Query 016591
Match_columns 386
No_of_seqs 260 out of 1670
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 16:08:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016591.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016591hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kiz_A E3 ubiquitin-protein li 99.3 1.1E-12 3.8E-17 99.7 6.1 55 24-78 10-64 (69)
2 2ect_A Ring finger protein 126 99.3 5.6E-13 1.9E-17 103.7 4.3 56 25-80 12-67 (78)
3 2ep4_A Ring finger protein 24; 99.3 1.3E-12 4.5E-17 100.6 5.5 55 24-78 11-65 (74)
4 1iym_A EL5; ring-H2 finger, ub 99.3 1.2E-12 4.1E-17 95.1 4.1 51 26-76 3-54 (55)
5 2djb_A Polycomb group ring fin 99.3 1.4E-12 4.9E-17 100.3 4.7 53 26-80 13-65 (72)
6 2l0b_A E3 ubiquitin-protein li 99.3 1.3E-12 4.4E-17 105.4 4.3 52 26-77 38-89 (91)
7 1x4j_A Ring finger protein 38; 99.3 9.8E-13 3.3E-17 101.9 3.2 53 25-77 20-72 (75)
8 1t1h_A Gspef-atpub14, armadill 99.3 2.3E-12 7.8E-17 100.2 5.1 59 25-86 5-64 (78)
9 3ng2_A RNF4, snurf, ring finge 99.3 1.7E-12 5.8E-17 98.8 3.7 58 24-81 6-67 (71)
10 3lrq_A E3 ubiquitin-protein li 99.3 1.1E-12 3.6E-17 107.7 2.1 59 26-86 20-79 (100)
11 2y43_A E3 ubiquitin-protein li 99.2 2.6E-12 8.7E-17 104.6 3.3 60 26-87 20-79 (99)
12 2ecm_A Ring finger and CHY zin 99.2 5.7E-12 1.9E-16 91.4 4.4 50 27-76 4-54 (55)
13 1v87_A Deltex protein 2; ring- 99.2 7.2E-12 2.5E-16 104.1 5.2 55 24-78 21-95 (114)
14 2ea6_A Ring finger protein 4; 99.2 4.2E-12 1.5E-16 95.7 3.4 53 25-77 12-68 (69)
15 2ecl_A Ring-box protein 2; RNF 99.2 8.5E-12 2.9E-16 98.8 5.1 54 25-78 12-77 (81)
16 2csy_A Zinc finger protein 183 99.2 1.3E-11 4.3E-16 97.0 5.6 50 24-76 11-60 (81)
17 2ysl_A Tripartite motif-contai 99.2 1.5E-11 5.1E-16 94.1 5.5 51 26-79 18-71 (73)
18 1chc_A Equine herpes virus-1 r 99.2 7.8E-12 2.7E-16 94.6 3.9 48 27-76 4-51 (68)
19 2d8t_A Dactylidin, ring finger 99.2 7.9E-12 2.7E-16 95.9 3.7 50 25-77 12-61 (71)
20 2ckl_A Polycomb group ring fin 99.2 1E-11 3.6E-16 102.6 4.6 51 26-78 13-63 (108)
21 2ct2_A Tripartite motif protei 99.2 1.5E-11 5E-16 97.1 5.2 55 25-79 12-70 (88)
22 3fl2_A E3 ubiquitin-protein li 99.2 1.6E-11 5.5E-16 103.9 5.3 62 26-90 50-113 (124)
23 4ayc_A E3 ubiquitin-protein li 99.2 7.2E-12 2.5E-16 108.3 3.2 49 27-78 52-100 (138)
24 3ztg_A E3 ubiquitin-protein li 99.2 2.3E-11 8E-16 97.3 5.6 58 26-86 11-72 (92)
25 2xeu_A Ring finger protein 4; 99.2 1E-11 3.5E-16 92.3 3.2 54 27-80 2-59 (64)
26 3dpl_R Ring-box protein 1; ubi 99.2 1.7E-11 5.8E-16 102.6 4.6 52 26-77 35-101 (106)
27 2ecy_A TNF receptor-associated 99.1 2.6E-11 8.9E-16 91.5 4.7 51 26-79 13-64 (66)
28 2ecw_A Tripartite motif-contai 99.1 2.6E-11 8.8E-16 94.6 4.7 52 26-80 17-74 (85)
29 2yur_A Retinoblastoma-binding 99.1 2.7E-11 9.2E-16 93.8 4.6 51 26-79 13-66 (74)
30 2ecn_A Ring finger protein 141 99.1 1E-11 3.4E-16 94.6 1.7 52 24-79 11-62 (70)
31 1wgm_A Ubiquitin conjugation f 99.1 3.9E-11 1.3E-15 98.8 5.2 61 26-89 20-81 (98)
32 2kr4_A Ubiquitin conjugation f 99.1 3.6E-11 1.2E-15 96.3 4.7 59 26-87 12-70 (85)
33 2ecv_A Tripartite motif-contai 99.1 3.5E-11 1.2E-15 93.8 4.3 52 26-80 17-74 (85)
34 2kre_A Ubiquitin conjugation f 99.1 5.1E-11 1.8E-15 98.4 5.4 61 26-89 27-87 (100)
35 1z6u_A NP95-like ring finger p 99.1 7.7E-11 2.6E-15 103.9 6.4 61 27-90 77-139 (150)
36 2egp_A Tripartite motif-contai 99.1 1.3E-11 4.4E-16 95.7 1.1 51 26-79 10-67 (79)
37 2ckl_B Ubiquitin ligase protei 99.1 3E-11 1E-15 107.0 2.9 61 27-89 53-115 (165)
38 2ysj_A Tripartite motif-contai 99.1 1.3E-10 4.4E-15 86.8 4.8 43 26-71 18-63 (63)
39 1jm7_B BARD1, BRCA1-associated 99.1 8.6E-11 2.9E-15 98.7 4.2 57 26-86 20-76 (117)
40 1g25_A CDK-activating kinase a 99.0 1E-10 3.5E-15 88.0 3.7 54 27-80 2-58 (65)
41 1jm7_A BRCA1, breast cancer ty 99.0 5.1E-11 1.7E-15 98.2 2.1 51 27-80 20-73 (112)
42 4a0k_B E3 ubiquitin-protein li 99.0 2.7E-11 9.2E-16 103.3 0.4 53 26-78 46-113 (117)
43 3hct_A TNF receptor-associated 99.0 1.2E-10 4.2E-15 97.8 3.3 64 26-92 16-80 (118)
44 3l11_A E3 ubiquitin-protein li 99.0 5.7E-11 1.9E-15 99.1 1.1 49 25-76 12-61 (115)
45 4ap4_A E3 ubiquitin ligase RNF 99.0 1.8E-10 6.3E-15 96.7 3.3 54 26-79 5-62 (133)
46 2d8s_A Cellular modulator of i 99.0 2.7E-10 9.3E-15 90.7 3.9 55 23-78 10-71 (80)
47 2ecj_A Tripartite motif-contai 99.0 3.1E-10 1.1E-14 82.8 3.9 43 26-71 13-58 (58)
48 2yu4_A E3 SUMO-protein ligase 99.0 5E-10 1.7E-14 91.0 5.2 63 26-90 5-76 (94)
49 1e4u_A Transcriptional repress 98.9 7.7E-10 2.6E-14 87.5 5.2 54 25-79 8-64 (78)
50 2c2l_A CHIP, carboxy terminus 98.9 5.1E-10 1.8E-14 105.0 4.9 63 25-90 205-268 (281)
51 1rmd_A RAG1; V(D)J recombinati 98.9 3.5E-10 1.2E-14 94.4 1.7 52 26-80 21-73 (116)
52 2ct0_A Non-SMC element 1 homol 98.8 3.5E-09 1.2E-13 83.4 5.5 51 27-79 14-66 (74)
53 4ap4_A E3 ubiquitin ligase RNF 98.8 8.9E-10 3E-14 92.4 2.0 56 24-79 68-127 (133)
54 2vje_A E3 ubiquitin-protein li 98.8 2.7E-09 9.3E-14 80.9 4.1 49 25-76 5-56 (64)
55 3knv_A TNF receptor-associated 98.8 1.2E-09 4.1E-14 95.3 2.3 50 26-78 29-79 (141)
56 2f42_A STIP1 homology and U-bo 98.8 3E-09 1E-13 96.8 4.7 61 26-89 104-165 (179)
57 1bor_A Transcription factor PM 98.8 1.2E-09 4E-14 80.5 1.5 48 25-78 3-50 (56)
58 3hcs_A TNF receptor-associated 98.8 2.9E-09 1E-13 94.5 3.3 62 26-90 16-78 (170)
59 4ic3_A E3 ubiquitin-protein li 98.7 2.6E-09 8.9E-14 83.0 1.4 45 26-77 22-67 (74)
60 2y1n_A E3 ubiquitin-protein li 98.7 7.1E-09 2.4E-13 104.4 5.0 48 28-78 332-380 (389)
61 3htk_C E3 SUMO-protein ligase 98.7 3.3E-09 1.1E-13 101.7 2.4 60 26-87 179-242 (267)
62 2vje_B MDM4 protein; proto-onc 98.7 9.7E-09 3.3E-13 77.6 3.9 48 26-76 5-55 (63)
63 2ecg_A Baculoviral IAP repeat- 98.6 1.7E-08 5.8E-13 78.3 2.0 45 26-77 23-68 (75)
64 2ea5_A Cell growth regulator w 98.5 1E-07 3.5E-12 73.2 4.1 47 24-77 11-58 (68)
65 1wim_A KIAA0161 protein; ring 98.5 2.3E-08 8E-13 80.6 0.3 48 27-74 4-61 (94)
66 2bay_A PRE-mRNA splicing facto 98.4 7.5E-08 2.5E-12 72.7 2.3 51 28-80 3-53 (61)
67 2yho_A E3 ubiquitin-protein li 98.4 5.5E-08 1.9E-12 76.7 1.3 44 27-77 17-61 (79)
68 1vyx_A ORF K3, K3RING; zinc-bi 98.3 3.4E-07 1.2E-11 68.9 4.2 51 24-77 2-59 (60)
69 3k1l_B Fancl; UBC, ring, RWD, 98.3 1.6E-07 5.6E-12 93.2 1.7 53 24-76 304-372 (381)
70 3t6p_A Baculoviral IAP repeat- 98.2 1.7E-07 5.8E-12 93.1 0.9 45 26-77 293-338 (345)
71 3vk6_A E3 ubiquitin-protein li 97.9 4.4E-06 1.5E-10 69.1 3.4 45 30-76 3-48 (101)
72 3nw0_A Non-structural maintena 97.5 5.6E-05 1.9E-09 71.3 4.8 51 28-80 180-232 (238)
73 2ko5_A Ring finger protein Z; 95.6 0.0057 2E-07 50.0 2.5 47 28-78 28-74 (99)
74 2jun_A Midline-1; B-BOX, TRIM, 94.9 0.017 5.9E-07 46.3 3.4 35 27-62 2-37 (101)
75 2lri_C Autoimmune regulator; Z 91.7 0.15 5.2E-06 38.7 3.8 52 21-75 5-60 (66)
76 3m62_A Ubiquitin conjugation f 90.5 0.2 6.9E-06 55.6 4.8 59 27-88 890-949 (968)
77 2l5u_A Chromodomain-helicase-D 86.7 0.32 1.1E-05 36.1 2.2 50 21-73 4-57 (61)
78 3i2d_A E3 SUMO-protein ligase 85.2 0.47 1.6E-05 47.4 3.2 61 28-90 249-313 (371)
79 2cs3_A Protein C14ORF4, MY039 84.8 0.96 3.3E-05 36.0 4.2 39 26-64 13-52 (93)
80 4fo9_A E3 SUMO-protein ligase 83.0 0.77 2.6E-05 45.7 3.6 61 28-90 215-279 (360)
81 1weo_A Cellulose synthase, cat 81.9 2.4 8.3E-05 34.2 5.5 53 24-76 12-69 (93)
82 1wil_A KIAA1045 protein; ring 80.1 1.9 6.5E-05 34.5 4.3 35 26-61 13-47 (89)
83 3o36_A Transcription intermedi 78.6 0.48 1.6E-05 42.1 0.4 46 27-75 3-52 (184)
84 2k16_A Transcription initiatio 77.9 0.57 2E-05 35.7 0.6 51 26-76 16-70 (75)
85 2ysm_A Myeloid/lymphoid or mix 77.6 0.71 2.4E-05 37.8 1.1 49 24-72 3-55 (111)
86 3u5n_A E3 ubiquitin-protein li 76.4 0.38 1.3E-05 43.7 -0.9 49 24-75 3-55 (207)
87 1fp0_A KAP-1 corepressor; PHD 76.0 1.1 3.9E-05 35.9 1.9 51 22-75 19-73 (88)
88 1mm2_A MI2-beta; PHD, zinc fin 75.2 0.61 2.1E-05 34.5 0.1 48 24-74 5-56 (61)
89 1xwh_A Autoimmune regulator; P 71.9 0.64 2.2E-05 34.8 -0.5 48 23-73 3-54 (66)
90 2lbm_A Transcriptional regulat 71.1 3.5 0.00012 35.8 4.0 47 24-73 59-116 (142)
91 2d8v_A Zinc finger FYVE domain 68.7 2.8 9.5E-05 32.0 2.4 34 24-61 4-38 (67)
92 1f62_A Transcription factor WS 67.9 2.8 9.5E-05 29.4 2.2 44 30-73 2-49 (51)
93 2yql_A PHD finger protein 21A; 67.5 0.52 1.8E-05 34.2 -1.8 45 25-72 6-54 (56)
94 2lv9_A Histone-lysine N-methyl 64.6 1.9 6.3E-05 34.9 0.8 45 28-73 28-75 (98)
95 1we9_A PHD finger family prote 63.0 0.94 3.2E-05 33.4 -1.2 49 25-73 3-57 (64)
96 1wem_A Death associated transc 62.9 1.4 4.7E-05 33.7 -0.3 54 21-75 9-71 (76)
97 1weu_A Inhibitor of growth fam 57.9 5.4 0.00018 32.0 2.4 51 23-75 31-86 (91)
98 2e6r_A Jumonji/ARID domain-con 57.2 0.85 2.9E-05 36.6 -2.5 50 24-73 12-65 (92)
99 2l43_A N-teminal domain from h 57.1 1.8 6.2E-05 34.4 -0.5 54 25-78 22-79 (88)
100 2ro1_A Transcription intermedi 56.5 2.2 7.5E-05 38.3 -0.2 44 28-74 2-49 (189)
101 1z60_A TFIIH basal transcripti 56.3 3.7 0.00012 30.6 1.1 43 29-71 16-58 (59)
102 3ql9_A Transcriptional regulat 55.4 9.1 0.00031 32.6 3.6 46 25-73 54-110 (129)
103 3v43_A Histone acetyltransfera 54.1 16 0.00054 29.8 4.7 45 28-72 5-62 (112)
104 1wew_A DNA-binding family prot 53.6 2.5 8.5E-05 32.6 -0.3 53 22-75 10-73 (78)
105 1wen_A Inhibitor of growth fam 51.4 7.5 0.00026 29.6 2.2 51 23-75 11-66 (71)
106 2ri7_A Nucleosome-remodeling f 50.9 2.3 7.7E-05 37.2 -1.0 50 23-73 3-58 (174)
107 1wep_A PHF8; structural genomi 50.9 10 0.00035 29.0 2.9 50 25-75 9-64 (79)
108 2yt5_A Metal-response element- 49.8 4.7 0.00016 29.7 0.7 51 25-75 3-62 (66)
109 3lqh_A Histone-lysine N-methyl 49.3 3.7 0.00013 36.9 0.2 48 29-76 3-65 (183)
110 1joc_A EEA1, early endosomal a 48.8 8.6 0.00029 32.3 2.3 37 23-59 64-101 (125)
111 1z2q_A LM5-1; membrane protein 48.4 9.7 0.00033 29.6 2.4 38 23-60 16-54 (84)
112 3t7l_A Zinc finger FYVE domain 47.5 9.7 0.00033 30.1 2.3 39 23-61 15-54 (90)
113 1x4u_A Zinc finger, FYVE domai 46.6 10 0.00035 29.4 2.3 35 24-58 10-45 (84)
114 2puy_A PHD finger protein 21A; 45.9 8.3 0.00028 28.0 1.6 46 25-73 2-51 (60)
115 2yw8_A RUN and FYVE domain-con 45.5 11 0.00036 29.2 2.2 37 24-60 15-52 (82)
116 3mpx_A FYVE, rhogef and PH dom 45.5 4.4 0.00015 39.9 0.0 52 24-75 371-430 (434)
117 1zbd_B Rabphilin-3A; G protein 45.4 7.1 0.00024 33.4 1.3 33 26-58 53-87 (134)
118 1wev_A Riken cDNA 1110020M19; 43.6 1.3 4.4E-05 35.2 -3.4 50 26-75 14-73 (88)
119 2zet_C Melanophilin; complex, 41.5 11 0.00038 32.9 1.9 32 27-58 67-100 (153)
120 2pv0_B DNA (cytosine-5)-methyl 38.3 19 0.00067 36.0 3.4 46 25-73 90-147 (386)
121 1wd2_A Ariadne-1 protein homol 37.6 3.2 0.00011 30.7 -1.8 35 29-63 7-46 (60)
122 3ask_A E3 ubiquitin-protein li 37.6 6.8 0.00023 36.5 -0.0 45 29-73 175-224 (226)
123 2ku3_A Bromodomain-containing 37.6 22 0.00076 26.9 2.9 50 24-73 12-65 (71)
124 3o70_A PHD finger protein 13; 36.9 4.6 0.00016 30.5 -1.1 49 24-73 15-66 (68)
125 2e6s_A E3 ubiquitin-protein li 36.4 7 0.00024 30.2 -0.1 45 29-73 27-76 (77)
126 3asl_A E3 ubiquitin-protein li 36.2 4.5 0.00015 30.7 -1.3 43 31-73 21-68 (70)
127 3v43_A Histone acetyltransfera 35.9 9.6 0.00033 31.1 0.6 44 30-73 63-111 (112)
128 1dvp_A HRS, hepatocyte growth 35.2 14 0.00046 33.6 1.6 33 28-60 161-194 (220)
129 3lt7_A Adhesin YADA; adhesion, 34.5 12 0.00041 28.3 0.9 16 313-328 45-60 (64)
130 3a1b_A DNA (cytosine-5)-methyl 34.2 19 0.00067 31.7 2.3 37 24-63 75-113 (159)
131 3zyq_A Hepatocyte growth facto 33.8 16 0.00054 33.5 1.8 33 28-60 164-197 (226)
132 2ct7_A Ring finger protein 31; 33.8 5.3 0.00018 31.2 -1.3 32 31-62 28-62 (86)
133 1y02_A CARP2, FYVE-ring finger 33.7 3.4 0.00012 34.8 -2.5 52 24-75 15-67 (120)
134 2vpb_A Hpygo1, pygopus homolog 33.2 31 0.001 25.7 3.0 34 26-59 6-41 (65)
135 4gne_A Histone-lysine N-methyl 31.8 17 0.0006 29.8 1.5 50 23-77 10-65 (107)
136 2kwj_A Zinc finger protein DPF 31.4 21 0.00072 29.1 2.0 33 29-61 2-41 (114)
137 3shb_A E3 ubiquitin-protein li 30.6 5.9 0.0002 30.7 -1.4 26 48-73 46-76 (77)
138 1wfk_A Zinc finger, FYVE domai 30.4 23 0.00079 27.8 2.0 34 27-60 8-42 (88)
139 1vfy_A Phosphatidylinositol-3- 30.2 26 0.0009 26.3 2.2 32 28-59 11-43 (73)
140 2gmg_A Hypothetical protein PF 29.1 15 0.00052 30.3 0.7 30 43-77 67-96 (105)
141 1m3v_A FLIN4, fusion of the LI 27.0 35 0.0012 27.7 2.6 50 29-78 33-82 (122)
142 2o35_A Hypothetical protein DU 26.4 24 0.00083 29.0 1.4 12 52-63 42-53 (105)
143 3fyb_A Protein of unknown func 26.0 25 0.00085 28.8 1.4 12 52-63 41-52 (104)
144 2kgg_A Histone demethylase jar 25.9 21 0.00071 25.1 0.9 43 30-72 4-52 (52)
145 2jmo_A Parkin; IBR, E3 ligase, 24.7 5.8 0.0002 30.7 -2.5 16 48-63 55-70 (80)
146 2cu8_A Cysteine-rich protein 2 24.4 44 0.0015 24.4 2.5 41 28-78 9-49 (76)
147 2fiy_A Protein FDHE homolog; F 24.0 6.6 0.00022 38.1 -2.8 48 26-74 180-231 (309)
148 2xjy_A Rhombotin-2; oncoprotei 23.7 50 0.0017 26.7 3.0 50 28-77 29-78 (131)
149 3c6w_A P28ING5, inhibitor of g 23.6 9.2 0.00031 28.0 -1.5 47 25-73 6-57 (59)
150 2vnf_A ING 4, P29ING4, inhibit 23.5 8.8 0.0003 28.1 -1.6 46 24-73 6-58 (60)
151 1wee_A PHD finger family prote 23.2 6.8 0.00023 29.5 -2.3 49 25-74 13-66 (72)
152 2rsd_A E3 SUMO-protein ligase 23.1 5.6 0.00019 29.7 -2.8 47 26-73 8-64 (68)
153 2ve8_A FTSK, DNA translocase F 22.8 52 0.0018 25.3 2.7 28 312-339 28-55 (73)
154 1x64_A Alpha-actinin-2 associa 22.5 72 0.0025 24.1 3.5 42 26-78 23-64 (89)
155 2p22_A Suppressor protein STP2 21.8 56 0.0019 29.2 3.0 54 274-334 17-70 (174)
156 2xqn_T Testin, TESS; metal-bin 21.5 82 0.0028 25.2 3.8 45 29-77 31-75 (126)
157 2l4z_A DNA endonuclease RBBP8, 21.4 37 0.0013 27.9 1.7 39 28-76 61-99 (123)
158 1p6r_A Penicillinase repressor 21.1 37 0.0013 25.1 1.5 33 304-336 23-55 (82)
159 1wyh_A SLIM 2, skeletal muscle 20.5 84 0.0029 22.4 3.4 42 28-78 5-46 (72)
160 2a20_A Regulating synaptic mem 20.4 47 0.0016 24.8 1.8 36 26-61 7-43 (62)
161 2xb1_A Pygopus homolog 2, B-ce 20.4 44 0.0015 27.0 1.9 48 28-75 3-62 (105)
162 1x62_A C-terminal LIM domain p 20.2 44 0.0015 24.7 1.8 38 28-76 15-52 (79)
163 3vth_A Hydrogenase maturation 20.1 37 0.0013 36.8 1.7 48 28-75 111-193 (761)
No 1
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.34 E-value=1.1e-12 Score=99.72 Aligned_cols=55 Identities=27% Similarity=0.750 Sum_probs=47.8
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
....+..|+||++.|.....+..++|+|.||..||..|+.....||+||..|...
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQ 64 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSC
T ss_pred cCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCc
Confidence 3455788999999996666788889999999999999999888999999998754
No 2
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.34 E-value=5.6e-13 Score=103.73 Aligned_cols=56 Identities=25% Similarity=0.737 Sum_probs=48.1
