Query 016592
Match_columns 386
No_of_seqs 225 out of 1844
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 08:14:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016592.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016592hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 1.8E-37 3.8E-42 304.2 33.0 268 106-373 46-350 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 6.2E-36 1.4E-40 287.9 29.3 266 109-374 2-296 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 3.3E-38 7.2E-43 299.7 9.6 271 106-378 14-314 (316)
4 KOG1444 Nucleotide-sugar trans 99.9 2.6E-25 5.6E-30 207.5 24.8 268 111-378 14-307 (314)
5 KOG1443 Predicted integral mem 99.9 7E-25 1.5E-29 202.0 16.8 265 107-371 14-315 (349)
6 PF08449 UAA: UAA transporter 99.9 2.7E-23 5.9E-28 200.2 28.3 260 115-376 6-302 (303)
7 PLN00411 nodulin MtN21 family 99.9 4.2E-23 9.2E-28 202.3 30.0 259 118-376 22-333 (358)
8 PRK11689 aromatic amino acid e 99.9 1.2E-22 2.6E-27 195.0 29.0 255 108-372 7-288 (295)
9 PRK11272 putative DMT superfam 99.9 5.3E-22 1.2E-26 190.2 31.2 263 107-374 6-288 (292)
10 PRK15430 putative chlorampheni 99.9 3.7E-21 8.1E-26 184.8 31.7 258 111-374 10-288 (296)
11 PRK10532 threonine and homoser 99.9 2.4E-21 5.3E-26 185.8 28.5 258 108-375 11-285 (293)
12 TIGR00950 2A78 Carboxylate/Ami 99.9 6.4E-21 1.4E-25 179.1 26.2 237 124-366 4-259 (260)
13 PRK11453 O-acetylserine/cystei 99.9 2.2E-20 4.7E-25 179.7 30.1 246 120-374 15-290 (299)
14 KOG1442 GDP-fucose transporter 99.9 1.7E-23 3.6E-28 189.9 3.8 275 109-383 28-339 (347)
15 PF06027 DUF914: Eukaryotic pr 99.9 6.2E-20 1.3E-24 177.0 22.8 258 118-375 22-309 (334)
16 TIGR03340 phn_DUF6 phosphonate 99.8 5.4E-18 1.2E-22 161.6 25.0 248 118-368 10-280 (281)
17 COG5070 VRG4 Nucleotide-sugar 99.8 6.1E-19 1.3E-23 156.0 14.4 259 114-378 11-303 (309)
18 COG0697 RhaT Permeases of the 99.8 4.5E-16 9.8E-21 147.4 32.2 262 110-372 8-288 (292)
19 TIGR00688 rarD rarD protein. T 99.8 1.9E-16 4.1E-21 148.8 25.7 222 119-346 12-255 (256)
20 KOG1581 UDP-galactose transpor 99.8 9.6E-17 2.1E-21 148.5 22.4 267 107-375 12-317 (327)
21 KOG1580 UDP-galactose transpor 99.7 1.9E-17 4.1E-22 147.7 12.2 235 135-371 50-313 (337)
22 TIGR00776 RhaT RhaT L-rhamnose 99.7 1.8E-14 3.8E-19 138.0 26.6 244 121-371 13-288 (290)
23 KOG1582 UDP-galactose transpor 99.7 2.2E-15 4.7E-20 137.2 18.6 268 103-373 36-334 (367)
24 COG5006 rhtA Threonine/homoser 99.7 3.1E-14 6.8E-19 128.7 22.2 238 126-373 29-284 (292)
25 KOG4510 Permease of the drug/m 99.6 1.3E-16 2.7E-21 145.0 2.2 264 105-374 35-328 (346)
26 KOG1583 UDP-N-acetylglucosamin 99.6 9.8E-16 2.1E-20 139.8 7.3 248 126-377 20-320 (330)
27 COG2962 RarD Predicted permeas 99.6 9.3E-12 2E-16 115.5 28.4 264 110-379 8-291 (293)
28 KOG2765 Predicted membrane pro 99.5 4.1E-13 8.9E-18 127.7 17.5 202 173-374 160-393 (416)
29 KOG3912 Predicted integral mem 99.5 2E-12 4.3E-17 118.5 19.8 248 122-373 16-336 (372)
30 PF03151 TPT: Triose-phosphate 99.5 4.3E-13 9.2E-18 115.8 12.1 119 253-371 1-153 (153)
31 PF04142 Nuc_sug_transp: Nucle 99.5 5.8E-12 1.3E-16 117.4 18.7 190 169-362 14-244 (244)
32 KOG2234 Predicted UDP-galactos 99.4 3.6E-10 7.7E-15 107.8 24.7 202 171-376 91-327 (345)
33 PF00892 EamA: EamA-like trans 99.3 5.2E-11 1.1E-15 98.4 11.1 120 122-243 4-125 (126)
34 COG2510 Predicted membrane pro 99.1 1.4E-09 3.1E-14 88.8 11.0 125 119-244 13-139 (140)
35 PF13536 EmrE: Multidrug resis 98.9 7.6E-09 1.7E-13 85.0 9.9 105 143-248 2-110 (113)
36 TIGR00803 nst UDP-galactose tr 98.9 3.8E-09 8.2E-14 97.2 8.1 174 196-369 2-222 (222)
37 PF06800 Sugar_transport: Suga 98.8 5.3E-07 1.2E-11 84.4 19.1 200 169-368 42-268 (269)
38 KOG4314 Predicted carbohydrate 98.8 2.2E-08 4.8E-13 87.9 7.7 203 171-373 52-278 (290)
39 TIGR00950 2A78 Carboxylate/Ami 98.7 9.5E-07 2.1E-11 82.8 17.9 129 110-239 129-259 (260)
40 KOG2766 Predicted membrane pro 98.7 9.2E-10 2E-14 100.0 -2.7 244 121-372 30-300 (336)
41 PLN00411 nodulin MtN21 family 98.5 7E-06 1.5E-10 81.0 17.3 126 118-244 198-328 (358)
42 PRK10532 threonine and homoser 98.4 1.6E-05 3.6E-10 76.2 17.9 130 112-244 151-281 (293)
43 PRK11689 aromatic amino acid e 98.4 1.3E-05 2.7E-10 77.1 16.1 128 112-244 159-287 (295)
44 PRK11272 putative DMT superfam 98.4 1.9E-05 4.1E-10 75.7 16.6 128 117-246 158-287 (292)
45 PRK15051 4-amino-4-deoxy-L-ara 98.3 1.9E-05 4.1E-10 64.6 13.7 65 180-244 45-109 (111)
46 PRK02971 4-amino-4-deoxy-L-ara 98.2 3.6E-05 7.8E-10 64.6 12.6 118 252-373 2-124 (129)
47 COG2510 Predicted membrane pro 98.2 4.9E-06 1.1E-10 68.4 6.8 118 253-370 4-138 (140)
48 PF05653 Mg_trans_NIPA: Magnes 98.2 2.9E-05 6.4E-10 74.7 12.9 62 181-242 59-120 (300)
49 PRK11453 O-acetylserine/cystei 98.2 0.00016 3.4E-09 69.6 17.9 134 112-245 146-288 (299)
50 TIGR03340 phn_DUF6 phosphonate 98.1 1.6E-05 3.4E-10 75.8 10.2 71 171-241 210-280 (281)
51 PF00892 EamA: EamA-like trans 98.1 1.1E-05 2.3E-10 66.3 6.7 69 302-370 56-125 (126)
52 PF03151 TPT: Triose-phosphate 98.1 0.00029 6.3E-09 60.4 15.9 131 113-243 4-152 (153)
53 TIGR00817 tpt Tpt phosphate/ph 98.0 6.9E-05 1.5E-09 72.1 12.9 134 110-244 146-293 (302)
54 PRK15430 putative chlorampheni 98.0 0.00024 5.2E-09 68.2 16.0 70 174-243 215-284 (296)
55 COG0697 RhaT Permeases of the 97.9 0.00096 2.1E-08 62.8 17.5 130 112-245 157-288 (292)
56 PRK15051 4-amino-4-deoxy-L-ara 97.8 0.00081 1.8E-08 55.0 13.7 106 253-370 2-108 (111)
57 PTZ00343 triose or hexose phos 97.8 0.00096 2.1E-08 65.7 16.9 136 108-243 193-347 (350)
58 TIGR00688 rarD rarD protein. T 97.8 0.00057 1.2E-08 64.1 14.0 118 252-370 2-141 (256)
59 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00046 1E-08 66.1 13.4 115 122-243 165-287 (290)
60 PRK13499 rhamnose-proton sympo 97.7 0.013 2.9E-07 57.2 23.1 259 108-371 6-341 (345)
61 PRK02971 4-amino-4-deoxy-L-ara 97.7 0.0018 3.9E-08 54.4 14.7 72 175-246 51-124 (129)
62 PRK10452 multidrug efflux syst 97.6 0.00072 1.6E-08 55.9 10.5 71 175-245 33-104 (120)
63 PRK09541 emrE multidrug efflux 97.5 0.0011 2.4E-08 54.0 10.4 70 176-245 34-104 (110)
64 PF13536 EmrE: Multidrug resis 97.5 0.00095 2.1E-08 54.6 10.0 71 302-373 37-108 (113)
65 PRK11431 multidrug efflux syst 97.5 0.0017 3.7E-08 52.5 10.6 71 174-244 31-102 (105)
66 PF08449 UAA: UAA transporter 97.4 0.0042 9.1E-08 59.9 15.0 136 110-245 155-298 (303)
67 PRK10650 multidrug efflux syst 97.4 0.0036 7.8E-08 50.9 11.8 69 175-243 38-107 (109)
68 COG2076 EmrE Membrane transpor 97.3 0.0019 4.2E-08 51.8 9.0 71 175-245 33-104 (106)
69 PRK10650 multidrug efflux syst 97.3 0.011 2.3E-07 48.1 13.2 104 248-370 3-107 (109)
70 COG5006 rhtA Threonine/homoser 97.3 0.0095 2E-07 55.0 14.0 129 110-240 149-278 (292)
71 PRK10452 multidrug efflux syst 97.2 0.0054 1.2E-07 50.7 11.2 102 253-373 3-105 (120)
72 PRK09541 emrE multidrug efflux 97.1 0.015 3.3E-07 47.4 12.7 102 253-373 3-105 (110)
73 PF06800 Sugar_transport: Suga 97.1 0.017 3.6E-07 54.5 13.9 73 167-240 191-267 (269)
74 COG2962 RarD Predicted permeas 97.0 0.013 2.8E-07 55.2 12.6 122 250-372 5-145 (293)
75 KOG2922 Uncharacterized conser 97.0 0.0016 3.5E-08 61.9 6.4 64 180-243 72-135 (335)
76 PF04142 Nuc_sug_transp: Nucle 97.0 0.0023 4.9E-08 59.8 7.4 76 300-375 18-93 (244)
77 COG4975 GlcU Putative glucose 96.9 0.00012 2.6E-09 66.8 -2.1 208 165-372 52-286 (288)
78 PRK11431 multidrug efflux syst 96.8 0.04 8.6E-07 44.5 12.6 98 255-371 4-102 (105)
79 PF06027 DUF914: Eukaryotic pr 96.7 0.057 1.2E-06 52.7 15.0 134 112-246 171-307 (334)
80 PF05653 Mg_trans_NIPA: Magnes 96.7 0.013 2.9E-07 56.4 10.4 115 250-369 5-120 (300)
81 COG2076 EmrE Membrane transpor 96.6 0.061 1.3E-06 43.3 12.0 55 318-372 49-104 (106)
82 PF00893 Multi_Drug_Res: Small 96.6 0.017 3.7E-07 45.5 8.7 58 178-235 35-93 (93)
83 PF04657 DUF606: Protein of un 96.6 0.1 2.2E-06 44.4 14.0 116 125-241 17-138 (138)
84 TIGR00803 nst UDP-galactose tr 96.4 0.039 8.5E-07 50.5 11.3 67 175-241 155-221 (222)
85 PF00893 Multi_Drug_Res: Small 95.9 0.11 2.5E-06 40.8 9.8 45 318-362 48-93 (93)
86 KOG1581 UDP-galactose transpor 95.5 0.33 7.1E-06 46.2 12.9 135 107-241 170-310 (327)
87 KOG4510 Permease of the drug/m 95.4 0.019 4.1E-07 53.4 4.1 77 166-242 247-323 (346)
88 PF10639 UPF0546: Uncharacteri 94.4 0.13 2.8E-06 42.0 6.1 69 172-241 42-111 (113)
89 COG3238 Uncharacterized protei 94.3 2 4.4E-05 36.8 13.4 119 123-243 19-145 (150)
90 KOG2234 Predicted UDP-galactos 93.8 0.23 5.1E-06 48.1 7.7 69 302-370 95-163 (345)
91 KOG1441 Glucose-6-phosphate/ph 93.4 0.29 6.4E-06 47.3 7.7 137 106-244 160-307 (316)
92 PF10639 UPF0546: Uncharacteri 93.2 0.43 9.4E-06 39.0 7.1 39 330-368 73-111 (113)
93 PRK13499 rhamnose-proton sympo 90.6 12 0.00026 36.8 15.2 69 176-245 264-342 (345)
94 KOG2765 Predicted membrane pro 90.4 3.2 7E-05 40.8 10.8 141 108-249 246-395 (416)
95 KOG4314 Predicted carbohydrate 89.3 0.19 4.1E-06 44.8 1.4 63 312-374 66-128 (290)
96 KOG1580 UDP-galactose transpor 87.5 0.92 2E-05 41.7 4.7 72 170-241 239-310 (337)
97 KOG2922 Uncharacterized conser 85.8 0.11 2.3E-06 49.8 -2.3 112 249-368 18-133 (335)
98 KOG1444 Nucleotide-sugar trans 84.0 5.7 0.00012 38.2 8.3 135 110-244 158-300 (314)
99 COG4975 GlcU Putative glucose 83.0 0.74 1.6E-05 42.6 1.9 68 165-233 203-270 (288)
100 COG5070 VRG4 Nucleotide-sugar 82.1 15 0.00032 33.8 9.7 125 117-242 163-294 (309)
101 PF06379 RhaT: L-rhamnose-prot 79.5 65 0.0014 31.5 14.3 160 110-272 8-193 (344)
102 PF06379 RhaT: L-rhamnose-prot 78.8 33 0.00071 33.6 11.6 53 326-378 101-160 (344)
103 PF04657 DUF606: Protein of un 74.1 18 0.00039 30.6 7.6 67 302-368 67-138 (138)
104 PF07857 DUF1632: CEO family ( 62.9 3.4 7.3E-05 38.8 0.9 73 304-376 60-139 (254)
105 COG5373 Predicted membrane pro 59.2 2.8E+02 0.0061 30.5 17.8 28 190-217 218-245 (931)
106 PRK02237 hypothetical protein; 58.7 18 0.0004 29.1 4.3 45 327-371 61-105 (109)
107 PF04342 DUF486: Protein of un 58.5 11 0.00024 30.3 3.0 31 338-368 75-105 (108)
108 PF08627 CRT-like: CRT-like; 57.5 9.3 0.0002 31.6 2.5 41 105-145 53-94 (130)
109 KOG3912 Predicted integral mem 57.1 30 0.00065 33.0 6.1 52 318-369 105-156 (372)
110 PF04342 DUF486: Protein of un 55.8 1.1E+02 0.0023 24.7 9.2 54 188-241 51-105 (108)
111 PF02694 UPF0060: Uncharacteri 55.5 28 0.00061 28.0 4.8 45 327-371 59-103 (107)
112 COG3238 Uncharacterized protei 44.8 88 0.0019 26.9 6.6 69 303-371 73-146 (150)
113 COG3169 Uncharacterized protei 44.2 52 0.0011 26.1 4.6 32 338-369 82-113 (116)
114 KOG1442 GDP-fucose transporter 43.5 33 0.00072 32.6 4.1 133 110-243 185-326 (347)
115 KOG1583 UDP-N-acetylglucosamin 42.1 75 0.0016 30.3 6.2 41 203-243 273-313 (330)
116 KOG4812 Golgi-associated prote 40.3 94 0.002 28.8 6.3 18 351-368 219-236 (262)
117 PRK02237 hypothetical protein; 38.4 57 0.0012 26.4 4.1 39 206-244 67-105 (109)
118 PF02694 UPF0060: Uncharacteri 38.0 53 0.0012 26.5 3.9 40 206-245 65-104 (107)
119 KOG1582 UDP-galactose transpor 34.4 2.5E+02 0.0053 26.9 8.2 76 173-248 261-336 (367)
120 PF06570 DUF1129: Protein of u 33.5 3.5E+02 0.0077 24.2 11.7 26 251-276 178-203 (206)
121 PF11044 TMEMspv1-c74-12: Plec 31.1 86 0.0019 21.0 3.4 10 364-373 21-30 (49)
122 KOG4831 Unnamed protein [Funct 29.9 82 0.0018 25.4 3.7 60 182-241 62-122 (125)
123 PF11346 DUF3149: Protein of u 29.0 62 0.0013 21.5 2.5 30 347-376 7-37 (42)
124 KOG4831 Unnamed protein [Funct 26.3 3.5E+02 0.0076 21.9 7.3 40 330-369 84-123 (125)
125 PF07444 Ycf66_N: Ycf66 protei 26.0 84 0.0018 24.2 3.1 26 350-375 4-29 (84)
126 cd01324 cbb3_Oxidase_CcoQ Cyto 22.5 1.1E+02 0.0023 20.9 2.8 21 359-379 19-39 (48)
127 COG1742 Uncharacterized conser 22.2 1.2E+02 0.0025 24.4 3.3 39 207-245 67-105 (109)
128 PF04246 RseC_MucC: Positive r 21.9 2.4E+02 0.0053 23.3 5.6 21 326-346 68-88 (135)
129 COG3086 RseC Positive regulato 21.9 4.2E+02 0.0091 22.7 6.8 11 342-352 96-106 (150)
130 COG3169 Uncharacterized protei 21.9 4.2E+02 0.009 21.1 11.0 31 212-242 83-113 (116)
131 PRK10263 DNA translocase FtsK; 21.6 1.3E+03 0.029 27.2 12.5 17 206-222 84-100 (1355)
132 COG3162 Predicted membrane pro 20.8 4.4E+02 0.0095 21.0 7.5 51 108-158 27-83 (102)
133 PF05977 MFS_3: Transmembrane 20.5 9.7E+02 0.021 24.9 19.4 27 320-346 341-367 (524)
134 PF05884 ZYG-11_interact: Inte 20.3 7.8E+02 0.017 23.7 13.2 119 107-233 102-224 (299)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.8e-37 Score=304.20 Aligned_cols=268 Identities=37% Similarity=0.591 Sum_probs=228.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHHHHH
Q 016592 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI--DSKLLKLLIPVAVCHA 183 (386)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 183 (386)
++++...+|++||.+|+..+++||++++++|+|++++.+|++++.+++.++|..+.+++++. .+++++.+++.|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999988777776655444444 3457899999999999
Q ss_pred HHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCccccHHHHHHHHHHHHH
Q 016592 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIS 263 (386)
Q Consensus 184 ~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~l~ 263 (386)
..+...+.|++++++++++++++++|+++++++++++|||++++++++++++++|+++++.+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHHHHHHHHhhhccc-------h--hch----hh------hHHHHhh------h----------chHHHHHHHHHHHHH
Q 016592 264 FTYRSIYSKKAMVEGP-------Q--LIK----HG------LSDAISK------V----------GMVKFISDLFWVGMF 308 (386)
Q Consensus 264 ~a~~~vl~k~~~~~g~-------~--l~~----~~------~~~~~~~------~----------~~~~~~~~l~~~gv~ 308 (386)
+++|+++.|+.+.+.. . ... .+ +....+. + .....+..++.++++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~ 285 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVW 285 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Confidence 9999999999873210 1 100 00 0000000 0 001122345567889
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHh
Q 016592 309 YHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 373 (386)
Q Consensus 309 ~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~ 373 (386)
++++|.+.|.++++++|.++++.+++||++++++|+++|||++|+.+++|.++++.|+++|++.|
T Consensus 286 ~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 286 YYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999764
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=6.2e-36 Score=287.90 Aligned_cols=266 Identities=58% Similarity=0.910 Sum_probs=221.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016592 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (386)
Q Consensus 109 ~~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (386)
.+.+++..||++|.+++++||++++++++|++++++|+.++.+++.+.+..+.+++.+.++++++.+++.|++++.++.+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999887777665554555667888999999999999999999
Q ss_pred HHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCccccHHHHHHHHHHHHHHHHHH
Q 016592 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRS 268 (386)
Q Consensus 189 ~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~~~ 268 (386)
.|.+++|++++++++++++.|+++++++++++|||++++++++++++++|+++....+.+++..|++++++++++|++|+
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877777888899999999999999999
Q ss_pred HHHHHhhh--ccchhchhhhHH-----------H-Hhhh--------------chHHHHHHHHHHHH-HHHHHHHHHHHH
Q 016592 269 IYSKKAMV--EGPQLIKHGLSD-----------A-ISKV--------------GMVKFISDLFWVGM-FYHLYNQLATNT 319 (386)
Q Consensus 269 vl~k~~~~--~g~~l~~~~~~~-----------~-~~~~--------------~~~~~~~~l~~~gv-~~~l~~~~~~~~ 319 (386)
++.||.+. +-..+....++. . .+.. .....+...+..+. +++++|...+.+
T Consensus 162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (302)
T TIGR00817 162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML 241 (302)
T ss_pred HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999763 111111000000 0 0000 00011221223333 455677777789
Q ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhh
Q 016592 320 LERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 374 (386)
Q Consensus 320 l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~ 374 (386)
+++++|.++++.++++|++++++|++++||++|+.+++|.++++.|+++|++.|.
