Your job contains 1 sequence.
>016590
MACFRSAKHPFRIFFYNRLSAATNSKYGYSTCASKGTPVYQARQIKDLFSFKYLNPKSSF
ALISRNFSDQAPAATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVL
ASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYLALALAKQALVAENVSQ
PVSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPG
VVSTYLHTSPQSGLGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVS
ADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILD
NLSKEVGSPVKIGSFFRMEVGEGIRR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016590
(386 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2136158 - symbol:AT4G11120 species:3702 "Arabi... 1226 8.9e-125 1
TIGR_CMR|ECH_0515 - symbol:ECH_0515 "translation elongati... 288 3.2e-43 2
TIGR_CMR|SPO_1975 - symbol:SPO_1975 "translation elongati... 233 2.0e-38 2
TIGR_CMR|BA_3964 - symbol:BA_3964 "translation elongation... 243 2.3e-38 2
UNIPROTKB|Q9KPV3 - symbol:tsf "Elongation factor Ts" spec... 190 7.7e-31 3
TIGR_CMR|VC_2259 - symbol:VC_2259 "elongation factor Ts" ... 190 7.7e-31 3
TIGR_CMR|CPS_1554 - symbol:CPS_1554 "translation elongati... 190 1.7e-28 2
DICTYBASE|DDB_G0286399 - symbol:tsfm "elongation factor T... 317 1.9e-28 1
UNIPROTKB|P0A6P1 - symbol:tsf species:83333 "Escherichia ... 177 2.6e-27 3
TIGR_CMR|APH_0398 - symbol:APH_0398 "translation elongati... 303 5.7e-27 1
UNIPROTKB|Q10788 - symbol:tsf "Elongation factor Ts" spec... 190 2.0e-26 2
TIGR_CMR|NSE_0947 - symbol:NSE_0947 "translation elongati... 196 2.9e-26 2
TIGR_CMR|CHY_1786 - symbol:CHY_1786 "translation elongati... 269 2.3e-23 1
TIGR_CMR|SO_1630 - symbol:SO_1630 "translation elongation... 167 5.6e-23 2
TAIR|locus:2119946 - symbol:emb2726 "embryo defective 272... 189 3.1e-22 3
TIGR_CMR|GSU_1920 - symbol:GSU_1920 "translation elongati... 235 1.5e-19 1
GENEDB_PFALCIPARUM|PFC0225c - symbol:PFC0225c "elongation... 156 4.2e-17 2
UNIPROTKB|O97235 - symbol:PFC0225c "Elongation factor Ts,... 156 4.2e-17 2
TIGR_CMR|CBU_1385 - symbol:CBU_1385 "translation elongati... 214 1.9e-16 1
ZFIN|ZDB-GENE-061215-17 - symbol:tsfm "Ts translation elo... 213 1.1e-15 1
RGD|1593058 - symbol:Tsfm "Ts translation elongation fact... 211 3.1e-15 1
TIGR_CMR|CJE_1315 - symbol:CJE_1315 "translation elongati... 208 1.4e-14 1
MGI|MGI:1913649 - symbol:Tsfm "Ts translation elongation ... 192 7.1e-13 1
UNIPROTKB|P43897 - symbol:TSFM "Elongation factor Ts, mit... 190 1.3e-12 1
POMBASE|SPBC800.07c - symbol:tsf1 "mitochondrial translat... 131 1.1e-11 2
TIGR_CMR|DET_0376 - symbol:DET_0376 "translation elongati... 161 3.0e-11 1
UNIPROTKB|F1PBM5 - symbol:METTL21B "Elongation factor Ts"... 178 3.2e-11 1
WB|WBGene00010094 - symbol:tsfm-1 species:6239 "Caenorhab... 172 1.5e-10 1
UNIPROTKB|C9JT21 - symbol:TSFM "Elongation factor Ts" spe... 149 6.2e-10 1
UNIPROTKB|F8W6R3 - symbol:TSFM "Elongation factor Ts, mit... 164 8.7e-10 1
UNIPROTKB|P43896 - symbol:TSFM "Elongation factor Ts, mit... 166 9.4e-10 1
UNIPROTKB|F8VPA7 - symbol:TSFM "Elongation factor Ts, mit... 146 2.6e-09 1
UNIPROTKB|C9JG32 - symbol:TSFM "Elongation factor Ts" spe... 138 9.8e-09 1
UNIPROTKB|F8VS27 - symbol:TSFM "Elongation factor Ts, mit... 146 4.2e-08 1
UNIPROTKB|I3LF68 - symbol:TSFM "Elongation factor Ts, mit... 126 2.0e-07 1
FB|FBgn0032646 - symbol:CG6412 species:7227 "Drosophila m... 145 2.0e-07 1
>TAIR|locus:2136158 [details] [associations]
symbol:AT4G11120 species:3702 "Arabidopsis thaliana"
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006414
"translational elongation" evidence=IEA;ISS] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00889 PROSITE:PS01127 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161531 GO:GO:0003746
SUPFAM:SSF46934 EMBL:AF080120 EMBL:AL049876 eggNOG:COG0264
HOGENOM:HOG000220986 OMA:YLHGTRI Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116 EMBL:BT015741
EMBL:BT020174 IPI:IPI00518106 PIR:T08191 RefSeq:NP_192850.2
UniGene:At.3293 ProteinModelPortal:Q5XF75 SMR:Q5XF75 STRING:Q5XF75
PaxDb:Q5XF75 PRIDE:Q5XF75 EnsemblPlants:AT4G11120.1 GeneID:826713
KEGG:ath:AT4G11120 GeneFarm:4380 TAIR:At4g11120 InParanoid:Q5XF75
PhylomeDB:Q5XF75 ProtClustDB:CLSN2680955 Genevestigator:Q5XF75
Uniprot:Q5XF75
Length = 395
Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
Identities = 248/387 (64%), Positives = 303/387 (78%)
Query: 1 MACFRSAKHPFRIFFYNRLSAATNSKYGYSTCASKGTPVYQARQIKDLFSFKYLNPKSSF 60
MA R+ + P +F+Y+ +S+ +S YST ASK + Q K Y + F
Sbjct: 1 MAFARAVRRPIGVFYYS-VSSRFSSGNEYSTVASKFETL---SQYKSSVPSGYTSLVRGF 56
Query: 61 ALISRNFSDQAP-AATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKV 119
R+FS +AP A ++Q++LIKQLRE+TSAP+KDVK +LV+C+WD+EAA K+LRKRGKV
Sbjct: 57 GNFIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKV 116
Query: 120 LASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVS 179
LASKKSSRTA EG+LA+AQNE K AVIELNCETDFV+RNEIFQY E+ S
Sbjct: 117 LASKKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESSS 176
Query: 180 QPVSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSP 239
Q VSG+FP GPE E KLNLDHPK+ GETTV NA+TEVAAIMGENVK RRGFL+S SS
Sbjct: 177 QQVSGVFPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSSA 236
Query: 240 GVVSTYLHTSPQSGLGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELV 299
GV+S YLHTSPQ GLGRIAG++SLEVE ++ + ++RVGSELAMH+VA KPLFL+K+LV
Sbjct: 237 GVLSAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAAKPLFLSKDLV 296
Query: 300 SADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTIL 359
S++A+ NEREILKSQAESTGK+ MAIEK+VEGRLRKY+EEV LMEQKF++ND +NIKT++
Sbjct: 297 SSEAMANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVNDAINIKTLV 356
Query: 360 DNLSKEVGSPVKIGSFFRMEVGEGIRR 386
DNLSKEVGSPVK+ F R+EVGEGI R
Sbjct: 357 DNLSKEVGSPVKVTDFLRVEVGEGIER 383
>TIGR_CMR|ECH_0515 [details] [associations]
symbol:ECH_0515 "translation elongation factor Ts"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 RefSeq:YP_507330.1
ProteinModelPortal:Q2GGV3 STRING:Q2GGV3 GeneID:3928034
KEGG:ech:ECH_0515 PATRIC:20576498
BioCyc:ECHA205920:GJNR-517-MONOMER Uniprot:Q2GGV3
Length = 288
Score = 288 (106.4 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 64/198 (32%), Positives = 116/198 (58%)
Query: 176 ENVSQPVSGLFPVGPEY-LEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLL 234
E + V L + +Y +E ++ L H + G T++ + I A++GEN+ L + L
Sbjct: 86 EKFQKLVLNLVSLANQYAVEDIEDFLKHEYVSG-TSIHDEIMTNIAVIGENIHLNKIGYL 144
Query: 235 SASSPGVVSTYLHTSPQSGLGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPLFL 294
S ++ GVV Y+H+ + LG+I +++LE ++ D L + ++AMHIVA +P L
Sbjct: 145 SVNA-GVVGGYIHSPVVNNLGKIGAIVALE---STADNDKLNVLARQIAMHIVAARPEAL 200
Query: 295 TKELVSADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLN 354
+ +L+ D L+ EREI+K Q + K E++++GR+ K+Y++VVL+EQ FVM++ L
Sbjct: 201 SVDLLDKDILDKEREIIKKQVDQLNKPVSVAERIIDGRIAKFYQDVVLLEQIFVMDNQLT 260
Query: 355 IKTILDNLSKEVGSPVKI 372
I ++ E+G+ + +
Sbjct: 261 ISELIKKKESELGASINL 278
Score = 185 (70.2 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 39/85 (45%), Positives = 57/85 (67%)
Query: 78 VNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALA 137
+N +K+LR T A + D K AL C DIE A LR++G A KKS++ ++GL+A+
Sbjct: 5 INAVKELRNLTGAGVGDCKEALNSCGGDIEKAKNYLREQGIAKAYKKSTKDVSDGLVAVH 64
Query: 138 QNESKAAVIELNCETDFVSRNEIFQ 162
N ++ A++E+N ETDFV+RNE FQ
Sbjct: 65 VNGNQGAILEVNSETDFVARNEKFQ 89
>TIGR_CMR|SPO_1975 [details] [associations]
symbol:SPO_1975 "translation elongation factor Ts"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 RefSeq:YP_167210.1
ProteinModelPortal:Q5LRZ5 GeneID:3192723 KEGG:sil:SPO1975
PATRIC:23377281 Uniprot:Q5LRZ5
Length = 291
Score = 233 (87.1 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 59/180 (32%), Positives = 101/180 (56%)