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCCC
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDP 80 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~ 80 (386)
...+..|+||++.|.....+..++|+|.||..||..|++....||+||+.+...+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 67 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNT 67 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCS
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCccc
Confidence 34578899999999665667778999999999999999988999999999986543
No 3
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=1.3e-12 Score=100.63 Aligned_cols=55 Identities=33% Similarity=0.867 Sum_probs=47.2
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
....+..|+||++.|.....+.+++|+|.||..||..|++....||+||+.+...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQL 65 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSC
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccccc
Confidence 3455788999999996666677779999999999999999888999999988643
No 4
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.30 E-value=1.2e-12 Score=95.14 Aligned_cols=51 Identities=25% Similarity=0.789 Sum_probs=44.2
Q ss_pred cCCCccccccccccCCCCceecc-CCccccHHHHHHHHhcCCCCCCccccCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTS-CKHEFHLQCILEWCQRSSQCPMCWQPIS 76 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~-CgH~FC~~CI~~Wlq~s~~CPlCR~~i~ 76 (386)
+++..|+||++.|..++.+..++ |+|.||..||..|++.+..||+||+.+.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 34778999999997666666666 9999999999999999999999998874
No 5
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=1.4e-12 Score=100.33 Aligned_cols=53 Identities=32% Similarity=0.604 Sum_probs=46.1
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDP 80 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~ 80 (386)
.+++.|+||++.| .+++.+++|+|.||..||..|+.....||+||+.+...++
T Consensus 13 ~~~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 65 (72)
T 2djb_A 13 TPYILCSICKGYL--IDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQP 65 (72)
T ss_dssp CGGGSCTTTSSCC--SSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCS
T ss_pred CCCCCCCCCChHH--HCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCcccc
Confidence 4578899999999 5566666999999999999999988999999999986654
No 6
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.29 E-value=1.3e-12 Score=105.45 Aligned_cols=52 Identities=31% Similarity=0.751 Sum_probs=46.0
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
..+..|+||++.|..++.+..++|+|.||..||..|+..+..||+||..|..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 4577899999999666667778999999999999999999999999998864
No 7
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=9.8e-13 Score=101.89 Aligned_cols=53 Identities=26% Similarity=0.760 Sum_probs=46.3
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCC
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
..++..|+||++.|...+.+..++|+|.||..||..|++.+..||+||+.+..
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 34678899999999666667788999999999999999988999999998864
No 8
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.28 E-value=2.3e-12 Score=100.24 Aligned_cols=59 Identities=22% Similarity=0.357 Sum_probs=48.4
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc-CCCCCCccccCCCCCCChHHHH
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-SSQCPMCWQPISLKDPTSQELL 86 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-s~~CPlCR~~i~~kd~~~~~ll 86 (386)
..+++.|+||++.| .++ ++++|||.||..||..|+.. ...||+||+.+...++..+..+
T Consensus 5 ~~~~~~C~IC~~~~--~~P-v~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n~~l 64 (78)
T 1t1h_A 5 FPEYFRCPISLELM--KDP-VIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 64 (78)
T ss_dssp CSSSSSCTTTSCCC--SSE-EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTT
T ss_pred CcccCCCCCccccc--cCC-EEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccCHHH
Confidence 35688999999999 445 45599999999999999986 7889999999987766555444
No 9
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.27 E-value=1.7e-12 Score=98.76 Aligned_cols=58 Identities=28% Similarity=0.604 Sum_probs=47.9
Q ss_pred CccCCCccccccccccC----CCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCCCC
Q 016591 24 QDACDDACSICLEDFSE----SDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPT 81 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~----~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~~ 81 (386)
..+++..|+||++.|.. ...+.+++|+|.||..||..|+.....||+||+.+...+..
T Consensus 6 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 67 (71)
T 3ng2_A 6 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYH 67 (71)
T ss_dssp CCTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCSCC
T ss_pred CCCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhhee
Confidence 45668899999999833 13347789999999999999999889999999999866543
No 10
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.26 E-value=1.1e-12 Score=107.72 Aligned_cols=59 Identities=27% Similarity=0.614 Sum_probs=48.3
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcC-CCCCCccccCCCCCCChHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS-SQCPMCWQPISLKDPTSQELL 86 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s-~~CPlCR~~i~~kd~~~~~ll 86 (386)
.+++.|+||++.| .+++.+++|+|.||..||..|+... ..||+||..+...++.....+
T Consensus 20 ~~~~~C~IC~~~~--~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~~~~~ 79 (100)
T 3lrq_A 20 AEVFRCFICMEKL--RDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWA 79 (100)
T ss_dssp HHHTBCTTTCSBC--SSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECTTH
T ss_pred CCCCCCccCCccc--cCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHhhHHH
Confidence 3478899999999 4555548999999999999999877 699999999987665554444
No 11
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.24 E-value=2.6e-12 Score=104.61 Aligned_cols=60 Identities=25% Similarity=0.580 Sum_probs=49.6
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCCCChHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLE 87 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~~~~~ll~ 87 (386)
.+++.|+||++.| .+++.+++|||.||..||..|+.....||+||..+...++..+..+.
T Consensus 20 ~~~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~ 79 (99)
T 2y43_A 20 DDLLRCGICFEYF--NIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILD 79 (99)
T ss_dssp HHHTBCTTTCSBC--SSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEECHHHH
T ss_pred CCCCCcccCChhh--CCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhCCcCHHHH
Confidence 3478899999999 45555559999999999999999889999999999876666655553
No 12
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.23 E-value=5.7e-12 Score=91.36 Aligned_cols=50 Identities=34% Similarity=0.711 Sum_probs=43.1
Q ss_pred CCCccccccccccCC-CCceeccCCccccHHHHHHHHhcCCCCCCccccCC
Q 016591 27 CDDACSICLEDFSES-DPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPIS 76 (386)
Q Consensus 27 ed~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~ 76 (386)
.+..|+||++.|... ..+.+++|+|.||..||..|+.....||+||+.+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 467899999998432 35778899999999999999998899999998874
No 13
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.22 E-value=7.2e-12 Score=104.13 Aligned_cols=55 Identities=36% Similarity=0.719 Sum_probs=43.0
Q ss_pred CccCCCccccccccccCCC---------------CceeccCCccccHHHHHHHH-----hcCCCCCCccccCCCC
Q 016591 24 QDACDDACSICLEDFSESD---------------PSTLTSCKHEFHLQCILEWC-----QRSSQCPMCWQPISLK 78 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~---------------pv~ll~CgH~FC~~CI~~Wl-----q~s~~CPlCR~~i~~k 78 (386)
....+..|+||++.|.... .+.+++|+|.||..||..|+ ..+..||+||..|..+
T Consensus 21 ~~~~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 21 KVAPEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SSCCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred cCCCCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 3445678999999984321 23377999999999999999 4567899999988754
No 14
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=4.2e-12 Score=95.69 Aligned_cols=53 Identities=28% Similarity=0.641 Sum_probs=44.0
Q ss_pred ccCCCccccccccccCC----CCceeccCCccccHHHHHHHHhcCCCCCCccccCCC
Q 016591 25 DACDDACSICLEDFSES----DPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~----~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
...+..|+||++.|... ..+.+++|+|.||..||..|+.....||+||+.|..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCc
Confidence 34578899999998431 234778999999999999999988999999998864
No 15
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=8.5e-12 Score=98.77 Aligned_cols=54 Identities=30% Similarity=0.738 Sum_probs=42.8
Q ss_pred ccCCCccccccccccC-----------CC-CceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 25 DACDDACSICLEDFSE-----------SD-PSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 25 d~ed~~C~ICle~f~~-----------~~-pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
+.+++.|+||++.|.. ++ .+.+++|+|.||..||..|+..+.+||+||+.+...
T Consensus 12 ~~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 12 DVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQ 77 (81)
T ss_dssp SCCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEE
T ss_pred cCCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchh
Confidence 3457789999998832 22 335546999999999999999999999999988643
No 16
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=1.3e-11 Score=96.96 Aligned_cols=50 Identities=30% Similarity=0.693 Sum_probs=43.1
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCC
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPIS 76 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~ 76 (386)
....++.|+||++.| .+ +++++|+|.||..||..|+.....||+||+.+.
T Consensus 11 ~~~~~~~C~IC~~~~--~~-p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 11 EEEIPFRCFICRQAF--QN-PVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCCCSBCSSSCSBC--CS-EEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred cCCCCCCCcCCCchh--cC-eeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 334578899999999 44 456799999999999999998899999999986
No 17
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=1.5e-11 Score=94.13 Aligned_cols=51 Identities=25% Similarity=0.632 Sum_probs=42.7
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHh---cCCCCCCccccCCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ---RSSQCPMCWQPISLKD 79 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq---~s~~CPlCR~~i~~kd 79 (386)
.+++.|+||++.| .+ +..++|+|.||..||..|+. ....||+||+.+...+
T Consensus 18 ~~~~~C~IC~~~~--~~-~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 71 (73)
T 2ysl_A 18 QEEVICPICLDIL--QK-PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNA 71 (73)
T ss_dssp CCCCBCTTTCSBC--SS-EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCC
T ss_pred ccCCEeccCCccc--CC-eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCccc
Confidence 4578999999998 34 45559999999999999996 4568999999987654
No 18
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.20 E-value=7.8e-12 Score=94.57 Aligned_cols=48 Identities=38% Similarity=0.898 Sum_probs=43.1
Q ss_pred CCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCC
Q 016591 27 CDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPIS 76 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~ 76 (386)
.+..|+||++.+ .+++..++|+|.||..||..|+.....||+||..+.
T Consensus 4 ~~~~C~IC~~~~--~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 4 VAERCPICLEDP--SNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCCSSCCSCC--CSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCCeeCCccc--cCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 467899999998 566688899999999999999998899999999886
No 19
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=7.9e-12 Score=95.87 Aligned_cols=50 Identities=26% Similarity=0.544 Sum_probs=42.7
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCC
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
..++..|+||++.| .+ ++.++|+|.||..||..|+.....||+||+.+..
T Consensus 12 ~~~~~~C~IC~~~~--~~-~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 12 SLTVPECAICLQTC--VH-PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SSSCCBCSSSSSBC--SS-EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCCCccCCccc--CC-CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCH
Confidence 34578899999998 34 4556999999999999999988999999998863
No 20
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.19 E-value=1e-11 Score=102.63 Aligned_cols=51 Identities=27% Similarity=0.617 Sum_probs=44.7
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
.+++.|+||++.| .+++.+++|||.||..||..|+.....||+||..+...
T Consensus 13 ~~~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 13 NPHLMCVLCGGYF--IDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGGTBCTTTSSBC--SSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CCcCCCccCChHH--hCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 4578899999999 55666669999999999999999889999999998765
No 21
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=1.5e-11 Score=97.13 Aligned_cols=55 Identities=27% Similarity=0.567 Sum_probs=44.9
Q ss_pred ccCCCccccccccccCCCC-ceeccCCccccHHHHHHHHhcC---CCCCCccccCCCCC
Q 016591 25 DACDDACSICLEDFSESDP-STLTSCKHEFHLQCILEWCQRS---SQCPMCWQPISLKD 79 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~p-v~ll~CgH~FC~~CI~~Wlq~s---~~CPlCR~~i~~kd 79 (386)
..++..|+||++.|...+. +.+++|+|.||..||..|+... ..||+||+.+...+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 70 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITS 70 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSS
T ss_pred ccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchh
Confidence 3457889999999954332 6777999999999999999865 78999999887543
No 22
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.18 E-value=1.6e-11 Score=103.88 Aligned_cols=62 Identities=19% Similarity=0.307 Sum_probs=48.7
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhc-CCCCCCccccCCC-CCCChHHHHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-SSQCPMCWQPISL-KDPTSQELLEAVE 90 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-s~~CPlCR~~i~~-kd~~~~~ll~ave 90 (386)
.+++.|+||++.| .+ ++.++|||.||..||..|+.. ...||+||..+.. ..+..+..+..+.
