BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016594
(386 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 184/301 (61%), Gaps = 13/301 (4%)
Query: 56 FSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEI 115
FS E+ +A++ FS++N++GRGG+ +VYKG L DG +AVKRL K E +F TE+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL-KEERXQGGELQFQTEV 86
Query: 116 GTIGHVCHPNVLSLLG-CCVDNGLYLIFQFSSRGSVASLFHDV--NSPGVEWKVRHKIAV 172
I H N+L L G C L++ + + GSVAS + + P ++W R +IA+
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
G+ARGL YLH C +IIHRD+K++NILL +FE + DFGLAK + + H A + G
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRG 205
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS------LHSWAKPILN 286
T GH+APEY G EKTDVF +GV LLE+I+G++ D + + L W K +L
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 287 QGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLEGDQIDKERW 346
+ ++E LVD LQG Y ++ +L A LC ++SP RP MSEV+ MLEGD + ERW
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR-MLEGDGL-AERW 323
Query: 347 K 347
+
Sbjct: 324 E 324
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 184/301 (61%), Gaps = 13/301 (4%)
Query: 56 FSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEI 115
FS E+ +A++ F ++N++GRGG+ +VYKG L DG +AVKRL + T E +F TE+
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQG-GELQFQTEV 78
Query: 116 GTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDV--NSPGVEWKVRHKIAV 172
I H N+L L G C+ L++ + + GSVAS + + P ++W R +IA+
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
G+ARGL YLH C +IIHRD+K++NILL +FE + DFGLAK + + H A + G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRG 197
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS------LHSWAKPILN 286
GH+APEY G EKTDVF +GV LLE+I+G++ D + + L W K +L
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 287 QGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLEGDQIDKERW 346
+ ++E LVD LQG Y ++ +L A LC ++SP RP MSEV+ MLEGD + ERW
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR-MLEGDGL-AERW 315
Query: 347 K 347
+
Sbjct: 316 E 316
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 162/276 (58%), Gaps = 12/276 (4%)
Query: 64 ATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
ATN F + L+G G + +VYKGVL+DG ++A+KR T + +EF TEI T+ H
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP--ESSQGIEEFETEIETLSFCRH 94
Query: 124 PNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFH--DVNSPGVEWKVRHKIAVGTARGLHY 180
P+++SL+G C + N + LI+++ G++ + D+ + + W+ R +I +G ARGLHY
Sbjct: 95 PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPE 240
LH R IIHRD+KS NILL +F P+I+DFG++K H ++GT G++ PE
Sbjct: 155 LH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPE 211
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGS----HQSLHSWAKPILNQGEIEKLVDP 296
YF+ G + EK+DV++FGV L E++ R + S +L WA N G++E++VDP
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271
Query: 297 RLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
L L + A C+ S RP+M +VL
Sbjct: 272 NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 162/276 (58%), Gaps = 12/276 (4%)
Query: 64 ATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
ATN F + L+G G + +VYKGVL+DG ++A+KR T + +EF TEI T+ H
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP--ESSQGIEEFETEIETLSFCRH 94
Query: 124 PNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFH--DVNSPGVEWKVRHKIAVGTARGLHY 180
P+++SL+G C + N + LI+++ G++ + D+ + + W+ R +I +G ARGLHY
Sbjct: 95 PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPE 240
LH R IIHRD+KS NILL +F P+I+DFG++K H ++GT G++ PE
Sbjct: 155 LH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPE 211
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGS----HQSLHSWAKPILNQGEIEKLVDP 296
YF+ G + EK+DV++FGV L E++ R + S +L WA N G++E++VDP
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271
Query: 297 RLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
L L + A C+ S RP+M +VL
Sbjct: 272 NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 19/304 (6%)
Query: 47 ETTKPTWRCFSFEEISIATNAFSSE------NLVGRGGYAEVYKGVLQDGEEIAVKRLTK 100
E + + FSF E+ TN F N +G GG+ VYKG + + +AVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAA 64
Query: 101 VV--TDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDV 157
+V T + +++F EI + H N++ LLG D + L L++ + GS+ +
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 158 N-SPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
+ +P + W +R KIA G A G+++LH + IHRDIKS+NILL F +ISDFGLA+
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 217 WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
+ I GT ++APE + G + K+D+++FGV LLEII+G VD +
Sbjct: 182 ASEKFAQTVMXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 277 ---LHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L + + IE +D ++ A D T + + AS C+ RP + +V +
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 334 VMLE 337
++ E
Sbjct: 300 LLQE 303
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 19/304 (6%)
Query: 47 ETTKPTWRCFSFEEISIATNAFSSE------NLVGRGGYAEVYKGVLQDGEEIAVKRLTK 100
E + + FSF E+ TN F N +G GG+ VYKG + + +AVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAA 64
Query: 101 VV--TDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDV 157
+V T + +++F EI + H N++ LLG D + L L++ + GS+ +
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 158 N-SPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
+ +P + W +R KIA G A G+++LH+ IHRDIKS+NILL F +ISDFGLA+
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 217 WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
I GT ++APE + G + K+D+++FGV LLEII+G VD +
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 277 ---LHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L + + IE +D ++ A D T + + AS C+ RP + +V +
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 334 VMLE 337
++ E
Sbjct: 300 LLQE 303
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 154/298 (51%), Gaps = 19/298 (6%)
Query: 53 WRCFSFEEISIATNAFSSE------NLVGRGGYAEVYKGVLQDGEEIAVKRLTKVV--TD 104
+ FSF E+ TN F N +G GG+ VYKG + + +AVK+L +V T
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 64
Query: 105 DRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVN-SPGV 162
+ +++F EI + H N++ LLG D + L L++ + GS+ ++ +P +
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 163 EWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW 222
W +R KIA G A G+++LH + IHRDIKS+NILL F +ISDFGLA+
Sbjct: 125 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS---LHS 279
I GT ++APE + G + K+D+++FGV LLEII+G VD + L
Sbjct: 182 QXVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 240
Query: 280 WAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLE 337
+ + IE +D ++ A D T + + AS C+ RP + +V +++ E
Sbjct: 241 KEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 149/298 (50%), Gaps = 19/298 (6%)
Query: 53 WRCFSFEEISIATNAFSSE------NLVGRGGYAEVYKGVLQDGEEIAVKRLTKVV--TD 104
+ FSF E+ TN F N G GG+ VYKG + + +AVK+L +V T
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 105 DRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVN-SPGV 162
+ +++F EI H N++ LLG D + L L++ + GS+ ++ +P +
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 163 EWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW 222
W R KIA G A G+++LH + IHRDIKS+NILL F +ISDFGLA+
Sbjct: 122 SWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS---LHS 279
+ I GT + APE + G + K+D+++FGV LLEII+G VD + L
Sbjct: 179 QXVXXSRIVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 237
Query: 280 WAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLE 337
+ + IE +D + A D T + AS C+ RP + +V +++ E
Sbjct: 238 KEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 139/275 (50%), Gaps = 39/275 (14%)
Query: 71 ENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
E +VGRG + V K + +++A+K+ + + + K F+ E+ + V HPN++ L
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQ----IESESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIA--VGTARGLHYLHKGCQRR 188
G C+ N + L+ +++ GS+ ++ H P + H ++ + ++G+ YLH +
Sbjct: 69 GACL-NPVCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 189 IIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
+IHRD+K N+LL A +I DFG A + + T++ +G+ +APE F
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAPEVFEGSNY 181
Query: 248 DEKTDVFAFGVFLLEIISGRKPVD--GSHQ-----SLHSWAKPILNQGEIEKLVDPRLQG 300
EK DVF++G+ L E+I+ RKP D G ++H+ +P L I+ L P
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL----IKNLPKP---- 233
Query: 301 AYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
+ + C P+ RP+M E++++M
Sbjct: 234 ---------IESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 138/275 (50%), Gaps = 39/275 (14%)
Query: 71 ENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
E +VGRG + V K + +++A+K+ + + + K F+ E+ + V HPN++ L
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQ----IESESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIA--VGTARGLHYLHKGCQRR 188
G C+ N + L+ +++ GS+ ++ H P + H ++ + ++G+ YLH +
Sbjct: 68 GACL-NPVCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 189 IIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
+IHRD+K N+LL A +I DFG A + + T++ +G+ +APE F
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMAPEVFEGSNY 180
Query: 248 DEKTDVFAFGVFLLEIISGRKPVD-------GSHQSLHSWAKPILNQGEIEKLVDPRLQG 300
EK DVF++G+ L E+I+ RKP D ++H+ +P L I+ L P
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL----IKNLPKP---- 232
Query: 301 AYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
+ + C P+ RP+M E++++M
Sbjct: 233 ---------IESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 21/273 (7%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F E +GRG ++EVY+ L DG +A+K++ + D + + + EI + + HPN
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 126 VLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPG--VEWKVRHKIAVGTARGLHYLH 182
V+ + DN L ++ + + G ++ + + + K V L ++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEY 241
RR++HRDIK +N+ +TA ++ D GL ++ S+ T HS+ GT +++PE
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV---GTPYYMSPER 207
Query: 242 FMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGA 301
+ K+D+++ G L E+ + + P G +L+S K +IE+ P L
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK------KIEQCDYPPLPSD 261
Query: 302 YDVTQLNRLAFAASLCIRASPTWRPTMSEVLEV 334
+ +L +L ++CI P RP ++ V +V
Sbjct: 262 HYSEELRQL---VNMCINPDPEKRPDVTYVYDV 291
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 37/225 (16%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEIAVKR--------LTKVVTDDRKEKEFLTEIGTIG 119
+ E ++G GG+ +VY+ G+E+AVK +++ + + R+E + +
Sbjct: 9 LTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK--- 64
Query: 120 HVCHPNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPG---VEWKVRHKIAVGTA 175
HPN+++L G C+ + L L+ +F+ G + + P V W AV A
Sbjct: 65 ---HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIA 115
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEP--------QISDFGLAKWLPSQWTHHSI 227
RG++YLH IIHRD+KSSNIL+ E +I+DFGLA+ +W +
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTK 171
Query: 228 APIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
G + +APE + + +DV+++GV L E+++G P G
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 15/202 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRH--KIAVGTARGLHYLHKGCQRRIIH 191
L ++ Q+ GS SL+H +++ +++++ IA TARG+ YLH + IIH
Sbjct: 78 TKPQLAIVTQWCE-GS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIH 131
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE- 249
RD+KS+NI L D +I DFGLA + S+W+ H + G+ +APE +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 250 --KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP 212
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V++ G ++AVK L + + EFL E+ + + HPN++ +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 134 VDN-GLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
L ++ ++ SRGS+ L H + ++ + R +A A+G++YLH I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVH 162
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
RD+KS N+L+ + ++ DFGL++ S + A GT +APE +EK+
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA--AGTPEWMAPEVLRDEPSNEKS 220
Query: 252 DVFAFGVFLLEIISGRKP 269
DV++FGV L E+ + ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 15/202 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRH--KIAVGTARGLHYLHKGCQRRIIH 191
L ++ Q+ GS SL+H +++ +++++ IA TARG+ YLH + IIH
Sbjct: 90 TKPQLAIVTQWCE-GS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIH 143
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE- 249
RD+KS+NI L D +I DFGLA S+W+ H + G+ +APE +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 250 --KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 195
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV+AFGV L EI + G P G
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 190
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 238
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 190
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 238
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 15/202 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRH--KIAVGTARGLHYLHKGCQRRIIH 191
L ++ Q+ GS SL+H +++ +++++ IA TARG+ YLH + IIH
Sbjct: 90 TAPQLAIVTQWCE-GS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIH 143
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE- 249
RD+KS+NI L D +I DFGLA S+W+ H + G+ +APE +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 250 --KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 147
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 203
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 251
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 252 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 295
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 190
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 238
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 195
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV+AFGV L EI + G P G
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 195
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 243
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 287
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 190
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 238
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 195
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 243
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 287
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 190
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV+AFGV L EI + G P G
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 136
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 192
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 240
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 284
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 138
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 194
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV+AFGV L EI + G P G
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYPG 219
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 136
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 192
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 240
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 284
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V++ G ++AVK L + + EFL E+ + + HPN++ +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 134 VDN-GLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
L ++ ++ SRGS+ L H + ++ + R +A A+G++YLH I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVH 162
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
R++KS N+L+ + ++ DFGL++ S + A GT +APE +EK+
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--AGTPEWMAPEVLRDEPSNEKS 220
Query: 252 DVFAFGVFLLEIISGRKP 269
DV++FGV L E+ + ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 144/302 (47%), Gaps = 35/302 (11%)
Query: 56 FSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTE 114
S ++ + + ++ +G G Y EVY+GV + +AVK L + D + +EFL E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKE 57
Query: 115 IGTIGHVCHPNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG 173
+ + HPN++ LLG C + Y+I +F + G++ + N V V +A
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PI 230
+ + YL K + IHRD+ + N L+ + +++DFGL++ + +T H+ A PI
Sbjct: 118 ISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI 174
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+ T APE + K+DV+AFGV L EI + G P G ++ +
Sbjct: 175 KWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------------IDPSQ 218
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQID 342
+ +L++ + ++ C + +P+ RP+ +E+ E M + D+++
Sbjct: 219 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 278
Query: 343 KE 344
KE
Sbjct: 279 KE 280
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 134
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 190
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV+AFGV L EI + G P G
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 135
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + T H+ A PI+ T APE +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYNKFS 191
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 239
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 283
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 132
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + T H+ A PI+ T APE +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYNKFS 188
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV+AFGV L EI + G P G
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 40/294 (13%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKG-VLQDGEEIAVKRLTKVVTDDRKE-------KEFLT 113
++A N E +G+GG+ V+KG +++D +A+K L ++ D E +EF
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL--ILGDSEGETEMIEKFQEFQR 72
Query: 114 EIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG 173
E+ + ++ HPN++ L G + N ++ +F G + D P ++W V+ ++ +
Sbjct: 73 EVFIMSNLNHPNIVKLYG-LMHNPPRMVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLD 130
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILL-----TADFEPQISDFGLAKWLPSQWTHHSIA 228
A G+ Y+ + I+HRD++S NI L A +++DFGL SQ + HS++
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-----SQQSVHSVS 184
Query: 229 PIEGTFGHLAPEYF--MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILN 286
+ G F +APE EK D ++F + L I++G P D + I
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
Query: 287 QG---EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLE 337
+G I + PRL+ + LC P RP S +++ + E
Sbjct: 245 EGLRPTIPEDCPPRLRNVIE------------LCWSGDPKKRPHFSYIVKELSE 286
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 139
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + T H+ A PI+ T APE +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYNKFS 195
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV+AFGV L EI + G P G
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 29/281 (10%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 135
