.16 E-value=3.8e-09 Score=80.98 Aligned_cols=172 Identities=18% Similarity=0.104 Sum_probs=109.9
Q ss_pred eEEEEECCCCCChhh-HHHHHH-HHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEE
Q 016589 124 GILIIIHGLNEHSGR-YAQFAR-QLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFG 201 (386)
Q Consensus 124 p~vv~lHG~~~~~~~-~~~~~~-~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvG 201 (386)
+.+|++||+.+|... |....+ .|. .+-.+++. + ......+++++.+...+.... +++++|+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~----~a~rveq~-----~---w~~P~~~dWi~~l~~~v~a~~-----~~~vlVA 65 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP----NARRVEQD-----D---WEAPVLDDWIARLEKEVNAAE-----GPVVLVA 65 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc----cchhcccC-----C---CCCCCHHHHHHHHHHHHhccC-----CCeEEEE
Confidence 479999999877643 544332 221 12223322 1 112366777777776666551 2599999
Q ss_pred echhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHH
Q 016589 202 HSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLA 281 (386)
Q Consensus 202 hS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (386)
||+|+..++. ++.+... .|.|+.+++|+-...+..... .. ..
T Consensus 66 HSLGc~~v~h----~~~~~~~---~V~GalLVAppd~~~~~~~~~-~~--------------------~t---------- 107 (181)
T COG3545 66 HSLGCATVAH----WAEHIQR---QVAGALLVAPPDVSRPEIRPK-HL--------------------MT---------- 107 (181)
T ss_pred ecccHHHHHH----HHHhhhh---ccceEEEecCCCccccccchh-hc--------------------cc----------
Confidence 9999999999 7777666 799999999975332110000 00 00
Q ss_pred HhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccC
Q 016589 282 KYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLF 361 (386)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 361 (386)
.+ ......+.-|.+++...+|++++++.++.+.+.+. ..++....+||..-.
T Consensus 108 --f~-----------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg---s~lv~~g~~GHiN~~ 159 (181)
T COG3545 108 --FD-----------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWG---SALVDVGEGGHINAE 159 (181)
T ss_pred --cC-----------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhcc---Hhheecccccccchh
Confidence 00 11123445699999999999999999999999887 478888888995432
Q ss_pred C--ccHHHHHHHHHHHHhh
Q 016589 362 E--LERDEVAQDIIVWLEK 378 (386)
Q Consensus 362 ~--~~~~~~~~~i~~fl~~ 378 (386)
+ ....+....+.+++.+
T Consensus 160 sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 160 SGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred hcCCCcHHHHHHHHHHhhh
Confidence 2 2356666666666654
No 138
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.07 E-value=4.3e-09 Score=83.23 Aligned_cols=181 Identities=22% Similarity=0.264 Sum_probs=117.2
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCC-----------------CCCCCCCChHHHHHHHHHHH
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSD-----------------GLHGYVPSLDHVVADTGAFL 185 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~-----------------~~~~~~~~~~~~~~d~~~~l 185 (386)
..+||++||.+.+...|..+++.|.-.....+.+.-|-.-.+. ............++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 4589999999999999988888876556666766443211110 00011123444555666666
Q ss_pred HHHHHhC-CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccC
Q 016589 186 EKIKLEN-PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKG 264 (386)
Q Consensus 186 ~~l~~~~-~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (386)
+...... +..+|.+-|.|+||.+++. .+..+|. .+.+++..++........ .+.
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~----~~~~~~~---~l~G~~~~s~~~p~~~~~-------------~~~----- 137 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALY----SALTYPK---ALGGIFALSGFLPRASIG-------------LPG----- 137 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHH----HHhcccc---ccceeeccccccccchhh-------------ccC-----
Confidence 6554433 4557999999999999999 7778876 677777666553211000 000
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhc
Q 016589 265 ANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAAS 344 (386)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~ 344 (386)
.....+ ..|++..||+.|++||....+...+.+..
T Consensus 138 -------------------------------------------~~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~ 172 (206)
T KOG2112|consen 138 -------------------------------------------WLPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKS 172 (206)
T ss_pred -------------------------------------------CccccC--cchhheecccCCceeehHHHHHHHHHHHH
Confidence 000001 67999999999999998877666665543
Q ss_pred C--CCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 345 R--FKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 345 ~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
. ..+++.|+|.+|....+ -.+.+..|+++
T Consensus 173 ~~~~~~f~~y~g~~h~~~~~-----e~~~~~~~~~~ 203 (206)
T KOG2112|consen 173 LGVRVTFKPYPGLGHSTSPQ-----ELDDLKSWIKT 203 (206)
T ss_pred cCCceeeeecCCccccccHH-----HHHHHHHHHHH
Confidence 2 26788899999965432 26678888876
No 139
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.07 E-value=3.9e-09 Score=111.60 Aligned_cols=103 Identities=20% Similarity=0.192 Sum_probs=82.2
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGH 202 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGh 202 (386)
.|+++++||++++...|..+.+.|.. ++.|+.+|++|++.+.. ..++++++++++.+.++.+.. ..+++++||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~---~~p~~l~G~ 1140 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQP---HGPYHLLGY 1140 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCC---CCCEEEEEe
Confidence 47899999999999999999999954 59999999999986532 234899999999888876543 347999999
Q ss_pred chhhHHHHhhhhhHhhcCCccccceeEEEEcCcc
Q 016589 203 STGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 203 S~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
|+||.++.. +|.+.++...++..++++++.
T Consensus 1141 S~Gg~vA~e----~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1141 SLGGTLAQG----IAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred chhhHHHHH----HHHHHHHcCCceeEEEEecCC
Confidence 999999999 777532222278889988764
No 140
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.06 E-value=1.2e-07 Score=80.79 Aligned_cols=103 Identities=18% Similarity=0.255 Sum_probs=77.2
Q ss_pred cCCceEEEEEecCCCCCCceEEEEECCCCCChhhH------HHHHHHHH-hCCCeEEEeCCCCCCCCCCCCCCCCChHHH
Q 016589 105 VKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRY------AQFARQLT-SCNFGVYAMDWIGHGGSDGLHGYVPSLDHV 177 (386)
Q Consensus 105 ~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~------~~~~~~L~-~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~ 177 (386)
.|+..|-.....-++.++...||+.-|.++..+.. +.....++ +.|.+|+.++|||.|.|.+.. +.+++
T Consensus 119 ~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s~~dL 194 (365)
T PF05677_consen 119 YDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----SRKDL 194 (365)
T ss_pred eCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----CHHHH
Confidence 38877765554433345567999999988766551 12233333 558999999999999998764 56999
Q ss_pred HHHHHHHHHHHHHhC---CCCCEEEEEechhhHHHHh
Q 016589 178 VADTGAFLEKIKLEN---PTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 178 ~~d~~~~l~~l~~~~---~~~~i~lvGhS~Gg~~a~~ 211 (386)
+.|-.+.++++..+. +...|++.|||+||.++..
T Consensus 195 v~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 195 VKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred HHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 999999999998643 2357999999999999988
No 141
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.05 E-value=1.9e-09 Score=89.64 Aligned_cols=111 Identities=18% Similarity=0.224 Sum_probs=74.9
Q ss_pred CCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCC------CC--CCCC----------C---------
Q 016589 120 GELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSD------GL--HGYV----------P--------- 172 (386)
Q Consensus 120 ~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~------~~--~~~~----------~--------- 172 (386)
+++.|+|||-||++++...|..++..|+++||.|.+++.|-+-.+. .+ .... .
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 4678999999999999999999999999999999999998653321 00 0000 0
Q ss_pred -ChHHHHHHHHHHHHHHHHhC-----------------------CCCCEEEEEechhhHHHHhhhhhHhhcCCcccccee
Q 016589 173 -SLDHVVADTGAFLEKIKLEN-----------------------PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLE 228 (386)
Q Consensus 173 -~~~~~~~d~~~~l~~l~~~~-----------------------~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~ 228 (386)
....-++.+..+++-+..-. +..++.++|||+||..++. ..+.+. .++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~----~ss~~t----~Fr 266 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIA----SSSSHT----DFR 266 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhh----hhcccc----cee
Confidence 01112334444444332211 1125899999999999988 555555 488
Q ss_pred EEEEcCcccc
Q 016589 229 GIVLSAPALR 238 (386)
Q Consensus 229 ~lvl~~p~~~ 238 (386)
+.|+.+.+..
T Consensus 267 caI~lD~WM~ 276 (399)
T KOG3847|consen 267 CAIALDAWMF 276 (399)
T ss_pred eeeeeeeeec
Confidence 8888887643
No 142
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.05 E-value=2.6e-09 Score=88.81 Aligned_cols=126 Identities=20% Similarity=0.163 Sum_probs=91.1
Q ss_pred ccCCceEEEEEecCCCC-CCceEEEEECCCCCChhhHHHHH--HHHH-hCCCeEEEeCCC-C------CCCCCCCCCCCC
Q 016589 104 GVKRNALFCRSWIPVSG-ELKGILIIIHGLNEHSGRYAQFA--RQLT-SCNFGVYAMDWI-G------HGGSDGLHGYVP 172 (386)
Q Consensus 104 ~~~g~~l~~~~~~p~~~-~~~p~vv~lHG~~~~~~~~~~~~--~~L~-~~G~~vi~~D~~-G------~G~S~~~~~~~~ 172 (386)
..+|.+..|++|.|+.- ++.|.||++||.+++...+.... +.|+ +.||-|+.+|-. + .+.+..+....
T Consensus 41 ~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~- 119 (312)
T COG3509 41 DVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR- 119 (312)
T ss_pred ccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc-
Confidence 35677888999988764 45689999999999888776655 5666 459999999532 1 22221121111
Q ss_pred ChHHHHHHHHHHHHHHHHhCCC--CCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 173 SLDHVVADTGAFLEKIKLENPT--VPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~~~~--~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
.-.+.+..+.+++..+..++.- .+|++.|.|-||.++.. ++..+|+ .+.++..+++..
T Consensus 120 ~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~----lac~~p~---~faa~A~VAg~~ 179 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANR----LACEYPD---IFAAIAPVAGLL 179 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHH----HHhcCcc---cccceeeeeccc
Confidence 1223478888999999888743 48999999999999999 9999999 677777666544
No 143
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.01 E-value=4.9e-07 Score=79.15 Aligned_cols=196 Identities=16% Similarity=0.202 Sum_probs=119.1
Q ss_pred EEEecCC-CCCCceEEEEECCCCCChh---hHHHHHHHHHhCCCeEEEeCCCCC--CCCCC----------CC----CCC
Q 016589 112 CRSWIPV-SGELKGILIIIHGLNEHSG---RYAQFARQLTSCNFGVYAMDWIGH--GGSDG----------LH----GYV 171 (386)
Q Consensus 112 ~~~~~p~-~~~~~p~vv~lHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~--G~S~~----------~~----~~~ 171 (386)
-.+|.|. .++.+..||++||.+.+.. ....+...|.+.|+.++++.+|.- ..... .. ...
T Consensus 75 laL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~ 154 (310)
T PF12048_consen 75 LALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQP 154 (310)
T ss_pred EEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCC
Confidence 3344444 3466789999999998764 357788899999999999999871 10000 00 000
Q ss_pred ----------------CChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCc
Q 016589 172 ----------------PSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAP 235 (386)
Q Consensus 172 ----------------~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p 235 (386)
...+....-+.+++..+.. ++..+++|+||+.|+..++. +.+..+.- .++++|++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~----~la~~~~~--~~daLV~I~a 227 (310)
T PF12048_consen 155 SDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAAR----YLAEKPPP--MPDALVLINA 227 (310)
T ss_pred CCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHH----HHhcCCCc--ccCeEEEEeC
Confidence 0012233344445554443 34556999999999999999 88877651 4889999998
Q ss_pred ccccCCCCchhhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCC
Q 016589 236 ALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSV 315 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 315 (386)
........ ..+.+.+.++
T Consensus 228 ~~p~~~~n--------------------------------------------------------------~~l~~~la~l 245 (310)
T PF12048_consen 228 YWPQPDRN--------------------------------------------------------------PALAEQLAQL 245 (310)
T ss_pred CCCcchhh--------------------------------------------------------------hhHHHHhhcc
Confidence 64332110 1245667889
Q ss_pred CccEEEEeeCCCCccChHHHHHH---HHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhh
Q 016589 316 SVPFFVLHGTGDKVTDPLASQDL---YNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 316 ~~P~lii~G~~D~~v~~~~~~~~---~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 379 (386)
++|+|=|++...... ......- .++....+-+-..+.+..|.... ..+.+.+.|..|++++
T Consensus 246 ~iPvLDi~~~~~~~~-~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~--~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 246 KIPVLDIYSADNPAS-QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG--WQEQLLRRIRGWLKRH 309 (310)
T ss_pred CCCEEEEecCCChHH-HHHHHHHHHHHHhccCCCceeEecCCCCCChhh--HHHHHHHHHHHHHHhh
Confidence 999999998873322 2221111 11111122334455666664322 3344899999999865
No 144
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.99 E-value=9.3e-09 Score=80.73 Aligned_cols=127 Identities=19% Similarity=0.237 Sum_probs=79.1
Q ss_pred CceEEEEEecCCCC---CCceEEEEECCCCCChhhHH--H-HHHHHHhCCCeEEEeCCCCCCCCC--CCCCC--------
Q 016589 107 RNALFCRSWIPVSG---ELKGILIIIHGLNEHSGRYA--Q-FARQLTSCNFGVYAMDWIGHGGSD--GLHGY-------- 170 (386)
Q Consensus 107 g~~l~~~~~~p~~~---~~~p~vv~lHG~~~~~~~~~--~-~~~~L~~~G~~vi~~D~~G~G~S~--~~~~~-------- 170 (386)
+..+.+-+|.|+.. ++-|++.++.|+..+.+.|- . +-+.-.++|+.|+.+|-.-.|..- .+..+
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 55677777777643 44699999999998887753 2 233344779999999964332210 00000
Q ss_pred ---------C--C-ChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccc
Q 016589 171 ---------V--P-SLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 171 ---------~--~-~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
. + -++..++.+.+++..-...-+..++.+.||||||+-|+. .+.++|. +.+++-..+|...
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~----~~Lkn~~---kykSvSAFAPI~N 177 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALT----IYLKNPS---KYKSVSAFAPICN 177 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEE----EEEcCcc---cccceeccccccC
Confidence 0 0 122334444444442111223346999999999999999 8999998 7777776666654
Q ss_pred cC
Q 016589 239 VE 240 (386)
Q Consensus 239 ~~ 240 (386)
+.
T Consensus 178 P~ 179 (283)
T KOG3101|consen 178 PI 179 (283)
T ss_pred cc
Confidence 43
No 145
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.96 E-value=5.6e-08 Score=81.59 Aligned_cols=104 Identities=26% Similarity=0.301 Sum_probs=82.4
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEec
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHS 203 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS 203 (386)
|+++++|+.+|....|..+...|... ..|+.++.||++.-... ..+++++++...+.|..+. |..+++++|||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~Q---P~GPy~L~G~S 73 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQ---PEGPYVLLGWS 73 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhC---CCCCEEEEeec
Confidence 57999999999999999999999776 99999999999852221 2377887777776666555 44589999999
Q ss_pred hhhHHHHhhhhhHhhcCCccccceeEEEEcCcccc
Q 016589 204 TGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 204 ~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
+||.+|.. .|.+--..++.|..++++++...
T Consensus 74 ~GG~vA~e----vA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 74 LGGAVAFE----VAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cccHHHHH----HHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999 66654444447888999988766
No 146
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.94 E-value=9.4e-09 Score=86.16 Aligned_cols=118 Identities=20% Similarity=0.264 Sum_probs=77.6
Q ss_pred CceEEEEECCCCCChhhH-HHHHHHHHhCCC--eEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEE
Q 016589 122 LKGILIIIHGLNEHSGRY-AQFARQLTSCNF--GVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCF 198 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~-~~~~~~L~~~G~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~ 198 (386)
.+.++||+||+..+...- ...++.....++ .++.+.||..|.-..-.....+......++..+++.+....+..+|+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 467999999999876553 222222222233 79999999887522111111244556778888888888776677899
Q ss_pred EEEechhhHHHHhhhhhHhhcCC--ccccceeEEEEcCccccc
Q 016589 199 LFGHSTGGAVVLKRTFVQAASYP--HIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 199 lvGhS~Gg~~a~~~~~~~a~~~p--~~~~~v~~lvl~~p~~~~ 239 (386)
+++||||+.+.+.++-.+....+ +...++..+++++|-.+.
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999983332223332 223378889999987654
No 147
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.90 E-value=3.7e-07 Score=83.09 Aligned_cols=121 Identities=13% Similarity=0.098 Sum_probs=73.4
Q ss_pred CceEEEEEecCCC--CCCceEEEEECCCCCCh-hhHHHHHHHHHhCC----CeEEEeCCCCCCCCCCCCCCCCChHHHHH
Q 016589 107 RNALFCRSWIPVS--GELKGILIIIHGLNEHS-GRYAQFARQLTSCN----FGVYAMDWIGHGGSDGLHGYVPSLDHVVA 179 (386)
Q Consensus 107 g~~l~~~~~~p~~--~~~~p~vv~lHG~~~~~-~~~~~~~~~L~~~G----~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 179 (386)
|.+..+.+|.|+. .++.|+|+++||-.... ......+..|.+.| ..++.+|..+. ..+.... .....+.+
T Consensus 191 g~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~--~~R~~el-~~~~~f~~ 267 (411)
T PRK10439 191 GNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDT--THRSQEL-PCNADFWL 267 (411)
T ss_pred CCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCc--ccccccC-CchHHHHH
Confidence 5566778888764 25679999999954211 11234455666555 34677775321 1111111 11122222
Q ss_pred HH-HHHHHHHHHhC----CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 180 DT-GAFLEKIKLEN----PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 180 d~-~~~l~~l~~~~----~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
.+ .+++.++..++ +.++.+|+|+||||..|+. ++.++|+ .+.+++..+|.+
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~----~al~~Pd---~Fg~v~s~Sgs~ 323 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALY----AGLHWPE---RFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHH----HHHhCcc---cccEEEEeccce
Confidence 22 23334443332 2346899999999999999 9999999 899999999864
No 148
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.85 E-value=1.7e-08 Score=91.82 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=79.5
Q ss_pred CChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhh
Q 016589 134 EHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRT 213 (386)
Q Consensus 134 ~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~ 213 (386)
.....|..+++.|.+.||.+ ..|++|+|.+.+.. ...++..+++.++++.+....+..+++++||||||.++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~-- 178 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKC-- 178 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHH--
Confidence 45578999999999999866 89999999876542 1456778899999998887777779999999999999999
Q ss_pred hhHhhcCCcc-ccceeEEEEcCcccccC
Q 016589 214 FVQAASYPHI-EAMLEGIVLSAPALRVE 240 (386)
Q Consensus 214 ~~~a~~~p~~-~~~v~~lvl~~p~~~~~ 240 (386)
++..+|+. ...|+.+|+++++....
T Consensus 179 --fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 179 --FMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred --HHHHCCHhHHhHhccEEEECCCCCCC
Confidence 88888863 23578888888765543
No 149
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.84 E-value=1.6e-07 Score=84.15 Aligned_cols=87 Identities=23% Similarity=0.373 Sum_probs=67.2
Q ss_pred HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCC-CEEEEEechhhHHHHhhhhhHhhc
Q 016589 141 QFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTV-PCFLFGHSTGGAVVLKRTFVQAAS 219 (386)
Q Consensus 141 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~-~i~lvGhS~Gg~~a~~~~~~~a~~ 219 (386)
.+...| +.|+.|+.+.+. ..+.++. ++.+...-...+++.+....+.. +.+++|.|.||..++. +|+.
T Consensus 92 evG~AL-~~GHPvYFV~F~----p~P~pgQ--Tl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~m----lAA~ 160 (581)
T PF11339_consen 92 EVGVAL-RAGHPVYFVGFF----PEPEPGQ--TLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMM----LAAL 160 (581)
T ss_pred HHHHHH-HcCCCeEEEEec----CCCCCCC--cHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHH----HHhc
Confidence 344555 569999988875 2222333 88888888889999998887654 8999999999999999 9999
Q ss_pred CCccccceeEEEEcCcccccCC
Q 016589 220 YPHIEAMLEGIVLSAPALRVEP 241 (386)
Q Consensus 220 ~p~~~~~v~~lvl~~p~~~~~~ 241 (386)
+|+ .+.-+|+.+.+.+...
T Consensus 161 ~Pd---~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 161 RPD---LVGPLVLAGAPLSYWA 179 (581)
T ss_pred CcC---ccCceeecCCCccccc
Confidence 999 6777888776665543
No 150
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.83 E-value=2.4e-09 Score=87.78 Aligned_cols=86 Identities=19% Similarity=0.324 Sum_probs=56.5
Q ss_pred eEEEEECCCCC-ChhhHHHHHHHHHhCCCe---EEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEE
Q 016589 124 GILIIIHGLNE-HSGRYAQFARQLTSCNFG---VYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFL 199 (386)
Q Consensus 124 p~vv~lHG~~~-~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~l 199 (386)
.+|||+||.++ ....|..+++.|.++||. |++++|-........... ....+.+..+.++|+.+....+. +|-|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 37999999998 556799999999999999 899998543322111100 01234457899999998877777 9999
Q ss_pred EEechhhHHHHh
Q 016589 200 FGHSTGGAVVLK 211 (386)
Q Consensus 200 vGhS~Gg~~a~~ 211 (386)
|||||||.++-.
T Consensus 80 VgHS~G~~iaR~ 91 (219)
T PF01674_consen 80 VGHSMGGTIARY 91 (219)
T ss_dssp EEETCHHHHHHH
T ss_pred EEcCCcCHHHHH
Confidence 999999999888
No 151
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.82 E-value=1.1e-07 Score=86.53 Aligned_cols=240 Identities=15% Similarity=0.069 Sum_probs=152.6
Q ss_pred cccceeEeccCCceEEEEEec-CCCCCCceEEEEECCCCCCh--hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCC---CC
Q 016589 96 RWSTSLFFGVKRNALFCRSWI-PVSGELKGILIIIHGLNEHS--GRYAQFARQLTSCNFGVYAMDWIGHGGSDGL---HG 169 (386)
Q Consensus 96 ~~~~~~~~~~~g~~l~~~~~~-p~~~~~~p~vv~lHG~~~~~--~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~---~~ 169 (386)
..+....++.||.+|+|.+.. ....++.|++|+--|.-.-+ -.|......+.++|...+..+.||=|+-... .+
T Consensus 393 ~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa 472 (648)
T COG1505 393 EVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAG 472 (648)
T ss_pred eEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHH
Confidence 355667788999999999886 11123578887776643322 2355555777799999999999998765321 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhh
Q 016589 170 YVPSLDHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVG 247 (386)
Q Consensus 170 ~~~~~~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~ 247 (386)
...+-+...+|..++.+.|..+. ..+++.+.|-|-||.+.-. ...++|+ .+.++|+--|..++-..+.+..
T Consensus 473 ~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~----alTQrPe---lfgA~v~evPllDMlRYh~l~a 545 (648)
T COG1505 473 MKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGA----ALTQRPE---LFGAAVCEVPLLDMLRYHLLTA 545 (648)
T ss_pred hhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEe----eeccChh---hhCceeeccchhhhhhhccccc
Confidence 11244556788999998887765 2346899999999999877 7788999 7888888788776643221100
Q ss_pred hHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhc-CCCCccCCcchhHHHHHHHHHHHHHhhcc--CCCccEEEEee
Q 016589 248 AVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYS-DPLVYTGPIRVRTGHEILRLSSYLKRNFK--SVSVPFFVLHG 324 (386)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~P~lii~G 324 (386)
...+....-...+|++...... .| ..+++ ..--|+||-.+
T Consensus 546 ---------------G~sW~~EYG~Pd~P~d~~~l~~YSP----------------------y~nl~~g~kYP~~LITTs 588 (648)
T COG1505 546 ---------------GSSWIAEYGNPDDPEDRAFLLAYSP----------------------YHNLKPGQKYPPTLITTS 588 (648)
T ss_pred ---------------chhhHhhcCCCCCHHHHHHHHhcCc----------------------hhcCCccccCCCeEEEcc
Confidence 0000000111222332221111 11 12222 22358999999
Q ss_pred CCCCccChHHHHHHHHHhhcCCCcEEEcC--CCCCcccCCccHH--HHHHHHHHHHhhhh
Q 016589 325 TGDKVTDPLASQDLYNEAASRFKDIKLYE--GLLHDLLFELERD--EVAQDIIVWLEKKL 380 (386)
Q Consensus 325 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~--~~gH~~~~~~~~~--~~~~~i~~fl~~~~ 380 (386)
.+|.-|.|.++++++.++...+..+.+++ ++||..--. ..+ .-...+..||.+.+
T Consensus 589 ~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~-~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 589 LHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAP-TAEIARELADLLAFLLRTL 647 (648)
T ss_pred cccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCC-hHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999987656665554 689976554 222 33445667777654
No 152
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.80 E-value=1.3e-07 Score=78.63 Aligned_cols=98 Identities=23% Similarity=0.239 Sum_probs=66.2
Q ss_pred EECCCC--CChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechh
Q 016589 128 IIHGLN--EHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTG 205 (386)
Q Consensus 128 ~lHG~~--~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~G 205 (386)
++|+.+ ++...|..+...|.. .+.|+.+|++|++.+.... .+.+..++++...+. ...+..+++++|||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~---~~~~~~~~~l~g~s~G 74 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVL---RAAGGRPFVLVGHSSG 74 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHH---HhcCCCCeEEEEECHH
Confidence 445543 566779999999965 5999999999998654332 255555555444443 2233457999999999
Q ss_pred hHHHHhhhhhHhhcCCccccceeEEEEcCcc
Q 016589 206 GAVVLKRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 206 g~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
|.++.. .+....+....+.+++++++.
T Consensus 75 g~~a~~----~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 75 GLLAHA----VAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHH----HHHHHHhCCCCCcEEEEEccC
Confidence 999988 665433222268888877654
No 153
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.78 E-value=8.2e-07 Score=78.05 Aligned_cols=112 Identities=17% Similarity=0.214 Sum_probs=74.9
Q ss_pred CCceEEEEECCCCCChhhH-------HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 016589 121 ELKGILIIIHGLNEHSGRY-------AQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENP 193 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~-------~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 193 (386)
+..|+||++||+|-..... ..+...| + ...++++||.-... ...+ ..+..+..++.+..+++....+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~--~~~~--~~yPtQL~qlv~~Y~~Lv~~~G 193 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSS--DEHG--HKYPTQLRQLVATYDYLVESEG 193 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEecccccc--ccCC--CcCchHHHHHHHHHHHHHhccC
Confidence 4569999999987533322 2233334 3 46899999975430 1112 2556678888889999886666
Q ss_pred CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccC
Q 016589 194 TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 194 ~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~ 240 (386)
..+|+++|.|.||.+++.++- +. +.+......+++|+++|+....