T Consensus 50 ~~~~~C~IC~~~~--~~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i 113 (124)
T 3fl2_A 50 EETFQCICCQELV--FR-PITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVL 113 (124)
T ss_dssp HHHTBCTTTSSBC--SS-EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCCCHHHHHHH
T ss_pred ccCCCCCcCChHH--cC-cEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCCCCCCCCCHHHHHHH
Confidence 3468899999999 44 455699999999999999985 4589999999987 5666666554443
No 23
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.18 E-value=7.2e-12 Score=108.31 Aligned_cols=49 Identities=37% Similarity=0.817 Sum_probs=42.7
Q ss_pred CCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 27 CDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
+++.|+||++.| .+ +++++|||.||..||..|+..+..||+||+.+...
T Consensus 52 ~~~~C~iC~~~~--~~-~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 52 NELQCIICSEYF--IE-AVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSK 100 (138)
T ss_dssp HHSBCTTTCSBC--SS-EEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCCE
T ss_pred ccCCCcccCccc--CC-ceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCCC
Confidence 467899999999 34 45669999999999999999999999999998654
No 24
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.17 E-value=2.3e-11 Score=97.34 Aligned_cols=58 Identities=22% Similarity=0.442 Sum_probs=45.6
Q ss_pred cCCCccccccccccCCCCceecc-CCccccHHHHHHHHhc--CCCCCCccccC-CCCCCChHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTS-CKHEFHLQCILEWCQR--SSQCPMCWQPI-SLKDPTSQELL 86 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~-CgH~FC~~CI~~Wlq~--s~~CPlCR~~i-~~kd~~~~~ll 86 (386)
.+++.|+||++.| .+++. ++ |||.||..||..|+.. ...||+||+.+ ....+..+..+
T Consensus 11 ~~~~~C~IC~~~~--~~p~~-~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l 72 (92)
T 3ztg_A 11 PDELLCLICKDIM--TDAVV-IPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFL 72 (92)
T ss_dssp CTTTEETTTTEEC--SSCEE-CTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTTSCEECHHH
T ss_pred CcCCCCCCCChhh--cCceE-CCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCccccCcCHHH
Confidence 4578999999999 45554 57 9999999999999964 36899999997 44455555554
No 25
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.17 E-value=1e-11 Score=92.26 Aligned_cols=54 Identities=30% Similarity=0.635 Sum_probs=44.8
Q ss_pred CCCccccccccccC----CCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCCC
Q 016591 27 CDDACSICLEDFSE----SDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDP 80 (386)
Q Consensus 27 ed~~C~ICle~f~~----~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~ 80 (386)
++..|+||++.|.. .+.+.+++|+|.||..||..|+..+..||+||..+...+.
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 59 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 59 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTCE
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccce
Confidence 46789999999842 1334777999999999999999999999999999876543
No 26
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.16 E-value=1.7e-11 Score=102.63 Aligned_cols=52 Identities=25% Similarity=0.636 Sum_probs=43.7
Q ss_pred cCCCccccccccccCC---------------CCceeccCCccccHHHHHHHHhcCCCCCCccccCCC
Q 016591 26 ACDDACSICLEDFSES---------------DPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~---------------~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
.+++.|+||++.|... .++.+++|+|.||..||..|+..+..||+||+.|.+
T Consensus 35 ~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 35 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 101 (106)
T ss_dssp SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCE
T ss_pred CCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCccee
Confidence 4578899999998432 135667999999999999999999999999998754
No 27
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=2.6e-11 Score=91.55 Aligned_cols=51 Identities=24% Similarity=0.516 Sum_probs=42.7
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHh-cCCCCCCccccCCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ-RSSQCPMCWQPISLKD 79 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq-~s~~CPlCR~~i~~kd 79 (386)
.++..|+||++.+ .+++. ++|+|.||..||..|+. ....||+||+.+...+
T Consensus 13 ~~~~~C~IC~~~~--~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 64 (66)
T 2ecy_A 13 EDKYKCEKCHLVL--CSPKQ-TECGHRFCESCMAALLSSSSPKCTACQESIVKDK 64 (66)
T ss_dssp CCCEECTTTCCEE--SSCCC-CSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTT
T ss_pred CcCCCCCCCChHh--cCeeE-CCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhh
Confidence 4578899999999 45544 69999999999999994 5678999999987654
No 28
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.14 E-value=2.6e-11 Score=94.62 Aligned_cols=52 Identities=29% Similarity=0.689 Sum_probs=43.5
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhc------CCCCCCccccCCCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR------SSQCPMCWQPISLKDP 80 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~------s~~CPlCR~~i~~kd~ 80 (386)
.+++.|+||++.| .+++ +++|+|.||..||..|+.. ...||+||..+...++
T Consensus 17 ~~~~~C~IC~~~~--~~p~-~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~ 74 (85)
T 2ecw_A 17 KEEVTCPICLELL--KEPV-SADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNL 74 (85)
T ss_dssp CTTTSCTTTCSCC--SSCE-ECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCC
T ss_pred ccCCCCcCCChhh--Ccce-eCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhC
Confidence 4578899999998 4444 5699999999999999986 6789999999876543
No 29
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.14 E-value=2.7e-11 Score=93.84 Aligned_cols=51 Identities=25% Similarity=0.482 Sum_probs=41.9
Q ss_pred cCCCccccccccccCCCCceecc-CCccccHHHHHHHHhcC--CCCCCccccCCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTS-CKHEFHLQCILEWCQRS--SQCPMCWQPISLKD 79 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~-CgH~FC~~CI~~Wlq~s--~~CPlCR~~i~~kd 79 (386)
.+++.|+||++.| .+++. ++ |+|.||..||..|+... ..||+||+.+...+
T Consensus 13 ~~~~~C~IC~~~~--~~p~~-~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 13 PDELLCLICKDIM--TDAVV-IPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPD 66 (74)
T ss_dssp CGGGSCSSSCCCC--TTCEE-CSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTT
T ss_pred CCCCCCcCCChHH--hCCeE-cCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcc
Confidence 4578899999999 45555 57 99999999999999855 68999999865443
No 30
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=1e-11 Score=94.65 Aligned_cols=52 Identities=29% Similarity=0.797 Sum_probs=44.3
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCC
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKD 79 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd 79 (386)
+...+..|+||++.+ .+ .+++|+|.||..||..|+.....||+||+.+...+
T Consensus 11 ~~~~~~~C~IC~~~~--~~--~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (70)
T 2ecn_A 11 QLTDEEECCICMDGR--AD--LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 62 (70)
T ss_dssp CCCCCCCCSSSCCSC--CS--EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCC
T ss_pred cCCCCCCCeeCCcCc--cC--cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCC
Confidence 335578899999998 33 66799999999999999999999999999987543
No 31
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.12 E-value=3.9e-11 Score=98.80 Aligned_cols=61 Identities=11% Similarity=0.095 Sum_probs=51.5
Q ss_pred cCCCccccccccccCCCCceeccCC-ccccHHHHHHHHhcCCCCCCccccCCCCCCChHHHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCK-HEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAV 89 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~Cg-H~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~~~~~ll~av 89 (386)
.+++.|+||++.| .+| ++++|| |.||..||..|+.....||+|++++...++.++..+...
T Consensus 20 p~~~~CpI~~~~m--~dP-V~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~pn~~Lk~~ 81 (98)
T 1wgm_A 20 CDEFLDPIMSTLM--CDP-VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEK 81 (98)
T ss_dssp CTTTBCTTTCSBC--SSE-EECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEECHHHHHH
T ss_pred cHhcCCcCccccc--cCC-eECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhceEcHHHHHH
Confidence 4588999999999 455 455999 999999999999988899999999998888777666433
No 32
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.12 E-value=3.6e-11 Score=96.28 Aligned_cols=59 Identities=14% Similarity=0.003 Sum_probs=49.9
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCCCChHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLE 87 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~~~~~ll~ 87 (386)
.+++.|+||++.| .+|+ +++|||.||..||..|+.....||+|++.+...++.++..+.
T Consensus 12 p~~~~CpI~~~~m--~dPV-~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~pn~~L~ 70 (85)
T 2kr4_A 12 PDEFRDPLMDTLM--TDPV-RLPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELK 70 (85)
T ss_dssp CTTTBCTTTCSBC--SSEE-ECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHH
T ss_pred chheECcccCchh--cCCe-ECCCCCEECHHHHHHHHhcCCCCCCCcCCCChHhcchHHHHH
Confidence 3589999999999 4554 458999999999999999888999999999887777766553
No 33
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=3.5e-11 Score=93.84 Aligned_cols=52 Identities=27% Similarity=0.631 Sum_probs=43.4
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhc------CCCCCCccccCCCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR------SSQCPMCWQPISLKDP 80 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~------s~~CPlCR~~i~~kd~ 80 (386)
.++..|+||++.| .++ ..++|+|.||..||..|+.. ...||+||..+...++
T Consensus 17 ~~~~~C~IC~~~~--~~p-~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~ 74 (85)
T 2ecv_A 17 KEEVTCPICLELL--TQP-LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENI 74 (85)
T ss_dssp CCCCCCTTTCSCC--SSC-BCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSC
T ss_pred cCCCCCCCCCccc--CCc-eeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhc
Confidence 4578899999998 444 44599999999999999976 7899999999876543
No 34
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.11 E-value=5.1e-11 Score=98.44 Aligned_cols=61 Identities=13% Similarity=0.015 Sum_probs=51.7
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCCCChHHHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAV 89 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~~~~~ll~av 89 (386)
.+++.|+||++.| .+|+. ++|||.||..||..|+.....||+|+.++...++.++..+...
T Consensus 27 p~~~~CpI~~~~m--~dPV~-~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~pn~~Lk~~ 87 (100)
T 2kre_A 27 PDEFRDPLMDTLM--TDPVR-LPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQ 87 (100)
T ss_dssp STTTBCTTTCSBC--SSEEE-ETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEECHHHHHH
T ss_pred cHhhCCcCccCcc--cCCeE-CCCCCEEchHHHHHHHHcCCCCCCCCCCCChhhceECHHHHHH
Confidence 4588999999999 55555 5899999999999999988899999999998888877666443
No 35
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.10 E-value=7.7e-11 Score=103.86 Aligned_cols=61 Identities=21% Similarity=0.423 Sum_probs=49.0
Q ss_pred CCCccccccccccCCCCceeccCCccccHHHHHHHHhcC-CCCCCccccCCCC-CCChHHHHHHHH
Q 016591 27 CDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS-SQCPMCWQPISLK-DPTSQELLEAVE 90 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s-~~CPlCR~~i~~k-d~~~~~ll~ave 90 (386)
+++.|+||++.| .++ ++++|+|.||..||..|+... ..||+||..+... .+..+..+..+.
T Consensus 77 ~~~~C~IC~~~~--~~p-v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~n~~l~~lv 139 (150)
T 1z6u_A 77 QSFMCVCCQELV--YQP-VTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQNYIMIPNEILQTLL 139 (150)
T ss_dssp HHTBCTTTSSBC--SSE-EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCBCHHHHHHH
T ss_pred cCCEeecCChhh--cCC-EEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCCCCCCCCHHHHHHH
Confidence 468899999999 444 456999999999999999865 4899999999877 666666664444
No 36
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.10 E-value=1.3e-11 Score=95.71 Aligned_cols=51 Identities=29% Similarity=0.623 Sum_probs=42.6
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhc-------CCCCCCccccCCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-------SSQCPMCWQPISLKD 79 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-------s~~CPlCR~~i~~kd 79 (386)
.+++.|+||++.| .+++ .++|+|.||..||..|+.. ...||+||..+...+
T Consensus 10 ~~~~~C~IC~~~~--~~p~-~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 67 (79)
T 2egp_A 10 QEEVTCPICLELL--TEPL-SLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEH 67 (79)
T ss_dssp CCCCEETTTTEEC--SSCC-CCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSG
T ss_pred ccCCCCcCCCccc--CCee-ECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhh
Confidence 4578899999999 4444 4699999999999999976 578999999987543
No 37
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.08 E-value=3e-11 Score=107.05 Aligned_cols=61 Identities=25% Similarity=0.596 Sum_probs=47.2
Q ss_pred CCCccccccccccCCCCceeccCCccccHHHHHHHHhc-CCCCCCccccCCCC-CCChHHHHHHH
Q 016591 27 CDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-SSQCPMCWQPISLK-DPTSQELLEAV 89 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-s~~CPlCR~~i~~k-d~~~~~ll~av 89 (386)
.++.|+||++.| .+++.+++|+|.||..||..|+.. ...||+||..+... .+..+..+..+
T Consensus 53 ~~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~~~~l~~~ 115 (165)
T 2ckl_B 53 SELMCPICLDML--KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDAL 115 (165)
T ss_dssp HHHBCTTTSSBC--SSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSGGGEEECHHHHHH
T ss_pred CCCCCcccChHh--hCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCcccCCcCHHHHHH
Confidence 466899999999 556666699999999999999986 78899999998543 33444444433
No 38
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=1.3e-10 Score=86.82 Aligned_cols=43 Identities=33% Similarity=0.818 Sum_probs=36.3
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHh---cCCCCCCc
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ---RSSQCPMC 71 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq---~s~~CPlC 71 (386)
.+++.|+||++.| .++ ++++|+|.||..||..|+. ....||+|
T Consensus 18 ~~~~~C~IC~~~~--~~p-~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDIL--QKP-VTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBC--SSC-EECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchh--CCe-EEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 4578999999999 445 4459999999999999997 45689998
No 39
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.05 E-value=8.6e-11 Score=98.67 Aligned_cols=57 Identities=26% Similarity=0.599 Sum_probs=47.4
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCCCChHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELL 86 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~~~~~ll 86 (386)
.+++.|+||++.| .+++.+.+|||.||..||..|+. ..||+||..+...++..+..+
T Consensus 20 ~~~~~C~IC~~~~--~~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~~~~n~~l 76 (117)
T 1jm7_B 20 EKLLRCSRCTNIL--REPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDLKINRQL 76 (117)
T ss_dssp HHTTSCSSSCSCC--SSCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSCCCCHHH
T ss_pred hhCCCCCCCChHh--hCccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCccccccccHHH
Confidence 3478999999999 55655559999999999999998 789999999987777665554
No 40
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.04 E-value=1e-10 Score=88.01 Aligned_cols=54 Identities=20% Similarity=0.520 Sum_probs=42.1
Q ss_pred CCCccccccc-cccCCC-CceeccCCccccHHHHHHHHhc-CCCCCCccccCCCCCC
Q 016591 27 CDDACSICLE-DFSESD-PSTLTSCKHEFHLQCILEWCQR-SSQCPMCWQPISLKDP 80 (386)
Q Consensus 27 ed~~C~ICle-~f~~~~-pv~ll~CgH~FC~~CI~~Wlq~-s~~CPlCR~~i~~kd~ 80 (386)
++..|+||++ .|.... ...+++|||.||..||..|+.. ...||+||..+...++
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~ 58 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNF 58 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCC
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccc
Confidence 4678999999 773221 1246799999999999999764 5689999999986654
No 41
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.03 E-value=5.1e-11 Score=98.24 Aligned_cols=51 Identities=35% Similarity=0.716 Sum_probs=42.1
Q ss_pred CCCccccccccccCCCCceeccCCccccHHHHHHHHhcC---CCCCCccccCCCCCC
Q 016591 27 CDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS---SQCPMCWQPISLKDP 80 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s---~~CPlCR~~i~~kd~ 80 (386)
.+..|+||++.| .+++. ++|+|.||..||..|+... ..||+||..+...++
T Consensus 20 ~~~~C~IC~~~~--~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~ 73 (112)
T 1jm7_A 20 KILECPICLELI--KEPVS-TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73 (112)
T ss_dssp HHTSCSSSCCCC--SSCCB-CTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTC
T ss_pred CCCCCcccChhh--cCeEE-CCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhc
Confidence 367899999998 44444 6999999999999999864 489999999876544
No 42
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.03 E-value=2.7e-11 Score=103.29 Aligned_cols=53 Identities=25% Similarity=0.633 Sum_probs=1.6
Q ss_pred cCCCccccccccccCC---------------CCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 26 ACDDACSICLEDFSES---------------DPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~---------------~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
..++.|+||++.|... ..+..++|+|.||..||..|+..+..||+||+.|.+.
T Consensus 46 ~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~~~ 113 (117)
T 4a0k_B 46 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQ 113 (117)
T ss_dssp CCC-----------------------------------------------------------------
T ss_pred CCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeeeee
Confidence 3567899999998431 1234468999999999999999999999999987643
No 43
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.00 E-value=1.2e-10 Score=97.83 Aligned_cols=64 Identities=19% Similarity=0.405 Sum_probs=49.5
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCC-CCCCccccCCCCCCChHHHHHHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSS-QCPMCWQPISLKDPTSQELLEAVERE 92 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~-~CPlCR~~i~~kd~~~~~ll~ave~e 92 (386)
.+++.|+||++.| .++ +.++|+|.||..||..|+.... .||+||..+...+......+......
T Consensus 16 ~~~~~C~IC~~~~--~~p-~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~i~~ 80 (118)
T 3hct_A 16 ESKYECPICLMAL--REA-VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILS 80 (118)
T ss_dssp CGGGBCTTTCSBC--SSE-EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHHT
T ss_pred CCCCCCCcCChhh--cCe-EECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccCHHHHHHHcc
Confidence 4578999999999 444 5569999999999999998654 89999999987665555555444433
No 44
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.00 E-value=5.7e-11 Score=99.10 Aligned_cols=49 Identities=29% Similarity=0.704 Sum_probs=41.4
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc-CCCCCCccccCC
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-SSQCPMCWQPIS 76 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-s~~CPlCR~~i~ 76 (386)
..+++.|+||++.| .++++ ++|+|.||..||..|+.. ...||+||+.+.