Query: 205 IGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSGLGRIAGLLSLE 264
+GG++ V + +T A +GEN+ +RR L+ V TY+H + +G+G+I L++++
Sbjct: 113 LGGKS-VADTLTAKIATIGENMSVRR---LAKLEGETVVTYVHNAATTGMGKIGVLVAMK 168
Query: 265 VEDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMA 324
D + +G ++AMHI A P L++ + +E E+++ A +GK
Sbjct: 169 GGD--------EALGKQVAMHIAAVNPAALSEAEMDPVVVEKEKQVQMDIARESGKPEAV 220
Query: 325 IEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEGI 384
IEKM+EGR++K+ E L+ Q+FV+N L + + E G+ +I F R+EVGEGI
Sbjct: 221 IEKMIEGRMKKFVAESTLLSQQFVVNPDLTVGAA----AAEAGA--EITGFVRLEVGEGI 274
Score = 199 (75.1 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 41/83 (49%), Positives = 55/83 (66%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQN 139
L+K+LR+ T A M D K AL + D D+EAA+ LR +G A+KKS RTA EGL+A+
Sbjct: 7 LVKELRDSTGAGMMDAKKALTETDGDMEAAVDWLRTKGLAKAAKKSGRTAAEGLVAVVVE 66
Query: 140 ESKAAVIELNCETDFVSRNEIFQ 162
K +E+N ETDFV++N FQ
Sbjct: 67 GGKGVAVEVNSETDFVAKNSDFQ 89
>TIGR_CMR|BA_3964 [details] [associations]
symbol:BA_3964 "translation elongation factor Ts"
species:198094 "Bacillus anthracis str. Ames" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003746
SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 RefSeq:NP_846207.1
RefSeq:YP_020603.1 RefSeq:YP_029928.1 ProteinModelPortal:Q81WK9
PRIDE:Q81WK9 DNASU:1086812 EnsemblBacteria:EBBACT00000010254
EnsemblBacteria:EBBACT00000015045 EnsemblBacteria:EBBACT00000019672
GeneID:1086812 GeneID:2819542 GeneID:2848103 KEGG:ban:BA_3964
KEGG:bar:GBAA_3964 KEGG:bat:BAS3677 HOGENOM:HOG000220987
BioCyc:BANT260799:GJAJ-3735-MONOMER
BioCyc:BANT261594:GJ7F-3852-MONOMER Uniprot:Q81WK9
Length = 295
Score = 243 (90.6 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 63/176 (35%), Positives = 100/176 (56%)
Query: 211 VQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSGLGRIAGLLSLEVEDGSS 270
V+ I E A +GE + LRR ++S + YLH GRI G+L+ V +GS+
Sbjct: 121 VEEHINEAIAKIGEKLTLRRFEIVSKTDADAFGAYLHMG-----GRI-GVLT--VLEGST 172
Query: 271 SFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIEKMVE 330
+ ++AMHI A P ++ ++ V+A+ +E+ER++L QA + GK + KMVE
Sbjct: 173 D----EAAAKDVAMHIAAVNPKYIDRDAVTAEEVEHERQVLTQQALNEGKPEKIVAKMVE 228
Query: 331 GRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
GRL K++EE+ L++Q FV N + ++ ++ SK G +K F R VGEGI +
Sbjct: 229 GRLGKFFEEICLLDQAFVKNPDMKVRQFVE--SK--GGTLK--GFVRYAVGEGIEK 278
Score = 186 (70.5 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 41/90 (45%), Positives = 59/90 (65%)
Query: 73 AATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEG 132
A T Q ++K+LRE+T A M D K AL + + D+E A+ LR++G A+KK+ R A EG
Sbjct: 2 AITAQ--MVKELREKTGAGMMDCKKALTETNGDMEKAIDFLREKGIAKAAKKADRIAAEG 59
Query: 133 LLALAQNESKAAVIELNCETDFVSRNEIFQ 162
L + N + ++ELN ETDFV++NE FQ
Sbjct: 60 LTFIETNGNDGLILELNSETDFVAKNEGFQ 89
>UNIPROTKB|Q9KPV3 [details] [associations]
symbol:tsf "Elongation factor Ts" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 PIR:A82100 RefSeq:NP_231890.1
ProteinModelPortal:Q9KPV3 PRIDE:Q9KPV3 DNASU:2613181 GeneID:2613181
KEGG:vch:VC2259 PATRIC:20083561 Uniprot:Q9KPV3
Length = 280
Score = 190 (71.9 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 51/119 (42%), Positives = 70/119 (58%)
Query: 268 GSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIEK 327
GS+ + LK V AMH+ A +P FLT + V A+ + ERE+ A + GKS EK
Sbjct: 156 GSADVETLKHV----AMHVAASRPEFLTPDDVPAEVVAKEREVQVGIAMNEGKSKEIAEK 211
Query: 328 MVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
MVEGR++K+ EV L Q FVM KT+ + L+ E G+ V +F R+EVGEGI +
Sbjct: 212 MVEGRMKKFTGEVSLTGQPFVMEPK---KTVGEILA-EKGATVS--AFIRLEVGEGIEK 264
Score = 189 (71.6 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 36/82 (43%), Positives = 57/82 (69%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQN 139
L+K+LRE+T A M + K ALV+ + DIE A++ +RK G A+KK+ A EG + + +
Sbjct: 7 LVKELRERTGAGMMECKKALVETNGDIELAIENMRKSGAAKAAKKAGNIAAEGTIMIKEG 66
Query: 140 ESKAAVIELNCETDFVSRNEIF 161
E AA++E+NC+TDFV+++ F
Sbjct: 67 EGIAALVEVNCQTDFVAKDSNF 88
Score = 44 (20.5 bits), Expect = 6.6e-16, Sum P(3) = 6.6e-16
Identities = 18/83 (21%), Positives = 35/83 (42%)
Query: 18 RLSAATNSKYGYSTCASKGTPVYQARQIKDLFSFKYLNPKSSFALISRNFSDQAPAATEQ 77
R S A + A++GT ++ + + + +N ++ F NF A T+
Sbjct: 41 RKSGAAKAAKKAGNIAAEGT--IMIKEGEGIAALVEVNCQTDFVAKDSNFVAFANQVTDA 98
Query: 78 VNLIKQLREQTSAPMKDVKLALV 100
K E+ A ++ ++ALV
Sbjct: 99 ALASKASVEELQAQFEEARVALV 121
Score = 39 (18.8 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 212 QNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLH 247
+ A + A +GEN+ +RR + + ++TY H
Sbjct: 114 EEARVALVAKIGENINIRRVQYVEGEA---LATYRH 146
>TIGR_CMR|VC_2259 [details] [associations]
symbol:VC_2259 "elongation factor Ts" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0006414 "translational
elongation" evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 PIR:A82100 RefSeq:NP_231890.1
ProteinModelPortal:Q9KPV3 PRIDE:Q9KPV3 DNASU:2613181 GeneID:2613181
KEGG:vch:VC2259 PATRIC:20083561 Uniprot:Q9KPV3
Length = 280
Score = 190 (71.9 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 51/119 (42%), Positives = 70/119 (58%)
Query: 268 GSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIEK 327
GS+ + LK V AMH+ A +P FLT + V A+ + ERE+ A + GKS EK
Sbjct: 156 GSADVETLKHV----AMHVAASRPEFLTPDDVPAEVVAKEREVQVGIAMNEGKSKEIAEK 211
Query: 328 MVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
MVEGR++K+ EV L Q FVM KT+ + L+ E G+ V +F R+EVGEGI +
Sbjct: 212 MVEGRMKKFTGEVSLTGQPFVMEPK---KTVGEILA-EKGATVS--AFIRLEVGEGIEK 264
Score = 189 (71.6 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 36/82 (43%), Positives = 57/82 (69%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQN 139
L+K+LRE+T A M + K ALV+ + DIE A++ +RK G A+KK+ A EG + + +
Sbjct: 7 LVKELRERTGAGMMECKKALVETNGDIELAIENMRKSGAAKAAKKAGNIAAEGTIMIKEG 66
Query: 140 ESKAAVIELNCETDFVSRNEIF 161
E AA++E+NC+TDFV+++ F
Sbjct: 67 EGIAALVEVNCQTDFVAKDSNF 88
Score = 44 (20.5 bits), Expect = 6.6e-16, Sum P(3) = 6.6e-16
Identities = 18/83 (21%), Positives = 35/83 (42%)
Query: 18 RLSAATNSKYGYSTCASKGTPVYQARQIKDLFSFKYLNPKSSFALISRNFSDQAPAATEQ 77
R S A + A++GT ++ + + + +N ++ F NF A T+
Sbjct: 41 RKSGAAKAAKKAGNIAAEGT--IMIKEGEGIAALVEVNCQTDFVAKDSNFVAFANQVTDA 98
Query: 78 VNLIKQLREQTSAPMKDVKLALV 100
K E+ A ++ ++ALV
Sbjct: 99 ALASKASVEELQAQFEEARVALV 121
Score = 39 (18.8 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 212 QNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLH 247
+ A + A +GEN+ +RR + + ++TY H
Sbjct: 114 EEARVALVAKIGENINIRRVQYVEGEA---LATYRH 146
>TIGR_CMR|CPS_1554 [details] [associations]
symbol:CPS_1554 "translation elongation factor Ts"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 RefSeq:YP_268296.1
ProteinModelPortal:Q485G9 SMR:Q485G9 STRING:Q485G9 PRIDE:Q485G9
GeneID:3522589 KEGG:cps:CPS_1554 PATRIC:21466315
BioCyc:CPSY167879:GI48-1635-MONOMER Uniprot:Q485G9
Length = 282
Score = 190 (71.9 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 34/82 (41%), Positives = 59/82 (71%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQN 139
++K+LRE+T+A M D K ALV+ + D+E A++ +RK G+ A+KK+ A EG + +
Sbjct: 7 MVKELRERTAAGMMDCKNALVEAEGDMELAIENMRKNGQAKAAKKAGNIAAEGAILIKTT 66
Query: 140 ESKAAVIELNCETDFVSRNEIF 161
+ AA++E+NC+TDFV++++ F
Sbjct: 67 DGLAALVEVNCQTDFVAKDDNF 88
Score = 179 (68.1 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 43/105 (40%), Positives = 59/105 (56%)
Query: 282 LAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVV 341
+AMH+ A KP FLT + V AD + NE+ I A + GK EKMV GR++K+ EV
Sbjct: 166 IAMHVAASKPEFLTPDDVPADVVANEKRIQIEMAMNEGKPQEIAEKMVTGRMKKFTGEVS 225
Query: 342 LMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