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~Lq-yL-~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQ-YL-KKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred CCeEEEEecCccHHHHHHHHH-HH-hhcCCCCCCceeEEECCCcCCc
Confidence 778999999999999987222 22 2211112467899999998775
No 154
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.76 E-value=2.5e-07 Score=83.91 Aligned_cols=183 Identities=16% Similarity=0.209 Sum_probs=117.3
Q ss_pred CCceEEEEECCCC-C--ChhhHHHHHHHHHhCC--CeEEEeCCCC-CCCCCCCCCCCCChHHHHHHHHHHHHHH----HH
Q 016589 121 ELKGILIIIHGLN-E--HSGRYAQFARQLTSCN--FGVYAMDWIG-HGGSDGLHGYVPSLDHVVADTGAFLEKI----KL 190 (386)
Q Consensus 121 ~~~p~vv~lHG~~-~--~~~~~~~~~~~L~~~G--~~vi~~D~~G-~G~S~~~~~~~~~~~~~~~d~~~~l~~l----~~ 190 (386)
...|.++++||.+ . .++.+..+-+.|.-.| ..|-.+|++. .|. .++...++-+..+.++. ..
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~g 245 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEITG 245 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhhc
Confidence 3468999999987 1 1222222223332222 5567777762 221 15566666666666633 34
Q ss_pred hCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccccCCCCCCC
Q 016589 191 ENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQFKGANKRGV 270 (386)
Q Consensus 191 ~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (386)
+++..+|+|+|.|||+.++.+ ....+.+. .|+++|+++=.+........
T Consensus 246 efpha~IiLvGrsmGAlVach----VSpsnsdv--~V~~vVCigypl~~vdgprg------------------------- 294 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACH----VSPSNSDV--EVDAVVCIGYPLDTVDGPRG------------------------- 294 (784)
T ss_pred cCCCCceEEEecccCceeeEE----eccccCCc--eEEEEEEecccccCCCcccC-------------------------
Confidence 456778999999999988888 66555542 48888887744332211000
Q ss_pred CCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEE
Q 016589 271 PVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIK 350 (386)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~ 350 (386)
.-.+.+-.++.|+||+.|.+|..++++..+++.+++.. ..+++
T Consensus 295 ------------------------------------irDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elh 337 (784)
T KOG3253|consen 295 ------------------------------------IRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELH 337 (784)
T ss_pred ------------------------------------CcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEE
Confidence 00234455788999999999999999999999999985 47899
Q ss_pred EcCCCCCcccCCc--------cHHHHHHHHHHHHhhh
Q 016589 351 LYEGLLHDLLFEL--------ERDEVAQDIIVWLEKK 379 (386)
Q Consensus 351 ~~~~~gH~~~~~~--------~~~~~~~~i~~fl~~~ 379 (386)
++.+++|.+-... ...++...+.+||.+.
T Consensus 338 VI~~adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 338 VIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred EecCCCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 9999999865431 1445555555555443
No 155
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.74 E-value=2.8e-08 Score=83.94 Aligned_cols=128 Identities=20% Similarity=0.211 Sum_probs=83.5
Q ss_pred ceeEeccCCceEEEEEec--CC-CCCCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChH
Q 016589 99 TSLFFGVKRNALFCRSWI--PV-SGELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLD 175 (386)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~--p~-~~~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 175 (386)
...+.+.||.+|..-... |. .+.+...|||+-|..+-.+. .+...-++.||.|+.+++||+++|.+.+-...+..
T Consensus 216 R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~n 293 (517)
T KOG1553|consen 216 RLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLN 293 (517)
T ss_pred EEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchH
Confidence 445667777776543332 22 23456789999987654332 11222236699999999999999988654332322
Q ss_pred HHHHHHH-HHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 176 HVVADTG-AFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 176 ~~~~d~~-~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
. ++.+. -+|+.++ ++.+.|++.|+|.||..++. +|..+|+ |+++|+-+.+-+.
T Consensus 294 A-~DaVvQfAI~~Lg--f~~edIilygWSIGGF~~~w----aAs~YPd----VkavvLDAtFDDl 347 (517)
T KOG1553|consen 294 A-ADAVVQFAIQVLG--FRQEDIILYGWSIGGFPVAW----AASNYPD----VKAVVLDATFDDL 347 (517)
T ss_pred H-HHHHHHHHHHHcC--CCccceEEEEeecCCchHHH----HhhcCCC----ceEEEeecchhhh
Confidence 2 22222 2233332 34456999999999999999 8999998 9999998876543
No 156
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.70 E-value=1.3e-06 Score=71.09 Aligned_cols=208 Identities=19% Similarity=0.133 Sum_probs=125.7
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCC-----CeEEEeCCCCC----CCCCC----C------CCCCCChHHHHHHHHHH
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCN-----FGVYAMDWIGH----GGSDG----L------HGYVPSLDHVVADTGAF 184 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G-----~~vi~~D~~G~----G~S~~----~------~~~~~~~~~~~~d~~~~ 184 (386)
-+.||+||.+++..+...++.+|...+ --++.+|--|- |.-+. | .....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 368999999999999999999998663 23566665552 11111 1 11223567778899999
Q ss_pred HHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCcc--ccceeEEEEcCcccccCCCCchhhhHhhhhhhhcCCccc
Q 016589 185 LEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHI--EAMLEGIVLSAPALRVEPAHPIVGAVAPLFSLVVPKYQF 262 (386)
Q Consensus 185 l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~--~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (386)
+.+|+.++.-.++-++||||||.-... |+..+..- ...++.+|.+++.+......+- ...
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~----Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~d--------------e~v 187 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTY----YMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPD--------------ETV 187 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHH----HHHHhcCCCCCcchhheEEecccccccccCCC--------------cch
Confidence 999999998888999999999999888 77765321 1147888888776552110000 000
Q ss_pred cCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCC--CccEEEEeeCCC------CccChHH
Q 016589 263 KGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSV--SVPFFVLHGTGD------KVTDPLA 334 (386)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~lii~G~~D------~~v~~~~ 334 (386)
...... .+ ........+ ........+ +.-+|.|.|+-| -.||...
T Consensus 188 ~~v~~~----------------~~-----~~~~t~y~~------y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~as 240 (288)
T COG4814 188 TDVLKD----------------GP-----GLIKTPYYD------YIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWAS 240 (288)
T ss_pred heeecc----------------Cc-----cccCcHHHH------HHHhcceeCCCCcEEEEEecccccCCcCCCceechH
Confidence 000000 00 000000001 112222222 567899999765 4667777
Q ss_pred HHHHHHHhhcCCCcEE--Ec--CCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 335 SQDLYNEAASRFKDIK--LY--EGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 335 ~~~~~~~~~~~~~~~~--~~--~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
+...+..+.+....+. ++ +++.|.-+.| ...+...+.+||-+
T Consensus 241 sls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhe--n~~v~~yv~~FLw~ 286 (288)
T COG4814 241 SLSIYHLFKKNGKSYIESLYKGKDARHSKLHE--NPTVAKYVKNFLWE 286 (288)
T ss_pred hHHHHHHhccCcceeEEEeeeCCcchhhccCC--ChhHHHHHHHHhhc
Confidence 7777777765434333 34 4578876655 56678888888754
No 157
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.65 E-value=1e-06 Score=70.01 Aligned_cols=105 Identities=24% Similarity=0.274 Sum_probs=78.8
Q ss_pred ceEEEEECCCCCChhh---HHHHHHHHHhCCCeEEEeCCC----CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 016589 123 KGILIIIHGLNEHSGR---YAQFARQLTSCNFGVYAMDWI----GHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTV 195 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~---~~~~~~~L~~~G~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 195 (386)
+-.|||+-|++..... -..+...|-+.+|.++-+-++ |+|.+ ++.+.++|+..+++++.......
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--------slk~D~edl~~l~~Hi~~~~fSt 107 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--------SLKDDVEDLKCLLEHIQLCGFST 107 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc--------cccccHHHHHHHHHHhhccCccc
Confidence 4579999998875443 467888888899999998876 44433 67777999999999987765455
Q ss_pred CEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccC
Q 016589 196 PCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 196 ~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~ 240 (386)
.++++|||.|+.-.+. |. .+......+.+.|+.+|..+..
T Consensus 108 ~vVL~GhSTGcQdi~y----Yl-Tnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMY----YL-TNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHH----HH-HhccchHHHHHHHHhCccchhh
Confidence 7999999999999888 54 2222122677788888887654
No 158
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.62 E-value=1e-06 Score=77.47 Aligned_cols=246 Identities=22% Similarity=0.211 Sum_probs=126.5
Q ss_pred ceEEEEEecCCCC---CCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC-------CCCCChH--
Q 016589 108 NALFCRSWIPVSG---ELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLH-------GYVPSLD-- 175 (386)
Q Consensus 108 ~~l~~~~~~p~~~---~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-------~~~~~~~-- 175 (386)
..+....+.|... ...|.+++.||+++...........++..++.++..+....|.+.... .....+.
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 110 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAA 110 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchh
Confidence 4455666666554 467899999999998887666788888888888887753322221110 0000000
Q ss_pred HH---HHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchh----hh
Q 016589 176 HV---VADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIV----GA 248 (386)
Q Consensus 176 ~~---~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~----~~ 248 (386)
.. ..++...-...... ...+....|++.|+..+.. ++...+... ....++............... ..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~----~~~~~~~~~-~~~~~~~~g~s~g~~~~~~~~~~~~~~ 184 (299)
T COG1073 111 VLLLLSEGVLDKDYRLLGA-SLGPRILAGLSLGGPSAGA----LLAWGPTRL-DASRIVVWGESLGGALALLLLGANPEL 184 (299)
T ss_pred heeeeccccccHHHHHHhh-hcCcceEEEEEeeccchHH----HhhcchhHH-HhhcccceeeccCceeeccccccchHH
Confidence 00 00111000011111 1136889999999998888 666665210 111222222211111100000 00
Q ss_pred HhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCC-ccEEEEeeCCC
Q 016589 249 VAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVS-VPFFVLHGTGD 327 (386)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~lii~G~~D 327 (386)
.......+.....+................ ... + ...+....+.++. +|+|+++|.+|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------------~-~~~d~~~~~~~i~~~P~l~~~G~~D 243 (299)
T COG1073 185 ARELIDYLITPGGFAPLPAPEAPLDTLPLR-AVL-------------------L-LLLDPFDDAEKISPRPVLLVHGERD 243 (299)
T ss_pred HHhhhhhhccCCCCCCCCcccccccccccc-hhh-------------------h-ccCcchhhHhhcCCcceEEEecCCC
Confidence 111111111111111100000000000000 000 0 0001123334444 79999999999
Q ss_pred CccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccH--HHHHHHHHHHHhhhh
Q 016589 328 KVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELER--DEVAQDIIVWLEKKL 380 (386)
Q Consensus 328 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~--~~~~~~i~~fl~~~~ 380 (386)
..+|......+++.......+..++++++|.......+ ++..+.+.+|+.+++
T Consensus 244 ~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 244 EVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 99999999999998876456788889999987754233 378999999998865
No 159
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.61 E-value=3.8e-08 Score=86.62 Aligned_cols=110 Identities=23% Similarity=0.283 Sum_probs=64.6
Q ss_pred CCceEEEEECCCCCCh--hhH-HHHHHHHHh---CCCeEEEeCCCCCCCCCCCCCCC---CChHHHHHHHHHHHHHHHHh
Q 016589 121 ELKGILIIIHGLNEHS--GRY-AQFARQLTS---CNFGVYAMDWIGHGGSDGLHGYV---PSLDHVVADTGAFLEKIKLE 191 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~--~~~-~~~~~~L~~---~G~~vi~~D~~G~G~S~~~~~~~---~~~~~~~~d~~~~l~~l~~~ 191 (386)
..+|++|++|||.++. ..| ..+.+.+.+ .+++|+++||...- + . .|. .........+..+|+.|...
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a-~-~--~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGA-S-N--NYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHH-S-S---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhc-c-c--cccchhhhHHHHHHHHHHHHHHHHhh
Confidence 4689999999999887 234 455665544 48999999996321 1 1 111 02333455666777777632
Q ss_pred --CCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 192 --NPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 192 --~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
.+.+++++||||+||++|-. ++..... ..+|..+..++|+...
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~----aG~~~~~-~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGF----AGKYLKG-GGKIGRITGLDPAGPL 189 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHH----HHHHTTT----SSEEEEES-B-TT
T ss_pred cCCChhHEEEEeeccchhhhhh----hhhhccC-cceeeEEEecCccccc
Confidence 24457999999999999998 4444443 3368888888877543
No 160
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.59 E-value=4.4e-07 Score=77.99 Aligned_cols=120 Identities=18% Similarity=0.281 Sum_probs=84.3
Q ss_pred CCceEEEEECCCCCChhh-HHHHHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCE
Q 016589 121 ELKGILIIIHGLNEHSGR-YAQFARQLTSC--NFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPC 197 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~-~~~~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i 197 (386)
..+.++||+||++.+-.. -...++-..+. ....+.+.||..|.--.-.-...+.+....++..+|+.|..+.+..+|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 346799999999876543 22333333333 356788999966642211111124555678899999999998888899
Q ss_pred EEEEechhhHHHHhhhhhHhhcCCc-cccceeEEEEcCcccccC
Q 016589 198 FLFGHSTGGAVVLKRTFVQAASYPH-IEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 198 ~lvGhS~Gg~~a~~~~~~~a~~~p~-~~~~v~~lvl~~p~~~~~ 240 (386)
+|++||||..+++..+=+++.+..+ +..+++-+|+.+|-.+..
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 9999999999999855566666665 556788899999877653
No 161
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.58 E-value=4.5e-06 Score=77.30 Aligned_cols=141 Identities=19% Similarity=0.189 Sum_probs=90.7
Q ss_pred ceeEecc--CCceEEEEEecCCC-CCCceEEEEECCCCCChhhHHHHHH-------------------HHHhCCCeEEEe
Q 016589 99 TSLFFGV--KRNALFCRSWIPVS-GELKGILIIIHGLNEHSGRYAQFAR-------------------QLTSCNFGVYAM 156 (386)
Q Consensus 99 ~~~~~~~--~g~~l~~~~~~p~~-~~~~p~vv~lHG~~~~~~~~~~~~~-------------------~L~~~G~~vi~~ 156 (386)
..++... .+..++|..+.... .+.+|+||++.|.+|++..+..+.+ .+.+ -.+++-+
T Consensus 13 sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~i 91 (415)
T PF00450_consen 13 SGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFI 91 (415)
T ss_dssp EEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE
T ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceEEE
Confidence 3444434 57889999887654 3678999999999998877643321 1112 2689999
Q ss_pred CCC-CCCCCCCCCC--CCCChHHHHHHHHHHHHHHHHhCC---CCCEEEEEechhhHHHHhhhhhHhhcCCcc---ccce
Q 016589 157 DWI-GHGGSDGLHG--YVPSLDHVVADTGAFLEKIKLENP---TVPCFLFGHSTGGAVVLKRTFVQAASYPHI---EAML 227 (386)
Q Consensus 157 D~~-G~G~S~~~~~--~~~~~~~~~~d~~~~l~~l~~~~~---~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~---~~~v 227 (386)
|.| |.|.|..... +..+.++.++|+..+|+..-..++ ..+++|.|.|+||..+-.++..+....... .-.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 966 8999865443 334778889999999988766653 448999999999998766333233333211 2369
Q ss_pred eEEEEcCcccccC
Q 016589 228 EGIVLSAPALRVE 240 (386)
Q Consensus 228 ~~lvl~~p~~~~~ 240 (386)
+|+++.+|..+..
T Consensus 172 kGi~IGng~~dp~ 184 (415)
T PF00450_consen 172 KGIAIGNGWIDPR 184 (415)
T ss_dssp EEEEEESE-SBHH
T ss_pred ccceecCcccccc
Confidence 9999999987653
No 162
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.58 E-value=2e-07 Score=80.02 Aligned_cols=127 Identities=13% Similarity=0.052 Sum_probs=76.5
Q ss_pred CceEEEEEecCCC---CCCceEEEEECCCCCChhhH--HHHHHHHHhCC----CeEEEeCCCCCCCCCC----------C
Q 016589 107 RNALFCRSWIPVS---GELKGILIIIHGLNEHSGRY--AQFARQLTSCN----FGVYAMDWIGHGGSDG----------L 167 (386)
Q Consensus 107 g~~l~~~~~~p~~---~~~~p~vv~lHG~~~~~~~~--~~~~~~L~~~G----~~vi~~D~~G~G~S~~----------~ 167 (386)
|....+.+|.|++ .++.|+|+++||.......+ ....+.+.+.| ..+++++..+.+.... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 4456677777765 36789999999973222222 23344444432 4567777655541110 0
Q ss_pred CCCCCChHHHHHHH-HHHHHHHHHhCCC--CCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccC
Q 016589 168 HGYVPSLDHVVADT-GAFLEKIKLENPT--VPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 168 ~~~~~~~~~~~~d~-~~~l~~l~~~~~~--~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~ 240 (386)
.........+.+.+ .+++.++..+++. .+..++|+||||..|+. ++.++|+ .+.+++.++|.....
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~----~~l~~Pd---~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALY----LALRHPD---LFGAVIAFSGALDPS 153 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHH----HHHHSTT---TESEEEEESEESETT
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHH----HHHhCcc---ccccccccCcccccc
Confidence 01111122222222 2445555555421 12899999999999999 9999999 899999999886654
No 163
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.52 E-value=6.6e-06 Score=76.22 Aligned_cols=223 Identities=14% Similarity=0.024 Sum_probs=129.0
Q ss_pred eeEeccCCceEEEEEecCC---CCCCceEEEEECCCCCChh--hHHHHHHHHHhCCCeEEEeCCCCCCCCCCC---CCCC
Q 016589 100 SLFFGVKRNALFCRSWIPV---SGELKGILIIIHGLNEHSG--RYAQFARQLTSCNFGVYAMDWIGHGGSDGL---HGYV 171 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~---~~~~~p~vv~lHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~---~~~~ 171 (386)
......||.++...+.... ...+.|++|+.-|.-+... .|....-.|.++|+.-...--||=|.-... .+..
T Consensus 422 iwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~ 501 (682)
T COG1770 422 IWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKL 501 (682)
T ss_pred EEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhh
Confidence 3344478988876554332 2356789999888554332 255444456689988777777886654321 1111
Q ss_pred CChHHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhH
Q 016589 172 PSLDHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAV 249 (386)
Q Consensus 172 ~~~~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~ 249 (386)
..-.....|..++.++|..+. ...+++++|-|.||++.-. .+...|+ .+.++|+-.|+++.-..
T Consensus 502 l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGa----v~N~~P~---lf~~iiA~VPFVDvltT------- 567 (682)
T COG1770 502 LNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGA----VANMAPD---LFAGIIAQVPFVDVLTT------- 567 (682)
T ss_pred hhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHH----HHhhChh---hhhheeecCCccchhhh-------
Confidence 122233567777777776554 2347999999999999998 8999999 89999999998765321
Q ss_pred hhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhcc-CCCccEEEEeeCCCC
Q 016589 250 APLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFK-SVSVPFFVLHGTGDK 328 (386)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~P~lii~G~~D~ 328 (386)
.+.+...........+-...+++.......- . ..+++. +--.|+|++.|..|+
T Consensus 568 -----MlD~slPLT~~E~~EWGNP~d~e~y~yikSY--------------------S-PYdNV~a~~YP~ilv~~Gl~D~ 621 (682)
T COG1770 568 -----MLDPSLPLTVTEWDEWGNPLDPEYYDYIKSY--------------------S-PYDNVEAQPYPAILVTTGLNDP 621 (682)
T ss_pred -----hcCCCCCCCccchhhhCCcCCHHHHHHHhhc--------------------C-chhccccCCCCceEEEccccCC
Confidence 0111111111110001111122211111000 0 012222 234589999999999
Q ss_pred ccChHHHHHHHHHhhcC--CCc---EEEcCCCCCcccCC
Q 016589 329 VTDPLASQDLYNEAASR--FKD---IKLYEGLLHDLLFE 362 (386)
Q Consensus 329 ~v~~~~~~~~~~~~~~~--~~~---~~~~~~~gH~~~~~ 362 (386)
.|......++..++... +.. +.+=-++||...-.
T Consensus 622 rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~Sg 660 (682)
T COG1770 622 RVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASG 660 (682)
T ss_pred ccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCC
Confidence 99988888887777541 121 22224789976554
No 164
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.52 E-value=3.4e-07 Score=82.11 Aligned_cols=125 Identities=18% Similarity=0.173 Sum_probs=82.2
Q ss_pred eEEEEEecCC-CCCCceEEEEECCCC---CChhhHHHHHHHHHhCC-CeEEEeCCCC--CCCCCCCC---CCCCChHHHH
Q 016589 109 ALFCRSWIPV-SGELKGILIIIHGLN---EHSGRYAQFARQLTSCN-FGVYAMDWIG--HGGSDGLH---GYVPSLDHVV 178 (386)
Q Consensus 109 ~l~~~~~~p~-~~~~~p~vv~lHG~~---~~~~~~~~~~~~L~~~G-~~vi~~D~~G--~G~S~~~~---~~~~~~~~~~ 178 (386)
-|+..+|.|+ ..++.|++|+|||.+ ++......--..|+++| +.|+.+|||- .|.-+.+. .....-.--.
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl 158 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGL 158 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccH
Confidence 4677888888 556789999999965 33333223356788887 9999999993 22211110 0000111246
Q ss_pred HHHHHHHHHHHHhC-----CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccc
Q 016589 179 ADTGAFLEKIKLEN-----PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 179 ~d~~~~l~~l~~~~-----~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
.|+..++++++.+- +..+|.|+|+|.||+.++. ....|.....+..+|+.|+...
T Consensus 159 ~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~-----Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 159 LDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILT-----LLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHH-----hhcCccchHHHHHHHHhCCCCC
Confidence 77778888876542 3447999999999999988 4445764446777788887765
No 165
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.51 E-value=4.1e-06 Score=69.69 Aligned_cols=87 Identities=13% Similarity=0.144 Sum_probs=50.9
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHh--CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCC--CCEE
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTS--CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPT--VPCF 198 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~--~~i~ 198 (386)
.-.|||+||+.++...|..+...+.. ..+.-..+.+.++...... . ..+++...+.+.+-|......... .++.
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~-T-~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK-T-FDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc-c-chhhHHHHHHHHHHHHHhccccccccccce
Confidence 45899999999999999888877765 1222112222222111111 1 124555555544443333322222 4799
Q ss_pred EEEechhhHHHHh
Q 016589 199 LFGHSTGGAVVLK 211 (386)
Q Consensus 199 lvGhS~Gg~~a~~ 211 (386)
+||||+||.++-.
T Consensus 82 fIgHSLGGli~r~ 94 (217)
T PF05057_consen 82 FIGHSLGGLIARY 94 (217)
T ss_pred EEEecccHHHHHH
Confidence 9999999999876
No 166
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.46 E-value=4.7e-06 Score=70.82 Aligned_cols=64 Identities=13% Similarity=0.053 Sum_probs=54.0
Q ss_pred cCCCccEEEEeeCCCCccChHHHHHHHHHhhcCC--CcEEEcCCCCCcccCCccHHHHHHHHHHHH
Q 016589 313 KSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRF--KDIKLYEGLLHDLLFELERDEVAQDIIVWL 376 (386)
Q Consensus 313 ~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 376 (386)
...++|.++++++.|.+++.+..++..+.....+ ++...++++.|..+...++++.++.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3456899999999999999999998888776544 456678999999998889999999999874
No 167
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.46 E-value=7e-07 Score=84.57 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=75.4
Q ss_pred eEEEEEecCCC---CCCceEEEEECCCCCC---hhhHHHHHHHHHhC--CCeEEEeCCC-C---CCCCCCCCCCCCChHH
Q 016589 109 ALFCRSWIPVS---GELKGILIIIHGLNEH---SGRYAQFARQLTSC--NFGVYAMDWI-G---HGGSDGLHGYVPSLDH 176 (386)
Q Consensus 109 ~l~~~~~~p~~---~~~~p~vv~lHG~~~~---~~~~~~~~~~L~~~--G~~vi~~D~~-G---~G~S~~~~~~~~~~~~ 176 (386)
-++..+|.|.. .++.|+||++||.+.. ...+ ....|+.. |+.|+.++|| | +..+... ......
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~ 152 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNY 152 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcch
Confidence 56677777754 3567999999996532 2222 23344433 3999999999 3 2222211 112233
Q ss_pred HHHHHHHHHHHHHHhC-----CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccc
Q 016589 177 VVADTGAFLEKIKLEN-----PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~-----~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
-..|...++++++..- +..+|.++|+|.||.++.. ++. .|.....++++|+.++...
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~----~~~-~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSL----LLL-SPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhh----Hhh-CcchhHHHHHHhhhcCCcc
Confidence 4677888888876541 3458999999999999988 443 3332226788888776543
No 168
>PLN02606 palmitoyl-protein thioesterase
Probab=98.45 E-value=2.1e-05 Score=67.03 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=66.8
Q ss_pred EEEEECCCC--CChhhHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEE
Q 016589 125 ILIIIHGLN--EHSGRYAQFARQLTS-CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFG 201 (386)
Q Consensus 125 ~vv~lHG~~--~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvG 201 (386)
+||+.||.+ .+...+..+.+.+.+ .|+-+..+. .|-+. .....-...+.++.+.+.+........ -+.++|
T Consensus 28 PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~~--G~naIG 101 (306)
T PLN02606 28 PFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELSE--GYNIVA 101 (306)
T ss_pred CEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhcC--ceEEEE
Confidence 799999999 445567777777752 366555554 23221 122323556666666666665333322 399999
Q ss_pred echhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 202 HSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 202 hS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
+|.||.++-. ++.+.|+ ...|+.+|.+++..
T Consensus 102 fSQGglflRa----~ierc~~-~p~V~nlISlggph 132 (306)
T PLN02606 102 ESQGNLVARG----LIEFCDN-APPVINYVSLGGPH 132 (306)
T ss_pred EcchhHHHHH----HHHHCCC-CCCcceEEEecCCc
Confidence 9999999988 8888765 12588898887654
No 169
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.45 E-value=1.1e-05 Score=70.32 Aligned_cols=84 Identities=15% Similarity=0.101 Sum_probs=71.1
Q ss_pred CceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEE
Q 016589 122 LKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFG 201 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvG 201 (386)
+.-.-||+.|=|+..+.-+.+.+.|.++|+.|+.+|-.-|-.|.+ +.+..+.|+..++++...+.+..++.++|
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r------tPe~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER------TPEQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC------CHHHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 456778888888877777889999999999999999765555543 77888999999999999888788999999
Q ss_pred echhhHHHHh
Q 016589 202 HSTGGAVVLK 211 (386)
Q Consensus 202 hS~Gg~~a~~ 211 (386)
+|+|+-+.-.