T Consensus 242 l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999997654
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-38 Score=299.75 Aligned_cols=271 Identities=38% Similarity=0.547 Sum_probs=236.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHHHH
Q 016592 106 PALVTGFFFFMWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI-DSKLLKLLIPVAVCH 182 (386)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~i~nK~~l~--~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 182 (386)
+....+.++..||++|++.+++||++++ +||+|++++.+|++++.+.+.+.+..+..+..+. ++..++.++++|+++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 4677889999999999999999999999 8999999999999999999999988888776665 445899999999999
Q ss_pred HHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCccccHHHHHHHHHHHH
Q 016592 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 262 (386)
Q Consensus 183 ~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~l 262 (386)
++++++.|.|+.|++++++|++|+++|++++++++++.+|++++..++++++++.|+++++.+|.+||+.|+..++++++
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh-ccc-----hhchh-----------hhHHHHh----------hhchHHHHHHHHHHHHHHHHHHHH
Q 016592 263 SFTYRSIYSKKAMV-EGP-----QLIKH-----------GLSDAIS----------KVGMVKFISDLFWVGMFYHLYNQL 315 (386)
Q Consensus 263 ~~a~~~vl~k~~~~-~g~-----~l~~~-----------~~~~~~~----------~~~~~~~~~~l~~~gv~~~l~~~~ 315 (386)
.+++++++.|+++. ++. ++... ++....+ .+... . ..+.+..++++++|+.
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~sv~~f~~Nls 251 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-F-LILLLNSVLAFLLNLS 251 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-h-HHHHHHHHHHHHHHHH
Confidence 99999999999872 222 11110 1111100 11111 1 2233444999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhhhHH
Q 016592 316 ATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE 378 (386)
Q Consensus 316 ~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~~~~ 378 (386)
.|.+++++||+|+++.|++|++++++.|+++|+|++|+.|.+|+++++.|+++|++.|.+.++
T Consensus 252 ~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 252 AFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999999999999999999998876554
No 4
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=2.6e-25 Score=207.50 Aligned_cols=268 Identities=17% Similarity=0.231 Sum_probs=227.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH--HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016592 111 GFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSV--IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (386)
Q Consensus 111 ~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (386)
....+.|.++++.+.+.||+++++++||..+.. .|.+.+.+.+.++...|.-+.++++++..|.++|..+++.++.++
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t 93 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT 93 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence 344556667888899999999999998877666 999999999999988898888899999999999999999999999
Q ss_pred HHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCccccHHHHHHHHHHHHHHHHHH
Q 016592 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRS 268 (386)
Q Consensus 189 ~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~~~ 268 (386)
+..+++|+++++.+++|..+|+++++.+..++|.+++...|.++....+|......+|.++|..|+.|++...++.+.+.
T Consensus 94 ~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~ 173 (314)
T KOG1444|consen 94 GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFV 173 (314)
T ss_pred ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccch----hc-----------------hhhhH---HHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016592 269 IYSKKAMVEGPQ----LI-----------------KHGLS---DAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVA 324 (386)
Q Consensus 269 vl~k~~~~~g~~----l~-----------------~~~~~---~~~~~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s 324 (386)
++.|+...+... +. ...++ ...+.+....++..+.++|++++..++..+++.+..|
T Consensus 174 v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~S 253 (314)
T KOG1444|consen 174 VYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNS 253 (314)
T ss_pred HHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999987611110 10 01111 0011122345577888999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhhhHH
Q 016592 325 PLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE 378 (386)
Q Consensus 325 ~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~~~~ 378 (386)
++|.++++..+.....+...+++|+++++.+++|..+.+.|-.+|++.+.++++
T Consensus 254 AtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~ 307 (314)
T KOG1444|consen 254 ATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKK 307 (314)
T ss_pred ccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence 999999995555555555555667799999999999999999999998866544
No 5
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.93 E-value=7e-25 Score=201.95 Aligned_cols=265 Identities=20% Similarity=0.267 Sum_probs=220.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-CC---CCCCCCCH-HHHHHHHHHHHH
Q 016592 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GL---PKRAPIDS-KLLKLLIPVAVC 181 (386)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~-~~---~~~~~~~~-~~~~~~~~~~~~ 181 (386)
+...+.++++||++|++..+++|+.-.+|++|.+++.+|+++-.++....... +. +++.+.++ ++++...|++++
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala 93 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA 93 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence 56677777999999999999999999999999999999999988876654332 11 11234444 467888899999
Q ss_pred HHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCccccHHHHHHHHHHH
Q 016592 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN 261 (386)
Q Consensus 182 ~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~ 261 (386)
.++++.++|+|+.|++++++++.|++.++|+.+++..|.-||+++.-.+.+.++-+|+.+..+.+.+||..|+++++.+.
T Consensus 94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS 173 (349)
T KOG1443|consen 94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAAS 173 (349)
T ss_pred hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccc------hhchhh-----------------------hHHHHhhhchHHH---HHHHHHHHHHH
Q 016592 262 ISFTYRSIYSKKAMVEGP------QLIKHG-----------------------LSDAISKVGMVKF---ISDLFWVGMFY 309 (386)
Q Consensus 262 l~~a~~~vl~k~~~~~g~------~l~~~~-----------------------~~~~~~~~~~~~~---~~~l~~~gv~~ 309 (386)
++.+++..+.+.++...+ .-.... ....+...+.... ...+...|..+
T Consensus 174 ~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~la 253 (349)
T KOG1443|consen 174 LLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLA 253 (349)
T ss_pred HhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHH
Confidence 999999999999872221 100000 0011111121112 23455678888
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHH
Q 016592 310 HLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 371 (386)
Q Consensus 310 ~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~ 371 (386)
++...+.|.++++++.+|.++.+.+|.+...+++.++.+|.++..+++|..+.+.|+.+|..
T Consensus 254 F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 254 FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 99988999999999999999999999999999999999999999999999999999999944
No 6
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.93 E-value=2.7e-23 Score=200.18 Aligned_cols=260 Identities=20% Similarity=0.272 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHHHHHHhh--C-CchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 016592 115 FMWYFLNVIFNILNKRIYNY--F-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNV 191 (386)
Q Consensus 115 ~~w~~~~~~~~i~nK~~l~~--f-~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (386)
...|++.....++++++... . ++|+++++.|+++..+...+...... ..+.++..++.+.+.++++.++..++|.
T Consensus 6 ~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (303)
T PF08449_consen 6 AGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNA 83 (303)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555677777664 2 36999999999999887665443332 1223445678889999999999999999
Q ss_pred hhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCc----ccc------HHHHHHHHHHH
Q 016592 192 SFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----SFN------WTGFISAMISN 261 (386)
Q Consensus 192 al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~----~~~------~~G~~~~l~s~ 261 (386)
|++|++.++.+++|++.|+++++++++++|||++.+++++++++++|+++....|. +.+ ..|+++.+++.
T Consensus 84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl 163 (303)
T PF08449_consen 84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSL 163 (303)
T ss_pred HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876542 111 23999999999
Q ss_pred HHHHHHHHHHHHhhh----ccchhch--hh-----------------hHHHHhh-hchHHHHHHHHHHHHHHHHHHHHHH
Q 016592 262 ISFTYRSIYSKKAMV----EGPQLIK--HG-----------------LSDAISK-VGMVKFISDLFWVGMFYHLYNQLAT 317 (386)
Q Consensus 262 l~~a~~~vl~k~~~~----~g~~l~~--~~-----------------~~~~~~~-~~~~~~~~~l~~~gv~~~l~~~~~~ 317 (386)
++.+++.+++||... +..+.+. +. +.+.... ...+..+..+...++++++.+...+
T Consensus 164 ~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~ 243 (303)
T PF08449_consen 164 LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIF 243 (303)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999871 1111110 00 0000000 1223345566777777887777778
Q ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhhh
Q 016592 318 NTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 376 (386)
Q Consensus 318 ~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~~ 376 (386)
.++++.+|++.++..++++++++++|+++||+++++.+++|+++++.|..+|++.|+++
T Consensus 244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 89999999999999999999999999999999999999999999999999999887654
No 7
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.93 E-value=4.2e-23 Score=202.34 Aligned_cols=259 Identities=14% Similarity=0.083 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 016592 118 YFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA 195 (386)
Q Consensus 118 ~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 195 (386)
=.+..+++++.|..++.--.|+.+.++|+.++++++.++.+ .++ ++.++.+++++..+...|++.++.+.+.+.+++|
T Consensus 22 q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~ 101 (358)
T PLN00411 22 ETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEY 101 (358)
T ss_pred HHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34556778899999987434888999999999887765433 222 2223345667777787888776666789999999
Q ss_pred cchHHHHHHHhhhHHHHHHHHHHH------hCCcCChhhHHHHHHHHhhhhhcccC-Cc---------------------
Q 016592 196 VAVSFTHTIKALEPFFNAAASQFI------LGQQLPLTLWLSLAPVVIGVSMASLT-EL--------------------- 247 (386)
Q Consensus 196 vsvs~~~ii~s~~Pvf~~lls~l~------l~ek~s~~~~lsl~l~v~Gv~l~~~~-~~--------------------- 247 (386)
++++.+.++.++.|++++++++++ +|||++..++++++++++|+.+.... +.
T Consensus 102 tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~ 181 (358)
T PLN00411 102 SNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLS 181 (358)
T ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccC
Confidence 999999999999999999999999 69999999999999999999875431 10
Q ss_pred --ccc-HHHHHHHHHHHHHHHHHHHHHHHhhhccchh-chhhh-------HH----HH-hhhc-------hHHHHHHHHH
Q 016592 248 --SFN-WTGFISAMISNISFTYRSIYSKKAMVEGPQL-IKHGL-------SD----AI-SKVG-------MVKFISDLFW 304 (386)
Q Consensus 248 --~~~-~~G~~~~l~s~l~~a~~~vl~k~~~~~g~~l-~~~~~-------~~----~~-~~~~-------~~~~~~~l~~ 304 (386)
+.+ ..|.+++++++++|++|+++.|+....-+.. ....+ +. .. +..+ .......+++
T Consensus 182 ~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y 261 (358)
T PLN00411 182 SSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVT 261 (358)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHH
Confidence 112 4599999999999999999999876322111 10001 00 01 1000 0101112333
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhhh
Q 016592 305 VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 376 (386)
Q Consensus 305 ~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~~ 376 (386)
.+++..+.....++++++.+|.+.++..++.|++++++|++++||++++.+++|+++++.|+++.++.++++
T Consensus 262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 444332222233478999999999999999999999999999999999999999999999999988755444
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.92 E-value=1.2e-22 Score=194.98 Aligned_cols=255 Identities=13% Similarity=0.062 Sum_probs=183.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 016592 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHV 187 (386)
Q Consensus 108 l~~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (386)
+.....+++| .......|..++++| |+.+.++|+..+.+++.++. +.++ .++++++..+..++.+++.+.
T Consensus 7 l~~l~a~~~W----g~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~---~~~~~~~~~~~~~l~~~~~~~ 76 (295)
T PRK11689 7 LIGLIAILLW----STMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPR---LRQFPKRYLLAGGLLFVSYEI 76 (295)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cccc---cccccHHHHHHHhHHHHHHHH
Confidence 3444555555 445678899999998 99999999999988766542 1222 122233444444555666777
Q ss_pred HHHhhhhc----cchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCc-----------cccHH
Q 016592 188 TSNVSFAA----VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-----------SFNWT 252 (386)
Q Consensus 188 ~~~~al~~----vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~-----------~~~~~ 252 (386)
+.+.+++| .+...+.++.++.|+++.+++++++|||++++++++++++++|++++...+. +.+..
T Consensus 77 ~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK11689 77 CLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPL 156 (295)
T ss_pred HHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChH
Confidence 77777754 5677788999999999999999999999999999999999999988765432 12356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhch-h---hhH----HHHhh---hc-hHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016592 253 GFISAMISNISFTYRSIYSKKAMVEGPQLIK-H---GLS----DAISK---VG-MVKFISDLFWVGMFYHLYNQLATNTL 320 (386)
Q Consensus 253 G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~-~---~~~----~~~~~---~~-~~~~~~~l~~~gv~~~l~~~~~~~~l 320 (386)
|+++++++++||+.++++.||...+...... . ... ..... .. ....+..+.+.++...+.....++++
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al 236 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGI 236 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997521111100 0 000 00010 00 11223334444443333333445789
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHH
Q 016592 321 ERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 372 (386)
Q Consensus 321 ~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~ 372 (386)
++.+|.+.++..+++|+++++++++++||++++.+++|+++++.|+.+....
T Consensus 237 ~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 237 LHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 9999999999999999999999999999999999999999999999877543
No 9
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.92 E-value=5.3e-22 Score=190.24 Aligned_cols=263 Identities=15% Similarity=0.126 Sum_probs=197.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHH
Q 016592 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALG 185 (386)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 185 (386)
-+...+..++-.+.+.+..+..|..+++.+ |..++++|++++.+++.+....++.+ ..++++++.....|.+. ...
T Consensus 6 ~~~~~~~~~~~~~iWg~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~ 82 (292)
T PRK11272 6 LLPLFGALFALYIIWGSTYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVG 82 (292)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHH
Confidence 344445555556666777889999999888 99999999999988766544333222 22455666667777664 466
Q ss_pred HHHHHhhh-hccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC-CccccHHHHHHHHHHHHH
Q 016592 186 HVTSNVSF-AAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNIS 263 (386)
Q Consensus 186 ~~~~~~al-~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~-~~~~~~~G~~~~l~s~l~ 263 (386)
+.+.+.+. ++++++.+.++.++.|+++++++++ +|||++++++++++++++|+.+...+ +.+.+..|.+++++++++
T Consensus 83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~ 161 (292)
T PRK11272 83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASAS 161 (292)
T ss_pred HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHH
Confidence 77888888 9999999999999999999999986 69999999999999999999887643 345567899999999999
Q ss_pred HHHHHHHHHHhhhccchhchhhhH-----------HHH-hh-h---chHHHHHHHHHHHHHHHHHHH-HHHHHhhccchH
Q 016592 264 FTYRSIYSKKAMVEGPQLIKHGLS-----------DAI-SK-V---GMVKFISDLFWVGMFYHLYNQ-LATNTLERVAPL 326 (386)
Q Consensus 264 ~a~~~vl~k~~~~~g~~l~~~~~~-----------~~~-~~-~---~~~~~~~~l~~~gv~~~l~~~-~~~~~l~~~s~~ 326 (386)
|+.++++.||.....+.. ...++ ... .. . .....+..+.+.+++.....+ ..+.++++.++.
T Consensus 162 ~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~ 240 (292)
T PRK11272 162 WAFGSVWSSRLPLPVGMM-AGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPA 240 (292)
T ss_pred HHHHHHHHHhcCCCcchH-HHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 999999999975221111 00010 000 00 0 112234445555554433333 344788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhh
Q 016592 327 THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 374 (386)
Q Consensus 327 t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~ 374 (386)
+.++...++|+++.+++++++||++++.+++|+++++.|+++.++.++
T Consensus 241 ~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 241 LATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998876443
No 10
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.91 E-value=3.7e-21 Score=184.75 Aligned_cols=258 Identities=15% Similarity=0.111 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHH
Q 016592 111 GFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA----PIDSKLLKLLIPVAVCHALGH 186 (386)
Q Consensus 111 ~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 186 (386)
.++.++-.+++....++.|.. .+.+ |..+.++|++++.+++.+....+.+.+. ..+++++......++..+.++
T Consensus 10 ~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (296)
T PRK15430 10 VLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNW 87 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 334444444445555667875 5677 9999999999998765544332211100 012333333444556677889
Q ss_pred HHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCccccHHHHHHHHHHHHHHHH
Q 016592 187 VTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTY 266 (386)
Q Consensus 187 ~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~ 266 (386)
.+.++++++++++.+.++.++.|+++++++++++|||++++++++++++++|+.++...+.+.. .++++++++|+.
T Consensus 88 ~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~ 163 (296)
T PRK15430 88 LLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAF 163 (296)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998754322222 467889999999
Q ss_pred HHHHHHHhhhcc-chhc-hhhhH------HHH--hh-----hch--HHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHH
Q 016592 267 RSIYSKKAMVEG-PQLI-KHGLS------DAI--SK-----VGM--VKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 329 (386)
Q Consensus 267 ~~vl~k~~~~~g-~~l~-~~~~~------~~~--~~-----~~~--~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~t~s 329 (386)
|.++.|+...+. .... ...+. ... .. ... ...+..+...++...+.....+..+++.+|.+.+
T Consensus 164 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s 243 (296)
T PRK15430 164 YGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLG 243 (296)
T ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccCCcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 999999975321 1111 00000 000 00 001 1112223333433333334445789999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhh
Q 016592 330 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 374 (386)
Q Consensus 330 v~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~ 374 (386)
...+++|+++++++++++||++++.+++|+++++.|+.+......
T Consensus 244 ~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~ 288 (296)
T PRK15430 244 FFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI 288 (296)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988887765443
No 11
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.90 E-value=2.4e-21 Score=185.75 Aligned_cols=258 Identities=11% Similarity=0.017 Sum_probs=187.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 016592 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHV 187 (386)
Q Consensus 108 l~~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (386)
.....++++-.++........|+.++++| |..+.++|++++.+++.++...+. .+.++++++..+..|++....+.
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~ 86 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNY 86 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444556668999999998 999999999999887766543222 12356677777788888888888
Q ss_pred HHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC---CccccHHHHHHHHHHHHHH
Q 016592 188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---ELSFNWTGFISAMISNISF 264 (386)
Q Consensus 188 ~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~---~~~~~~~G~~~~l~s~l~~ 264 (386)
+.++++++++++.+.++..+.|+++++++. |++.. ...+.++++|+.++... ..+.+..|.+++++++++|
T Consensus 87 ~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~ 160 (293)
T PRK10532 87 LFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACW 160 (293)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHH
Confidence 999999999999999999999999998863 55544 45566788999876422 2234678999999999999
Q ss_pred HHHHHHHHHhhhccchhchhhhH---------H-HHhh---hchHHHHHHHHHHHHHHHHHHH-HHHHHhhccchHHHHH
Q 016592 265 TYRSIYSKKAMVEGPQLIKHGLS---------D-AISK---VGMVKFISDLFWVGMFYHLYNQ-LATNTLERVAPLTHAV 330 (386)
Q Consensus 265 a~~~vl~k~~~~~g~~l~~~~~~---------~-~~~~---~~~~~~~~~l~~~gv~~~l~~~-~~~~~l~~~s~~t~sv 330 (386)
+.|.++.||...+.+........ . .... ......+..+++.+++.....+ ..+..+++.++.+.++
T Consensus 161 a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~ 240 (293)
T PRK10532 161 AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT 240 (293)
T ss_pred HHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence 99999999986221111110000 0 0000 0011223334455555444444 3357899999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhh
Q 016592 331 GNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 375 (386)
Q Consensus 331 ~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~ 375 (386)
..+++|+++++++++++||++++.+++|.++++.|++.+.+..++
T Consensus 241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999866543
No 12
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.89 E-value=6.4e-21 Score=179.11 Aligned_cols=237 Identities=17% Similarity=0.156 Sum_probs=180.6
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-HHHHHHHHHHHhhhhccchHHHH
Q 016592 124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVA-VCHALGHVTSNVSFAAVAVSFTH 202 (386)
Q Consensus 124 ~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~vsvs~~~ 202 (386)
..+..|+.+++...|..+.+.|++.+.+++.+....+ .++++++.....+ +++.+++.+.+.|++|++++.+.
T Consensus 4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ 77 (260)
T TIGR00950 4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA 77 (260)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence 4567899888755589999999999988776654433 1233444444554 45678889999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC-CccccHHHHHHHHHHHHHHHHHHHHHHHhhhccc--
Q 016592 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNISFTYRSIYSKKAMVEGP-- 279 (386)
Q Consensus 203 ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~-~~~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~-- 279 (386)
++.++.|+++++++.+++|||++++++.+++++++|+.+.... +.+.+..|++++++++++|+.++++.|+...+.+
T Consensus 78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~ 157 (260)
T TIGR00950 78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPE 157 (260)
T ss_pred HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCch
Confidence 9999999999999999999999999999999999999887543 3455678999999999999999999999863221
Q ss_pred hhchhhhHH----------H-Hhh-h--chHHHHHHHHHHHHHHHHHHH-HHHHHhhccchHHHHHHHHHHHHHHHHHHH
Q 016592 280 QLIKHGLSD----------A-ISK-V--GMVKFISDLFWVGMFYHLYNQ-LATNTLERVAPLTHAVGNVLKRVFVIGFSI 344 (386)
Q Consensus 280 ~l~~~~~~~----------~-~~~-~--~~~~~~~~l~~~gv~~~l~~~-~~~~~l~~~s~~t~sv~~~l~~v~~il~s~ 344 (386)
......+.. . ... . .....+..+.+.+++.....+ ..++++++.++.+.++..+++|++++++++
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~ 237 (260)
T TIGR00950 158 LLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGL 237 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Confidence 111110100 0 000 0 011223345555555443333 445789999999999999999999999999
Q ss_pred HHhCCccchhhhHhHHHHHHHH
Q 016592 345 LAFGNKISTQTGIGTVIAIAGV 366 (386)
Q Consensus 345 l~fge~lt~~~~~G~~lii~Gv 366 (386)
+++||++++.+++|+++++.|+
T Consensus 238 ~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 238 LILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999986
No 13
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.89 E-value=2.2e-20 Score=179.68 Aligned_cols=246 Identities=15% Similarity=0.190 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHhhhhc-cc
Q 016592 120 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAA-VA 197 (386)
Q Consensus 120 ~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~-vs 197 (386)
++....+..|..+++++ |..+.++|+.++.+.+.+... .++ .+ ++..+..+++.. ....+.+.+++| ++
T Consensus 15 ~Wg~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~~---~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 85 (299)
T PRK11453 15 VWGLNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RPK---VP---LNLLLGYGLTISFGQFAFLFCAINFGMP 85 (299)
T ss_pred HHhhhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CCC---Cc---hHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33555677899998888 999999999997765444321 111 11 233444455433 344566778887 68
Q ss_pred hHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC---ccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 016592 198 VSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNISFTYRSIYSKKA 274 (386)
Q Consensus 198 vs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~---~~~~~~G~~~~l~s~l~~a~~~vl~k~~ 274 (386)
.+.+.++.++.|+++.+++++++|||++.+++++++++++|+.+....+ .+.++.|++++++++++|+.++++.||.