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
RD+ + N L+ + +++DFGL++ + T+ + A + APE + K+
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 252 DVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
DV+AFGV L EI + G P G ++ ++ +L++ + ++
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCPEKV 242
Query: 311 AFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 243 YELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 283
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIH 341
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
R++ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 397
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 445
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 446 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 489
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 77
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 238
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 29/281 (10%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 136
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
RD+ + N L+ + +++DFGL++ + T+ + A + APE + K+
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 252 DVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
DV+AFGV L EI + G P G ++ ++ +L++ + ++
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCPEKV 243
Query: 311 AFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 244 YELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 284
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 76
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 134
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 135 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 237
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 78
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 239
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 76
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 134
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 135 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 237
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 134
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA + S+W+ H + G+ +APE +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 75
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 133
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 134 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 156
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA + S+W+ H + G+ +APE +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 216 QSDVYAFGIVLYELMTGQLP 235
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 131
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA + S+W+ H + G+ +APE +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 191 QSDVYAFGIVLYELMTGQLP 210
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 79
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 137
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 138 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 240
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 157
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA + S+W+ H + G+ +APE +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 217 QSDVYAFGIVLYELMTGQLP 236
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 129
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA + S+W+ H + G+ +APE +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 134
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA + S+W+ H + G+ +APE +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 338
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
R++ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 394
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 442
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 443 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 486
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 129
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA + S+W+ H + G+ +APE +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY+GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C + Y+I +F + G++ + N V V +A + + YL K + IH
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIH 380
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
R++ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNKFS 436
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
K+DV+AFGV L EI + G P G ++ ++ +L++ +
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPYPG------------IDLSQVYELLEKDYRMERPEGCP 484
Query: 308 NRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQIDKE 344
++ C + +P+ RP+ +E+ E M + D+++KE
Sbjct: 485 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 528
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 75
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 236
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 78
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 136
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 137 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 239
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 85
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 143
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 144 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 246
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 69
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 129 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 230
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 78
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 78
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 136
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 137 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 75
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 236
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 75
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 236
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 82
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 243
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 100
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 159
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 160 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 261
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 143/302 (47%), Gaps = 35/302 (11%)
Query: 56 FSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTE 114
S ++ + + ++ +G G + EVY+GV + +AVK L + D + +EFL E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKE 57
Query: 115 IGTIGHVCHPNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG 173
+ + HPN++ LLG C + Y+I +F + G++ + N V V +A
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PI 230
+ + YL K + IHRD+ + N L+ + +++DFGL++ + T H+ A PI
Sbjct: 118 ISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+ T APE + K+DV+AFGV L EI + G P G ++ +
Sbjct: 175 KWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------------IDPSQ 218
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEV---LEVMLE----GDQID 342
+ +L++ + ++ C + +P+ RP+ +E+ E M + D+++
Sbjct: 219 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 278
Query: 343 KE 344
KE
Sbjct: 279 KE 280
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 81
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 141 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 242
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y EVY GV + +AVK L + D + +EFL E + + HPN++ LLG
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
C ++ Y++ ++ G++ + N V V +A + + YL K + IH
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK---KNFIH 153
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIA--PIEGTFGHLAPEYFMHGIVD 248
RD+ + N L+ + +++DFGL++ + +T H+ A PI+ T APE +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYNTFS 209
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV+AFGV L EI + G P G
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPYPG 234
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 77
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 238
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 149
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA S+W+ H + G+ +APE +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATE-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 209 QSDVYAFGIVLYELMTGQLP 228
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 129
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA S+W+ H + G+ +APE +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATE-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L ++ + F E+G + H N+L +G
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
L ++ Q+ S+ H + + K+ IA TA+G+ YLH + IIHRD
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHA---KSIIHRD 157
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFMHGIVDE--- 249
+KS+NI L D +I DFGLA S+W+ H + G+ +APE +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATE-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+AFG+ L E+++G+ P
Sbjct: 217 QSDVYAFGIVLYELMTGQLP 236
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKG-VLQDGEEIAVKRLTKVVTDDRKE-------KEFLT 113
++A N E +G+GG+ V+KG +++D +A+K L ++ D E +EF
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL--ILGDSEGETEMIEKFQEFQR 72
Query: 114 EIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG 173
E+ + ++ HPN++ L G + N ++ +F G + D P ++W V+ ++ +
Sbjct: 73 EVFIMSNLNHPNIVKLYG-LMHNPPRMVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLD 130
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILL-----TADFEPQISDFGLAKWLPSQWTHHSIA 228
A G+ Y+ + I+HRD++S NI L A +++DFG SQ + HS++
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGT-----SQQSVHSVS 184
Query: 229 PIEGTFGHLAPEYF--MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILN 286
+ G F +APE EK D ++F + L I++G P D + I
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
Query: 287 QG---EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLE 337
+G I + PRL+ + LC P RP S +++ + E
Sbjct: 245 EGLRPTIPEDCPPRLRNVIE------------LCWSGDPKKRPHFSYIVKELSE 286
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKG-VLQDGEEIAVKRLTKVVTDDRKE-------KEFLT 113
++A N E +G+GG+ V+KG +++D +A+K L ++ D E +EF
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL--ILGDSEGETEMIEKFQEFQR 72
Query: 114 EIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG 173
E+ + ++ HPN++ L G + N ++ +F G + D P ++W V+ ++ +
Sbjct: 73 EVFIMSNLNHPNIVKLYG-LMHNPPRMVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLD 130
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILL-----TADFEPQISDFGLAKWLPSQWTHHSIA 228
A G+ Y+ + I+HRD++S NI L A +++DF L SQ + HS++
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL-----SQQSVHSVS 184
Query: 229 PIEGTFGHLAPEYF--MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILN 286
+ G F +APE EK D ++F + L I++G P D + I
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
Query: 287 QG---EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLE 337
+G I + PRL+ + LC P RP S +++ + E
Sbjct: 245 EGLRPTIPEDCPPRLRNVIE------------LCWSGDPKKRPHFSYIVKELSE 286
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 72
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A G++YL
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 132 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 49/289 (16%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D K K++ D EK+ ++E+ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW--------------KVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E+ K
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A ARG+ YL ++ IHRD+ + N+L+T D +I+DFGLA+ + HH
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDXXK 207
Query: 231 EGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPI 284
+ T G L APE I ++DV++FGV L EI + G P G + K +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFK-L 264
Query: 285 LNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L +G R+ + T N L C A P+ RPT +++E
Sbjct: 265 LKEGH-------RMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 49/289 (16%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D K K++ D EK+ ++E+ + + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW--------------KVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E+ K
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A ARG+ YL ++ IHRD+ + N+L+T D +I+DFGLA+ + HH
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDYYK 192
Query: 231 EGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPI 284
+ T G L APE I ++DV++FGV L EI + G P G + K +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFK-L 249
Query: 285 LNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L +G R+ + T N L C A P+ RPT +++E
Sbjct: 250 LKEGH-------RMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVE 289
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 53/291 (18%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D K K++ D EK+ ++E+ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW--------------KVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E+ K
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A ARG+ YL ++ IHRD+ + N+L+T D +I+DFGLA+ + HH
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDYYK 207
Query: 231 EGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPI 284
+ T G L APE I ++DV++FGV L EI + G P G P+
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV---------PV 258
Query: 285 LNQGEIEKLVDP--RLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
E+ KL+ R+ + T N L C A P+ RPT +++E
Sbjct: 259 ---EELFKLLKEGHRMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 49/289 (16%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D K K++ D EK+ ++E+ + + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW--------------KVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E+ K
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A ARG+ YL ++ IHRD+ + N+L+T D +I+DFGLA+ + HH
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDYYK 196
Query: 231 EGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPI 284
+ T G L APE I ++DV++FGV L EI + G P G + K +
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFK-L 253
Query: 285 LNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L +G R+ + T N L C A P+ RPT +++E
Sbjct: 254 LKEGH-------RMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVE 293
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 49/289 (16%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D K K++ D EK+ ++E+ + + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW--------------KVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E+ K
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A ARG+ YL ++ IHRD+ + N+L+T D +I+DFGLA+ + HH
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDYYK 200
Query: 231 EGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPI 284
+ T G L APE I ++DV++FGV L EI + G P G + K +
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFK-L 257
Query: 285 LNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L +G R+ + T N L C A P+ RPT +++E
Sbjct: 258 LKEGH-------RMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVE 297
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 119/229 (51%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++ G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 82
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 140
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 141 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 243
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 119/229 (51%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 79
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 137
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFG AK L ++ + + +A E
Sbjct: 138 E---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 53/291 (18%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D K K++ D EK+ ++E+ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW--------------KVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E+ K
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A ARG+ YL ++ IHRD+ + N+L+T D +I+DFGLA+ + HH
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDYYK 207
Query: 231 EGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPI 284
+ T G L APE I ++DV++FGV L EI + G P G P+
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV---------PV 258
Query: 285 LNQGEIEKLVDP--RLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
E+ KL+ R+ + T N L C A P+ RPT +++E
Sbjct: 259 ---EELFKLLKEGHRMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 49/289 (16%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D K K++ D EK+ ++E+ + + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW--------------KVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E+ K
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A ARG+ YL ++ IHRD+ + N+L+T D +I+DFGLA+ + HH
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDYYK 199
Query: 231 EGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPI 284
+ T G L APE I ++DV++FGV L EI + G P G + K +
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFK-L 256
Query: 285 LNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L +G R+ + T N L C A P+ RPT +++E
Sbjct: 257 LKEGH-------RMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVE 296
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 49/289 (16%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D K K++ D EK+ ++E+ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW--------------KVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E+ K
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A ARG+ YL ++ IHRD+ + N+L+T D +I+DFGLA+ + HH
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDYYK 207
Query: 231 EGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPI 284
+ T G L APE I ++DV++FGV L EI + G P G + K +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFK-L 264
Query: 285 LNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L +G R+ + T N L C A P+ RPT +++E
Sbjct: 265 LKEGH-------RMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 77
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFG AK L ++ + + +A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 238
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 49/289 (16%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D K K++ D EK+ ++E+ + + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW--------------KVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E+ K
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A ARG+ YL ++ IHRD+ + N+L+T D +I+DFGLA+ + HH
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HHIDYYK 248
Query: 231 EGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPI 284
+ T G L APE I ++DV++FGV L EI + G P G + K +
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFK-L 305
Query: 285 LNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L +G R+ + T N L C A P+ RPT +++E
Sbjct: 306 LKEGH-------RMDKPSNCT--NELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 77