L Q F+M + IL E G + + +F R+EVGEGI +
Sbjct: 226 LTGQAFIMEPKKTVGVILT----EKG--ITVSNFVRLEVGEGIEK 264
>DICTYBASE|DDB_G0286399 [details] [associations]
symbol:tsfm "elongation factor Ts" species:44689
"Dictyostelium discoideum" [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
dictyBase:DDB_G0286399 GO:GO:0005739 GenomeReviews:CM000153_GR
GO:GO:0003746 EMBL:AAFI02000085 SUPFAM:SSF46934 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 RefSeq:XP_637727.1 ProteinModelPortal:Q54LV3
STRING:Q54LV3 EnsemblProtists:DDB0266366 GeneID:8625592
KEGG:ddi:DDB_G0286399 OMA:ILEMNSE ProtClustDB:CLSZ2846693
Uniprot:Q54LV3
Length = 355
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 91/348 (26%), Positives = 176/348 (50%)
Query: 62 LISRNFSDQAPAATE-QVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVL 120
L NF Q+ + + L+ QLR++T +P+++ K AL + D++ A+K L ++GK
Sbjct: 31 LKKNNFCTQSTSEVKVPTELVVQLRKKTQSPVQECKKALQASNNDMDGAIKWLLEKGKAT 90
Query: 121 ASKKSSRTATEGLLALA--QNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENV 178
A K SR + EG++++ KA ++E+N ETDFVSR +IF+ +
Sbjct: 91 AEKLKSRVSAEGIISVLVDSGSGKAVILEMNSETDFVSRGDIFRNLARDISKAT-----L 145
Query: 179 SQPVSG----------LFPVGPEYLEGLKLNLDHPK-IGGETTVQNAITEVAAIMGENVK 227
S P+SG L P E + +K+N+ + + E T++++I + + + EN+
Sbjct: 146 SNPISGGKLAENGILELDPTQVENIYPIKINITNEDGVAEEMTIKDSIVRIVSKLRENIV 205
Query: 228 LRRGFLLSA------SSPGVVSTYLH--TSPQSGLGRIAGLLSLEVEDGSSSFDPLKRVG 279
+RR + +S +S+Y H TS + +GR+ ++ E + ++ + LK
Sbjct: 206 IRRASFIQPLNNNNNNSKSYISSYAHDSTSEKKDVGRLGSIVQFEYQGDCNNMNSLKEFA 265
Query: 280 SELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEE 339
++LA+HIV+ P +T + + LE + ++ K+P ++ Y++
Sbjct: 266 NQLAIHIVSNSPSVVTVNDIPSSVLE--------ECKNNNKNPESL-----------YDD 306
Query: 340 VVLMEQKFVMNDTLNIKTILDNLSKEVG-SPVKIGSFFRMEVGEGIRR 386
+VL EQ ++ + ++K L+ LS+++G + + +F R +GE R
Sbjct: 307 MVLYEQSYMYSPDHSVKQYLEILSEKLGIKNLSVKTFRRYAIGETAER 354
>UNIPROTKB|P0A6P1 [details] [associations]
symbol:tsf species:83333 "Escherichia coli K-12"
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 GO:GO:0005737 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0003746 EMBL:U70214 SUPFAM:SSF46934 EMBL:D13334
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 EMBL:V00343 PIR:A03525
RefSeq:NP_414712.1 RefSeq:YP_488472.1 PDB:1EFU PDB:3MMP PDBsum:1EFU
PDBsum:3MMP ProteinModelPortal:P0A6P1 SMR:P0A6P1 DIP:DIP-31835N
IntAct:P0A6P1 MINT:MINT-1273899 PhosSite:P0810442
SWISS-2DPAGE:P0A6P1 PaxDb:P0A6P1 PRIDE:P0A6P1
EnsemblBacteria:EBESCT00000002436 EnsemblBacteria:EBESCT00000016027
GeneID:12931801 GeneID:944866 KEGG:ecj:Y75_p0166 KEGG:eco:b0170
PATRIC:32115449 EchoBASE:EB1026 EcoGene:EG11033
BioCyc:EcoCyc:EG11033-MONOMER BioCyc:ECOL316407:JW0165-MONOMER
EvolutionaryTrace:P0A6P1 Genevestigator:P0A6P1 Uniprot:P0A6P1
Length = 283
Score = 177 (67.4 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 33/84 (39%), Positives = 57/84 (67%)
Query: 79 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQ 138
+L+K+LRE+T A M D K AL + + DIE A++ +RK G + A+KK+ A +G++
Sbjct: 7 SLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKI 66
Query: 139 NESKAAVIELNCETDFVSRNEIFQ 162
+ + ++E+NC+TDFV+++ FQ
Sbjct: 67 DGNYGIILEVNCQTDFVAKDAGFQ 90
Score = 175 (66.7 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 45/105 (42%), Positives = 60/105 (57%)
Query: 282 LAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVV 341
+AMH+ A KP F+ E VSA+ +E E ++ A +GK EKMVEGR++K+ EV
Sbjct: 169 IAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVS 228
Query: 342 LMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
L Q FVM + KT+ L KE + V F R EVGEGI +
Sbjct: 229 LTGQPFVMEPS---KTV-GQLLKEHNAEVT--GFIRFEVGEGIEK 267
Score = 42 (19.8 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 218 VAAIMGENVKLRRGFLLSASSPGVVSTYLH 247
+ A +GEN+ +RR ++A V+ +Y H
Sbjct: 122 LVAKIGENINIRR---VAALEGDVLGSYQH 148
>TIGR_CMR|APH_0398 [details] [associations]
symbol:APH_0398 "translation elongation factor Ts"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:CP000235 GenomeReviews:CP000235_GR SUPFAM:SSF46934
RefSeq:YP_505003.1 ProteinModelPortal:Q2GKU8 STRING:Q2GKU8
GeneID:3930974 KEGG:aph:APH_0398 PATRIC:20949404 eggNOG:COG0264
HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
BioCyc:APHA212042:GHPM-426-MONOMER Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116 Uniprot:Q2GKU8
Length = 287
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 70/194 (36%), Positives = 110/194 (56%)
Query: 182 VSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGV 241
V GL+ G E LEG + G + V + I AA++GENV L + S PGV
Sbjct: 96 VRGLYGYGVEDLEGFSAS----SYDG-SRVADEIVAAAAVLGENVVLSGVGFVKLSGPGV 150
Query: 242 VSTYLHTSPQSGLGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSA 301
+ +Y+H GLG+ A L+ LE G D L +LAMHIVA KP L+ + +S+
Sbjct: 151 IGSYVHGMVSEGLGKAAALVVLE---GGPHSDELASFAKQLAMHIVAAKPEALSIDTLSS 207
Query: 302 DALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDN 361
D ++ ERE++ Q E+ GK +K++EGR++K++EE+VL+EQ FVM+ I+ +L
Sbjct: 208 DVVDRERELVARQVEALGKPDSVAQKIIEGRMQKFFEEMVLLEQVFVMDGQTKIRDLLVQ 267
Query: 362 LSKEVGSPVKIGSF 375
+ + ++I ++
Sbjct: 268 KGQSLKHEIRIAAY 281
Score = 167 (63.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 55/169 (32%), Positives = 82/169 (48%)
Query: 78 VNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALA 137
V +IK+LR+ T A + D K AL C D++ A + LR++G A KKS R +GL+A+
Sbjct: 5 VEVIKELRQITGAGIGDCKEALESCSGDMDKAREYLREKGLSKAYKKSHRDVADGLVAVF 64
Query: 138 QNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPVSGLFPVGPEYLEGLK 197
A+++L ETDFV+RNE F+ V GL+ G E LEG
Sbjct: 65 AEGDVGAILKLGSETDFVARNEKFRSLALGL-------------VRGLYGYGVEDLEGFS 111
Query: 198 LN-LDHPKIGGETTVQNAIT-EVAAIMGEN-VKLRRGFLLSASSPGVVS 243
+ D ++ E A+ E + G VKL ++ + G+VS
Sbjct: 112 ASSYDGSRVADEIVAAAAVLGENVVLSGVGFVKLSGPGVIGSYVHGMVS 160
>UNIPROTKB|Q10788 [details] [associations]
symbol:tsf "Elongation factor Ts" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0003746 EMBL:BX842581
SUPFAM:SSF46934 eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357
OMA:YLHGTRI ProtClustDB:PRK09377 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116 PIR:D70925
RefSeq:NP_217405.1 RefSeq:NP_337468.1 RefSeq:YP_006516342.1
ProteinModelPortal:Q10788 SMR:Q10788 PRIDE:Q10788
EnsemblBacteria:EBMYCT00000001377 EnsemblBacteria:EBMYCT00000071329
GeneID:13317682 GeneID:888187 GeneID:925323 KEGG:mtc:MT2957
KEGG:mtu:Rv2889c KEGG:mtv:RVBD_2889c PATRIC:18128272
TubercuList:Rv2889c Uniprot:Q10788
Length = 271
Score = 190 (71.9 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 55/176 (31%), Positives = 92/176 (52%)
Query: 207 GETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSGLGRIAGLLSLEVE 266
G+ TV+ AI E++A +GE ++LRR + G V YLH + L G+L +E
Sbjct: 113 GDKTVEQAIAELSAKIGEKLELRRVAIFD----GTVEAYLHRR-SADLPPAVGVL-VEYR 166
Query: 267 DGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIE 326
++ +A+ I A + +L+++ V D + +ER I + A + GK A+
Sbjct: 167 GDDAA------AAHAVALQIAALRARYLSRDDVPEDIVASERRIAEETARAEGKPEQALP 220
Query: 327 KMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGE 382
K+VEGRL ++++ VL+EQ V ++ +K +LD V V + F R EVG+
Sbjct: 221 KIVEGRLNGFFKDAVLLEQASVSDNKKTVKALLD-----VAG-VTVTRFVRFEVGQ 270
Score = 154 (59.3 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 81 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNE 140
+K+LRE T A M K AL + D D + A++ LR +G K++ R EGL+A A++
Sbjct: 9 VKRLRELTGAGMLACKNALAETDGDFDKAVEALRIKGAKDVGKRAERATAEGLVA-AKD- 66
Query: 141 SKAAVIELNCETDFVSRNEIFQ 162
A+IELNCETDFV++N FQ
Sbjct: 67 --GALIELNCETDFVAKNAEFQ 86
>TIGR_CMR|NSE_0947 [details] [associations]