T Consensus 12 ~~~~~~C~iC~~~~--~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 12 SLSECQCGICMEIL--VEPVT-LPCNHTLCKPCFQSTVEKASLCCPFCRRRVS 61 (115)
T ss_dssp CHHHHBCTTTCSBC--SSCEE-CTTSCEECHHHHCCCCCTTTSBCTTTCCBCH
T ss_pred CCCCCCCccCCccc--CceeE-cCCCCHHhHHHHHHHHhHCcCCCCCCCcccC
Confidence 34578999999999 45544 599999999999999975 678999999886
No 45
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.98 E-value=1.8e-10 Score=96.66 Aligned_cols=54 Identities=30% Similarity=0.664 Sum_probs=45.0
Q ss_pred cCCCccccccccccC----CCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCC
Q 016591 26 ACDDACSICLEDFSE----SDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKD 79 (386)
Q Consensus 26 ~ed~~C~ICle~f~~----~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd 79 (386)
.++..|+||++.|.+ +..+++++|||.||..||..|+.....||+||+.+...+
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 62 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTC
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCcccc
Confidence 357889999999832 123377899999999999999999999999999997654
No 46
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=2.7e-10 Score=90.67 Aligned_cols=55 Identities=27% Similarity=0.688 Sum_probs=44.9
Q ss_pred CCccCCCccccccccccCCCCceeccCC-----ccccHHHHHHHHhcC--CCCCCccccCCCC
Q 016591 23 IQDACDDACSICLEDFSESDPSTLTSCK-----HEFHLQCILEWCQRS--SQCPMCWQPISLK 78 (386)
Q Consensus 23 iqd~ed~~C~ICle~f~~~~pv~ll~Cg-----H~FC~~CI~~Wlq~s--~~CPlCR~~i~~k 78 (386)
....++..|.||++.|..++++ +++|. |.||..||..|+..+ ..||+||..|...
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~ 71 (80)
T 2d8s_A 10 ITPSSQDICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIME 71 (80)
T ss_dssp CCCTTSCCCSSSCCCCCSSSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCC
T ss_pred CCCCCCCCCeEcCccccCCCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecC
Confidence 3455678899999998665665 57996 999999999999754 5899999998754
No 47
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=3.1e-10 Score=82.82 Aligned_cols=43 Identities=37% Similarity=1.052 Sum_probs=35.7
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHh---cCCCCCCc
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ---RSSQCPMC 71 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq---~s~~CPlC 71 (386)
.++..|+||++.| .++ ++++|+|.||..||..|+. ....||+|
T Consensus 13 ~~~~~C~IC~~~~--~~p-~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYL--KEP-VIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBC--SSC-CCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCccc--Ccc-EeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 4578899999999 444 4569999999999999954 56789998
No 48
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.96 E-value=5e-10 Score=90.98 Aligned_cols=63 Identities=22% Similarity=0.441 Sum_probs=49.2
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcC------CCCCC--cccc-CCCCCCChHHHHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS------SQCPM--CWQP-ISLKDPTSQELLEAVE 90 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s------~~CPl--CR~~-i~~kd~~~~~ll~ave 90 (386)
..++.|+||++.| .+|+++..|||.||..||..|+... ..||+ |+.. +...++.++..+..+.
T Consensus 5 ~~~~~CPI~~~~~--~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~pn~~L~~~I 76 (94)
T 2yu4_A 5 SSGFTCPITKEEM--KKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQDEALRRAI 76 (94)
T ss_dssp SSCCBCTTTCSBC--SSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEECHHHHHHH
T ss_pred CcEeECcCcCchh--cCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcCCHHHHHHH
Confidence 4578999999999 5565553599999999999999753 58999 9877 7777777776664443
No 49
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.93 E-value=7.7e-10 Score=87.54 Aligned_cols=54 Identities=19% Similarity=0.448 Sum_probs=41.9
Q ss_pred ccCCCccccccccccCCCCceecc--CCccccHHHHHHHHh-cCCCCCCccccCCCCC
Q 016591 25 DACDDACSICLEDFSESDPSTLTS--CKHEFHLQCILEWCQ-RSSQCPMCWQPISLKD 79 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~--CgH~FC~~CI~~Wlq-~s~~CPlCR~~i~~kd 79 (386)
.+++..|+||++.+...+ +..++ |||.||..||..|+. ....||+||+.+....
T Consensus 8 ~~~~~~CpICle~~~~~d-~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDD-INFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP 64 (78)
T ss_dssp CCCCCBCTTTCCBCCTTT-TTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCS
T ss_pred cccCCcCCccCccCcccc-ccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 355789999999884333 33334 999999999999985 4578999999987654
No 50
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.93 E-value=5.1e-10 Score=104.98 Aligned_cols=63 Identities=17% Similarity=0.166 Sum_probs=50.5
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc-CCCCCCccccCCCCCCChHHHHHHHH
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-SSQCPMCWQPISLKDPTSQELLEAVE 90 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-s~~CPlCR~~i~~kd~~~~~ll~ave 90 (386)
...++.|+||++.| .+|+ +++|||.||..||..|+.. ...||+|+.++...++.++..+..+.
T Consensus 205 ~~~~~~c~i~~~~~--~dPv-~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n~~l~~~i 268 (281)
T 2c2l_A 205 IPDYLCGKISFELM--REPC-ITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVI 268 (281)
T ss_dssp CCSTTBCTTTCSBC--SSEE-ECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHH
T ss_pred CCcccCCcCcCCHh--cCCe-ECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCcccHHHHHHH
Confidence 34688999999999 5554 5589999999999999975 44599999999887777776664433
No 51
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.89 E-value=3.5e-10 Score=94.45 Aligned_cols=52 Identities=38% Similarity=0.645 Sum_probs=43.6
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhc-CCCCCCccccCCCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-SSQCPMCWQPISLKDP 80 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-s~~CPlCR~~i~~kd~ 80 (386)
.+++.|+||++.| .++ +.++|||.||..||..|+.. ...||+||..+...++
T Consensus 21 ~~~~~C~IC~~~~--~~p-~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~ 73 (116)
T 1rmd_A 21 VKSISCQICEHIL--ADP-VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDL 73 (116)
T ss_dssp HHHTBCTTTCSBC--SSE-EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGC
T ss_pred cCCCCCCCCCcHh--cCc-EEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhc
Confidence 3478899999999 444 44699999999999999986 6789999999876554
No 52
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=3.5e-09 Score=83.37 Aligned_cols=51 Identities=22% Similarity=0.551 Sum_probs=41.9
Q ss_pred CCCccccccccccCCCCceeccCCccccHHHHHHHHhcC--CCCCCccccCCCCC
Q 016591 27 CDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS--SQCPMCWQPISLKD 79 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s--~~CPlCR~~i~~kd 79 (386)
....|.||++.|..+ .....|+|.||..||..||+.+ ..||+|+..|....
T Consensus 14 ~i~~C~IC~~~i~~g--~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~~ 66 (74)
T 2ct0_A 14 AVKICNICHSLLIQG--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEI 66 (74)
T ss_dssp SSCBCSSSCCBCSSS--EECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSCC
T ss_pred CCCcCcchhhHcccC--CccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCCC
Confidence 346799999999543 3444899999999999999876 89999999987653
No 53
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.82 E-value=8.9e-10 Score=92.45 Aligned_cols=56 Identities=29% Similarity=0.630 Sum_probs=46.1
Q ss_pred CccCCCccccccccccC----CCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCC
Q 016591 24 QDACDDACSICLEDFSE----SDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKD 79 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~----~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd 79 (386)
.+..+..|+||++.|.. ...+..++|+|.||..||.+|+.....||+||..+..++
T Consensus 68 i~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 127 (133)
T 4ap4_A 68 IGSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 127 (133)
T ss_dssp CSSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred cCCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChhc
Confidence 45667889999999832 123477799999999999999999999999999987554
No 54
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.80 E-value=2.7e-09 Score=80.87 Aligned_cols=49 Identities=24% Similarity=0.534 Sum_probs=40.9
Q ss_pred ccCCCccccccccccCCCCceec--cCCcc-ccHHHHHHHHhcCCCCCCccccCC
Q 016591 25 DACDDACSICLEDFSESDPSTLT--SCKHE-FHLQCILEWCQRSSQCPMCWQPIS 76 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll--~CgH~-FC~~CI~~Wlq~s~~CPlCR~~i~ 76 (386)
..++..|.||++.+ .+ +.++ +|||. ||..|+..|+.....||+||+.+.
T Consensus 5 ~~~~~~C~IC~~~~--~~-~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 5 LNAIEPCVICQGRP--KN-GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp CGGGSCCTTTSSSC--SC-EEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred CCCcCCCCcCCCCC--CC-EEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 34577899999987 33 4444 99999 899999999998889999999885
No 55
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.80 E-value=1.2e-09 Score=95.33 Aligned_cols=50 Identities=18% Similarity=0.442 Sum_probs=41.6
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcC-CCCCCccccCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS-SQCPMCWQPISLK 78 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s-~~CPlCR~~i~~k 78 (386)
++++.|+||++.| .++ +.++|||.||..||..|+... ..||+||.++...
T Consensus 29 ~~~~~C~IC~~~~--~~p-v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 79 (141)
T 3knv_A 29 EAKYLCSACRNVL--RRP-FQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYE 79 (141)
T ss_dssp CGGGBCTTTCSBC--SSE-EECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCCC
T ss_pred CcCcCCCCCChhh--cCc-EECCCCCccCHHHHHHHHhcCCCCCCCCCCccccc
Confidence 4578999999999 455 556999999999999999855 4899999987543
No 56
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.79 E-value=3e-09 Score=96.81 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=50.0
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcC-CCCCCccccCCCCCCChHHHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS-SQCPMCWQPISLKDPTSQELLEAV 89 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s-~~CPlCR~~i~~kd~~~~~ll~av 89 (386)
..++.|+||++.| .+| ++++|||.||..||..|+... ..||+|+.++...++.++..+...
T Consensus 104 p~~f~CPI~~elm--~DP-V~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~pN~~Lk~~ 165 (179)
T 2f42_A 104 PDYLCGKISFELM--REP-CITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEV 165 (179)
T ss_dssp CGGGBCTTTCSBC--SSE-EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECHHHHHH
T ss_pred cHhhcccCccccC--CCC-eECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCcchHHHHHH
Confidence 4588999999999 455 445999999999999999753 469999999988888777666443
No 57
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.79 E-value=1.2e-09 Score=80.50 Aligned_cols=48 Identities=27% Similarity=0.548 Sum_probs=39.3
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
+.+++.|+||++.| .++ ++++|+|.||..||..| ...||+||+.+...
T Consensus 3 e~~~~~C~IC~~~~--~~p-~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~~~ 50 (56)
T 1bor_A 3 EFQFLRCQQCQAEA--KCP-KLLPCLHTLCSGCLEAS---GMQCPICQAPWPLG 50 (56)
T ss_dssp SCCCSSCSSSCSSC--BCC-SCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCC
T ss_pred cccCCCceEeCCcc--CCe-EEcCCCCcccHHHHccC---CCCCCcCCcEeecC
Confidence 45678899999999 344 55699999999999774 56899999998754
No 58
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.75 E-value=2.9e-09 Score=94.46 Aligned_cols=62 Identities=19% Similarity=0.426 Sum_probs=48.4
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcC-CCCCCccccCCCCCCChHHHHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS-SQCPMCWQPISLKDPTSQELLEAVE 90 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s-~~CPlCR~~i~~kd~~~~~ll~ave 90 (386)
.+++.|+||++.| .++ +.++|||.||..||..|+... ..||+||..+...++.....+....
T Consensus 16 ~~~~~C~IC~~~~--~~p-v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~i 78 (170)
T 3hcs_A 16 ESKYECPICLMAL--REA-VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREI 78 (170)
T ss_dssp CGGGBCTTTCSBC--SSE-EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHH
T ss_pred CCCCCCCCCChhh--cCc-EECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhhHHHHHHH
Confidence 4578999999999 445 456999999999999999754 4899999999876655554444433
No 59
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.71 E-value=2.6e-09 Score=82.97 Aligned_cols=45 Identities=27% Similarity=0.651 Sum_probs=37.9
Q ss_pred cCCCccccccccccCCCCceeccCCcc-ccHHHHHHHHhcCCCCCCccccCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHE-FHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~-FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
.++..|+||++.+ ..+..++|+|. ||..|+..| ..||+||+.+..
T Consensus 22 ~~~~~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 22 QEEKLCKICMDRN---IAIVFVPCGHLVTCKQCAEAV----DKCPMCYTVITF 67 (74)
T ss_dssp HHHTBCTTTSSSB---CCEEEETTCCBCCCHHHHTTC----SBCTTTCCBCSE
T ss_pred ccCCCCCCCCCCC---CCEEEcCCCChhHHHHhhhcC----ccCCCcCcCccC
Confidence 3467899999998 34556699999 999999998 789999998863
No 60
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.71 E-value=7.1e-09 Score=104.44 Aligned_cols=48 Identities=25% Similarity=0.635 Sum_probs=41.4
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHh-cCCCCCCccccCCCC
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ-RSSQCPMCWQPISLK 78 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq-~s~~CPlCR~~i~~k 78 (386)
+..|+||++.+ ..++.++|||.||..||..|+. ....||+||..+...
T Consensus 332 ~~~C~ICle~~---~~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 332 FQLCKICAEND---KDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGT 380 (389)
T ss_dssp SSBCTTTSSSB---CCEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEE
T ss_pred CCCCCccCcCC---CCeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCc
Confidence 46899999998 4456679999999999999998 678999999988643
No 61
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.71 E-value=3.3e-09 Score=101.69 Aligned_cols=60 Identities=25% Similarity=0.529 Sum_probs=51.0
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcC--CCCCC--ccccCCCCCCChHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS--SQCPM--CWQPISLKDPTSQELLE 87 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s--~~CPl--CR~~i~~kd~~~~~ll~ 87 (386)
..++.||||++.| .+|++.+.|||.||..||..|+... ..||+ |++.+...++.++..+.
T Consensus 179 ~~el~CPIcl~~f--~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~pN~~L~ 242 (267)
T 3htk_C 179 KIELTCPITCKPY--EAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVRDPIME 242 (267)
T ss_dssp BCCSBCTTTSSBC--SSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEEECHHHH
T ss_pred ceeeECcCccCcc--cCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCCcCHHHH
Confidence 4578899999999 7788777999999999999999754 57999 99999888877766653
No 62
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.69 E-value=9.7e-09 Score=77.58 Aligned_cols=48 Identities=21% Similarity=0.479 Sum_probs=39.8
Q ss_pred cCCCccccccccccCCCCceec--cCCcc-ccHHHHHHHHhcCCCCCCccccCC
Q 016591 26 ACDDACSICLEDFSESDPSTLT--SCKHE-FHLQCILEWCQRSSQCPMCWQPIS 76 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll--~CgH~-FC~~CI~~Wlq~s~~CPlCR~~i~ 76 (386)
..+..|.||++.+ .+ ..++ +|||. ||..|+..|++....||+||+.+.
T Consensus 5 ~~~~~C~IC~~~~--~~-~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 5 NLLKPCSLCEKRP--RD-GNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GGGSBCTTTSSSB--SC-EEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred CcCCCCcccCCcC--CC-eEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 3467899999987 23 3444 99998 999999999988889999999885
No 63
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.56 E-value=1.7e-08 Score=78.33 Aligned_cols=45 Identities=27% Similarity=0.662 Sum_probs=36.6
Q ss_pred cCCCccccccccccCCCCceeccCCcc-ccHHHHHHHHhcCCCCCCccccCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHE-FHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~-FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
.++..|+||++.+ ..+++++|+|. ||..|+.. ...||+||..+..
T Consensus 23 ~~~~~C~IC~~~~---~~~~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 23 QEEKLCKICMDRN---IAIVFVPCGHLVTCKQCAEA----VDKCPMCYTVITF 68 (75)
T ss_dssp HHHHSCSSSCSSC---CCBCCSSSCCCCBCHHHHHH----CSBCTTTCCBCCC
T ss_pred CCCCCCCcCCCCC---CCEEEecCCCHHHHHHHhhC----CCCCccCCceecC
Confidence 3467899999998 34566799999 99999964 3789999998864
No 64
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=1e-07 Score=73.17 Aligned_cols=47 Identities=26% Similarity=0.557 Sum_probs=38.7
Q ss_pred CccCCCccccccccccCCCCceeccCCcc-ccHHHHHHHHhcCCCCCCccccCCC
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHE-FHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~-FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
.+.++..|.||++.+ ..+.+++|+|. ||..|+.. ...||+||+.|..