T Consensus 333 ySfGADvlP~ 342 (456)
T COG3946 333 YSFGADVLPF 342 (456)
T ss_pred ecccchhhHH
Confidence 9999988655
No 170
>COG3150 Predicted esterase [General function prediction only]
Probab=98.42 E-value=2.1e-05 Score=59.94 Aligned_cols=90 Identities=16% Similarity=0.169 Sum_probs=58.6
Q ss_pred EEEECCCCCChhhHHHHH--HHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEec
Q 016589 126 LIIIHGLNEHSGRYAQFA--RQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHS 203 (386)
Q Consensus 126 vv~lHG~~~~~~~~~~~~--~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS 203 (386)
||++|||.+|..+..... +.+... . |-.+.+..... .+.....+.+..++...+.+. ..++|-|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~-------~~i~y~~p~l~--h~p~~a~~ele~~i~~~~~~~----p~ivGss 67 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-V-------RDIEYSTPHLP--HDPQQALKELEKAVQELGDES----PLIVGSS 67 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-c-------cceeeecCCCC--CCHHHHHHHHHHHHHHcCCCC----ceEEeec
Confidence 899999999988876533 333322 2 22222222222 266777777777777665443 8999999
Q ss_pred hhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 204 TGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 204 ~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
+||+.|.+ ++.++. ++ .|+++|+..+
T Consensus 68 LGGY~At~----l~~~~G-----ir-av~~NPav~P 93 (191)
T COG3150 68 LGGYYATW----LGFLCG-----IR-AVVFNPAVRP 93 (191)
T ss_pred chHHHHHH----HHHHhC-----Ch-hhhcCCCcCc
Confidence 99999999 777775 33 4566777654
No 171
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=6.6e-06 Score=75.69 Aligned_cols=247 Identities=14% Similarity=0.059 Sum_probs=142.3
Q ss_pred cccceeEeccCCceEEEEEecCCC---CCCceEEEEECCCCCChh--hHHHHHHHHHhCCCeEEEeCCCCCCCCCCC---
Q 016589 96 RWSTSLFFGVKRNALFCRSWIPVS---GELKGILIIIHGLNEHSG--RYAQFARQLTSCNFGVYAMDWIGHGGSDGL--- 167 (386)
Q Consensus 96 ~~~~~~~~~~~g~~l~~~~~~p~~---~~~~p~vv~lHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~--- 167 (386)
..+...+.+.||..+.-.+..... .+++|.+|+.+|.-+-+- .|..-...|.++|+.....|.||=|+-...
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk 519 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHK 519 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhh
Confidence 345667888999988665544322 246899988888544222 244333344578999999999997754321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCch
Q 016589 168 HGYVPSLDHVVADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPI 245 (386)
Q Consensus 168 ~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~ 245 (386)
.+....-.+..+|..+..++|..+. ...+..+.|.|.||.++.. .+.++|+ .+.++|+--|+.+.-.....
T Consensus 520 ~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga----~iN~rPd---LF~avia~VpfmDvL~t~~~ 592 (712)
T KOG2237|consen 520 DGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGA----CINQRPD---LFGAVIAKVPFMDVLNTHKD 592 (712)
T ss_pred ccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHH----HhccCch---HhhhhhhcCcceehhhhhcc
Confidence 2222233445678888888887654 3347999999999999998 8889999 78888888887765321100
Q ss_pred hhhHhhhhhhhcCCccccCCCCCCCCCCCCHHHHHHHhc-CCCCccCCcchhHHHHHHHHHHHHHhhc-cC-CCccEEEE
Q 016589 246 VGAVAPLFSLVVPKYQFKGANKRGVPVSRDPAALLAKYS-DPLVYTGPIRVRTGHEILRLSSYLKRNF-KS-VSVPFFVL 322 (386)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-i~~P~lii 322 (386)
...+.. .....-..+++....... .+... .+.. +. .---+|+.
T Consensus 593 ---------tilplt------~sd~ee~g~p~~~~~~~~i~~y~p-------------------v~~i~~q~~YPS~lvt 638 (712)
T KOG2237|consen 593 ---------TILPLT------TSDYEEWGNPEDFEDLIKISPYSP-------------------VDNIKKQVQYPSMLVT 638 (712)
T ss_pred ---------Cccccc------hhhhcccCChhhhhhhheecccCc-------------------cCCCchhccCcceEEe
Confidence 000000 000001111111111100 00000 0000 01 12358999
Q ss_pred eeCCCCccChHHHHHHHHHhhc---------CCCcEEEcCCCCCcccCCccHHHH--HHHHHHHHhhhhcCCc
Q 016589 323 HGTGDKVTDPLASQDLYNEAAS---------RFKDIKLYEGLLHDLLFELERDEV--AQDIIVWLEKKLGCSI 384 (386)
Q Consensus 323 ~G~~D~~v~~~~~~~~~~~~~~---------~~~~~~~~~~~gH~~~~~~~~~~~--~~~i~~fl~~~~~~~~ 384 (386)
.+.+|.-|.+....++.+++.. ++.-+.+-.++||+.--. ...++ ......|+.+.++...
T Consensus 639 ta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~-~~k~~~E~a~~yaFl~K~~~~~~ 710 (712)
T KOG2237|consen 639 TADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKP-RFKQIEEAAFRYAFLAKMLNSDW 710 (712)
T ss_pred eccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCc-hHHHHHHHHHHHHHHHHHhcCcc
Confidence 9999888888777777666532 123456668999964322 22222 2346778887776543
No 172
>PLN02209 serine carboxypeptidase
Probab=98.28 E-value=0.00074 Score=62.12 Aligned_cols=135 Identities=20% Similarity=0.211 Sum_probs=83.7
Q ss_pred CCceEEEEEecCCCC-CCceEEEEECCCCCChhhHHHHHH----------------HHH------hCCCeEEEeCC-CCC
Q 016589 106 KRNALFCRSWIPVSG-ELKGILIIIHGLNEHSGRYAQFAR----------------QLT------SCNFGVYAMDW-IGH 161 (386)
Q Consensus 106 ~g~~l~~~~~~p~~~-~~~p~vv~lHG~~~~~~~~~~~~~----------------~L~------~~G~~vi~~D~-~G~ 161 (386)
.+..++|..+..... +..|+|+++-|.+|++..+..+.+ .|. .+-.+++-+|. -|.
T Consensus 50 ~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 129 (437)
T PLN02209 50 ENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGS 129 (437)
T ss_pred CCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCC
Confidence 356788877765433 557999999999987766422211 111 11257999995 488
Q ss_pred CCCCCCCC-CCCChHHHHHHHHHHHHHHHHhCC---CCCEEEEEechhhHHHHhhhhhHhhcCC---ccccceeEEEEcC
Q 016589 162 GGSDGLHG-YVPSLDHVVADTGAFLEKIKLENP---TVPCFLFGHSTGGAVVLKRTFVQAASYP---HIEAMLEGIVLSA 234 (386)
Q Consensus 162 G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~---~~~i~lvGhS~Gg~~a~~~~~~~a~~~p---~~~~~v~~lvl~~ 234 (386)
|.|-.... ...+-++.++|+..+++..-...+ ..++++.|.|+||..+-.++..+..... +..-.++|+++.+
T Consensus 130 GfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ign 209 (437)
T PLN02209 130 GFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGN 209 (437)
T ss_pred CccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecC
Confidence 88853321 212333456888888877655543 3579999999999877662221221121 1112688999998
Q ss_pred cccccC
Q 016589 235 PALRVE 240 (386)
Q Consensus 235 p~~~~~ 240 (386)
|..+..
T Consensus 210 g~td~~ 215 (437)
T PLN02209 210 PITHIE 215 (437)
T ss_pred cccChh
Confidence 877643
No 173
>COG0627 Predicted esterase [General function prediction only]
Probab=98.26 E-value=3.2e-05 Score=67.45 Aligned_cols=233 Identities=17% Similarity=0.126 Sum_probs=117.7
Q ss_pred CCceEEEEECCCCCChhh---HHHHHHHHHhCCCeEEEeCCC--------------CCCCCC---CCC---CC-CCChHH
Q 016589 121 ELKGILIIIHGLNEHSGR---YAQFARQLTSCNFGVYAMDWI--------------GHGGSD---GLH---GY-VPSLDH 176 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~---~~~~~~~L~~~G~~vi~~D~~--------------G~G~S~---~~~---~~-~~~~~~ 176 (386)
.+-|+++++||..++... ...+-......|+.++.+|-. |-+.|- ... .. .+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 557899999998877433 234445555668888886432 222110 000 00 023333
Q ss_pred -HHHHHHHHHHHHHHhCCC-CCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCCCCchhhhHhhhhh
Q 016589 177 -VVADTGAFLEKIKLENPT-VPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEPAHPIVGAVAPLFS 254 (386)
Q Consensus 177 -~~~d~~~~l~~l~~~~~~-~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 254 (386)
..+++.+.++........ .+..++||||||.-|+. +|+++|+ +++.+...+|.............+.....
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~----lA~~~pd---~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g 204 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALK----LALKHPD---RFKSASSFSGILSPSSPWGPTLAMGDPWG 204 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhh----hhhhCcc---hhceecccccccccccccccccccccccc
Confidence 344555444332221110 25799999999999999 9999998 89999999988877533222100000000
Q ss_pred hhcCCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHhhccCCCccEEEEeeCCCCccC--h
Q 016589 255 LVVPKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKRNFKSVSVPFFVLHGTGDKVTD--P 332 (386)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~ 332 (386)
.....- .............++......... .. ....... .....++++-+|..|.+.. .
T Consensus 205 ~~~~~~-~~G~~~~~~w~~~D~~~~~~~l~~----------------~~-~~~~~~~-~~~~~~~~~d~g~ad~~~~~~~ 265 (316)
T COG0627 205 GKAFNA-MLGPDSDPAWQENDPLSLIEKLVA----------------NA-NTRIWVY-GGSPPELLIDNGPADFFLAANN 265 (316)
T ss_pred CccHHH-hcCCCccccccccCchhHHHHhhh----------------cc-cccceec-ccCCCccccccccchhhhhhcc
Confidence 000000 000000000011111111110000 00 0000001 1134577778899998775 2
Q ss_pred HHHHHHHHHhhc--CCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhcC
Q 016589 333 LASQDLYNEAAS--RFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLGC 382 (386)
Q Consensus 333 ~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 382 (386)
...+.+.+++.+ .+..+...++.+|.+. ......+....|+...++.
T Consensus 266 ~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~---~w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 266 LSTRAFAEALRAAGIPNGVRDQPGGDHSWY---FWASQLADHLPWLAGALGL 314 (316)
T ss_pred cCHHHHHHHHHhcCCCceeeeCCCCCcCHH---HHHHHHHHHHHHHHHHhcc
Confidence 234555555543 2245666678899654 4667788888888887754
No 174
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.26 E-value=0.0006 Score=60.59 Aligned_cols=126 Identities=17% Similarity=0.212 Sum_probs=80.4
Q ss_pred CCceEEEEEecCCCCCCceEEEEECCCCCChhh--HHHHHHHHHhC-CCeEEEeCCCCCCCCCCCC--------------
Q 016589 106 KRNALFCRSWIPVSGELKGILIIIHGLNEHSGR--YAQFARQLTSC-NFGVYAMDWIGHGGSDGLH-------------- 168 (386)
Q Consensus 106 ~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~--~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~-------------- 168 (386)
...+|.|+.........+..|+++.|+|++... ++.+.+.+|+. +..|+.++|-+.|..+...
T Consensus 18 R~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk 97 (403)
T PF11144_consen 18 RESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILK 97 (403)
T ss_pred ccceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHH
Confidence 345778888655555667899999999998875 56777888765 4455667777766432100
Q ss_pred ------C----CCC---ChHH-------------------------------------------HHHHHHHHHHHHHHhC
Q 016589 169 ------G----YVP---SLDH-------------------------------------------VVADTGAFLEKIKLEN 192 (386)
Q Consensus 169 ------~----~~~---~~~~-------------------------------------------~~~d~~~~l~~l~~~~ 192 (386)
. ... .... .+-|+..++.++....
T Consensus 98 ~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~ 177 (403)
T PF11144_consen 98 KSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIF 177 (403)
T ss_pred HHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 0 000 0111 1224444444444333
Q ss_pred C----CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccc
Q 016589 193 P----TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 193 ~----~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
+ +-|++++|+|.||++|.. .|.-.|. .+++++=.+++..
T Consensus 178 ~~~~~~lp~I~~G~s~G~yla~l----~~k~aP~---~~~~~iDns~~~~ 220 (403)
T PF11144_consen 178 PKNGGGLPKIYIGSSHGGYLAHL----CAKIAPW---LFDGVIDNSSYAL 220 (403)
T ss_pred hcccCCCcEEEEecCcHHHHHHH----HHhhCcc---ceeEEEecCcccc
Confidence 1 248999999999999999 7777898 7888877666543
No 175
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.25 E-value=2.3e-05 Score=72.90 Aligned_cols=110 Identities=24% Similarity=0.311 Sum_probs=72.5
Q ss_pred ceEEEEECCCCCChhh--HHHHHHHHH-hCCCeEEEeCCCCCCCCCCCC------CCCCChHHHHHHHHHHHHHHHHhC-
Q 016589 123 KGILIIIHGLNEHSGR--YAQFARQLT-SCNFGVYAMDWIGHGGSDGLH------GYVPSLDHVVADTGAFLEKIKLEN- 192 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~--~~~~~~~L~-~~G~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~d~~~~l~~l~~~~- 192 (386)
.|++|++-|=+.-... ...+...|+ +.|-.|+++++|-+|.|.+.. -...+.++..+|+..++++++.+.
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 6777777664322211 223455565 337899999999999996431 112388999999999999998654
Q ss_pred --CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 193 --PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 193 --~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
+..|++++|-|+||++|.. +-.++|+ .|.|.+..++++..
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw----~r~kyP~---~~~ga~ASSapv~a 150 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAW----FRLKYPH---LFDGAWASSAPVQA 150 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHH----HHHH-TT---T-SEEEEET--CCH
T ss_pred CCCCCCEEEECCcchhHHHHH----HHhhCCC---eeEEEEeccceeee
Confidence 3458999999999999999 9999999 78888887776543
No 176
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.20 E-value=0.001 Score=60.75 Aligned_cols=134 Identities=16% Similarity=0.096 Sum_probs=85.6
Q ss_pred CCceEEEEEecCCCC-CCceEEEEECCCCCChhhHHHHHHHH------------H------hCCCeEEEeCCC-CCCCCC
Q 016589 106 KRNALFCRSWIPVSG-ELKGILIIIHGLNEHSGRYAQFARQL------------T------SCNFGVYAMDWI-GHGGSD 165 (386)
Q Consensus 106 ~g~~l~~~~~~p~~~-~~~p~vv~lHG~~~~~~~~~~~~~~L------------~------~~G~~vi~~D~~-G~G~S~ 165 (386)
.+..++|+.+..... ..+|+||.+-|.+|.+..- .+..++ . .+-.+++-+|.| |.|.|-
T Consensus 55 ~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSY 133 (454)
T KOG1282|consen 55 EGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSY 133 (454)
T ss_pred CCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccc
Confidence 588999999876543 5689999999999877543 222211 0 011468888887 777775
Q ss_pred CCCC--CCCChHHHHHHHHHHHHHHHHhC---CCCCEEEEEechhhHHHHhhhhhHhhcCC---ccccceeEEEEcCccc
Q 016589 166 GLHG--YVPSLDHVVADTGAFLEKIKLEN---PTVPCFLFGHSTGGAVVLKRTFVQAASYP---HIEAMLEGIVLSAPAL 237 (386)
Q Consensus 166 ~~~~--~~~~~~~~~~d~~~~l~~l~~~~---~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p---~~~~~v~~lvl~~p~~ 237 (386)
.... +..+-+..++|...++...-.+. ..+++++.|.|++|+..-.++-++...+. ...-.++|+++-+|..
T Consensus 134 s~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 134 SNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred cCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 3322 22345566778777777655554 35689999999999776552221333321 1123689999988887
Q ss_pred ccC
Q 016589 238 RVE 240 (386)
Q Consensus 238 ~~~ 240 (386)
+..
T Consensus 214 d~~ 216 (454)
T KOG1282|consen 214 DPE 216 (454)
T ss_pred Ccc
Confidence 654
No 177
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.19 E-value=2e-05 Score=67.20 Aligned_cols=103 Identities=15% Similarity=0.149 Sum_probs=67.3
Q ss_pred eEEEEECCCCCChhh--HHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEE
Q 016589 124 GILIIIHGLNEHSGR--YAQFARQLTS-CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLF 200 (386)
Q Consensus 124 p~vv~lHG~~~~~~~--~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lv 200 (386)
.++|+.||.|.+... ...+.+.+.+ .|..+..+.. |.+ ...++.....+.++.+.+.+........ -+.++
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l~~--G~naI 99 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKELSQ--GYNIV 99 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhhhC--cEEEE
Confidence 478999999976543 4445555533 3666666543 333 2234444666777777776666433322 39999
Q ss_pred EechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 201 GHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 201 GhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
|+|.||.++-. ++.+.|+ ...|+.+|.+++.-
T Consensus 100 GfSQGGlflRa----~ierc~~-~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVARG----LIEFCDG-GPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHHHH----HHHHCCC-CCCcceEEEecCCC
Confidence 99999999988 8888775 12588898877553
No 178
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.16 E-value=0.00042 Score=63.67 Aligned_cols=134 Identities=19% Similarity=0.132 Sum_probs=81.3
Q ss_pred CceEEEEEecCCC-CCCceEEEEECCCCCChhhHHHHH---H-------------HHH------hCCCeEEEeCC-CCCC
Q 016589 107 RNALFCRSWIPVS-GELKGILIIIHGLNEHSGRYAQFA---R-------------QLT------SCNFGVYAMDW-IGHG 162 (386)
Q Consensus 107 g~~l~~~~~~p~~-~~~~p~vv~lHG~~~~~~~~~~~~---~-------------~L~------~~G~~vi~~D~-~G~G 162 (386)
+..++|..+.... ++..|+|+++-|.+|++..+..+. . .|. .+-.+++-+|. -|.|
T Consensus 49 ~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtG 128 (433)
T PLN03016 49 NVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSG 128 (433)
T ss_pred CeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCC
Confidence 5678888876543 356799999999988776432111 1 111 11267999995 4889
Q ss_pred CCCCCCCCC-CChHHHHHHHHHHHHHHHHhCC---CCCEEEEEechhhHHHHhhhhhHhhcCC---ccccceeEEEEcCc
Q 016589 163 GSDGLHGYV-PSLDHVVADTGAFLEKIKLENP---TVPCFLFGHSTGGAVVLKRTFVQAASYP---HIEAMLEGIVLSAP 235 (386)
Q Consensus 163 ~S~~~~~~~-~~~~~~~~d~~~~l~~l~~~~~---~~~i~lvGhS~Gg~~a~~~~~~~a~~~p---~~~~~v~~lvl~~p 235 (386)
.|....... .+-.+.++|+..+++..-...+ ..++++.|.|+||..+-.++..+..... +..-.++|+++-+|
T Consensus 129 fSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 129 FSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred ccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCC
Confidence 886432211 1222334677777776544442 4579999999999877662221222221 11126889999888
Q ss_pred ccccC
Q 016589 236 ALRVE 240 (386)
Q Consensus 236 ~~~~~ 240 (386)
..+..
T Consensus 209 ~t~~~ 213 (433)
T PLN03016 209 VTYMD 213 (433)
T ss_pred CcCch
Confidence 76543
No 179
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.14 E-value=0.0008 Score=59.82 Aligned_cols=65 Identities=18% Similarity=0.311 Sum_probs=55.4
Q ss_pred ccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhc
Q 016589 312 FKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 312 ~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 381 (386)
..++++|.++|.|..|+++.++...-++..+++ .+.+..+|+++|.... ..+.+.+..|+.....
T Consensus 258 ~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vPN~~H~~~~----~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 258 RDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVPNAGHSLIG----SDVVQSLRAFYNRIQN 322 (367)
T ss_pred HHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCCCCCcccch----HHHHHHHHHHHHHHHc
Confidence 366799999999999999999999999999997 4788899999997643 6778889999887543
No 180
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.13 E-value=9.7e-06 Score=77.78 Aligned_cols=122 Identities=18% Similarity=0.140 Sum_probs=71.9
Q ss_pred eEEEEEecCCCCC---CceEEEEECCCCC---Chh-hHHHHHHHHHhCCCeEEEeCCCC----CCCCCCCCCCCCChHHH
Q 016589 109 ALFCRSWIPVSGE---LKGILIIIHGLNE---HSG-RYAQFARQLTSCNFGVYAMDWIG----HGGSDGLHGYVPSLDHV 177 (386)
Q Consensus 109 ~l~~~~~~p~~~~---~~p~vv~lHG~~~---~~~-~~~~~~~~L~~~G~~vi~~D~~G----~G~S~~~~~~~~~~~~~ 177 (386)
=|+..+|.|.... +.|++|+|||.+. +.. ....-...+++++..|+.++||- +-.+...... .-..-
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~G 185 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYG 185 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhh
Confidence 4777788887653 4699999999653 221 22223344557789999999992 2212111100 13445
Q ss_pred HHHHHHHHHHHHHhC-----CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 178 VADTGAFLEKIKLEN-----PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 178 ~~d~~~~l~~l~~~~-----~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
..|...++++++.+- +.++|.|+|||.||..+.. .... |.-...+.++|+.++..
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~----~l~s-p~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSL----LLLS-PSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHH----HHHG-GGGTTSBSEEEEES--T
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccce----eeec-ccccccccccccccccc
Confidence 778888899887653 2347999999999999877 3333 44334789999988743
No 181
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.11 E-value=1.1e-05 Score=71.85 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=77.0
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCCCe---EEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEE
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCNFG---VYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLF 200 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lv 200 (386)
-+++++||++.+...|..+...+...|+. ++.+++++-. .. ++.....+.+...++.+....+..++.++
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~~~~~~~~ql~~~V~~~l~~~ga~~v~Li 132 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD-GT------YSLAVRGEQLFAYVDEVLAKTGAKKVNLI 132 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC-CC------ccccccHHHHHHHHHHHHhhcCCCceEEE
Confidence 48999999988888899888888887887 8999888551 11 13333355566666665555555679999
Q ss_pred EechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 201 GHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 201 GhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
||||||..+.. ++...++. .+|+.++.++++-..
T Consensus 133 gHS~GG~~~ry----~~~~~~~~-~~V~~~~tl~tp~~G 166 (336)
T COG1075 133 GHSMGGLDSRY----YLGVLGGA-NRVASVVTLGTPHHG 166 (336)
T ss_pred eecccchhhHH----HHhhcCcc-ceEEEEEEeccCCCC
Confidence 99999999998 88888721 278889888876443
No 182
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.00 E-value=0.00011 Score=60.38 Aligned_cols=247 Identities=12% Similarity=0.058 Sum_probs=122.7
Q ss_pred EEEEEecCCCCCCceEEEEECCCCCChhhHH-HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHH----H
Q 016589 110 LFCRSWIPVSGELKGILIIIHGLNEHSGRYA-QFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGA----F 184 (386)
Q Consensus 110 l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~----~ 184 (386)
-++..+.|. +..++-|++-|.+.+...-+ -+...+.++|...++++-|-+|....+.... ..-+.+.|+.. .
T Consensus 102 A~~~~liPQ--K~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~-~~Le~vtDlf~mG~A~ 178 (371)
T KOG1551|consen 102 ARVAWLIPQ--KMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQII-HMLEYVTDLFKMGRAT 178 (371)
T ss_pred eeeeeeccc--CcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHH-HHHHHHHHHHHhhHHH
Confidence 344555553 23456666666655443322 3455666788999999999999764332111 11122233321 1
Q ss_pred HHHHH------HhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC-CCchhhhHhhhhhhhc
Q 016589 185 LEKIK------LENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP-AHPIVGAVAPLFSLVV 257 (386)
Q Consensus 185 l~~l~------~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~-~~~~~~~~~~~~~~~~ 257 (386)
|++.. ...+..+..++|-||||.+|.. ....++. .|.-+-+.++...... .............+..
T Consensus 179 I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~----vgS~~q~---Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~ 251 (371)
T KOG1551|consen 179 IQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQ----VGSLHQK---PVATAPCLNSSKASVSATEGLLLQDTSKMKRFN 251 (371)
T ss_pred HHHHHHhcccccccCcccceeeeeecccHHHHh----hcccCCC---CccccccccccccchhhhhhhhhhhhHHHHhhc
Confidence 22221 1224558999999999999999 6776765 3433322222211100 0000000000011111
Q ss_pred CCccccCCCCCCCCCCCCHHHHHHHhcCCCCccCCcchhHHHHHHHHHHHHHh---hccCCCcc-----EEEEeeCCCCc
Q 016589 258 PKYQFKGANKRGVPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRLSSYLKR---NFKSVSVP-----FFVLHGTGDKV 329 (386)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~P-----~lii~G~~D~~ 329 (386)
..-.+... ..+.+......... ........+....+..+.+ .+....+| +.++.+++|..
T Consensus 252 ~~t~~~~~------~~r~p~Q~~~~~~~------~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Y 319 (371)
T KOG1551|consen 252 QTTNKSGY------TSRNPAQSYHLLSK------EQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAY 319 (371)
T ss_pred cCcchhhh------hhhCchhhHHHHHH------HhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCcc
Confidence 10000000 00111000000000 0000011122222222222 23344444 57888999999
Q ss_pred cChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhhhhc
Q 016589 330 TDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 330 v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 381 (386)
+|......+.+..++ +++..++ +||..-+-...+.+-+.|.+-|++.-+
T Consensus 320 ipr~gv~~lQ~~WPg--~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 320 IPRTGVRSLQEIWPG--CEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred ccccCcHHHHHhCCC--CEEEEee-cCceeeeehhchHHHHHHHHHHHhhhh
Confidence 999889999998887 8888888 589765444677888888888876543
No 183
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.98 E-value=0.00036 Score=59.13 Aligned_cols=109 Identities=15% Similarity=0.104 Sum_probs=64.3
Q ss_pred CCceEEEEECCCC--CChhhHHHHHHHHHhC----CCeEEEeCCCCCCCCCCCCCCCCChHHHHHH-HHHHHHHHHHhCC
Q 016589 121 ELKGILIIIHGLN--EHSGRYAQFARQLTSC----NFGVYAMDWIGHGGSDGLHGYVPSLDHVVAD-TGAFLEKIKLENP 193 (386)
Q Consensus 121 ~~~p~vv~lHG~~--~~~~~~~~~~~~L~~~----G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~ 193 (386)
.+.|++++.||-. .+...+.. .+.|... .-.++.+|+----. ....+ +...++.+. ..+++-++...++
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~-~dsli~~g~i~pai~vgid~~d~~~--R~~~~-~~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRI-LDSLIAAGEIPPAILVGIDYIDVKK--RREEL-HCNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHH-HHHHHHcCCCCCceEEecCCCCHHH--HHHHh-cccHHHHHHHHHHhhhhhhccCc
Confidence 5689999999832 22223333 3333333 35677777642100 00011 122222222 2334445555443
Q ss_pred ----CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccC
Q 016589 194 ----TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 194 ----~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~ 240 (386)
...-+|+|.|+||.+++. .+..+|+ ++-.++..+|.+...
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~----agl~~Pe---~FG~V~s~Sps~~~~ 215 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLY----AGLRHPE---RFGHVLSQSGSFWWT 215 (299)
T ss_pred ccccCCCcEEeccccccHHHHH----HHhcCch---hhceeeccCCccccC
Confidence 224689999999999999 9999999 888888888876554
No 184
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.97 E-value=4.4e-05 Score=72.02 Aligned_cols=105 Identities=17% Similarity=0.207 Sum_probs=67.2
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHh----------------CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTS----------------CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLE 186 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~----------------~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~ 186 (386)
.-+|+|++|..|+...-+.++..... ..|+.+++|+-+ +-..-.+. ++.+.++-+.++|+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE--e~tAm~G~--~l~dQtEYV~dAIk 164 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE--EFTAMHGH--ILLDQTEYVNDAIK 164 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc--hhhhhccH--hHHHHHHHHHHHHH
Confidence 46899999999988877776655432 136777777643 11111122 67777777777777
Q ss_pred HHHHhCC---------CCCEEEEEechhhHHHHhhhhhHhhcCCc-cccceeEEEEcCcc
Q 016589 187 KIKLENP---------TVPCFLFGHSTGGAVVLKRTFVQAASYPH-IEAMLEGIVLSAPA 236 (386)
Q Consensus 187 ~l~~~~~---------~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~-~~~~v~~lvl~~p~ 236 (386)
++...+. ...++++||||||.+|.. +..+|. ....|.-++..+.+
T Consensus 165 ~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra-----~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 165 YILSLYRGEREYASPLPHSVILVGHSMGGIVARA-----TLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHhhcccccCCCCCceEEEEeccchhHHHHH-----HHhhhhhccchhhhhhhhcCc
Confidence 7654432 123999999999999988 666663 22245445554443
No 185
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.91 E-value=0.00011 Score=66.98 Aligned_cols=88 Identities=17% Similarity=0.232 Sum_probs=65.3
Q ss_pred hHHHHHHHHHhCCCeE-----EE-eCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHh
Q 016589 138 RYAQFARQLTSCNFGV-----YA-MDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 138 ~~~~~~~~L~~~G~~v-----i~-~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~ 211 (386)
.|..+++.|.+.||.. .+ +|+|---. ..+.+...+...|+...... +.+++|+||||||.++..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~---------~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA---------ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh---------hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHH
Confidence 7999999999888752 22 67772111 34566788888888877665 679999999999999998
Q ss_pred hhhhHhhcCCc---cccceeEEEEcCccccc
Q 016589 212 RTFVQAASYPH---IEAMLEGIVLSAPALRV 239 (386)
Q Consensus 212 ~~~~~a~~~p~---~~~~v~~lvl~~p~~~~ 239 (386)
+....++ ..+.|+++|.++++...