T Consensus 86 a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~ 165 (299)
T PRK11453 86 AGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKI 165 (299)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999998776432 2345679999999999999999999997
Q ss_pred hhc--cchhch-hhhH-------HH-----Hhh---------hchHHHHHHHHHHHHHHHHHHHHH-HHHhhccchHHHH
Q 016592 275 MVE--GPQLIK-HGLS-------DA-----ISK---------VGMVKFISDLFWVGMFYHLYNQLA-TNTLERVAPLTHA 329 (386)
Q Consensus 275 ~~~--g~~l~~-~~~~-------~~-----~~~---------~~~~~~~~~l~~~gv~~~l~~~~~-~~~l~~~s~~t~s 329 (386)
..+ .+.... ..+. .. .+. ......+..+++.+++.....+.. ++.+++.++.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s 245 (299)
T PRK11453 166 MSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVA 245 (299)
T ss_pred hcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 421 111110 0000 00 000 001123555666666655555544 3678999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhh
Q 016592 330 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 374 (386)
Q Consensus 330 v~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~ 374 (386)
+...++|+++++++++++||++++.+++|.++++.|+++..+.++
T Consensus 246 ~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 246 PLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 999999999999999999999999999999999999988765443
No 14
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=1.7e-23 Score=189.91 Aligned_cols=275 Identities=17% Similarity=0.271 Sum_probs=226.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh----CCchHHHHHHHHHHHHHHHHHHHH-h-CCC-----CCCCCCHHHHHHHHH
Q 016592 109 VTGFFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCLVSWA-V-GLP-----KRAPIDSKLLKLLIP 177 (386)
Q Consensus 109 ~~~~~~~~w~~~~~~~~i~nK~~l~~----f~~P~~lt~~r~~~~~l~l~~~~~-~-~~~-----~~~~~~~~~~~~~~~ 177 (386)
+.......++.+++.+.+.||++++. .+-|.++++.|+++...+++.+.. . +.+ +..++|-+..+.+.+
T Consensus 28 ~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlp 107 (347)
T KOG1442|consen 28 QVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLP 107 (347)
T ss_pred chhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcc
Confidence 34455667788889999999999985 568999999999999888775422 1 111 123366677889999
Q ss_pred HHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC---ccccHHHH
Q 016592 178 VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGF 254 (386)
Q Consensus 178 ~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~---~~~~~~G~ 254 (386)
+++.+.+++.++|+.++|++++++++-++++-+|+++++++++|||-+.....+..++++|.-+-.-.| ...+|.|.
T Consensus 108 lsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gv 187 (347)
T KOG1442|consen 108 LSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGV 187 (347)
T ss_pred hhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhh
Confidence 999999999999999999999999999999999999999999999999999999999999998876656 56789999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--hccchhch-------------------hhhHHHHh--hhchHHHHHHHHHHHHHHHH
Q 016592 255 ISAMISNISFTYRSIYSKKAM--VEGPQLIK-------------------HGLSDAIS--KVGMVKFISDLFWVGMFYHL 311 (386)
Q Consensus 255 ~~~l~s~l~~a~~~vl~k~~~--~~g~~l~~-------------------~~~~~~~~--~~~~~~~~~~l~~~gv~~~l 311 (386)
++++.+.++-|...++.||.. +....+.. +.++.... ......+|..+.++|+++|.
T Consensus 188 ifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~ 267 (347)
T KOG1442|consen 188 IFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFA 267 (347)
T ss_pred HHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876 11111111 11122111 11233567778889999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhhhHHHHhhc
Q 016592 312 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQM 383 (386)
Q Consensus 312 ~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~~~~~~~~~ 383 (386)
+|++..+-++.+||+|+.+.++.|....++++..+++|..+..-|-|-++++.|...|++.|+.+.+++.++
T Consensus 268 mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~ 339 (347)
T KOG1442|consen 268 MGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQ 339 (347)
T ss_pred hhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999999999999999999999999999998777665443
No 15
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.86 E-value=6.2e-20 Score=176.98 Aligned_cols=258 Identities=13% Similarity=0.134 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHHHhh-CCchHHHHHHHHHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 016592 118 YFLNVIFNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGL--PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFA 194 (386)
Q Consensus 118 ~~~~~~~~i~nK~~l~~-f~~P~~lt~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 194 (386)
.++..+.+..+.++-++ ++.|.+-+++.++.-.++.......+. .+..+..+++++..+..+++...++.+.+.|++
T Consensus 22 sl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~ 101 (334)
T PF06027_consen 22 SLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQ 101 (334)
T ss_pred HHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34445556666666554 667888888877665554332222222 122222334556667779999999999999999
Q ss_pred ccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCc---------cccHHHHHHHHHHHHHHH
Q 016592 195 AVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNISFT 265 (386)
Q Consensus 195 ~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~---------~~~~~G~~~~l~s~l~~a 265 (386)
|++++.++++.++..+++++++++++|+|+++.+++|++++++|++++...|. +....|++++++++++||
T Consensus 102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya 181 (334)
T PF06027_consen 102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYA 181 (334)
T ss_pred cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765542 234789999999999999
Q ss_pred HHHHHHHHhhhccchhchh-----------hhHH------HHhhhchH-HHHHHHHHHHHHHHHHHHHHHHHhhccchHH
Q 016592 266 YRSIYSKKAMVEGPQLIKH-----------GLSD------AISKVGMV-KFISDLFWVGMFYHLYNQLATNTLERVAPLT 327 (386)
Q Consensus 266 ~~~vl~k~~~~~g~~l~~~-----------~~~~------~~~~~~~~-~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~t 327 (386)
+++++.|+...+.+..... +.+. .++...+. ..+..++..+++.+......-..++..+|+.
T Consensus 182 ~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~ 261 (334)
T PF06027_consen 182 VSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATF 261 (334)
T ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccce
Confidence 9999998876222211100 0010 01111111 1122222222222222222223688999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhh
Q 016592 328 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 375 (386)
Q Consensus 328 ~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~ 375 (386)
.++......+.++++++++||+++++..++|.++++.|+++|+..+.+
T Consensus 262 ~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 262 FNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred eehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 999888889999999999999999999999999999999999876544
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.82 E-value=5.4e-18 Score=161.63 Aligned_cols=248 Identities=15% Similarity=0.154 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 016592 118 YFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA 195 (386)
Q Consensus 118 ~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 195 (386)
.++....++++|...++-+ +. .++++..+.+.+.+....+ .++.++.+++++...+..++.....+.+.+.++++
T Consensus 10 a~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (281)
T TIGR03340 10 ALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHH 86 (281)
T ss_pred HHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3344566778897766532 32 3555655555554433222 22223334555555666666778889999999999
Q ss_pred cchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC-ccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 016592 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-LSFNWTGFISAMISNISFTYRSIYSKKA 274 (386)
Q Consensus 196 vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~-~~~~~~G~~~~l~s~l~~a~~~vl~k~~ 274 (386)
.+++.+.++.++.|+++++++++++||+++.+++++++++++|+.+....+ .+.+..|+.++++++++|+.|+++.|+.
T Consensus 87 ~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~ 166 (281)
T TIGR03340 87 ADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAA 166 (281)
T ss_pred CChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcccc
Confidence 999999999999999999999999999999999999999999998775433 2345678889999999999999999876
Q ss_pred hhccch-h---chhhh-------HHHH-----hhhc---h-HHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHH
Q 016592 275 MVEGPQ-L---IKHGL-------SDAI-----SKVG---M-VKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVL 334 (386)
Q Consensus 275 ~~~g~~-l---~~~~~-------~~~~-----~~~~---~-~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l 334 (386)
..+.+. . ....+ .... .... . ...+..+...++...+.+...+..+++.++.+.+...++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l 246 (281)
T TIGR03340 167 ALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNT 246 (281)
T ss_pred ccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeeccc
Confidence 421110 0 00000 0000 0000 0 111222222233333333344578999999999999999
Q ss_pred HHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016592 335 KRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 368 (386)
Q Consensus 335 ~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~l 368 (386)
.|+++++++++++||++++.+++|.++++.|+.+
T Consensus 247 ~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 247 SIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999875
No 17
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.80 E-value=6.1e-19 Score=155.98 Aligned_cols=259 Identities=15% Similarity=0.182 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 016592 114 FFMWYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNV 191 (386)
Q Consensus 114 ~~~w~~~~~~~~i~nK~~l~~--f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (386)
.+.|.+.++.+.+.||++++. |+..+.+.+.|-.++.+.+.++.+.+..+ ++.++.|.+++.+++....++...-
T Consensus 11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~---fR~t~aK~WfpiSfLLv~MIyt~SK 87 (309)
T COG5070 11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE---FRLTKAKKWFPISFLLVVMIYTSSK 87 (309)
T ss_pred HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh---eehhhhhhhcCHHHHHHHHHHhccc
Confidence 445667888999999999986 66668888899888888777776666533 3345677889999999999999999
Q ss_pred hhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCc--------cccHHHHHHHHHHHHH
Q 016592 192 SFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNIS 263 (386)
Q Consensus 192 al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~--------~~~~~G~~~~l~s~l~ 263 (386)
+++|.+++.+++.|.++.+.++....+++|.+.+-....+.++.++..+.+.++|. ..| .|++|+...++.
T Consensus 88 sLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncls 166 (309)
T COG5070 88 SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLS 166 (309)
T ss_pred ceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHh
Confidence 99999999999999999999999999999999999999999999999999998886 334 599999999999
Q ss_pred HHHHHHHHHHhh-------hc---------cchhchhhhHHHHhhhchH--------HHHHHHHHHHHHHHHHHHHHHHH
Q 016592 264 FTYRSIYSKKAM-------VE---------GPQLIKHGLSDAISKVGMV--------KFISDLFWVGMFYHLYNQLATNT 319 (386)
Q Consensus 264 ~a~~~vl~k~~~-------~~---------g~~l~~~~~~~~~~~~~~~--------~~~~~l~~~gv~~~l~~~~~~~~ 319 (386)
.+.+-...|+.. .+ -|.++. +....+++... ....++..+|++.+...+++-|+
T Consensus 167 saafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~--~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWc 244 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLS--FSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWC 244 (309)
T ss_pred HHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHH--HHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhcccee
Confidence 999988887754 11 111110 11112222221 23456788999999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhhhHH
Q 016592 320 LERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE 378 (386)
Q Consensus 320 l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~~~~ 378 (386)
++.+|.+++++++.+++....+.|.++||++.+...+..+.+-+....+|.+.|.++++
T Consensus 245 vrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q 303 (309)
T COG5070 245 VRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ 303 (309)
T ss_pred EeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988766444
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.79 E-value=4.5e-16 Score=147.44 Aligned_cols=262 Identities=18% Similarity=0.174 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 016592 110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTS 189 (386)
Q Consensus 110 ~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (386)
...+..++...+.......|...++...+....+.|+..+.+........+.....+..++.++..+..++.......+.
T Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (292)
T COG0697 8 GLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLL 87 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 34444445455555666777777763335666677998888773333322211112222223445555666677889999
Q ss_pred HhhhhccchHHHHHHHhhhHHHHHHHHH-HHhCCcCChhhHHHHHHHHhhhhhcccCCcccc---HHHHHHHHHHHHHHH
Q 016592 190 NVSFAAVAVSFTHTIKALEPFFNAAASQ-FILGQQLPLTLWLSLAPVVIGVSMASLTELSFN---WTGFISAMISNISFT 265 (386)
Q Consensus 190 ~~al~~vsvs~~~ii~s~~Pvf~~lls~-l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~~---~~G~~~~l~s~l~~a 265 (386)
+.++++++++.++++.++.|+++.+++. +++|||+++.++.+++.+++|+.++...+...+ ..|..+++.+.++++
T Consensus 88 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a 167 (292)
T COG0697 88 FLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWA 167 (292)
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997 777999999999999999999999887665433 589999999999999
Q ss_pred HHHHHHHHhhhccchhchhh-hH----------HHHhhh---chHHHHHHHHHHHHHHHH-HHHHHHHHhhccchHHHHH
Q 016592 266 YRSIYSKKAMVEGPQLIKHG-LS----------DAISKV---GMVKFISDLFWVGMFYHL-YNQLATNTLERVAPLTHAV 330 (386)
Q Consensus 266 ~~~vl~k~~~~~g~~l~~~~-~~----------~~~~~~---~~~~~~~~l~~~gv~~~l-~~~~~~~~l~~~s~~t~sv 330 (386)
.+.++.|+.. +........ +. ...... .....+..+.+.+++... .....+..+++.++...+.
T Consensus 168 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 246 (292)
T COG0697 168 LYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVAL 246 (292)
T ss_pred HHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHH
Confidence 9999999875 211111100 10 000100 111223444455555443 3344457899999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHH
Q 016592 331 GNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 372 (386)
Q Consensus 331 ~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~ 372 (386)
...+.|+.+++++++++||+++..+++|.++++.|+.+.+..
T Consensus 247 ~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 247 LSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999998765
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.77 E-value=1.9e-16 Score=148.84 Aligned_cols=222 Identities=10% Similarity=0.018 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHH-HhCCCC-----CCCCCHH-HHHHHHHHHHHHHHHHHHHHh
Q 016592 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPK-----RAPIDSK-LLKLLIPVAVCHALGHVTSNV 191 (386)
Q Consensus 119 ~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~-~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 191 (386)
+++....+..|+ ..+.+ |..+.++|++++.+++.+.. ..+.++ ..+.+++ ++..+...+++.+++..+.+.
T Consensus 12 ~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (256)
T TIGR00688 12 FLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIW 89 (256)
T ss_pred HHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 334555677898 45677 99999999999987755433 222211 0111222 244466677778889999999
Q ss_pred hhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCccccHHHHHHHHHHHHHHHHHHHHH
Q 016592 192 SFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYS 271 (386)
Q Consensus 192 al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~~~vl~ 271 (386)
++++++++.++++.++.|+++++++++++|||++++++++++++++|+++....+.+.+ .++++++++|+.|.+..
T Consensus 90 a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~ 165 (256)
T TIGR00688 90 AVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIR 165 (256)
T ss_pred HHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987654322222 35788999999999999
Q ss_pred HHhhhcc-chhchhh-----hH--HH-Hhhh------chHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHH
Q 016592 272 KKAMVEG-PQLIKHG-----LS--DA-ISKV------GMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKR 336 (386)
Q Consensus 272 k~~~~~g-~~l~~~~-----~~--~~-~~~~------~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~ 336 (386)
|+...+. .+..... .. .. .... .....|..+...|++..+.....+..+++.++.+.++..+++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~P 245 (256)
T TIGR00688 166 KALKNTDLAGFCLETLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGP 245 (256)
T ss_pred hhcCCCCcchHHHHHHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 9874211 1111100 00 00 0000 1112344455555554444445557899999999999999999
Q ss_pred HHHHHHHHHH
Q 016592 337 VFVIGFSILA 346 (386)
Q Consensus 337 v~~il~s~l~ 346 (386)
+++.++++++
T Consensus 246 v~~~~~~~~~ 255 (256)
T TIGR00688 246 TIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHh
Confidence 9999999865
No 20
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.77 E-value=9.6e-17 Score=148.53 Aligned_cols=267 Identities=15% Similarity=0.140 Sum_probs=209.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHh--------hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 016592 107 ALVTGFFFFMWYFLNVIFNILNKRIYN--------YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178 (386)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~i~nK~~l~--------~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (386)
.+...+++.--|.......++++.+.+ .|.+|.++.+.|-+++.++-.....- .+.....++.++.....
T Consensus 12 ~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~--~k~~~~~~apl~~y~~i 89 (327)
T KOG1581|consen 12 IILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKW--WKKELSGVAPLYKYSLI 89 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhc--ccccCCCCCchhHHhHH
Confidence 344555555556666667777777765 27789999999988888866443221 22223334567777888
Q ss_pred HHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCc---------cc
Q 016592 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------SF 249 (386)
Q Consensus 179 ~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~---------~~ 249 (386)
++...++..+.+.|++|++-+...+.|++..+.+++.+.++.|+|++..+++...++..|+.+....+. ..
T Consensus 90 s~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~n 169 (327)
T KOG1581|consen 90 SFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGREN 169 (327)
T ss_pred HHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999987754421 24
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhh----hccchhchh-----------------hhHHHHhh-hchHHHHHHHHHHHH
Q 016592 250 NWTGFISAMISNISFTYRSIYSKKAM----VEGPQLIKH-----------------GLSDAISK-VGMVKFISDLFWVGM 307 (386)
Q Consensus 250 ~~~G~~~~l~s~l~~a~~~vl~k~~~----~~g~~l~~~-----------------~~~~~~~~-~~~~~~~~~l~~~gv 307 (386)
.++|+.++....+..++.+..++++. +++.+++.. .+...++. -.+++.+..+++.++
T Consensus 170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~ 249 (327)
T KOG1581|consen 170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST 249 (327)
T ss_pred chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence 57999999999999999999998876 333333311 00111111 123456777888888
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhh
Q 016592 308 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 375 (386)
Q Consensus 308 ~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~ 375 (386)
++...+...|..+++.+|++.++.++.+..+++++|.+.||+++++.|++|..+++.|+.+-.+.|++
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 88878877888999999999999999999999999999999999999999999999999988777766
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.74 E-value=1.9e-17 Score=147.67 Aligned_cols=235 Identities=17% Similarity=0.172 Sum_probs=187.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHH
Q 016592 135 FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAA 214 (386)
Q Consensus 135 f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~l 214 (386)
|.+...+.++|+....++.-++... +++.+.|+..-+....+++.+.+.++..|.+++|++.+...+-|++.|+.+++
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~i--r~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi 127 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLI--RKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI 127 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheee--cccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence 6677888999999998877655432 23344555555677888999999999999999999999999999999999999
Q ss_pred HHHHHhCCcCChhhHHHHHHHHhhhhhcccCCc-------cccHHHHHHHHHHHHHHHHHHHHHHHhh----hccchhch
Q 016592 215 ASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------SFNWTGFISAMISNISFTYRSIYSKKAM----VEGPQLIK 283 (386)
Q Consensus 215 ls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~-------~~~~~G~~~~l~s~l~~a~~~vl~k~~~----~~g~~l~~ 283 (386)
++.++.+++++++++.+++++++|+++.-+.|. ...-.|.++.++|--..+.....+++.- ..|.+++.
T Consensus 128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~ 207 (337)
T KOG1580|consen 128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMF 207 (337)
T ss_pred eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHH
Confidence 999999999999999999999999999876542 2224789999999988888888887654 23444432
Q ss_pred h--hhHHH------------Hh----hhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Q 016592 284 H--GLSDA------------IS----KVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIL 345 (386)
Q Consensus 284 ~--~~~~~------------~~----~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l 345 (386)
. .|+.. ++ ....+..+..+...++++.+.+...|..+...+|++.|+..+.++.++++.|++
T Consensus 208 ~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVl 287 (337)
T KOG1580|consen 208 YTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVL 287 (337)
T ss_pred HHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHH
Confidence 1 11111 01 112234455677778888888888899999999999999999999999999999
Q ss_pred HhCCccchhhhHhHHHHHHHHHHHHH
Q 016592 346 AFGNKISTQTGIGTVIAIAGVAAYSY 371 (386)
Q Consensus 346 ~fge~lt~~~~~G~~lii~Gv~ly~~ 371 (386)
+|+++++..||+|.++++.+...-..
T Consensus 288 lf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 288 LFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 99999999999999999999876543
No 22
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.69 E-value=1.8e-14 Score=138.05 Aligned_cols=244 Identities=17% Similarity=0.188 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 016592 121 NVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (386)
Q Consensus 121 ~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs 199 (386)
+.+..+..|++. .++.++.+ |..++.+++... ...+.++ ..+++.+..-+..|++...++.+.+.+.++++++
T Consensus 13 wGs~g~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva 86 (290)
T TIGR00776 13 WGSFVLINVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQINQFKSMRYMGVS 86 (290)
T ss_pred HhhhHHHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHH
Confidence 344556667665 45534333 676676654432 2222222 1124445555666777889999999999999999
Q ss_pred HHHHHHh-hhHHHHHHHHHHHhCCcCChhh----HHHHHHHHhhhhhcccCCcc-------cc-HHHHHHHHHHHHHHHH
Q 016592 200 FTHTIKA-LEPFFNAAASQFILGQQLPLTL----WLSLAPVVIGVSMASLTELS-------FN-WTGFISAMISNISFTY 266 (386)
Q Consensus 200 ~~~ii~s-~~Pvf~~lls~l~l~ek~s~~~----~lsl~l~v~Gv~l~~~~~~~-------~~-~~G~~~~l~s~l~~a~ 266 (386)
.+..+.+ +.+++..+.+.+++||+.++++ +++++++++|+++....+.+ .+ ..|++++++|.++|++
T Consensus 87 ~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~ 166 (290)
T TIGR00776 87 KTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLV 166 (290)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHH
Confidence 9999988 8888999999999999999999 99999999999987543211 33 6899999999999999
Q ss_pred HHHHHHHhhhccchhc-hhhhH----H-----HH---hhhchHHHHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHH
Q 016592 267 RSIYSKKAMVEGPQLI-KHGLS----D-----AI---SKVGMVKFISDLFWVGMFYHLYNQLATNTLE-RVAPLTHAVGN 332 (386)
Q Consensus 267 ~~vl~k~~~~~g~~l~-~~~~~----~-----~~---~~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~-~~s~~t~sv~~ 332 (386)
|.+..|....++.... +..+. . .. ........+. ....|++..+-+...+...+ +.++.+.++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls 245 (290)
T TIGR00776 167 YVVVAKAFGVDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILL-NILPGLMWGIGNFFYLFSAQPKVGVATSFSLS 245 (290)
T ss_pred HHHHHHHcCCCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHH-HHHHHHHHHHHHHHHHHHcccccchhhHHHHH
Confidence 9999998753332221 11110 0 00 0111112222 23366664333334446778 99999999999
Q ss_pred HHHHHHHHHHHHHHhCCccchhhh----HhHHHHHHHHHHHHH
Q 016592 333 VLKRVFVIGFSILAFGNKISTQTG----IGTVIAIAGVAAYSY 371 (386)
Q Consensus 333 ~l~~v~~il~s~l~fge~lt~~~~----~G~~lii~Gv~ly~~ 371 (386)
.++|+.++++++++++|+.++.|+ +|.++++.|+.+...