T Consensus 11 ~~~~~~~C~IC~~~~---~~~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 11 SEENSKDCVVCQNGT---VNWVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQE 58 (68)
T ss_dssp SCCCSSCCSSSSSSC---CCCEETTTTBCCSCTTHHHH----CSSCTTTCCCCCC
T ss_pred cCCCCCCCCCcCcCC---CCEEEECCCChhhhHHHHhc----CCCCCCCCcchhc
Confidence 445578899999987 45677799999 99999974 4789999998864
No 65
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.45 E-value=2.3e-08 Score=80.58 Aligned_cols=48 Identities=21% Similarity=0.652 Sum_probs=37.1
Q ss_pred CCCccccccccccCCCCceeccCCccccHHHHHHHHhc--------CCCCCC--cccc
Q 016591 27 CDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR--------SSQCPM--CWQP 74 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~--------s~~CPl--CR~~ 74 (386)
.+.+|+||++.+...+.+.+.+|+|.||..||..|+.. ...||. |+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 46789999999843222344579999999999999853 237999 9988
No 66
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.42 E-value=7.5e-08 Score=72.67 Aligned_cols=51 Identities=14% Similarity=0.266 Sum_probs=42.2
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCCCC
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDP 80 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~ 80 (386)
.+.|+||++.+ .+|+...+|||.|+..||.+|+..+..||++++++...++
T Consensus 3 ~~~CpIs~~~m--~dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~L 53 (61)
T 2bay_A 3 HMLCAISGKVP--RRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEI 53 (61)
T ss_dssp -CCCTTTCSCC--SSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGC
T ss_pred eEEecCCCCCC--CCCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhhc
Confidence 46799999999 4554443899999999999999877789999999876654
No 67
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.41 E-value=5.5e-08 Score=76.72 Aligned_cols=44 Identities=25% Similarity=0.560 Sum_probs=36.6
Q ss_pred CCCccccccccccCCCCceeccCCcc-ccHHHHHHHHhcCCCCCCccccCCC
Q 016591 27 CDDACSICLEDFSESDPSTLTSCKHE-FHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~CgH~-FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
++..|.||++.+ ..+.+++|||. ||..|+..| ..||+||..+..
T Consensus 17 ~~~~C~IC~~~~---~~~v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 61 (79)
T 2yho_A 17 EAMLCMVCCEEE---INSTFCPCGHTVCCESCAAQL----QSCPVCRSRVEH 61 (79)
T ss_dssp HHTBCTTTSSSB---CCEEEETTCBCCBCHHHHTTC----SBCTTTCCBCCE
T ss_pred CCCEeEEeCccc---CcEEEECCCCHHHHHHHHHhc----CcCCCCCchhhC
Confidence 367899999988 44566799999 999999877 389999998863
No 68
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.34 E-value=3.4e-07 Score=68.88 Aligned_cols=51 Identities=22% Similarity=0.582 Sum_probs=40.0
Q ss_pred CccCCCccccccccccCCCCceeccCC--c---cccHHHHHHHHhc--CCCCCCccccCCC
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCK--H---EFHLQCILEWCQR--SSQCPMCWQPISL 77 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~Cg--H---~FC~~CI~~Wlq~--s~~CPlCR~~i~~ 77 (386)
+++++..|.||++.. ++++ ++||. + .||..||..|+.. +..||+|+..|..
T Consensus 2 e~~~~~~CrIC~~~~--~~~l-~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 2 EDEDVPVCWICNEEL--GNER-FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp TTCSCCEETTTTEEC--SCCC-CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCCCEeEEeecCC--CCce-ecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 456778899999975 3444 56854 4 8999999999963 6789999998864
No 69
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.28 E-value=1.6e-07 Score=93.17 Aligned_cols=53 Identities=26% Similarity=0.615 Sum_probs=40.0
Q ss_pred CccCCCccccccccccCCCCc-----eeccCCccccHHHHHHHHhcC-----------CCCCCccccCC
Q 016591 24 QDACDDACSICLEDFSESDPS-----TLTSCKHEFHLQCILEWCQRS-----------SQCPMCWQPIS 76 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv-----~ll~CgH~FC~~CI~~Wlq~s-----------~~CPlCR~~i~ 76 (386)
.++...+|+||+..+.....+ ....|+|.||..||.+|++.. ..||+||+++.
T Consensus 304 ~ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 304 EDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CCCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred cccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 344567799999998652221 124799999999999999642 46999999886
No 70
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.25 E-value=1.7e-07 Score=93.13 Aligned_cols=45 Identities=20% Similarity=0.561 Sum_probs=37.7
Q ss_pred cCCCccccccccccCCCCceeccCCcc-ccHHHHHHHHhcCCCCCCccccCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHE-FHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~-FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
.++..|+||++.+ ..++.++|||. ||..|+..| ..||+||..+..
T Consensus 293 ~~~~~C~IC~~~~---~~~v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~ 338 (345)
T 3t6p_A 293 QEERTCKVCMDKE---VSVVFIPCGHLVVCQECAPSL----RKCPICRGIIKG 338 (345)
T ss_dssp HTTCBCTTTSSSB---CCEEEETTCCEEECTTTGGGC----SBCTTTCCBCCE
T ss_pred cCCCCCCccCCcC---CceEEcCCCChhHhHHHHhcC----CcCCCCCCCccC
Confidence 4578899999998 34555699999 999999988 689999998863
No 71
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.94 E-value=4.4e-06 Score=69.14 Aligned_cols=45 Identities=24% Similarity=0.572 Sum_probs=38.2
Q ss_pred ccccccccccCCCCceeccCCccccHHHHHHHHh-cCCCCCCccccCC
Q 016591 30 ACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ-RSSQCPMCWQPIS 76 (386)
Q Consensus 30 ~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq-~s~~CPlCR~~i~ 76 (386)
.|.+|--.+ ..-.++.||+|.||+.|+..|.+ ..+.||.|+.++.
T Consensus 3 fC~~C~~Pi--~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 3 FCDKCGLPI--KVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQ 48 (101)
T ss_dssp BCTTTCSBC--SEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCS
T ss_pred ecCccCCCe--EEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeee
Confidence 488998777 44568889999999999999985 5689999999886
No 72
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.55 E-value=5.6e-05 Score=71.33 Aligned_cols=51 Identities=24% Similarity=0.597 Sum_probs=40.6
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHhcC--CCCCCccccCCCCCC
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS--SQCPMCWQPISLKDP 80 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s--~~CPlCR~~i~~kd~ 80 (386)
-..|.||.+.+..+ ..+..|+|.||..|+..|++.. ..||.|+..|....+
T Consensus 180 i~~C~iC~~iv~~g--~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~~~ 232 (238)
T 3nw0_A 180 VKICNICHSLLIQG--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIP 232 (238)
T ss_dssp CCBCTTTCSBCSSC--EECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSCCC
T ss_pred CCcCcchhhHHhCC--cccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Confidence 56699999998543 4454599999999999999754 489999999876543
No 73
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=95.57 E-value=0.0057 Score=50.01 Aligned_cols=47 Identities=23% Similarity=0.535 Sum_probs=37.2
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
-..|..|+-.. + -.+.-..|.+|..|+...+..+..||+|+.++..+
T Consensus 28 ~~nCKsCWf~~---k-~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtk 74 (99)
T 2ko5_A 28 PQFCKSCWFEN---K-GLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTK 74 (99)
T ss_dssp CCCCCSSCSCC---S-SEEECSSCEEEHHHHHHTCSSSSEETTTTEECCCC
T ss_pred cccChhhcccc---C-CeeeecchhhHHHHHHHHHhhccCCcccCCcCCcc
Confidence 35599998664 2 23323469999999999999999999999999865
No 74
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=94.87 E-value=0.017 Score=46.27 Aligned_cols=35 Identities=20% Similarity=0.418 Sum_probs=26.0
Q ss_pred CCCccccccccccCCCCc-eeccCCccccHHHHHHHH
Q 016591 27 CDDACSICLEDFSESDPS-TLTSCKHEFHLQCILEWC 62 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv-~ll~CgH~FC~~CI~~Wl 62 (386)
++..|.||++.+. .+++ ..+.|+|.||..|+..|.
T Consensus 2 ee~~C~~C~~~~~-~~av~~C~~C~~~~C~~Cl~~~h 37 (101)
T 2jun_A 2 EKVLCQFCDQDPA-QDAVKTCVTCEVSYCDECLKATH 37 (101)
T ss_dssp CCCBCTTCCSSSC-CBCCEEETTTTEEECHHHHHHHS
T ss_pred CCCCCcCCCCCCC-CCceEECCcCChHHhHHHCHHHh
Confidence 5788999997641 2232 337999999999999843
No 75
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=91.70 E-value=0.15 Score=38.69 Aligned_cols=52 Identities=23% Similarity=0.474 Sum_probs=36.8
Q ss_pred cCCCccCCCccccccccccCCCCceeccCCccccHHHHHHHHhcC----CCCCCccccC
Q 016591 21 GGIQDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRS----SQCPMCWQPI 75 (386)
Q Consensus 21 g~iqd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s----~~CPlCR~~i 75 (386)
+......+..|.||.+. ++-+..-.|...||..|+...+... -.||.|....
T Consensus 5 ~~~~~~~~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 5 GQQNLAPGARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TTTCCCTTCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred cccCCCCCCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 33334456779999864 3555555799999999998877542 4799997644
No 76
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=90.48 E-value=0.2 Score=55.61 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=49.1
Q ss_pred CCCccccccccccCCCCceeccCC-ccccHHHHHHHHhcCCCCCCccccCCCCCCChHHHHHH
Q 016591 27 CDDACSICLEDFSESDPSTLTSCK-HEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEA 88 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~Cg-H~FC~~CI~~Wlq~s~~CPlCR~~i~~kd~~~~~ll~a 88 (386)
+++.|||-++.+ .+|+ +++.| +.|-..+|..|+....+||+=|+++...++.++..+..
T Consensus 890 ~~F~cPIs~~lM--~DPV-ilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~~liPN~~Lk~ 949 (968)
T 3m62_A 890 DEFLDPLMYTIM--KDPV-ILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQ 949 (968)
T ss_dssp GGGBCTTTCSBC--SSEE-ECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEECHHHHH
T ss_pred HHhCCcchhhHH--hCCe-EcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCcccccccHHHHH
Confidence 488899999999 5554 45887 69999999999998899999999998887777766543
No 77
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=86.72 E-value=0.32 Score=36.07 Aligned_cols=50 Identities=20% Similarity=0.571 Sum_probs=35.8
Q ss_pred cCCCccCCCccccccccccCCCCceeccCCccccHHHHHHHHh----cCCCCCCccc
Q 016591 21 GGIQDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ----RSSQCPMCWQ 73 (386)
Q Consensus 21 g~iqd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq----~s~~CPlCR~ 73 (386)
....+..+..|.||... ++-+..-.|...||..|+..-+. ..-.||.|..
T Consensus 4 ~~~~~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 4 GSYETDHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp SCCSSCCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CcccCCCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 34566778899999864 34445557889999999987543 2346999964
No 78
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=85.18 E-value=0.47 Score=47.40 Aligned_cols=61 Identities=25% Similarity=0.441 Sum_probs=43.8
Q ss_pred CCccccccccccCCCCceeccCCccccHHH--HHHHHh--cCCCCCCccccCCCCCCChHHHHHHHH
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQC--ILEWCQ--RSSQCPMCWQPISLKDPTSQELLEAVE 90 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~C--I~~Wlq--~s~~CPlCR~~i~~kd~~~~~ll~ave 90 (386)
.+.|||-+..| ..|++-..|.|.-|++. +..+.. ..-.||+|.+.+...++.....+..+.
T Consensus 249 SL~CPlS~~ri--~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~~dL~ID~~~~~IL 313 (371)
T 3i2d_A 249 SLQCPISYTRM--KYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLAISEFVDDIL 313 (371)
T ss_dssp ESBCTTTSSBC--SSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCGGGEEEBHHHHHHH
T ss_pred eecCCCccccc--cccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCHHHeeEcHHHHHHH
Confidence 46799888887 67888889999855543 333333 245799999999988887766654443
No 79
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=84.80 E-value=0.96 Score=36.02 Aligned_cols=39 Identities=23% Similarity=0.402 Sum_probs=26.5
Q ss_pred cCCCccccccccccCCCCceecc-CCccccHHHHHHHHhc
Q 016591 26 ACDDACSICLEDFSESDPSTLTS-CKHEFHLQCILEWCQR 64 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~-CgH~FC~~CI~~Wlq~ 64 (386)
...+.|.+|.+-+.+..-+.... =.|.||+.|-+..++.
T Consensus 13 ~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 13 SGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHH
T ss_pred CCeeEeecchhhhccCceeeCCCccCCeeeccccHHHHHh
Confidence 44677999999983322122211 2699999999998863
No 80
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=82.95 E-value=0.77 Score=45.71 Aligned_cols=61 Identities=15% Similarity=0.308 Sum_probs=43.6
Q ss_pred CCccccccccccCCCCceeccCCccccHH--HHHHHHhc--CCCCCCccccCCCCCCChHHHHHHHH
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQ--CILEWCQR--SSQCPMCWQPISLKDPTSQELLEAVE 90 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~--CI~~Wlq~--s~~CPlCR~~i~~kd~~~~~ll~ave 90 (386)
.+.|||-+..| ..|++-..|.|.-|++ -+..+... .-.||+|.+.+.+.++.....+..+.
T Consensus 215 SL~CPlS~~ri--~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~~dL~ID~~~~~IL 279 (360)
T 4fo9_A 215 SLMCPLGKMRL--TIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLILDGLFMEIL 279 (360)
T ss_dssp ESBCTTTCSBC--SSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCGGGEEEBHHHHHHH
T ss_pred eeeCCCcccee--ccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCHHHeEEcHHHHHHH
Confidence 45699988887 6788888999985543 33333332 35799999999988887766554443
No 81
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=81.92 E-value=2.4 Score=34.24 Aligned_cols=53 Identities=17% Similarity=0.354 Sum_probs=37.2
Q ss_pred CccCCCccccccccccCC---CC-ceeccCCccccHHHHHHHH-hcCCCCCCccccCC
Q 016591 24 QDACDDACSICLEDFSES---DP-STLTSCKHEFHLQCILEWC-QRSSQCPMCWQPIS 76 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~---~p-v~ll~CgH~FC~~CI~~Wl-q~s~~CPlCR~~i~ 76 (386)
.......|.||-+.+... ++ +....|.--.|..|+.--. +....||.|+..+.
T Consensus 12 ~~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYk 69 (93)
T 1weo_A 12 KNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred cccCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccc
Confidence 333456799999986322 21 2344688889999997443 56789999988875
No 82
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=80.14 E-value=1.9 Score=34.54 Aligned_cols=35 Identities=20% Similarity=0.439 Sum_probs=24.2
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHH
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEW 61 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~W 61 (386)
..|..|.||-.. ..++....--|+-.||..|+.+.
T Consensus 13 ~~D~~C~VC~~~-t~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 13 VNDEMCDVCEVW-TAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTTCCC-CSSCCSSCSSSSSCCCHHHHHHH
T ss_pred CCCcccCccccc-cccceeccccccccccHhhcccc
Confidence 468899999633 22222233348999999999997
No 83
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=78.60 E-value=0.48 Score=42.15 Aligned_cols=46 Identities=22% Similarity=0.529 Sum_probs=33.8
Q ss_pred CCCccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCccccC
Q 016591 27 CDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQPI 75 (386)
Q Consensus 27 ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~~i 75 (386)
.++.|.||.+. ++-+..-.|...||..|+.+.+.. .-.||.|+..-
T Consensus 3 ~~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 56789999864 455555579999999998766543 34699997654
No 84
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=77.86 E-value=0.57 Score=35.72 Aligned_cols=51 Identities=20% Similarity=0.275 Sum_probs=33.2
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHh----cCCCCCCccccCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ----RSSQCPMCWQPIS 76 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq----~s~~CPlCR~~i~ 76 (386)
.+...|.||........-+..-.|..-||..|+..-.. ....||.|...+.
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 34556999987642112233446889999999875443 2457999976553
No 85
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=77.61 E-value=0.71 Score=37.76 Aligned_cols=49 Identities=22% Similarity=0.424 Sum_probs=33.0
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHHh----cCCCCCCcc
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ----RSSQCPMCW 72 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq----~s~~CPlCR 72 (386)
++..++.|.||.+.-...+-+....|...||..|+...+. ..-.||.|+
T Consensus 3 ~~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 3 SGSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 4557889999987631122255567999999999987654 223566664
No 86
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=76.40 E-value=0.38 Score=43.72 Aligned_cols=49 Identities=24% Similarity=0.516 Sum_probs=34.4
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCccccC
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQPI 75 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~~i 75 (386)
.+..++.|.||... ++-+..-.|...||..|+.+.+.. .-.||.|+..-
T Consensus 3 ~d~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 3 DDPNEDWCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CCSSCSSBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 34567889999854 233444468999999999776542 34699997644
No 87
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=75.96 E-value=1.1 Score=35.90 Aligned_cols=51 Identities=27% Similarity=0.567 Sum_probs=36.7
Q ss_pred CCCccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCccccC
Q 016591 22 GIQDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQPI 75 (386)
Q Consensus 22 ~iqd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~~i 75 (386)
...+..+..|.||... ++-+..-.|.-.||..|+.+-+.. .-.||.|...-
T Consensus 19 ~~~d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 19 GTLDDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp CSSSSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred cccCCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 4466778899999864 344555578899999999775543 33699997543
No 88
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=75.23 E-value=0.61 Score=34.52 Aligned_cols=48 Identities=21% Similarity=0.566 Sum_probs=33.8
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCcccc
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQP 74 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~~ 74 (386)
++..+..|.||.+. ++-+..-.|...||..|+..-+.. .-.||.|...
T Consensus 5 ~d~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 5 SDHHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred ccCCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 45568889999863 344555578999999999864432 3469999654
No 89
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=71.93 E-value=0.64 Score=34.85 Aligned_cols=48 Identities=23% Similarity=0.644 Sum_probs=33.8
Q ss_pred CCccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCccc
Q 016591 23 IQDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQ 73 (386)
Q Consensus 23 iqd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~ 73 (386)
..+..+..|.||.+. ++-+..-.|...||..|+.+-+.. .-.||.|..
T Consensus 3 ~~~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 3 MAQKNEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp CCCSCCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred cCCCCCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 345678899999864 344555578999999999754432 336998854
No 90
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=71.08 E-value=3.5 Score=35.76 Aligned_cols=47 Identities=26% Similarity=0.554 Sum_probs=34.1
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHHh-----------cCCCCCCccc
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ-----------RSSQCPMCWQ 73 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq-----------~s~~CPlCR~ 73 (386)
+|..++.|.||.+- ++-+-.-.|-..||..||.+-+. ..-.||+|..