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFG AK L ++ + + +A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 238
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 119/229 (51%), Gaps = 16/229 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+ L + T + KE L E + V
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREA-TSPKANKEILDEAYVMASVD 109
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYL 181
+P+V LLG C+ + + LI Q G + + ++ G ++ + V A+G++YL
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKGMNYL 167
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 168 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 224
Query: 242 FMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 270
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++ G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 75
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 236
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKEKE-FLTEIGT 117
+I ++ + + ++G+G + EV + +D G+E AVK ++K + +KE L E+
Sbjct: 28 AIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 85
Query: 118 IGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKV-RHKIAVGTA 175
+ + HPN++ L D G YL+ + + G LF ++ S +V +I
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE---LFDEIISRKRFSEVDAARIIRQVL 142
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILL---TADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
G+ Y+HK +I+HRD+K N+LL + D +I DFGL+ + + G
Sbjct: 143 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS---KKMKDKIG 196
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEK 292
T ++APE +HG DEK DV++ GV L ++SG P +G+ N+ +I K
Sbjct: 197 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA------------NEYDILK 243
Query: 293 LVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTM 328
V+ + + +++ Q +++ +A IR T+ P+M
Sbjct: 244 KVE-KGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 278
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++ G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 82
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFGLAK L ++ + + +A E
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 243
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 77
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFG AK L ++ + + +A E
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 238
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 82
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFG AK L ++ + + +A E
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 243
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEI----AVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
F ++G G + VYKG+ + +GE++ A+K L + T + KE L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVD 75
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
+P+V LLG C+ + + LI Q G + + + + + V A+G++YL
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
RR++HRD+ + N+L+ +I+DFG AK L ++ + + +A E
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+H I ++DV+++GV + E+++ G KP DG S S IL +GE
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGE 236
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKEKE-FLTEIGT 117
+I ++ + + ++G+G + EV + +D G+E AVK ++K + +KE L E+
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 118 IGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKV-RHKIAVGTA 175
+ + HPN++ L D G YL+ + + G LF ++ S +V +I
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE---LFDEIISRKRFSEVDAARIIRQVL 136
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILL---TADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
G+ Y+HK +I+HRD+K N+LL + D +I DFGL+ + + G
Sbjct: 137 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS---KKMKDKIG 190
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEK 292
T ++APE +HG DEK DV++ GV L ++SG P +G+ N+ +I K
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA------------NEYDILK 237
Query: 293 LVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTM 328
V+ + + +++ Q +++ +A IR T+ P+M
Sbjct: 238 KVE-KGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 272
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 275
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 276 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 275
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 276 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 23/268 (8%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
F+ +G+G + EV+KG+ +++ ++ + + + ++ EI + P V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 128 SLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ 186
G + D L++I ++ GS L P E ++ I +GL YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIA-TILREILKGLDYLH---S 142
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPEYFMHG 245
+ IHRDIK++N+LL+ E +++DFG+A L +Q ++ GT +APE
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAPEVIKQS 199
Query: 246 IVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVT 305
D K D+++ G+ +E+ G P H LH L I K P L+G Y
Sbjct: 200 AYDSKADIWSLGITAIELARGEPP----HSELHPMKVLFL----IPKNNPPTLEGNYS-- 249
Query: 306 QLNRLAFAASLCIRASPTWRPTMSEVLE 333
L C+ P++RPT E+L+
Sbjct: 250 --KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 23/268 (8%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
F+ +G+G + EV+KG+ +++ ++ + + + ++ EI + P V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 128 SLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ 186
G + D L++I ++ GS L P E ++ I +GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIA-TILREILKGLDYLH---S 122
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPEYFMHG 245
+ IHRDIK++N+LL+ E +++DFG+A L +Q ++ GT +APE
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAPEVIKQS 179
Query: 246 IVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVT 305
D K D+++ G+ +E+ G P H LH L I K P L+G Y
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP----HSELHPMKVLFL----IPKNNPPTLEGNYS-- 229
Query: 306 QLNRLAFAASLCIRASPTWRPTMSEVLE 333
L C+ P++RPT E+L+
Sbjct: 230 --KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 275
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 276 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKEKE-FLTEIGT 117
+I ++ + + ++G+G + EV + +D G+E AVK ++K + +KE L E+
Sbjct: 45 AIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 102
Query: 118 IGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKV-RHKIAVGTA 175
+ + HPN++ L D G YL+ + + G LF ++ S +V +I
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE---LFDEIISRKRFSEVDAARIIRQVL 159
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILL---TADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
G+ Y+HK +I+HRD+K N+LL + D +I DFGL+ + + G
Sbjct: 160 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS---KKMKDKIG 213
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEK 292
T ++APE +HG DEK DV++ GV L ++SG P +G+ N+ +I K
Sbjct: 214 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA------------NEYDILK 260
Query: 293 LVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTM 328
V+ + + +++ Q +++ +A IR T+ P+M
Sbjct: 261 KVE-KGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 295
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 49/289 (16%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPS----QWTHHS 226
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + + T +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 227 IAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPI 284
P++ +APE + ++DV++FGV + EI + G P G + L +
Sbjct: 220 RLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----L 271
Query: 285 LNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L +G R+ + T N L C A P+ RPT +++E
Sbjct: 272 LKEGH-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 21/267 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
F+ +G+G + EV+KG+ +++ ++ + + + ++ EI + P V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 128 SLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ 186
G + D L++I ++ GS L P E ++ I +GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIA-TILREILKGLDYLH---S 122
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+ IHRDIK++N+LL+ E +++DFG+A L + GT +APE
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSA 180
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
D K D+++ G+ +E+ G P H LH L I K P L+G Y
Sbjct: 181 YDSKADIWSLGITAIELARGEPP----HSELHPMKVLFL----IPKNNPPTLEGNYS--- 229
Query: 307 LNRLAFAASLCIRASPTWRPTMSEVLE 333
L C+ P++RPT E+L+
Sbjct: 230 -KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 21/267 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
F+ +G+G + EV+KG+ +++ ++ + + + ++ EI + P V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 128 SLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ 186
G + D L++I ++ GS L P E ++ I +GL YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIA-TILREILKGLDYLH---S 137
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+ IHRDIK++N+LL+ E +++DFG+A L + GT +APE
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSA 195
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
D K D+++ G+ +E+ G P H LH L I K P L+G Y
Sbjct: 196 YDSKADIWSLGITAIELARGEPP----HSELHPMKVLFL----IPKNNPPTLEGNYS--- 244
Query: 307 LNRLAFAASLCIRASPTWRPTMSEVLE 333
L C+ P++RPT E+L+
Sbjct: 245 -KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKEKE-FLTEIGT 117
+I ++ + + ++G+G + EV + +D G+E AVK ++K + +KE L E+
Sbjct: 46 AIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 103
Query: 118 IGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKV-RHKIAVGTA 175
+ + HPN++ L D G YL+ + + G LF ++ S +V +I
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE---LFDEIISRKRFSEVDAARIIRQVL 160
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILL---TADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
G+ Y+HK +I+HRD+K N+LL + D +I DFGL+ + + G
Sbjct: 161 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS---KKMKDKIG 214
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEK 292
T ++APE +HG DEK DV++ GV L ++SG P +G+ N+ +I K
Sbjct: 215 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA------------NEYDILK 261
Query: 293 LVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTM 328
V+ + + +++ Q +++ +A IR T+ P+M
Sbjct: 262 KVE-KGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 296
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 267
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 268 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
++ LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 275
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 276 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I ++S+G++ PG+E+ ++ K V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 275
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 276 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ RG V ++ + + + A L Y H +R+I
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEGRMHDEK 191
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 242
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 243 -----SRLLKHNPSQRPMLREVLE 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 264
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 265 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 262
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 263 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 49/289 (16%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVE--------------WKVRHKI 170
+++LLG C +G LY+I +++S+G++ PG+E +K
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPS----QWTHHS 226
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + + T +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 227 IAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPI 284
P++ +APE + ++DV++FGV + EI + G P G + L +
Sbjct: 220 RLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----L 271
Query: 285 LNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
L +G R+ + T N L C A P+ RPT +++E
Sbjct: 272 LKEGH-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 321
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 322 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD EK+ ++E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I ++S+G++ PG+E+ ++ K V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 275
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 276 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 41/285 (14%)
Query: 74 VGRGGYAEVYK----GVLQDGEEIAVKRLTKVVTDDRKEKEF---LTEIGTIGHVC-HPN 125
+G G + +V G+ +D + AV K++ DD E++ ++E+ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 126 VLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEW----------KVRHKIAVGT 174
+++LLG C +G LY+I +++S+G++ PG+E+ ++ K V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 175 ----ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
ARG+ YL ++ IHRD+ + N+L+T + +I+DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAKPILNQG 288
+APE + ++DV++FGV + EI + G P G + L +L +G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEG 275
Query: 289 EIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
R+ + T N L C A P+ RPT +++E
Sbjct: 276 H-------RMDKPANCT--NELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 9/206 (4%)
Query: 72 NLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEK---EFLTEIGTIGHVCHPNVL 127
++G G + VYKG+ + +GE + + K++ + K EF+ E + + HP+++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 128 SLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
LLG C+ + L+ Q G + H+ + + ++ V A+G+ YL +R
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVHE-HKDNIGSQLLLNWCVQIAKGMMYLE---ER 136
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
R++HRD+ + N+L+ + +I+DFGLA+ L ++ + +A E +
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 248 DEKTDVFAFGVFLLEIIS-GRKPVDG 272
++DV+++GV + E+++ G KP DG
Sbjct: 197 THQSDVWSYGVTIWELMTFGGKPYDG 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ RG V ++ + + + A L Y H +R+I
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEK 191
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+ ++R
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDL--ISR 244
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
L ++ +P+ RP + EVLE
Sbjct: 245 L-------LKHNPSQRPMLREVLE 261
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 9/206 (4%)
Query: 72 NLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEK---EFLTEIGTIGHVCHPNVL 127
++G G + VYKG+ + +GE + + K++ + K EF+ E + + HP+++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 128 SLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
LLG C+ + L+ Q G + H+ + + ++ V A+G+ YL +R
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHE-HKDNIGSQLLLNWCVQIAKGMMYLE---ER 159
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
R++HRD+ + N+L+ + +I+DFGLA+ L ++ + +A E +
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 248 DEKTDVFAFGVFLLEIIS-GRKPVDG 272
++DV+++GV + E+++ G KP DG
Sbjct: 220 THQSDVWSYGVTIWELMTFGGKPYDG 245
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 133
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS A + GT +L PE + DEK
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRMHDEK 189
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+ ++R
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDL--ISR 242
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
L ++ +P+ RP + EVLE
Sbjct: 243 L-------LKHNPSQRPMLREVLE 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 130
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS A + GT +L PE + DEK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 237
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 238 -----SRLLKHNPSQRPMLREVLE 256
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 131
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTLSGTLDYLPPEMIEGRMHDEK 187
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 238
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 239 -----SRLLKHNPSQRPMLREVLE 257
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 27/239 (11%)
Query: 38 ENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKR 97
+ + V C S + W ++E I + E +G G + EV+ ++AVK
Sbjct: 157 QKLSVPCMSSKPQKPWEKDAWE---IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKT 213
Query: 98 LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDV 157
+ + FL E + + H ++ L +Y+I +F ++GS+
Sbjct: 214 MK---PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSD 270
Query: 158 NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKW 217
+ A G+ ++ QR IHRD++++NIL++A +I+DFGLA+
Sbjct: 271 EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARV 327
Query: 218 ---LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
P +WT APE G K+DV++FG+ L+EI++ GR P G
Sbjct: 328 GAKFPIKWT--------------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 372
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 147
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEK 203
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 204 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 254
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 255 -----SRLLKHNPSQRPMLREVLE 273
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 17/239 (7%)
Query: 38 ENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKR 97
+ + V C S + W ++E I + E +G G + EV+ ++AVK
Sbjct: 163 QKLSVPCMSSKPQKPWEKDAWE---IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKT 219
Query: 98 LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDV 157
+ + FL E + + H ++ L +Y+I +F ++GS+
Sbjct: 220 MK---PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSD 276
Query: 158 NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKW 217
+ A G+ ++ QR IHRD++++NIL++A +I+DFGLA+
Sbjct: 277 EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARV 333
Query: 218 LP-SQWTHHSIA--PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
+ +++T A PI+ T APE G K+DV++FG+ L+EI++ GR P G
Sbjct: 334 IEDNEYTAREGAKFPIKWT----APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY ++ + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 132 CCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D+ +YLI +++ G+V ++ + + + A L Y H +++I
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKKVI 130
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS A + GT +L PE + DEK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ +E D +GA D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEAN-----TYQDTYKRISRVEFTFPDFVTEGARDLI---- 237
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 238 -----SRLLKHNPSQRPMLREVLE 256
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEK 191
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+ ++R
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDL--ISR 244
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
L ++ +P+ RP + EVLE
Sbjct: 245 L-------LKHNPSQRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 133
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+ ++R
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDL--ISR 242
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
L ++ +P+ RP + EVLE