T Consensus 246 ~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 246 QLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999 999999999988654
No 23
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.69 E-value=2.2e-15 Score=137.17 Aligned_cols=268 Identities=16% Similarity=0.170 Sum_probs=202.5
Q ss_pred ccccchHHH-HHHHHHHHHHHHHHHHHHHHHhh--C-CchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 016592 103 DRYPALVTG-FFFFMWYFLNVIFNILNKRIYNY--F-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178 (386)
Q Consensus 103 ~~~~~l~~~-~~~~~w~~~~~~~~i~nK~~l~~--f-~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (386)
.++++|... +++...++.......+.+++++. | |+.|.+|+.|+++=..+-++-.. ....++ ....|+....+
T Consensus 36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~-~~~~k~--r~iP~rtY~~l 112 (367)
T KOG1582|consen 36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ-LIQTKR--RVIPWRTYVIL 112 (367)
T ss_pred ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE-eecccc--eecchhHhhhh
Confidence 444555544 44444555556666889999885 4 58899999998876543332111 111111 12356778888
Q ss_pred HHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC----ccccHHHH
Q 016592 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----LSFNWTGF 254 (386)
Q Consensus 179 ~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~----~~~~~~G~ 254 (386)
+++..+.+.++|-|+.|.+.+...+.|++.-+.+++.+.++-|+|+.+..+.+..+..+|+++....| .+||..|+
T Consensus 113 a~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv 192 (367)
T KOG1582|consen 113 AFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGV 192 (367)
T ss_pred HhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeH
Confidence 99999999999999999999999999999999999999999999999999999999999999987766 48899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc---------------cchhchh------hhHHHHhh-h-chHHHHHHHHHHHHHHHH
Q 016592 255 ISAMISNISFTYRSIYSKKAMVE---------------GPQLIKH------GLSDAISK-V-GMVKFISDLFWVGMFYHL 311 (386)
Q Consensus 255 ~~~l~s~l~~a~~~vl~k~~~~~---------------g~~l~~~------~~~~~~~~-~-~~~~~~~~l~~~gv~~~l 311 (386)
++.-.+-++.|+-.-.+++.+.. |..++.. +.-.++.. . ++.....+.++-.+.+++
T Consensus 193 ~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gyl 272 (367)
T KOG1582|consen 193 MMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYL 272 (367)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHh
Confidence 99999999999887777766611 1111110 00011111 1 122245566666777777
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHh
Q 016592 312 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 373 (386)
Q Consensus 312 ~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~ 373 (386)
........++..++.+.....+.++.+++++|+++|.+|+|.+..-|..+++.|+++--+.|
T Consensus 273 G~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 273 GIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 77777788999999999999999999999999999999999999999999999999866555
No 24
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.66 E-value=3.1e-14 Score=128.70 Aligned_cols=238 Identities=14% Similarity=0.131 Sum_probs=178.3
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHH
Q 016592 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK 205 (386)
Q Consensus 126 i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~ 205 (386)
-+.|.++..++ |.-++.+|...+.+.+..++. |.+.+.+++++..+...|++....|.++|.++..++.+.+..+.
T Consensus 29 s~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~R---Pwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiE 104 (292)
T COG5006 29 SFAKSLFPLVG-AAGVTALRLAIAALILLALFR---PWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIE 104 (292)
T ss_pred HHHHHHccccC-hhhHHHHHHHHHHHHHHHHhh---HHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence 46788877777 899999999999998777664 22345677888999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC---ccccHHHHHHHHHHHHHHHHHHHHHHHhh--hccch
Q 016592 206 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNISFTYRSIYSKKAM--VEGPQ 280 (386)
Q Consensus 206 s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~---~~~~~~G~~~~l~s~l~~a~~~vl~k~~~--~~g~~ 280 (386)
++.|+.+.+++. +| .+..+.+.+.+.|+.+..... .+.|..|..+++.+..||+.|.+..||.- .+|..
T Consensus 105 F~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~ 178 (292)
T COG5006 105 FTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTA 178 (292)
T ss_pred hccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCch
Confidence 999999988653 33 345555566777887654332 56789999999999999999999999975 23332
Q ss_pred hchhhhH------------HHHhhhchHHHHHHHHHHHHHHHHHHH-HHHHHhhccchHHHHHHHHHHHHHHHHHHHHHh
Q 016592 281 LIKHGLS------------DAISKVGMVKFISDLFWVGMFYHLYNQ-LATNTLERVAPLTHAVGNVLKRVFVIGFSILAF 347 (386)
Q Consensus 281 l~~~~~~------------~~~~~~~~~~~~~~l~~~gv~~~l~~~-~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~f 347 (386)
-...+.. +.-..+..+.....-+..++++...-| ...-++++.++-++++...++|.++.+.+++++
T Consensus 179 g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L 258 (292)
T COG5006 179 GVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFL 258 (292)
T ss_pred HHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHh
Confidence 2221111 110111122222233334444443333 334578999999999999999999999999999
Q ss_pred CCccchhhhHhHHHHHHHHHHHHHHh
Q 016592 348 GNKISTQTGIGTVIAIAGVAAYSYIK 373 (386)
Q Consensus 348 ge~lt~~~~~G~~lii~Gv~ly~~~~ 373 (386)
||.+|+.||+|++.++.+..-.+...
T Consensus 259 ~e~ls~~qwlaI~~ViaAsaG~~lt~ 284 (292)
T COG5006 259 GETLTLIQWLAIAAVIAASAGSTLTA 284 (292)
T ss_pred cCCCCHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999887655443
No 25
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.62 E-value=1.3e-16 Score=144.97 Aligned_cols=264 Identities=17% Similarity=0.133 Sum_probs=183.8
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHHHHH
Q 016592 105 YPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKR-APIDSKLLKLLIPVAVCHA 183 (386)
Q Consensus 105 ~~~l~~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 183 (386)
.++..+.+.... |+.|.++.+..|-+.+ .|..+...|+++-.+..+++.......- .|-.++ +.+++.|++..
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R--~~LiLRg~mG~ 108 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKR--KWLILRGFMGF 108 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcE--EEEEeehhhhh
Confidence 444444444444 6777777777665543 4899999997776665554322111100 111111 23455688888
Q ss_pred HHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC-----C---------ccc
Q 016592 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-----E---------LSF 249 (386)
Q Consensus 184 ~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~-----~---------~~~ 249 (386)
.+....++|++|.+.+.+.+|..+.|+|+.++++.++||++++...++..+.+.||++.... | .+.
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~ 188 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEY 188 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccc
Confidence 88889999999999999999999999999999999999999999999999999999987432 1 123
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccchhch-hhhH------HH-----HhhhchHH---HHHHHHHHHHHHHHHHH
Q 016592 250 NWTGFISAMISNISFTYRSIYSKKAMVEGPQLIK-HGLS------DA-----ISKVGMVK---FISDLFWVGMFYHLYNQ 314 (386)
Q Consensus 250 ~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~-~~~~------~~-----~~~~~~~~---~~~~l~~~gv~~~l~~~ 314 (386)
+..|...++.+++.-+.-.++.|++-......+. ..+. .. +..+..+. -+..++..|+++++.+.
T Consensus 189 ~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfgfigQI 268 (346)
T KOG4510|consen 189 DIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFGFIGQI 268 (346)
T ss_pred cCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhhhHHHH
Confidence 4567788788887777767777666311111110 0000 00 11122211 12234456888888888
Q ss_pred HHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhh
Q 016592 315 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 374 (386)
Q Consensus 315 ~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~ 374 (386)
...+.+++-.+...++..+..-+++.++.+++|+|.++++++.|+++++.........|.
T Consensus 269 llTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 269 LLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW 328 (346)
T ss_pred HHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence 777888887788889999999999999999999999999999999999988887765553
No 26
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.61 E-value=9.8e-16 Score=139.83 Aligned_cols=248 Identities=14% Similarity=0.161 Sum_probs=184.5
Q ss_pred HHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhc-cchHHHH
Q 016592 126 ILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPK-RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTH 202 (386)
Q Consensus 126 i~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-vsvs~~~ 202 (386)
+.-+.+.++.| ....+|+.||++-+.-=++.. .+.+. ++++. +|.....-.++...++++|+++++ ++.+...
T Consensus 20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~-skf~~~k~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHi 95 (330)
T KOG1583|consen 20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFT-SKFFTVKPKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLHI 95 (330)
T ss_pred HHHHHHHHhCCCCeeehHHHHHHHHHHhceeee-ccccccCCCCc---hhhhheehheeeeeeeeccceeeecccceEEE
Confidence 45566666665 458899999888766333321 11111 12222 345556667777889999999997 8999999
Q ss_pred HHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC---Cc--------------ccc--HHHHHHHHHHHHH
Q 016592 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---EL--------------SFN--WTGFISAMISNIS 263 (386)
Q Consensus 203 ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~---~~--------------~~~--~~G~~~~l~s~l~ 263 (386)
+.++..++.+++++++++|+|++.+|+.+++++.+|+++.... |. .+- ..|+.+..++.+.
T Consensus 96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~ 175 (330)
T KOG1583|consen 96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL 175 (330)
T ss_pred EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999976432 11 011 2688888888888
Q ss_pred HHHHHHHHHHhh----------------hccchhch------hhhHHHHhh---------hchHHHHHHHHHHHHHHHHH
Q 016592 264 FTYRSIYSKKAM----------------VEGPQLIK------HGLSDAISK---------VGMVKFISDLFWVGMFYHLY 312 (386)
Q Consensus 264 ~a~~~vl~k~~~----------------~~g~~l~~------~~~~~~~~~---------~~~~~~~~~l~~~gv~~~l~ 312 (386)
.|.-.++++... ..-|.+.. +.+..+... ...+..|.+++.+++..|++
T Consensus 176 sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~C 255 (330)
T KOG1583|consen 176 SAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFC 255 (330)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHH
Confidence 888888776554 11111111 011111111 11345678888899999888
Q ss_pred HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhhhH
Q 016592 313 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQME 377 (386)
Q Consensus 313 ~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~~~ 377 (386)
.-..|.+-.+++++|.++.-++++.++.++|+++|++++++..|+|+++++.|.++|+....+.+
T Consensus 256 ikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~ 320 (330)
T KOG1583|consen 256 IKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPK 320 (330)
T ss_pred HHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 88888899999999999999999999999999999999999999999999999999987654443
No 27
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.56 E-value=9.3e-12 Score=115.53 Aligned_cols=264 Identities=14% Similarity=0.133 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCCCCC-C--CCCHHHHHHHHHHHHHHHHH
Q 016592 110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGLPKR-A--PIDSKLLKLLIPVAVCHALG 185 (386)
Q Consensus 110 ~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~-~~~~~~-~--~~~~~~~~~~~~~~~~~~~~ 185 (386)
..++.+.-|+.+...-.+-|.+ +..| +..+...|.+.+..++.+... .+..+. . .-+++.+..+...+++-..+
T Consensus 8 Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~n 85 (293)
T COG2962 8 GILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLN 85 (293)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3444555556666667777875 4577 889999999998887654322 221111 1 11233455556666666778
Q ss_pred HHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCccccHHHHHHHHHHHHHHH
Q 016592 186 HVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFT 265 (386)
Q Consensus 186 ~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a 265 (386)
...+.+|.+.-.+-.++.-....|+++++++.+|+|||+++.|++++++..+||..-.....++.|..+.+ +++|+
T Consensus 86 W~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~ 161 (293)
T COG2962 86 WWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFG 161 (293)
T ss_pred HHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHH
Confidence 88888888888888889999999999999999999999999999999999999998877777788766555 57899
Q ss_pred HHHHHHHHhhhccc--------hhchhhhH--HHHh------hhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHH
Q 016592 266 YRSIYSKKAMVEGP--------QLIKHGLS--DAIS------KVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 329 (386)
Q Consensus 266 ~~~vl~k~~~~~g~--------~l~~~~~~--~~~~------~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~t~s 329 (386)
+|..+-|+..++.. .+.+.... ...+ ..+....+..+...|....+--......-++++=.+..
T Consensus 162 ~Ygl~RK~~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G 241 (293)
T COG2962 162 LYGLLRKKLKVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLG 241 (293)
T ss_pred HHHHHHHhcCCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHH
Confidence 99999888763321 11111110 0011 11122334555556654332222222567899999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhhhHHH
Q 016592 330 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEE 379 (386)
Q Consensus 330 v~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~~~~~ 379 (386)
+..++.|....+++++++||+++..+.+..+.+-.|..+|....-+..++
T Consensus 242 ~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~ 291 (293)
T COG2962 242 FLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK 291 (293)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999876554443
No 28
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.53 E-value=4.1e-13 Score=127.70 Aligned_cols=202 Identities=18% Similarity=0.209 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCc-----
Q 016592 173 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----- 247 (386)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~----- 247 (386)
+..+....+....++++|.|+.+++++..+++.++.-+|+..++.++.+||+++.|.+++++.+.|+++++.+|.
T Consensus 160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~ 239 (416)
T KOG2765|consen 160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD 239 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc
Confidence 344445556678999999999999999999999999999999999999999999999999999999999987742
Q ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHHHhh-hccch----hchh---------hhHHHH--h-----hhchHH--HHHH
Q 016592 248 ---SFNWTGFISAMISNISFTYRSIYSKKAM-VEGPQ----LIKH---------GLSDAI--S-----KVGMVK--FISD 301 (386)
Q Consensus 248 ---~~~~~G~~~~l~s~l~~a~~~vl~k~~~-~~g~~----l~~~---------~~~~~~--~-----~~~~~~--~~~~ 301 (386)
+-...|.++++++++.||.|.++.||.. .||.. ++.. .|+..+ . .+..+. -...
T Consensus 240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~ 319 (416)
T KOG2765|consen 240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSL 319 (416)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEe
Confidence 2347899999999999999999999875 33321 1110 011000 0 000000 0011
Q ss_pred HHHHHHHHH-HHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhh
Q 016592 302 LFWVGMFYH-LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 374 (386)
Q Consensus 302 l~~~gv~~~-l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~ 374 (386)
++..++.+. +--+...++.-.++|++..+...+..+++++...++-+.++|+..++|.+.+++|.+..++..+
T Consensus 320 vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 320 VVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred eeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 222222222 2222223567789999999999999999999999999999999999999999999999887543
No 29
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.51 E-value=2e-12 Score=118.52 Aligned_cols=248 Identities=18% Similarity=0.230 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHhh-------CCchHHHHHHHHHHHHHHHHHHHHhC----CCC------------CCCCCHHHHHHHHHH
Q 016592 122 VIFNILNKRIYNY-------FPYPYFVSVIHLLVGVVYCLVSWAVG----LPK------------RAPIDSKLLKLLIPV 178 (386)
Q Consensus 122 ~~~~i~nK~~l~~-------f~~P~~lt~~r~~~~~l~l~~~~~~~----~~~------------~~~~~~~~~~~~~~~ 178 (386)
....+..||.-+- |+.|+..+..-|+--.+.+.++...+ .+. ++|++ -+.+++.
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~---p~lfl~P 92 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN---PVLFLPP 92 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC---cceecCh
Confidence 3334778887551 66788777554443333332322211 110 11222 2456678
Q ss_pred HHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC----------cc
Q 016592 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----------LS 248 (386)
Q Consensus 179 ~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~----------~~ 248 (386)
++|...+..+.|.++.+++++.+|+++....+|+.+++..++++++...+|+++..++.|++++...| .+
T Consensus 93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s 172 (372)
T KOG3912|consen 93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYS 172 (372)
T ss_pred HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999875443 23
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhh------------hccch------hc--------------------hhhhHHHH
Q 016592 249 FNWTGFISAMISNISFTYRSIYSKKAM------------VEGPQ------LI--------------------KHGLSDAI 290 (386)
Q Consensus 249 ~~~~G~~~~l~s~l~~a~~~vl~k~~~------------~~g~~------l~--------------------~~~~~~~~ 290 (386)
.-..|.++.+++-+.-|.+.++.+|.. .||.. ++ ...+.+++
T Consensus 173 ~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~ 252 (372)
T KOG3912|consen 173 SIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAF 252 (372)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHH
Confidence 346899999999999999999988876 11100 00 00111222
Q ss_pred hhhchHHHHHHHHHHH--HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016592 291 SKVGMVKFISDLFWVG--MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 368 (386)
Q Consensus 291 ~~~~~~~~~~~l~~~g--v~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~l 368 (386)
..++..... .+...+ +.--++|+......+..|++|-.+...++..+..++++....|.+...|+.|.++.+.|+++
T Consensus 253 ~~~~e~p~l-~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~l 331 (372)
T KOG3912|consen 253 AALQESPSL-AVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIIL 331 (372)
T ss_pred HHhcCCchh-HHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222211111 111222 22235677777888999999999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q 016592 369 YSYIK 373 (386)
Q Consensus 369 y~~~~ 373 (386)
|+...
T Consensus 332 Y~~il 336 (372)
T KOG3912|consen 332 YNQIL 336 (372)
T ss_pred HHHHH
Confidence 98653
No 30
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.48 E-value=4.3e-13 Score=115.85 Aligned_cols=119 Identities=31% Similarity=0.418 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc----ch-----hchh----------------hhHH----HHh----hhc-hHHH
Q 016592 253 GFISAMISNISFTYRSIYSKKAMVEG----PQ-----LIKH----------------GLSD----AIS----KVG-MVKF 298 (386)
Q Consensus 253 G~~~~l~s~l~~a~~~vl~k~~~~~g----~~-----l~~~----------------~~~~----~~~----~~~-~~~~ 298 (386)
|++++++|+++.++++++.|+.+.+. .. +... +... ... ... ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999999887331 11 1100 0000 000 011 3355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHH
Q 016592 299 ISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 371 (386)
Q Consensus 299 ~~~l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~ 371 (386)
+..++.+|++++++|+..+.+++++||+++++.+++|++..+++|+++|||++|+.+++|+++++.|+++|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 6678888999999999999999999999999999999999999999999999999999999999999999975
No 31
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.45 E-value=5.8e-12 Score=117.42 Aligned_cols=190 Identities=18% Similarity=0.200 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCc-
Q 016592 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL- 247 (386)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~- 247 (386)
+++...+...++++++.+.+.+.++.+++++.+|+++.+..+++++++++++|+|.+..||+++++.++|+++....+.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 3445566677999999999999999999999999999999999999999999999999999999999999998743321
Q ss_pred ----------------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccc-hhchhhhH-----H---H----Hh------h
Q 016592 248 ----------------SFNWTGFISAMISNISFTYRSIYSKKAMVEGP-QLIKHGLS-----D---A----IS------K 292 (386)
Q Consensus 248 ----------------~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~-~l~~~~~~-----~---~----~~------~ 292 (386)
.....|++..+++.++.++..++.+|.+.+.. .++....+ . . .. .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~ 173 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISE 173 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 11258999999999999999999999873321 11111100 0 0 00 0
Q ss_pred hch----H-HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHH
Q 016592 293 VGM----V-KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 362 (386)
Q Consensus 293 ~~~----~-~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~li 362 (386)
.+. . ..|..++..++.+.+. -..+|+.+...-.....+..+++.++++++||.++|....+|+.++
T Consensus 174 ~g~f~G~~~~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 174 SGFFHGYSWWVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred CCchhhcchHHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 000 0 0112222222222222 2578999999999999999999999999999999999999998753
No 32
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.37 E-value=3.6e-10 Score=107.84 Aligned_cols=202 Identities=14% Similarity=0.166 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC----
Q 016592 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---- 246 (386)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~---- 246 (386)
+..++...+++|++.+.+.+.++.+.+++++++...+..+.|+++..+++++|.++.||.++++.+.|+++.....
T Consensus 91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~ 170 (345)
T KOG2234|consen 91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT 170 (345)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 3445556688999999999999999999999999999999999999999999999999999999999999886221
Q ss_pred -------ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccc-hhchhhhH------------HHHhh------h----chH
Q 016592 247 -------LSFNWTGFISAMISNISFTYRSIYSKKAMVEGP-QLIKHGLS------------DAISK------V----GMV 296 (386)
Q Consensus 247 -------~~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~-~l~~~~~~------------~~~~~------~----~~~ 296 (386)
....+.|+...+.++++-++..+|.+|.+.++. ..+....+ ....+ . +..
T Consensus 171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s 250 (345)
T KOG2234|consen 171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYS 250 (345)
T ss_pred CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccc
Confidence 123478999999999999999999999883321 11111100 00000 0 011
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhh
Q 016592 297 -KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 375 (386)
Q Consensus 297 -~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~ 375 (386)
..|..++..++-+.+.. ..+++.+-..-.....+..+++.+.|+.+||-++|....+|+.+++..+.+|+..+.+
T Consensus 251 ~~vw~vVl~~a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 251 SIVWLVVLLNAVGGLLVS----LVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred HHHHHHHHHHhccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 12233333333333333 3567777777777777888999999999999999999999999999999999976655
Q ss_pred h
Q 016592 376 M 376 (386)
Q Consensus 376 ~ 376 (386)
.