T Consensus 59 ~Dg~~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 59 SDGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp TTSCBCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCCCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 35678889999875 34444557999999999996552 2346999963
No 91
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=68.70 E-value=2.8 Score=32.02 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=25.8
Q ss_pred CccCCCccccccccccCCCCceeccC-CccccHHHHHHH
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSC-KHEFHLQCILEW 61 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~C-gH~FC~~CI~~W 61 (386)
.+++..-|.||.++- .++.+.| +-.||..|+.+.
T Consensus 4 ~~ee~pWC~ICneDA----tlrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 4 GSSGLPWCCICNEDA----TLRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp SCCCCSSCTTTCSCC----CEEETTTTSEEECSSHHHHH
T ss_pred cCcCCCeeEEeCCCC----eEEecCCCCceehHHHHHHH
Confidence 345566699999863 4677788 789999997764
No 92
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=67.88 E-value=2.8 Score=29.39 Aligned_cols=44 Identities=25% Similarity=0.578 Sum_probs=28.9
Q ss_pred ccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCccc
Q 016591 30 ACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQ 73 (386)
Q Consensus 30 ~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~ 73 (386)
.|.||...-..++-+..-.|...||..|+..=+.. .-.||.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 48899865322233445578999999999754432 336999964
No 93
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.51 E-value=0.52 Score=34.17 Aligned_cols=45 Identities=24% Similarity=0.589 Sum_probs=31.5
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCcc
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCW 72 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR 72 (386)
+..+..|.||... ++-+..-.|...||..|+.+-+.. .-.||.|.
T Consensus 6 ~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 6 SGHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp CSSCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCCCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 4567889999874 344555579999999999754432 23577774
No 94
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=64.59 E-value=1.9 Score=34.88 Aligned_cols=45 Identities=20% Similarity=0.298 Sum_probs=29.2
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHh---cCCCCCCccc
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQ---RSSQCPMCWQ 73 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq---~s~~CPlCR~ 73 (386)
...| ||......+.-+..-.|..-||..|+..-+. ....||.|+.
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 3457 8876653333344557899999999864322 2357999963
No 95
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=63.04 E-value=0.94 Score=33.39 Aligned_cols=49 Identities=20% Similarity=0.496 Sum_probs=32.5
Q ss_pred ccCCCccccccccccCCCC-ceeccCCccccHHHHHHHHh-----cCCCCCCccc
Q 016591 25 DACDDACSICLEDFSESDP-STLTSCKHEFHLQCILEWCQ-----RSSQCPMCWQ 73 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~p-v~ll~CgH~FC~~CI~~Wlq-----~s~~CPlCR~ 73 (386)
++++..|+||...+.+... +..-.|..=||..|+.--.. ....||.|+.
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 57 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcC
Confidence 3467789999987632222 33446888899999864321 3567999965
No 96
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=62.95 E-value=1.4 Score=33.72 Aligned_cols=54 Identities=20% Similarity=0.294 Sum_probs=33.9
Q ss_pred cCCCccCCCccccccccccCCCCceeccCCccccHHHHHHH---------HhcCCCCCCccccC
Q 016591 21 GGIQDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEW---------CQRSSQCPMCWQPI 75 (386)
Q Consensus 21 g~iqd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~W---------lq~s~~CPlCR~~i 75 (386)
+...+.....| ||........-+..-.|..=||..|+.-- ......||.|+...
T Consensus 9 ~~~~d~~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 9 CEVYDPNALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCSCCTTCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred ccccCCCCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 33344455667 89887632222344468889999998521 12467899996543
No 97
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=57.85 E-value=5.4 Score=32.04 Aligned_cols=51 Identities=20% Similarity=0.386 Sum_probs=30.3
Q ss_pred CCccCCCccccccccccCCCCceecc--CC-ccccHHHHHHHH--hcCCCCCCccccC
Q 016591 23 IQDACDDACSICLEDFSESDPSTLTS--CK-HEFHLQCILEWC--QRSSQCPMCWQPI 75 (386)
Q Consensus 23 iqd~ed~~C~ICle~f~~~~pv~ll~--Cg-H~FC~~CI~~Wl--q~s~~CPlCR~~i 75 (386)
++..++..| ||..... +.-+..-. |. .-||..|+.--. .....||.|+...
T Consensus 31 ~d~~e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 31 VDPNEPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCSCCCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCC
T ss_pred cCCCCCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcC
Confidence 344556667 9988641 23233334 55 579999986211 1346799997643
No 98
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.17 E-value=0.85 Score=36.57 Aligned_cols=50 Identities=20% Similarity=0.440 Sum_probs=32.2
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCccc
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQ 73 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~ 73 (386)
+..++..|.||...-....-+..-.|...||..|+.+-+.. .-.||.|..
T Consensus 12 ~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 12 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred hccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 45567789999875311223444478999999998744322 235888843
No 99
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=57.12 E-value=1.8 Score=34.37 Aligned_cols=54 Identities=22% Similarity=0.295 Sum_probs=33.8
Q ss_pred ccCCCccccccccccC--CCCceeccCCccccHHHHHHHHh--cCCCCCCccccCCCC
Q 016591 25 DACDDACSICLEDFSE--SDPSTLTSCKHEFHLQCILEWCQ--RSSQCPMCWQPISLK 78 (386)
Q Consensus 25 d~ed~~C~ICle~f~~--~~pv~ll~CgH~FC~~CI~~Wlq--~s~~CPlCR~~i~~k 78 (386)
.+.+..|.||...-.. ++-+..-.|.-.||..|+..-.. ..-.||.|......+
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~~~ 79 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARP 79 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTTSC
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccchh
Confidence 3567889999864211 12233446888999999975332 234699996654433
No 100
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=56.53 E-value=2.2 Score=38.33 Aligned_cols=44 Identities=27% Similarity=0.609 Sum_probs=31.6
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCcccc
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQP 74 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~~ 74 (386)
++.|.+|... ++-+....|...||..|+.+-+.. .-.||.|+..
T Consensus 2 ~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCC---SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCC---CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 5679999864 344555578899999999754432 3369999754
No 101
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=56.28 E-value=3.7 Score=30.56 Aligned_cols=43 Identities=19% Similarity=0.483 Sum_probs=28.8
Q ss_pred CccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCc
Q 016591 29 DACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMC 71 (386)
Q Consensus 29 ~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlC 71 (386)
..|-.|+..|..........|++.||.+|=.-.-+.-..||-|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 4599999988322113456799999999953322344679988
No 102
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=55.41 E-value=9.1 Score=32.65 Aligned_cols=46 Identities=26% Similarity=0.572 Sum_probs=31.4
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHH------h-----cCCCCCCccc
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWC------Q-----RSSQCPMCWQ 73 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wl------q-----~s~~CPlCR~ 73 (386)
|..++.|.||.+- ++-+-.-.|-..||..||.+-+ . ..-.|++|.-
T Consensus 54 Dg~~~~C~vC~dG---G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 54 DGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp TSCBSSCTTTCCC---SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCCcCeecCCC---CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 4567779999864 2333334688999999999752 1 2247999943
No 103
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=54.08 E-value=16 Score=29.79 Aligned_cols=45 Identities=22% Similarity=0.366 Sum_probs=28.4
Q ss_pred CCccccccccc------cCCCCceeccCCccccHHHHHH------HH-hcCCCCCCcc
Q 016591 28 DDACSICLEDF------SESDPSTLTSCKHEFHLQCILE------WC-QRSSQCPMCW 72 (386)
Q Consensus 28 d~~C~ICle~f------~~~~pv~ll~CgH~FC~~CI~~------Wl-q~s~~CPlCR 72 (386)
...|.||+..- ..++-+....|+..||..||.. .+ ...-.||.|+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 45699998752 1123355667999999999952 11 2344577774
No 104
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=53.56 E-value=2.5 Score=32.59 Aligned_cols=53 Identities=17% Similarity=0.338 Sum_probs=33.1
Q ss_pred CCCccCCCccccccccccCCCCceec--cCCccccHHHHHHHHh---------cCCCCCCccccC
Q 016591 22 GIQDACDDACSICLEDFSESDPSTLT--SCKHEFHLQCILEWCQ---------RSSQCPMCWQPI 75 (386)
Q Consensus 22 ~iqd~ed~~C~ICle~f~~~~pv~ll--~CgH~FC~~CI~~Wlq---------~s~~CPlCR~~i 75 (386)
.++..+...| ||......+.-+..- .|..-||..|+.---. ....||.|+..-
T Consensus 10 ~~~~~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 10 PFQPEIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp SSSCCCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred ccCCCCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 3444566778 898874223223333 6888999999853211 356799996543
No 105
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=51.37 E-value=7.5 Score=29.55 Aligned_cols=51 Identities=20% Similarity=0.386 Sum_probs=29.9
Q ss_pred CCccCCCccccccccccCCCCceecc--CC-ccccHHHHHHHH--hcCCCCCCccccC
Q 016591 23 IQDACDDACSICLEDFSESDPSTLTS--CK-HEFHLQCILEWC--QRSSQCPMCWQPI 75 (386)
Q Consensus 23 iqd~ed~~C~ICle~f~~~~pv~ll~--Cg-H~FC~~CI~~Wl--q~s~~CPlCR~~i 75 (386)
++..++..| ||..... +.-+..-. |. .-||..|+.--. .....||.|+..-
T Consensus 11 ~d~~~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 11 VDPNEPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp CCTTSCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCS
T ss_pred cCCCCCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCccc
Confidence 344566778 8988641 22122223 55 579999987211 1345799997643
No 106
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=50.90 E-value=2.3 Score=37.19 Aligned_cols=50 Identities=22% Similarity=0.397 Sum_probs=30.8
Q ss_pred CCccCCCccccccccccCCC-CceeccCCccccHHHHHHHH-----hcCCCCCCccc
Q 016591 23 IQDACDDACSICLEDFSESD-PSTLTSCKHEFHLQCILEWC-----QRSSQCPMCWQ 73 (386)
Q Consensus 23 iqd~ed~~C~ICle~f~~~~-pv~ll~CgH~FC~~CI~~Wl-----q~s~~CPlCR~ 73 (386)
..+.+...| ||........ -+..-.|..-||..|+.--. .....||.|+.
T Consensus 3 ~~~~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 3 LGSDTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp ----CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCCCCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 345567789 9988752222 24444688999999985211 23568999965
No 107
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=50.86 E-value=10 Score=29.03 Aligned_cols=50 Identities=18% Similarity=0.331 Sum_probs=31.8
Q ss_pred ccCCCccccccccccCCC-CceeccCCccccHHHHHHHH-----hcCCCCCCccccC
Q 016591 25 DACDDACSICLEDFSESD-PSTLTSCKHEFHLQCILEWC-----QRSSQCPMCWQPI 75 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~-pv~ll~CgH~FC~~CI~~Wl-----q~s~~CPlCR~~i 75 (386)
+.+...| ||........ -+..-.|..=||..|+.--. .....||.|+...
T Consensus 9 ~~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 9 ALVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred cCCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 3445566 9988763222 23444688899999985221 1357899997654
No 108
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=49.82 E-value=4.7 Score=29.66 Aligned_cols=51 Identities=22% Similarity=0.527 Sum_probs=33.1
Q ss_pred ccCCCccccccccccC--CCCceeccCCccccHHHHHHHH-------hcCCCCCCccccC
Q 016591 25 DACDDACSICLEDFSE--SDPSTLTSCKHEFHLQCILEWC-------QRSSQCPMCWQPI 75 (386)
Q Consensus 25 d~ed~~C~ICle~f~~--~~pv~ll~CgH~FC~~CI~~Wl-------q~s~~CPlCR~~i 75 (386)
+..+..|.||...... +..+..-.|...||..|+..-+ ...-.||.|....
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 4567889999976421 2223444788999999987533 1234688886543
No 109
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=49.29 E-value=3.7 Score=36.93 Aligned_cols=48 Identities=17% Similarity=0.352 Sum_probs=32.8
Q ss_pred CccccccccccCCCC----ceeccCCccccHHHHHHH------Hh-----cCCCCCCccccCC
Q 016591 29 DACSICLEDFSESDP----STLTSCKHEFHLQCILEW------CQ-----RSSQCPMCWQPIS 76 (386)
Q Consensus 29 ~~C~ICle~f~~~~p----v~ll~CgH~FC~~CI~~W------lq-----~s~~CPlCR~~i~ 76 (386)
..|+||...+...+. +..-.|..-||..|+.-- +. ....||.|+..-.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 459999998855431 344468999999997521 11 2678999987543
No 110
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=48.77 E-value=8.6 Score=32.29 Aligned_cols=37 Identities=22% Similarity=0.424 Sum_probs=26.1
Q ss_pred CCccCCCccccccccccCC-CCceeccCCccccHHHHH
Q 016591 23 IQDACDDACSICLEDFSES-DPSTLTSCKHEFHLQCIL 59 (386)
Q Consensus 23 iqd~ed~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~ 59 (386)
+.|.+-..|.+|...|... .....-.||+.||..|..
T Consensus 64 ~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~ 101 (125)
T 1joc_A 64 AEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSA 101 (125)
T ss_dssp CCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred ccCCCCCCCcCcCCccccccccccCCCCCeEEChHHhC
Confidence 3455556799999998432 224555799999999954
No 111
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=48.43 E-value=9.7 Score=29.59 Aligned_cols=38 Identities=18% Similarity=0.270 Sum_probs=27.0
Q ss_pred CCccCCCccccccccccCC-CCceeccCCccccHHHHHH
Q 016591 23 IQDACDDACSICLEDFSES-DPSTLTSCKHEFHLQCILE 60 (386)
Q Consensus 23 iqd~ed~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~~ 60 (386)
+.|.+-..|.+|...|... .....-.||+.||..|...
T Consensus 16 ~pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 16 QEDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp CCTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCC
T ss_pred ccCCCCCCCcCcCCccccchhcccccCCCcEEChHHhCC
Confidence 3555667899999998432 2234557999999999654
No 112
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=47.45 E-value=9.7 Score=30.08 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=27.2
Q ss_pred CCccCCCccccccccccCC-CCceeccCCccccHHHHHHH
Q 016591 23 IQDACDDACSICLEDFSES-DPSTLTSCKHEFHLQCILEW 61 (386)
Q Consensus 23 iqd~ed~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~~W 61 (386)
+.|.+-..|.+|...|... .......||+.||..|...+
T Consensus 15 ~~d~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~ 54 (90)
T 3t7l_A 15 VPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRK 54 (90)
T ss_dssp CCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred cccccCCcCcCCCCcccchhhCccccCCCCEECCcccCCe
Confidence 3445566799999988432 23455579999999996543
No 113
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.62 E-value=10 Score=29.42 Aligned_cols=35 Identities=20% Similarity=0.432 Sum_probs=24.8
Q ss_pred CccCCCccccccccccCC-CCceeccCCccccHHHH
Q 016591 24 QDACDDACSICLEDFSES-DPSTLTSCKHEFHLQCI 58 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI 58 (386)
.|.+-..|.+|...|..- .....-.||.+||..|.
T Consensus 10 pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs 45 (84)
T 1x4u_A 10 PTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCC 45 (84)
T ss_dssp SCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTS
T ss_pred cCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhc
Confidence 455556799999998432 22344579999999884
No 114
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=45.92 E-value=8.3 Score=27.96 Aligned_cols=46 Identities=24% Similarity=0.548 Sum_probs=32.1
Q ss_pred ccCCCccccccccccCCCCceeccCCccccHHHHHHHHhc----CCCCCCccc
Q 016591 25 DACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQ 73 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~ 73 (386)
|..+..|.||... ++-+..-.|...||..|+.+-+.. .-.||.|..
T Consensus 2 d~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 2 MIHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp CCCCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCCCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 3457889999874 345555579999999999754432 235888854
No 115
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=45.49 E-value=11 Score=29.24 Aligned_cols=37 Identities=27% Similarity=0.498 Sum_probs=26.0
Q ss_pred CccCCCccccccccccCC-CCceeccCCccccHHHHHH
Q 016591 24 QDACDDACSICLEDFSES-DPSTLTSCKHEFHLQCILE 60 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~~ 60 (386)
.|.+-..|.+|...|... .....-.||..||..|...
T Consensus 15 ~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 15 KDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCE
T ss_pred cCccCCcccCcCCcccCccccccCCCCCCEEChHHhCC
Confidence 455556799999998432 2234557999999999643
No 116
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=45.47 E-value=4.4 Score=39.88 Aligned_cols=52 Identities=17% Similarity=0.275 Sum_probs=0.0
Q ss_pred CccCCCccccccccccCC-CCceeccCCccccHHHHHHHHh-------cCCCCCCccccC
Q 016591 24 QDACDDACSICLEDFSES-DPSTLTSCKHEFHLQCILEWCQ-------RSSQCPMCWQPI 75 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~~Wlq-------~s~~CPlCR~~i 75 (386)
.+.....|.+|...|... ....+..||+.||..|...+.. ....|-.|...+
T Consensus 371 ~~~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l 430 (434)
T 3mpx_A 371 PVTHVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGEL 430 (434)
T ss_dssp ------------------------------------------------------------
T ss_pred CcccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHH
Confidence 444567799999988422 1234557999999999876541 124577775544
No 117
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=45.40 E-value=7.1 Score=33.38 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=23.3
Q ss_pred cCCCccccccccccC--CCCceeccCCccccHHHH
Q 016591 26 ACDDACSICLEDFSE--SDPSTLTSCKHEFHLQCI 58 (386)
Q Consensus 26 ~ed~~C~ICle~f~~--~~pv~ll~CgH~FC~~CI 58 (386)
..+..|.||...|.. ........|.|.+|..|-
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~ 87 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 87 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccC
Confidence 357889999999831 122455578888888774
No 118
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=43.64 E-value=1.3 Score=35.17 Aligned_cols=50 Identities=16% Similarity=0.346 Sum_probs=32.5
Q ss_pred cCCCccccccccccC--CCCceeccCCccccHHHHHHHHh--------cCCCCCCccccC
Q 016591 26 ACDDACSICLEDFSE--SDPSTLTSCKHEFHLQCILEWCQ--------RSSQCPMCWQPI 75 (386)
Q Consensus 26 ~ed~~C~ICle~f~~--~~pv~ll~CgH~FC~~CI~~Wlq--------~s~~CPlCR~~i 75 (386)
+.+..|.||...-.. +.-+..-.|...||..|+..-+. ..-.|+.|....