T Consensus 136 ----fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 136 ----FLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred ----HHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 6666644 23469999998877543
No 186
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.91 E-value=0.0027 Score=52.58 Aligned_cols=101 Identities=18% Similarity=0.204 Sum_probs=62.4
Q ss_pred CCceEEEEECCCC--CC-hhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC----
Q 016589 121 ELKGILIIIHGLN--EH-SGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENP---- 193 (386)
Q Consensus 121 ~~~p~vv~lHG~~--~~-~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~---- 193 (386)
+++.+|=|+-|.. .. .-.|+.+.+.|+++||.|++.-|. .|.. +..-..+..+.....++.+....+
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~-~tfD-----H~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYV-VTFD-----HQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecC-CCCc-----HHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 3466888888832 22 234999999999999999999875 1110 000122233334444555544321
Q ss_pred CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcC
Q 016589 194 TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSA 234 (386)
Q Consensus 194 ~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~ 234 (386)
.-|++-+|||+|+-+-+. +...++. .-++-++++
T Consensus 89 ~lP~~~vGHSlGcklhlL----i~s~~~~---~r~gniliS 122 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLL----IGSLFDV---ERAGNILIS 122 (250)
T ss_pred cCCeeeeecccchHHHHH----HhhhccC---cccceEEEe
Confidence 237889999999999888 6666554 235555554
No 187
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.77 E-value=0.0016 Score=54.63 Aligned_cols=124 Identities=12% Similarity=0.142 Sum_probs=81.7
Q ss_pred EEEEecCCCCCCceEEEEECCCCCChhh-HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 016589 111 FCRSWIPVSGELKGILIIIHGLNEHSGR-YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIK 189 (386)
Q Consensus 111 ~~~~~~p~~~~~~p~vv~lHG~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~ 189 (386)
++....+....+.|.|+++-...++... .+.-.+.|... ..|+..||-..-.-+-..+. .+++++++-+.+++..++
T Consensus 91 ~F~r~~~~~r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~G 168 (415)
T COG4553 91 HFERDMPDARKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFLG 168 (415)
T ss_pred hhhhccccccCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHhC
Confidence 4444455444566788888777765544 56677777654 78999998644333322233 488999999999999887
Q ss_pred HhCCCCCEEEEEechhhHHHHhhhhhHhh-cCCccccceeEEEEcCcccccCCCCc
Q 016589 190 LENPTVPCFLFGHSTGGAVVLKRTFVQAA-SYPHIEAMLEGIVLSAPALRVEPAHP 244 (386)
Q Consensus 190 ~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~-~~p~~~~~v~~lvl~~p~~~~~~~~~ 244 (386)
.+ +++++.|.=+.-.+..+.+.++ ..|. ....+++++++.+......
T Consensus 169 p~-----~hv~aVCQP~vPvLAAisLM~~~~~p~---~PssMtlmGgPIDaR~nPT 216 (415)
T COG4553 169 PD-----AHVMAVCQPTVPVLAAISLMEEDGDPN---VPSSMTLMGGPIDARKNPT 216 (415)
T ss_pred CC-----CcEEEEecCCchHHHHHHHHHhcCCCC---CCceeeeecCccccccCcH
Confidence 64 6888888877666553333333 3454 5667899998887765443
No 188
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.73 E-value=0.00011 Score=53.01 Aligned_cols=60 Identities=20% Similarity=0.217 Sum_probs=52.1
Q ss_pred CccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHhh
Q 016589 316 SVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLEK 378 (386)
Q Consensus 316 ~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 378 (386)
..|+|++.++.|+.+|.+.++.+.+.+++ ++++.+++.||..+.. ...-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~--s~lvt~~g~gHg~~~~-~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG--SRLVTVDGAGHGVYAG-GSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC--ceEEEEeccCcceecC-CChHHHHHHHHHHHc
Confidence 58999999999999999999999999987 8999999999988753 455667778888864
No 189
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.71 E-value=0.00072 Score=55.13 Aligned_cols=78 Identities=13% Similarity=0.237 Sum_probs=48.8
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCe-EEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEE
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFG-VYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFG 201 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvG 201 (386)
+..|||..|||.+...+.++.. ..+|. ++.+|||..- ++. | + . ..+.+.||+
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~---~~~~D~l~~yDYr~l~-----------~d~---~-------~-~--~y~~i~lvA 63 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL---PENYDVLICYDYRDLD-----------FDF---D-------L-S--GYREIYLVA 63 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC---CCCccEEEEecCcccc-----------ccc---c-------c-c--cCceEEEEE
Confidence 4699999999998887766531 23455 4667887321 110 1 1 1 124699999
Q ss_pred echhhHHHHhhhhhHhhcCCccccceeEEEEcCcc
Q 016589 202 HSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 202 hS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
+|||-.+|.. +....| ++..|.+++.
T Consensus 64 WSmGVw~A~~----~l~~~~-----~~~aiAINGT 89 (213)
T PF04301_consen 64 WSMGVWAANR----VLQGIP-----FKRAIAINGT 89 (213)
T ss_pred EeHHHHHHHH----HhccCC-----cceeEEEECC
Confidence 9999999888 443332 4555555544
No 190
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.54 E-value=0.00014 Score=61.51 Aligned_cols=105 Identities=11% Similarity=0.079 Sum_probs=52.1
Q ss_pred eEEEEECCCCCCh---hhHHHHHHHHH--hCCCeEEEeCCCCCCCC-CCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCE
Q 016589 124 GILIIIHGLNEHS---GRYAQFARQLT--SCNFGVYAMDWIGHGGS-DGLHGYVPSLDHVVADTGAFLEKIKLENPTVPC 197 (386)
Q Consensus 124 p~vv~lHG~~~~~---~~~~~~~~~L~--~~G~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i 197 (386)
.+||+.||+|.+. ..+..+.+.+. -.|--|..++.- -+.+ +...+..-...+.++.+.+.+.....-.. -+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~--G~ 82 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELAN--GF 82 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT---E
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhc--ce
Confidence 4799999999753 24444444333 237778888762 2211 11111111334444555555444332222 39
Q ss_pred EEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 198 FLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 198 ~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
.++|+|.||.+.-. ++.+.|+. .|+.+|.+++.-
T Consensus 83 ~~IGfSQGgl~lRa----~vq~c~~~--~V~nlISlggph 116 (279)
T PF02089_consen 83 NAIGFSQGGLFLRA----YVQRCNDP--PVHNLISLGGPH 116 (279)
T ss_dssp EEEEETCHHHHHHH----HHHH-TSS---EEEEEEES--T
T ss_pred eeeeeccccHHHHH----HHHHCCCC--CceeEEEecCcc
Confidence 99999999999988 88887652 688899887553
No 191
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.51 E-value=0.0011 Score=58.41 Aligned_cols=108 Identities=25% Similarity=0.344 Sum_probs=77.9
Q ss_pred eEEEEECCCCCChhhHHH---HHHHHH-hCCCeEEEeCCCCCCCCCCCC----------CCCCChHHHHHHHHHHHHHHH
Q 016589 124 GILIIIHGLNEHSGRYAQ---FARQLT-SCNFGVYAMDWIGHGGSDGLH----------GYVPSLDHVVADTGAFLEKIK 189 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~---~~~~L~-~~G~~vi~~D~~G~G~S~~~~----------~~~~~~~~~~~d~~~~l~~l~ 189 (386)
.+|+|.-|.-++.+.|.. +.-.++ +.+--++-.++|-+|+|-+-. ++ .+.++...|...++..++
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgy-LtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGY-LTSEQALADFAELLTFLK 159 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhcc-ccHHHHHHHHHHHHHHHh
Confidence 578888898877665532 222333 336789999999999985321 22 267788899999999998
Q ss_pred HhCC--CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEE-EcCccccc
Q 016589 190 LENP--TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIV-LSAPALRV 239 (386)
Q Consensus 190 ~~~~--~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lv-l~~p~~~~ 239 (386)
.+.. ..+++.+|-|+||+++.. +=.++|. .+.|.. ..+|...+
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAW----fRlKYPH---iv~GAlAaSAPvl~f 205 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAW----FRLKYPH---IVLGALAASAPVLYF 205 (492)
T ss_pred hccccccCcEEEecCchhhHHHHH----HHhcChh---hhhhhhhccCceEee
Confidence 8742 348999999999999999 8999998 455543 34454433
No 192
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.33 E-value=0.0027 Score=52.74 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=66.2
Q ss_pred eEEEEECCCCCChhh--HHHHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEE
Q 016589 124 GILIIIHGLNEHSGR--YAQFARQLTSC-NFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLF 200 (386)
Q Consensus 124 p~vv~lHG~~~~~~~--~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lv 200 (386)
-++|++||.+++... +..+.+.+.+. |..|+++|. |-| -...+.....+.++-+.+.+....+.. .-+.++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g---~~~s~l~pl~~Qv~~~ce~v~~m~~ls--qGyniv 97 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG---IKDSSLMPLWEQVDVACEKVKQMPELS--QGYNIV 97 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC---cchhhhccHHHHHHHHHHHHhcchhcc--CceEEE
Confidence 368899999987766 67777777643 888898886 344 111122244555555555555333322 238999
Q ss_pred EechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 201 GHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 201 GhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
|.|.||.++-. ++..-++ ..|+..|.++++-
T Consensus 98 g~SQGglv~Ra----liq~cd~--ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 98 GYSQGGLVARA----LIQFCDN--PPVKNFISLGGPH 128 (296)
T ss_pred EEccccHHHHH----HHHhCCC--CCcceeEeccCCc
Confidence 99999999988 6665554 3688888776543
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.28 E-value=0.0045 Score=49.43 Aligned_cols=108 Identities=19% Similarity=0.351 Sum_probs=66.7
Q ss_pred CCceEEEEECCCCCC-hhhH---------------HHHHHHHHhCCCeEEEeCCCC----CCCCCCCCCCCCChHHHHHH
Q 016589 121 ELKGILIIIHGLNEH-SGRY---------------AQFARQLTSCNFGVYAMDWIG----HGGSDGLHGYVPSLDHVVAD 180 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~-~~~~---------------~~~~~~L~~~G~~vi~~D~~G----~G~S~~~~~~~~~~~~~~~d 180 (386)
.+...+|+|||-|-- .+.| -+++++-.+.||.|++.+--- +-.-+.+..+. ..-++.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyi---rt~veh 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYI---RTPVEH 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhc---cchHHH
Confidence 445689999997742 2233 245556667899999988541 11111121221 122334
Q ss_pred HHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcc
Q 016589 181 TGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 181 ~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
..-+...+........+.++.||+||...+. +..++|+. ++|.++.+.+.+
T Consensus 176 ~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~----l~~~f~~d-~~v~aialTDs~ 226 (297)
T KOG3967|consen 176 AKYVWKNIVLPAKAESVFVVAHSYGGSLTLD----LVERFPDD-ESVFAIALTDSA 226 (297)
T ss_pred HHHHHHHHhcccCcceEEEEEeccCChhHHH----HHHhcCCc-cceEEEEeeccc
Confidence 4444444443333446999999999999999 88898874 577777776655
No 194
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.27 E-value=0.0034 Score=56.87 Aligned_cols=110 Identities=18% Similarity=0.230 Sum_probs=79.3
Q ss_pred CceEEEEECCCCCChhhH-----HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCC------CCChHHHHHHHHHHHHHHHH
Q 016589 122 LKGILIIIHGLNEHSGRY-----AQFARQLTSCNFGVYAMDWIGHGGSDGLHGY------VPSLDHVVADTGAFLEKIKL 190 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~------~~~~~~~~~d~~~~l~~l~~ 190 (386)
..|+.|+|-|=+.-...| ..+...-.+-|-.|+..++|-+|.|.+.... ..+......|+..+|+.+..
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 357888888855433333 1122222244889999999999988543211 12567789999999999987
Q ss_pred hCC---CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccc
Q 016589 191 ENP---TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 191 ~~~---~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
+.+ +.|++.+|-|+-|.++.. +=.++|+ .+.|.|..+.++.
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW----~R~~yPe---l~~GsvASSapv~ 208 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAW----FREKYPE---LTVGSVASSAPVL 208 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHH----HHHhCch---hheeeccccccee
Confidence 762 238999999999999999 8899999 6877777666643
No 195
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.22 E-value=0.014 Score=49.02 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=34.0
Q ss_pred CCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 194 TVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 194 ~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
.++..++|||+||.+++. ....+|+ .+...++++|....
T Consensus 136 ~~~~~i~GhSlGGLfvl~----aLL~~p~---~F~~y~~~SPSlWw 174 (264)
T COG2819 136 SERTAIIGHSLGGLFVLF----ALLTYPD---CFGRYGLISPSLWW 174 (264)
T ss_pred cccceeeeecchhHHHHH----HHhcCcc---hhceeeeecchhhh
Confidence 346899999999999999 8888999 89999999997654
No 196
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.20 E-value=0.002 Score=50.52 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCcc-ccceeEEEEcCccc
Q 016589 174 LDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHI-EAMLEGIVLSAPAL 237 (386)
Q Consensus 174 ~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~-~~~v~~lvl~~p~~ 237 (386)
+......+...++.....++..+++++|||+||.+|.. ++...... ......++..+++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l----~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGL----AGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHH----HHHHHHhccCCCceEEEEeCCCc
Confidence 44556667777777666566778999999999999998 55544321 01344566655543
No 197
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.17 E-value=0.0016 Score=52.25 Aligned_cols=107 Identities=23% Similarity=0.305 Sum_probs=62.3
Q ss_pred EEEEECCCCCChhh---HHHHHHHHH----hCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCE
Q 016589 125 ILIIIHGLNEHSGR---YAQFARQLT----SCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPC 197 (386)
Q Consensus 125 ~vv~lHG~~~~~~~---~~~~~~~L~----~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i 197 (386)
.||+..|.+..... -..+.+.+. .....+..++||-..... .+..+...-+.++...++.....-|+.++
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP~~ki 83 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCPNTKI 83 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHSTTSEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 45666665543321 122333333 223556667787432211 22235666678888888888888888899
Q ss_pred EEEEechhhHHHHhhhhhHhhc---CCccccceeEEEEcCcccc
Q 016589 198 FLFGHSTGGAVVLKRTFVQAAS---YPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 198 ~lvGhS~Gg~~a~~~~~~~a~~---~p~~~~~v~~lvl~~p~~~ 238 (386)
+|+|+|+|+.++.. ++.. .+...++|.++++++-+..
T Consensus 84 vl~GYSQGA~V~~~----~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 84 VLAGYSQGAMVVGD----ALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp EEEEETHHHHHHHH----HHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred EEEecccccHHHHH----HHHhccCChhhhhhEEEEEEecCCcc
Confidence 99999999999999 5544 2333448999888875543
No 198
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.15 E-value=0.0012 Score=61.41 Aligned_cols=94 Identities=12% Similarity=0.062 Sum_probs=61.9
Q ss_pred hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC-CCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhH
Q 016589 138 RYAQFARQLTSCNFGVYAMDWIGHGGSDGLH-GYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQ 216 (386)
Q Consensus 138 ~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~ 216 (386)
.|..+++.|++.||. -.|+.|...--+.. .....-+.+...+...|+.+....++.+++|+||||||.+++. +
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ly----F 230 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLH----F 230 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHH----H
Confidence 578999999999996 34444433211111 0011235667788888888776665678999999999999988 5
Q ss_pred hhcC-----------Cc-cccceeEEEEcCccc
Q 016589 217 AASY-----------PH-IEAMLEGIVLSAPAL 237 (386)
Q Consensus 217 a~~~-----------p~-~~~~v~~lvl~~p~~ 237 (386)
...- ++ ..+.|++.|.+++..
T Consensus 231 L~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 231 MKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 5422 11 123578888887764
No 199
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.15 E-value=0.0023 Score=49.27 Aligned_cols=62 Identities=19% Similarity=0.230 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 176 HVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
...+.+.+.++.+..+++..++++.|||+||.+|...+..+....+.....+..+..-+|..
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 34456666666666676666899999999999999833333333322112566666656654
No 200
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.13 E-value=0.022 Score=50.19 Aligned_cols=69 Identities=10% Similarity=0.052 Sum_probs=54.4
Q ss_pred cCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEE--EcCCCCCcccCCccHHHHHHHHHHHHhhhhc
Q 016589 313 KSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIK--LYEGLLHDLLFELERDEVAQDIIVWLEKKLG 381 (386)
Q Consensus 313 ~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~--~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 381 (386)
.....+.+.+++..|.++|.+..+++.+.....+..+. -+.++-|..+....+....+...+|++....
T Consensus 222 ~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 222 NELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred hcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 33467889999999999999999998777665555444 4567888887776899999999999987653
No 201
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.09 E-value=0.0041 Score=52.38 Aligned_cols=63 Identities=16% Similarity=0.163 Sum_probs=40.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 173 SLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
.+.....++...+..+..+++..++++.|||+||.+|..++..+....+. ..+..+.+-+|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~--~~i~~~tFg~P~v 168 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPG--SDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCC--CceEEEEeCCCCC
Confidence 44555666677777777667777899999999999999822222222211 1466666666654
No 202
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.04 E-value=0.0029 Score=51.32 Aligned_cols=69 Identities=20% Similarity=0.185 Sum_probs=43.9
Q ss_pred HHHHHHhCCCeEEEeCCCCCCCCCCC----CCCCCChHHHHHHHHHHHHHHHHhC-CCCCEEEEEechhhHHHHh
Q 016589 142 FARQLTSCNFGVYAMDWIGHGGSDGL----HGYVPSLDHVVADTGAFLEKIKLEN-PTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 142 ~~~~L~~~G~~vi~~D~~G~G~S~~~----~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~i~lvGhS~Gg~~a~~ 211 (386)
++..+... .+|+++=||=....... .....-.+-...|+.++.++...+. ++++++|+|||+|+.+..+
T Consensus 38 qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~ 111 (207)
T PF11288_consen 38 QASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLR 111 (207)
T ss_pred HhhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHH
Confidence 44555444 78999998843221111 0011123334578888887665554 5669999999999999999
No 203
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.95 E-value=0.0023 Score=41.05 Aligned_cols=44 Identities=16% Similarity=0.103 Sum_probs=27.0
Q ss_pred cccceeEeccCCceEEEEEecCCC-----CCCceEEEEECCCCCChhhH
Q 016589 96 RWSTSLFFGVKRNALFCRSWIPVS-----GELKGILIIIHGLNEHSGRY 139 (386)
Q Consensus 96 ~~~~~~~~~~~g~~l~~~~~~p~~-----~~~~p~vv~lHG~~~~~~~~ 139 (386)
..++..+++.||.-|......+.. ..++|+|++.||+.+++..|
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 357788999999988776664433 25689999999999999887
No 204
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.90 E-value=0.065 Score=42.66 Aligned_cols=107 Identities=17% Similarity=0.243 Sum_probs=65.4
Q ss_pred CceEEEEECCCCCChhhH--------HHHHHHHH------hCCCeEEEeCCCCCCCCCCC---CCCCCChHHHHHHHHHH
Q 016589 122 LKGILIIIHGLNEHSGRY--------AQFARQLT------SCNFGVYAMDWIGHGGSDGL---HGYVPSLDHVVADTGAF 184 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~--------~~~~~~L~------~~G~~vi~~D~~G~G~S~~~---~~~~~~~~~~~~d~~~~ 184 (386)
..-+.++++|.+.+...+ ..+.+.+. ..+=.|-++-|.||-.-... .......+.-..++..+
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f 97 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARF 97 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHH
Confidence 356889999987654431 11222111 12335555555555322010 01111345667889999
Q ss_pred HHHHHHhC-CCCCEEEEEechhhHHHHhhhhhHhhcC-CccccceeEEEEcCcc
Q 016589 185 LEKIKLEN-PTVPCFLFGHSTGGAVVLKRTFVQAASY-PHIEAMLEGIVLSAPA 236 (386)
Q Consensus 185 l~~l~~~~-~~~~i~lvGhS~Gg~~a~~~~~~~a~~~-p~~~~~v~~lvl~~p~ 236 (386)
++.|.... +..++.++|||+|+.++-. |++. +. .++.+|+++.+
T Consensus 98 ~~gl~a~~~~~~~~tv~GHSYGS~v~G~-----A~~~~~~---~vddvv~~GSP 143 (177)
T PF06259_consen 98 LDGLRATHGPDAHLTVVGHSYGSTVVGL-----AAQQGGL---RVDDVVLVGSP 143 (177)
T ss_pred HHHhhhhcCCCCCEEEEEecchhHHHHH-----HhhhCCC---CcccEEEECCC
Confidence 99998776 5668999999999999988 5555 44 67777776543
No 205
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.86 E-value=0.0055 Score=56.41 Aligned_cols=116 Identities=13% Similarity=0.118 Sum_probs=67.0
Q ss_pred EEEEecCCCCCCceEEEEECCCCC---ChhhHHHHHHHHH-hCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 016589 111 FCRSWIPVSGELKGILIIIHGLNE---HSGRYAQFARQLT-SCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLE 186 (386)
Q Consensus 111 ~~~~~~p~~~~~~p~vv~lHG~~~---~~~~~~~~~~~L~-~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~ 186 (386)
.|+.|-++.+.++-.|+-+||.|. ++.......+.++ ..|+-|+.+||--..+.+- ....+.+.-+.-
T Consensus 384 ~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPF--------PRaleEv~fAYc 455 (880)
T KOG4388|consen 384 SLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPF--------PRALEEVFFAYC 455 (880)
T ss_pred ccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCC--------CcHHHHHHHHHH
Confidence 355555544455668999999874 3444444444444 3489999999965444332 222344444444
Q ss_pred HHHHh-----CCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 187 KIKLE-----NPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 187 ~l~~~-----~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
|+..+ ..+++|+++|.|.||.+.+-++..+++..= +..+|+++.-++.
T Consensus 456 W~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gv---RvPDGl~laY~pt 508 (880)
T KOG4388|consen 456 WAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGV---RVPDGLMLAYPPT 508 (880)
T ss_pred HHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCC---CCCCceEEecChh
Confidence 44322 235689999999999987662221222211 1346777765554
No 206
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.71 E-value=0.0028 Score=61.03 Aligned_cols=118 Identities=19% Similarity=0.184 Sum_probs=68.1
Q ss_pred eEEEEEecCCCCCC--ceEEEEECCCCCChh---hH--HHHHHHHHhCCCeEEEeCCCC----CCCCC--CCCCCCCChH
Q 016589 109 ALFCRSWIPVSGEL--KGILIIIHGLNEHSG---RY--AQFARQLTSCNFGVYAMDWIG----HGGSD--GLHGYVPSLD 175 (386)
Q Consensus 109 ~l~~~~~~p~~~~~--~p~vv~lHG~~~~~~---~~--~~~~~~L~~~G~~vi~~D~~G----~G~S~--~~~~~~~~~~ 175 (386)
-++.-+|.|..... .|++|++||.+-... .+ ......+..+...|+.+.||- +.... ..++.
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN----- 170 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGN----- 170 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCc-----
Confidence 35566666765433 799999999764222 23 122223334468899999982 21111 11121
Q ss_pred HHHHHHHHHHHHHHHhC-----CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcc
Q 016589 176 HVVADTGAFLEKIKLEN-----PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~-----~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
....|...++++++..- +..+|.++|||.||..+.. ...-|.....+..+|..++.
T Consensus 171 ~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~-----l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 171 LGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSL-----LTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHH-----HhcCHhhHHHHHHHHhhccc
Confidence 12336667777765432 3447999999999999877 33444322345555665544
No 207
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.63 E-value=0.0068 Score=54.71 Aligned_cols=76 Identities=17% Similarity=0.118 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHhCCCe------EEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHH
Q 016589 137 GRYAQFARQLTSCNFG------VYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVL 210 (386)
Q Consensus 137 ~~~~~~~~~L~~~G~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~ 210 (386)
..|..+++.|..-||. -..+|+|-.- .. ....+.+...+...++..-...+++|++|++|||||.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~---~~---~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSY---HN---SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhcc---CC---hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 4688999999988886 4557777211 10 1145667788888888887777778999999999999999
Q ss_pred hhhhhHhhcCCc
Q 016589 211 KRTFVQAASYPH 222 (386)
Q Consensus 211 ~~~~~~a~~~p~ 222 (386)
. +.-.+++
T Consensus 198 y----Fl~w~~~ 205 (473)
T KOG2369|consen 198 Y----FLKWVEA 205 (473)
T ss_pred H----HHhcccc
Confidence 8 7777766
No 208
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.46 E-value=0.013 Score=45.19 Aligned_cols=59 Identities=12% Similarity=0.093 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 174 LDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 174 ~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
..+.++--.+.-+++.++.-....++-|.||||..|.. +..++|+ .+.++|..++.++.
T Consensus 80 ~adr~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~n----fvfrhP~---lftkvialSGvYda 138 (227)
T COG4947 80 AADRAERHRAYERYVIEEALPGSTIVSGCSMGAYHAAN----FVFRHPH---LFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccccccchhhhhhhh----hheeChh---HhhhheeecceeeH
Confidence 34445555555555555432234678899999999999 9999999 78889999988765
No 209
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.16 E-value=0.025 Score=51.71 Aligned_cols=94 Identities=18% Similarity=0.142 Sum_probs=63.9
Q ss_pred CCCCCCceEEEEECCCCCChhhHHHHHHH-------------------HHhCCCeEEEeC-CCCCCCCCC-CCCCCCChH
Q 016589 117 PVSGELKGILIIIHGLNEHSGRYAQFARQ-------------------LTSCNFGVYAMD-WIGHGGSDG-LHGYVPSLD 175 (386)
Q Consensus 117 p~~~~~~p~vv~lHG~~~~~~~~~~~~~~-------------------L~~~G~~vi~~D-~~G~G~S~~-~~~~~~~~~ 175 (386)
|.++.++|+|+++.|.+|++..+..+.+. +.+. -.++-+| .-|.|.|.. ......+..
T Consensus 95 ~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~ 173 (498)
T COG2939 95 PNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFE 173 (498)
T ss_pred CCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchh
Confidence 34446799999999999988877555321 1111 3688899 558888874 223333566
Q ss_pred HHHHHHHHHHHHHHHhC-----CCCCEEEEEechhhHHHHh
Q 016589 176 HVVADTGAFLEKIKLEN-----PTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~-----~~~~i~lvGhS~Gg~~a~~ 211 (386)
...+|+..+.+.+.... ...+.+|+|.|+||.-+-.