T Consensus 327 ~ 327 (345)
T KOG2234|consen 327 D 327 (345)
T ss_pred c
Confidence 4
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.26 E-value=5.2e-11 Score=98.37 Aligned_cols=120 Identities=17% Similarity=0.317 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHhhhhccchH
Q 016592 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVS 199 (386)
Q Consensus 122 ~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~vsvs 199 (386)
....+++|+..++++ |...+++|+..+.+ +.++ ...+..+....+.+++......+.+ ..++..+.+.++++++++
T Consensus 4 a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 81 (126)
T PF00892_consen 4 AIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISAS 81 (126)
T ss_pred eeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchh
Confidence 345678899999988 99999999999987 4433 2222222244556666667777776 578999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcc
Q 016592 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (386)
Q Consensus 200 ~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~ 243 (386)
..+++..++|+++.+++++++||++++.++.+++++++|+++..
T Consensus 82 ~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 82 IVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998753
No 34
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.08 E-value=1.4e-09 Score=88.84 Aligned_cols=125 Identities=21% Similarity=0.260 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 016592 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA--PIDSKLLKLLIPVAVCHALGHVTSNVSFAAV 196 (386)
Q Consensus 119 ~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~al~~v 196 (386)
++....-++.|..+++.+ |.+-++.|-.+...++........+... ..+++.|..++..|+...++..+++.+++.-
T Consensus 13 ~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G 91 (140)
T COG2510 13 LFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKG 91 (140)
T ss_pred HHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcC
Confidence 333455689999999998 9999999999998877654443332222 3577778888888888889999999999999
Q ss_pred chHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 197 AVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 197 svs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
.+|-..-+-.+.|+++++++++++|||++..+|++++++++|+++++.
T Consensus 92 ~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 92 KASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred CcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999999988653
No 35
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.93 E-value=7.6e-09 Score=84.99 Aligned_cols=105 Identities=19% Similarity=0.330 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCC--CCCCHHHHHHHHHHHHHHH-HHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHH
Q 016592 143 VIHLLVGVVYCLVSWAV-GLPKR--APIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF 218 (386)
Q Consensus 143 ~~r~~~~~l~l~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l 218 (386)
.+|++++.+++...... +..++ ...+++.+..++..+++.. .+..+.++|+++.+ +...++.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 46888887766543322 22111 1122334445555566654 88999999999999 58889999999999999999
Q ss_pred HhCCcCChhhHHHHHHHHhhhhhcccCCcc
Q 016592 219 ILGQQLPLTLWLSLAPVVIGVSMASLTELS 248 (386)
Q Consensus 219 ~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~ 248 (386)
++|||++++++++++++++|+++...+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999998877653
No 36
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.90 E-value=3.8e-09 Score=97.19 Aligned_cols=174 Identities=18% Similarity=0.236 Sum_probs=122.3
Q ss_pred cchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC---------------------------cc
Q 016592 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---------------------------LS 248 (386)
Q Consensus 196 vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~---------------------------~~ 248 (386)
++++.....++..++++++..+.+.+++++..++++.++...|+......+ .+
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 578889999999999999999999999999999999999999987532211 02
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccchhc-hhhhH-------H-HH----------hhhch-HHHHHHHHHHHHH
Q 016592 249 FNWTGFISAMISNISFTYRSIYSKKAMVEGPQLI-KHGLS-------D-AI----------SKVGM-VKFISDLFWVGMF 308 (386)
Q Consensus 249 ~~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~-~~~~~-------~-~~----------~~~~~-~~~~~~l~~~gv~ 308 (386)
..+.|....+.+.++.++..++.++...+..... .+..+ . .. ...+. ..+....+...+.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL 161 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence 3367888888888888888888887653221110 00000 0 00 00000 0000011112222
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016592 309 YHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 369 (386)
Q Consensus 309 ~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly 369 (386)
....+.+....+++.++.+.++...++++++.++|+++|||+++..+++|+.+++.|+++|
T Consensus 162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 2223333456899999999999999999999999999999999999999999999998775
No 37
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.81 E-value=5.3e-07 Score=84.42 Aligned_cols=200 Identities=19% Similarity=0.176 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHH-hhhHHHHHHHHHHHhCCcCChhhHH----HHHHHHhhhhhcc
Q 016592 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWL----SLAPVVIGVSMAS 243 (386)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~-s~~Pvf~~lls~l~l~ek~s~~~~l----sl~l~v~Gv~l~~ 243 (386)
.+.+..-+..|++..+++...+.|++++++|.+--+. .+.-+.+.+.++++++|-.+..+++ +++++++|+++.+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 3667777888999999999999999999999877666 6667779999999999977766654 8899999999987
Q ss_pred cCCccc--------cHHHHHHHHHHHHHHHHHHHHHHHhhhccchhchhh-hHHHHhh----h--c---hHHHHHHHHHH
Q 016592 244 LTELSF--------NWTGFISAMISNISFTYRSIYSKKAMVEGPQLIKHG-LSDAISK----V--G---MVKFISDLFWV 305 (386)
Q Consensus 244 ~~~~~~--------~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~~-~~~~~~~----~--~---~~~~~~~l~~~ 305 (386)
..|.+. ...|+...+++.+.|..|.++.|-...++...+.+. .-..+.. . . .......-...
T Consensus 122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~ 201 (269)
T PF06800_consen 122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAFHVSGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILT 201 (269)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCChhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHH
Confidence 765321 246999999999999999999988776665543321 1111100 0 0 00111223445
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchh----hhHhHHHHHHHHHH
Q 016592 306 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQ----TGIGTVIAIAGVAA 368 (386)
Q Consensus 306 gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~----~~~G~~lii~Gv~l 368 (386)
|++.-.-|...+...++.+..+.=....+..+++.+.++++++|.=+.. .++|.++++.|..+
T Consensus 202 G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 202 GLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 6665566666667778888888888888999999999999999986655 56788888877654
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.76 E-value=2.2e-08 Score=87.86 Aligned_cols=203 Identities=13% Similarity=0.075 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC--cc
Q 016592 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--LS 248 (386)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~--~~ 248 (386)
.+++..|.+++..+.++.+..+++.++.+.++.+.++.--|+.+++++.+|+++.-.++++.++.+.|+++.++.| ..
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 3455567778888999999999999999999999999999999999999999999999999999999999988765 34
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccchhch-hh--------hHHH---HhhhchHHH-----HHHHHHHH
Q 016592 249 FNWTGFISAMISNISFTYRSIYSKKAMV-----EGPQLIK-HG--------LSDA---ISKVGMVKF-----ISDLFWVG 306 (386)
Q Consensus 249 ~~~~G~~~~l~s~l~~a~~~vl~k~~~~-----~g~~l~~-~~--------~~~~---~~~~~~~~~-----~~~l~~~g 306 (386)
.++.|+.+++.|+...++|.+..|+..- +..+++. .+ ++.. +..+...+- |.-+...+
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG~l~G~A 211 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWGCLCGAA 211 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCchhhhhHH
Confidence 5689999999999999999999999861 1111110 00 1111 111111110 11122222
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHh
Q 016592 307 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 373 (386)
Q Consensus 307 v~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~ 373 (386)
.....+|+.....+..+.|...|+...+.........+++-+-..+...+.|..+++.|..+.-..+
T Consensus 212 ~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 212 GLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred HHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 2233334333345677888888888888777888888876666789999999999999988765443
No 39
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.72 E-value=9.5e-07 Score=82.75 Aligned_cols=129 Identities=19% Similarity=0.069 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHH
Q 016592 110 TGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHV 187 (386)
Q Consensus 110 ~~~~~~~w~~~~~~~~i~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 187 (386)
...+.++-.++....+++.|+..++.+ .+..+..+++.++.+++.+......+. ...+.+.+..++..+++ ..++..
T Consensus 129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 207 (260)
T TIGR00950 129 GLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYF 207 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHH
Confidence 334444444555666788999887665 234555578888887766554332222 23355555555556665 467889
Q ss_pred HHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhh
Q 016592 188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239 (386)
Q Consensus 188 ~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv 239 (386)
+.+.++++.+++.+.++.+++|++.+++++++++|+++..++.+.++++.|+
T Consensus 208 ~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 208 LWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999986
No 40
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.71 E-value=9.2e-10 Score=100.01 Aligned_cols=244 Identities=8% Similarity=0.038 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHhh-CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 016592 121 NVIFNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (386)
Q Consensus 121 ~~~~~i~nK~~l~~-f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs 199 (386)
....++.+.++-.. .+-|.+-+++....-+++--.+...+. +.-+-.|+..+++++...-++++...|.||++..
T Consensus 30 ~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmt 105 (336)
T KOG2766|consen 30 ITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMT 105 (336)
T ss_pred HHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchH
Confidence 34445566666554 677888888876655444333322222 2223356667777888777888888999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCc--------cccHHHHHHHHHHHHHHHHHHHHH
Q 016592 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNISFTYRSIYS 271 (386)
Q Consensus 200 ~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~--------~~~~~G~~~~l~s~l~~a~~~vl~ 271 (386)
..+.+-+-..+.+++++|+|+|.|+++.++.+++++++|++++...|. +....|+++.++++-+||..|+..
T Consensus 106 Si~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~E 185 (336)
T KOG2766|consen 106 SIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSE 185 (336)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccH
Confidence 999999999999999999999999999999999999999998765442 233589999999999999999876
Q ss_pred HHhhhccch-----hc--h----hhhHHHHhh-----hchH-HHHHHHHHHHHHHH-HHHHHHHHHhhccchHHHHHHHH
Q 016592 272 KKAMVEGPQ-----LI--K----HGLSDAISK-----VGMV-KFISDLFWVGMFYH-LYNQLATNTLERVAPLTHAVGNV 333 (386)
Q Consensus 272 k~~~~~g~~-----l~--~----~~~~~~~~~-----~~~~-~~~~~l~~~gv~~~-l~~~~~~~~l~~~s~~t~sv~~~ 333 (386)
+-+-...+. ++ . .+.|...+. .++. ....++. ..++-+ +|... =.+++..|++.+++.-.
T Consensus 186 Eflvkn~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~~~i~~yl~-f~L~MFllYsl~-pil~k~~~aT~~nlslL 263 (336)
T KOG2766|consen 186 EFLVKNADRVELMGFLGLFGAIISAIQFIFERHHVSTLHWDSAIFLYLR-FALTMFLLYSLA-PILIKTNSATMFNLSLL 263 (336)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHhhhccceeeEeehHHHHHHHH-HHHHHHHHHHhh-HHheecCCceEEEhhHh
Confidence 544311111 10 0 011100110 1111 1111111 222222 22222 23578888888877777
Q ss_pred HHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHH
Q 016592 334 LKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 372 (386)
Q Consensus 334 l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~ 372 (386)
....++++. ..||-+++|.-.+..+.+..|.++|+..
T Consensus 264 TsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 264 TSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred HHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence 777787777 6788889999999999999999999643
No 41
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.49 E-value=7e-06 Score=80.97 Aligned_cols=126 Identities=13% Similarity=0.131 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-CCC-CC---CCCCHHHHHHHHHHHHHHHHHHHHHHhh
Q 016592 118 YFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GLP-KR---APIDSKLLKLLIPVAVCHALGHVTSNVS 192 (386)
Q Consensus 118 ~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a 192 (386)
.+++...+++.|.....+|.+...+++++.++.+.+.+.... ... .. ...+...+ .++..+++-.+..++.+++
T Consensus 198 a~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~i~y~~i~t~lay~lw~~~ 276 (358)
T PLN00411 198 GIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLI-TIVTMAIITSVYYVIHSWT 276 (358)
T ss_pred HHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHH-HHHHHHHHHHHHHHHHHHH
Confidence 334455667888887788756777888888877655432221 111 10 11222222 2333344444677789999
Q ss_pred hhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 193 FAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 193 l~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
+++++++.+.+...++|++.+++++++++|+++..+++|.++++.|+.++..
T Consensus 277 v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 277 VRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW 328 (358)
T ss_pred HhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998764
No 42
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.42 E-value=1.6e-05 Score=76.20 Aligned_cols=130 Identities=20% Similarity=0.209 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHH
Q 016592 112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSN 190 (386)
Q Consensus 112 ~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 190 (386)
++.++-.++....+++.|+..++.+ |..++ +..+++.+.+.+....... ....+...+...+..+++ ..+++.+.+
T Consensus 151 ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~ 227 (293)
T PRK10532 151 ALALGAGACWAIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEM 227 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444556677888766655 66654 4445555444433322211 122344444444455555 457888999
Q ss_pred hhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 191 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 191 ~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
.++++++++.++++..++|++..++++++++|+++..++++.+++++|++....
T Consensus 228 ~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 228 IALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999987643
No 43
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.39 E-value=1.3e-05 Score=77.06 Aligned_cols=128 Identities=15% Similarity=0.192 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 016592 112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSN 190 (386)
Q Consensus 112 ~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (386)
.+.++-.++....++++|+.-++.+ |.... . ..+.+.+.+ ......+ ....+.+.+..++..++...++..+.+
T Consensus 159 ~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~--~-~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~t~~~~~l~~ 233 (295)
T PRK11689 159 GLAFIGAFIWAAYCNVTRKYARGKN-GITLF--F-ILTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAAAMGFGYAAWN 233 (295)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCC-chhHH--H-HHHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455566778888765544 55432 2 222332222 2222211 123455556555666666667899999
Q ss_pred hhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 191 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 191 ~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
.++++.+++.++++.+++|++.+++++++++|+++..++++.+++++|+.+...
T Consensus 234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999999999999999987643
No 44
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.36 E-value=1.9e-05 Score=75.67 Aligned_cols=128 Identities=16% Similarity=0.117 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHhhhh
Q 016592 117 WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFA 194 (386)
Q Consensus 117 w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~ 194 (386)
-.++.....+.+|+.-. +++...+.+++.++.+.+.+.... ........+.+.+..++..+++ ..++..+.+.+++
T Consensus 158 a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~ 235 (292)
T PRK11272 158 ASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLR 235 (292)
T ss_pred HHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344445566777532 235667778888887765544322 2211111244556566666665 4578889999999
Q ss_pred ccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC
Q 016592 195 AVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (386)
Q Consensus 195 ~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~ 246 (386)
+++++...++..++|++.++++++++||+++..+++|.++++.|+.+....+
T Consensus 236 ~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 236 NVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998876543
No 45
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.34 E-value=1.9e-05 Score=64.62 Aligned_cols=65 Identities=15% Similarity=0.228 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 180 ~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
+++.+..++...++++++.+.+..+-++.++++++++++++||+++..+++++.++++|+++...
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 45677888999999999999999999999999999999999999999999999999999987653
No 46
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.19 E-value=3.6e-05 Score=64.63 Aligned_cols=118 Identities=16% Similarity=0.122 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccchhchhhhHH--HHhhhchHHHHHHHHHHHHHHHHHHHHH-HHHhhccchHHH
Q 016592 252 TGFISAMISNISFTYRSIYSKKAMVEGPQLIKHGLSD--AISKVGMVKFISDLFWVGMFYHLYNQLA-TNTLERVAPLTH 328 (386)
Q Consensus 252 ~G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~~~~~--~~~~~~~~~~~~~l~~~gv~~~l~~~~~-~~~l~~~s~~t~ 328 (386)
.|+++.+++.++.+..+++.|+-+.+-+.... .... .......+ ...++.|+..+...+.. ..++++.+....
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~-~~~~~~~~~~~~~p---~~~i~lgl~~~~la~~~w~~aL~~~~ls~A 77 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSH-AWDFIAALLAFGLA---LRAVLLGLAGYALSMLCWLKALRYLPLSRA 77 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccc-hhHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 47899999999999999999988633221110 0000 00001111 01233333333333322 257888888888
Q ss_pred HHHHHHHHHHHHHHHHH--HhCCccchhhhHhHHHHHHHHHHHHHHh
Q 016592 329 AVGNVLKRVFVIGFSIL--AFGNKISTQTGIGTVIAIAGVAAYSYIK 373 (386)
Q Consensus 329 sv~~~l~~v~~il~s~l--~fge~lt~~~~~G~~lii~Gv~ly~~~~ 373 (386)
...-.+..+...+.++. +|||++|+.+++|++++++|+++.++.+
T Consensus 78 yp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 78 YPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 77777777777777775 8999999999999999999999987543
No 47
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.19 E-value=4.9e-06 Score=68.37 Aligned_cols=118 Identities=19% Similarity=0.109 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhchhhhH------------HHHhhh-----chHHHHHHHHHHHHHHHHHHHH
Q 016592 253 GFISAMISNISFTYRSIYSKKAMVEGPQLIKHGLS------------DAISKV-----GMVKFISDLFWVGMFYHLYNQL 315 (386)
Q Consensus 253 G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~~~~------------~~~~~~-----~~~~~~~~l~~~gv~~~l~~~~ 315 (386)
-.++++++++.+++..++.|.-...-...+..... .....+ -.+..|..+.++|+.+-+-.+.
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~ 83 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLL 83 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHH
Confidence 36889999999999999999875211111110000 000011 1223466788888877766677
Q ss_pred HHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHH
Q 016592 316 ATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 370 (386)
Q Consensus 316 ~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~ 370 (386)
.|++++.-.+....-..-..+++++++|++++||++|..+++|++++..|+.+.+
T Consensus 84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 7888888877777777778999999999999999999999999999999987654
No 48
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.16 E-value=2.9e-05 Score=74.66 Aligned_cols=62 Identities=24% Similarity=0.386 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhc
Q 016592 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (386)
Q Consensus 181 ~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~ 242 (386)
.+.++......|+.+.|.+..+-+.+..-++.++++.+++|||++++.+.|.++++.|+.+.
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence 45678889999999999999999999999999999999999999999999999999999865
No 49
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.15 E-value=0.00016 Score=69.60 Aligned_cols=134 Identities=16% Similarity=0.168 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCch--HHHHHHHHHHHHHHHHHH-HHhCCCC-----CCCCCHHHHHHHHHHHHH-H
Q 016592 112 FFFFMWYFLNVIFNILNKRIYNYFPYP--YFVSVIHLLVGVVYCLVS-WAVGLPK-----RAPIDSKLLKLLIPVAVC-H 182 (386)
Q Consensus 112 ~~~~~w~~~~~~~~i~nK~~l~~f~~P--~~lt~~r~~~~~l~l~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~-~ 182 (386)
.+.++-.++....++++|+..++.+.| .....+.++.+.+.+... .....+. ....+.+.+..++-.+++ .
T Consensus 146 ~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t 225 (299)
T PRK11453 146 MLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVAT 225 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHH
Confidence 344444444556667788876554433 344455555554433322 2222111 123455556666666655 4
Q ss_pred HHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC
Q 016592 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (386)
Q Consensus 183 ~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~ 245 (386)
.++..+.+.++++.+.+.+..+..++|++..++++++++|+++..+++|.+++++|+.+...+
T Consensus 226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 478889999999999999999999999999999999999999999999999999999876543
No 50
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.13 E-value=1.6e-05 Score=75.84 Aligned_cols=71 Identities=11% Similarity=0.113 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhh
Q 016592 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (386)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l 241 (386)
.+......++...+++.+.+.++++.+++......+++|++..+++++++||+++..+++|.+++++|+.+
T Consensus 210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 34344444555668899999999999999999999999999999999999999999999999999999975
No 51
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.06 E-value=1.1e-05 Score=66.32 Aligned_cols=69 Identities=25% Similarity=0.315 Sum_probs=58.3
Q ss_pred HHHHHHH-HHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHH
Q 016592 302 LFWVGMF-YHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 370 (386)
Q Consensus 302 l~~~gv~-~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~ 370 (386)
....+++ ..+.+...+..+++.++...++...+.|+++.++++++++|++++.+++|+++++.|+.+.+
T Consensus 56 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 56 LLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3444444 34445555678999999999999999999999999999999999999999999999998764
No 52
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.06 E-value=0.00029 Score=60.39 Aligned_cols=131 Identities=13% Similarity=0.138 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh------CCchHHHHHHHHHHHHHHHHHHH-HhCCCCCC---------CC--CHHHHHH
Q 016592 113 FFFMWYFLNVIFNILNKRIYNY------FPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRA---------PI--DSKLLKL 174 (386)
Q Consensus 113 ~~~~w~~~~~~~~i~nK~~l~~------f~~P~~lt~~r~~~~~l~l~~~~-~~~~~~~~---------~~--~~~~~~~ 174 (386)
+.+..-++...-+++.|+.+++ -..|+.+..+.-..+.+.+.+.+ ..+.++.. +. +.+.+..
T Consensus 4 ~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (153)
T PF03151_consen 4 LALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFL 83 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHH
Confidence 3344444555666777887776 22577777777777766665543 22222200 01 2344556
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcc
Q 016592 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (386)
Q Consensus 175 ~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~ 243 (386)
++..+++....++..+..++++++-..+++.....+.+.++++++++|+++..++.|+++.++|+.+.+
T Consensus 84 ~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 84 LILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 666677788889999999999999999999999999999999999999999999999999999998754
No 53
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.04 E-value=6.9e-05 Score=72.09 Aligned_cols=134 Identities=10% Similarity=0.034 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHH-hCCCCCCC---------CCHH-HHHHHH
Q 016592 110 TGFFFFMWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRAP---------IDSK-LLKLLI 176 (386)
Q Consensus 110 ~~~~~~~w~~~~~~~~i~nK~~l~--~f~~P~~lt~~r~~~~~l~l~~~~~-~~~~~~~~---------~~~~-~~~~~~ 176 (386)
...++++..++.....++.|+..+ +.+ |+.++.+++..+.+++.+... ...+.... .... .+...+
T Consensus 146 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
T TIGR00817 146 GFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL 224 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence 444555555555666788888877 455 888999999888877665433 22111000 0000 111111
Q ss_pred HHHH-HHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 177 PVAV-CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 177 ~~~~-~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
..+. ++...+.+.+.+++++++..+++...++|++++++++++++|+++..+++|.++++.|+.+...