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 356789999875311 12234446899999999986543 234699886544
No 119
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=41.49 E-value=11 Score=32.92 Aligned_cols=32 Identities=16% Similarity=0.407 Sum_probs=24.5
Q ss_pred CCCcccccccccc--CCCCceeccCCccccHHHH
Q 016591 27 CDDACSICLEDFS--ESDPSTLTSCKHEFHLQCI 58 (386)
Q Consensus 27 ed~~C~ICle~f~--~~~pv~ll~CgH~FC~~CI 58 (386)
.+..|.+|...|. .........|.|.+|..|-
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~ 100 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS 100 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc
Confidence 4788999999863 2334566689999999996
No 120
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=38.34 E-value=19 Score=35.98 Aligned_cols=46 Identities=20% Similarity=0.492 Sum_probs=32.4
Q ss_pred ccCCCccccccccccCCCCceec--cCCccccHHHHHHHHhc----------CCCCCCccc
Q 016591 25 DACDDACSICLEDFSESDPSTLT--SCKHEFHLQCILEWCQR----------SSQCPMCWQ 73 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll--~CgH~FC~~CI~~Wlq~----------s~~CPlCR~ 73 (386)
|..+..|-||-+- ++-+..- .|...||..||..++.. .-.|=+|.-
T Consensus 90 DG~~~yCr~C~~G---g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 90 DGYQSYCSICCSG---ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp SSSBCSCTTTCCC---SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred CCCcccceEcCCC---CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 4567789999764 2444444 78899999999998832 236888853
No 121
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=37.64 E-value=3.2 Score=30.68 Aligned_cols=35 Identities=23% Similarity=0.583 Sum_probs=24.1
Q ss_pred CccccccccccCC---CCceecc--CCccccHHHHHHHHh
Q 016591 29 DACSICLEDFSES---DPSTLTS--CKHEFHLQCILEWCQ 63 (386)
Q Consensus 29 ~~C~ICle~f~~~---~pv~ll~--CgH~FC~~CI~~Wlq 63 (386)
..||-|.-.+... +.++... |++.||..|...|..
T Consensus 7 k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~~~ 46 (60)
T 1wd2_A 7 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEP 46 (60)
T ss_dssp CCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGG
T ss_pred eECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCccc
Confidence 4588888776322 2244434 899999999888865
No 122
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=37.56 E-value=6.8 Score=36.50 Aligned_cols=45 Identities=22% Similarity=0.479 Sum_probs=26.0
Q ss_pred CccccccccccCCCCceeccCCccccHHHHHHHHhc-----CCCCCCccc
Q 016591 29 DACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-----SSQCPMCWQ 73 (386)
Q Consensus 29 ~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-----s~~CPlCR~ 73 (386)
..|.||...-..+.-+..-.|...||..|+.+-+.. .-.||.|..
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 357888753211233445579999999999865432 236999964
No 123
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=37.55 E-value=22 Score=26.90 Aligned_cols=50 Identities=22% Similarity=0.313 Sum_probs=31.1
Q ss_pred CccCCCccccccccc--cCCCCceeccCCccccHHHHHHHHh--cCCCCCCccc
Q 016591 24 QDACDDACSICLEDF--SESDPSTLTSCKHEFHLQCILEWCQ--RSSQCPMCWQ 73 (386)
Q Consensus 24 qd~ed~~C~ICle~f--~~~~pv~ll~CgH~FC~~CI~~Wlq--~s~~CPlCR~ 73 (386)
....+..|.||...- ..++-+..-.|.-.||..|+..-.. ..-.||.|..
T Consensus 12 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 345678899998652 1112234447889999999874321 2335777743
No 124
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=36.91 E-value=4.6 Score=30.47 Aligned_cols=49 Identities=18% Similarity=0.340 Sum_probs=29.9
Q ss_pred CccCCCccccccccccCCCCceeccCCccccHHHHHHHH---hcCCCCCCccc
Q 016591 24 QDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWC---QRSSQCPMCWQ 73 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wl---q~s~~CPlCR~ 73 (386)
++.+...| ||........-+..-.|..-||..|+.--. .....||.|+.
T Consensus 15 ~~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 15 YFQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TTTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCCCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 45566778 998875211123344688888999975322 13457888853
No 125
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.45 E-value=7 Score=30.23 Aligned_cols=45 Identities=18% Similarity=0.452 Sum_probs=28.1
Q ss_pred CccccccccccCCCCceeccCCccccHHHHHHHHhc-----CCCCCCccc
Q 016591 29 DACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-----SSQCPMCWQ 73 (386)
Q Consensus 29 ~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-----s~~CPlCR~ 73 (386)
..|.||...-..++-+..-.|...||..|+.+-+.. .-.||.|..
T Consensus 27 c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 367888753211233344478899999999854432 236888854
No 126
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=36.22 E-value=4.5 Score=30.67 Aligned_cols=43 Identities=21% Similarity=0.507 Sum_probs=25.1
Q ss_pred cccccccccCCCCceeccCCccccHHHHHHHHhc-----CCCCCCccc
Q 016591 31 CSICLEDFSESDPSTLTSCKHEFHLQCILEWCQR-----SSQCPMCWQ 73 (386)
Q Consensus 31 C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~-----s~~CPlCR~ 73 (386)
|.||...-..+.-+..-.|...||..|+.+-+.. .-.||.|..
T Consensus 21 C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 21 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp BTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 4566642111122333368899999999854432 336999864
No 127
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=35.92 E-value=9.6 Score=31.12 Aligned_cols=44 Identities=25% Similarity=0.511 Sum_probs=27.6
Q ss_pred cccccccccc-CCCCceeccCCccccHHHHHHHHhc----CCCCCCccc
Q 016591 30 ACSICLEDFS-ESDPSTLTSCKHEFHLQCILEWCQR----SSQCPMCWQ 73 (386)
Q Consensus 30 ~C~ICle~f~-~~~pv~ll~CgH~FC~~CI~~Wlq~----s~~CPlCR~ 73 (386)
.|.||...-. .++-+..-.|...||..|+.+-+.. .-.||.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 4677775321 1223344468999999999765532 236999964
No 128
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=35.21 E-value=14 Score=33.57 Aligned_cols=33 Identities=21% Similarity=0.480 Sum_probs=24.0
Q ss_pred CCccccccccccCC-CCceeccCCccccHHHHHH
Q 016591 28 DDACSICLEDFSES-DPSTLTSCKHEFHLQCILE 60 (386)
Q Consensus 28 d~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~~ 60 (386)
+..|.+|...|... .....-.||+.||..|...
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~ 194 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 194 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHHhCC
Confidence 56899999988432 2345557999999999543
No 129
>3lt7_A Adhesin YADA; adhesion, coiled coil, trimeric autotransporter, cell adhesi membrane, cell outer membrane, membrane, plasmid, virulence; 1.50A {Yersinia enterocolitica} PDB: 3lt6_A* 3h7z_A 3h7x_A
Probab=34.50 E-value=12 Score=28.28 Aligned_cols=16 Identities=0% Similarity=0.173 Sum_probs=8.1
Q ss_pred HHHHHhhhhHHHHHHH
Q 016591 313 EVRREVNAGISTVSRM 328 (386)
Q Consensus 313 ~~~re~~agia~v~rm 328 (386)
.+++..|||||+|.-|
T Consensus 45 k~~kr~~aGiA~a~A~ 60 (64)
T 3lt7_A 45 KLEKRLLKLLASSAAL 60 (64)
T ss_dssp HHHHHHHHHC------
T ss_pred HHHHHHhhhHHHHHHH
Confidence 4567899999999765
No 130
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=34.19 E-value=19 Score=31.73 Aligned_cols=37 Identities=19% Similarity=0.442 Sum_probs=25.5
Q ss_pred CccCCCccccccccccCCCCceec--cCCccccHHHHHHHHh
Q 016591 24 QDACDDACSICLEDFSESDPSTLT--SCKHEFHLQCILEWCQ 63 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll--~CgH~FC~~CI~~Wlq 63 (386)
+|..+..|.||-+- ++.+..- .|...||..||..++.
T Consensus 75 eDG~~~yC~wC~~G---g~l~~Cdn~~C~r~FC~~CI~~nvG 113 (159)
T 3a1b_A 75 DDGYQSYCTICCGG---REVLMCGNNNCCRCFCVECVDLLVG 113 (159)
T ss_dssp TTSSBSSCTTTSCC---SEEEECSSTTTCCEEEHHHHHHHTC
T ss_pred CCCCcceeeEecCC---CeEEeeCCCCCCCchhHHHHHHhcC
Confidence 34567789999764 2222222 4889999999998874
No 131
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=33.81 E-value=16 Score=33.47 Aligned_cols=33 Identities=18% Similarity=0.427 Sum_probs=24.3
Q ss_pred CCccccccccccCC-CCceeccCCccccHHHHHH
Q 016591 28 DDACSICLEDFSES-DPSTLTSCKHEFHLQCILE 60 (386)
Q Consensus 28 d~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~~ 60 (386)
+..|.+|...|... .....-.||+.||..|...
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~ 197 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSK 197 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCE
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhhcCC
Confidence 45899999988433 2345557999999999654
No 132
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=33.79 E-value=5.3 Score=31.18 Aligned_cols=32 Identities=25% Similarity=0.617 Sum_probs=19.8
Q ss_pred cccccccccCC---CCceeccCCccccHHHHHHHH
Q 016591 31 CSICLEDFSES---DPSTLTSCKHEFHLQCILEWC 62 (386)
Q Consensus 31 C~ICle~f~~~---~pv~ll~CgH~FC~~CI~~Wl 62 (386)
||-|-..+... ..+....|++.||..|-..|-
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w~ 62 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWE 62 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCC
T ss_pred CcCCCchheecCCCCceEeCCCCCccccccCCchh
Confidence 77666544211 123443599999988877773
No 133
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=33.70 E-value=3.4 Score=34.82 Aligned_cols=52 Identities=19% Similarity=0.469 Sum_probs=30.9
Q ss_pred CccCCCccccccccccCC-CCceeccCCccccHHHHHHHHhcCCCCCCccccC
Q 016591 24 QDACDDACSICLEDFSES-DPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPI 75 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i 75 (386)
.+.....|.+|...|... .....-.||..||..|..........|-.|...+
T Consensus 15 Pd~~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~~~ 67 (120)
T 1y02_A 15 PTGLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQRFR 67 (120)
T ss_dssp -----CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHHHH
T ss_pred CccccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHHHH
Confidence 455567899999988322 2234557999999999766554456677775543
No 134
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=33.24 E-value=31 Score=25.66 Aligned_cols=34 Identities=24% Similarity=0.467 Sum_probs=22.7
Q ss_pred cCCCccccccccccCCCC-ceec-cCCccccHHHHH
Q 016591 26 ACDDACSICLEDFSESDP-STLT-SCKHEFHLQCIL 59 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~p-v~ll-~CgH~FC~~CI~ 59 (386)
+....|.+|...+.+... +..- .|..-||..|+.
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 446679999998744333 3344 688899999975
No 135
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=31.76 E-value=17 Score=29.82 Aligned_cols=50 Identities=18% Similarity=0.395 Sum_probs=31.4
Q ss_pred CCccCCCccccccccccCCCCceec--cCCccccHHHHHHHHhc----CCCCCCccccCCC
Q 016591 23 IQDACDDACSICLEDFSESDPSTLT--SCKHEFHLQCILEWCQR----SSQCPMCWQPISL 77 (386)
Q Consensus 23 iqd~ed~~C~ICle~f~~~~pv~ll--~CgH~FC~~CI~~Wlq~----s~~CPlCR~~i~~ 77 (386)
.++..++.|.||.+. ++-+..- .|...||..|+. +.. .-.||.|.-.+..
T Consensus 10 ~~~~~~~~C~~C~~~---G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C~ 65 (107)
T 4gne_A 10 PKQMHEDYCFQCGDG---GELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECS 65 (107)
T ss_dssp CCCSSCSSCTTTCCC---SEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTTC
T ss_pred CcCCCCCCCCcCCCC---CcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcCC
Confidence 355678889999843 3323332 477899999987 432 2358877654443
No 136
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=31.37 E-value=21 Score=29.14 Aligned_cols=33 Identities=18% Similarity=0.406 Sum_probs=22.6
Q ss_pred Ccccccccccc----C---CCCceeccCCccccHHHHHHH
Q 016591 29 DACSICLEDFS----E---SDPSTLTSCKHEFHLQCILEW 61 (386)
Q Consensus 29 ~~C~ICle~f~----~---~~pv~ll~CgH~FC~~CI~~W 61 (386)
..|.||+..-. . ++-+....|+..||..|+..+
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~ 41 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFT 41 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCCh
Confidence 46999987531 1 133555579999999998743
No 137
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=30.64 E-value=5.9 Score=30.71 Aligned_cols=26 Identities=27% Similarity=0.660 Sum_probs=18.8
Q ss_pred cCCccccHHHHHHHHhc----C-CCCCCccc
Q 016591 48 SCKHEFHLQCILEWCQR----S-SQCPMCWQ 73 (386)
Q Consensus 48 ~CgH~FC~~CI~~Wlq~----s-~~CPlCR~ 73 (386)
.|...||..|+.+-+.. . -.||.|+.
T Consensus 46 ~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 46 ECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 68889999999865532 2 36998864
No 138
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=30.41 E-value=23 Score=27.83 Aligned_cols=34 Identities=18% Similarity=0.355 Sum_probs=23.9
Q ss_pred CCCccccccccccCCC-CceeccCCccccHHHHHH
Q 016591 27 CDDACSICLEDFSESD-PSTLTSCKHEFHLQCILE 60 (386)
Q Consensus 27 ed~~C~ICle~f~~~~-pv~ll~CgH~FC~~CI~~ 60 (386)
+...|.+|...|.... ....-.||..||..|...
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 42 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCE
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhHcCC
Confidence 3557999999984322 234457999999999643
No 139
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=30.23 E-value=26 Score=26.32 Aligned_cols=32 Identities=31% Similarity=0.458 Sum_probs=22.9
Q ss_pred CCccccccccccCC-CCceeccCCccccHHHHH
Q 016591 28 DDACSICLEDFSES-DPSTLTSCKHEFHLQCIL 59 (386)
Q Consensus 28 d~~C~ICle~f~~~-~pv~ll~CgH~FC~~CI~ 59 (386)
+..|.+|...|... .....-.||..||..|..
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred CCcccCCCCccCCccccccCCCCCEEEcccccC
Confidence 35799999988432 223445799999999954
No 140
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=29.14 E-value=15 Score=30.34 Aligned_cols=30 Identities=23% Similarity=0.436 Sum_probs=19.5
Q ss_pred CceeccCCccccHHHHHHHHhcCCCCCCccccCCC
Q 016591 43 PSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 43 pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
+..+..||+.|+ .-+.....||.|+...-.
T Consensus 67 p~~C~~CG~~F~-----~~~~kPsrCP~CkSe~Ie 96 (105)
T 2gmg_A 67 PAQCRKCGFVFK-----AEINIPSRCPKCKSEWIE 96 (105)
T ss_dssp CCBBTTTCCBCC-----CCSSCCSSCSSSCCCCBC
T ss_pred CcChhhCcCeec-----ccCCCCCCCcCCCCCccC
Confidence 456668999981 112234679999876654
No 141
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=27.01 E-value=35 Score=27.65 Aligned_cols=50 Identities=14% Similarity=0.014 Sum_probs=32.2
Q ss_pred CccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 29 DACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 29 ~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
+.|..|...|.+........=+..||..|....+..+..|-.|.+.|...
T Consensus 33 F~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~~ 82 (122)
T 1m3v_A 33 LKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSGG 82 (122)
T ss_dssp HCCSSSCCCTTTSEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSCCE
T ss_pred CCcCCCCCcccccCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcCch
Confidence 46778877773100112234567789999877665545799998888754
No 142
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=26.38 E-value=24 Score=28.96 Aligned_cols=12 Identities=25% Similarity=0.880 Sum_probs=10.9
Q ss_pred cccHHHHHHHHh
Q 016591 52 EFHLQCILEWCQ 63 (386)
Q Consensus 52 ~FC~~CI~~Wlq 63 (386)
.||.-|+..|+.
T Consensus 42 GFCRNCLskWy~ 53 (105)
T 2o35_A 42 GFCRNCLSNWYR 53 (105)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999995
No 143
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=26.02 E-value=25 Score=28.84 Aligned_cols=12 Identities=25% Similarity=0.913 Sum_probs=10.9
Q ss_pred cccHHHHHHHHh
Q 016591 52 EFHLQCILEWCQ 63 (386)
Q Consensus 52 ~FC~~CI~~Wlq 63 (386)
.||.-||..|+.