Sbjct: 243 L-------LKHNPSQRPMLREVLE 259
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 156
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEK 212
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+ ++R
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDL--ISR 265
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
L ++ +P+ RP + EVLE
Sbjct: 266 L-------LKHNPSQRPMLREVLE 282
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 131
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 238
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 239 -----SRLLKHNPSQRPMLREVLE 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 132
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTLDYLPPEMIEGRMHDEK 188
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 239
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 240 -----SRLLKHNPSQRPMLREVLE 258
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHDEK 191
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 242
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 243 -----SRLLKHNPSQRPMLREVLE 261
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 139/276 (50%), Gaps = 36/276 (13%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKEKE-FLTEIGT 117
+I ++ + + ++G+G + EV + +D G+E AVK ++K + +KE L E+
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 118 IGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKV-RHKIAVGTA 175
+ + HPN+ L D G YL+ + + G LF ++ S +V +I
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGE---LFDEIISRKRFSEVDAARIIRQVL 136
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILL---TADFEPQISDFGLAK-WLPSQWTHHSIAPIE 231
G+ Y HK +I+HRD+K N+LL + D +I DFGL+ + S+ I
Sbjct: 137 SGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI---- 189
Query: 232 GTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE 291
GT ++APE +HG DEK DV++ GV L ++SG P +G+ N+ +I
Sbjct: 190 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA------------NEYDIL 236
Query: 292 KLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPT 327
K V+ + + +++ Q +++ +A IR T+ P+
Sbjct: 237 KKVE-KGKYTFELPQWKKVSESAKDLIRKXLTYVPS 271
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC- 132
+G G + +VYK ++ +A ++ +++ E +++ EI + HPN++ LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLDAF 103
Query: 133 CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+N L+++ +F + G+V ++ ++ P E +++ + T L+YLH +IIHR
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ-VVCKQTLDALNYLHDN---KIIHR 159
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI-----V 247
D+K+ NIL T D + +++DFG++ + T GT +APE M
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 248 DEKTDVFAFGVFLLEIISGRKP 269
D K DV++ G+ L+E+ P
Sbjct: 218 DYKADVWSLGITLIEMAEIEPP 239
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 130
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+ ++R
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDL--ISR 239
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
L ++ +P+ RP + EVLE
Sbjct: 240 L-------LKHNPSQRPMLREVLE 256
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 130
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEMIEGRMHDEK 186
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 237
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 238 -----SRLLKHNPSQRPMLREVLE 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 156
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGTLDYLPPEMIEGRMHDEK 212
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 263
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 264 -----SRLLKHNPSQRPMLREVLE 282
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 130
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 237
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 238 -----SRLLKHNPSQRPMLREVLE 256
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 23/268 (8%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
F+ + +G+G + EVYKG+ +E+ ++ + + + ++ EI + P +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPG-VEWKVRHKIAVGTARGLHYLHKGC 185
G + + L++I ++ GS L PG +E I +GL YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLH--- 133
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
R IHRDIK++N+LL+ + +++DFG+A L + GT +APE
Sbjct: 134 SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQS 191
Query: 246 IVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVT 305
D K D+++ G+ +E+ G P H P+ I K P L+G +
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNSDLH--------PMRVLFLIPKNSPPTLEGQHS-- 241
Query: 306 QLNRLAFAASLCIRASPTWRPTMSEVLE 333
C+ P +RPT E+L+
Sbjct: 242 --KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 1 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 53
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + +++T A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 171 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 221
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 222 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 264
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 130
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHDEK 186
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 237
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 238 -----SRLLKHNPSQRPMLREVLE 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 133
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 240
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 241 -----SRLLKHNPSQRPMLREVLE 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 129
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 236
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 237 -----SRLLKHNPSQRPMLREVLE 255
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 131
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMHDEK 187
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 238
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 239 -----SRLLKHNPSQRPMLREVLE 257
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 7 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 59
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + +++T A
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 176
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 177 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 227
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 228 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 270
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 6 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 58
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 59 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + +++T A
Sbjct: 119 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 175
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 176 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 226
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 227 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 269
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 133
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 240
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 241 -----SRLLKHNPSQRPMLREVLE 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 130
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 237
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 238 -----SRLLKHNPSQRPMLREVLE 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 134
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 241
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 242 -----SRLLKHNPSQRPMLREVLE 260
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 35/291 (12%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQ-DGEEIAVKR--LTKVVTDDRKEKEFLTEIGTI 118
SI + + + ++G G A V E++A+KR L K T E L EI +
Sbjct: 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS---MDELLKEIQAM 67
Query: 119 GHVCHPNVLSLLGC-CVDNGLYLIFQFSSRGSVASLFHDVNSPG------VEWKVRHKIA 171
HPN++S V + L+L+ + S GSV + + + G ++ I
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 172 VGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPS--QWTHHSI-A 228
GL YLHK Q IHRD+K+ NILL D QI+DFG++ +L + T + +
Sbjct: 128 REVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 229 PIEGTFGHLAPEYFMHGI--VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILN 286
GT +APE M + D K D+++FG+ +E+ +G P + + + N
Sbjct: 185 TFVGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIELATGAAPYH-KYPPMKVLMLTLQN 242
Query: 287 QGEIEKLVDPRLQ-GAYDVTQLNRLAFA----ASLCIRASPTWRPTMSEVL 332
P L+ G D L + + SLC++ P RPT +E+L
Sbjct: 243 D-------PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 168
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ--WTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + ++ H+ + +A E
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 150
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ--WTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + ++ H+ + +A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 11 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 63
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 64 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + +++T A
Sbjct: 124 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 180
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 181 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 231
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 232 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 274
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 169
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ--WTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + ++ H+ + +A E
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE DEK
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEGRXHDEK 191
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+ ++R
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDL--ISR 244
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
L ++ +P+ RP + EVLE
Sbjct: 245 L-------LKHNPSQRPXLREVLE 261
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 142
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ--WTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + ++ H+ + +A E
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 26/266 (9%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + EV+ G ++AVK L + FL E + + H ++ L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
+Y+I ++ GS+ + + +A A G+ ++ +R IHRD
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 129
Query: 194 IKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAPEYFMHGIVDEK 250
++++NIL++ +I+DFGLA+ + +++T A PI+ T APE +G K
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIK 185
Query: 251 TDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNR 309
+DV++FG+ L EI++ GR P G + I N ++V P ++ QL R
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQNLERGYRMVRPD-NCPEELYQLMR 239
Query: 310 LAFAASLCIRASPTWRPTMSEVLEVM 335
LC + P RPT + V+
Sbjct: 240 ------LCWKERPEDRPTFDYLRSVL 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 130
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 237
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 238 -----SRLLKHNPSQRPMLREVLE 256
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 150
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ--WTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + ++ H+ + +A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 27/274 (9%)
Query: 64 ATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHV 121
A F +G+G + VY + + I A+K L K + E + E+ H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 122 CHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHY 180
HPN+L L G D +YLI +++ G+V ++ + + + A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSY 126
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPE 240
H +R+IHRDIK N+LL + E +I+DFG + PS + GT +L PE
Sbjct: 127 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGTLDYLPPE 179
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQ 299
+ DEK D+++ GV E + G+ P + + ++ + +E D +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTE 234
Query: 300 GAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
GA D+ S ++ +P+ RP + EVLE
Sbjct: 235 GARDLI---------SRLLKHNPSQRPMLREVLE 259
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 149
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ--WTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + ++ H+ + +A E
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 147
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ--WTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + ++ H+ + +A E
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 148
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ--WTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + ++ H+ + +A E
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 145
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ--WTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + ++ H+ + +A E
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I+DFG + PS + GT +L PE + DEK
Sbjct: 128 HRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEK 183
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 234
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 235 -----SRLLKHNPSQRPMLREVLE 253
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 130/289 (44%), Gaps = 31/289 (10%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
SI + + + ++G G A V E++A+KR+ + E L EI +
Sbjct: 6 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQ 64
Query: 121 VCHPNVLSLLGC-CVDNGLYLIFQFSSRGSVASLFHDVNSPG------VEWKVRHKIAVG 173
HPN++S V + L+L+ + S GSV + + + G ++ I
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPS--QWTHHSI-API 230
GL YLHK Q IHRD+K+ NILL D QI+DFG++ +L + T + +
Sbjct: 125 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 231 EGTFGHLAPEYFMHGI--VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQG 288
GT +APE M + D K D+++FG+ +E+ +G P + + + N
Sbjct: 182 VGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIELATGAAPYH-KYPPMKVLMLTLQND- 238
Query: 289 EIEKLVDPRLQ-GAYDVTQLNRLAFA----ASLCIRASPTWRPTMSEVL 332
P L+ G D L + + SLC++ P RPT +E+L
Sbjct: 239 ------PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 132
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I++FG + PS + GT +L PE + DEK
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEK 188
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+ ++R
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDL--ISR 241
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
L ++ +P+ RP + EVLE
Sbjct: 242 L-------LKHNPSQRPMLREVLE 258
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC- 132
+G G + +VYK ++ +A ++ +++ E +++ EI + HPN++ LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLDAF 103
Query: 133 CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+N L+++ +F + G+V ++ ++ P E +++ + T L+YLH +IIHR
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ-VVCKQTLDALNYLHDN---KIIHR 159
Query: 193 DIKSSNILLTADFEPQISDFGL-AKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI----- 246
D+K+ NIL T D + +++DFG+ AK S GT +APE M
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI---GTPYWMAPEVVMCETSKDRP 216
Query: 247 VDEKTDVFAFGVFLLEIISGRKP 269
D K DV++ G+ L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 57 SFEEISIAT-----NAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF 111
S +EI ++ F LVG G Y +VYKG ++A ++ V D+ E+E
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEI 67
Query: 112 LTEIGTIGHVCH-PNVLSLLGCCV-------DNGLYLIFQFSSRGSVASLFHDV--NSPG 161
EI + H N+ + G + D+ L+L+ +F GSV L + N+
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127
Query: 162 VEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ 221
EW I RGL +LH Q ++IHRDIK N+LLT + E ++ DFG++ L
Sbjct: 128 EEWIAY--ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182
Query: 222 WTHHSIAPIEGTFGHLAPEYFM-----HGIVDEKTDVFAFGVFLLEIISGRKPVDGSH 274
+ GT +APE D K+D+++ G+ +E+ G P+ H
Sbjct: 183 VGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA--LSYCH---SKRVI 133
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL + E +I++FG + PS + GT +L PE + DEK
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G+ P + + ++ + +E D +GA D+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEFTFPDFVTEGARDLI---- 240
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ +P+ RP + EVLE
Sbjct: 241 -----SRLLKHNPSQRPMLREVLE 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + VYKG ++AVK L V + + F E+ + H N+L +G
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
+ L ++ Q+ S+ H V + IA TA+G+ YLH + IIHRD
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLH-VQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRD 157
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEGTFGHLAPEYFM---HGIVDE 249
+KS+NI L +I DFGLA + S+W+ + G+ +APE +
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLAT-VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 250 KTDVFAFGVFLLEIISGRKP 269
++DV+++G+ L E+++G P
Sbjct: 217 QSDVYSYGIVLYELMTGELP 236
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 130/295 (44%), Gaps = 31/295 (10%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGVL--QDGE--EIAVKRLTKVVTDDRKEKEFLT 113
E++ I N ++G G + V +G L +DG ++AVK + + R+ +EFL+
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 114 EIGTIGHVCHPNVLSLLGCCVD---NGL---YLIFQFSSRGSVAS-LFHDVNSPG---VE 163
E + HPNV+ LLG C++ G+ +I F G + + L + G +
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 164 WKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWT 223
+ K V A G+ YL R +HRD+ + N +L D ++DFGL+K + S
Sbjct: 146 LQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAK 282
+ + +A E + K+DV+AFGV + EI + G P G H
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYD 260
Query: 283 PILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLE 337
+L+ RL+ D L+ L C R P RPT S VL + LE
Sbjct: 261 YLLHGH--------RLKQPEDC--LDELYEIMYSCWRTDPLDRPTFS-VLRLQLE 304
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 21/216 (9%)
Query: 73 LVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
++G+G + + K ++ GE + +K L + D+ ++ FL E+ + + HPNVL +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 132 CCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D L I ++ G++ + ++S W R A A G+ YLH II
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDS-QYPWSQRVSFAKDIASGMAYLH---SMNII 130
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH------------HSIAPIEGTFGHLA 238
HRD+ S N L+ + ++DFGLA+ + + T + G +A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 239 PEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSH 274
PE DEK DVF+FG+ L EII GR D +
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDY 225
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 2 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 54
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 55 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + ++ T A
Sbjct: 115 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 171
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 172 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 222