T Consensus 225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 2222 2333345666899999999999999999999999999999999999999999999999988754
No 54
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.01 E-value=0.00024 Score=68.23 Aligned_cols=70 Identities=10% Similarity=0.114 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcc
Q 016592 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (386)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~ 243 (386)
..+..++...+.+.+.+.++++.+.+..+.+.+.+|++..++++++++|+++..++.+.++++.|+.+..
T Consensus 215 ~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 215 LLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3444455666889999999999999999999999999999999999999999999999999988887654
No 55
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.88 E-value=0.00096 Score=62.79 Aligned_cols=130 Identities=26% Similarity=0.335 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH-HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHH
Q 016592 112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSV-IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTS 189 (386)
Q Consensus 112 ~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 189 (386)
.+.+.-.++....++.+|+.. +.+ +..... +++. ....+.......... .+.+...+..+...+++.. .++.+.
T Consensus 157 ~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (292)
T COG0697 157 LLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLL-LALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAYLLW 232 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHH-HHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334445667788776 333 444444 4444 222222222222111 3345556777777777766 589999
Q ss_pred HhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC
Q 016592 190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (386)
Q Consensus 190 ~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~ 245 (386)
+.+++..+++...++..++|++..++++++++|+++..++++.++++.|+.+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 233 YYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999877543
No 56
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.83 E-value=0.00081 Score=54.98 Aligned_cols=106 Identities=14% Similarity=0.054 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhchhhhHHHHhhhchHHHHHHHHHHHHHHH-HHHHHHHHHhhccchHHHHHH
Q 016592 253 GFISAMISNISFTYRSIYSKKAMVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYH-LYNQLATNTLERVAPLTHAVG 331 (386)
Q Consensus 253 G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~~~~~~~~~~~~~~~~~~l~~~gv~~~-l~~~~~~~~l~~~s~~t~sv~ 331 (386)
+.++.+++.++.+..++..|+..... +.+..+ . ....... .+++.+ +..+.....+++.+.......
T Consensus 2 ~~~~l~~ai~~ev~g~~~lK~s~~~~----~~~~~~----~---~~l~~~~-~~~~~~~l~~~~~~~al~~iplg~Ay~~ 69 (111)
T PRK15051 2 IWLTLVFASLLSVAGQLCQKQATRPV----AIGKRR----K---HIVLWLG-LALACLGLAMVLWLLVLQNVPVGIAYPM 69 (111)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccC----Ccchhh----h---HHHHHHH-HHHHHHHHHHHHHHHHHhhCChHHHHHH
Confidence 35677888999999999888753111 001000 0 0011111 111111 122222357788888888777
Q ss_pred HHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHH
Q 016592 332 NVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 370 (386)
Q Consensus 332 ~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~ 370 (386)
-.+.++.+.+.|+++|||++++.+++|+++++.|+.+..
T Consensus 70 ~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 70 LSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 779999999999999999999999999999999998754
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.83 E-value=0.00096 Score=65.72 Aligned_cols=136 Identities=13% Similarity=0.079 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCC------chHHHHHHHHHHHHHHHHHHHH-hCCCCC--------CCCCH---
Q 016592 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFP------YPYFVSVIHLLVGVVYCLVSWA-VGLPKR--------APIDS--- 169 (386)
Q Consensus 108 l~~~~~~~~w~~~~~~~~i~nK~~l~~f~------~P~~lt~~r~~~~~l~l~~~~~-~~~~~~--------~~~~~--- 169 (386)
+...++.++-.+++...+++.|+.+++.+ .+..+..+....+.++++++.. ...++. ...+.
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 33445555555566677788898887532 1444555566777766655432 211100 00111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcc
Q 016592 170 -KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (386)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~ 243 (386)
..+..++..++++.+.+.+.+.+++++++..+++...+.|+++.++++++++|+++..+++|.+++++|+.+.+
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 11122233344455555556679999999999999999999999999999999999999999999999998764
No 58
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.79 E-value=0.00057 Score=64.07 Aligned_cols=118 Identities=19% Similarity=0.251 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccchhchhhhHH--------H---H--------hhh---chHHHHHHHHHHHHHH
Q 016592 252 TGFISAMISNISFTYRSIYSKKAMVEGPQLIKHGLSD--------A---I--------SKV---GMVKFISDLFWVGMFY 309 (386)
Q Consensus 252 ~G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~~~~~--------~---~--------~~~---~~~~~~~~l~~~gv~~ 309 (386)
.|.++.++++++|+...+..|... +-+......+.. . . ... .....+..+...|++.
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 80 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLLK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI 80 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 378899999999999999999732 111111000000 0 0 000 0111223345556655
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHH
Q 016592 310 HLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 370 (386)
Q Consensus 310 ~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~ 370 (386)
...+...+..++++++.+.++.....|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 5566666788999999999999999999999999999999999999999999999998653
No 59
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.77 E-value=0.00046 Score=66.14 Aligned_cols=115 Identities=13% Similarity=0.198 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHH---HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhh-ccc
Q 016592 122 VIFNILNKRIYNYFPYPYFVSVIHLL---VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFA-AVA 197 (386)
Q Consensus 122 ~~~~i~nK~~l~~f~~P~~lt~~r~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~-~vs 197 (386)
....+.+|.. +.+ |+..++.++. +++++...... +. .+.+.+.....+..|+++.+++.++..+.+ +.+
T Consensus 165 ~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~ 237 (290)
T TIGR00776 165 LVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGHI---LA-KPLKKYAILLNILPGLMWGIGNFFYLFSAQPKVG 237 (290)
T ss_pred HHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHHh---cc-cchHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 3445677765 244 7777555544 33332222221 11 222333344455588888889999999999 999
Q ss_pred hHHHHHHHhhhHHHHHHHHHHHhCCcCChhhH----HHHHHHHhhhhhcc
Q 016592 198 VSFTHTIKALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMAS 243 (386)
Q Consensus 198 vs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~----lsl~l~v~Gv~l~~ 243 (386)
++.+.++.+.+|+...+.+.+++||+.+++++ ++.++++.|+.+..
T Consensus 238 ~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 238 VATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999998754
No 60
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.75 E-value=0.013 Score=57.17 Aligned_cols=259 Identities=13% Similarity=0.120 Sum_probs=153.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCch--HHHHHHHHHHHHHHHHH-HHHhCCCC----CCCCCHHHHHHHHHHHH
Q 016592 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYP--YFVSVIHLLVGVVYCLV-SWAVGLPK----RAPIDSKLLKLLIPVAV 180 (386)
Q Consensus 108 l~~~~~~~~w~~~~~~~~i~nK~~l~~f~~P--~~lt~~r~~~~~l~l~~-~~~~~~~~----~~~~~~~~~~~~~~~~~ 180 (386)
....++|++-.+++.+...-.|+ .+++++- |. ...++..+++.. .-....+. ....+.+.+..-+..|+
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE~~W~---v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VKKWSWETMWS---VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cCCCchhHHHH---HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 44566777777777777777777 4544411 22 112233332221 11111110 01234556667778899
Q ss_pred HHHHHHHHHHhhhhccchHHHHHH-HhhhHHHHHHHHHHHhCCcC---C----hhhHHHHHHHHhhhhhccc----CCc-
Q 016592 181 CHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQL---P----LTLWLSLAPVVIGVSMASL----TEL- 247 (386)
Q Consensus 181 ~~~~~~~~~~~al~~vsvs~~~ii-~s~~Pvf~~lls~l~l~ek~---s----~~~~lsl~l~v~Gv~l~~~----~~~- 247 (386)
+..+++.....++++++++.+.-+ ..+.-++..++..++++|-. + ..-.++++++++|+++.+. .|.
T Consensus 82 ~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~ 161 (345)
T PRK13499 82 LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERK 161 (345)
T ss_pred HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 999999999999999999997754 47778889999999988643 2 3467788899999998876 332
Q ss_pred -------ccc-HHHHHHHHHHHHHHHHHH-------HHHHHhh---hccc-----hhc---hhhh-HHH---H----h--
Q 016592 248 -------SFN-WTGFISAMISNISFTYRS-------IYSKKAM---VEGP-----QLI---KHGL-SDA---I----S-- 291 (386)
Q Consensus 248 -------~~~-~~G~~~~l~s~l~~a~~~-------vl~k~~~---~~g~-----~l~---~~~~-~~~---~----~-- 291 (386)
++| ..|++.++++.+.++.|+ ...+... .+++ +.. ..+. ... . .
T Consensus 162 ~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~ 241 (345)
T PRK13499 162 MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNK 241 (345)
T ss_pred cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 233 479999999999999999 4433311 1221 111 0000 000 0 0
Q ss_pred hh----ch----HHHHHH---HHHHHHHHHHHHHHHHHHhhccchHH----HHHHHHHHHHHHHHHHHHHhCCccc----
Q 016592 292 KV----GM----VKFISD---LFWVGMFYHLYNQLATNTLERVAPLT----HAVGNVLKRVFVIGFSILAFGNKIS---- 352 (386)
Q Consensus 292 ~~----~~----~~~~~~---l~~~gv~~~l~~~~~~~~l~~~s~~t----~sv~~~l~~v~~il~s~l~fge~lt---- 352 (386)
.. +. ..++.. -.+.|+..++.+......-++.+... ..+...+.-+++.+.++ +++|.=+
T Consensus 242 ~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k 320 (345)
T PRK13499 242 DLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRR 320 (345)
T ss_pred CcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCcc
Confidence 00 00 001222 13334444444444444444553222 22444667788888898 4888755
Q ss_pred --hhhhHhHHHHHHHHHHHHH
Q 016592 353 --TQTGIGTVIAIAGVAAYSY 371 (386)
Q Consensus 353 --~~~~~G~~lii~Gv~ly~~ 371 (386)
...++|.++++.|..+..+
T Consensus 321 ~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 321 PVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred chhHHHHHHHHHHHHHHHHhh
Confidence 5678999999999887654
No 61
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.73 E-value=0.0018 Score=54.37 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHH--HhCCcCChhhHHHHHHHHhhhhhcccCC
Q 016592 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF--ILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (386)
Q Consensus 175 ~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l--~l~ek~s~~~~lsl~l~v~Gv~l~~~~~ 246 (386)
++..-+++.+..++.+.++++.+++.+..+.+..+.++.+.++. ++||+++..+++|++++++|+.+....+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 34444567888999999999999999999999999999888885 8999999999999999999999876543
No 62
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.62 E-value=0.00072 Score=55.90 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHHH-hhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC
Q 016592 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (386)
Q Consensus 175 ~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~-s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~ 245 (386)
.+...+++.+..++...++++++++.+..+- ...-+.+++.+++++||+++..+++++.++++|+.++...
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 3455667788889999999999999988874 6899999999999999999999999999999999987654
No 63
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.54 E-value=0.0011 Score=54.01 Aligned_cols=70 Identities=16% Similarity=0.192 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHhhhhccchHHHHHHH-hhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC
Q 016592 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (386)
Q Consensus 176 ~~~~~~~~~~~~~~~~al~~vsvs~~~ii~-s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~ 245 (386)
+..-+++.+...+...++++++++.+..+- ...-+.+.+.+++++||++++.+++++.++++|+++....
T Consensus 34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 344566777888889999999999988885 5789999999999999999999999999999999987654
No 64
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.53 E-value=0.00095 Score=54.56 Aligned_cols=71 Identities=18% Similarity=0.211 Sum_probs=55.4
Q ss_pred HHHHHHHHH-HHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHh
Q 016592 302 LFWVGMFYH-LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 373 (386)
Q Consensus 302 l~~~gv~~~-l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~ 373 (386)
..+.|++.. ..+...+..++..++ ..++...+.|+++.++++++|+|+++..+++|+++++.|+.+..+.+
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 333344333 333344467778885 67788889999999999999999999999999999999999987654
No 65
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.48 E-value=0.0017 Score=52.46 Aligned_cols=71 Identities=17% Similarity=0.131 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccchHHHHHHHh-hhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s-~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
..+...+++....++...+++++|++.+..+=. ..-+.+.+.+++++||++++.+++++.++++|++....
T Consensus 31 ~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 31 PSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 334445677788889999999999999776654 77899999999999999999999999999999997654
No 66
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.45 E-value=0.0042 Score=59.85 Aligned_cols=136 Identities=15% Similarity=0.272 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHh---CCC-CCCC---CCHHHHHHHHHHHHH
Q 016592 110 TGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAV---GLP-KRAP---IDSKLLKLLIPVAVC 181 (386)
Q Consensus 110 ~~~~~~~w~~~~~~~~i~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~~~---~~~-~~~~---~~~~~~~~~~~~~~~ 181 (386)
..+++++..++......++|+++++.+ .++...++..+.+.++..+.... +.. +..+ -.++.+..++..+++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 566677777777778889999988644 46777777777777665543222 111 1011 122345666777777
Q ss_pred HHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC
Q 016592 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (386)
Q Consensus 182 ~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~ 245 (386)
...++.+.+.-.+..+.-..+++..+--+++.+++.++++++++..+|.|+++++.|..+-...
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence 7788888888888999999999999999999999999999999999999999999999876543
No 67
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.41 E-value=0.0036 Score=50.88 Aligned_cols=69 Identities=16% Similarity=0.183 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHHH-hhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcc
Q 016592 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (386)
Q Consensus 175 ~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~-s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~ 243 (386)
.....+++.+...+...+++++|++.+..+- ...-+.+.+.+.+++||++++.+++++.++++|++...
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4444566777888999999999999977665 57789999999999999999999999999999998753
No 68
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.32 E-value=0.0019 Score=51.83 Aligned_cols=71 Identities=20% Similarity=0.227 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHH-HhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC
Q 016592 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (386)
Q Consensus 175 ~~~~~~~~~~~~~~~~~al~~vsvs~~~ii-~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~ 245 (386)
.+..-+++.....+.-.++++++++.+..+ ...-.+.+++.+++++||+.+..+++++.+++.|++.....
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 344456667788899999999999996654 56678999999999999999999999999999999876543
No 69
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.29 E-value=0.011 Score=48.11 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=71.2
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhccchhchhhhHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccch-H
Q 016592 248 SFNWTGFISAMISNISFTYRSIYSKKAMVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAP-L 326 (386)
Q Consensus 248 ~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~~~~~~~~~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~-~ 326 (386)
++|....++.+++.++....+...|+.. |.. ........+...++..++.. .++++.+. +
T Consensus 3 ~~~~~~~~~L~~Ai~~Ev~~t~~Lk~s~--gf~-------------~~~~~~~~~~~~~~sf~~Ls----~al~~lpvgv 63 (109)
T PRK10650 3 QFEWIHAAWLALAIVLEIVANIFLKFSD--GFR-------------RKIYGILSLAAVLAAFSALS----QAVKGIDLSV 63 (109)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhc--CCc-------------chHHHHHHHHHHHHHHHHHH----HHHhhCchHH
Confidence 3566778888899999998888887651 110 00011111222233333333 45566654 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHH
Q 016592 327 THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 370 (386)
Q Consensus 327 t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~ 370 (386)
.+++..-+-.+.+.+.++++|||++++.+++|+.+++.|+...+
T Consensus 64 AYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 64 AYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 45677778888999999999999999999999999999998754
No 70
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.27 E-value=0.0095 Score=54.96 Aligned_cols=129 Identities=22% Similarity=0.186 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHH
Q 016592 110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVT 188 (386)
Q Consensus 110 ~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 188 (386)
...|.+.-..++..+++..|.+-..-+.+-. ...-+.+++++.+++-..... ..-++.+.+..-+..+++. ++-..+
T Consensus 149 Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g-~a~gm~vAaviv~Pig~~~ag-~~l~~p~ll~laLgvavlSSalPYsL 226 (292)
T COG5006 149 GVALALGAGACWALYIVLGQRAGRAEHGTAG-VAVGMLVAALIVLPIGAAQAG-PALFSPSLLPLALGVAVLSSALPYSL 226 (292)
T ss_pred HHHHHHHHhHHHHHHHHHcchhcccCCCchH-HHHHHHHHHHHHhhhhhhhcc-hhhcChHHHHHHHHHHHHhcccchHH
Confidence 3444444455556677777877654443333 345677777766554332211 1223444444444455553 366778
Q ss_pred HHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhh
Q 016592 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 240 (386)
Q Consensus 189 ~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~ 240 (386)
.+.++...+...+.++.+++|.+.++.++++++|.++..||+++..++.+.+
T Consensus 227 EmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 227 EMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999988776
No 71
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.24 E-value=0.0054 Score=50.73 Aligned_cols=102 Identities=19% Similarity=0.170 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhchhhhHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchH-HHHHH
Q 016592 253 GFISAMISNISFTYRSIYSKKAMVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPL-THAVG 331 (386)
Q Consensus 253 G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~~~~~~~~~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~-t~sv~ 331 (386)
+.++.+++.++....+...|... +.. ....+...+...++..+++. .++++.+.. .+++.
T Consensus 3 ~wl~L~~Ai~~Ev~~t~~LK~s~--g~~-------------~~~~~~~~i~~~~~sf~~ls----~al~~lplsiAYavw 63 (120)
T PRK10452 3 YWILLALAIATEITGTLSMKWAS--VSE-------------GNGGFILMLVMISLSYIFLS----FAVKKIALGVAYALW 63 (120)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhc--cCC-------------CcHHHHHHHHHHHHHHHHHH----HHHhhCCchhHHHHH
Confidence 34667778888888877777542 100 11111222333333333333 455665443 34555
Q ss_pred HHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHh
Q 016592 332 NVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 373 (386)
Q Consensus 332 ~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~ 373 (386)
.-+--+.+.+.++++|||++|+.+++|+.+++.|+...+...
T Consensus 64 ~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 64 EGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 567788899999999999999999999999999999887654
No 72
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.14 E-value=0.015 Score=47.38 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhchhhhHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchH-HHHHH
Q 016592 253 GFISAMISNISFTYRSIYSKKAMVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPL-THAVG 331 (386)
Q Consensus 253 G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~~~~~~~~~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~-t~sv~ 331 (386)
+.++.+++.++....++..|... |.. ........+...++..+++. .++++.+.. .+++.
T Consensus 3 ~wl~L~~a~~~Ev~~~~~lK~s~--gf~-------------~~~~~i~~~~~~~~sf~~l~----~al~~ipl~iAYavw 63 (110)
T PRK09541 3 PYIYLGGAILAEVIGTTLMKFSE--GFT-------------RLWPSVGTIICYCASFWLLA----QTLAYIPTGIAYAIW 63 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCC-------------chhHHHHHHHHHHHHHHHHH----HHHhhCCchhHHHHH
Confidence 34667788888888888777652 110 00011112222233333332 456666543 34565
Q ss_pred HHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHh
Q 016592 332 NVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 373 (386)
Q Consensus 332 ~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~ 373 (386)
.-+-.+.+++.++++|||++++.+++|+.+++.|+.+.+...
T Consensus 64 ~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 64 SGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 667888999999999999999999999999999999987543
No 73
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.06 E-value=0.017 Score=54.48 Aligned_cols=73 Identities=21% Similarity=0.237 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHH----HHHHHHhhhh
Q 016592 167 IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWL----SLAPVVIGVS 240 (386)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~l----sl~l~v~Gv~ 240 (386)
.+++.++ -+..|+++..++++...|.+.++++.+-.+..+.++...+-+.+++||+-+++++. +++++++|.+
T Consensus 191 ~~k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 191 FEKKSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred cccchHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 3444444 45569999999999999999999999999999999999999999999988877664 4444445544
No 74
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.02 E-value=0.013 Score=55.20 Aligned_cols=122 Identities=14% Similarity=0.172 Sum_probs=84.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhh-hccchhchh-----------------hhHHHHhhhchHHHHHHHHHHHHHHHH
Q 016592 250 NWTGFISAMISNISFTYRSIYSKKAM-VEGPQLIKH-----------------GLSDAISKVGMVKFISDLFWVGMFYHL 311 (386)
Q Consensus 250 ~~~G~~~~l~s~l~~a~~~vl~k~~~-~~g~~l~~~-----------------~~~~~~~~~~~~~~~~~l~~~gv~~~l 311 (386)
+..|+++++.+-+.|++--.+.|-+. ..+.....+ .+....+....+..+..+...++.- .
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li-~ 83 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI-G 83 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-H
Confidence 34699999999999999999988765 111111111 1111122222233333344444332 3
Q ss_pred HHHHHH-HHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHH
Q 016592 312 YNQLAT-NTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 372 (386)
Q Consensus 312 ~~~~~~-~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~ 372 (386)
.|...| +++..-..+..|...+++|.+.+++|.++++|+++..|++..++..+||..-.+.
T Consensus 84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 444333 6788889999999999999999999999999999999999999999999775544
No 75
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.99 E-value=0.0016 Score=61.94 Aligned_cols=64 Identities=20% Similarity=0.299 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcc
Q 016592 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (386)
Q Consensus 180 ~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~ 243 (386)
+.+.++-..++.|+.+.|.+..+-+.++..+..++++.++++||++..-.++.+++++|..+..
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 3466788899999999999999999999999999999999999999999999999999998664
No 76
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.98 E-value=0.0023 Score=59.84 Aligned_cols=76 Identities=24% Similarity=0.293 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhhh
Q 016592 300 SDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 375 (386)
Q Consensus 300 ~~l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~~ 375 (386)
......++++.+.|...|..++..+|.++.+....|.+++.++++++++.+++..||+++.+.+.|+.+.......