symbol:NSE_0947 "translation elongation factor Ts"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005737 GO:GO:0003746 SUPFAM:SSF46934 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0264 HOGENOM:HOG000220986
KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
RefSeq:YP_506811.1 STRING:Q2GCI5 GeneID:3932029 KEGG:nse:NSE_0947
PATRIC:22681873 BioCyc:NSEN222891:GHFU-949-MONOMER Uniprot:Q2GCI5
Length = 290
Score = 196 (74.1 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 52/173 (30%), Positives = 88/173 (50%)
Query: 200 LDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSGLGRIAG 259
L P GG+ V++AI E A+ EN+ L R S G++ Y+H LG+I G
Sbjct: 112 LSTPLPGGQK-VRDAIVEQVAVFRENIVLSRCVTYEVSQSGLLGVYVHNKYTENLGKI-G 169
Query: 260 LLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTG 319
+ V + SF L V ++A+ ++++ P + + + LE+E+ K E G
Sbjct: 170 VAVAVVSEADPSF--LSTVAKDIAIQVMSECPCAIDVARIPPNLLESEKH--KYNLEVEG 225
Query: 320 KSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKI 372
K EK++ G+L K+Y++VVL+EQ + ++K + + KE+ S KI
Sbjct: 226 KPASVAEKIIAGKLSKFYKKVVLLEQPLFSDPERSVKQYISD--KEMESSAKI 276
Score = 151 (58.2 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 33/88 (37%), Positives = 55/88 (62%)
Query: 77 QVNL--IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLL 134
++NL +K L ++TSA + K AL + D+ A + L++ G ++ KK++R A +G++
Sbjct: 3 KINLEDLKSLSKETSAGLVHCKQALSEAHGDLTRAREILKELGHAVSVKKANRGARDGVV 62
Query: 135 ALAQNESKAAVIELNCETDFVSRNEIFQ 162
+ ++ELNCETDFV+RNE FQ
Sbjct: 63 GALSSGKFGVILELNCETDFVARNEKFQ 90
>TIGR_CMR|CHY_1786 [details] [associations]
symbol:CHY_1786 "translation elongation factor Ts"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
RefSeq:YP_360606.1 ProteinModelPortal:Q3AB78 SMR:Q3AB78
STRING:Q3AB78 PRIDE:Q3AB78 GeneID:3728651 KEGG:chy:CHY_1786
PATRIC:21276683 OMA:YIHTGAR ProtClustDB:PRK12332
BioCyc:CHYD246194:GJCN-1785-MONOMER Uniprot:Q3AB78
Length = 217
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 58/151 (38%), Positives = 89/151 (58%)
Query: 237 SSPGVVSTYLHTSPQSGLGRIAGLLSLEVE-DGSSSFDPLKRVGSELAMHIVAQKPLFLT 295
++ GVV Y+H G GRI L+ + E D + D K ++AM I A KP ++
Sbjct: 55 ATEGVVEAYIH-----GGGRIGVLVEINCETDFVAKTDEFKSFARDIAMQIAAAKPEYVR 109
Query: 296 KELVSADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNI 355
+E V + +E EREIL++QA + GK +EKMVEGRL K+++EV L+EQ F+ N + +
Sbjct: 110 REDVPQEVIEKEREILRAQALNEGKPANVVEKMVEGRLEKFFKEVCLLEQPFIKNPDITV 169
Query: 356 KTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
K +L ++G + I F R E+GEG+ +
Sbjct: 170 KDLLTEKIAKIGENINIRRFVRFELGEGLAK 200
Score = 172 (65.6 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 36/85 (42%), Positives = 58/85 (68%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLL-ALAQ 138
++K+LRE+T A M D K AL + + D+E A++ LR++G A+KK+ R ATEG++ A
Sbjct: 6 MVKELRERTGAGMMDCKRALEEANGDMEKAIEILRQKGLAAAAKKAGRIATEGVVEAYIH 65
Query: 139 NESKAAV-IELNCETDFVSRNEIFQ 162
+ V +E+NCETDFV++ + F+
Sbjct: 66 GGGRIGVLVEINCETDFVAKTDEFK 90
Score = 57 (25.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 200 LDHPKIGG-ETTVQNAITEVAAIMGENVKLRR 230
L+ P I + TV++ +TE A +GEN+ +RR
Sbjct: 157 LEQPFIKNPDITVKDLLTEKIAKIGENINIRR 188
>TIGR_CMR|SO_1630 [details] [associations]
symbol:SO_1630 "translation elongation factor Ts"
species:211586 "Shewanella oneidensis MR-1" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:AE014299 GenomeReviews:AE014299_GR SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 RefSeq:NP_717241.1
ProteinModelPortal:Q8EGH4 SMR:Q8EGH4 PRIDE:Q8EGH4 GeneID:1169424
KEGG:son:SO_1630 PATRIC:23522894 Uniprot:Q8EGH4
Length = 283
Score = 167 (63.8 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 81 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNE 140
+K+LRE+T A M D K AL + + D+E A+ +RK G A+KK+ A +G + + E
Sbjct: 8 VKELRERTGAGMMDCKKALEETNGDMELAIDNMRKSGAAKAAKKAGNIAADGTILIKNGE 67
Query: 141 SKAAVIELNCETDFVSRNEIF 161
A ++E+NC+TDFV+++ F
Sbjct: 68 GFAVLLEVNCQTDFVAKDANF 88
Score = 158 (60.7 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 40/105 (38%), Positives = 61/105 (58%)
Query: 282 LAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVV 341
LAMH+ A KP ++ E V AD + E+ + + + GK EKMV GR++K+ E+
Sbjct: 166 LAMHVAASKPEYVNPEDVPADVVAREQALQIEISMNEGKPADIAEKMVVGRMKKFTGEIS 225
Query: 342 LMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
L Q ++M KT+ + L KE G+ K+ +F R+EVGEGI +
Sbjct: 226 LTGQAYIMEPK---KTVGEFL-KEKGA--KVTNFIRLEVGEGIEK 264
Score = 38 (18.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 54 LNPKSSFALISRNFSDQAPAATEQVNLIKQLREQTSAPMKDVKLALV 100
+N ++ F NF A A + K E A ++ ++ALV
Sbjct: 75 VNCQTDFVAKDANFLGFANAVLDVAAASKVTLEDLKAQFEEARVALV 121
>TAIR|locus:2119946 [details] [associations]
symbol:emb2726 "embryo defective 2726" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR003029
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00575 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 PROSITE:PS50126 GO:GO:0046686 GO:GO:0009570
EMBL:CP002687 EMBL:AL078470 EMBL:AL161574 GO:GO:0009941
GO:GO:0003746 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
SUPFAM:SSF46934 InterPro:IPR022967 SMART:SM00316 KO:K02357
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HSSP:P43895 EMBL:AY056792 IPI:IPI00541725
PIR:T08961 RefSeq:NP_567820.1 UniGene:At.21764
ProteinModelPortal:Q9SZD6 SMR:Q9SZD6 STRING:Q9SZD6 PRIDE:Q9SZD6
ProMEX:Q9SZD6 EnsemblPlants:AT4G29060.1 GeneID:829027
KEGG:ath:AT4G29060 TAIR:At4g29060 HOGENOM:HOG000244107
InParanoid:Q9SZD6 OMA:DDLAMQV PhylomeDB:Q9SZD6
Genevestigator:Q9SZD6 Uniprot:Q9SZD6
Length = 953
Score = 189 (71.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 44/92 (47%), Positives = 57/92 (61%)
Query: 72 PAATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATE 131
P L+KQLRE+T A M D K AL D+E A + LRK+G A KKSSR A+E
Sbjct: 753 PTTVVSAALVKQLREETGAGMMDCKKALAATGGDLEKAQEFLRKKGLSSADKKSSRLASE 812
Query: 132 GLLALAQNESKAAV-IELNCETDFVSRNEIFQ 162
G + ++S+ V IE+NCETDFV R+E F+
Sbjct: 813 GRIGSYIHDSRIGVLIEVNCETDFVGRSEKFK 844
Score = 185 (70.2 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQN 139
L+KQLRE+T A M D K AL + + D+ A + LRK+G A KK+SR +EG + +
Sbjct: 523 LVKQLREETGAGMMDCKNALSESEGDMVKAQEYLRKKGLASADKKASRATSEGRIGAYIH 582
Query: 140 ESKAAVI-ELNCETDFVSRNEIFQ 162
+S+ V+ E+NCETDFVSR +IF+
Sbjct: 583 DSRIGVLLEVNCETDFVSRGDIFK 606
Score = 177 (67.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 45/153 (29%), Positives = 80/153 (52%)
Query: 236 ASSPGVVSTYLHTSPQSGLGRIAGLLSLEVE-DGSSSFDPLKRVGSELAMHIVAQKPL-F 293
A+S G + Y+H S RI LL + E D S D K + +LAM + A + +
Sbjct: 571 ATSEGRIGAYIHDS------RIGVLLEVNCETDFVSRGDIFKELVDDLAMQVAACPQVEY 624
Query: 294 LTKELVSADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTL 353
L E VS + ++ E+EI + + K EK+V+GR++K + + L+EQ ++ +D +
Sbjct: 625 LVTEDVSEEIVKKEKEIEMQKEDLLSKPEQIREKIVDGRIKKRLDSLALLEQPYIKDDKV 684
Query: 354 NIKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
+K ++ +G +K+ F R +GEG+ +
Sbjct: 685 IVKDLVKQRIATIGENIKVKRFVRYTLGEGLEK 717
Score = 143 (55.4 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 42/149 (28%), Positives = 76/149 (51%)
Query: 237 SSPGVVSTYLHTSPQSGLGRIAGLLSLEVE-DGSSSFDPLKRVGSELAMHIVAQKPL-FL 294
+S G + +Y+H S RI L+ + E D + K + +LAM VA + ++
Sbjct: 810 ASEGRIGSYIHDS------RIGVLIEVNCETDFVGRSEKFKELVDDLAMQAVANPQVQYV 863
Query: 295 TKELVSADALENEREILKSQAESTGKSPMAI-EKMVEGRLRKYYEEVVLMEQKFVMNDTL 353
+ E + + + E+EI + Q E P I EK+VEGR+ K E L+EQ ++ +D++
Sbjct: 864 SIEDIPEEIKQKEKEI-EMQREDLLSKPENIREKIVEGRISKRLGEWALLEQPYIKDDSV 922
Query: 354 NIKTILDNLSKEVGSPVKIGSFFRMEVGE 382
+K ++ +G +K+ F + +GE
Sbjct: 923 LVKDLVKQTVATLGENIKVRRFVKFTLGE 951
Score = 56 (24.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 200 LDHPKIGGETT-VQNAITEVAAIMGENVKLRR 230
L+ P I ++ V++ + + A +GEN+K+RR