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 223 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 1 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 53
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + ++ T A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 171 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 221
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 222 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 3 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 55
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 56 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + ++ T A
Sbjct: 116 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 172
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 173 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 223
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 224 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 266
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKE---FLTEIGTIGHVCHPNVLSLL 130
+G G + +VYK +E +V KV+ D + E+E ++ EI + HPN++ LL
Sbjct: 45 LGDGAFGKVYKA---QNKETSVLAAAKVI-DTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 131 GC-CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+N L+++ +F + G+V ++ ++ P E +++ + T L+YLH +I
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ-VVCKQTLDALNYLHDN---KI 156
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI--- 246
IHRD+K+ NIL T D + +++DFG++ GT +APE M
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDX--FIGTPYWMAPEVVMCETSKD 214
Query: 247 --VDEKTDVFAFGVFLLEIISGRKP 269
D K DV++ G+ L+E+ P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 27/294 (9%)
Query: 46 SETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDD 105
S+T KP + + +E + +G G + EV+ G ++AVK L +
Sbjct: 2 SQTQKPQ-KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GS 57
Query: 106 RKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWK 165
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 58 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 117
Query: 166 VRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTH 224
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + ++ T
Sbjct: 118 KLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 174
Query: 225 HSIA--PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
A PI+ T APE +G K+DV++FG+ L EI++ GR P G
Sbjct: 175 REGAKFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----- 225
Query: 282 KPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
+ I N ++V P ++ QL R LC + P RPT + V+
Sbjct: 226 EVIQNLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 272
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 1 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 53
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + ++ T A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 171 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 221
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 222 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 264
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 10 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 62
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 63 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + ++ T A
Sbjct: 123 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 179
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 180 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 230
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 231 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 273
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+GRG + EV+ G L+ D +AVK + + D K K FL E + HPN++ L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 133 CVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GTARGLHYLHKGCQRRI 189
C +Y++ + G + + + G +V+ + + A G+ YL C
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTF---LRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 190 IHRDIKSSNILLTADFEPQISDFGLA--------------KWLPSQWTHHSIAPIEGTFG 235
IHRD+ + N L+T +ISDFG++ + +P +WT
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT------------ 282
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +G ++DV++FG+ L E S
Sbjct: 283 --APEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKYL---A 149
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAK--WLPSQWTHHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + H+ + +A E
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 32/269 (11%)
Query: 92 EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLSLLGCCVDNGLYLIF-QFSSRGS 149
++AVK L D KE ++E+ + H+ H N+++LLG C G L+ ++ G
Sbjct: 78 KVAVKMLKSTAHADEKEA-LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 150 VASLFHDVNSPGVEWKVRHK--------------IAVGTARGLHYLHKGCQRRIIHRDIK 195
+ + PG+E+ + A+G+ +L + IHRD+
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 193
Query: 196 SSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFA 255
+ N+LLT +I DFGLA+ + + + +APE + ++DV++
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 253
Query: 256 FGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAA 314
+G+ L EI S G P G IL + KLV Q A +
Sbjct: 254 YGILLWEIFSLGLNPYPG-----------ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIM 302
Query: 315 SLCIRASPTWRPTMSEVLEVMLEGDQIDK 343
C PT RPT ++ + E Q D+
Sbjct: 303 QACWALEPTHRPTFQQICSFLQEQAQEDR 331
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 30/290 (10%)
Query: 50 KPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEK 109
KP W +E + +G G + EV+ G ++AVK L +
Sbjct: 7 KPWWE----DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPD 59
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
FL E + + H ++ L +Y+I ++ GS+ + +
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA 228
+A A G+ ++ +R IHRD++++NIL++ +I+DFGLA+ + ++ T A
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 176
Query: 229 --PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPIL 285
PI+ T APE +G K+DV++FG+ L EI++ GR P G + I
Sbjct: 177 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQ 227
Query: 286 NQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
N ++V P ++ QL R LC + P RPT + V+
Sbjct: 228 NLERGYRMVRPD-NCPEELYQLMR------LCWKERPEDRPTFDYLRSVL 270
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+GRG + EV+ G L+ D +AVK + + D K K FL E + HPN++ L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 133 CVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GTARGLHYLHKGCQRRI 189
C +Y++ + G + + + G +V+ + + A G+ YL C
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTF---LRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 190 IHRDIKSSNILLTADFEPQISDFGLA--------------KWLPSQWTHHSIAPIEGTFG 235
IHRD+ + N L+T +ISDFG++ + +P +WT
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT------------ 282
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +G ++DV++FG+ L E S
Sbjct: 283 --APEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 26/266 (9%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + EV+ G ++AVK L + FL E + + H ++ L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
+Y+I ++ GS+ + + +A A G+ ++ +R IHR+
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRN 130
Query: 194 IKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAPEYFMHGIVDEK 250
++++NIL++ +I+DFGLA+ + +++T A PI+ T APE +G K
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIK 186
Query: 251 TDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNR 309
+DV++FG+ L EI++ GR P G + I N ++V P ++ QL R
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQNLERGYRMVRPD-NCPEELYQLMR 240
Query: 310 LAFAASLCIRASPTWRPTMSEVLEVM 335
LC + P RPT + V+
Sbjct: 241 ------LCWKERPEDRPTFDYLRSVL 260
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 34/208 (16%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G+G + +V G + G ++AVK + +D + FL E + + H N++ LLG
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVK----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 134 VD--NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
V+ GLY++ ++ ++GS+ + K ++ + YL +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 131
Query: 192 RDIKSSNILLTADFEPQISDFGLAK---------WLPSQWTHHSIAPIEGTFGHLAPEYF 242
RD+ + N+L++ D ++SDFGL K LP +WT APE
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT--------------APEAL 177
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
K+DV++FG+ L EI S GR P
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 68 FSSENLVGRGGYAEVYKG-VLQDGEEIAVKRL-TKVVTDDRKEKEFLTEIGTIGHVCHPN 125
F NL+G+G +A VY+ + G E+A+K + K + + E+ + HP+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 126 VLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+L L D N +YL+ + G + + P E + RH + G+ YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH-QIITGMLYLH-- 129
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
I+HRD+ SN+LLT + +I+DFGLA L + H + GT +++PE
Sbjct: 130 -SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYTLCGTPNYISPEIATR 186
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVD 271
++DV++ G ++ GR P D
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G G + EV+ ++AVK + + FL E + +
Sbjct: 12 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEAFLAEANVMKTLQ 68
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L +Y+I +F ++GS+ + A G+ ++
Sbjct: 69 HDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
QR IHRD++++NIL++A +I+DFGLA+ + +++T A PI+ T AP
Sbjct: 129 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT----AP 181
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E G K+DV++FG+ L+EI++ GR P G
Sbjct: 182 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 215
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 48 TTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRK 107
T+KP + + + I + E +G+G + EV+ G +A+K L
Sbjct: 166 TSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-- 223
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+ FL E + + H ++ L + +Y++ ++ S+GS+ +
Sbjct: 224 -EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHS 226
+A A G+ Y+ + +HRD++++NIL+ + +++DFGLA+ + +++T
Sbjct: 283 VDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 227 IA--PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
A PI+ T APE ++G K+DV++FG+ L E+ + GR P G
Sbjct: 340 GAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 48 TTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRK 107
T+KP + + + I + E +G+G + EV+ G +A+K L
Sbjct: 166 TSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-- 223
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+ FL E + + H ++ L + +Y++ ++ S+GS+ +
Sbjct: 224 -EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHS 226
+A A G+ Y+ + +HRD++++NIL+ + +++DFGLA+ + +++T
Sbjct: 283 VDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 227 IA--PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
A PI+ T APE ++G K+DV++FG+ L E+ + GR P G
Sbjct: 340 GAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 48 TTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRK 107
T+KP + + + I + E +G+G + EV+ G +A+K L
Sbjct: 249 TSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-- 306
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+ FL E + + H ++ L + +Y++ ++ S+GS+ +
Sbjct: 307 -EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 365
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHS 226
+A A G+ Y+ + +HRD++++NIL+ + +++DFGLA+ + +++T
Sbjct: 366 VDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 227 IA--PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
A PI+ T APE ++G K+DV++FG+ L E+ + GR P G
Sbjct: 423 GAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 467
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 73
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 74 IGVITENPVWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 129
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++++ ++ DFGL++++ T++ + + +APE
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 250 KTDVFAFGVFLLEII-SGRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 189 ASDVWMFGVCMWEILMHGVKPFQG 212
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 78
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 79 IGVITENPVWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 134
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++++ ++ DFGL++++ T++ + + +APE
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 194 ASDVWMFGVCMWEILMHGVKPFQG 217
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 77 IGVITENPVWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++++ ++ DFGL++++ T++ + + +APE
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA--LSYCH---SKRVI 134
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL ++ E +I+DFG + PS + GT +L PE + DEK
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G P + H++ + +E D +GA D+
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEA-----HTYQETYRRISRVEFTFPDFVTEGARDLI---- 241
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ + + R T++EVLE
Sbjct: 242 -----SRLLKHNASQRLTLAEVLE 260
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 77 IGVITENPVWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++++ ++ DFGL++++ T++ + + +APE
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 104
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 105 IGVITENPVWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 160
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++++ ++ DFGL++++ T++ + + +APE
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 220 ASDVWMFGVCMWEILMHGVKPFQG 243
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 48 TTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRK 107
T+KP + + + I + E +G+G + EV+ G +A+K L
Sbjct: 166 TSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-- 223
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+ FL E + + H ++ L + +Y++ ++ S+GS+ +
Sbjct: 224 -EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHS 226
+A A G+ Y+ + +HRD++++NIL+ + +++DFGLA+ + +++T
Sbjct: 283 VDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 227 IA--PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
A PI+ T APE ++G K+DV++FG+ L E+ + GR P G
Sbjct: 340 GAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 53/294 (18%)
Query: 66 NAFSSENLVGRGGYAEVYKG-VLQDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTI---G 119
N ++++G G + +V K + +DG + A+KR+ + + D ++F E+ + G
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-DHRDFAGELEVLCKLG 73
Query: 120 HVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASL------------FHDVNSPGVEWKV 166
H HPN+++LLG C G LYL +++ G++ F NS
Sbjct: 74 H--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 167 RHKI--AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH 224
+ + A ARG+ YL Q++ IHRD+ + NIL+ ++ +I+DFGL++ Q +
Sbjct: 132 QQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVY 185
Query: 225 HSIAPIEGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLH 278
++ T G L A E + + +DV+++GV L EI+S G P G
Sbjct: 186 -----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAE 239
Query: 279 SWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ K L QG +L P L +V L R C R P RP+ +++L
Sbjct: 240 LYEK--LPQG--YRLEKP-LNCDDEVYDLMR------QCWREKPYERPSFAQIL 282
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 77 IGVITENPVWIIMELCTLGELRS-FLQVRKFSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++A ++ DFGL++++ T++ + + +APE
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 138/302 (45%), Gaps = 69/302 (22%)
Query: 66 NAFSSENLVGRGGYAEVYKG-VLQDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTI---G 119
N ++++G G + +V K + +DG + A+KR+ + + D ++F E+ + G
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-DHRDFAGELEVLCKLG 83
Query: 120 HVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASL------------FHDVNSPGVEWKV 166
H HPN+++LLG C G LYL +++ G++ F NS
Sbjct: 84 H--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 167 RHKI--AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH 224
+ + A ARG+ YL Q++ IHRD+ + NIL+ ++ +I+DFGL++ Q +
Sbjct: 142 QQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVY 195
Query: 225 HSIAPIEGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGS----- 273
++ T G L A E + + +DV+++GV L EI+S G P G
Sbjct: 196 -----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 250
Query: 274 HQSL---HSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSE 330
++ L + KP+ E+ YD+ + C R P RP+ ++
Sbjct: 251 YEKLPQGYRLEKPLNCDDEV-----------YDLMR---------QCWREKPYERPSFAQ 290
Query: 331 VL 332
+L
Sbjct: 291 IL 292
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 81
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 82 IGVITENPVWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 137
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++++ ++ DFGL++++ T++ + + +APE
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 197 ASDVWMFGVCMWEILMHGVKPFQG 220
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G +A+V + G E+A+K + K + ++ E+ + + HPN++ L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC-QRRII 190
+ LYLI +++S G V F + + G +++ K A R + + C Q+RI+
Sbjct: 80 IETEKTLYLIMEYASGGEV---FDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQKRIV 133
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVD-E 249
HRD+K+ N+LL AD +I+DFG + + G+ + APE F D
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYAAPELFQGKKYDGP 190
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSH 274
+ DV++ GV L ++SG P DG +
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 19/222 (8%)
Query: 58 FEEISIATNAFSSENLVGR-GGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKE---FLT 113
+E ++ N ++G G + +VYK +E +V KV+ D + E+E ++
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKA---QNKETSVLAAAKVI-DTKSEEELEDYMV 56
Query: 114 EIGTIGHVCHPNVLSLLGC-CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV 172
EI + HPN++ LL +N L+++ +F + G+V ++ ++ P E +++ +
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ-VVCK 115
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
T L+YLH +IIHRD+K+ NIL T D + +++DFG++ + I G
Sbjct: 116 QTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-G 171
Query: 233 TFGHLAPEYFMHGI-----VDEKTDVFAFGVFLLEIISGRKP 269
T +APE M D K DV++ G+ L+E+ P
Sbjct: 172 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 42/240 (17%)
Query: 42 VACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKV 101
VA + E + W + +E+ + +G+G + +V G + G ++AVK
Sbjct: 5 VAAQDEFYRSGW-ALNMKELKLLQT-------IGKGEFGDVMLGDYR-GNKVAVK----C 51
Query: 102 VTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD--NGLYLIFQFSSRGSVASLFHDVNS 159
+ +D + FL E + + H N++ LLG V+ GLY++ ++ ++GS+
Sbjct: 52 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 111
Query: 160 PGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--- 216
+ K ++ + YL +HRD+ + N+L++ D ++SDFGL K
Sbjct: 112 SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168
Query: 217 ------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
LP +WT APE K+DV++FG+ L EI S GR P
Sbjct: 169 STQDTGKLPVKWT--------------APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 79