T Consensus 174 ~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~ 214 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPV 214 (498)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHH
Confidence 66777777776654332 2247999999999998877
No 210
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.97 E-value=0.021 Score=47.61 Aligned_cols=53 Identities=25% Similarity=0.346 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCC-ccccceeEEEEcCcc
Q 016589 179 ADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYP-HIEAMLEGIVLSAPA 236 (386)
Q Consensus 179 ~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p-~~~~~v~~lvl~~p~ 236 (386)
....+.++.+....+. ++.+.|||.||.+|.. .++..+ +...+|..+...+++
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~y----aa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQY----AAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHH----HHHHccHHHhhheeEEEEeeCC
Confidence 3445556665555544 5999999999999998 555532 233478888766554
No 211
>PLN02454 triacylglycerol lipase
Probab=95.76 E-value=0.024 Score=51.07 Aligned_cols=36 Identities=17% Similarity=0.125 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCC--EEEEEechhhHHHHh
Q 016589 176 HVVADTGAFLEKIKLENPTVP--CFLFGHSTGGAVVLK 211 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~~~~~--i~lvGhS~Gg~~a~~ 211 (386)
...+++...++.+...++..+ |++.|||+||.+|+.
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtL 244 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATL 244 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHH
Confidence 456778888888887776655 999999999999998
No 212
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.62 E-value=0.26 Score=49.95 Aligned_cols=99 Identities=16% Similarity=0.187 Sum_probs=59.9
Q ss_pred CCceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEE
Q 016589 121 ELKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLF 200 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lv 200 (386)
+..|++.|+|..-+....+..++..|. .|-||..........+++..+.- .|+.++.-.|..|..++
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~vP~dSies~A~~---yirqirkvQP~GPYrl~ 2187 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAVPLDSIESLAAY---YIRQIRKVQPEGPYRLA 2187 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccCCcchHHHHHHH---HHHHHHhcCCCCCeeee
Confidence 446899999999887777777666652 23344322111111244444333 44555555566789999
Q ss_pred EechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 201 GHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 201 GhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
|+|+|+.++.. +|..-.+.. ....+|++++..
T Consensus 2188 GYSyG~~l~f~----ma~~Lqe~~-~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2188 GYSYGACLAFE----MASQLQEQQ-SPAPLILLDGSP 2219 (2376)
T ss_pred ccchhHHHHHH----HHHHHHhhc-CCCcEEEecCch
Confidence 99999999999 544332211 234477776653
No 213
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.52 E-value=0.27 Score=42.36 Aligned_cols=135 Identities=19% Similarity=0.250 Sum_probs=87.3
Q ss_pred ccCCceEEEEEecCCCC--CCceEEEEECCCCCChhh----HHHHH-----------HHHHhCCCeEEEeCCC-CCCCCC
Q 016589 104 GVKRNALFCRSWIPVSG--ELKGILIIIHGLNEHSGR----YAQFA-----------RQLTSCNFGVYAMDWI-GHGGSD 165 (386)
Q Consensus 104 ~~~g~~l~~~~~~p~~~--~~~p~vv~lHG~~~~~~~----~~~~~-----------~~L~~~G~~vi~~D~~-G~G~S~ 165 (386)
..++...++.+|..... ..+|..+.+.|.++.+.. |+.+- ..| + ...++.+|-| |.|.|-
T Consensus 10 vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWl-k-~adllfvDnPVGaGfSy 87 (414)
T KOG1283|consen 10 VRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWL-K-DADLLFVDNPVGAGFSY 87 (414)
T ss_pred eecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhh-h-hccEEEecCCCcCceee
Confidence 34566666666653322 457899999998765432 33221 122 2 2567788877 777763
Q ss_pred --CCCCCCCChHHHHHHHHHHHHHHHHhC---CCCCEEEEEechhhHHHHhhhhh--HhhcCCccccceeEEEEcCcccc
Q 016589 166 --GLHGYVPSLDHVVADTGAFLEKIKLEN---PTVPCFLFGHSTGGAVVLKRTFV--QAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 166 --~~~~~~~~~~~~~~d~~~~l~~l~~~~---~~~~i~lvGhS~Gg~~a~~~~~~--~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
+...|..+..+.+.|+..+++.+-..+ ...|++++..|+||-++...+.. .|.+..++.-.+.++++-+++++
T Consensus 88 Vdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 88 VDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 444555577888999999999886654 35589999999999998771000 23344444446778888887776
Q ss_pred cC
Q 016589 239 VE 240 (386)
Q Consensus 239 ~~ 240 (386)
+.
T Consensus 168 P~ 169 (414)
T KOG1283|consen 168 PE 169 (414)
T ss_pred hh
Confidence 54
No 214
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.46 E-value=0.04 Score=40.16 Aligned_cols=42 Identities=7% Similarity=-0.016 Sum_probs=26.4
Q ss_pred eeEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHHH
Q 016589 100 SLFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQF 142 (386)
Q Consensus 100 ~~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~~ 142 (386)
.+.+..+|..||+....+.. ....+||++|||++|-..|..+
T Consensus 70 hf~t~I~g~~iHFih~rs~~-~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 70 HFKTEIDGLDIHFIHVRSKR-PNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp EEEEEETTEEEEEEEE--S--TT-EEEEEE--SS--GGGGHHH
T ss_pred CeeEEEeeEEEEEEEeeCCC-CCCeEEEEECCCCccHHhHHhh
Confidence 45556689999999887644 4467899999999998877654
No 215
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.43 E-value=0.055 Score=48.27 Aligned_cols=105 Identities=17% Similarity=0.151 Sum_probs=80.3
Q ss_pred CCceEEEEECCCCCChhhHH-HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCC--CChHHHHHHHHHHHHHHHHhCCCCCE
Q 016589 121 ELKGILIIIHGLNEHSGRYA-QFARQLTSCNFGVYAMDWIGHGGSDGLHGYV--PSLDHVVADTGAFLEKIKLENPTVPC 197 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~--~~~~~~~~d~~~~l~~l~~~~~~~~i 197 (386)
..+|+|++.-|++.+..-.. .....| + -+-+.+++|-+|.|.+.+... .++.+.+.|...+++.++.-+++ ++
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Ll-d--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~-kW 136 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLL-D--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPG-KW 136 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhh-c--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccC-Cc
Confidence 44789999999887644332 333333 3 478899999999997654321 37888999999999999998854 79
Q ss_pred EEEEechhhHHHHhhhhhHhhcCCccccceeEEEE-cCcc
Q 016589 198 FLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVL-SAPA 236 (386)
Q Consensus 198 ~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl-~~p~ 236 (386)
+--|.|=||+.++. +=.-+|+ .|++.|. ++|.
T Consensus 137 ISTG~SKGGmTa~y----~rrFyP~---DVD~tVaYVAP~ 169 (448)
T PF05576_consen 137 ISTGGSKGGMTAVY----YRRFYPD---DVDGTVAYVAPN 169 (448)
T ss_pred eecCcCCCceeEEE----EeeeCCC---CCCeeeeeeccc
Confidence 99999999999988 7777898 7888766 5554
No 216
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.23 E-value=0.037 Score=44.01 Aligned_cols=64 Identities=19% Similarity=0.313 Sum_probs=48.8
Q ss_pred CccEEEEeeCCCCccChHHHHHHHHHh---hcCCCcEEEcCCCCCcccCCcc--HHHHHHHHHHHHhhh
Q 016589 316 SVPFFVLHGTGDKVTDPLASQDLYNEA---ASRFKDIKLYEGLLHDLLFELE--RDEVAQDIIVWLEKK 379 (386)
Q Consensus 316 ~~P~lii~G~~D~~v~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~~ 379 (386)
++++|-|-|+.|.++.+.++....... +...+..++.+|+||+..+... .+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 568888999999999988776655554 3333566778999999877622 578899999999763
No 217
>PLN02310 triacylglycerol lipase
Probab=95.23 E-value=0.054 Score=48.80 Aligned_cols=17 Identities=47% Similarity=0.640 Sum_probs=15.7
Q ss_pred CCEEEEEechhhHHHHh
Q 016589 195 VPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 195 ~~i~lvGhS~Gg~~a~~ 211 (386)
.+|.+.|||+||.+|+.
T Consensus 209 ~sI~vTGHSLGGALAtL 225 (405)
T PLN02310 209 VSLTVTGHSLGGALALL 225 (405)
T ss_pred ceEEEEcccHHHHHHHH
Confidence 46999999999999998
No 218
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.20 E-value=0.26 Score=46.30 Aligned_cols=121 Identities=25% Similarity=0.388 Sum_probs=73.0
Q ss_pred ceEEEEEecCCCCCCceEEEEECCCCCChhh-HHH----HHHHHHhCCCeEEEeCCCCCCCCCC--CCCCCCChHHH---
Q 016589 108 NALFCRSWIPVSGELKGILIIIHGLNEHSGR-YAQ----FARQLTSCNFGVYAMDWIGHGGSDG--LHGYVPSLDHV--- 177 (386)
Q Consensus 108 ~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~-~~~----~~~~L~~~G~~vi~~D~~G~G~S~~--~~~~~~~~~~~--- 177 (386)
..|.+.+|.|..=. ..++.+-|.+..... +.. +...+ .+||.++.-|- ||..+.. ......+.+..
T Consensus 15 ~~i~fev~LP~~WN--gR~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~df 90 (474)
T PF07519_consen 15 PNIRFEVWLPDNWN--GRFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDF 90 (474)
T ss_pred ceEEEEEECChhhc--cCeEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHH
Confidence 38889999997212 245555554433222 222 34445 67999999995 6655533 11111122221
Q ss_pred ----HHHHHHHHHHHHHhC---CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 178 ----VADTGAFLEKIKLEN---PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 178 ----~~d~~~~l~~l~~~~---~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
+.+...+-+.+.+.+ +...-+..|.|.||.-++. .|.++|+ .++|++..+|....
T Consensus 91 a~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~----~AQryP~---dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 91 AYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM----AAQRYPE---DFDGILAGAPAINW 152 (474)
T ss_pred HhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH----HHHhChh---hcCeEEeCCchHHH
Confidence 112222222222221 3346889999999999999 9999999 89999999998644
No 219
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.96 E-value=0.067 Score=49.48 Aligned_cols=44 Identities=27% Similarity=0.380 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCc
Q 016589 179 ADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPH 222 (386)
Q Consensus 179 ~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~ 222 (386)
+++..+++..........+.+.|||+||.+|+..++.++...|.
T Consensus 302 ~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~ 345 (525)
T PLN03037 302 EEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA 345 (525)
T ss_pred HHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC
Confidence 44444444433222233699999999999999844434444454
No 220
>PLN02571 triacylglycerol lipase
Probab=94.70 E-value=0.11 Score=46.97 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHhCCCC--CEEEEEechhhHHHHh
Q 016589 177 VVADTGAFLEKIKLENPTV--PCFLFGHSTGGAVVLK 211 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~--~i~lvGhS~Gg~~a~~ 211 (386)
..+++.+.++.+...+++. ++++.|||+||.+|+.
T Consensus 206 ar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtL 242 (413)
T PLN02571 206 ARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATL 242 (413)
T ss_pred HHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHH
Confidence 3445555555555554432 6899999999999998
No 221
>PLN02408 phospholipase A1
Probab=94.63 E-value=0.13 Score=45.78 Aligned_cols=41 Identities=12% Similarity=0.095 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHhCCCC--CEEEEEechhhHHHHhhhhhHh
Q 016589 177 VVADTGAFLEKIKLENPTV--PCFLFGHSTGGAVVLKRTFVQA 217 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~--~i~lvGhS~Gg~~a~~~~~~~a 217 (386)
..+.+.+.++.+...+++. .|++.|||+||.+|...+..++
T Consensus 180 ~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 180 LQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 3445555566665555543 4999999999999998333333
No 222
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.61 E-value=0.32 Score=43.20 Aligned_cols=90 Identities=21% Similarity=0.193 Sum_probs=57.5
Q ss_pred CeEEEeCCC-CCCCCCCCCC-CCCChHHHHHHHHHHHHHHHHhCC---CCCEEEEEechhhHHHHhhhhhHhhcCC---c
Q 016589 151 FGVYAMDWI-GHGGSDGLHG-YVPSLDHVVADTGAFLEKIKLENP---TVPCFLFGHSTGGAVVLKRTFVQAASYP---H 222 (386)
Q Consensus 151 ~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~---~~~i~lvGhS~Gg~~a~~~~~~~a~~~p---~ 222 (386)
.+++-+|.| |.|.|-.... ...+-+..++|+..+++..-...| ..+++|.|-|+||..+-.++..+..... +
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899998 8898864322 212223445888888877665553 4589999999999977662222222221 1
Q ss_pred cccceeEEEEcCcccccC
Q 016589 223 IEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 223 ~~~~v~~lvl~~p~~~~~ 240 (386)
..-.++|+++-+|..+..
T Consensus 82 ~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 82 PPINLQGYMLGNPVTYMD 99 (319)
T ss_pred CceeeeEEEeCCCCCCcc
Confidence 112688999988887654
No 223
>PLN00413 triacylglycerol lipase
Probab=94.41 E-value=0.067 Score=48.96 Aligned_cols=32 Identities=38% Similarity=0.464 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCCCCCEEEEEechhhHHHHh
Q 016589 180 DTGAFLEKIKLENPTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 180 d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~ 211 (386)
.+...++.+..+++..++++.|||+||.+|..
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtL 300 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAIL 300 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHH
Confidence 45555566656677778999999999999998
No 224
>PLN02162 triacylglycerol lipase
Probab=94.20 E-value=0.076 Score=48.48 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEechhhHHHHh
Q 016589 179 ADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 179 ~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~ 211 (386)
..+.+.++.+..++++.++++.|||+||.+|..
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtL 294 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAAL 294 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHH
Confidence 345555555555566668999999999999988
No 225
>PLN02934 triacylglycerol lipase
Probab=94.05 E-value=0.094 Score=48.44 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEechhhHHHHh
Q 016589 179 ADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 179 ~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~ 211 (386)
..+...++.+..++++.++++.|||+||.+|..
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtL 337 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAIL 337 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHH
Confidence 346666676667777778999999999999998
No 226
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.44 E-value=0.17 Score=42.68 Aligned_cols=51 Identities=22% Similarity=0.349 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcc
Q 016589 177 VVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
+..+..+++..++..+++.++.+-|||+||.+|.. +-.++. +..+.+-+|.
T Consensus 258 yySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsL----lG~~fg-----lP~VaFesPG 308 (425)
T KOG4540|consen 258 YYSAALDILGAVRRIYPDARIWLTGHSLGGAIASL----LGIRFG-----LPVVAFESPG 308 (425)
T ss_pred hhHHHHHHHHHHHHhCCCceEEEeccccchHHHHH----hccccC-----CceEEecCch
Confidence 44556677777788888889999999999999988 666664 4445555554
No 227
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.44 E-value=0.17 Score=42.68 Aligned_cols=51 Identities=22% Similarity=0.349 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcc
Q 016589 177 VVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
+..+..+++..++..+++.++.+-|||+||.+|.. +-.++. +..+.+-+|.
T Consensus 258 yySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsL----lG~~fg-----lP~VaFesPG 308 (425)
T COG5153 258 YYSAALDILGAVRRIYPDARIWLTGHSLGGAIASL----LGIRFG-----LPVVAFESPG 308 (425)
T ss_pred hhHHHHHHHHHHHHhCCCceEEEeccccchHHHHH----hccccC-----CceEEecCch
Confidence 44556677777788888889999999999999988 666664 4445555554
No 228
>PLN02847 triacylglycerol lipase
Probab=93.34 E-value=0.16 Score=47.77 Aligned_cols=36 Identities=25% Similarity=0.241 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhh
Q 016589 177 VVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKR 212 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~ 212 (386)
..+.+...+..+...+++-+++++|||+||.+|..+
T Consensus 233 I~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALL 268 (633)
T PLN02847 233 IAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALL 268 (633)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHH
Confidence 344444555555556666689999999999999883
No 229
>PLN02802 triacylglycerol lipase
Probab=93.24 E-value=0.29 Score=45.36 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhCCCC--CEEEEEechhhHHHHhhh
Q 016589 179 ADTGAFLEKIKLENPTV--PCFLFGHSTGGAVVLKRT 213 (386)
Q Consensus 179 ~d~~~~l~~l~~~~~~~--~i~lvGhS~Gg~~a~~~~ 213 (386)
+++.+-++.+...+++. .|++.|||+||.+|...+
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA 348 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVA 348 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHH
Confidence 44555555555555432 689999999999999833
No 230
>PLN02324 triacylglycerol lipase
Probab=93.00 E-value=0.21 Score=45.20 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHhCCCC--CEEEEEechhhHHHHh
Q 016589 176 HVVADTGAFLEKIKLENPTV--PCFLFGHSTGGAVVLK 211 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~~~~~--~i~lvGhS~Gg~~a~~ 211 (386)
...+.+.+-++.+...+++. .|.+.|||+||.+|+.
T Consensus 194 SareqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtL 231 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVL 231 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHH
Confidence 34455666666666666543 5999999999999998
No 231
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=92.27 E-value=0.2 Score=44.00 Aligned_cols=61 Identities=15% Similarity=0.353 Sum_probs=46.7
Q ss_pred ccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCCccHHHHHHHHHHHHh
Q 016589 312 FKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFELERDEVAQDIIVWLE 377 (386)
Q Consensus 312 ~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 377 (386)
..++..|-.++.|+.|.+++++.+.-.+..+++. +-+..+|+..|..... -+.+.+..|++
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~-kaLrmvPN~~H~~~n~----~i~esl~~fln 385 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPGE-KALRMVPNDPHNLINQ----FIKESLEPFLN 385 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCCc-eeeeeCCCCcchhhHH----HHHHHHHHHHH
Confidence 3567899999999999999999999999999873 5677889999976432 23344444544
No 232
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.27 E-value=1.5 Score=36.64 Aligned_cols=60 Identities=25% Similarity=0.314 Sum_probs=34.9
Q ss_pred CCeEEEeCCCCC-CC-CC-CCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHh
Q 016589 150 NFGVYAMDWIGH-GG-SD-GLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 150 G~~vi~~D~~G~-G~-S~-~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~ 211 (386)
|+.+..++||.. +- +. ....+..+..+-++.+.+.++.... ..++++++|+|+|+.++..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~--~~~~vvV~GySQGA~Va~~ 64 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA--AGGPVVVFGYSQGAVVASN 64 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc--CCCCEEEEEECHHHHHHHH
Confidence 678888888861 11 00 1111112344444444444443222 4457999999999999988
No 233
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.09 E-value=0.48 Score=42.33 Aligned_cols=43 Identities=21% Similarity=0.214 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCC
Q 016589 179 ADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYP 221 (386)
Q Consensus 179 ~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p 221 (386)
..+.+.++.+...+++-.+.+-|||+||.+|...+..++....
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~ 197 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGL 197 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCC
Confidence 4555556666666666679999999999999984443444443
No 234
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=91.84 E-value=11 Score=35.09 Aligned_cols=120 Identities=15% Similarity=0.114 Sum_probs=68.0
Q ss_pred eEeccCCceEEEEEecCCCCCCceEEEEECCCCCChhhHHH--HHHHHHhCCCe-EEEeCCCCCCCCCCCCCCCCChHHH
Q 016589 101 LFFGVKRNALFCRSWIPVSGELKGILIIIHGLNEHSGRYAQ--FARQLTSCNFG-VYAMDWIGHGGSDGLHGYVPSLDHV 177 (386)
Q Consensus 101 ~~~~~~g~~l~~~~~~p~~~~~~p~vv~lHG~~~~~~~~~~--~~~~L~~~G~~-vi~~D~~G~G~S~~~~~~~~~~~~~ 177 (386)
.+.+..+.++.|+.. |.+ -+.|..|+..|+-. .+.|.. +.+.| |.- .+.-|.|--|.+=-..... --...
T Consensus 269 r~~D~~reEi~yYFn-PGD-~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs~e-yE~~I 341 (511)
T TIGR03712 269 RLVDSKRQEFIYYFN-PGD-FKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGSDE-YEQGI 341 (511)
T ss_pred eEecCCCCeeEEecC-CcC-CCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCcHH-HHHHH
Confidence 344455555655543 322 33578899999765 444433 34444 333 4556777777652111110 12233
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccc
Q 016589 178 VADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALR 238 (386)
Q Consensus 178 ~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~ 238 (386)
.+-+.+.+++|+-.. ..+++-|-|||..-|+. +++... ..++|+.-|...
T Consensus 342 ~~~I~~~L~~LgF~~--~qLILSGlSMGTfgAlY----Yga~l~-----P~AIiVgKPL~N 391 (511)
T TIGR03712 342 INVIQEKLDYLGFDH--DQLILSGLSMGTFGALY----YGAKLS-----PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHhCCCH--HHeeeccccccchhhhh----hcccCC-----CceEEEcCcccc
Confidence 445555666665332 35999999999999999 877653 344666555543
No 235
>PLN02719 triacylglycerol lipase
Probab=91.81 E-value=0.3 Score=45.24 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhCCC-----CCEEEEEechhhHHHHh
Q 016589 177 VVADTGAFLEKIKLENPT-----VPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~-----~~i~lvGhS~Gg~~a~~ 211 (386)
..+++.+.++.+...+++ .+|.+.|||+||.+|+.
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtL 314 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVL 314 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHH
Confidence 345566666666655542 36999999999999998
No 236
>PLN02753 triacylglycerol lipase
Probab=91.60 E-value=0.35 Score=45.01 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHhCC-----CCCEEEEEechhhHHHHh
Q 016589 177 VVADTGAFLEKIKLENP-----TVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~-----~~~i~lvGhS~Gg~~a~~ 211 (386)
..+.+.+.++.+...++ ..+|.+.|||+||.+|+.
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtL 328 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAIL 328 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHH
Confidence 34555566666555442 347999999999999998
No 237
>PLN02761 lipase class 3 family protein
Probab=91.35 E-value=0.37 Score=44.83 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHhC------CCCCEEEEEechhhHHHHh
Q 016589 177 VVADTGAFLEKIKLEN------PTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~------~~~~i~lvGhS~Gg~~a~~ 211 (386)
..+++.+.|+.+...+ +..+|.+.|||+||.+|+.
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtL 310 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALV 310 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHH
Confidence 3445555666655544 1236999999999999998
No 238
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.41 E-value=0.73 Score=35.44 Aligned_cols=76 Identities=12% Similarity=0.076 Sum_probs=46.8
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCCCe-EEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCNFG-VYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGH 202 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGh 202 (386)
-.||+.-||+..+..+.++.. ..++. ++.+||+.... ++ |.. +.+ .+.+|.+
T Consensus 12 ~LIvyFaGwgtpps~v~HLil---peN~dl~lcYDY~dl~l---------df-----Dfs-Ay~---------hirlvAw 64 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLIL---PENHDLLLCYDYQDLNL---------DF-----DFS-AYR---------HIRLVAW 64 (214)
T ss_pred EEEEEEecCCCCHHHHhhccC---CCCCcEEEEeehhhcCc---------cc-----chh-hhh---------hhhhhhh
Confidence 489999999998877655442 23344 57788874431 11 111 111 2679999
Q ss_pred chhhHHHHhhhhhHhhcCCccccceeEEEEcCc
Q 016589 203 STGGAVVLKRTFVQAASYPHIEAMLEGIVLSAP 235 (386)
Q Consensus 203 S~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p 235 (386)
|||-.+|-+ +.... +++..+.+++
T Consensus 65 SMGVwvAeR----~lqg~-----~lksatAiNG 88 (214)
T COG2830 65 SMGVWVAER----VLQGI-----RLKSATAING 88 (214)
T ss_pred hHHHHHHHH----HHhhc-----cccceeeecC
Confidence 999999988 44333 3555555543
No 239
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=88.32 E-value=0.81 Score=41.02 Aligned_cols=86 Identities=16% Similarity=0.126 Sum_probs=46.6
Q ss_pred CCceEEEEECCCCC-ChhhHHHHHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCE
Q 016589 121 ELKGILIIIHGLNE-HSGRYAQFARQLTSC--NFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPC 197 (386)
Q Consensus 121 ~~~p~vv~lHG~~~-~~~~~~~~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i 197 (386)
++.-.+|+.||.-+ +...|...+....+. +..++...+.+.-..... +-..--...++++.+.+.... -.+|
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~-Gv~~lG~Rla~~~~e~~~~~s----i~kI 152 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFD-GVDVLGERLAEEVKETLYDYS----IEKI 152 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccc-cceeeecccHHHHhhhhhccc----ccee
Confidence 33458999999877 566677777666543 344444444432211111 000011122333333333222 2369
Q ss_pred EEEEechhhHHHHh
Q 016589 198 FLFGHSTGGAVVLK 211 (386)
Q Consensus 198 ~lvGhS~Gg~~a~~ 211 (386)
-.+|||+||.++..
T Consensus 153 SfvghSLGGLvar~ 166 (405)
T KOG4372|consen 153 SFVGHSLGGLVARY 166 (405)
T ss_pred eeeeeecCCeeeeE
Confidence 99999999998876
No 240
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=88.04 E-value=1.6 Score=38.75 Aligned_cols=61 Identities=13% Similarity=0.042 Sum_probs=48.3
Q ss_pred CccEEEEeeCCCCccChHHHHHHHHHhhcC----------------------C-CcEEEcCCCCCcccCCccHHHHHHHH
Q 016589 316 SVPFFVLHGTGDKVTDPLASQDLYNEAASR----------------------F-KDIKLYEGLLHDLLFELERDEVAQDI 372 (386)
Q Consensus 316 ~~P~lii~G~~D~~v~~~~~~~~~~~~~~~----------------------~-~~~~~~~~~gH~~~~~~~~~~~~~~i 372 (386)
.+++|+..|..|.+|+.-..+.+.+.+.-+ + -++..+-++||+.. . +|+...+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~-qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y-RPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-c-CHHHHHHHH
Confidence 479999999999999998888888776411 1 33455568999885 4 899999999
Q ss_pred HHHHhh
Q 016589 373 IVWLEK 378 (386)
Q Consensus 373 ~~fl~~ 378 (386)
.+|+..
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 999965
No 241
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.61 E-value=0.94 Score=42.62 Aligned_cols=65 Identities=18% Similarity=0.292 Sum_probs=50.3
Q ss_pred CCccEEEEeeCCCCccChHHHHHHHHHhhcC----------CCcEEEcCCCCCcccCC-ccHHHHHHHHHHHHhhh
Q 016589 315 VSVPFFVLHGTGDKVTDPLASQDLYNEAASR----------FKDIKLYEGLLHDLLFE-LERDEVAQDIIVWLEKK 379 (386)
Q Consensus 315 i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~gH~~~~~-~~~~~~~~~i~~fl~~~ 379 (386)
-.-.+++.||..|.++++..+.++++++... -.++..+||.+|..--. ..+-.....+.+|+++-
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 3568999999999999999988888876431 13567789999986543 34557889999999863
No 242
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=86.41 E-value=1.9 Score=38.37 Aligned_cols=45 Identities=24% Similarity=0.307 Sum_probs=29.6
Q ss_pred CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 193 PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 193 ~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
+.+|+.++|||+|+-+....+-.++.+ .. ...|+.+++++.+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~-~~-~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAER-KA-FGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhc-cc-cCeEeeEEEecCCCCC
Confidence 556899999999999988722222222 11 1247888888866544
No 243
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=86.18 E-value=9.1 Score=33.41 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=58.5
Q ss_pred CCceEEEEECCCCC----Ch-hhHHHHHHHHHh-CCCeEEEeCCCCCCCCCCC------------CCCCCChHHHHHHHH
Q 016589 121 ELKGILIIIHGLNE----HS-GRYAQFARQLTS-CNFGVYAMDWIGHGGSDGL------------HGYVPSLDHVVADTG 182 (386)
Q Consensus 121 ~~~p~vv~lHG~~~----~~-~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~------------~~~~~~~~~~~~d~~ 182 (386)
..+..|+|+-|... .. ..--.+...|.. .+-+++++=-+|.|.-.-. ....---....+.+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 45678999988532 22 223445556654 5778888877888743111 000001123456777
Q ss_pred HHHHHHHHhC-CCCCEEEEEechhhHHHHh
Q 016589 183 AFLEKIKLEN-PTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 183 ~~l~~l~~~~-~~~~i~lvGhS~Gg~~a~~ 211 (386)
.+...|...+ ++++|+++|+|-|+.++-.