Sbjct: 912 LEQPYIKDDSVLVKDLVKQTVATLGENIKVRR 943
Score = 50 (22.7 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 193 LEGLKLNLDHPKIGGETT-VQNAITEVAAIMGENVKLRR 230
L+ L L L+ P I + V++ + + A +GEN+K++R
Sbjct: 668 LDSLAL-LEQPYIKDDKVIVKDLVKQRIATIGENIKVKR 705
>TIGR_CMR|GSU_1920 [details] [associations]
symbol:GSU_1920 "translation elongation factor Ts"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
ProtClustDB:PRK12332 RefSeq:NP_952969.1 ProteinModelPortal:P61333
SMR:P61333 GeneID:2685331 KEGG:gsu:GSU1920 PATRIC:22026705
OMA:EAREGII BioCyc:GSUL243231:GH27-1977-MONOMER Uniprot:P61333
Length = 216
Score = 235 (87.8 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 50/152 (32%), Positives = 85/152 (55%)
Query: 236 ASSPGVVSTYLHTSPQSGLGRIAGLLSLEVE-DGSSSFDPLKRVGSELAMHIVAQKPLFL 294
A++ G V +Y+H G+I L+ + E D + D + ++AMHI A P ++
Sbjct: 55 AATEGAVGSYIHAG-----GKIGVLVEVNCETDFVARNDNFQAFVKDIAMHIAAASPQYV 109
Query: 295 TKELVSADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLN 354
+E V A+ LE E+EI +++A TGK IEK++EG++ K+Y E+ LMEQ FV +
Sbjct: 110 RREEVPAELLEREKEIYRAKARETGKPENIIEKIIEGQINKFYAEICLMEQNFVKDPDKT 169
Query: 355 IKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
++ L+ +G + + F R +GEG+ +
Sbjct: 170 VQQFLNETISSIGENMSVRRFARFVLGEGLEK 201
Score = 170 (64.9 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 38/84 (45%), Positives = 54/84 (64%)
Query: 81 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLL-ALAQN 139
+ +LR+ T A + D K AL + + D+E A+ LRK+G ASKK+ R ATEG + +
Sbjct: 8 VNELRKITGAGLMDCKKALTETNGDLEQAVDYLRKKGLAAASKKAGRAATEGAVGSYIHA 67
Query: 140 ESKAAV-IELNCETDFVSRNEIFQ 162
K V +E+NCETDFV+RN+ FQ
Sbjct: 68 GGKIGVLVEVNCETDFVARNDNFQ 91
Score = 48 (22.0 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 208 ETTVQNAITEVAAIMGENVKLRR 230
+ TVQ + E + +GEN+ +RR
Sbjct: 167 DKTVQQFLNETISSIGENMSVRR 189
>GENEDB_PFALCIPARUM|PFC0225c [details] [associations]
symbol:PFC0225c "elongation factor (EF-TS),
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0003746 SUPFAM:SSF46934 EMBL:AL844502
GO:GO:0020011 eggNOG:COG0264 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 OMA:ILEMNSE RefSeq:XP_001351126.1
ProteinModelPortal:O97235 EnsemblProtists:PFC0225c:mRNA
GeneID:814368 KEGG:pfa:PFC0225c EuPathDB:PlasmoDB:PF3D7_0305000
HOGENOM:HOG000284141 ProtClustDB:CLSZ2432189 Uniprot:O97235
Length = 390
Score = 156 (60.0 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 35/180 (19%), Positives = 89/180 (49%)
Query: 209 TTVQNAITEVAAIMGENVKLRRGFLLSASSPG-VVSTYLHTSPQSGLGRIAGLLSLEV-- 265
+T++ + + I E++K+ R S +P + Y+H +G LL L +
Sbjct: 205 STMREQLNYLRNIFREDIKIGRFSKYSKKNPNEFLHYYIHNKLDDHVGLSGVLLVLHINN 264
Query: 266 --EDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPM 323
E + + + ++L+MHI++ KP ++ + ++ + E +I++ + K
Sbjct: 265 LDEILKTKKEDIVNFANDLSMHIISAKPASVSIDTLNPKITKKEMDIIRDGLKDMKKPEN 324
Query: 324 AIEKMVEGRLRKYYEEVVLMEQKFVMNDTLN-IKTILDNLSKEVGSPVKIGSFFRMEVGE 382
+ M++G+++K+Y +V +EQ++++++T + ++ + K+ + + F +GE
Sbjct: 325 ILNNMIQGKMKKFYSSIVFLEQEYMLDETKRKVSQVIKDFGKDHNINISVNHFNYFAIGE 384
Score = 123 (48.4 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 27/87 (31%), Positives = 53/87 (60%)
Query: 76 EQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSS-RTATEGLL 134
+ + L+K +RE T+A ++ AL +C+ D++ A++ +RK K ++ + EGL+
Sbjct: 55 DHLKLLKYVREVTNASIQLCNKALKECNNDVDKAIEHVRKNTKSSTFVSTNIKVKKEGLV 114
Query: 135 ALAQNESKAAVIELNCETDFVSRNEIF 161
A + K ++EL ++DFV+RN++F
Sbjct: 115 ASQIKDDKIVLLELLTDSDFVARNKMF 141
>UNIPROTKB|O97235 [details] [associations]
symbol:PFC0225c "Elongation factor Ts, mitochondrial"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005739 GO:GO:0003746
SUPFAM:SSF46934 EMBL:AL844502 GO:GO:0020011 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
OMA:ILEMNSE RefSeq:XP_001351126.1 ProteinModelPortal:O97235
EnsemblProtists:PFC0225c:mRNA GeneID:814368 KEGG:pfa:PFC0225c
EuPathDB:PlasmoDB:PF3D7_0305000 HOGENOM:HOG000284141
ProtClustDB:CLSZ2432189 Uniprot:O97235
Length = 390
Score = 156 (60.0 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 35/180 (19%), Positives = 89/180 (49%)
Query: 209 TTVQNAITEVAAIMGENVKLRRGFLLSASSPG-VVSTYLHTSPQSGLGRIAGLLSLEV-- 265
+T++ + + I E++K+ R S +P + Y+H +G LL L +
Sbjct: 205 STMREQLNYLRNIFREDIKIGRFSKYSKKNPNEFLHYYIHNKLDDHVGLSGVLLVLHINN 264
Query: 266 --EDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPM 323
E + + + ++L+MHI++ KP ++ + ++ + E +I++ + K
Sbjct: 265 LDEILKTKKEDIVNFANDLSMHIISAKPASVSIDTLNPKITKKEMDIIRDGLKDMKKPEN 324
Query: 324 AIEKMVEGRLRKYYEEVVLMEQKFVMNDTLN-IKTILDNLSKEVGSPVKIGSFFRMEVGE 382
+ M++G+++K+Y +V +EQ++++++T + ++ + K+ + + F +GE
Sbjct: 325 ILNNMIQGKMKKFYSSIVFLEQEYMLDETKRKVSQVIKDFGKDHNINISVNHFNYFAIGE 384
Score = 123 (48.4 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 27/87 (31%), Positives = 53/87 (60%)
Query: 76 EQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSS-RTATEGLL 134
+ + L+K +RE T+A ++ AL +C+ D++ A++ +RK K ++ + EGL+
Sbjct: 55 DHLKLLKYVREVTNASIQLCNKALKECNNDVDKAIEHVRKNTKSSTFVSTNIKVKKEGLV 114
Query: 135 ALAQNESKAAVIELNCETDFVSRNEIF 161
A + K ++EL ++DFV+RN++F
Sbjct: 115 ASQIKDDKIVLLELLTDSDFVARNKMF 141
>TIGR_CMR|CBU_1385 [details] [associations]
symbol:CBU_1385 "translation elongation factor Ts"
species:227377 "Coxiella burnetii RSA 493" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:AE016828 GenomeReviews:AE016828_GR SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 EMBL:AF127534
RefSeq:NP_820374.1 ProteinModelPortal:Q9X5U9 SMR:Q9X5U9
PRIDE:Q9X5U9 GeneID:1209291 KEGG:cbu:CBU_1385 PATRIC:17931515
BioCyc:CBUR227377:GJ7S-1373-MONOMER Uniprot:Q9X5U9
Length = 296
Score = 214 (80.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 64/178 (35%), Positives = 96/178 (53%)
Query: 209 TTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSGLGRIAGLLSLEVEDG 268
+T+++ + +GEN+++RR + S SS GVV Y H G GRI LL+L+V
Sbjct: 124 STIEDERKALVNRIGENIQIRR--VASLSSDGVVGHYSH-----G-GRIGVLLALDV--- 172
Query: 269 SSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIEKM 328
P + LAMH+ A P ++ VS + +E E+EI ++A+ TGK IEKM
Sbjct: 173 -----PNPELAKGLAMHVAAFNPQAVSANQVSTEFVEKEKEIFLARAQETGKPANIIEKM 227
Query: 329 VEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386
V+G++ K +EV L Q FV + K + D L E K+ +F R EVGEG+ +
Sbjct: 228 VKGQVEKLLKEVSLEGQSFVKDPE---KLVGDLLKAE---KAKVLAFLRFEVGEGVEK 279
Score = 195 (73.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 66/245 (26%), Positives = 121/245 (49%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLL--ALA 137
++K+LRE+T A + K AL + + D+EAA+ LRK G A+K++ +TA EG++ A++
Sbjct: 8 MVKELRERTGAAVMACKKALQETNGDMEAAIDLLRKAGDAKAAKRAGKTAAEGVIVIAIS 67
Query: 138 QNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPVSGL-FPVGPEYLEGL 196
+++ K + E+N ETDFV+R+ F E VS + L P+ P
Sbjct: 68 KDQKKGFMAEVNSETDFVARDTNFM-AFASKVAERGLAEGVSDVAATLALPIEPN----- 121
Query: 197 KLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSGLGR 256
+T+++ + +GEN+++RR + S SS GVV Y H + G+
Sbjct: 122 ----------SSSTIEDERKALVNRIGENIQIRR--VASLSSDGVVGHYSHGG-RIGVLL 168
Query: 257 IAGLLSLEVEDGSS----SFDPLKRVGSELAMHIVA-QKPLFLTKELVSADALENEREIL 311
+ + E+ G + +F+P ++++ V +K +FL + + +++
Sbjct: 169 ALDVPNPELAKGLAMHVAAFNPQAVSANQVSTEFVEKEKEIFLARAQETGKPANIIEKMV 228
Query: 312 KSQAE 316
K Q E
Sbjct: 229 KGQVE 233
>ZFIN|ZDB-GENE-061215-17 [details] [associations]
symbol:tsfm "Ts translation elongation factor,
mitochondrial" species:7955 "Danio rerio" [GO:0003746 "translation
elongation factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01127 ZFIN:ZDB-GENE-061215-17 GO:GO:0005622 GO:GO:0003746
SUPFAM:SSF46934 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 HOGENOM:HOG000220988
HOVERGEN:HBG005571 EMBL:BC152076 IPI:IPI00829007 UniGene:Dr.84965