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 4456678889999999999999999999999999999999999999999999999999999999999997765443
No 77
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.86 E-value=0.00012 Score=66.82 Aligned_cols=208 Identities=15% Similarity=0.154 Sum_probs=145.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHH-hhhHHHHHHHHHHHhCCcCChhhH----HHHHHHHhhh
Q 016592 165 APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGV 239 (386)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~-s~~Pvf~~lls~l~l~ek~s~~~~----lsl~l~v~Gv 239 (386)
+..+.+.+..-+..|++...++...+-|++++++|.+.-+. .+.-+-+.+++++.++|-.+..+. ++++++++|+
T Consensus 52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~ 131 (288)
T COG4975 52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI 131 (288)
T ss_pred CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence 45566666667777888999999999999999999877554 456777889999999997776554 5788899999
Q ss_pred hhcccCCc--------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccchhchh-hhHHHHhh---------hchHHHHHH
Q 016592 240 SMASLTEL--------SFNWTGFISAMISNISFTYRSIYSKKAMVEGPQLIKH-GLSDAISK---------VGMVKFISD 301 (386)
Q Consensus 240 ~l~~~~~~--------~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~-~~~~~~~~---------~~~~~~~~~ 301 (386)
.+.++.|. ++.-.|+...+.|.+.|..|.+..+...++|...+.+ ...+.+.. .........
T Consensus 132 ~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~~~~~~~~~~K~t~~ 211 (288)
T COG4975 132 YLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILGFFKMEKRFNKYTWL 211 (288)
T ss_pred eEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHhhcccccchHHHHHH
Confidence 99887653 1123688888899999999999999888777654322 22111111 111122222
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhh----hHhHHHHHHHHHHHHHH
Q 016592 302 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQT----GIGTVIAIAGVAAYSYI 372 (386)
Q Consensus 302 l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~----~~G~~lii~Gv~ly~~~ 372 (386)
-...|+..-..|...+..-++.+-.|.=...-+--+++++-++++++|+=|..+ ++|+++++.|..+....
T Consensus 212 nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~ 286 (288)
T COG4975 212 NIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIA 286 (288)
T ss_pred HHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhee
Confidence 344566555566665555566655544344556668899999999999887764 57888888887765543
No 78
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.85 E-value=0.04 Score=44.50 Aligned_cols=98 Identities=14% Similarity=0.070 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhchhhhHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccch-HHHHHHHH
Q 016592 255 ISAMISNISFTYRSIYSKKAMVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAP-LTHAVGNV 333 (386)
Q Consensus 255 ~~~l~s~l~~a~~~vl~k~~~~~g~~l~~~~~~~~~~~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~-~t~sv~~~ 333 (386)
++.+++.++....+...|+. +|.. ........+...++..++.. .++++.+. +.+++-.-
T Consensus 4 l~L~~Ai~~Ev~~t~~Lk~s--~gf~-------------~~~~~~~~i~~~~~sf~~Ls----~al~~ip~gvaYAvW~G 64 (105)
T PRK11431 4 IILVIAGLLEVVWAVGLKYT--HGFS-------------RLTPSIITVTAMIVSMALLA----WAMKSLPVGTAYAVWTG 64 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhh--hCCc-------------cHHHHHHHHHHHHHHHHHHH----HHHhhCCcHhHHHHHHH
Confidence 45566777777777776654 1110 00011111222233333333 35566543 45677777
Q ss_pred HHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHH
Q 016592 334 LKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 371 (386)
Q Consensus 334 l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~ 371 (386)
+-.+.+.+.++++|||++++.+++|+.+++.|+...+.
T Consensus 65 iG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 65 IGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 88899999999999999999999999999999988654
No 79
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.72 E-value=0.057 Score=52.69 Aligned_cols=134 Identities=17% Similarity=0.268 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHH-HHHhCCCC--CCCCCHHHHHHHHHHHHHHHHHHHH
Q 016592 112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPK--RAPIDSKLLKLLIPVAVCHALGHVT 188 (386)
Q Consensus 112 ~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (386)
+++++-..+....|++.|+..++.+....+.+.- +++.++..+ +......+ ..+.+.+....++..+++......+
T Consensus 171 ll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~G-lfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l 249 (334)
T PF06027_consen 171 LLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLG-LFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLFYSL 249 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHH-HHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHHHHH
Confidence 3444444444566778888888776333332222 223332222 11111111 1222333333333334443334445
Q ss_pred HHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCC
Q 016592 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (386)
Q Consensus 189 ~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~ 246 (386)
....+++.++.+..+-..+..++.+++..+++|+++++.-+++.+++++|+++....+
T Consensus 250 ~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 250 VPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 5667788888888888899999999999999999999999999999999999886554
No 80
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.71 E-value=0.013 Score=56.41 Aligned_cols=115 Identities=19% Similarity=0.193 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccch-hchhhhHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHH
Q 016592 250 NWTGFISAMISNISFTYRSIYSKKAMVEGPQ-LIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTH 328 (386)
Q Consensus 250 ~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~~-l~~~~~~~~~~~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s~~t~ 328 (386)
..+|..++++++++.+....++|+.....+. -.... .........+.||..+...+ .+...+. .++...++...
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-~~~~~~l~~~~W~~G~~~~~-~g~~~~~---~Al~~ap~slv 79 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-SGGRSYLRRPLWWIGLLLMV-LGEILNF---VALGFAPASLV 79 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-chhhHHHhhHHHHHHHHHHh-cchHHHH---HHHHhhhHHHH
Confidence 4579999999999999999999998633222 11100 00111122222333322222 2333443 44567777777
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016592 329 AVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 369 (386)
Q Consensus 329 sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly 369 (386)
+..+.+.-++..+++..+++|+++...+.|+++++.|..+.
T Consensus 80 ~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 80 APLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred HHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence 77788889999999999999999999999999999998764
No 81
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.63 E-value=0.061 Score=43.27 Aligned_cols=55 Identities=20% Similarity=0.208 Sum_probs=45.8
Q ss_pred HHhhccch-HHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHH
Q 016592 318 NTLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 372 (386)
Q Consensus 318 ~~l~~~s~-~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~ 372 (386)
.++|+++- +.+++-.-+-.+.+.+.++++|||++++.+++|+.++++|+...+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 45566654 34567777888899999999999999999999999999999987654
No 82
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.61 E-value=0.017 Score=45.54 Aligned_cols=58 Identities=17% Similarity=0.288 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhhhhccchHHHHHHH-hhhHHHHHHHHHHHhCCcCChhhHHHHHHH
Q 016592 178 VAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWLSLAPV 235 (386)
Q Consensus 178 ~~~~~~~~~~~~~~al~~vsvs~~~ii~-s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~ 235 (386)
...++.++..+...++++++.+.+..+- ....+.+.+.+.+++||+++..+++++.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3446778888999999999999987654 689999999999999999999999998764
No 83
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.60 E-value=0.1 Score=44.38 Aligned_cols=116 Identities=16% Similarity=0.129 Sum_probs=83.0
Q ss_pred HHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHH
Q 016592 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLP-KRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT 203 (386)
Q Consensus 125 ~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~i 203 (386)
..+|-++-+....|+.-+++-+.++.+.+.+++....+ +.....+.+|+. ...|++.+....+.......++++.+..
T Consensus 17 ~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~~~~~vp~lG~~~~~~ 95 (138)
T PF04657_consen 17 AAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLSNIILVPRLGAALTTI 95 (138)
T ss_pred HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 35566655555569999999999999877665443333 222222223333 4478888888899999999999888766
Q ss_pred HH-hhhHHHHHHHHHH----HhCCcCChhhHHHHHHHHhhhhh
Q 016592 204 IK-ALEPFFNAAASQF----ILGQQLPLTLWLSLAPVVIGVSM 241 (386)
Q Consensus 204 i~-s~~Pvf~~lls~l----~l~ek~s~~~~lsl~l~v~Gv~l 241 (386)
+. ...-+..+++.++ .-+++++..++++++++++|+.+
T Consensus 96 l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 96 LIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 55 5556777777776 34689999999999999999864
No 84
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.42 E-value=0.039 Score=50.48 Aligned_cols=67 Identities=13% Similarity=0.123 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhh
Q 016592 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (386)
Q Consensus 175 ~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l 241 (386)
.+...++.+.+..+..+.++|.+.....+...+.++++.+++.++++|+++..++++..+++.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3444566777888899999999999999999999999999999999999999999999999998764
No 85
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.85 E-value=0.11 Score=40.79 Aligned_cols=45 Identities=22% Similarity=0.179 Sum_probs=24.3
Q ss_pred HHhhccchHHH-HHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHH
Q 016592 318 NTLERVAPLTH-AVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 362 (386)
Q Consensus 318 ~~l~~~s~~t~-sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~li 362 (386)
.++++.+..+. .+..-+-.+.+.+.|+++|||++|+.+++|+.++
T Consensus 48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 46677655443 5666678899999999999999999999999875
No 86
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.50 E-value=0.33 Score=46.18 Aligned_cols=135 Identities=11% Similarity=0.132 Sum_probs=96.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhCCCCCC-----CCCHHHHHHHHHHHH
Q 016592 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRA-----PIDSKLLKLLIPVAV 180 (386)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~i~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 180 (386)
.......++.+.+.-...|--++.++.++. .++-+.+.-.++..++..........-.. ...++.++.++..+.
T Consensus 170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~ 249 (327)
T KOG1581|consen 170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST 249 (327)
T ss_pred chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence 445566666676666666667777777543 23444433333333333322222111111 235677889999999
Q ss_pred HHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhh
Q 016592 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (386)
Q Consensus 181 ~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l 241 (386)
|.+.++.+-++-+..-+.=..++|..+-=++..+++.+.++.+.+..+|+++.+++.|+.+
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 9999999999999988888888889999999999999999999999999999999998875
No 87
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.36 E-value=0.019 Score=53.43 Aligned_cols=77 Identities=13% Similarity=0.136 Sum_probs=66.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhc
Q 016592 166 PIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (386)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~ 242 (386)
|..++++..++.+|++..+++.+...++|.--++-..+.+++..+|..+...+++++.|+++.|.|.++++...+.+
T Consensus 247 P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 247 PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 34555666777889999999999999999988888999999999999999999999999999999988776665544
No 88
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=94.37 E-value=0.13 Score=42.03 Aligned_cols=69 Identities=22% Similarity=0.359 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccchHHHHHH-HhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhh
Q 016592 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (386)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii-~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l 241 (386)
++..++.. ++..+.+.+++.+...+.|.+.-+ .++.=+||++.++++.+|..+++.++++++++.|+.+
T Consensus 42 ~~y~ipf~-lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 42 PKYIIPFL-LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34445433 345677788889999999998877 5999999999999888888899999999999999875
No 89
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.26 E-value=2 Score=36.84 Aligned_cols=119 Identities=18% Similarity=0.183 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HH-HHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 016592 123 IFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SK-LLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (386)
Q Consensus 123 ~~~i~nK~~l~~f~~P~~lt~~r~~~~~l~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~al~~vsvs 199 (386)
..+-.|-++-+....|+.-++..+.++.+.+.++...+ .+.++.. ++ .|+. +..|++.+.....+......+++.
T Consensus 19 ~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~-~~GG~lGa~~vt~s~~l~p~lGa~ 96 (150)
T COG3238 19 LQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWA-WIGGLLGAIFVTSSILLAPRLGAA 96 (150)
T ss_pred hHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHH-HHccchhhhhhhhhHHhccchhHH
Confidence 33456666666666799999999999988766544332 2222221 22 3433 344566665555566666667665
Q ss_pred HHH-HHHhhhHHHHHHHHHHHh----CCcCChhhHHHHHHHHhhhhhcc
Q 016592 200 FTH-TIKALEPFFNAAASQFIL----GQQLPLTLWLSLAPVVIGVSMAS 243 (386)
Q Consensus 200 ~~~-ii~s~~Pvf~~lls~l~l----~ek~s~~~~lsl~l~v~Gv~l~~ 243 (386)
.++ .+-+..-+.-+++..+=+ +++++..++++++++++|+.+..
T Consensus 97 ~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 97 TTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 544 445666667777766643 37899999999999999965543
No 90
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=93.84 E-value=0.23 Score=48.14 Aligned_cols=69 Identities=28% Similarity=0.274 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHH
Q 016592 302 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 370 (386)
Q Consensus 302 l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~ 370 (386)
+...++.+.+.|...|..+...+|.|+.+...+|...+.+++.++++++++..||...++.+.|+.+.+
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 444566777888888889999999999999999999999999999999999999999999999999987
No 91
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=93.41 E-value=0.29 Score=47.33 Aligned_cols=137 Identities=13% Similarity=0.082 Sum_probs=99.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhh----CCchHHHHHHHHHHHHHHHH-HHHHhCCCCCC------CCCHHHHHH
Q 016592 106 PALVTGFFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCL-VSWAVGLPKRA------PIDSKLLKL 174 (386)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~i~nK~~l~~----f~~P~~lt~~r~~~~~l~l~-~~~~~~~~~~~------~~~~~~~~~ 174 (386)
-.+....+...+.+....-+++.|.++.. .+ ++.+..+.--++.+.++ +.+....+... +.+.. ...
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~ 237 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLI 237 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHH
Confidence 35677778888888888888999999852 44 66666666556666555 54433222111 22222 233
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 175 ~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
++..+++..+.+...+..+..+++=..++...+.=+++.+.++++++++.+..+.+|.++.++|+.+...
T Consensus 238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 4444567677778888888899988888888888888889999999999999999999999999998653
No 92
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.16 E-value=0.43 Score=38.96 Aligned_cols=39 Identities=33% Similarity=0.324 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016592 330 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 368 (386)
Q Consensus 330 v~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~l 368 (386)
+.|.+.-+++.+.++++..|..+...++|+++++.|+.+
T Consensus 73 i~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 73 IANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 456778889999999888888899999999999999864
No 93
>PRK13499 rhamnose-proton symporter; Provisional
Probab=90.56 E-value=12 Score=36.76 Aligned_cols=69 Identities=9% Similarity=0.101 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHhhhhccchHHHHH---HH-hhhHHHHHHHHHHHhCCcCC------hhhHHHHHHHHhhhhhcccC
Q 016592 176 IPVAVCHALGHVTSNVSFAAVAVSFTHT---IK-ALEPFFNAAASQFILGQQLP------LTLWLSLAPVVIGVSMASLT 245 (386)
Q Consensus 176 ~~~~~~~~~~~~~~~~al~~vsvs~~~i---i~-s~~Pvf~~lls~l~l~ek~s------~~~~lsl~l~v~Gv~l~~~~ 245 (386)
...|++..+++.+...+-...+.....+ +. ++..++..+-+. ++||+-+ ...+++++++++|..+...+
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 5557778888888888888776554444 55 555566666565 6998766 56678888888888776544
No 94
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=90.39 E-value=3.2 Score=40.78 Aligned_cols=141 Identities=13% Similarity=0.117 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhC----CchHHHHHHHH---HHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHH
Q 016592 108 LVTGFFFFMWYFLNVIFNILNKRIYNYF----PYPYFVSVIHL---LVGVVYCLVSWAVGLPKRAPID-SKLLKLLIPVA 179 (386)
Q Consensus 108 l~~~~~~~~w~~~~~~~~i~nK~~l~~f----~~P~~lt~~r~---~~~~l~l~~~~~~~~~~~~~~~-~~~~~~~~~~~ 179 (386)
+..-++..+-.++...+.++-|+-.++- +-+.++.+.-. +.....+.++-+.+.+ +.+.. ..+...++..+
T Consensus 246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e-~F~lP~~~q~~~vv~~~ 324 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEE-RFELPSSTQFSLVVFNN 324 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccC-cccCCCCceeEeeeHhh
Confidence 4444444444444455566667655542 33444433322 1111112222223322 22222 22333344444
Q ss_pred HH-HHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCccc
Q 016592 180 VC-HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSF 249 (386)
Q Consensus 180 ~~-~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~~ 249 (386)
+. ..+.-+++..|...++.-.+++-.+.+....++.-.++.++.+++..++|.+++++|.++++..+...
T Consensus 325 ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~ 395 (416)
T KOG2765|consen 325 LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENS 395 (416)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccc
Confidence 44 34677789999999999999999999999999999999999999999999999999999987765433
No 95
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=89.27 E-value=0.19 Score=44.81 Aligned_cols=63 Identities=17% Similarity=0.294 Sum_probs=54.4
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHHHhh
Q 016592 312 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 374 (386)
Q Consensus 312 ~~~~~~~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~~~~ 374 (386)
-|+....++++++|...+-....+..+..+++|+++||++....++..++.+.|+.+.++..+
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 345555788999999999999999999999999999999999999999999999877655443
No 96
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=87.53 E-value=0.92 Score=41.71 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhh
Q 016592 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (386)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l 241 (386)
..+..+..++++.++++++.+.-..+.++=.-+++..+--+|+.+.+.++++..++.+||++.++++.|...
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 356777888999999999998888888877778888888999999999999999999999999999988764
No 97
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.83 E-value=0.11 Score=49.78 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=73.9
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccch-hch---hhhHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016592 249 FNWTGFISAMISNISFTYRSIYSKKAMVEGPQ-LIK---HGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVA 324 (386)
Q Consensus 249 ~~~~G~~~~l~s~l~~a~~~vl~k~~~~~g~~-l~~---~~~~~~~~~~~~~~~~~~l~~~gv~~~l~~~~~~~~l~~~s 324 (386)
.+..|..+++.|.+..+...++.||...+-.. -.. .++.. ... ++|+.-++.-..+-..|+.+| ...+
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~y----l~~-~~Ww~G~ltm~vGei~NFaAY---aFAP 89 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGY----LKE-PLWWAGMLTMIVGEIANFAAY---AFAP 89 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcch----hhh-HHHHHHHHHHHHHhHhhHHHH---hhch
Confidence 45679999999999999888888887632111 000 01111 111 222222222223445566555 4555
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016592 325 PLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 368 (386)
Q Consensus 325 ~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~l 368 (386)
+.-.+-++.+.-+...+++..+++|.+++...+|++++++|..+
T Consensus 90 asLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~ 133 (335)
T KOG2922|consen 90 ASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTT 133 (335)
T ss_pred HhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEE
Confidence 55566667788899999999999999999999999999999754
No 98
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=84.04 E-value=5.7 Score=38.22 Aligned_cols=135 Identities=12% Similarity=0.009 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHH-HhCCCC------CCCCCHHHHHHHHHHHHH
Q 016592 110 TGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSW-AVGLPK------RAPIDSKLLKLLIPVAVC 181 (386)
Q Consensus 110 ~~~~~~~w~~~~~~~~i~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~ 181 (386)
...|.....++......+.|+..+.-+ .-+.+.++..+.....+.+.+ ..+..+ ....+...+..+...+++
T Consensus 158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~ 237 (314)
T KOG1444|consen 158 GYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVM 237 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHH
Confidence 567777777777788888998877422 134455566666655544433 222111 001122345566666667
Q ss_pred HHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 182 ~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
..+-.++..+.....|...+++.....-..+.+...++.++..++....|+.+.+.|-++.++
T Consensus 238 gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 238 GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence 777778888888888888888888777777777777778888899999998888888877654
No 99
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=83.00 E-value=0.74 Score=42.61 Aligned_cols=68 Identities=10% Similarity=0.123 Sum_probs=55.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHH
Q 016592 165 APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233 (386)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~ 233 (386)
++.++..++.+ ..|++++.++.+...|-+.+++...-.+..+..+...+-+.+++|||-+.+++..+.
T Consensus 203 ~~~~K~t~~ni-i~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~ 270 (288)
T COG4975 203 KRFNKYTWLNI-IPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVI 270 (288)
T ss_pred cchHHHHHHHH-hhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhh
Confidence 34455455554 459999999999999999999998888999999999999999999999988875443
No 100
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=82.05 E-value=15 Score=33.79 Aligned_cols=125 Identities=10% Similarity=0.021 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHh-CCCC----CCCCCHHHHHHHHHHHHHHHHHHHHH
Q 016592 117 WYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAV-GLPK----RAPIDSKLLKLLIPVAVCHALGHVTS 189 (386)
Q Consensus 117 w~~~~~~~~i~nK~~l~--~f~~P~~lt~~r~~~~~l~l~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (386)
-...+..+.+..|+..+ +|. -+.-.++.-+.+...++.+-+. .-+. ...+..+.+..+++.|++..+-.++.
T Consensus 163 NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~s 241 (309)
T COG5070 163 NCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCS 241 (309)
T ss_pred hhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhcc
Confidence 33344444444444433 454 4556667777777665544322 1111 11233445567778888888888888
Q ss_pred HhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhc
Q 016592 190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (386)
Q Consensus 190 ~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~ 242 (386)
-+.+.-++...+.++.++.-...++.+.+++++..+...+.+++++....++.
T Consensus 242 aWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY 294 (309)
T COG5070 242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY 294 (309)
T ss_pred ceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999988777665554
No 101
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=79.51 E-value=65 Score=31.54 Aligned_cols=160 Identities=16% Similarity=0.216 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHH-HHHHHHHHHHHHH-HhCCCCC----CCCCHHHHHHHHHHHHHHH
Q 016592 110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVI-HLLVGVVYCLVSW-AVGLPKR----APIDSKLLKLLIPVAVCHA 183 (386)
Q Consensus 110 ~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~lt~~-r~~~~~l~l~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~ 183 (386)
..++..+=.+++.++.+=-|++ +++. |.-..+ +-+++.++...++ ....|.. ...+.+.+......|++..