T Consensus 41 GFCRNCLskWy~ 52 (104)
T 3fyb_A 41 DFCRNCLAKWLM 52 (104)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999995
No 144
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=25.94 E-value=21 Score=25.12 Aligned_cols=43 Identities=19% Similarity=0.301 Sum_probs=26.6
Q ss_pred ccccccccccCCCC-ceec-cCCccccHHHHHHHH----hcCCCCCCcc
Q 016591 30 ACSICLEDFSESDP-STLT-SCKHEFHLQCILEWC----QRSSQCPMCW 72 (386)
Q Consensus 30 ~C~ICle~f~~~~p-v~ll-~CgH~FC~~CI~~Wl----q~s~~CPlCR 72 (386)
.|.||...+.++.. +..- .|..=||..|+.--. .....||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 47889887733322 2333 477788999975221 2567899885
No 145
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=24.74 E-value=5.8 Score=30.68 Aligned_cols=16 Identities=19% Similarity=0.563 Sum_probs=13.5
Q ss_pred cCCccccHHHHHHHHh
Q 016591 48 SCKHEFHLQCILEWCQ 63 (386)
Q Consensus 48 ~CgH~FC~~CI~~Wlq 63 (386)
.|++.||..|...|=.
T Consensus 55 ~C~~~FC~~C~~~wH~ 70 (80)
T 2jmo_A 55 GCGFAFCRECKEAYHE 70 (80)
T ss_dssp CCSCCEETTTTEECCS
T ss_pred CCCCeeccccCccccC
Confidence 6999999999888743
No 146
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.35 E-value=44 Score=24.41 Aligned_cols=41 Identities=17% Similarity=0.471 Sum_probs=28.6
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
...|..|-..+...+. +..-+..||..| +.|-.|...|...
T Consensus 9 ~~~C~~C~~~I~~~~~--v~a~~~~~H~~C--------F~C~~C~~~L~~~ 49 (76)
T 2cu8_A 9 ASKCPKCDKTVYFAEK--VSSLGKDWHKFC--------LKCERCSKTLTPG 49 (76)
T ss_dssp CCBCTTTCCBCCTTTE--EEETTEEEETTT--------CBCSSSCCBCCTT
T ss_pred CCCCcCCCCEeECCeE--EEECCeEeeCCC--------CCCCCCCCccCCC
Confidence 4569999998843332 334577888888 5688998887643
No 147
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=24.05 E-value=6.6 Score=38.12 Aligned_cols=48 Identities=17% Similarity=0.259 Sum_probs=31.7
Q ss_pred cCCCccccccccccCCCCce----eccCCccccHHHHHHHHhcCCCCCCcccc
Q 016591 26 ACDDACSICLEDFSESDPST----LTSCKHEFHLQCILEWCQRSSQCPMCWQP 74 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~----ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~ 74 (386)
+....||||-..-... .+. ...=.+.+|..|-.+|-.....||.|-..
T Consensus 180 ~~~~~CPvCGs~P~~s-~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAG-MIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES 231 (309)
T ss_dssp TTCSSCTTTCCCEEEE-EEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC
T ss_pred ccCCCCCCCCCcCcee-EEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCC
Confidence 5678899997653111 000 01123678888999998888899999664
No 148
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=23.65 E-value=50 Score=26.66 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=32.8
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCC
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
=+.|..|...|..........=+..||..|....+.....|..|.+.|..
T Consensus 29 CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 29 CLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRA 78 (131)
T ss_dssp TCBCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHCCCEECTTTCCEECT
T ss_pred HcccCcCCCccccCCCeEEEECCEEeecCchhhhCCCccChhhcCCccCc
Confidence 36688888777321122233456789999987765444479999988864
No 149
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=23.61 E-value=9.2 Score=27.96 Aligned_cols=47 Identities=21% Similarity=0.412 Sum_probs=26.1
Q ss_pred ccCCCccccccccccCCCCceecc--CC-ccccHHHHHHHH--hcCCCCCCccc
Q 016591 25 DACDDACSICLEDFSESDPSTLTS--CK-HEFHLQCILEWC--QRSSQCPMCWQ 73 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~pv~ll~--Cg-H~FC~~CI~~Wl--q~s~~CPlCR~ 73 (386)
..++..| ||.... .+.-+..-. |. .-||..|+.--. .....||.|+.
T Consensus 6 ~~e~~yC-~C~~~~-~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 6 SNEPTYC-LCHQVS-YGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp --CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCCcEE-ECCCCC-CCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccC
Confidence 3455667 998864 122222224 65 589999987111 12456888854
No 150
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=23.46 E-value=8.8 Score=28.07 Aligned_cols=46 Identities=22% Similarity=0.444 Sum_probs=25.3
Q ss_pred CccCCCccccccccccCCCCceecc--CC-ccccHHHHHHHHh----cCCCCCCccc
Q 016591 24 QDACDDACSICLEDFSESDPSTLTS--CK-HEFHLQCILEWCQ----RSSQCPMCWQ 73 (386)
Q Consensus 24 qd~ed~~C~ICle~f~~~~pv~ll~--Cg-H~FC~~CI~~Wlq----~s~~CPlCR~ 73 (386)
+..+...| ||.... .+.-+..-. |. .-||..|+. +. ....||.|..
T Consensus 6 d~~e~~~C-~C~~~~-~g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 6 DPNEPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp ---CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCCCCEE-ECCCcC-CCCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 34456667 998753 122122223 44 579999987 32 3456888853
No 151
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=23.17 E-value=6.8 Score=29.52 Aligned_cols=49 Identities=18% Similarity=0.260 Sum_probs=30.2
Q ss_pred ccCCCccccccccccCCC-CceeccCCccccHHHHHHHH----hcCCCCCCcccc
Q 016591 25 DACDDACSICLEDFSESD-PSTLTSCKHEFHLQCILEWC----QRSSQCPMCWQP 74 (386)
Q Consensus 25 d~ed~~C~ICle~f~~~~-pv~ll~CgH~FC~~CI~~Wl----q~s~~CPlCR~~ 74 (386)
+.+...| ||.....++. -+..-.|..=||..|+.--. .....||.|+..
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred CCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 4455668 7987652232 23444688889999975432 234679988653
No 152
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=23.13 E-value=5.6 Score=29.74 Aligned_cols=47 Identities=21% Similarity=0.420 Sum_probs=25.8
Q ss_pred cCCCccccccccccCCCCceec--cCCccccHHHHHHHH---h-----cCCCCCCccc
Q 016591 26 ACDDACSICLEDFSESDPSTLT--SCKHEFHLQCILEWC---Q-----RSSQCPMCWQ 73 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll--~CgH~FC~~CI~~Wl---q-----~s~~CPlCR~ 73 (386)
++...| ||......+.-+..- .|..=||..|+---- . ....||.||.
T Consensus 8 e~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 8 EAKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp SCEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 345567 896654222212221 277789999973210 0 1467999964
No 153
>2ve8_A FTSK, DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA-binding, winged helix, bacterial cell division; HET: DNA; 1.4A {Pseudomonas aeruginosa} SCOP: a.4.5.67 PDB: 2ve9_A* 2j5o_A*
Probab=22.79 E-value=52 Score=25.34 Aligned_cols=28 Identities=25% Similarity=0.477 Sum_probs=23.8
Q ss_pred HHHHHHhhhhHHHHHHHHHhhhccCCCC
Q 016591 312 TEVRREVNAGISTVSRMMERLETRDSNS 339 (386)
Q Consensus 312 ~~~~re~~agia~v~rm~e~l~~~~~~~ 339 (386)
+-+||-+.-|-.--+|+||.||...--+
T Consensus 28 S~lQR~lrIGYnRAArlid~lE~~GiVg 55 (73)
T 2ve8_A 28 SAVQRKLKIGYNRAARMIEAMEMAGVVT 55 (73)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHTTSBC
T ss_pred HHHHHHHccChHHHHHHHHHHHHCCcCC
Confidence 5679999999999999999999765433
No 154
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=22.53 E-value=72 Score=24.10 Aligned_cols=42 Identities=17% Similarity=0.294 Sum_probs=29.7
Q ss_pred cCCCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 26 ACDDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 26 ~ed~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
.....|..|.+.+.. . .+..-+..||..| +.|-.|...|...
T Consensus 23 ~~~~~C~~C~~~I~~--~-~~~a~~~~~H~~C--------F~C~~C~~~L~~~ 64 (89)
T 1x64_A 23 QRMPLCDKCGSGIVG--A-VVKARDKYRHPEC--------FVCADCNLNLKQK 64 (89)
T ss_dssp CSCCBCTTTCCBCCS--C-CEESSSCEECTTT--------CCCSSSCCCTTTS
T ss_pred CcCCCcccCCCEecc--c-EEEECCceECccC--------CEecCCCCCCCCC
Confidence 345679999998743 2 2334678889888 5688998887643
No 155
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=21.80 E-value=56 Score=29.16 Aligned_cols=54 Identities=9% Similarity=0.143 Sum_probs=35.1
Q ss_pred HhhhhhhhhhhhhhcccccccchhhhhcccCCccccccHHHHHHhhhhHHHHHHHHHhhhc
Q 016591 274 LKSRFNAVSMRYKESISKSTRGWKERFFSRNNTMADLGTEVRREVNAGISTVSRMMERLET 334 (386)
Q Consensus 274 ~~s~~~~~s~~yk~si~k~~~g~ke~~~~r~~~~~~~~~~~~re~~agia~v~rm~e~l~~ 334 (386)
|++=+++++.+--- -.+|+||++-..+.+-=+.-+.|++.|..-+-+|++.|+.
T Consensus 17 Lq~~i~~l~~~~~~-------~~~e~l~~~q~~lq~sl~~~~~~l~~g~~~L~~~~~~Le~ 70 (174)
T 2p22_A 17 LQTVVNELYREDVD-------YVADKILTRQTVMQESIARFHEIIAIDKNHLRAVEQAIEQ 70 (174)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHTGGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 55666665543221 3578999998888544445556777777777777777664
No 156
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=21.52 E-value=82 Score=25.22 Aligned_cols=45 Identities=13% Similarity=0.227 Sum_probs=31.5
Q ss_pred CccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCC
Q 016591 29 DACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISL 77 (386)
Q Consensus 29 ~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~ 77 (386)
+.|..|...|. .......=+..||..|.... ....|..|.+.|..
T Consensus 31 F~C~~C~~~L~--~~~f~~~~g~~yC~~cy~~~--~~~~C~~C~~~I~~ 75 (126)
T 2xqn_T 31 FCCFDCDSILA--GEIYVMVNDKPVCKPCYVKN--HAVVCQGCHNAIDP 75 (126)
T ss_dssp SBCTTTCCBCT--TSEEEEETTEEEEHHHHHHH--SCCBCTTTCSBCCT
T ss_pred CCcCCCCCCCC--cCEEEeECCEEechHHhCcC--cCccCcccCCcCCc
Confidence 67888888773 22333356778999997653 35679999998874
No 157
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=21.40 E-value=37 Score=27.91 Aligned_cols=39 Identities=18% Similarity=0.440 Sum_probs=28.0
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCC
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPIS 76 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~ 76 (386)
...|.-|-..+.. ...+..-+..||..| +.|-.|...|.
T Consensus 61 ~~~C~~C~~~I~~--~~~v~a~~~~wH~~C--------F~C~~C~~~L~ 99 (123)
T 2l4z_A 61 WKRCAGCGGKIAD--RFLLYAMDSYWHSRC--------LKCSSCQAQLG 99 (123)
T ss_dssp CSBBSSSSSBCCS--SSEEEETTEEEETTT--------SBCTTTCCBGG
T ss_pred CCcCcCCCCCcCC--cEEEEeCCcEEcccc--------cCcCcCCCccc
Confidence 4679999988742 223334677888888 57889988875
No 158
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=21.07 E-value=37 Score=25.13 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=23.4
Q ss_pred CCccccccHHHHHHhhhhHHHHHHHHHhhhccC
Q 016591 304 NNTMADLGTEVRREVNAGISTVSRMMERLETRD 336 (386)
Q Consensus 304 ~~~~~~~~~~~~re~~agia~v~rm~e~l~~~~ 336 (386)
.-++.||...+..+-+-.-++|+|++.||+-.+
T Consensus 23 ~~t~~ei~~~l~~~~~~s~~Tv~~~l~rL~~kG 55 (82)
T 1p6r_A 23 SINTNEVIKELSKTSTWSPKTIQTMLLRLIKKG 55 (82)
T ss_dssp SEEHHHHHHHHHHHSCCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHhhcCCccHHHHHHHHHHHHHCC
Confidence 347778777765432235689999999998654
No 159
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.54 E-value=84 Score=22.41 Aligned_cols=42 Identities=26% Similarity=0.542 Sum_probs=27.5
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCCCC
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPISLK 78 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~~k 78 (386)
...|..|...+...+. .+..-+..||..| +.|-.|...|...
T Consensus 5 ~~~C~~C~~~I~~~~~-~~~a~~~~~H~~C--------F~C~~C~~~L~~~ 46 (72)
T 1wyh_A 5 SSGCSACGETVMPGSR-KLEYGGQTWHEHC--------FLCSGCEQPLGSR 46 (72)
T ss_dssp CCBCSSSCCBCCSSSC-EECSTTCCEETTT--------CBCTTTCCBTTTS
T ss_pred CCCCccCCCccccCcc-EEEECccccCccc--------CeECCCCCcCCCC
Confidence 4568999888743222 3334577788877 5688888777643
No 160
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=20.44 E-value=47 Score=24.80 Aligned_cols=36 Identities=19% Similarity=0.452 Sum_probs=20.1
Q ss_pred cCCCcccccccc-ccCCCCceeccCCccccHHHHHHH
Q 016591 26 ACDDACSICLED-FSESDPSTLTSCKHEFHLQCILEW 61 (386)
Q Consensus 26 ~ed~~C~ICle~-f~~~~pv~ll~CgH~FC~~CI~~W 61 (386)
.+...|.||+.. |.++.--....|.-.||..|-..|
T Consensus 7 ~d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v 43 (62)
T 2a20_A 7 GDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRV 43 (62)
T ss_dssp SCCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEE
T ss_pred CCcchhhhhccceeccCCCccccccCCeeecccCCEe
Confidence 457789999975 433222233345556665554333
No 161
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=20.40 E-value=44 Score=27.04 Aligned_cols=48 Identities=19% Similarity=0.428 Sum_probs=31.2
Q ss_pred CCccccccccccCCCCc-eec-cCCccccHHHHHHHH----------hcCCCCCCccccC
Q 016591 28 DDACSICLEDFSESDPS-TLT-SCKHEFHLQCILEWC----------QRSSQCPMCWQPI 75 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv-~ll-~CgH~FC~~CI~~Wl----------q~s~~CPlCR~~i 75 (386)
...|.||...+.+.... ..- .|..=||..|+.--. .....||.|+...
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 35699999987443333 332 578889999975211 0356799997643
No 162
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.19 E-value=44 Score=24.74 Aligned_cols=38 Identities=16% Similarity=0.293 Sum_probs=27.2
Q ss_pred CCccccccccccCCCCceeccCCccccHHHHHHHHhcCCCCCCccccCC
Q 016591 28 DDACSICLEDFSESDPSTLTSCKHEFHLQCILEWCQRSSQCPMCWQPIS 76 (386)
Q Consensus 28 d~~C~ICle~f~~~~pv~ll~CgH~FC~~CI~~Wlq~s~~CPlCR~~i~ 76 (386)
...|..|-..+.. . .+..-+..||..| +.|-.|...|.
T Consensus 15 ~~~C~~C~~~I~~-~--~~~a~~~~~H~~C--------F~C~~C~~~L~ 52 (79)
T 1x62_A 15 LPMCDKCGTGIVG-V--FVKLRDRHRHPEC--------YVCTDCGTNLK 52 (79)
T ss_dssp CCCCSSSCCCCCS-S--CEECSSCEECTTT--------TSCSSSCCCHH
T ss_pred CCccccCCCCccC-c--EEEECcceeCcCc--------CeeCCCCCCCC
Confidence 5679999998743 2 3335678888888 56888887764
No 163
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=20.07 E-value=37 Score=36.81 Aligned_cols=48 Identities=21% Similarity=0.496 Sum_probs=32.1
Q ss_pred CCccccccccccCCCC-------ceeccCCcc--------------------ccHHHHHHHHh---cC-----CCCCCcc
Q 016591 28 DDACSICLEDFSESDP-------STLTSCKHE--------------------FHLQCILEWCQ---RS-----SQCPMCW 72 (386)
Q Consensus 28 d~~C~ICle~f~~~~p-------v~ll~CgH~--------------------FC~~CI~~Wlq---~s-----~~CPlCR 72 (386)
-..|+-|+.++.+... +.++.||.. +|..|..++-. +. ..||.|-
T Consensus 111 ~a~C~~Cl~e~~dp~~Rry~ypF~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~~RRfhAqp~aC~~CG 190 (761)
T 3vth_A 111 MGVCEDCLRELKDPKDRRYRYPFINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPHDRRFHAQPVACFDCG 190 (761)
T ss_dssp BCCCHHHHHHHTCTTSTTTTCTTCCBTTBBCSGGGBCSSSCCGGGBGGGGSCCCHHHHHHHTCTTSTTTTCTTCCCTTTS
T ss_pred ccccHHHHHHhcCCCccccCCCcccCCCCCcchhhhccCCCCCCCCccccCCCCHHHHHHhcCcccccccCCCCcCCccC
Confidence 4669999998732211 356678755 49999999863 11 3599995
Q ss_pred ccC
Q 016591 73 QPI 75 (386)
Q Consensus 73 ~~i 75 (386)
-.+
T Consensus 191 P~l 193 (761)
T 3vth_A 191 PSL 193 (761)
T ss_dssp CCE
T ss_pred Cee
Confidence 544
Done!