STRING:A7MC80 ArrayExpress:A7MC80 Uniprot:A7MC80
Length = 311
Score = 213 (80.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 71/233 (30%), Positives = 112/233 (48%)
Query: 72 PAATEQVNLIKQLREQTSAPMKDVKLALVDCDWDI---EAALKE-LRKRGKVLASKKSSR 127
P+ L+ Q R+ T + K AL C+ DI E+ L E +K G A+K R
Sbjct: 37 PSLAADKALLLQPRKSTGYTFVNCKKALEKCNNDITQAESWLHEQAKKEGWSKATKLEGR 96
Query: 128 TATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPVSGLFP 187
A EGL+ L +++ A ++E+NCETDFV+RNE FQ ++ S+ +
Sbjct: 97 KAKEGLIGLMMHDNAAVMVEVNCETDFVARNEKFQQLVKDVALSVMAHQSTSKKTGFIKS 156
Query: 188 V-GPEYLEGLKLNL-DHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTY 245
V E + KLN D P + Q A+T +GEN+ +RR LS S + +Y
Sbjct: 157 VLSSEDMS--KLNAPDGPSLAD----QLALT--IGRLGENIAMRRAVSLSVPSDWHIGSY 208
Query: 246 LH--TSPQSGL--GRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPLFL 294
+H + Q G+ GR L+ + E ++ +G +LA H++ + P+ L
Sbjct: 209 IHGTVAGQVGIEMGRYGSLVVFQGEPKEGTY----ALGRKLAQHVMGEAPVSL 257
>RGD|1593058 [details] [associations]
symbol:Tsfm "Ts translation elongation factor, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003746 "translation
elongation factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
RGD:1593058 GO:GO:0005739 GO:GO:0003746 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HOVERGEN:HBG005571 EMBL:AJ005161 IPI:IPI00555157
ProteinModelPortal:Q9QYU2 SMR:Q9QYU2 PRIDE:Q9QYU2
Genevestigator:Q9QYU2 Uniprot:Q9QYU2
Length = 324
Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 71/250 (28%), Positives = 117/250 (46%)
Query: 54 LNPKSSFALISRNFSDQAPAATEQVNLIKQLREQTSAPMKDVKLALVDCDWDI---EAAL 110
L P + + S + A++++ L+ +LR T + K AL C D+ EA L
Sbjct: 24 LQPSQPWHTLHAGPSLSSSASSKE--LLMKLRRTTGYSFVNCKKALETCGGDLKQAEAWL 81
Query: 111 -KELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXX 169
K+ +K G A+K R EGL+ L Q E+ A ++E+NCETDFVSRN FQ
Sbjct: 82 HKQAQKEGWSKAAKLHGRKTKEGLIGLLQEENTAVLVEVNCETDFVSRNVKFQQLVQQVA 141
Query: 170 XXXXXX-ENVSQPVSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKL 228
+N++ +S + G +L +L+ GE ++++ + +GEN+ L
Sbjct: 142 LGTMAHCQNLTDQLS-TYSKG--FLNSSELSELAAGPDGEGSLKDQLALAIGTLGENMSL 198
Query: 229 RRGFLLSASSPGVVSTYLHTSPQSG------LGRIAGLLSLEVEDGSSSFDPLKRVGSEL 282
+R + S V +Y+H QS LG+ L+ + + ++ L+ VG L
Sbjct: 199 KRAAWVKVPSGFYVGSYVHGEMQSPSLQNLVLGKYGALVICQTPEQITN---LEEVGRRL 255
Query: 283 AMHIVAQKPL 292
H+V PL
Sbjct: 256 GQHVVGMAPL 265
>TIGR_CMR|CJE_1315 [details] [associations]
symbol:CJE_1315 "translation elongation factor Ts"
species:195099 "Campylobacter jejuni RM1221" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:CP000025 GenomeReviews:CP000025_GR SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 RefSeq:YP_179302.1
ProteinModelPortal:Q5HTT3 STRING:Q5HTT3 GeneID:3231822
KEGG:cjr:CJE1315 PATRIC:20044430
BioCyc:CJEJ195099:GJC0-1341-MONOMER Uniprot:Q5HTT3
Length = 357
Score = 208 (78.3 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 83/279 (29%), Positives = 133/279 (47%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQN 139
++K+LRE T A M D K AL + + D + A++ LR++G A+KK+ R A EGL+++ +
Sbjct: 8 MVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREKGLGKAAKKADRLAAEGLVSVKVS 67
Query: 140 E--SKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPVSGLFPVGPEYLEGLK 197
+ + A V E+N ETDFV++N+ Q+ N Q V L + G+K
Sbjct: 68 DDFTSATVSEINSETDFVAKND--QFIALTKDTTAHIQSNSLQSVEELHS---STINGVK 122
Query: 198 LNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSGLGRI 257
++ K +++A I GEN+ +RR L A + GVV+ Y+HT+ + G+
Sbjct: 123 FE-EYLK-----------SQIATI-GENLVVRRFATLKAGANGVVNGYIHTNGRVGVVIA 169
Query: 258 AGLLSLEVEDGSSSF--DPLKRVGSELAMHIVAQKPLFLT------KELVSADALENE-R 308
A S EV S + + ++ + + L +T K LV+ ENE R
Sbjct: 170 AACDSTEVASKSRDLLRQICMHIAAMRPSYL-SYEDLDMTFVENEYKALVAELEKENEER 228
Query: 309 EILKSQAESTGKSPM-AIEKMVEGRLRKYYEEVVLMEQK 346
LK + K P A K + + K EE + E K
Sbjct: 229 RRLKDPNKPEHKIPQFASRKQLSDAILKEAEEKIKEELK 267
>MGI|MGI:1913649 [details] [associations]
symbol:Tsfm "Ts translation elongation factor,
mitochondrial" species:10090 "Mus musculus" [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 MGI:MGI:1913649 GO:GO:0005739
GO:GO:0005634 GO:GO:0003746 SUPFAM:SSF46934 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
CTD:10102 GeneTree:ENSGT00390000016293 HOGENOM:HOG000220988
HOVERGEN:HBG005571 OMA:FANCKKA EMBL:AK012240 EMBL:AK169164
EMBL:BC057904 IPI:IPI00113052 RefSeq:NP_079813.1 UniGene:Mm.29900
ProteinModelPortal:Q9CZR8 SMR:Q9CZR8 STRING:Q9CZR8
PhosphoSite:Q9CZR8 PaxDb:Q9CZR8 PRIDE:Q9CZR8
Ensembl:ENSMUST00000040560 GeneID:66399 KEGG:mmu:66399
UCSC:uc007hhm.1 InParanoid:Q9CZR8 ChiTaRS:TSFM NextBio:321563
Bgee:Q9CZR8 CleanEx:MM_TSFM Genevestigator:Q9CZR8
GermOnline:ENSMUSG00000040521 Uniprot:Q9CZR8
Length = 324
Score = 192 (72.6 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 65/231 (28%), Positives = 106/231 (45%)
Query: 73 AATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAAL----KELRKRGKVLASKKSSRT 128
+A L+ +LR +T + K AL C D++ A K+ +K G A+K R
Sbjct: 41 SAASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEDWLHKQAQKEGWSKAAKLHGRK 100
Query: 129 ATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXX-ENVSQPVSGLFP 187
EGL+ L Q + A ++E+NCETDFVSRN FQ +N++ +S +
Sbjct: 101 TKEGLIGLLQEGNTAVLVEVNCETDFVSRNLKFQQLVQQVALGTMAHCQNLTDRLS-TYS 159
Query: 188 VGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLH 247
G +L +L+ E ++++ + +GEN+ L+R + S V +Y+H
Sbjct: 160 KG--FLNSSELSELAAGPDREGSLKDQLALAIGKLGENMILKRAAWVKVPSGFYVGSYVH 217
Query: 248 TSPQSG------LGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPL 292
QS LG+ L+ E + ++ L+ VG L H+V PL
Sbjct: 218 GVTQSPSLQNLVLGKYGALVICETPEQIAN---LEEVGRRLGQHVVGMAPL 265
>UNIPROTKB|P43897 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0032784 "regulation of
DNA-dependent transcription, elongation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0005634 EMBL:CH471054 GO:GO:0003746
EMBL:AC025165 SUPFAM:SSF46934 GO:GO:0006414 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
CTD:10102 HOGENOM:HOG000220988 HOVERGEN:HBG005571 OMA:FANCKKA
OrthoDB:EOG48PMKQ EMBL:AF110399 EMBL:AK304621 EMBL:AK308981
EMBL:BC022862 EMBL:BC093068 EMBL:L37936 IPI:IPI00021016
IPI:IPI00216260 IPI:IPI00916152 IPI:IPI00956590 PIR:I84606
RefSeq:NP_001166166.1 RefSeq:NP_001166167.1 RefSeq:NP_001166168.1
RefSeq:NP_005717.3 UniGene:Hs.632704 PDB:2CP9 PDBsum:2CP9
ProteinModelPortal:P43897 SMR:P43897 IntAct:P43897
MINT:MINT-3297563 STRING:P43897 PhosphoSite:P43897 DMDM:12644268
PaxDb:P43897 PRIDE:P43897 Ensembl:ENST00000323833
Ensembl:ENST00000454289 Ensembl:ENST00000540550
Ensembl:ENST00000543727 GeneID:10102 KEGG:hsa:10102 UCSC:uc001sqh.3
UCSC:uc001sqi.3 GeneCards:GC12P058176 HGNC:HGNC:12367 HPA:HPA006204
MIM:604723 MIM:610505 neXtProt:NX_P43897 Orphanet:168566
PharmGKB:PA37037 EvolutionaryTrace:P43897 GenomeRNAi:10102
NextBio:38213 ArrayExpress:P43897 Bgee:P43897 CleanEx:HS_TSFM
Genevestigator:P43897 GermOnline:ENSG00000123297 GO:GO:0032784
Uniprot:P43897
Length = 325
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 65/233 (27%), Positives = 100/233 (42%)
Query: 73 AATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAAL----KELRKRGKVLASKKSSRT 128
A+ L+ +LR +T + K AL C D++ A KE +K G A+K R
Sbjct: 42 ASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRK 101
Query: 129 ATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPVSGLFPV 188
EGL+ L Q + ++E+NCETDFVSRN FQ + +
Sbjct: 102 TKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKDQPSAYSK 161
Query: 189 G---PEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTY 245
G L GL D E ++++ + +GEN+ L+R + S V +Y
Sbjct: 162 GFLNSSELSGLPAGPDR-----EGSLKDQLALAIGKLGENMILKRAAWVKVPSGFYVGSY 216