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARV 138 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHH
Confidence 8888887776 6778999999999999877
No 244
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.40 E-value=2.6 Score=39.81 Aligned_cols=59 Identities=24% Similarity=0.403 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhC--CCCCEEEEEechhhHHHHhhhh-hHhhcCCccc---cceeEEEEcCcc
Q 016589 178 VADTGAFLEKIKLEN--PTVPCFLFGHSTGGAVVLKRTF-VQAASYPHIE---AMLEGIVLSAPA 236 (386)
Q Consensus 178 ~~d~~~~l~~l~~~~--~~~~i~lvGhS~Gg~~a~~~~~-~~a~~~p~~~---~~v~~lvl~~p~ 236 (386)
+.-...+++.+.... ++++|+.+||||||.++=.+.. .+....|+.. ....|+|+++.+
T Consensus 507 ~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 507 AARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 334445555554433 3568999999999988765111 0122345422 245677766544
No 245
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=82.41 E-value=16 Score=29.09 Aligned_cols=61 Identities=21% Similarity=0.256 Sum_probs=40.3
Q ss_pred CCceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCC--CCCCCCCCCCCCChHHHHHHHHHH
Q 016589 121 ELKGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIG--HGGSDGLHGYVPSLDHVVADTGAF 184 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G--~G~S~~~~~~~~~~~~~~~d~~~~ 184 (386)
..+|.+|++-|+.++..+ -..+.+.|.++|++++..|==. ||.+... -++-++-.+.+..+
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~dL---gFs~edR~eniRRv 84 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRDL---GFSREDRIENIRRV 84 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCCC---CCChHHHHHHHHHH
Confidence 346799999999988766 4567788889999999998321 4444321 12444545555443
No 246
>PF03283 PAE: Pectinacetylesterase
Probab=81.56 E-value=4.5 Score=36.57 Aligned_cols=44 Identities=18% Similarity=0.147 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHh-C-CCCCEEEEEechhhHHHHhhhhhHhhcCCc
Q 016589 179 ADTGAFLEKIKLE-N-PTVPCFLFGHSTGGAVVLKRTFVQAASYPH 222 (386)
Q Consensus 179 ~d~~~~l~~l~~~-~-~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~ 222 (386)
..+.++++++... . ..++++|.|.|.||.-++.-+-.+....|.
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~ 183 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPS 183 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhcc
Confidence 4566777777665 2 245799999999999988744444555664
No 247
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=81.15 E-value=12 Score=26.65 Aligned_cols=87 Identities=16% Similarity=0.075 Sum_probs=52.8
Q ss_pred hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhH
Q 016589 137 GRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQ 216 (386)
Q Consensus 137 ~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~ 216 (386)
..|..+.+.+...||-.=.+.++.+|.+....-.. ... +-=...++.+....|..+++++|.|--.-.-.. ..+
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~-~~~---~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY--~~i 84 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKS-GAE---EHKRDNIERILRDFPERKFILIGDSGQHDPEIY--AEI 84 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCccccccccC-Cch---hHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHH--HHH
Confidence 34666777777777877677777665442211000 111 223345556666677788999999966654332 226
Q ss_pred hhcCCccccceeEEEE
Q 016589 217 AASYPHIEAMLEGIVL 232 (386)
Q Consensus 217 a~~~p~~~~~v~~lvl 232 (386)
|.++|+ +|.++.+
T Consensus 85 a~~~P~---~i~ai~I 97 (100)
T PF09949_consen 85 ARRFPG---RILAIYI 97 (100)
T ss_pred HHHCCC---CEEEEEE
Confidence 788999 8877643
No 248
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=78.99 E-value=15 Score=31.84 Aligned_cols=88 Identities=14% Similarity=0.065 Sum_probs=48.5
Q ss_pred eEEEEECCCCCChhh------HHHHHHHH-HhCCCeEEEeCCCCCCCC--------CCCCCC---CCChHHHHHHHHHHH
Q 016589 124 GILIIIHGLNEHSGR------YAQFARQL-TSCNFGVYAMDWIGHGGS--------DGLHGY---VPSLDHVVADTGAFL 185 (386)
Q Consensus 124 p~vv~lHG~~~~~~~------~~~~~~~L-~~~G~~vi~~D~~G~G~S--------~~~~~~---~~~~~~~~~d~~~~l 185 (386)
..|||+=|.+.+... -..+.+.+ ...+-..+++=.+|-|.. ...... ...-....+.+...+
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 467788776654332 13344444 222334455555677751 110000 001123345566666
Q ss_pred HHHHHhC-CCCCEEEEEechhhHHHHh
Q 016589 186 EKIKLEN-PTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 186 ~~l~~~~-~~~~i~lvGhS~Gg~~a~~ 211 (386)
..+...+ +..+|.++|.|-|+..|-.
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~ 108 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARA 108 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHH
Confidence 6665544 5568999999999999988
No 249
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=78.05 E-value=20 Score=32.88 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=30.1
Q ss_pred EEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCC
Q 016589 126 LIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSD 165 (386)
Q Consensus 126 vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~ 165 (386)
|||+|... ...|+.+++.|+++|+.|.++-..+.+..+
T Consensus 2 il~~~~~~--p~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNF--PGQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCC--chhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 78898854 245899999999999999998777665543
No 250
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=77.05 E-value=28 Score=30.02 Aligned_cols=40 Identities=15% Similarity=0.253 Sum_probs=30.4
Q ss_pred CEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccccc
Q 016589 196 PCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 196 ~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
++++.|.|+|++-+.. .-...+++..+++|.+..+|....
T Consensus 110 kL~l~GeSLGa~g~~~----af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEA----AFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred eEEEeccCccccchhh----hhccHHHhhhhcceEEEeCCCCCC
Confidence 6999999999998877 333345555589999999887543
No 251
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=72.66 E-value=23 Score=33.09 Aligned_cols=116 Identities=23% Similarity=0.285 Sum_probs=60.9
Q ss_pred EEEEEecC-CCCCCceEEEEECCCCCCh-----hhHHHHHHHHHhC-CCeEEEeCCCC-------CCCCCCCCCCCCChH
Q 016589 110 LFCRSWIP-VSGELKGILIIIHGLNEHS-----GRYAQFARQLTSC-NFGVYAMDWIG-------HGGSDGLHGYVPSLD 175 (386)
Q Consensus 110 l~~~~~~p-~~~~~~p~vv~lHG~~~~~-----~~~~~~~~~L~~~-G~~vi~~D~~G-------~G~S~~~~~~~~~~~ 175 (386)
|+.-+|.| +++....++|.+-|.|.-+ ..|+ .+.|+.. .-.|+.++||- .+..+..++.. .+-
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNm-Gl~ 197 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNM-GLL 197 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCcc-chH
Confidence 56777888 3334455888888866322 2233 3445533 35567777771 12222223332 222
Q ss_pred HHHHHHHHHHHHHHHh---C--CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCccc
Q 016589 176 HVVADTGAFLEKIKLE---N--PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPAL 237 (386)
Q Consensus 176 ~~~~d~~~~l~~l~~~---~--~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~ 237 (386)
|-.-++++++++ . +..++.|+|.|.|+.-... =...|.-...++..|+-++..
T Consensus 198 ----DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~a-----HLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 198 ----DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVA-----HLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred ----HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhh-----eecCCCchhhHHHHHhhcCCC
Confidence 222334444433 1 2347999999999886654 333444223455566655443
No 252
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=71.57 E-value=35 Score=25.49 Aligned_cols=61 Identities=13% Similarity=0.208 Sum_probs=38.1
Q ss_pred CCceEEEEECCCCCChhhH--HHHHHHHHhCCCe---E----EEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 016589 121 ELKGILIIIHGLNEHSGRY--AQFARQLTSCNFG---V----YAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLE 191 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~--~~~~~~L~~~G~~---v----i~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~ 191 (386)
..+|.|+-+||++|....| +-+++.|-..|.. | ...|+| . ....+.+-+++...|......
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP--------~--~~~v~~Yk~~L~~~I~~~v~~ 119 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP--------H--NSNVDEYKEQLKSWIRGNVSR 119 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC--------C--chHHHHHHHHHHHHHHHHHHh
Confidence 4479999999999998887 3466666555432 2 222222 1 125666777777777665444
No 253
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=68.80 E-value=80 Score=28.97 Aligned_cols=95 Identities=16% Similarity=0.133 Sum_probs=55.9
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCC---------CCC-------------hHHHHHHH
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGY---------VPS-------------LDHVVADT 181 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~---------~~~-------------~~~~~~d~ 181 (386)
|.|+++--+-.-...+..+.+.+.+.|..|+.+|.-=.|........ ..+ .+.+.+-+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 35555554555555688888999999999999997544433322100 001 12223333
Q ss_pred HHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCc
Q 016589 182 GAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPH 222 (386)
Q Consensus 182 ~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~ 222 (386)
..++..+..+..-.-++-+|-|.|..++.. ....-|=
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~----aMr~LPi 118 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATA----AMRALPI 118 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHH----HHHhCCC
Confidence 444444443332234888999999999988 5544554
No 254
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=67.19 E-value=10 Score=34.54 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=41.2
Q ss_pred HHhhccCCCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCCCcccCC----ccHHHHHHHHHHHHh
Q 016589 308 LKRNFKSVSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLLHDLLFE----LERDEVAQDIIVWLE 377 (386)
Q Consensus 308 ~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~~i~~fl~ 377 (386)
+...++.-.-.+|+|+|++|++.-.. +.-.-.+.+..+.+.||++|..-.. .+..++...|.+|-.
T Consensus 343 I~~Wvr~~~~rmlFVYG~nDPW~A~~----f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 343 IDRWVRNNGPRMLFVYGENDPWSAEP----FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHHHHhCCCeEEEEeCCCCCcccCc----cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 34444555568999999999875322 1111122446777789999985443 345666677777754
No 255
>PRK12467 peptide synthase; Provisional
Probab=66.72 E-value=37 Score=41.62 Aligned_cols=82 Identities=20% Similarity=0.127 Sum_probs=57.1
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGH 202 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGh 202 (386)
.+.+++.|...++...+..+...|.. +..++.+..++.-. ++.. ..+++..+....+.+.+... ..+..+.|+
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~-d~~~--~~~~~~~~~~y~~~~~~~~~---~~p~~l~g~ 3764 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLD-DGWQ--DTSLQAMAVQYADYILWQQA---KGPYGLLGW 3764 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCC-CCcEEEEecccccc-ccCC--ccchHHHHHHHHHHHHHhcc---CCCeeeeee
Confidence 46799999988887778888887744 57888887765432 2211 12566666666666655443 346899999
Q ss_pred chhhHHHHh
Q 016589 203 STGGAVVLK 211 (386)
Q Consensus 203 S~Gg~~a~~ 211 (386)
|+||.++..
T Consensus 3765 s~g~~~a~~ 3773 (3956)
T PRK12467 3765 SLGGTLARL 3773 (3956)
T ss_pred ecchHHHHH
Confidence 999999988
No 256
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=60.73 E-value=15 Score=29.41 Aligned_cols=29 Identities=21% Similarity=0.414 Sum_probs=14.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCEEEEE
Q 016589 173 SLDHVVADTGAFLEKIKLENPTVPCFLFG 201 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~~~~~~i~lvG 201 (386)
+.+.+.+-+..+++.++...|..||+++-
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~ 100 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVS 100 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 33444555555555555555555555444
No 257
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=60.01 E-value=59 Score=26.74 Aligned_cols=45 Identities=24% Similarity=0.387 Sum_probs=29.7
Q ss_pred CCCCCCceEEEEECCCCCChhh-HHHHHHHHHhCCC-eEEEeCCCCC
Q 016589 117 PVSGELKGILIIIHGLNEHSGR-YAQFARQLTSCNF-GVYAMDWIGH 161 (386)
Q Consensus 117 p~~~~~~p~vv~lHG~~~~~~~-~~~~~~~L~~~G~-~vi~~D~~G~ 161 (386)
|+-.+..-+|++.||...++.. |.-+-..|.+.|| .|++...-|+
T Consensus 132 ppl~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y 178 (265)
T COG4822 132 PPLNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY 178 (265)
T ss_pred CCcCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 4334556799999999877665 4444455667788 6666665444
No 258
>PRK02399 hypothetical protein; Provisional
Probab=56.49 E-value=1.6e+02 Score=27.04 Aligned_cols=102 Identities=14% Similarity=0.150 Sum_probs=55.3
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC---------CCCC-------------hHHHHHHH
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHG---------YVPS-------------LDHVVADT 181 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---------~~~~-------------~~~~~~d~ 181 (386)
+.|+++--+-.-...+..+.+.+.+.|..|+.+|.-..|....+.. ...+ .+.+.+-.
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 3444443344444557777888888899999999844432211100 0001 11222333
Q ss_pred HHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEE
Q 016589 182 GAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVL 232 (386)
Q Consensus 182 ~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl 232 (386)
..+++.+..+..-.-++-+|-|.|..++.. ....-|= -+.+++.
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~----aMr~LPi---G~PKlmV 127 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATP----AMRALPI---GVPKLMV 127 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHH----HHHhCCC---CCCeEEE
Confidence 334443333332334888999999999988 5544554 3444443
No 259
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=53.46 E-value=15 Score=30.51 Aligned_cols=29 Identities=14% Similarity=0.121 Sum_probs=24.3
Q ss_pred EEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCC
Q 016589 125 ILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDW 158 (386)
Q Consensus 125 ~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~ 158 (386)
.=++++|.|.+.+ +..|+++||.|+.+|+
T Consensus 39 ~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 39 GRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp EEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 4578899887766 6788899999999997
No 260
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=53.32 E-value=15 Score=30.74 Aligned_cols=28 Identities=11% Similarity=-0.014 Sum_probs=22.6
Q ss_pred EEEECCCCCChhhHHHHHHHHHhCCCeEEEeCC
Q 016589 126 LIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDW 158 (386)
Q Consensus 126 vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~ 158 (386)
=||++|.|.+.+ +..|+++||.|+.+|+
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEec
Confidence 567777776655 6788999999999998
No 261
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=52.52 E-value=35 Score=25.50 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=23.3
Q ss_pred CceEEEEECCCCC-------------ChhhH-----------HHHHHHHHhCCCeEEEe
Q 016589 122 LKGILIIIHGLNE-------------HSGRY-----------AQFARQLTSCNFGVYAM 156 (386)
Q Consensus 122 ~~p~vv~lHG~~~-------------~~~~~-----------~~~~~~L~~~G~~vi~~ 156 (386)
....+||+||.-. +.+.| ...+..|.+.|++|+++
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 3568999999431 22234 23567888889998765
No 262
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=52.44 E-value=59 Score=26.67 Aligned_cols=63 Identities=16% Similarity=0.041 Sum_probs=40.6
Q ss_pred HHHHHHhCCC-eEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEech----hhHHHHhhhhhH
Q 016589 142 FARQLTSCNF-GVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHST----GGAVVLKRTFVQ 216 (386)
Q Consensus 142 ~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~----Gg~~a~~~~~~~ 216 (386)
..+.+...|. .|+..|-+.... ++.+.++.-+.++++... + .++++|+|. |..++-+ +
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~~--------~~~e~~a~al~~~i~~~~---p--~lVL~~~t~~~~~grdlapr----l 130 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFAG--------ADTLATAKALAAAIKKIG---V--DLILTGKQSIDGDTGQVGPL----L 130 (202)
T ss_pred HHHHHHHcCCCEEEEEecccccC--------CChHHHHHHHHHHHHHhC---C--CEEEEcCCcccCCcCcHHHH----H
Confidence 3444555666 678777654432 356666777776665533 1 489999998 7788888 6
Q ss_pred hhcCC
Q 016589 217 AASYP 221 (386)
Q Consensus 217 a~~~p 221 (386)
|++..
T Consensus 131 AarLg 135 (202)
T cd01714 131 AELLG 135 (202)
T ss_pred HHHhC
Confidence 66543
No 263
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=52.04 E-value=59 Score=26.60 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=29.5
Q ss_pred CceEEEEECCCCCCh---hhHHHHHHHHHhCCCeEEEeCCCCCCC
Q 016589 122 LKGILIIIHGLNEHS---GRYAQFARQLTSCNFGVYAMDWIGHGG 163 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~G~G~ 163 (386)
..++++++||..... ..-..+.+.|.+.|..+...-+++.|.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 357999999976543 334567888888888777777776554
No 264
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=51.02 E-value=30 Score=27.00 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=27.5
Q ss_pred ceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCC
Q 016589 123 KGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDW 158 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~ 158 (386)
+|.+|++-|..++... -..+.+.|.+.|+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 3689999999988765 35677788888999999983
No 265
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=47.63 E-value=78 Score=22.74 Aligned_cols=73 Identities=21% Similarity=0.196 Sum_probs=42.9
Q ss_pred CceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEE
Q 016589 122 LKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFG 201 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvG 201 (386)
..|+|+|.--+.........+...+ .-.+.|+-+|-..+| .++.+.+..+.....-..+++-|
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~-~v~~~vvELD~~~~g----------------~eiq~~l~~~tg~~tvP~vFI~G 75 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDL-GVNPKVVELDEDEDG----------------SEIQKALKKLTGQRTVPNVFIGG 75 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhC-CCCCEEEEccCCCCc----------------HHHHHHHHHhcCCCCCCEEEECC
Confidence 3578888774443333333333333 234778888865433 24445555544333333588889
Q ss_pred echhhHHHHh
Q 016589 202 HSTGGAVVLK 211 (386)
Q Consensus 202 hS~Gg~~a~~ 211 (386)
.+.||.--+.
T Consensus 76 k~iGG~~dl~ 85 (104)
T KOG1752|consen 76 KFIGGASDLM 85 (104)
T ss_pred EEEcCHHHHH
Confidence 9999998777
No 266
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=47.21 E-value=49 Score=27.29 Aligned_cols=57 Identities=26% Similarity=0.281 Sum_probs=36.5
Q ss_pred ceEEEEECCCCCChhh---HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016589 123 KGILIIIHGLNEHSGR---YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEK 187 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~---~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~ 187 (386)
+.+|+++||-....-- .....+.|.+.|.+|-...++|-|.+ ...+...|+.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~--------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE--------ISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC--------CCHHHHHHHHHHHhh
Confidence 4579999998765433 45677888888888888888876654 234556677766654
No 267
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=47.05 E-value=26 Score=30.27 Aligned_cols=34 Identities=6% Similarity=0.264 Sum_probs=28.3
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeC
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMD 157 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D 157 (386)
..||++|....+......+++.|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3688999876677778889999999999998875
No 268
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=45.91 E-value=20 Score=28.99 Aligned_cols=34 Identities=12% Similarity=0.321 Sum_probs=25.1
Q ss_pred eEEEEECCC---CCChhhHHHHHHHHHhCCCeEEEeC
Q 016589 124 GILIIIHGL---NEHSGRYAQFARQLTSCNFGVYAMD 157 (386)
Q Consensus 124 p~vv~lHG~---~~~~~~~~~~~~~L~~~G~~vi~~D 157 (386)
..||++|.. ..+......+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 358999942 2334457788999999999998774
No 269
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=44.92 E-value=1.7e+02 Score=25.03 Aligned_cols=39 Identities=15% Similarity=0.197 Sum_probs=25.4
Q ss_pred CCceEEEEECCCCCChhh-HHHHHHHHHhCCCe-EEEeCCC
Q 016589 121 ELKGILIIIHGLNEHSGR-YAQFARQLTSCNFG-VYAMDWI 159 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~-~~~~~~~L~~~G~~-vi~~D~~ 159 (386)
+..|.|++++-.++.... .+.+.+.|.+.|+. |-.++.+
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 345788999876655433 45566777778884 5566654
No 270
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=43.94 E-value=84 Score=29.73 Aligned_cols=46 Identities=20% Similarity=0.347 Sum_probs=29.0
Q ss_pred CCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccC
Q 016589 193 PTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVE 240 (386)
Q Consensus 193 ~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~ 240 (386)
+.+||.++|+|.|+-+...-+. -.++..+ ...|..+++.+.+....
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~-~Lakkke-~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLL-ELAKKKE-VGIIENVILFGAPVPTK 490 (633)
T ss_pred CCCceeEeeeccchHHHHHHHH-HHhhccc-ccceeeeeeccCCccCC
Confidence 5678999999999999886110 1112111 12577788887765543
No 271
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=43.80 E-value=1e+02 Score=25.54 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=27.8
Q ss_pred ceEEEEECCCCCChhh--H-HHHHHHHHhCCCeEEEeCC
Q 016589 123 KGILIIIHGLNEHSGR--Y-AQFARQLTSCNFGVYAMDW 158 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~--~-~~~~~~L~~~G~~vi~~D~ 158 (386)
++.|.||+-.+.+... | ....+.|.+.|+.+..++.
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 5689999988776654 3 4566788889999888876
No 272
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=42.16 E-value=1.5 Score=38.12 Aligned_cols=88 Identities=25% Similarity=0.175 Sum_probs=51.2
Q ss_pred ceEEEEECCCCCChhhHHHH-HHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEE
Q 016589 123 KGILIIIHGLNEHSGRYAQF-ARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFG 201 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~-~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvG 201 (386)
...++..||...+......+ ...+...++.++..|+++++.+..+.... ....-..++..++..........++.++|
T Consensus 88 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 166 (299)
T COG1073 88 GESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILA-GLSLGGPSAGALLAWGPTRLDASRIVVWG 166 (299)
T ss_pred cccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEE-EEEeeccchHHHhhcchhHHHhhccccee
Confidence 45778888875555443333 34444667999999999999886443211 11111122222222221111122589999
Q ss_pred echhhHHHHh
Q 016589 202 HSTGGAVVLK 211 (386)
Q Consensus 202 hS~Gg~~a~~ 211 (386)
.|+||..++.
T Consensus 167 ~s~g~~~~~~ 176 (299)
T COG1073 167 ESLGGALALL 176 (299)
T ss_pred eccCceeecc
Confidence 9999999988
No 273
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=41.94 E-value=1.5e+02 Score=23.98 Aligned_cols=53 Identities=11% Similarity=0.127 Sum_probs=39.4
Q ss_pred CCceEEEEEecCCCCCCc-eEEEEECCCCCChhhHHHHHHHHHhCCCeE------EEeCC
Q 016589 106 KRNALFCRSWIPVSGELK-GILIIIHGLNEHSGRYAQFARQLTSCNFGV------YAMDW 158 (386)
Q Consensus 106 ~g~~l~~~~~~p~~~~~~-p~vv~lHG~~~~~~~~~~~~~~L~~~G~~v------i~~D~ 158 (386)
+|..+.|..|...+-.++ -+|-++-|+....+...++...|.++|+.+ +.+++
T Consensus 43 ~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN~ 102 (184)
T TIGR01626 43 SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIINA 102 (184)
T ss_pred cCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEEC
Confidence 456788888866544334 355566788888888899999999889888 77764
No 274
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=41.84 E-value=34 Score=28.61 Aligned_cols=34 Identities=12% Similarity=0.468 Sum_probs=27.1
Q ss_pred eEEEEECCC-CCChhhHHHHHHHHHhCCCeEEEeC
Q 016589 124 GILIIIHGL-NEHSGRYAQFARQLTSCNFGVYAMD 157 (386)
Q Consensus 124 p~vv~lHG~-~~~~~~~~~~~~~L~~~G~~vi~~D 157 (386)
..||++|.. ..+......+++.|.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 468999974 4455668889999999999998875
No 275
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=41.74 E-value=28 Score=29.91 Aligned_cols=31 Identities=16% Similarity=0.445 Sum_probs=25.7
Q ss_pred CceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCC
Q 016589 122 LKGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 159 (386)
.-|.|+|.-|.++. .+.|+..||.|+..||-
T Consensus 251 ~vPmi~fakG~g~~-------Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 251 PVPMILFAKGSGGA-------LEELAQTGYDVVGLDWT 281 (359)
T ss_pred CCceEEEEcCcchH-------HHHHHhcCCcEEeeccc
Confidence 35899999987753 67888999999999985
No 276
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=41.37 E-value=1.9e+02 Score=24.46 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=45.8
Q ss_pred ceEEEEECCCCCC--hhh-HHHHHHHHHhCCCeEEEeCCCCCC-----CCCC---CCCCCCChHHHH--HHHHHHHHHHH
Q 016589 123 KGILIIIHGLNEH--SGR-YAQFARQLTSCNFGVYAMDWIGHG-----GSDG---LHGYVPSLDHVV--ADTGAFLEKIK 189 (386)
Q Consensus 123 ~p~vv~lHG~~~~--~~~-~~~~~~~L~~~G~~vi~~D~~G~G-----~S~~---~~~~~~~~~~~~--~d~~~~l~~l~ 189 (386)
.|.|+||+=.... ... .+.+.+.+.+.|+.|..++...-- ..+. .-+....+-... ..+.+.++...
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~ 110 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAV 110 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHH
Confidence 4689999987633 333 344667777889999888865210 0000 001100111111 12333343322
Q ss_pred HhCCCCCEEEEEechhhHHHHh
Q 016589 190 LENPTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 190 ~~~~~~~i~lvGhS~Gg~~a~~ 211 (386)
.+. ..++|.|.|+.++..
T Consensus 111 ~~G----~~~~G~SAGAii~~~ 128 (233)
T PRK05282 111 KNG----TPYIGWSAGANVAGP 128 (233)
T ss_pred HCC----CEEEEECHHHHhhhc
Confidence 222 689999999988766
No 277
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=40.62 E-value=1.3e+02 Score=24.63 Aligned_cols=25 Identities=24% Similarity=0.062 Sum_probs=20.5
Q ss_pred ChhhHHHHHHHHHhCCCeEEEeCCC
Q 016589 135 HSGRYAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 135 ~~~~~~~~~~~L~~~G~~vi~~D~~ 159 (386)
++..=+.++..|+++|++|++.|+.