T Consensus 8 Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lWG 84 (344)
T PF06379_consen 8 GIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLWG 84 (344)
T ss_pred HHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHHh
Confidence 3444444455555666555554 2232 332222 4444544433221 2222221 1233445666677788888
Q ss_pred HHHHHHHhhhhccchHHHH-HHHhhhHHHHHHHHHHHhC-------CcCChhhHHHHHHHHhhhhhcccC----C-----
Q 016592 184 LGHVTSNVSFAAVAVSFTH-TIKALEPFFNAAASQFILG-------QQLPLTLWLSLAPVVIGVSMASLT----E----- 246 (386)
Q Consensus 184 ~~~~~~~~al~~vsvs~~~-ii~s~~Pvf~~lls~l~l~-------ek~s~~~~lsl~l~v~Gv~l~~~~----~----- 246 (386)
++...+=.++.|++++..+ +...+.-++-.++-.++.+ ++-....++++++.++|+++.... |
T Consensus 85 IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~ 164 (344)
T PF06379_consen 85 IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGE 164 (344)
T ss_pred cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhcc
Confidence 8888888999998888754 3334444444444444433 233457889999999999986432 1
Q ss_pred --ccccH-HHHHHHHHHHHHHHHHHHHHH
Q 016592 247 --LSFNW-TGFISAMISNISFTYRSIYSK 272 (386)
Q Consensus 247 --~~~~~-~G~~~~l~s~l~~a~~~vl~k 272 (386)
.+||+ .|++.+++|.+..+..++-..
T Consensus 165 ~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 165 EAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 23453 799999999998888877553
No 102
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=78.84 E-value=33 Score=33.56 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-------CccchhhhHhHHHHHHHHHHHHHHhhhhHH
Q 016592 326 LTHAVGNVLKRVFVIGFSILAFG-------NKISTQTGIGTVIAIAGVAAYSYIKAQMEE 378 (386)
Q Consensus 326 ~t~sv~~~l~~v~~il~s~l~fg-------e~lt~~~~~G~~lii~Gv~ly~~~~~~~~~ 378 (386)
+..++.--+..++..++--++.| ++-....++|.+++++|+.+..++-.++++
T Consensus 101 LG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~ 160 (344)
T PF06379_consen 101 LGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK 160 (344)
T ss_pred HHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence 33344433444445555444432 233446899999999999998876544333
No 103
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=74.12 E-value=18 Score=30.56 Aligned_cols=67 Identities=15% Similarity=0.170 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHH-HHHHHHHHH-Hh---CCccchhhhHhHHHHHHHHHH
Q 016592 302 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKR-VFVIGFSIL-AF---GNKISTQTGIGTVIAIAGVAA 368 (386)
Q Consensus 302 l~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~l~~-v~~il~s~l-~f---ge~lt~~~~~G~~lii~Gv~l 368 (386)
....|+++..+-......+.+.++.........-. +.+.+++.+ +| .+++++..++|.++++.|+++
T Consensus 67 ~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 67 AYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 33367777666666667789999988876555444 445555554 33 357999999999999999864
No 104
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=62.88 E-value=3.4 Score=38.81 Aligned_cols=73 Identities=14% Similarity=0.124 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHhhccchHH-HHHHHHHHHHHHHHHHHH-HhCCc-----cchhhhHhHHHHHHHHHHHHHHhhhh
Q 016592 304 WVGMFYHLYNQLATNTLERVAPLT-HAVGNVLKRVFVIGFSIL-AFGNK-----ISTQTGIGTVIAIAGVAAYSYIKAQM 376 (386)
Q Consensus 304 ~~gv~~~l~~~~~~~~l~~~s~~t-~sv~~~l~~v~~il~s~l-~fge~-----lt~~~~~G~~lii~Gv~ly~~~~~~~ 376 (386)
+.|.+....|....-+++.++-.. ..+-+..+-+..-..|-+ +||++ -.+.+++|++++++|..+|...|...
T Consensus 60 lgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 60 LGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 334433334443333444443221 123344444444444433 56543 45679999999999999998766443
No 105
>COG5373 Predicted membrane protein [Function unknown]
Probab=59.20 E-value=2.8e+02 Score=30.54 Aligned_cols=28 Identities=4% Similarity=-0.012 Sum_probs=20.7
Q ss_pred HhhhhccchHHHHHHHhhhHHHHHHHHH
Q 016592 190 NVSFAAVAVSFTHTIKALEPFFNAAASQ 217 (386)
Q Consensus 190 ~~al~~vsvs~~~ii~s~~Pvf~~lls~ 217 (386)
+.=+-+++.+.+-++-.+.-+-++.++.
T Consensus 218 ~~iyd~i~pgaAf~LL~lIs~~t~~LAl 245 (931)
T COG5373 218 YGIYDLIGPGAAFALLVLISLATIGLAL 245 (931)
T ss_pred hcccccCChhHHHHHHHHHHHHHHHHHH
Confidence 3334578888888888888888877764
No 106
>PRK02237 hypothetical protein; Provisional
Probab=58.75 E-value=18 Score=29.13 Aligned_cols=45 Identities=18% Similarity=0.104 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHH
Q 016592 327 THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 371 (386)
Q Consensus 327 t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~ 371 (386)
.++..+-+-.+.+++..+.+-|.+++...++|..++++|+.+.-+
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 345667778889999999999999999999999999999876543
No 107
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=58.52 E-value=11 Score=30.26 Aligned_cols=31 Identities=13% Similarity=0.128 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016592 338 FVIGFSILAFGNKISTQTGIGTVIAIAGVAA 368 (386)
Q Consensus 338 ~~il~s~l~fge~lt~~~~~G~~lii~Gv~l 368 (386)
+-+.+++++++|++++..+.|.++++.++++
T Consensus 75 vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred eeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 3456888999999999999999999888654
No 108
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=57.48 E-value=9.3 Score=31.64 Aligned_cols=41 Identities=20% Similarity=0.406 Sum_probs=31.1
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHH
Q 016592 105 YPALVTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIH 145 (386)
Q Consensus 105 ~~~l~~~~~~~~w~~~~~~~~i~nK~~l~~f~-~P~~lt~~r 145 (386)
+..+.++.+.++..++++...++-|.+...++ ||++++.+-
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlT 94 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLT 94 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhc
Confidence 34567777777777777777789999888764 888888774
No 109
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=57.14 E-value=30 Score=32.96 Aligned_cols=52 Identities=15% Similarity=0.146 Sum_probs=43.3
Q ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016592 318 NTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 369 (386)
Q Consensus 318 ~~l~~~s~~t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly 369 (386)
-.+..+++..+.+..-...+++-++|.-+++.+++..+|+|+..+..|+...
T Consensus 105 vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviV 156 (372)
T KOG3912|consen 105 VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIV 156 (372)
T ss_pred HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhee
Confidence 3445677777777777777899999999999999999999999999998753
No 110
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=55.84 E-value=1.1e+02 Score=24.71 Aligned_cols=54 Identities=15% Similarity=0.238 Sum_probs=35.3
Q ss_pred HHHhhhhccchHHHHHHH-hhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhh
Q 016592 188 TSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (386)
Q Consensus 188 ~~~~al~~vsvs~~~ii~-s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l 241 (386)
.+-.+.+..+...--+++ ..+-..-+.++.+++||++++....+.+.+++++..
T Consensus 51 ANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 51 ANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred chhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 344444444433333332 334445566788999999999999999988877754
No 111
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=55.53 E-value=28 Score=28.02 Aligned_cols=45 Identities=22% Similarity=0.154 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHHH
Q 016592 327 THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 371 (386)
Q Consensus 327 t~sv~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly~~ 371 (386)
.++..+-+-.+.+++.++.+-+++++...++|..+++.|+.+.-+
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 345666678889999999999999999999999999999876543
No 112
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.79 E-value=88 Score=26.91 Aligned_cols=69 Identities=12% Similarity=0.178 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccchHHHHHHHH-HHHHHHHHHHHHH-hC---CccchhhhHhHHHHHHHHHHHHH
Q 016592 303 FWVGMFYHLYNQLATNTLERVAPLTHAVGNV-LKRVFVIGFSILA-FG---NKISTQTGIGTVIAIAGVAAYSY 371 (386)
Q Consensus 303 ~~~gv~~~l~~~~~~~~l~~~s~~t~sv~~~-l~~v~~il~s~l~-fg---e~lt~~~~~G~~lii~Gv~ly~~ 371 (386)
+..|+++..+-........+.++.+....-. -+-+.+.+.+.+= || .+++...++|++++++|+++.+.
T Consensus 73 ~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 73 WIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred HHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 3345555555555556678888877654433 3334445544432 23 46999999999999999666543
No 113
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.21 E-value=52 Score=26.10 Aligned_cols=32 Identities=9% Similarity=0.124 Sum_probs=27.0
Q ss_pred HHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016592 338 FVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 369 (386)
Q Consensus 338 ~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly 369 (386)
+-..+|++.++||+.+..+.|..++..|+.+.
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 34568999999999999999999998887653
No 114
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=43.46 E-value=33 Score=32.58 Aligned_cols=133 Identities=14% Similarity=0.099 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHH-hCCC----CCCCC-CHHHHHHHHHHHHH
Q 016592 110 TGFFFFMWYFLNVIFN-ILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWA-VGLP----KRAPI-DSKLLKLLIPVAVC 181 (386)
Q Consensus 110 ~~~~~~~w~~~~~~~~-i~nK~~l~~f~-~P~~lt~~r~~~~~l~l~~~~~-~~~~----~~~~~-~~~~~~~~~~~~~~ 181 (386)
.+..+.+|.-+...++ ++.|..+.... .-|.++++.-+.+.++.++... .+.. ..+.. +.+.|..+.+.|++
T Consensus 185 ~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglf 264 (347)
T KOG1442|consen 185 IGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLF 264 (347)
T ss_pred hhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHH
Confidence 3455555655555555 78887766533 4578899988888776655433 2211 11111 23344444445555
Q ss_pred HHHHHHHHHhhhhccchHHHHHHHhhh-HHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcc
Q 016592 182 HALGHVTSNVSFAAVAVSFTHTIKALE-PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (386)
Q Consensus 182 ~~~~~~~~~~al~~vsvs~~~ii~s~~-Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~ 243 (386)
.+...+...+=. ++..+.++.|..+. -..=.+++..+++|.-+...|-+-+++++|..+..
T Consensus 265 gF~mgyvTg~QI-K~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 265 GFAMGYVTGWQI-KVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred HHHhhheeeEEE-EecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 332222221112 34445555444333 45556778889999999999988888888876543
No 115
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=42.11 E-value=75 Score=30.31 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=33.5
Q ss_pred HHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcc
Q 016592 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (386)
Q Consensus 203 ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~ 243 (386)
+.-.+-=++..+++.++++..++++.|+|..++++|..+.+
T Consensus 273 lvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 273 LVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred EeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 33444567788888889999999999999999999998764
No 116
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=40.32 E-value=94 Score=28.83 Aligned_cols=18 Identities=11% Similarity=0.071 Sum_probs=11.8
Q ss_pred cchhhhHhHHHHHHHHHH
Q 016592 351 ISTQTGIGTVIAIAGVAA 368 (386)
Q Consensus 351 lt~~~~~G~~lii~Gv~l 368 (386)
...+.|++-++++.|.++
T Consensus 219 ~n~q~wLwwi~~vlG~ll 236 (262)
T KOG4812|consen 219 FNGQYWLWWIFLVLGLLL 236 (262)
T ss_pred cccchHHHHHHHHHHHHH
Confidence 444567777777777665
No 117
>PRK02237 hypothetical protein; Provisional
Probab=38.40 E-value=57 Score=26.37 Aligned_cols=39 Identities=10% Similarity=0.029 Sum_probs=31.5
Q ss_pred hhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhccc
Q 016592 206 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (386)
Q Consensus 206 s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~ 244 (386)
....+...+-.+.+.|++|+...+++..++++|+.+..+
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 344555556778888999999999999999999987644
No 118
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=38.02 E-value=53 Score=26.46 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=32.2
Q ss_pred hhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC
Q 016592 206 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (386)
Q Consensus 206 s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~ 245 (386)
....+...+-.+.+.|++|++..+++..++++|+.+..+.
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3445556666788889999999999999999999876543
No 119
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=34.37 E-value=2.5e+02 Score=26.89 Aligned_cols=76 Identities=12% Similarity=0.077 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccCCcc
Q 016592 173 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS 248 (386)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~~~~ 248 (386)
...+..++...+++.+...-.+--++..+.++...---.+.+++++++.+.++..-.-+..+++.|+.+=...+.+
T Consensus 261 Gy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 261 GYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 3344444443344433332233345556666666666778899999999999999999999999999976555433
No 120
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=33.47 E-value=3.5e+02 Score=24.19 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016592 251 WTGFISAMISNISFTYRSIYSKKAMV 276 (386)
Q Consensus 251 ~~G~~~~l~s~l~~a~~~vl~k~~~~ 276 (386)
+.+....++++++++.+..+.||..+
T Consensus 178 l~~~~~iiig~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 178 LPPWVYIIIGVIAFALRFYLKKKYNI 203 (206)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34778888999999999988888754
No 121
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=31.10 E-value=86 Score=20.98 Aligned_cols=10 Identities=40% Similarity=0.700 Sum_probs=5.6
Q ss_pred HHHHHHHHHh
Q 016592 364 AGVAAYSYIK 373 (386)
Q Consensus 364 ~Gv~ly~~~~ 373 (386)
.|..+|...+
T Consensus 21 iGl~IyQkik 30 (49)
T PF11044_consen 21 IGLSIYQKIK 30 (49)
T ss_pred HHHHHHHHHH
Confidence 4556666544
No 122
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=29.94 E-value=82 Score=25.42 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=45.8
Q ss_pred HHHHHHHHHhhhhccchHHHH-HHHhhhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhh
Q 016592 182 HALGHVTSNVSFAAVAVSFTH-TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (386)
Q Consensus 182 ~~~~~~~~~~al~~vsvs~~~-ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l 241 (386)
.-.+..+++.-++..+.+.+. +-.+++-.|+.+.+..+..|......+++..++++|+.+
T Consensus 62 NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 62 NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 334566777778888877765 345667888999988777677788899999999999865
No 123
>PF11346 DUF3149: Protein of unknown function (DUF3149); InterPro: IPR021494 This bacterial family of proteins has no known function.
Probab=29.01 E-value=62 Score=21.49 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=19.6
Q ss_pred hCCccchhhhHhHHHHH-HHHHHHHHHhhhh
Q 016592 347 FGNKISTQTGIGTVIAI-AGVAAYSYIKAQM 376 (386)
Q Consensus 347 fge~lt~~~~~G~~lii-~Gv~ly~~~~~~~ 376 (386)
|++++...+.+.++.++ .+++++.+..++.
T Consensus 7 F~s~vGL~Sl~vI~~~igm~~~~~~~F~~k~ 37 (42)
T PF11346_consen 7 FGSDVGLMSLIVIVFTIGMGVFFIRYFIRKM 37 (42)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888877765 3445555544443
No 124
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=26.33 E-value=3.5e+02 Score=21.89 Aligned_cols=40 Identities=20% Similarity=0.134 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016592 330 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 369 (386)
Q Consensus 330 v~~~l~~v~~il~s~l~fge~lt~~~~~G~~lii~Gv~ly 369 (386)
+.|.+.-.+....+..+-.|...-..++|..+++.|+.+.
T Consensus 84 v~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 84 VTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred ecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 3445555677778876555556677899999999998764
No 125
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=25.97 E-value=84 Score=24.22 Aligned_cols=26 Identities=15% Similarity=0.252 Sum_probs=21.2
Q ss_pred ccchhhhHhHHHHHHHHHHHHHHhhh
Q 016592 350 KISTQTGIGTVIAIAGVAAYSYIKAQ 375 (386)
Q Consensus 350 ~lt~~~~~G~~lii~Gv~ly~~~~~~ 375 (386)
.+++..++|+++++.|..+|.....+
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~ 29 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFR 29 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 47888999999999999999765433
No 126
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=22.45 E-value=1.1e+02 Score=20.90 Aligned_cols=21 Identities=10% Similarity=0.232 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHH
Q 016592 359 TVIAIAGVAAYSYIKAQMEEE 379 (386)
Q Consensus 359 ~~lii~Gv~ly~~~~~~~~~~ 379 (386)
..++++|+.+|.+.+.++++-
T Consensus 19 ~~~~Figiv~wa~~p~~k~~f 39 (48)
T cd01324 19 LALFFLGVVVWAFRPGRKKAF 39 (48)
T ss_pred HHHHHHHHHHHHhCCCcchhH
Confidence 467789999999887665543
No 127
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=22.17 E-value=1.2e+02 Score=24.42 Aligned_cols=39 Identities=15% Similarity=0.071 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHHHhCCcCChhhHHHHHHHHhhhhhcccC
Q 016592 207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (386)
Q Consensus 207 ~~Pvf~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~~~~ 245 (386)
...+...+-.++.-|+++++..+.+..++++|+.++.+.
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 344455566677889999999999999999998876543
No 128
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=21.92 E-value=2.4e+02 Score=23.30 Aligned_cols=21 Identities=14% Similarity=-0.010 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 016592 326 LTHAVGNVLKRVFVIGFSILA 346 (386)
Q Consensus 326 ~t~sv~~~l~~v~~il~s~l~ 346 (386)
...+...++-|++.++++.++
T Consensus 68 ~~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 68 LKAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334445555555555555443
No 129
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=21.92 E-value=4.2e+02 Score=22.70 Aligned_cols=11 Identities=27% Similarity=0.247 Sum_probs=5.9
Q ss_pred HHHHHhCCccc
Q 016592 342 FSILAFGNKIS 352 (386)
Q Consensus 342 ~s~l~fge~lt 352 (386)
+..++++|.+.
T Consensus 96 a~~L~~~e~~~ 106 (150)
T COG3086 96 AQYLFFSELIV 106 (150)
T ss_pred HHHHhhhhHHH
Confidence 45555566544
No 130
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.86 E-value=4.2e+02 Score=21.14 Aligned_cols=31 Identities=16% Similarity=0.117 Sum_probs=26.2
Q ss_pred HHHHHHHHhCCcCChhhHHHHHHHHhhhhhc
Q 016592 212 NAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (386)
Q Consensus 212 ~~lls~l~l~ek~s~~~~lsl~l~v~Gv~l~ 242 (386)
-+.++.+++||.+.+..+.+..++.+|+.++
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 3457889999999999999999888888754
No 131
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.65 E-value=1.3e+03 Score=27.18 Aligned_cols=17 Identities=12% Similarity=0.079 Sum_probs=8.3
Q ss_pred hhhHHHHHHHHHHHhCC
Q 016592 206 ALEPFFNAAASQFILGQ 222 (386)
Q Consensus 206 s~~Pvf~~lls~l~l~e 222 (386)
...|++..+..++++++
T Consensus 84 YLLP~LL~~~a~~l~R~ 100 (1355)
T PRK10263 84 YTIPVIIVGGCWFAWRH 100 (1355)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 34455554555555443
No 132
>COG3162 Predicted membrane protein [Function unknown]
Probab=20.77 E-value=4.4e+02 Score=21.00 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhh--CC----chHHHHHHHHHHHHHHHHHHHH
Q 016592 108 LVTGFFFFMWYFLNVIFNILNKRIYNY--FP----YPYFVSVIHLLVGVVYCLVSWA 158 (386)
Q Consensus 108 l~~~~~~~~w~~~~~~~~i~nK~~l~~--f~----~P~~lt~~r~~~~~l~l~~~~~ 158 (386)
+.....++.||+....+.-++|..+.. ++ ..+.+...+++.+.++..+..+
T Consensus 27 ~~ltl~flv~Y~~filLiaf~~~~l~tp~~~~~Vt~Gip~gvg~fv~tfVlt~IYv~ 83 (102)
T COG3162 27 VPLTLIFLVVYFGFILLIAFAPGWLATPLFGASVTRGIPFGVGVFVMTFVLTGIYVR 83 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhcCcccCCceehhHhHHHHHHHHHHHHHHHHhh
Confidence 667788889999999999999977663 22 3566777888888887666543
No 133
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=20.53 E-value=9.7e+02 Score=24.90 Aligned_cols=27 Identities=19% Similarity=-0.058 Sum_probs=13.4
Q ss_pred hhccchHHHHHHHHHHHHHHHHHHHHH
Q 016592 320 LERVAPLTHAVGNVLKRVFVIGFSILA 346 (386)
Q Consensus 320 l~~~s~~t~sv~~~l~~v~~il~s~l~ 346 (386)
..|+.+....+.....++-..+.|.+.
T Consensus 341 ~GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 341 RGRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444555555555544
No 134
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=20.31 E-value=7.8e+02 Score=23.70 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=56.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHH-HHHHHHHHHHH---HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH
Q 016592 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYF-VSVIHLLVGVV---YCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH 182 (386)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~i~nK~~l~~f~~P~~-lt~~r~~~~~l---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (386)
-..+..|..+-......+.+..+|++. |++ +.+.++....+ .+-........++.....+....++..++..
T Consensus 102 i~~tF~~ssIlLl~~Siss~iG~YiLa----pl~~~i~~~~gAaila~iviP~~~~y~ln~~~~s~~~~R~~ll~~a~~Q 177 (299)
T PF05884_consen 102 IVETFSWSSILLLGFSISSFIGGYILA----PLFGIIFGPFGAAILAYIVIPLIAYYYLNKEDGSLAESRLALLFFALFQ 177 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhcchhHHHHHHHHHHHHHHhhcccccCchHHHHHHHHHHHHHH
Confidence 344445555444555556677888875 433 22223322222 1111122222222222222111223333333
Q ss_pred HHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCCcCChhhHHHHH
Q 016592 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233 (386)
Q Consensus 183 ~~~~~~~~~al~~vsvs~~~ii~s~~Pvf~~lls~l~l~ek~s~~~~lsl~ 233 (386)
.+ +.=.++++..++ ..-+..++|+++.+...+..++.-++.++++..
T Consensus 178 Gv---L~Ga~ls~~~l~-sePf~~LT~iv~sfi~~~i~~~~~~R~~lLg~~ 224 (299)
T PF05884_consen 178 GV---LVGAGLSHLYLS-SEPFIALTPIVSSFIYPLIAGHGTNRQKLLGIV 224 (299)
T ss_pred HH---HHHHHhhccccc-CCcHHHHHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 22 222344454444 366778889999888888887744555555443
Done!