Query: 246 LHTSPQSG------LGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPL 292
+H + QS LG+ L+ E + ++ L+ VG L H+V PL
Sbjct: 217 VHGAMQSPSLHKLVLGKYGALVICETSEQKTN---LEDVGRRLGQHVVGMAPL 266
>POMBASE|SPBC800.07c [details] [associations]
symbol:tsf1 "mitochondrial translation elongation factor
EF-Ts Tsf1" species:4896 "Schizosaccharomyces pombe" [GO:0003746
"translation elongation factor activity" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005759 "mitochondrial
matrix" evidence=IGI] [GO:0006414 "translational elongation"
evidence=IGI] [GO:0032543 "mitochondrial translation" evidence=NAS]
HAMAP:MF_00050 InterPro:IPR001816 InterPro:IPR014039 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 PomBase:SPBC800.07c GO:GO:0005525
GO:GO:0005759 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003746
GO:GO:0005085 GO:GO:0032543 eggNOG:COG0264 KO:K02357
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
RefSeq:NP_595108.1 HSSP:P43895 ProteinModelPortal:Q9HGL5
STRING:Q9HGL5 EnsemblFungi:SPBC800.07c.1 GeneID:2540692
KEGG:spo:SPBC800.07c OrthoDB:EOG49W5R5 NextBio:20801816
Uniprot:Q9HGL5
Length = 299
Score = 131 (51.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 37/107 (34%), Positives = 62/107 (57%)
Query: 63 ISRNFSDQAPAATEQVNLIKQLREQTSAPMKDVKLALVDCD-WDIEAALKELRK----RG 117
+SR + + P+ IK+LR +T+A M VK ++ + ++E A + L+K RG
Sbjct: 22 LSRQWYSKLPSKLAD---IKKLRSETNASMDLVKQSVEEAGVGNLELAREILKKKIVQRG 78
Query: 118 KVLASKKSSRTATEGLL--ALAQNESKAAVIELNCETDFVSRNEIFQ 162
LA K +RTA EG + ++++ KA + E+NCE+DFV++ FQ
Sbjct: 79 GKLAEKSKNRTAKEGWIIQCISEDGRKAVMAEINCESDFVAQTTPFQ 125
Score = 94 (38.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 205 IGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGV-VSTYLH----TSPQSGLGRIAG 259
+ +++ I ++ + GE V+++R ++A P + + H +SP LGRI
Sbjct: 174 VSSNVSLEEEIVKMTSFTGEKVQVQRLHCMNARVPSTAIGIFSHGAKQSSPLQQLGRIGS 233
Query: 260 LLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADAL-ENEREILKSQAEST 318
++ + +S K + +++A IVAQ P T EL+S +L ++E+ I +ST
Sbjct: 234 MVQI-----NSDLSTRKGLSNQIAKEIVAQDPSS-TSELLSFRSLVDSEKTIKDVLGQST 287
>TIGR_CMR|DET_0376 [details] [associations]
symbol:DET_0376 "translation elongation factor Ts,
putative" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746 EMBL:CP000027
GenomeReviews:CP000027_GR SUPFAM:SSF46934 eggNOG:COG0264
HOGENOM:HOG000220986 KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 ProtClustDB:PRK12332 OMA:EAREGII
RefSeq:YP_181122.1 ProteinModelPortal:Q3Z9H7 STRING:Q3Z9H7
GeneID:3230302 KEGG:det:DET0376 PATRIC:21607821
BioCyc:DETH243164:GJNF-376-MONOMER Uniprot:Q3Z9H7
Length = 167
Score = 161 (61.7 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 50/162 (30%), Positives = 85/162 (52%)
Query: 81 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLL-ALAQN 139
IK+LRE+ A + + + AL+D + ++E A + LR++G V A+KK+ R +G++ +
Sbjct: 8 IKELREKCGAGVMECRNALMDSNGNVEKAQEILREKGLVKAAKKAERETVQGIVESYIHT 67
Query: 140 ESK-AAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPVSGLFPV------GPEY 192
+ + A++ELNCETDFV+R + F+ N++ V+ + P+ P
Sbjct: 68 QGRIGALVELNCETDFVARTDAFK----------ELAHNLAMQVAAMCPLYLSEEDRPAE 117
Query: 193 LEGLKLN---LDHPKIGG-ETTVQNAITEVAAIMGENVKLRR 230
E N L P I T+ I E A +GEN++L+R
Sbjct: 118 CEVEAENACLLLQPYIKDLSKTINGLIIETVAKVGENIRLKR 159
>UNIPROTKB|F1PBM5 [details] [associations]
symbol:METTL21B "Elongation factor Ts" species:9615 "Canis
lupus familiaris" [GO:0003746 "translation elongation factor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005622 GO:GO:0003746 SUPFAM:SSF46934 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 OMA:FANCKKA
GeneTree:ENSGT00550000074572 EMBL:AAEX03006960 EMBL:AAEX03006959
Ensembl:ENSCAFT00000000451 Uniprot:F1PBM5
Length = 321
Score = 178 (67.7 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 62/224 (27%), Positives = 101/224 (45%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAAL----KELRKRGKVLASKKSSRTATEGLLA 135
L+K LR +T + K AL C D++ A K+ +K G A+K R EGL+
Sbjct: 46 LVK-LRRRTGYSFVNCKKALEACGGDLKQAESWLHKQAQKEGWSRAAKLHGRKTKEGLIG 104
Query: 136 LAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXX-ENVSQPVSGLFPVGPEYLE 194
L Q+ + ++E+NCETDFVSRN FQ +N+ +S + G +L
Sbjct: 105 LLQDGNATVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQNLKDQLS-TYSKG--FLN 161
Query: 195 GLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSG- 253
+L+ E +++ + +GEN+ L+R + + V +Y+H + S
Sbjct: 162 SSELSELPAGPEKEGCLKDQLALAIGKLGENMTLKRAAWVKVPAGFYVGSYVHGAMHSSS 221
Query: 254 -----LGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPL 292
LG+ L+ E + +S + L G L H+V PL
Sbjct: 222 LHNLELGKYGALVVCETSERKASLEDL---GRRLGQHVVGMAPL 262
>WB|WBGene00010094 [details] [associations]
symbol:tsfm-1 species:6239 "Caenorhabditis elegans"
[GO:0003746 "translation elongation factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 GO:GO:0003746
SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
GeneTree:ENSGT00390000016293 HOGENOM:HOG000220988 OMA:FANCKKA
EMBL:D87850 EMBL:Z78198 PIR:T22713 RefSeq:NP_506079.1
UniGene:Cel.19688 ProteinModelPortal:Q20819 SMR:Q20819
DIP:DIP-25617N MINT:MINT-1104171 STRING:Q20819 PaxDb:Q20819
EnsemblMetazoa:F55C5.5 GeneID:179683 KEGG:cel:CELE_F55C5.5
UCSC:F55C5.5 CTD:179683 WormBase:F55C5.5 InParanoid:Q20819
NextBio:906442 Uniprot:Q20819
Length = 316
Score = 172 (65.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 75/326 (23%), Positives = 151/326 (46%)
Query: 64 SRNFSDQAPAATEQVNLIKQLREQTSAPMKDVKLALVDC-DWDIEAALKELR----KRGK 118
SRN ++ +++ + LR++T + + AL+ + D+++A+K L+ K G
Sbjct: 15 SRNLAEAEKKVSKEA--LMALRKKTGYSYVNCRKALIQFGENDMDSAVKWLKEAAAKEGW 72
Query: 119 VLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENV 178
A+K +R + GL+++ + S AAV+EL+CETDFV+R+ F+ N+
Sbjct: 73 AKAAKLGTRVTSNGLVSVVTDNSTAAVVELSCETDFVARSGAFK----------DLLSNI 122
Query: 179 SQPVSGLFPVGPEYLE-GLKLNLDHPKIGGETTVQNA-ITEVAAI----MGENVKLRRGF 232
S V L P+ + G KL +G T + EV ++ +GEN+ +RR
Sbjct: 123 SNSV--LAKAKPQSISSGSKLQEFTYDLGDLTDSDGKNMREVLSLSIGKLGENMTVRR-- 178
Query: 233 LLSASSPGVVSTYLHTSPQSG-----LGRIAGLLSL-EVEDGSSSFDPLKRVGSELAMHI 286
+ + +P + + + P+ G +GR L++L + GS S L ++ HI
Sbjct: 179 VKAFKAPEGTTLFGASHPKDGTDDIPMGRFISLIALNQSSPGSISSQQL---AGQICQHI 235
Query: 287 VAQKPLFLTKELVSADALENEREILKSQAESTGKSPMAIEKMVEGRLRKYYEEVVLMEQK 346
+ P L + +A++++ + + + P+ + + E E L+ Q
Sbjct: 236 IGMSPESLGE---AAESVKTQEGLRSQEGHDPNADPVVVTNIDES-------ETALLRQA 285
Query: 347 FVMNDTLNIKTILDNLSKEVGSPVKI 372
F++N + ++ L + + + V++
Sbjct: 286 FMLNPSQSVHEYLKSHNANILDFVRV 311
>UNIPROTKB|C9JT21 [details] [associations]
symbol:TSFM "Elongation factor Ts" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005622 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HOGENOM:HOG000220988 HGNC:HGNC:12367 IPI:IPI00916739
ProteinModelPortal:C9JT21 SMR:C9JT21 STRING:C9JT21 PRIDE:C9JT21
Ensembl:ENST00000457189 ArrayExpress:C9JT21 Bgee:C9JT21
Uniprot:C9JT21
Length = 169
Score = 149 (57.5 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 49/172 (28%), Positives = 74/172 (43%)
Query: 83 QLREQTSAPMKDVKLALVDCDWDIEAAL----KELRKRGKVLASKKSSRTATEGLLALAQ 138
+LR +T + K AL C D++ A KE +K G A+K R EGL+ L Q
Sbjct: 2 KLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQ 61
Query: 139 NESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPVSGLFPVG---PEYLEG 195
+ ++E+NCETDFVSRN FQ + + G L G
Sbjct: 62 EGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKDQPSAYSKGFLNSSELSG 121
Query: 196 LKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLH 247
L D E ++++ + +GEN+ L+R + S V +Y+H
Sbjct: 122 LPAGPDR-----EGSLKDQLALAIGKLGENMILKRAAWVKVPSGFYVGSYVH 168
>UNIPROTKB|F8W6R3 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00889 PROSITE:PS01127 GO:GO:0005739 GO:GO:0005634