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 80 IGVITENPVWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLE---SKRF 135
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++++ ++ DFGL++++ T++ + + +APE
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 250 KTDVFAFGVFLLEII-SGRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 195 ASDVWMFGVCMWEILMHGVKPFQG 218
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + EV+ G ++A+K L + FL E + + H ++ L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP---ESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
+ +Y++ ++ ++GS+ D ++ +A A G+ Y+ + IHRD
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRD 130
Query: 194 IKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAPEYFMHGIVDEK 250
++S+NIL+ +I+DFGLA+ + ++ T A PI+ T APE ++G K
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT----APEAALYGRFTIK 186
Query: 251 TDVFAFGVFLLEIIS-GRKPVDGSH 274
+DV++FG+ L E+++ GR P G +
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMN 211
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 27/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRK-EKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + E + E+ H+ HPN+L L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 132 CCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ G+V ++ + + + A L Y H +R+I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA--LSYCH---SKRVI 134
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL ++ E +I+DFG + PS + GT +L PE + DEK
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIE-KLVDPRLQGAYDVTQLNR 309
D+++ GV E + G P + H++ + +E D +GA D+
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEA-----HTYQETYRRISRVEFTFPDFVTEGARDLI---- 241
Query: 310 LAFAASLCIRASPTWRPTMSEVLE 333
S ++ + + R T++EVLE
Sbjct: 242 -----SRLLKHNASQRLTLAEVLE 260
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 19/208 (9%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G +A+V + G E+A+K + K + ++ E+ + + HPN++ L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR----GLHYLHKGCQR 187
+ LYLI +++S G V F + + G +++ K A R + Y H Q+
Sbjct: 83 IETEKTLYLIMEYASGGEV---FDYLVAHG---RMKEKEARSKFRQIVSAVQYCH---QK 133
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
RI+HRD+K+ N+LL AD +I+DFG + + G + APE F
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC---GAPPYAAPELFQGKKY 190
Query: 248 D-EKTDVFAFGVFLLEIISGRKPVDGSH 274
D + DV++ GV L ++SG P DG +
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 34/208 (16%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G+G + +V G + G ++AVK + +D + FL E + + H N++ LLG
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVK----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 134 VD--NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
V+ GLY++ ++ ++GS+ + K ++ + YL +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 125
Query: 192 RDIKSSNILLTADFEPQISDFGLAK---------WLPSQWTHHSIAPIEGTFGHLAPEYF 242
RD+ + N+L++ D ++SDFGL K LP +WT APE
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT--------------APEAL 171
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
K+DV++FG+ L EI S GR P
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 456
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 457 IGVITENPVWIIMELCTLGELRS-FLQVRKFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++A ++ DFGL++++ T++ + + +APE
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 250 KTDVFAFGVFLLEII-SGRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 34/208 (16%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G+G + +V G + G ++AVK + +D + FL E + + H N++ LLG
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVK----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 134 VD--NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
V+ GLY++ ++ ++GS+ + K ++ + YL +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 312
Query: 192 RDIKSSNILLTADFEPQISDFGLAK---------WLPSQWTHHSIAPIEGTFGHLAPEYF 242
RD+ + N+L++ D ++SDFGL K LP +WT APE
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT--------------APEAL 358
Query: 243 MHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
K+DV++FG+ L EI S GR P
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 456
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 457 IGVITENPVWIIMELCTLGELRS-FLQVRKFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++++ ++ DFGL++++ T++ + + +APE
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 250 KTDVFAFGVFLLEII-SGRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G +A+V + G+E+AVK + K + ++ E+ + + HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC-QRRII 190
+ LYL+ +++S G V F + + G +++ K A R + + C Q+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEV---FDYLVAHG---RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH-HSIAPIEGTFGHLAPEYFMHGIVD- 248
HRD+K+ N+LL AD +I+DFG + +++T + + G+ + APE F D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 249 EKTDVFAFGVFLLEIISGRKPVDGSH 274
+ DV++ GV L ++SG P DG +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G +A+V + G+E+AVK + K + ++ E+ + + HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC-QRRII 190
+ LYL+ +++S G V F + + G +++ K A R + + C Q+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEV---FDYLVAHG---RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH-HSIAPIEGTFGHLAPEYFMHGIVD- 248
HRD+K+ N+LL AD +I+DFG + +++T + + G+ + APE F D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 249 EKTDVFAFGVFLLEIISGRKPVDGSH 274
+ DV++ GV L ++SG P DG +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 48 TTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRK 107
T+KP + + + I + E +G+G + EV+ G +A+K L +
Sbjct: 167 TSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP---GNMS 223
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+ FL E + + H ++ L + +Y++ ++ S+GS+ +
Sbjct: 224 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 283
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHS 226
+A A G+ Y+ + +HRD++++NIL+ + +++DFGL + + +++T
Sbjct: 284 VDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ 340
Query: 227 IA--PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
A PI+ T APE ++G K+DV++FG+ L E+ + GR P G
Sbjct: 341 GAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 31/278 (11%)
Query: 74 VGRGGYAE-VYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G + + + +DG + +K + ++ +E E+ + ++ HPN++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 133 CVDNG-LYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIA--VGTARGLHYLHKGCQRR 188
+NG LY++ + G LF +N+ GV ++ + V L ++H R+
Sbjct: 92 FEENGSLYIVMDYCEGGD---LFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRK 145
Query: 189 IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVD 248
I+HRDIKS NI LT D Q+ DFG+A+ L S T GT +L+PE + +
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS--TVELARACIGTPYYLSPEICENKPYN 203
Query: 249 EKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLN 308
K+D++A G L E+ + K G ++ LV + G++ L+
Sbjct: 204 NKSDIWALGCVLYELCT---------------LKHAFEAGSMKNLVLKIISGSFPPVSLH 248
Query: 309 R---LAFAASLCIRASPTWRPTMSEVLEVMLEGDQIDK 343
L S + +P RP+++ +LE +I+K
Sbjct: 249 YSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEK 286
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ +L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKFL---A 209
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW--THHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + + H+ + +A E
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 72 NLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVV---TDDRKEKEFLTEIGTIGHVCHPNVL 127
++G G + VYKG+ + DGE + + KV+ T + KE L E + V P V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 128 SLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
LLG C+ + + L+ Q G + + N + + + A+G+ YL
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVRE-NRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
R++HRD+ + N+L+ + +I+DFGLA+ L T + + +A E +
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 248 DEKTDVFAFGVFLLEIIS-GRKPVDG 272
++DV+++GV + E+++ G KP DG
Sbjct: 199 THQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 107/206 (51%), Gaps = 15/206 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G +A+V + G+E+AVK + K + ++ E+ + + HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC-QRRII 190
+ LYL+ +++S G V F + + G +++ K A R + + C Q+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEV---FDYLVAHG---RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH-HSIAPIEGTFGHLAPEYFMHGIVD- 248
HRD+K+ N+LL AD +I+DFG + +++T + + G + APE F D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 249 EKTDVFAFGVFLLEIISGRKPVDGSH 274
+ DV++ GV L ++SG P DG +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKFL---A 150
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW--THHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + + H+ + +A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKFL---A 151
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAK-WLPSQW-THHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ L ++ + H+ + +A E
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 26/266 (9%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G EV+ G ++AVK L + FL E + + H ++ L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQ---GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 134 VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
+Y+I ++ GS+ + + +A A G+ ++ +R IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 134
Query: 194 IKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAPEYFMHGIVDEK 250
++++NIL++ +I+DFGLA+ + ++ T A PI+ T APE +G K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT----APEAINYGTFTIK 190
Query: 251 TDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNR 309
+DV++FG+ L EI++ GR P G + I N ++V P ++ QL R
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQNLERGYRMVRPD-NCPEELYQLMR 244
Query: 310 LAFAASLCIRASPTWRPTMSEVLEVM 335
LC + P RPT + V+
Sbjct: 245 ------LCWKERPEDRPTFDYLRSVL 264
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 68
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ ++GS+ + ++ A G+ Y+
Sbjct: 69 HEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + ++WT A PI+ T AP
Sbjct: 129 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT----AP 181
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 182 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKFL---A 151
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW--THHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + + H+ + +A E
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 138/302 (45%), Gaps = 69/302 (22%)
Query: 66 NAFSSENLVGRGGYAEVYKG-VLQDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTI---G 119
N ++++G G + +V K + +DG + A+KR+ + + D ++F E+ + G
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-DHRDFAGELEVLCKLG 80
Query: 120 HVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASL------------FHDVNSPGVEWKV 166
H HPN+++LLG C G LYL +++ G++ F NS
Sbjct: 81 H--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 167 RHKI--AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH 224
+ + A ARG+ YL Q++ IHR++ + NIL+ ++ +I+DFGL++ Q +
Sbjct: 139 QQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVY 192
Query: 225 HSIAPIEGTFGHL-----APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGS----- 273
++ T G L A E + + +DV+++GV L EI+S G P G
Sbjct: 193 -----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 247
Query: 274 HQSL---HSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSE 330
++ L + KP+ E+ YD+ + C R P RP+ ++
Sbjct: 248 YEKLPQGYRLEKPLNCDDEV-----------YDLMR---------QCWREKPYERPSFAQ 287
Query: 331 VL 332
+L
Sbjct: 288 IL 289
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + + E + EI H+ HPN+L +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 132 CCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGT-ARGLHYLHKGCQRRI 189
D +YL+ +F+ RG L+ ++ G + R + A LHY H +R++
Sbjct: 83 YFHDRKRIYLMLEFAPRGE---LYKELQKHGRFDEQRSATFMEELADALHYCH---ERKV 136
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRDIK N+L+ E +I+DFG + PS GT +L PE DE
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDE 192
Query: 250 KTDVFAFGVFLLEIISGRKPVDG-SHQSLH 278
K D++ GV E + G P D SH H
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFDSPSHTETH 222
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + + E + EI H+ HPN+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 132 CCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGT-ARGLHYLHKGCQRRI 189
D +YL+ +F+ RG L+ ++ G + R + A LHY H +R++
Sbjct: 82 YFHDRKRIYLMLEFAPRGE---LYKELQKHGRFDEQRSATFMEELADALHYCH---ERKV 135
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRDIK N+L+ E +I+DFG + PS GT +L PE DE
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDE 191
Query: 250 KTDVFAFGVFLLEIISGRKPVDG-SHQSLH 278
K D++ GV E + G P D SH H
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETH 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + + I A+K L K + + E + EI H+ HPN+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 132 CCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGT-ARGLHYLHKGCQRRI 189
D +YL+ +F+ RG L+ ++ G + R + A LHY H +R++
Sbjct: 82 YFHDRKRIYLMLEFAPRGE---LYKELQKHGRFDEQRSATFMEELADALHYCH---ERKV 135
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRDIK N+L+ E +I+DFG + PS GT +L PE DE
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDE 191
Query: 250 KTDVFAFGVFLLEIISGRKPVDG-SHQSLH 278
K D++ GV E + G P D SH H
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETH 221
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 92 EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLSLLGCCVDNGLYLI--------- 141
++AVK L D KE ++E+ + H+ H N+++LLG C G L+
Sbjct: 78 KVAVKMLKSTAHADEKEA-LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 142 -FQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNIL 200
F R + A L + P +E + + A+G+ +L + IHRD+ + N+L
Sbjct: 137 LLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 192
Query: 201 LTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFL 260
LT +I DFGLA+ + + + +APE + ++DV+++G+ L
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 261 LEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIR 319
EI S G P G IL + KLV Q A + C
Sbjct: 253 WEIFSLGLNPYPG-----------ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWA 301
Query: 320 ASPTWRPTMSEVLEVMLEGDQIDK 343
PT RPT ++ + E Q D+
Sbjct: 302 LEPTHRPTFQQICSFLQEQAQEDR 325
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ +L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKFL---A 155
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW--THHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + + H+ + +A E
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G +A+V + G+E+AVK + K + ++ E+ + + HPN++ L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC-QRRII 190
+ LYL+ +++S G V F + + G W ++ K A R + + C Q+ I+
Sbjct: 75 IETEKTLYLVMEYASGGEV---FDYLVAHG--W-MKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH-HSIAPIEGTFGHLAPEYFMHGIVD- 248
HRD+K+ N+LL AD +I+DFG + +++T + + G+ + APE F D
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 249 EKTDVFAFGVFLLEIISGRKPVDGSH 274
+ DV++ GV L ++SG P DG +
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ +L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKFL---A 148
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW--THHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + + H+ + +A E
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 120/267 (44%), Gaps = 24/267 (8%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V+ G + +++A+K + + E++F+ E + + HP ++ L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
++ + L+F+F G ++ + + + G+ YL + C +IHR
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
D+ + N L+ + ++SDFG+ ++ L Q+T + + +PE F K+
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA--SPEVFSFSRYSSKS 188
Query: 252 DVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
DV++FGV + E+ S G+ P + S + + + +L PRL + +N
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNH- 242
Query: 311 AFAASLCIRASPTWRPTMSEVLEVMLE 337
C R P RP S +L + E
Sbjct: 243 ------CWRERPEDRPAFSRLLRQLAE 263
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 LVGRGGYAEVYKGVL--QDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
++GRG + VY G L DG++I AVK L ++ TD + +FLTE + HPNVLS
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 129 LLGCCV--DNGLYLIFQFSSRGSVASLF-HDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
LLG C+ + ++ + G + + ++ ++P V+ + + V A+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKFL---A 150
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW--THHSIAPIEGTFGHLAPEYFM 243
++ +HRD+ + N +L F +++DFGLA+ + + + H+ + +A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKP 269
K+DV++FGV L E+++ P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 92 EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLSLLGCCVDNGLYLI--------- 141
++AVK L D KE ++E+ + H+ H N+++LLG C G L+
Sbjct: 70 KVAVKMLKSTAHADEKEA-LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 142 -FQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNIL 200
F R + A L + P +E + + A+G+ +L + IHRD+ + N+L
Sbjct: 129 LLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 184
Query: 201 LTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFL 260
LT +I DFGLA+ + + + +APE + ++DV+++G+ L
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
Query: 261 LEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIR 319
EI S G P G IL + KLV Q A + C
Sbjct: 245 WEIFSLGLNPYPG-----------ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWA 293
Query: 320 ASPTWRPTMSEVLEVMLEGDQIDK 343
PT RPT ++ + E Q D+
Sbjct: 294 LEPTHRPTFQQICSFLQEQAQEDR 317
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G +A+V + G+E+AV+ + K + ++ E+ + + HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC-QRRII 190
+ LYL+ +++S G V F + + G +++ K A R + + C Q+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEV---FDYLVAHG---RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH-HSIAPIEGTFGHLAPEYFMHGIVD- 248
HRD+K+ N+LL AD +I+DFG + +++T + + G+ + APE F D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 249 EKTDVFAFGVFLLEIISGRKPVDGSH 274
+ DV++ GV L ++SG P DG +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G +A+V + G+E+AV+ + K + ++ E+ + + HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC-QRRII 190
+ LYL+ +++S G V F + + G +++ K A R + + C Q+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEV---FDYLVAHG---RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH-HSIAPIEGTFGHLAPEYFMHGIVD- 248
HRD+K+ N+LL AD +I+DFG + +++T + + G+ + APE F D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 249 EKTDVFAFGVFLLEIISGRKPVDGSH 274
+ DV++ GV L ++SG P DG +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 23/268 (8%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
F+ +G+G + EV+KG+ +++ ++ + + + ++ EI + V
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 128 SLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ 186
G + L++I ++ GS L P E+++ + +GL YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLR--AGPFDEFQIATMLK-EILKGLDYLH---S 138