T Consensus 23 ~sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 23 SSGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred CchHHHHHHHHHHhcCcEEEEeecc
Confidence 3445577899999999999999875
No 278
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=37.62 E-value=44 Score=28.72 Aligned_cols=37 Identities=5% Similarity=0.174 Sum_probs=30.3
Q ss_pred ceEEEEECCCCCChh--hHHHHHHHHHhCCCeEEEeCCC
Q 016589 123 KGILIIIHGLNEHSG--RYAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~ 159 (386)
.|+||++.|+.++.. .-+.+.+.|-.+|++|.++.-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 589999999876654 4678888888889999999655
No 279
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=36.38 E-value=1.7e+02 Score=21.28 Aligned_cols=72 Identities=15% Similarity=0.178 Sum_probs=47.8
Q ss_pred EEEEECCCCCChhhHHHHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEec
Q 016589 125 ILIIIHGLNEHSGRYAQFARQLTSC-NFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHS 203 (386)
Q Consensus 125 ~vv~lHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS 203 (386)
.||.-|| .-+......++.+... -..+.++++.-. .+.++..+.+.+.++.+.. .+.+.++..=
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~~----------~~~~~~~~~l~~~i~~~~~---~~~vlil~Dl 66 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYPD----------ESIEDFEEKLEEAIEELDE---GDGVLILTDL 66 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETTT----------SCHHHHHHHHHHHHHHCCT---TSEEEEEESS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcCC----------CCHHHHHHHHHHHHHhccC---CCcEEEEeeC
Confidence 6888899 4456677777777755 346777776411 1667777777777755432 2357788777
Q ss_pred hhhHHHHh
Q 016589 204 TGGAVVLK 211 (386)
Q Consensus 204 ~Gg~~a~~ 211 (386)
.||.....
T Consensus 67 ~ggsp~n~ 74 (116)
T PF03610_consen 67 GGGSPFNE 74 (116)
T ss_dssp TTSHHHHH
T ss_pred CCCccchH
Confidence 77776555
No 280
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=36.00 E-value=48 Score=27.85 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=30.3
Q ss_pred ceEEEEECCCCCChh--hHHHHHHHHHhCCCeEEEeCCC
Q 016589 123 KGILIIIHGLNEHSG--RYAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~ 159 (386)
.|+||++.|+.++.. .-+.+...|-.+|+.|.++.-|
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 579999999876654 4678888888889999998765
No 281
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=35.83 E-value=28 Score=33.44 Aligned_cols=47 Identities=15% Similarity=0.088 Sum_probs=32.5
Q ss_pred CC-CccEEEEeeCCCCccChHHHHHHHHHhh----cC--CCcEEEcCCCCCccc
Q 016589 314 SV-SVPFFVLHGTGDKVTDPLASQDLYNEAA----SR--FKDIKLYEGLLHDLL 360 (386)
Q Consensus 314 ~i-~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~--~~~~~~~~~~gH~~~ 360 (386)
++ ..|.+++||..|.++|..+.-+-+-.+. +. ...++.++++-|+-.
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDA 605 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechh
Confidence 44 6799999999999999776555444332 11 245667788888743
No 282
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=35.56 E-value=46 Score=19.68 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=24.6
Q ss_pred hCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 016589 148 SCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEK 187 (386)
Q Consensus 148 ~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~ 187 (386)
+.+|.+..+|+||.- +.+ .+.++..+.+.+++..
T Consensus 11 ~~~y~~~~pdlpg~~-t~G-----~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCF-TQG-----DTLEEALENAKEALEL 44 (48)
T ss_dssp SSSEEEEETTCCTCE-EEE-----SSHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChh-hcC-----CCHHHHHHHHHHHHHH
Confidence 357999999999875 222 2778888888777764
No 283
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=35.51 E-value=49 Score=27.56 Aligned_cols=16 Identities=13% Similarity=0.082 Sum_probs=14.0
Q ss_pred HHHHHhCCCeEEEeCC
Q 016589 143 ARQLTSCNFGVYAMDW 158 (386)
Q Consensus 143 ~~~L~~~G~~vi~~D~ 158 (386)
+..|+++||.|+++|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 5677889999999997
No 284
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=35.48 E-value=1.3e+02 Score=29.72 Aligned_cols=64 Identities=19% Similarity=0.181 Sum_probs=40.4
Q ss_pred CCceEEEEECCCCCCh---hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 016589 121 ELKGILIIIHGLNEHS---GRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKL 190 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~ 190 (386)
.-+.+++++||..... ..-..+...|..+|..|-..-+|+-|.+-. ..+....-+..+++++..
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~------~~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFS------RPENRVKVLKEILDWFKR 615 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCC------CchhHHHHHHHHHHHHHH
Confidence 3457899999977543 334567888888898887777776554422 123334455555555543
No 285
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=34.53 E-value=3.1e+02 Score=23.79 Aligned_cols=76 Identities=13% Similarity=0.267 Sum_probs=42.8
Q ss_pred HHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhh
Q 016589 140 AQFARQLTS-CNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAA 218 (386)
Q Consensus 140 ~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~ 218 (386)
....+.+.+ .++.++.+|.+|....+ ....+.+.++++.. .+...+.++.-++++.-+.. .+.
T Consensus 143 ~~~l~~l~~~~~~D~ViIDt~Gr~~~~---------~~~l~el~~~~~~~---~~~~~~LVl~a~~~~~d~~~----~~~ 206 (270)
T PRK06731 143 TRALTYFKEEARVDYILIDTAGKNYRA---------SETVEEMIETMGQV---EPDYICLTLSASMKSKDMIE----IIT 206 (270)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCcCC---------HHHHHHHHHHHhhh---CCCeEEEEEcCccCHHHHHH----HHH
Confidence 344455543 47999999999875321 22344444444432 22222334555677777766 566
Q ss_pred cCCccccceeEEEEc
Q 016589 219 SYPHIEAMLEGIVLS 233 (386)
Q Consensus 219 ~~p~~~~~v~~lvl~ 233 (386)
.+... .++++|+.
T Consensus 207 ~f~~~--~~~~~I~T 219 (270)
T PRK06731 207 NFKDI--HIDGIVFT 219 (270)
T ss_pred HhCCC--CCCEEEEE
Confidence 65542 67888873
No 286
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=34.24 E-value=66 Score=23.35 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=22.6
Q ss_pred EEEECCCCCChhhHHHHHHHHHhC-CCeEEEeCC
Q 016589 126 LIIIHGLNEHSGRYAQFARQLTSC-NFGVYAMDW 158 (386)
Q Consensus 126 vv~lHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~ 158 (386)
+|++.|.+++..+ .+++.|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 5788888877764 345666654 899998887
No 287
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=34.05 E-value=92 Score=26.71 Aligned_cols=88 Identities=16% Similarity=0.230 Sum_probs=45.0
Q ss_pred HHHHHHHhCCCeEEEeCCCCC-CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhc
Q 016589 141 QFARQLTSCNFGVYAMDWIGH-GGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAAS 219 (386)
Q Consensus 141 ~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~ 219 (386)
..++.+++.|-.|+++.+-.. |.+.+... ..++++.++.+.++.+......+ .++++.| ||-++.--=.++..+
T Consensus 161 e~A~~M~~AGaDiiv~H~GlT~gG~~Ga~~-~~sl~~a~~~~~~i~~aa~~v~~--dii~l~h--GGPI~~p~D~~~~l~ 235 (268)
T PF09370_consen 161 EQARAMAEAGADIIVAHMGLTTGGSIGAKT-ALSLEEAAERIQEIFDAARAVNP--DIIVLCH--GGPIATPEDAQYVLR 235 (268)
T ss_dssp HHHHHHHHHT-SEEEEE-SS-----------S--HHHHHHHHHHHHHHHHCC-T--T-EEEEE--CTTB-SHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCccCCCCcCccc-cCCHHHHHHHHHHHHHHHHHhCC--CeEEEEe--CCCCCCHHHHHHHHh
Confidence 356777788889998886321 22222221 23888888888888887766554 3788888 887763200002222
Q ss_pred CCccccceeEEEEcCcc
Q 016589 220 YPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 220 ~p~~~~~v~~lvl~~p~ 236 (386)
+-. .+.|.+--+..
T Consensus 236 ~t~---~~~Gf~G~Ss~ 249 (268)
T PF09370_consen 236 NTK---GIHGFIGASSM 249 (268)
T ss_dssp H-T---TEEEEEESTTT
T ss_pred cCC---CCCEEecccch
Confidence 222 36777765544
No 288
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=33.51 E-value=1.6e+02 Score=26.06 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=21.7
Q ss_pred CCceEEEEECCCCCChhhHH--HHHHHHHhCC
Q 016589 121 ELKGILIIIHGLNEHSGRYA--QFARQLTSCN 150 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~--~~~~~L~~~G 150 (386)
..+|.++=+||++|+...|- -+++.+-..|
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 55899999999999988763 3455554444
No 289
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=33.43 E-value=51 Score=27.33 Aligned_cols=16 Identities=13% Similarity=0.100 Sum_probs=14.2
Q ss_pred HHHHHhCCCeEEEeCC
Q 016589 143 ARQLTSCNFGVYAMDW 158 (386)
Q Consensus 143 ~~~L~~~G~~vi~~D~ 158 (386)
+..|+++|+.|+++|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 5678899999999997
No 290
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=33.34 E-value=1.5e+02 Score=21.90 Aligned_cols=15 Identities=13% Similarity=0.251 Sum_probs=11.6
Q ss_pred HHHHHHhCCCeEEEe
Q 016589 142 FARQLTSCNFGVYAM 156 (386)
Q Consensus 142 ~~~~L~~~G~~vi~~ 156 (386)
....|.+.|+.|+.+
T Consensus 99 ~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHCcCEEEEE
Confidence 345777889999876
No 291
>PRK11460 putative hydrolase; Provisional
Probab=33.29 E-value=2.1e+02 Score=23.89 Aligned_cols=42 Identities=17% Similarity=-0.035 Sum_probs=28.5
Q ss_pred CceEEEEECCCCCChhh---HHHHHHHHHhCCCeEEEeCCCCCCC
Q 016589 122 LKGILIIIHGLNEHSGR---YAQFARQLTSCNFGVYAMDWIGHGG 163 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~---~~~~~~~L~~~G~~vi~~D~~G~G~ 163 (386)
..++|+++||-....-. -..+.+.|.+.|..+-..-++|.|.
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH 191 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGH 191 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCC
Confidence 35689999998765433 3456777877787776666665543
No 292
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=32.81 E-value=61 Score=29.87 Aligned_cols=64 Identities=13% Similarity=0.119 Sum_probs=35.0
Q ss_pred CCccEEEEeeCCCCccChHHHHHHHHHhhcCCCcEEE--cCCCCCccc--CCccHHHHHHHHHHHHhhh
Q 016589 315 VSVPFFVLHGTGDKVTDPLASQDLYNEAASRFKDIKL--YEGLLHDLL--FELERDEVAQDIIVWLEKK 379 (386)
Q Consensus 315 i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~--~~~~gH~~~--~~~~~~~~~~~i~~fl~~~ 379 (386)
-+.|++++.|.-|.+-+ +....+.+.+...+.-..+ .||.|+... +.++.+...+.+++|+...
T Consensus 188 ~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp S-EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcC
Confidence 36799999999998743 3233333333333344443 578777532 2336678899999999764
No 293
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=32.21 E-value=89 Score=20.97 Aligned_cols=42 Identities=19% Similarity=0.244 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHhC---CCCCEEEEEechhhHHHHhhhhhHhhcC
Q 016589 175 DHVVADTGAFLEKIKLEN---PTVPCFLFGHSTGGAVVLKRTFVQAASY 220 (386)
Q Consensus 175 ~~~~~d~~~~l~~l~~~~---~~~~i~lvGhS~Gg~~a~~~~~~~a~~~ 220 (386)
.-..+.+.+.+++++... +.+++.++|-|.|=.+|.+ .++.+
T Consensus 17 ~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsR----Ia~aF 61 (78)
T PF12242_consen 17 VGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASR----IAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHH----HHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHH----HHHHh
Confidence 344566666777766543 3357999999999999987 66554
No 294
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=31.30 E-value=4.3e+02 Score=24.49 Aligned_cols=59 Identities=14% Similarity=0.112 Sum_probs=32.8
Q ss_pred HHHHHHHHHhCCCeEEEeCCCCC---CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Q 016589 139 YAQFARQLTSCNFGVYAMDWIGH---GGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGH 202 (386)
Q Consensus 139 ~~~~~~~L~~~G~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGh 202 (386)
.......|.+.|+.|+-++. |+ |+.. .+...+.++.+..+...+.. ....+.++.+-|-
T Consensus 135 ~~~Nl~~L~~~G~~ii~P~~-g~la~~~~g--~gr~~~~~~I~~~~~~~~~~--~~l~gk~vlITgG 196 (399)
T PRK05579 135 TQRNLATLRSRGVEIIGPAS-GRLACGDVG--PGRMAEPEEIVAAAERALSP--KDLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHHHHCCCEEECCCC-ccccCCCcC--CCCCCCHHHHHHHHHHHhhh--cccCCCEEEEeCC
Confidence 56677788888999886653 32 2221 12233666666655555532 1123445677776
No 295
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=31.24 E-value=3.6e+02 Score=25.27 Aligned_cols=76 Identities=16% Similarity=0.152 Sum_probs=40.8
Q ss_pred HHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhH-HHHhhhhhHhhcC
Q 016589 142 FARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGA-VVLKRTFVQAASY 220 (386)
Q Consensus 142 ~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~-~a~~~~~~~a~~~ 220 (386)
+.+.+.+.++.++.+|-+|+... + ...++.+..+++......+. .++++=-+..+. -... .+..+
T Consensus 291 l~~~l~~~~~D~VLIDTaGr~~r--------d-~~~l~eL~~~~~~~~~~~~~-e~~LVLsAt~~~~~~~~----~~~~f 356 (432)
T PRK12724 291 FKETLARDGSELILIDTAGYSHR--------N-LEQLERMQSFYSCFGEKDSV-ENLLVLSSTSSYHHTLT----VLKAY 356 (432)
T ss_pred HHHHHHhCCCCEEEEeCCCCCcc--------C-HHHHHHHHHHHHhhcCCCCC-eEEEEEeCCCCHHHHHH----HHHHh
Confidence 44455556899999999766422 1 23355555555544322222 345555544444 4444 34444
Q ss_pred CccccceeEEEEc
Q 016589 221 PHIEAMLEGIVLS 233 (386)
Q Consensus 221 p~~~~~v~~lvl~ 233 (386)
... .+.++|+.
T Consensus 357 ~~~--~~~glIlT 367 (432)
T PRK12724 357 ESL--NYRRILLT 367 (432)
T ss_pred cCC--CCCEEEEE
Confidence 332 47778773
No 296
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=31.16 E-value=3.6e+02 Score=23.61 Aligned_cols=89 Identities=12% Similarity=0.013 Sum_probs=47.0
Q ss_pred ChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhh
Q 016589 135 HSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTF 214 (386)
Q Consensus 135 ~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~ 214 (386)
+...++.+++.+.+.|.+-+.+. | |.+... ..+.++..+-+..+++....+. -+++|-+..-.-++.
T Consensus 24 D~~~l~~li~~l~~~Gv~gi~v~----G-stGE~~-~Lt~eEr~~v~~~~~~~~~g~~----pvi~gv~~~t~~ai~--- 90 (296)
T TIGR03249 24 DEAAYRENIEWLLGYGLEALFAA----G-GTGEFF-SLTPAEYEQVVEIAVSTAKGKV----PVYTGVGGNTSDAIE--- 90 (296)
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC----C-CCcCcc-cCCHHHHHHHHHHHHHHhCCCC----cEEEecCccHHHHHH---
Confidence 44557888999999898777653 2 222111 1255655555555555543322 345555422333333
Q ss_pred hHhhcCCccccceeEEEEcCccccc
Q 016589 215 VQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 215 ~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
.+....+. .+++++++.|.+..
T Consensus 91 -~a~~a~~~--Gadav~~~pP~y~~ 112 (296)
T TIGR03249 91 -IARLAEKA--GADGYLLLPPYLIN 112 (296)
T ss_pred -HHHHHHHh--CCCEEEECCCCCCC
Confidence 23222221 36778777776644
No 297
>PRK00889 adenylylsulfate kinase; Provisional
Probab=29.34 E-value=1.2e+02 Score=23.90 Aligned_cols=36 Identities=19% Similarity=0.354 Sum_probs=25.9
Q ss_pred ceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCC
Q 016589 123 KGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDW 158 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~ 158 (386)
.+.++.+.|.+++... -..++..|...|..+..+|-
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 3568888898887765 35577777777877877753
No 298
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=29.22 E-value=28 Score=27.21 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=22.2
Q ss_pred ChHHHHHHHHHHHHHHHHhC----CCCCEEEEEechhhH
Q 016589 173 SLDHVVADTGAFLEKIKLEN----PTVPCFLFGHSTGGA 207 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~~----~~~~i~lvGhS~Gg~ 207 (386)
+.++.+.-+..+-+.+.... ...+|.++|.|++..
T Consensus 78 ~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 78 SADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 66666776755556665443 234799999999988
No 299
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=29.06 E-value=4.3e+02 Score=24.38 Aligned_cols=75 Identities=9% Similarity=0.039 Sum_probs=38.3
Q ss_pred EEEEECCCC---CChhhHHHHHHHHHhCCCeEEEeCCCCC--CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEE
Q 016589 125 ILIIIHGLN---EHSGRYAQFARQLTSCNFGVYAMDWIGH--GGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFL 199 (386)
Q Consensus 125 ~vv~lHG~~---~~~~~~~~~~~~L~~~G~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~l 199 (386)
++|+++-.. ............|.+.|+.|+-+..--+ |+... +...+.++.++.+...+..- ....+.++.+
T Consensus 114 plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~--g~~~~~~~i~~~v~~~~~~~-~~~~~~~vli 190 (390)
T TIGR00521 114 PIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGK--GRLAEPETIVKAAEREFSPK-EDLEGKRVLI 190 (390)
T ss_pred CEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccC--CCCCCHHHHHHHHHHHHhhc-cccCCceEEE
Confidence 455555433 2223456677888888988777663222 33221 22236666656555544321 1123345666
Q ss_pred EEe
Q 016589 200 FGH 202 (386)
Q Consensus 200 vGh 202 (386)
.|-
T Consensus 191 t~g 193 (390)
T TIGR00521 191 TAG 193 (390)
T ss_pred ecC
Confidence 666
No 300
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.77 E-value=61 Score=23.70 Aligned_cols=23 Identities=30% Similarity=0.440 Sum_probs=19.8
Q ss_pred hhHHHHHHHHHhCCCeEEEeCCC
Q 016589 137 GRYAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 137 ~~~~~~~~~L~~~G~~vi~~D~~ 159 (386)
..|..+++.|+++||.|++.|--
T Consensus 23 G~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 23 GFFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred chHHHHHHHHHHcCCcEEEEecc
Confidence 35778899999999999999964
No 301
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=28.74 E-value=2.4e+02 Score=20.72 Aligned_cols=72 Identities=19% Similarity=0.198 Sum_probs=46.5
Q ss_pred EEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEech
Q 016589 125 ILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHST 204 (386)
Q Consensus 125 ~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~ 204 (386)
.||.-|| .-+......++.+....-.+.++++.-. .+.++..+.+.++++.+... +.++++-.=+
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~~----------~~~~~~~~~i~~~i~~~~~~---~~viil~Dl~ 67 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPPG----------ESPDDLLEKIKAALAELDSG---EGVLILTDLF 67 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCCC----------CCHHHHHHHHHHHHHHhCCC---CcEEEEEeCC
Confidence 6888899 3455566667777544346777776521 15666677777777765432 3578887777
Q ss_pred hhHHHHh
Q 016589 205 GGAVVLK 211 (386)
Q Consensus 205 Gg~~a~~ 211 (386)
||.....
T Consensus 68 GGSp~n~ 74 (122)
T cd00006 68 GGSPNNA 74 (122)
T ss_pred CCCHHHH
Confidence 8877544
No 302
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=28.61 E-value=2.1e+02 Score=22.25 Aligned_cols=55 Identities=22% Similarity=0.260 Sum_probs=34.1
Q ss_pred HHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHh
Q 016589 142 FARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 142 ~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~ 211 (386)
+...+ ..|-.|++.|.+|--.| - +.+.+.++.+.... .+-.+++|-|.|=.-++.
T Consensus 60 il~~i-~~~~~vi~Ld~~Gk~~s---------S----e~fA~~l~~~~~~G-~~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 60 ILAAI-PKGSYVVLLDIRGKALS---------S----EEFADFLERLRDDG-RDISFLIGGADGLSEAVK 114 (155)
T ss_pred HHHhc-CCCCeEEEEecCCCcCC---------h----HHHHHHHHHHHhcC-CeEEEEEeCcccCCHHHH
Confidence 34444 34778999999875443 2 34444445444433 234778999999777666
No 303
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=28.52 E-value=1.3e+02 Score=23.86 Aligned_cols=55 Identities=13% Similarity=0.136 Sum_probs=38.3
Q ss_pred HHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhh
Q 016589 145 QLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGG 206 (386)
Q Consensus 145 ~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg 206 (386)
.|.+.|+..+.+|.=..=-.. ...+...++.++++.++..++..++.++.-|.|.
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~-------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs 89 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPP-------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGS 89 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCC-------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 477889999999985432111 2233346777788888877765579999999863
No 304
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=28.38 E-value=4.5e+02 Score=23.79 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=46.4
Q ss_pred EEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEech
Q 016589 125 ILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHST 204 (386)
Q Consensus 125 ~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~ 204 (386)
-+++++|+..+.+....+++.+...+..|=.+.|--.|.+.-.+. + .+.+.++.+.+.... --+.+..|.
T Consensus 259 ey~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~~p---s----~e~i~~f~~~L~~~G---i~vtvR~~~ 328 (345)
T PRK14457 259 EYILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQRP---S----PKRIQAFQRVLEQRG---VAVSVRASR 328 (345)
T ss_pred EEEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCC---C----HHHHHHHHHHHHHCC---CeEEEeCCC
Confidence 468999999999998888888865444554444432333322111 2 234444555444332 145789999
Q ss_pred hhHHHHh
Q 016589 205 GGAVVLK 211 (386)
Q Consensus 205 Gg~~a~~ 211 (386)
|.-+...
T Consensus 329 G~di~aa 335 (345)
T PRK14457 329 GLDANAA 335 (345)
T ss_pred CCchhhc
Confidence 9877654
No 305
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=28.08 E-value=4.4e+02 Score=23.55 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=25.6
Q ss_pred EEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCC
Q 016589 125 ILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 125 ~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 159 (386)
+++...|.++.-..+..+++.|.+.||.|..+-..
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECC
Confidence 44555667766666678999999999998887554
No 306
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=27.89 E-value=4.3e+02 Score=23.37 Aligned_cols=75 Identities=9% Similarity=0.047 Sum_probs=46.1
Q ss_pred EEEEECCCCCChhhHHHHHHHHHhCCCeEEEeC----CCCCCC-CCC-----------------CCCCCCChHHHHHHHH
Q 016589 125 ILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMD----WIGHGG-SDG-----------------LHGYVPSLDHVVADTG 182 (386)
Q Consensus 125 ~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D----~~G~G~-S~~-----------------~~~~~~~~~~~~~d~~ 182 (386)
.||++-|-+++..+ .++-.|++++-.++..| |+|..- +.. .+...++...+.++..
T Consensus 5 ~ii~I~GpTasGKS--~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a~ 82 (300)
T PRK14729 5 KIVFIFGPTAVGKS--NILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEAL 82 (300)
T ss_pred cEEEEECCCccCHH--HHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHHH
Confidence 47777777766654 34555665555889888 444321 111 1233457888899999
Q ss_pred HHHHHHHHhCCCCCEEEEEec
Q 016589 183 AFLEKIKLENPTVPCFLFGHS 203 (386)
Q Consensus 183 ~~l~~l~~~~~~~~i~lvGhS 203 (386)
..++.+.... ...+++|-|
T Consensus 83 ~~i~~i~~~g--k~PilvGGT 101 (300)
T PRK14729 83 KIIKELRQQK--KIPIFVGGS 101 (300)
T ss_pred HHHHHHHHCC--CCEEEEeCc
Confidence 9999876653 234666644
No 307
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=27.80 E-value=90 Score=24.68 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=26.1
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEe
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAM 156 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~ 156 (386)
.+.|+++-|-+.+...=--.++.|.++|+.|.++
T Consensus 25 ~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 25 GPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp T-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 4578888888877777777889999999998883
No 308
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=27.19 E-value=2.6e+02 Score=21.98 Aligned_cols=51 Identities=24% Similarity=0.292 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCcc
Q 016589 177 VVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 177 ~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
..+++.++++.+..+. .+|+++|-|..|..-+. ++-..++ .++.++=.+|.
T Consensus 53 ~~~~l~~~L~~~~~~g--k~I~~yGA~~kg~tlln----~~g~~~~---~I~~vvD~np~ 103 (160)
T PF08484_consen 53 SKAELREFLEKLKAEG--KRIAGYGAGAKGNTLLN----YFGLDND---LIDYVVDDNPL 103 (160)
T ss_dssp HHHHHHHHHHHHHHTT----EEEE---SHHHHHHH----HHT--TT---TS--EEES-GG
T ss_pred HHHHHHHHHHHHHHcC--CEEEEECcchHHHHHHH----HhCCCcc---eeEEEEeCChh
Confidence 3444555555555543 56999999999998888 6666665 46666655543
No 309
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=26.91 E-value=32 Score=28.82 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=27.4
Q ss_pred ceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCC
Q 016589 123 KGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~ 159 (386)
.|+||++.|+.+++.. -+.+...|-.+|++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 5799999999877654 566777777789999999876
No 310
>PRK09936 hypothetical protein; Provisional
Probab=26.46 E-value=1.7e+02 Score=25.46 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=27.9
Q ss_pred ChhhHHHHHHHHHhCCCeEEEeCCCCCCCCC
Q 016589 135 HSGRYAQFARQLTSCNFGVYAMDWIGHGGSD 165 (386)
Q Consensus 135 ~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~ 165 (386)
+...|..+.+.+...|++.+.+-+-++|+++
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~ 66 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDAD 66 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCC
Confidence 4567999999999999999999999999884
No 311
>PLN02924 thymidylate kinase
Probab=25.72 E-value=1.7e+02 Score=24.36 Aligned_cols=41 Identities=20% Similarity=0.324 Sum_probs=31.2
Q ss_pred CCceEEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCC
Q 016589 121 ELKGILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGH 161 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~ 161 (386)
..++.+|.+=|..++... -..+.+.|..+|+.|+....|+.
T Consensus 13 ~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~~ 55 (220)
T PLN02924 13 ESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPDR 55 (220)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 445678888888776654 57788899888999988877753
No 312
>PF11080 DUF2622: Protein of unknown function (DUF2622); InterPro: IPR022597 This family is conserved in the Enterobacteriaceae family. The function is not known.
Probab=25.63 E-value=2.3e+02 Score=20.05 Aligned_cols=67 Identities=9% Similarity=0.045 Sum_probs=44.0
Q ss_pred EEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 016589 125 ILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLE 191 (386)
Q Consensus 125 ~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~ 191 (386)
-||=+|-...+...+..+-..|...||....-|--|.-.--+...+...-..-.+++.++++.+...