GO:GO:0003746 EMBL:AC025165 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 HGNC:HGNC:12367 IPI:IPI00910455
ProteinModelPortal:F8W6R3 SMR:F8W6R3 PRIDE:F8W6R3
Ensembl:ENST00000350762 UCSC:uc010sse.2 ArrayExpress:F8W6R3
Bgee:F8W6R3 Uniprot:F8W6R3
Length = 285
Score = 164 (62.8 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 61/214 (28%), Positives = 93/214 (43%)
Query: 91 PMKDVK-LALV-DCDWDIEAAL-KELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIE 147
P+++V L V C+ E L KE +K G A+K R EGL+ L Q + ++E
Sbjct: 21 PLQNVTGLNTVGSCNTVAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQEGNTTVLVE 80
Query: 148 LNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPVSGLFPVG---PEYLEGLKLNLDHPK 204
+NCETDFVSRN FQ + + G L GL D
Sbjct: 81 VNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKDQPSAYSKGFLNSSELSGLPAGPDR-- 138
Query: 205 IGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSG------LGRIA 258
E ++++ + +GEN+ L+R + S V +Y+H + QS LG+
Sbjct: 139 ---EGSLKDQLALAIGKLGENMILKRAAWVKVPSGFYVGSYVHGAMQSPSLHKLVLGKYG 195
Query: 259 GLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPL 292
L+ E + ++ L+ VG L H+V PL
Sbjct: 196 ALVICETSEQKTN---LEDVGRRLGQHVVGMAPL 226
>UNIPROTKB|P43896 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IEA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005739 GO:GO:0005634
GO:GO:0003746 SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713 EMBL:L37935
EMBL:BC149988 IPI:IPI00697490 PIR:I45941 RefSeq:NP_776629.1
UniGene:Bt.103027 PDB:1XB2 PDBsum:1XB2 ProteinModelPortal:P43896
SMR:P43896 IntAct:P43896 STRING:P43896 PRIDE:P43896
Ensembl:ENSBTAT00000022496 GeneID:281551 KEGG:bta:281551 CTD:10102
GeneTree:ENSGT00390000016293 HOGENOM:HOG000220988
HOVERGEN:HBG005571 InParanoid:P43896 OMA:FANCKKA OrthoDB:EOG48PMKQ
EvolutionaryTrace:P43896 NextBio:20805502 Uniprot:P43896
Length = 338
Score = 166 (63.5 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 59/224 (26%), Positives = 100/224 (44%)
Query: 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAAL----KELRKRGKVLASKKSSRTATEGLLA 135
L+ +LR +T + K AL C D++ A K+ +K G A++ R EGL+
Sbjct: 62 LLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEGLIG 121
Query: 136 LAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXX-ENVSQPVSGLFPVGPEYLE 194
L Q ++E+NCETDFVSRN FQ +N+ +S + G +L
Sbjct: 122 LLQEGDTTVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQNLKDQLS-TYSKG--FLN 178
Query: 195 GLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSG- 253
+L+ E ++++ + +GEN+ L+R + + V +Y+H + S
Sbjct: 179 SSELSELPAGPEREGSLKDQLALAIGKLGENMILKRAAWVKVPAGFYVGSYVHGAMHSPS 238
Query: 254 -----LGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPL 292
LG+ L+ E + ++ L +G L H+V PL
Sbjct: 239 LHNLVLGKYGALVICETSELKAN---LADLGRRLGQHVVGMAPL 279
>UNIPROTKB|F8VPA7 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HGNC:HGNC:12367 IPI:IPI01022674 ProteinModelPortal:F8VPA7
SMR:F8VPA7 Ensembl:ENST00000548851 ArrayExpress:F8VPA7 Bgee:F8VPA7
Uniprot:F8VPA7
Length = 200
Score = 146 (56.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 36/94 (38%), Positives = 50/94 (53%)
Query: 73 AATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAAL----KELRKRGKVLASKKSSRT 128
A+ L+ +LR +T + K AL C D++ A KE +K G A+K R
Sbjct: 42 ASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRK 101
Query: 129 ATEGLLALAQNESKAAVIELNCETDFVSRNEIFQ 162
EGL+ L Q + ++E+NCETDFVSRN FQ
Sbjct: 102 TKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQ 135
>UNIPROTKB|C9JG32 [details] [associations]
symbol:TSFM "Elongation factor Ts" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005622 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HGNC:HGNC:12367 IPI:IPI01022674 ProteinModelPortal:C9JG32
SMR:C9JG32 STRING:C9JG32 PRIDE:C9JG32 Ensembl:ENST00000434359
HOGENOM:HOG000152327 ArrayExpress:C9JG32 Bgee:C9JG32 Uniprot:C9JG32
Length = 140
Score = 138 (53.6 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 83 QLREQTSAPMKDVKLALVDCDWDIEAAL----KELRKRGKVLASKKSSRTATEGLLALAQ 138
+LR +T + K AL C D++ A KE +K G A+K R EGL+ L Q
Sbjct: 2 KLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQ 61
Query: 139 NESKAAVIELNCETDFVSRNEIFQ 162
+ ++E+NCETDFVSRN FQ
Sbjct: 62 EGNTTVLVEVNCETDFVSRNLKFQ 85
>UNIPROTKB|F8VS27 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HGNC:HGNC:12367 IPI:IPI01021816 ProteinModelPortal:F8VS27
SMR:F8VS27 Ensembl:ENST00000550559 ArrayExpress:F8VS27 Bgee:F8VS27
Uniprot:F8VS27
Length = 230
Score = 146 (56.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 36/94 (38%), Positives = 50/94 (53%)
Query: 73 AATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAAL----KELRKRGKVLASKKSSRT 128
A+ L+ +LR +T + K AL C D++ A KE +K G A+K R
Sbjct: 42 ASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRK 101
Query: 129 ATEGLLALAQNESKAAVIELNCETDFVSRNEIFQ 162
EGL+ L Q + ++E+NCETDFVSRN FQ
Sbjct: 102 TKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQ 135
>UNIPROTKB|I3LF68 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9823 "Sus scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IEA] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0005634 GO:GO:0003746 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
GeneTree:ENSGT00390000016293 Ensembl:ENSSSCT00000024924 OMA:AGPEHEG
Uniprot:I3LF68
Length = 162
Score = 126 (49.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 80 LIKQLREQTSAPMKDVK--LALVDCDWDIEAAL----KELRKRGKVLASKKSSRTATEGL 133
L+ +LR +T + K L L C D++ A K+ +K G A++ R EGL
Sbjct: 48 LLMKLRRKTGYSFVNCKKALXLETCCGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEGL 107
Query: 134 LALAQNESKAAVIELNCETDFVSRNEIFQ 162
+ L Q + + ++E+NCETDFVSRN FQ
Sbjct: 108 IGLLQEGNTSVLVEVNCETDFVSRNLKFQ 136
>FB|FBgn0032646 [details] [associations]
symbol:CG6412 species:7227 "Drosophila melanogaster"
[GO:0006414 "translational elongation" evidence=ISS] [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 GO:GO:0005739 EMBL:AE014134 GO:GO:0003746
SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 GeneTree:ENSGT00390000016293
OMA:FANCKKA EMBL:AY051938 RefSeq:NP_609847.1 UniGene:Dm.4434
HSSP:P02997 ProteinModelPortal:Q9VJC7 SMR:Q9VJC7 IntAct:Q9VJC7
MINT:MINT-318283 STRING:Q9VJC7 PaxDb:Q9VJC7 PRIDE:Q9VJC7
EnsemblMetazoa:FBtr0080994 GeneID:35060 KEGG:dme:Dmel_CG6412
UCSC:CG6412-RA FlyBase:FBgn0032646 InParanoid:Q9VJC7
OrthoDB:EOG4VT4D3 PhylomeDB:Q9VJC7 ChiTaRS:CG6412 GenomeRNAi:35060
NextBio:791621 Bgee:Q9VJC7 Uniprot:Q9VJC7
Length = 318
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 49/181 (27%), Positives = 87/181 (48%)
Query: 84 LREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVL----ASKKSSRTATEGLLALAQN 139
LR++T + K AL + D+ A K L ++ + L A+K + R GL+ +
Sbjct: 35 LRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAHGLIGVLIR 94
Query: 140 ESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPVSGLFPVGPEYLEGLKLN 199
++ A++ELNCETDFV+RN+ F+ +++ L+ +G + + L+ N
Sbjct: 95 GNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDLTDFDGDLWKLGFD-ADALR-N 152
Query: 200 LDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPGVVSTYLHTSPQSGLGRIAG 259
L + G T + + AI GEN +RR A++ + Y H +P + +G G
Sbjct: 153 LRTEE--GRTLGDHLALLIGAI-GENATIRRALCFKANNDLKLVGYAHPAP-TNVGTTEG 208
Query: 260 L 260
+
Sbjct: 209 I 209
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 386 374 0.00087 117 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 598 (64 KB)
Total size of DFA: 200 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.73u 0.10s 31.83t Elapsed: 00:00:01
Total cpu time: 31.73u 0.10s 31.83t Elapsed: 00:00:01
Start: Mon May 20 15:59:26 2013 End: Mon May 20 15:59:27 2013