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPEYFMHG 245
+ IHRDIK++N+LL+ + +++DFG+A L +Q ++ GT +APE
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV---GTPFWMAPEVIQQS 195
Query: 246 IVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVT 305
D K D+++ G+ +E+ G P H P+ I K P L G D T
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDMH--------PMRVLFLIPKNNPPTLVG--DFT 245
Query: 306 QLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ + A C+ P++RPT E+L+
Sbjct: 246 KSFKEFIDA--CLNKDPSFRPTAKELLK 271
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y VYK + ++ +I + V +D +E + EI + P+V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD---LQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 134 VDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
N L+++ ++ GSV+ + N E ++ I T +GL YLH R IHR
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI-ATILQSTLKGLEYLHF---MRKIHR 149
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTD 252
DIK+ NILL + +++DFG+A L + + GT +APE + D
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWMAPEVIQEIGYNCVAD 207
Query: 253 VFAFGVFLLEIISGRKPVDGSH 274
+++ G+ +E+ G+ P H
Sbjct: 208 IWSLGITAIEMAEGKPPYADIH 229
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 37/270 (13%)
Query: 73 LVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFL-TEIGTIGHVCHPNVLSLL 130
+G+GG+A+ Y+ D +E+ A K + K + +KE + TEI + +P+V+
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHD---VNSPGVEWKVRHKIAVGTARGLHYLHKGCQ 186
G D+ +Y++ + R S+ L V P + +R T +G+ YLH
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ-----TIQGVQYLHNN-- 145
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
R+IHRD+K N+ L D + +I DFGLA + ++ + GT ++APE
Sbjct: 146 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
+ D+++ G L ++ G+ P + S ++ + N+ + + ++P
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFETSCLK-ETYIRIKKNEYSVPRHINP---------- 251
Query: 307 LNRLAFAASLCIR----ASPTWRPTMSEVL 332
AS IR A PT RP+++E+L
Sbjct: 252 ------VASALIRRMLHADPTLRPSVAELL 275
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 37/270 (13%)
Query: 73 LVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFL-TEIGTIGHVCHPNVLSLL 130
+G+GG+A+ Y+ D +E+ A K + K + +KE + TEI + +P+V+
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHD---VNSPGVEWKVRHKIAVGTARGLHYLHKGCQ 186
G D+ +Y++ + R S+ L V P + +R T +G+ YLH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ-----TIQGVQYLHNN-- 161
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
R+IHRD+K N+ L D + +I DFGLA + ++ + GT ++APE
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
+ D+++ G L ++ G+ P + S ++ + N+ + + ++P
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLK-ETYIRIKKNEYSVPRHINP---------- 267
Query: 307 LNRLAFAASLCIR----ASPTWRPTMSEVL 332
AS IR A PT RP+++E+L
Sbjct: 268 ------VASALIRRMLHADPTLRPSVAELL 291
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 8 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 64
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+GS+ + +A A G+ Y+
Sbjct: 65 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 125 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 177
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 178 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 37/270 (13%)
Query: 73 LVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFL-TEIGTIGHVCHPNVLSLL 130
+G+GG+A+ Y+ D +E+ A K + K + +KE + TEI + +P+V+
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHD---VNSPGVEWKVRHKIAVGTARGLHYLHKGCQ 186
G D+ +Y++ + R S+ L V P + +R T +G+ YLH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ-----TIQGVQYLHNN-- 161
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
R+IHRD+K N+ L D + +I DFGLA + ++ + GT ++APE
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
+ D+++ G L ++ G+ P + S ++ + N+ + + ++P
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLK-ETYIRIKKNEYSVPRHINP---------- 267
Query: 307 LNRLAFAASLCIR----ASPTWRPTMSEVL 332
AS IR A PT RP+++E+L
Sbjct: 268 ------VASALIRRMLHADPTLRPSVAELL 291
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 37/270 (13%)
Query: 73 LVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFL-TEIGTIGHVCHPNVLSLL 130
+G+GG+A+ Y+ D +E+ A K + K + +KE + TEI + +P+V+
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHD---VNSPGVEWKVRHKIAVGTARGLHYLHKGCQ 186
G D+ +Y++ + R S+ L V P + +R T +G+ YLH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ-----TIQGVQYLHNN-- 161
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
R+IHRD+K N+ L D + +I DFGLA + ++ + GT ++APE
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
+ D+++ G L ++ G+ P + S ++ + N+ + + ++P
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLK-ETYIRIKKNEYSVPRHINP---------- 267
Query: 307 LNRLAFAASLCIR----ASPTWRPTMSEVL 332
AS IR A PT RP+++E+L
Sbjct: 268 ------VASALIRRMLHADPTLRPSVAELL 291
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEE----IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G + +V++G+ E +A+K +D +EK FL E T+ HP+++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+G +N +++I + + G + S F V ++ A + L YL +R
Sbjct: 77 IGVITENPVWIIMELCTLGELRS-FLQVRKFSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+HRDI + N+L++++ ++ DFGL++++ T + + +APE
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDG 272
+DV+ FGV + EI+ G KP G
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+GS+ + +A A G+ Y+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 184
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKIR 71
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+GS+ + +A A G+ Y+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 184
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 68 FSSENLVGRGGYAEVY--KGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+ + +G+G +A+V + VL G E+AVK + K + ++ E+ + + HPN
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 126 VLSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
++ L + LYL+ +++S G V F + + G +++ K A R + +
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEV---FDYLVAHG---RMKEKEARAKFRQIVSAVQY 129
Query: 185 C-QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
C Q+ I+HRD+K+ N+LL D +I+DFG + + + G+ + APE F
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT---VGNKLDTFCGSPPYAAPELFQ 186
Query: 244 HGIVD-EKTDVFAFGVFLLEIISGRKPVDGSH 274
D + DV++ GV L ++SG P DG +
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 26/265 (9%)
Query: 92 EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLSLLGCCVDNG-LYLIFQFSSRGS 149
++AVK L D KE ++E+ + H+ H N+++LLG C G + +I ++ G
Sbjct: 78 KVAVKMLKSTAHADEKEA-LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 150 VASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ----------RRIIHRDIKSSNI 199
+ + F S +E IA TA LH Q + IHRD+ + N+
Sbjct: 137 LLN-FLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 200 LLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVF 259
LLT +I DFGLA+ + + + +APE + ++DV+++G+
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 260 LLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCI 318
L EI S G P G IL + KLV Q A + C
Sbjct: 256 LWEIFSLGLNPYPG-----------ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACW 304
Query: 319 RASPTWRPTMSEVLEVMLEGDQIDK 343
PT RPT ++ + E Q D+
Sbjct: 305 ALEPTHRPTFQQICSFLQEQAQEDR 329
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 33/264 (12%)
Query: 73 LVGRGGYAEVYK---GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
++G+G + EV K + Q +E AVK + K ++ L E+ + + HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQ--QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 130 LGCCVDNG-LYLIFQFSSRGSVASLFHDV-NSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
D+ Y++ + + G LF ++ +I G+ Y+HK
Sbjct: 87 FEILEDSSSFYIVGELYTGGE---LFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---H 140
Query: 188 RIIHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
I+HRD+K NILL + D + +I DFGL+ + + GT ++APE +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPE-VLR 196
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDV 304
G DEK DV++ GV L ++SG P G ++ IL + E K A+D+
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKY-------AFDL 243
Query: 305 TQLNRLAFAASLCIRASPTWRPTM 328
Q ++ A IR T+ P++
Sbjct: 244 PQWRTISDDAKDLIRKMLTFHPSL 267
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 4 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 60
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+GS+ + +A A G+ Y+
Sbjct: 61 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 121 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 173
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 174 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 6 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 62
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+GS+ + +A A G+ Y+
Sbjct: 63 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 123 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 175
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 209
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 24/267 (8%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V+ G + +++A+K + + E++F+ E + + HP ++ L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
++ + L+F+F G ++ + + + G+ YL + C +IHR
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
D+ + N L+ + ++SDFG+ ++ L Q+T + + +PE F K+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA--SPEVFSFSRYSSKS 185
Query: 252 DVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
DV++FGV + E+ S G+ P + S + + + +L PRL + +N
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNH- 239
Query: 311 AFAASLCIRASPTWRPTMSEVLEVMLE 337
C + P RP S +L + E
Sbjct: 240 ------CWKERPEDRPAFSRLLRQLAE 260
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 74 VGRGGYAEVYKG--VLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC---HPNVLS 128
+G G Y +V+K + G +A+KR+ ++ + E+ + H+ HPNV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 129 LLGCCV------DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
L C + L L+F+ + + + V PGV + + RGL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K NIL+T+ + +++DFGLA+ Q S+ T + APE
Sbjct: 138 S---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAPEVL 191
Query: 243 MHGIVDEKTDVFAFGVFLLEIISGRKPV 270
+ D+++ G E+ RKP+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 24/267 (8%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V+ G + +++A+K + + E++F+ E + + HP ++ L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
++ + L+F+F G ++ + + + G+ YL + C +IHR
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
D+ + N L+ + ++SDFG+ ++ L Q+T + + +PE F K+
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA--SPEVFSFSRYSSKS 183
Query: 252 DVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
DV++FGV + E+ S G+ P + S + + + +L PRL + +N
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNH- 237
Query: 311 AFAASLCIRASPTWRPTMSEVLEVMLE 337
C + P RP S +L + E
Sbjct: 238 ------CWKERPEDRPAFSRLLRQLAE 258
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 108/203 (53%), Gaps = 15/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + +VYK ++ +A ++ + +++ E +++ EI + HP ++ LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGAY 85
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+G L+++ +F G+V ++ +++ E +++ + L++LH +RIIHR
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-VVCRQMLEALNFLH---SKRIIHR 141
Query: 193 DIKSSNILLTADFEPQISDFGL-AKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV---- 247
D+K+ N+L+T + + +++DFG+ AK L + S GT +APE M +
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMCETMKDTP 198
Query: 248 -DEKTDVFAFGVFLLEIISGRKP 269
D K D+++ G+ L+E+ P
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPP 221
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+GS+ + +A A G+ Y+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 184
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 108/203 (53%), Gaps = 15/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + +VYK ++ +A ++ + +++ E +++ EI + HP ++ LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGAY 77
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+G L+++ +F G+V ++ +++ E +++ + L++LH +RIIHR
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-VVCRQMLEALNFLH---SKRIIHR 133
Query: 193 DIKSSNILLTADFEPQISDFGL-AKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV---- 247
D+K+ N+L+T + + +++DFG+ AK L + S GT +APE M +
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMCETMKDTP 190
Query: 248 -DEKTDVFAFGVFLLEIISGRKP 269
D K D+++ G+ L+E+ P
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPP 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+GS+ + +A A G+ Y+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 184
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
VG G Y VYK G +A+KR+ D+ + EI + + HPN++SL+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 134 -VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+ L L+F+F + L D N G++ RG+ + H Q RI+HR
Sbjct: 89 HSERCLTLVFEFMEKDLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHR 143
Query: 193 DIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYFM-HGIVDE 249
D+K N+L+ +D +++DFGLA+ +P + H + T + AP+ M
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKKYST 199
Query: 250 KTDVFAFGVFLLEIISGR 267
D+++ G E+I+G+
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 25/214 (11%)
Query: 70 SENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
S+ ++G+G + VY G Q+ + A+K L+++ T+ ++ + FL E + + HPN
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPN 83
Query: 126 VLSLLGCCVD-NGL-YLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG--TARGLHYL 181
VL+L+G + GL +++ + G L + SP V+ I+ G ARG+ YL
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGD---LLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK------WLPSQWTHHSIAPIEGTFG 235
+++ +HRD+ + N +L F +++DFGLA+ + Q H+ P++ T
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT-- 195
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
A E K+DV++FGV L E+++ P
Sbjct: 196 --ALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
VG G Y VYK G +A+KR+ D+ + EI + + HPN++SL+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 134 -VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+ L L+F+F + L D N G++ RG+ + H Q RI+HR
Sbjct: 89 HSERCLTLVFEFMEKDLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHR 143
Query: 193 DIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYFM-HGIVDE 249
D+K N+L+ +D +++DFGLA+ +P + H + T + AP+ M
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKKYST 199
Query: 250 KTDVFAFGVFLLEIISGR 267
D+++ G E+I+G+
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 74 VGRGGYAEVYKG--VLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC---HPNVLS 128
+G G Y +V+K + G +A+KR+ ++ + E+ + H+ HPNV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 129 LLGCCV------DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
L C + L L+F+ + + + V PGV + + RGL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K NIL+T+ + +++DFGLA+ Q S+ T + APE
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAPEVL 191
Query: 243 MHGIVDEKTDVFAFGVFLLEIISGRKPV 270
+ D+++ G E+ RKP+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 74 VGRGGYAEVYKG--VLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC---HPNVLS 128
+G G Y +V+K + G +A+KR+ ++ + E+ + H+ HPNV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 129 LLGCCV------DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
L C + L L+F+ + + + V PGV + + RGL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K NIL+T+ + +++DFGLA+ Q S+ T + APE
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAPEVL 191
Query: 243 MHGIVDEKTDVFAFGVFLLEIISGRKPV 270
+ D+++ G E+ RKP+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 27/234 (11%)
Query: 56 FSFEEISIATNAFSSE---------NLVGRGGYAEVYKGVLQ-DGEE---IAVKRLTKVV 102
F+FE+ + A F+ E ++G G + EV G L+ G+ +A+K L
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 103 TDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPG 161
T+ ++ ++FL+E +G HPNV+ L G + + +I +F GS+ S +
Sbjct: 74 TE-KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-- 130
Query: 162 VEWKVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL- 218
++ V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL+++L
Sbjct: 131 -QFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
Query: 219 --PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
S T+ S + APE + +DV+++G+ + E++S G +P
Sbjct: 187 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ ++ GS+ S HD ++
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QF 144
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGLA+ L
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDP 201
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 202 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 24/267 (8%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V+ G + +++A+K + + E +F+ E + + HP ++ L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE---GSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
++ + L+F+F G ++ + + + G+ YL + C +IHR
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
D+ + N L+ + ++SDFG+ ++ L Q+T + + +PE F K+
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA--SPEVFSFSRYSSKS 205
Query: 252 DVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
DV++FGV + E+ S G+ P + S + + + +L PRL + +N
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNH- 259
Query: 311 AFAASLCIRASPTWRPTMSEVLEVMLE 337
C + P RP S +L + E
Sbjct: 260 ------CWKERPEDRPAFSRLLRQLAE 280
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V G + ++AVK + + E EF E T+ + HP ++ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE---GSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 134 V-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+ +Y++ ++ S G + + + G+E ++ G+ +L + IHR
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHR 128
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA---PIEGTFGHLAPEYFMHGIVDE 249
D+ + N L+ D ++SDFG+ +++ S+ P++ + APE F +
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS----APEVFHYFKYSS 184
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLN 308
K+DV+AFG+ + E+ S G+ P D L++ ++ +L + +L P L +
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYD-----LYTNSEVVLKVSQGHRLYRPHLAS----DTIY 235
Query: 309 RLAFAASLCIRASPTWRPTMSEVL 332
++ ++ C P RPT ++L
Sbjct: 236 QIMYS---CWHELPEKRPTFQQLL 256
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 33/264 (12%)
Query: 73 LVGRGGYAEVYK---GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
++G+G + EV K + Q +E AVK + K ++ L E+ + + HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQ--QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 130 LGCCVDNG-LYLIFQFSSRGSVASLFHDV-NSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
D+ Y++ + + G LF ++ +I G+ Y+HK
Sbjct: 87 FEILEDSSSFYIVGELYTGGE---LFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---H 140
Query: 188 RIIHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
I+HRD+K NILL + D + +I DFGL+ + + GT ++APE +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPE-VLR 196