T Consensus 9 YVVt~~~~e~~l~d~~~L~~~lt~~GF~~tl~D~~G~~HeLgtntfgl~S~l~~~eV~~la~~lae~ 75 (96)
T PF11080_consen 9 YVVTFEYQEAGLTDINELNNHLTRAGFSTTLTDEDGNPHELGTNTFGLISALSAEEVAQLARGLAES 75 (96)
T ss_pred EEEEEEeccCChHHHHHHHHHHHhcCceeEEecCCCCEeecCCCeEEEEecCCHHHHHHHHHHHhhh
Confidence 4666666666778899999999999999999998876433222222111122356777777776644
No 313
>PLN02748 tRNA dimethylallyltransferase
Probab=25.37 E-value=5.1e+02 Score=24.63 Aligned_cols=79 Identities=14% Similarity=0.128 Sum_probs=47.6
Q ss_pred CCceEEEEECCCCCChhhHHHHHHHHHhC-CCeEEEeC----CCCCCC--CCC----------------CCCCCCChHHH
Q 016589 121 ELKGILIIIHGLNEHSGRYAQFARQLTSC-NFGVYAMD----WIGHGG--SDG----------------LHGYVPSLDHV 177 (386)
Q Consensus 121 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~-G~~vi~~D----~~G~G~--S~~----------------~~~~~~~~~~~ 177 (386)
..++.+|+|-|-+++... .++..|+.. +..|+..| |+|..- ... .+...++..++
T Consensus 19 ~~~~~~i~i~GptgsGKs--~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGKS--KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCCEEEEECCCCCCHH--HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 345567788887766654 334455533 56788888 444321 110 12334688889
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEec
Q 016589 178 VADTGAFLEKIKLENPTVPCFLFGHS 203 (386)
Q Consensus 178 ~~d~~~~l~~l~~~~~~~~i~lvGhS 203 (386)
..+....|+.+.... ...+|+|-|
T Consensus 97 ~~~A~~~I~~I~~rg--k~PIlVGGT 120 (468)
T PLN02748 97 RDHAVPLIEEILSRN--GLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHhcC--CCeEEEcCh
Confidence 999999999887654 234566644
No 314
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=24.66 E-value=2.7e+02 Score=21.09 Aligned_cols=40 Identities=8% Similarity=0.173 Sum_probs=29.7
Q ss_pred CCceEEEEECCCCC----ChhhHHHHHHHHHhCCC---eEEEeCCCC
Q 016589 121 ELKGILIIIHGLNE----HSGRYAQFARQLTSCNF---GVYAMDWIG 160 (386)
Q Consensus 121 ~~~p~vv~lHG~~~----~~~~~~~~~~~L~~~G~---~vi~~D~~G 160 (386)
.+.-+||+.|+..+ ....+..+.+.|...|| +++.++..|
T Consensus 15 Ek~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 15 EKNVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred cCcEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 34568889999765 44568889999998887 577777654
No 315
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=24.66 E-value=2.7e+02 Score=22.63 Aligned_cols=77 Identities=16% Similarity=0.245 Sum_probs=44.9
Q ss_pred HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhh
Q 016589 139 YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAA 218 (386)
Q Consensus 139 ~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~ 218 (386)
.....+.+.++++.++.+|-+|... .-.+..+++..+++.+... .++++=-+..+.-.+. .+.
T Consensus 72 ~~~~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~~~~----~~~LVlsa~~~~~~~~----~~~ 134 (196)
T PF00448_consen 72 AREALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEALNPD----EVHLVLSATMGQEDLE----QAL 134 (196)
T ss_dssp HHHHHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHHSSS----EEEEEEEGGGGGHHHH----HHH
T ss_pred HHHHHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhcCCc----cceEEEecccChHHHH----HHH
Confidence 4445566667789999999987752 3345567777777766322 3666655555555554 233
Q ss_pred cCCccccceeEEEEc
Q 016589 219 SYPHIEAMLEGIVLS 233 (386)
Q Consensus 219 ~~p~~~~~v~~lvl~ 233 (386)
.+-+. -.+.++|+.
T Consensus 135 ~~~~~-~~~~~lIlT 148 (196)
T PF00448_consen 135 AFYEA-FGIDGLILT 148 (196)
T ss_dssp HHHHH-SSTCEEEEE
T ss_pred HHhhc-ccCceEEEE
Confidence 32210 036778763
No 316
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=24.42 E-value=4.2e+02 Score=22.12 Aligned_cols=37 Identities=16% Similarity=0.070 Sum_probs=21.4
Q ss_pred eEEEEECCCCCChhh----HHHHHHHHHhCCCeEEEeCCCC
Q 016589 124 GILIIIHGLNEHSGR----YAQFARQLTSCNFGVYAMDWIG 160 (386)
Q Consensus 124 p~vv~lHG~~~~~~~----~~~~~~~L~~~G~~vi~~D~~G 160 (386)
+.|+.|-|-.-.... -+.+.+.+.+.|+.+-.+|++.
T Consensus 27 ~kI~~I~GSlR~~S~n~~la~~~~~~~~~~g~~v~~idl~~ 67 (219)
T TIGR02690 27 PRILLLYGSLRERSYSRLLAEEAARLLGCEGRETRIFDPPG 67 (219)
T ss_pred CEEEEEECCCCCcchHHHHHHHHHHHHhhcCCEEEEeCccc
Confidence 466777664432222 2334445555689998888753
No 317
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=24.04 E-value=1.2e+02 Score=24.21 Aligned_cols=32 Identities=19% Similarity=0.165 Sum_probs=21.6
Q ss_pred EEECCCCCChhh--HHHHHHHHHhCCCeEEEeCC
Q 016589 127 IIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDW 158 (386)
Q Consensus 127 v~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~ 158 (386)
.+.++-||.... -..++..|+++|++|+.+|.
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred EEEcCCCCccHHHHHHHHHhcccccccccccccc
Confidence 344444444433 45688999999999999998
No 318
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=23.96 E-value=4.1e+02 Score=23.54 Aligned_cols=67 Identities=19% Similarity=0.132 Sum_probs=37.3
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhC-CCeEEEeCCC----C--CCCCCC----------------CCCCCCChHHHHHH
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSC-NFGVYAMDWI----G--HGGSDG----------------LHGYVPSLDHVVAD 180 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~----G--~G~S~~----------------~~~~~~~~~~~~~d 180 (386)
+.+|++-|-.++... .++..|++. +..++..|-. + +|-... .+...++..++.++
T Consensus 4 ~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~~ 81 (307)
T PRK00091 4 PKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQRD 81 (307)
T ss_pred ceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHHH
Confidence 457777777766553 345555543 5677777752 1 111110 01122466777888
Q ss_pred HHHHHHHHHHhC
Q 016589 181 TGAFLEKIKLEN 192 (386)
Q Consensus 181 ~~~~l~~l~~~~ 192 (386)
....++.+....
T Consensus 82 a~~~i~~i~~~g 93 (307)
T PRK00091 82 ALAAIADILARG 93 (307)
T ss_pred HHHHHHHHHhCC
Confidence 888888765543
No 319
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=23.60 E-value=1e+02 Score=27.28 Aligned_cols=28 Identities=25% Similarity=0.305 Sum_probs=20.5
Q ss_pred HHHHHHHhC-CCCCEEEEEechhhHHHHh
Q 016589 184 FLEKIKLEN-PTVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 184 ~l~~l~~~~-~~~~i~lvGhS~Gg~~a~~ 211 (386)
.++.+..+. +..+.++.|||+|=+.|+.
T Consensus 73 ~~~~l~~~~~~~~p~~~aGHSlGEysAl~ 101 (310)
T COG0331 73 AYRVLAEQGLGVKPDFVAGHSLGEYSALA 101 (310)
T ss_pred HHHHHHHhcCCCCCceeecccHhHHHHHH
Confidence 344444444 4557899999999999988
No 320
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=23.51 E-value=3.5e+02 Score=20.93 Aligned_cols=76 Identities=7% Similarity=0.045 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhhhHhhc
Q 016589 140 AQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTFVQAAS 219 (386)
Q Consensus 140 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~~~a~~ 219 (386)
..+.+.|.+.||.|+-+- . .+.... .++.+++..+...+. ......-|.+.|...|-.++ |.+
T Consensus 16 ~~l~~~L~~~g~eV~D~G---~--~~~~~~--~dYpd~a~~va~~V~---~g~~~~GIliCGtGiG~sia-------ANK 78 (148)
T PRK05571 16 EEIIEHLEELGHEVIDLG---P--DSYDAS--VDYPDYAKKVAEAVV---AGEADRGILICGTGIGMSIA-------ANK 78 (148)
T ss_pred HHHHHHHHHCCCEEEEcC---C--CCCCCC--CCHHHHHHHHHHHHH---cCCCCEEEEEcCCcHHHHHH-------Hhc
Confidence 457788888999885432 1 111101 145555555554442 22212225555665665554 558
Q ss_pred CCccccceeEEEEcCcc
Q 016589 220 YPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 220 ~p~~~~~v~~lvl~~p~ 236 (386)
+|. |.+.+..++.
T Consensus 79 ~~G----IRAA~~~d~~ 91 (148)
T PRK05571 79 VKG----IRAALCHDTY 91 (148)
T ss_pred CCC----eEEEEECCHH
Confidence 886 7776665543
No 321
>PHA02114 hypothetical protein
Probab=23.44 E-value=1.2e+02 Score=21.29 Aligned_cols=35 Identities=14% Similarity=0.258 Sum_probs=29.0
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeC
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMD 157 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D 157 (386)
..+||+=-.+..+..-|-.++..|-+.||.|++-.
T Consensus 82 ~gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 82 YGTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred cCeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 45777777777788889999999999999999854
No 322
>PRK07933 thymidylate kinase; Validated
Probab=23.12 E-value=1.9e+02 Score=23.84 Aligned_cols=39 Identities=23% Similarity=0.287 Sum_probs=28.7
Q ss_pred EEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCCCCC
Q 016589 126 LIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGHGGS 164 (386)
Q Consensus 126 vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S 164 (386)
+|.+=|.-++... -..+.+.|.++|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 3455565555443 57788999999999999999977744
No 323
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=23.01 E-value=3.3e+02 Score=20.69 Aligned_cols=29 Identities=14% Similarity=-0.009 Sum_probs=20.4
Q ss_pred CCCChhhHHHHHHHHHhCCCeEEEeCCCC
Q 016589 132 LNEHSGRYAQFARQLTSCNFGVYAMDWIG 160 (386)
Q Consensus 132 ~~~~~~~~~~~~~~L~~~G~~vi~~D~~G 160 (386)
.||.......+++.|.++|+.|..+-...
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 44445557789999999999998885543
No 324
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=22.98 E-value=4.3e+02 Score=24.30 Aligned_cols=37 Identities=16% Similarity=-0.018 Sum_probs=28.2
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCC
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 159 (386)
+-.|++.--++.+...-..+++.|.+.|..|..+++.
T Consensus 248 ~V~l~Y~smyg~T~~ma~aiaegl~~~gv~v~~~~~~ 284 (388)
T COG0426 248 KVDLIYDSMYGNTEKMAQAIAEGLMKEGVDVEVINLE 284 (388)
T ss_pred eEEEEEecccCCHHHHHHHHHHHhhhcCCceEEEEcc
Confidence 3455555566666667788899999999999999874
No 325
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=22.97 E-value=87 Score=28.28 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=28.0
Q ss_pred cceeEeccCCceEEEEEecCCCC--------CCceEEEEECCCCC
Q 016589 98 STSLFFGVKRNALFCRSWIPVSG--------ELKGILIIIHGLNE 134 (386)
Q Consensus 98 ~~~~~~~~~g~~l~~~~~~p~~~--------~~~p~vv~lHG~~~ 134 (386)
+.......||.++-|..|+++++ -++|+|.++|-+-.
T Consensus 452 EkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLS 496 (506)
T KOG3551|consen 452 EKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLS 496 (506)
T ss_pred HHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhh
Confidence 33445567899999999986654 46899999998764
No 326
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=22.93 E-value=2.9e+02 Score=23.76 Aligned_cols=59 Identities=10% Similarity=0.041 Sum_probs=37.5
Q ss_pred CceEEEEECCCCCChhh----HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 016589 122 LKGILIIIHGLNEHSGR----YAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIK 189 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~----~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~ 189 (386)
..|++++.||-....-. -..+.+.|.+.|..+....++|.+. .+..+..-+...+++..
T Consensus 210 ~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H---------~f~~~~~~~~~~~~~~~ 272 (275)
T TIGR02821 210 RHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDH---------SYYFIASFIADHLRHHA 272 (275)
T ss_pred cCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCc---------cchhHHHhHHHHHHHHH
Confidence 35788888997553222 2457788888888888888887553 33444455555555543
No 327
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=22.93 E-value=1.7e+02 Score=23.04 Aligned_cols=23 Identities=22% Similarity=0.135 Sum_probs=18.7
Q ss_pred CEEEEEechhhHHHHhhhhhHhhcCCc
Q 016589 196 PCFLFGHSTGGAVVLKRTFVQAASYPH 222 (386)
Q Consensus 196 ~i~lvGhS~Gg~~a~~~~~~~a~~~p~ 222 (386)
.-.+.|-|.|+.++.. ++...+.
T Consensus 27 ~d~v~GtSaGAi~aa~----~a~g~~~ 49 (172)
T cd07198 27 IDIIAGTSAGAIVAAL----LASGRDL 49 (172)
T ss_pred CCEEEEECHHHHHHHH----HHcCCCH
Confidence 4589999999999999 7776543
No 328
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=22.86 E-value=3.2e+02 Score=23.36 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=14.8
Q ss_pred EEeeCCCCccChHHHHHHHHHhhcCCCcEEEcCCCC
Q 016589 321 VLHGTGDKVTDPLASQDLYNEAASRFKDIKLYEGLL 356 (386)
Q Consensus 321 ii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~g 356 (386)
+|-|..|..-.....+++.+...+.+.++.++|-++
T Consensus 3 ~iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptAS 38 (250)
T TIGR02069 3 IIGGAEDKVGDREILREFVSRAGGEDAIIVIITSAS 38 (250)
T ss_pred EEeCccccCChHHHHHHHHHHhCCCCceEEEEeCCC
Confidence 344444443333333444444333334444455443
No 329
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=22.82 E-value=1.3e+02 Score=20.91 Aligned_cols=28 Identities=14% Similarity=0.125 Sum_probs=18.1
Q ss_pred CceEEEEECCCCCChhhHHHHHHHHHhCCCeE
Q 016589 122 LKGILIIIHGLNEHSGRYAQFARQLTSCNFGV 153 (386)
Q Consensus 122 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~v 153 (386)
.+++|++++....+ ...+..|.+.||.+
T Consensus 61 ~~~ivv~C~~G~rs----~~aa~~L~~~G~~~ 88 (100)
T cd01523 61 DQEVTVICAKEGSS----QFVAELLAERGYDV 88 (100)
T ss_pred CCeEEEEcCCCCcH----HHHHHHHHHcCcee
Confidence 35778877754432 34466777889983
No 330
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=22.40 E-value=2.8e+02 Score=24.06 Aligned_cols=38 Identities=21% Similarity=0.146 Sum_probs=23.8
Q ss_pred EEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCCC
Q 016589 125 ILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGHG 162 (386)
Q Consensus 125 ~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G 162 (386)
++|++-|+++++.. -..+.+.|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 47888899888776 356777888888999888855444
No 331
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=22.02 E-value=2e+02 Score=19.01 Aligned_cols=36 Identities=14% Similarity=0.178 Sum_probs=26.1
Q ss_pred hCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 016589 148 SCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIK 189 (386)
Q Consensus 148 ~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~ 189 (386)
+.+|.+..+|++|+-. .+ .+.++..+.+..+++...
T Consensus 13 dg~y~~~~Pdlpgc~s-~G-----~T~eea~~n~~eai~l~~ 48 (73)
T COG1598 13 DGGYVASVPDLPGCHS-QG-----ETLEEALQNAKEAIELHL 48 (73)
T ss_pred CCCEEEEeCCCCCccc-cC-----CCHHHHHHHHHHHHHHHH
Confidence 5689999999999853 22 277887777777776543
No 332
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=21.85 E-value=5.4e+02 Score=22.46 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=47.3
Q ss_pred ECCCCCChhhHHHHHHHHHhCCCeEEEe------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh--CCCCCEEEE
Q 016589 129 IHGLNEHSGRYAQFARQLTSCNFGVYAM------DWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLE--NPTVPCFLF 200 (386)
Q Consensus 129 lHG~~~~~~~~~~~~~~L~~~G~~vi~~------D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~i~lv 200 (386)
+||.-++... ...+...|++|.++ +.+|||...+.. ... +++.++++.+... ...-..++-
T Consensus 11 v~G~vGn~AA----~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v----~~~---e~l~~~l~~l~~~~~~~~~davlt 79 (281)
T COG2240 11 VYGSVGNSAA----IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV----MPP---EQLADLLNGLEAIDKLGECDAVLT 79 (281)
T ss_pred eecccccHhH----HHHHHHcCCceeeeceEEecCCCCCCCCCCcC----CCH---HHHHHHHHHHHhcccccccCEEEE
Confidence 4565555432 34455668876654 688998765543 223 3333444443331 111246777
Q ss_pred EechhhHHHHhhhhhHhhcCCccccceeEEEEcCcccccCC
Q 016589 201 GHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAPALRVEP 241 (386)
Q Consensus 201 GhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p~~~~~~ 241 (386)
|+=-.+...-..+..+.+...+ .-+.+++++|......
T Consensus 80 GYlgs~~qv~~i~~~v~~vk~~---~P~~~~l~DPVMGD~g 117 (281)
T COG2240 80 GYLGSAEQVRAIAGIVKAVKEA---NPNALYLCDPVMGDPG 117 (281)
T ss_pred ccCCCHHHHHHHHHHHHHHhcc---CCCeEEEeCCcccCCC
Confidence 7633222222100101111111 2345788998876543
No 333
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=21.80 E-value=5.9e+02 Score=22.84 Aligned_cols=25 Identities=16% Similarity=0.336 Sum_probs=16.0
Q ss_pred HHHHHHHhCCCCCEEEEEechhhHH
Q 016589 184 FLEKIKLENPTVPCFLFGHSTGGAV 208 (386)
Q Consensus 184 ~l~~l~~~~~~~~i~lvGhS~Gg~~ 208 (386)
+++.+.......+++++=|+.=|..
T Consensus 126 i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 126 IISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred HHHHHhccCCCCceEEEEECCCChh
Confidence 3344443322457999999988776
No 334
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=21.34 E-value=71 Score=27.43 Aligned_cols=13 Identities=31% Similarity=0.611 Sum_probs=11.0
Q ss_pred CCEEEEEechhhH
Q 016589 195 VPCFLFGHSTGGA 207 (386)
Q Consensus 195 ~~i~lvGhS~Gg~ 207 (386)
..|+++|||+|..
T Consensus 235 ~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 235 DEIIIYGHSLGEV 247 (270)
T ss_pred CEEEEEeCCCchh
Confidence 4699999999965
No 335
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=21.16 E-value=5.1e+02 Score=23.78 Aligned_cols=87 Identities=16% Similarity=0.138 Sum_probs=0.0
Q ss_pred CceEEEEECCCCC-------ChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCC
Q 016589 122 LKGILIIIHGLNE-------HSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPT 194 (386)
Q Consensus 122 ~~p~vv~lHG~~~-------~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 194 (386)
+...||++||... +.+.|..+++.+.++ =.+-.+|.--.|..+ .+++.+.-+..++.....
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~lip~~D~AYQGF~~-------GleeDa~~lR~~a~~~~~---- 237 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-GLIPFFDIAYQGFAD-------GLEEDAYALRLFAEVGPE---- 237 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-CCeeeeehhhhhhcc-------chHHHHHHHHHHHHhCCc----
Q ss_pred CCEEEEEechhhHHHHhhhhhHhhcCCccccceeEEEEcCc
Q 016589 195 VPCFLFGHSTGGAVVLKRTFVQAASYPHIEAMLEGIVLSAP 235 (386)
Q Consensus 195 ~~i~lvGhS~Gg~~a~~~~~~~a~~~p~~~~~v~~lvl~~p 235 (386)
.++..|+.=..++. .+ ||-++.+++.
T Consensus 238 ---~lva~S~SKnfgLY---------gE---RVGa~~vva~ 263 (396)
T COG1448 238 ---LLVASSFSKNFGLY---------GE---RVGALSVVAE 263 (396)
T ss_pred ---EEEEehhhhhhhhh---------hh---ccceeEEEeC
No 336
>KOG0673 consensus Thymidylate synthase [Nucleotide transport and metabolism]
Probab=21.07 E-value=1.7e+02 Score=24.38 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=27.6
Q ss_pred EEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEE
Q 016589 153 VYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFL 199 (386)
Q Consensus 153 vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~l 199 (386)
|+.+.||-+|..-..-...|+-. -++.+.++|+.++.+..+++|++
T Consensus 114 vyGfqWrHfgA~Y~~~~~dy~gq-gvdQL~~vI~~ik~NP~drRIim 159 (293)
T KOG0673|consen 114 VYGFQWRHFGARYEDCDSDYTGQ-GVDQLADVINKIKNNPDDRRIIM 159 (293)
T ss_pred ccceeeeecCccccccccccccc-cHHHHHHHHHHHhcCCccceeee
Confidence 66677776664422222222222 26788889999988766666754
No 337
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=21.02 E-value=1.3e+02 Score=25.98 Aligned_cols=18 Identities=39% Similarity=0.434 Sum_probs=15.4
Q ss_pred CCCEEEEEechhhHHHHh
Q 016589 194 TVPCFLFGHSTGGAVVLK 211 (386)
Q Consensus 194 ~~~i~lvGhS~Gg~~a~~ 211 (386)
-.+-.++|||+|=+.|+.
T Consensus 82 i~p~~v~GhS~GE~aAa~ 99 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALV 99 (290)
T ss_pred CCCCEEeecCHHHHHHHH
Confidence 446799999999998887
No 338
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=20.64 E-value=1.8e+02 Score=25.21 Aligned_cols=38 Identities=11% Similarity=0.035 Sum_probs=26.6
Q ss_pred EEEEECCCCCChhh--HHHHHHHHHhCCCeEEEeCCCCCCC
Q 016589 125 ILIIIHGLNEHSGR--YAQFARQLTSCNFGVYAMDWIGHGG 163 (386)
Q Consensus 125 ~vv~lHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~ 163 (386)
+|.+. |=||.... -..++..|+++|++|+.+|+=-.|.
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n 42 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKAD 42 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCccc
Confidence 45555 54444433 4678899999999999999854443
No 339
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=20.59 E-value=1e+02 Score=22.99 Aligned_cols=34 Identities=24% Similarity=0.156 Sum_probs=23.4
Q ss_pred EEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCC
Q 016589 126 LIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 126 vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 159 (386)
++...|..|+-.-+-.+++.|.++|+.|...-.+
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4555566666666778899999999998755444
No 340
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=20.58 E-value=2.4e+02 Score=22.32 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=23.0
Q ss_pred EEEECCCCCChhhHHHHHHHHHhCCCeEEEeC
Q 016589 126 LIIIHGLNEHSGRYAQFARQLTSCNFGVYAMD 157 (386)
Q Consensus 126 vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D 157 (386)
-|++.|.|.+...-..+...|...|..+...+
T Consensus 32 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhCCCeEEEeC
Confidence 46777777766655667777777788887764
No 341
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=20.28 E-value=5.8e+02 Score=22.23 Aligned_cols=89 Identities=21% Similarity=0.182 Sum_probs=47.1
Q ss_pred ChhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHHhhhh
Q 016589 135 HSGRYAQFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVLKRTF 214 (386)
Q Consensus 135 ~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~~~~~ 214 (386)
+......+++++.+.|..-+.+. | |.+... ..+.++..+-+..+++....+. + +++|-+.+-.-+..
T Consensus 19 D~~~l~~l~~~l~~~Gv~gi~v~----G-stGE~~-~Ls~eEr~~l~~~~~~~~~~~~---p-vi~gv~~~t~~~i~--- 85 (289)
T cd00951 19 DEDAYRAHVEWLLSYGAAALFAA----G-GTGEFF-SLTPDEYAQVVRAAVEETAGRV---P-VLAGAGYGTATAIA--- 85 (289)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC----c-CCcCcc-cCCHHHHHHHHHHHHHHhCCCC---C-EEEecCCCHHHHHH---
Confidence 44557788899888888776653 2 222111 1255555555555555543222 3 34454434444444
Q ss_pred hHhhcCCccccceeEEEEcCccccc
Q 016589 215 VQAASYPHIEAMLEGIVLSAPALRV 239 (386)
Q Consensus 215 ~~a~~~p~~~~~v~~lvl~~p~~~~ 239 (386)
++....+. .+++++++.|.+..
T Consensus 86 -~a~~a~~~--Gad~v~~~pP~y~~ 107 (289)
T cd00951 86 -YAQAAEKA--GADGILLLPPYLTE 107 (289)
T ss_pred -HHHHHHHh--CCCEEEECCCCCCC
Confidence 33332221 36778777776543
No 342
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=20.22 E-value=1.9e+02 Score=19.42 Aligned_cols=19 Identities=26% Similarity=0.221 Sum_probs=16.2
Q ss_pred HHHHHHHHHhCCCeEEEeC
Q 016589 139 YAQFARQLTSCNFGVYAMD 157 (386)
Q Consensus 139 ~~~~~~~L~~~G~~vi~~D 157 (386)
-..++..|++.|++|+.+|
T Consensus 16 ~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 16 AANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHCCCeEEEEC
Confidence 4668888888899999999
No 343
>PRK05568 flavodoxin; Provisional
Probab=20.07 E-value=3.5e+02 Score=20.28 Aligned_cols=36 Identities=11% Similarity=-0.033 Sum_probs=25.6
Q ss_pred eEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCC
Q 016589 124 GILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWI 159 (386)
Q Consensus 124 p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 159 (386)
-+|++.-+.|.+...-+.+++.+.+.|..|-.+|+.
T Consensus 4 ~~IvY~S~~GnT~~~a~~i~~~~~~~g~~v~~~~~~ 39 (142)
T PRK05568 4 INIIYWSGTGNTEAMANLIAEGAKENGAEVKLLNVS 39 (142)
T ss_pred EEEEEECCCchHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 356666666666666677788887788888888775
No 344
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=20.07 E-value=3.4e+02 Score=24.03 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=24.9
Q ss_pred ceEEEEECCCCCChhhHHHHHHHHHhCCCeEEEeCCCCC
Q 016589 123 KGILIIIHGLNEHSGRYAQFARQLTSCNFGVYAMDWIGH 161 (386)
Q Consensus 123 ~p~vv~lHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~ 161 (386)
..++|.+.|.-.++-. +..|+++||.|..+=++.+
T Consensus 6 ~~VvvamSgGVDSsVa----a~Ll~~~g~~v~gv~M~nW 40 (377)
T KOG2805|consen 6 DRVVVAMSGGVDSSVA----ARLLAARGYNVTGVFMKNW 40 (377)
T ss_pred ceEEEEecCCchHHHH----HHHHHhcCCCeeEEeeecc
Confidence 3577777776655532 4556788999998888766
No 345
>COG5023 Tubulin [Cytoskeleton]
Probab=20.02 E-value=2.9e+02 Score=25.17 Aligned_cols=61 Identities=18% Similarity=0.147 Sum_probs=38.8
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCEEEEEechhhHHHH----hhhhhHhhcCCccccceeEEEEcCcc
Q 016589 173 SLDHVVADTGAFLEKIKLENPTVPCFLFGHSTGGAVVL----KRTFVQAASYPHIEAMLEGIVLSAPA 236 (386)
Q Consensus 173 ~~~~~~~d~~~~l~~l~~~~~~~~i~lvGhS~Gg~~a~----~~~~~~a~~~p~~~~~v~~lvl~~p~ 236 (386)
--.+..+|+.+.|+......+.-.=+++=||.||.... .++-.+..++|+ ++..-..+-|.
T Consensus 108 vG~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypk---K~~~tfSV~P~ 172 (443)
T COG5023 108 VGKEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPK---KIKLTFSVFPA 172 (443)
T ss_pred hhHHHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcch---hheeEEEeccC
Confidence 44667888888888776655444557788888776532 223335667887 66555555554
Done!