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDV 304
G DEK DV++ GV L ++SG P G ++ IL + E K A+D+
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKY-------AFDL 243
Query: 305 TQLNRLAFAASLCIRASPTWRPTM 328
Q ++ A IR T+ P++
Sbjct: 244 PQWRTISDDAKDLIRKMLTFHPSL 267
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+G + + +A A G+ Y+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 184
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 29/262 (11%)
Query: 73 LVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
++G+G + EV K + +E AVK + K ++ L E+ + + HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 132 CCVDNG-LYLIFQFSSRGSVASLFHDV-NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
D+ Y++ + + G LF ++ +I G+ Y+HK I
Sbjct: 89 ILEDSSSFYIVGELYTGGE---LFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 190 IHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+HRD+K NILL + D + +I DFGL+ + + GT ++APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPE-VLRGT 198
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
DEK DV++ GV L ++SG P G ++ IL + E K A+D+ Q
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKY-------AFDLPQ 245
Query: 307 LNRLAFAASLCIRASPTWRPTM 328
++ A IR T+ P++
Sbjct: 246 WRTISDDAKDLIRKMLTFHPSL 267
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+GS+ + +A A G+ Y+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + ++ T A PI+ T AP
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT----AP 184
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 25/221 (11%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGE-----EIAVKRLTKVVTDDRKEKEFLTEIGT 117
I + + + ++G G + EVYKG+L+ +A+K L T+ ++ +FL E G
Sbjct: 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQRVDFLGEAGI 99
Query: 118 IGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GT 174
+G H N++ L G + +I ++ G++ + + E+ V + + G
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGI 156
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-----PSQWTHHSIAP 229
A G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L + T P
Sbjct: 157 AAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 230 IEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
I T APE + +DV++FG+ + E+++ G +P
Sbjct: 214 IRWT----APEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+GS+ + +A A G+ Y+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD+ ++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 132 R---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 184
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ ++ GS+ S HD ++
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QF 144
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 202 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G +A+V + G+E+AVK + K + ++ E+ + HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
+ LYL+ +++S G V + + E + R K + Y H Q+ I+H
Sbjct: 82 IETEKTLYLVXEYASGGEVFD-YLVAHGRXKEKEARAKFR-QIVSAVQYCH---QKFIVH 136
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWTH-HSIAPIEGTFGHLAPEYFMHGIVD-E 249
RD+K+ N+LL AD +I+DFG + +++T + + G + APE F D
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFS----NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSH 274
+ DV++ GV L ++SG P DG +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 92 EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLSLLGCCVDNG-LYLIFQFSSRGS 149
++AVK L D KE ++E+ + H+ H N+++LLG C G + +I ++ G
Sbjct: 78 KVAVKMLKSTAHADEKEA-LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 150 VASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ----------RRIIHRDIKSSNI 199
+ + F S +E IA T LH Q + IHRD+ + N+
Sbjct: 137 LLN-FLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 200 LLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVF 259
LLT +I DFGLA+ + + + +APE + ++DV+++G+
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 260 LLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCI 318
L EI S G P G IL + KLV Q A + C
Sbjct: 256 LWEIFSLGLNPYPG-----------ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACW 304
Query: 319 RASPTWRPTMSEVLEVMLEGDQIDK 343
PT RPT ++ + E Q D+
Sbjct: 305 ALEPTHRPTFQQICSFLQEQAQEDR 329
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 68
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ ++GS+ + ++ A G+ Y+
Sbjct: 69 HEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 129 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 181
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 182 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ ++ GS+ S HD ++
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QF 144
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 202 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 29 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ ++ GS+ S HD ++
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QF 142
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L
Sbjct: 143 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 199
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 200 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ ++ GS+ S HD ++
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QF 144
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 202 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ ++ GS+ S HD ++
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QF 144
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 202 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ ++ GS+ S HD ++
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QF 144
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 202 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + +Y++ ++ S+G + + +A A G+ Y+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + +++T A PI+ T AP
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----AP 184
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 27/223 (12%)
Query: 71 ENLVGRGGYAEVYKGVLQ-DGEE---IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
E ++G G + EV +G L+ G++ +A+K L T+ R+ +EFL+E +G HPN+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTE-RQRREFLSEASIMGQFEHPNI 77
Query: 127 LSLLGCCVDNGLYLIF-QFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GTARGLHYLHK 183
+ L G ++ +I +F G++ S + ++ V + + G A G+ YL
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG---QFTVIQLVGMLRGIASGMRYL-- 132
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-------PIEGTFGH 236
+ +HRD+ + NIL+ ++ ++SDFGL+++L + + PI T
Sbjct: 133 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT--- 188
Query: 237 LAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPV-DGSHQSL 277
APE +D +++G+ + E++S G +P D S+Q +
Sbjct: 189 -APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 230
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 24/267 (8%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V+ G + +++A+K + + E++F+ E + + HP ++ L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
++ + L+ +F G ++ + + + G+ YL + C +IHR
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
D+ + N L+ + ++SDFG+ ++ L Q+T + + +PE F K+
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA--SPEVFSFSRYSSKS 186
Query: 252 DVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
DV++FGV + E+ S G+ P + S + + + +L PRL + +N
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNH- 240
Query: 311 AFAASLCIRASPTWRPTMSEVLEVMLE 337
C R P RP S +L + E
Sbjct: 241 ------CWRERPEDRPAFSRLLRQLAE 261
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ ++ GS+ S HD ++
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QF 144
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL + L
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 202 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 72 NLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLT---EIGTIGHVCHPNVL 127
++G G + V+KGV + +GE I + KV+ D + F + IG + H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 128 SLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPG-VEWKVRHKIAVGTARGLHYLHKGCQ 186
LLG C + L L+ Q+ GS+ L H G + ++ V A+G++YL +
Sbjct: 97 RLLGLCPGSSLQLVTQYLPLGSL--LDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---E 151
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
++HR++ + N+LL + + Q++DFG+A LP + + +A E G
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 247 VDEKTDVFAFGVFLLEIIS-GRKPVDG 272
++DV+++GV + E+++ G +P G
Sbjct: 212 YTHQSDVWSYGVTVWELMTFGAEPYAG 238
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 73 LVGRGGYAEVYKGVLQDGEEIAVKRLT--KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G+GG+A+ ++ D +E+ ++ ++ + ++ EI + H +V+
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
G DN ++++ + R S+ L H E + R+ + G YLH+ R+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 138
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRD+K N+ L D E +I DFGLA + ++ + GT ++APE
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNR 309
+ DV++ G + ++ G+ P + S ++ + N+ I K ++P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKNEYSIPKHINP------------- 242
Query: 310 LAFAASLC---IRASPTWRPTMSEVL 332
AASL ++ PT RPT++E+L
Sbjct: 243 --VAASLIQKMLQTDPTARPTINELL 266
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 29/266 (10%)
Query: 73 LVGRGGYAEVYKGVLQDGEEIAVKRLT--KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G+GG+A+ ++ D +E+ ++ ++ + ++ EI + H +V+
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
G DN ++++ + R S+ L H E + R+ + G YLH+ R+
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 136
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRD+K N+ L D E +I DFGLA + + + GT ++APE
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSF 194
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNR 309
+ DV++ G + ++ G+ P + S ++ + N+ I K ++P
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKNEYSIPKHINP------------- 240
Query: 310 LAFAASLC---IRASPTWRPTMSEVL 332
AASL ++ PT RPT++E+L
Sbjct: 241 --VAASLIQKMLQTDPTARPTINELL 264
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 73 LVGRGGYAEVYKGVLQDGEEIAVKRLT--KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G+GG+A+ ++ D +E+ ++ ++ + ++ EI + H +V+
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
G DN ++++ + R S+ L H E + R+ + G YLH+ R+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 138
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRD+K N+ L D E +I DFGLA + ++ + GT ++APE
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNR 309
+ DV++ G + ++ G+ P + S ++ + N+ I K ++P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKNEYSIPKHINP------------- 242
Query: 310 LAFAASLC---IRASPTWRPTMSEVL 332
AASL ++ PT RPT++E+L
Sbjct: 243 --VAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 73 LVGRGGYAEVYKGVLQDGEEIAVKRLT--KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G+GG+A+ ++ D +E+ ++ ++ + ++ EI + H +V+
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
G DN ++++ + R S+ L H E + R+ + G YLH+ R+
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 142
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRD+K N+ L D E +I DFGLA + ++ + GT ++APE
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNR 309
+ DV++ G + ++ G+ P + S ++ + N+ I K ++P
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKNEYSIPKHINP------------- 246
Query: 310 LAFAASLC---IRASPTWRPTMSEVL 332
AASL ++ PT RPT++E+L
Sbjct: 247 --VAASLIQKMLQTDPTARPTINELL 270
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 29/266 (10%)
Query: 73 LVGRGGYAEVYKGVLQDGEEIAVKRLT--KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G+GG+A+ ++ D +E+ ++ ++ + ++ EI + H +V+
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
G DN ++++ + R S+ L H E + R+ + G YLH+ R+
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 160
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRD+K N+ L D E +I DFGLA + + + GT ++APE
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSF 218
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNR 309
+ DV++ G + ++ G+ P + S ++ + N+ I K ++P
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKNEYSIPKHINP------------- 264
Query: 310 LAFAASLC---IRASPTWRPTMSEVL 332
AASL ++ PT RPT++E+L
Sbjct: 265 --VAASLIQKMLQTDPTARPTINELL 288
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 72 NLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLT---EIGTIGHVCHPNVL 127
++G G + V+KGV + +GE I + KV+ D + F + IG + H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 128 SLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPG-VEWKVRHKIAVGTARGLHYLHKGCQ 186
LLG C + L L+ Q+ GS+ L H G + ++ V A+G++YL +
Sbjct: 79 RLLGLCPGSSLQLVTQYLPLGSL--LDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---E 133
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
++HR++ + N+LL + + Q++DFG+A LP + + +A E G
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 247 VDEKTDVFAFGVFLLEIIS-GRKPVDG 272
++DV+++GV + E+++ G +P G
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAG 220
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 93
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK----------IAVGT 174
++LLG C G L +I +F G++++ + V +K +K +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKL 293
+APE + ++DV++FGV L EI S G P G + L +G +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRR--LKEGTRMRA 268
Query: 294 VDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
D Y T L+ C P+ RPT SE++E
Sbjct: 269 PDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 299
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 27/220 (12%)
Query: 64 ATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRKEKEFLTEIGTIGH 120
ATN S + +VG G + EV G L+ +EI+V + KV +++ ++FL E +G
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 121 VCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEWKVRHKIAV--GTA 175
HPN++ L G + + ++ ++ GS+ S HD ++ V + + G A
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIA 128
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-----PSQWTHHSIAPI 230
G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L + T PI
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
T +PE + +DV+++G+ L E++S G +P
Sbjct: 186 RWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 29/266 (10%)
Query: 73 LVGRGGYAEVYKGVLQDGEEIAVKRLTK--VVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G+GG+A+ ++ D +E+ ++ ++ + ++ EI + H +V+
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
G DN ++++ + R S+ L H E + R+ + G YLH+ R+
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 162
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRD+K N+ L D E +I DFGLA + + + GT ++APE
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSF 220
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNR 309
+ DV++ G + ++ G+ P + S ++ + N+ I K ++P
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKNEYSIPKHINP------------- 266
Query: 310 LAFAASLC---IRASPTWRPTMSEVL 332
AASL ++ PT RPT++E+L
Sbjct: 267 --VAASLIQKMLQTDPTARPTINELL 290
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 27/223 (12%)
Query: 71 ENLVGRGGYAEVYKGVLQ-DGEE---IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
E ++G G + EV +G L+ G++ +A+K L T+ R+ +EFL+E +G HPN+
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTE-RQRREFLSEASIMGQFEHPNI 79
Query: 127 LSLLGCCVDNGLYLIF-QFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GTARGLHYLHK 183
+ L G ++ +I +F G++ S + ++ V + + G A G+ YL
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG---QFTVIQLVGMLRGIASGMRYL-- 134
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT-------FGH 236
+ +HRD+ + NIL+ ++ ++SDFGL+++L +S P E +
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL----EENSSDPTETSSLGGKIPIRW 189
Query: 237 LAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPV-DGSHQSL 277
APE +D +++G+ + E++S G +P D S+Q +
Sbjct: 190 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 232
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 27/220 (12%)
Query: 64 ATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRKEKEFLTEIGTIGH 120
ATN S + +VG G + EV G L+ +EI+V + KV +++ ++FL E +G
Sbjct: 32 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 121 VCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEWKVRHKIAV--GTA 175
HPN++ L G + + ++ ++ GS+ S HD ++ V + + G A
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIA 145
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-----PSQWTHHSIAPI 230
G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L + T PI
Sbjct: 146 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
T +PE + +DV+++G+ L E++S G +P
Sbjct: 203 RWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 93
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK----------IAVGT 174
++LLG C G L +I +F G++++ + V +K +K +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKL 293
+APE + ++DV++FGV L EI S G P G + L +G +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGTRMRA 268
Query: 294 VDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
D Y T L+ C P+ RPT SE++E
Sbjct: 269 PDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 299
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + EV+ G + ++AVK L + FL E + + H ++ L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 134 V-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+ +Y+I ++ ++GS+ V + A G+ Y+ + + IHR
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHR 134
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAPEYFMHGIVDE 249
D++++N+L++ +I+DFGLA+ + +++T A PI+ T APE G
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGCFTI 190
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV++FG+ L EI++ G+ P G
Sbjct: 191 KSDVWSFGILLYEIVTYGKIPYPG 214
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 93
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKV------------RHKIAV 172
++LLG C G L +I +F G++++ + V +KV H I
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 173 G--TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGT 268
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 269 RMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 303
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ + GS+ S HD ++
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-----QF 144
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 202 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 130
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKV------------RHKIAV 172
++LLG C G L +I +F G++++ + V +KV H I
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 173 G--TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 191 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGT 305
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 306 RMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 340
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 27/233 (11%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRK 107
PT F + ATN S + +VG G + EV G L+ +EI+V + KV +++
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 108 EKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEW 164
++FL E +G HPN++ L G + + ++ + GS+ S HD ++
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-----QF 144
Query: 165 KVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---- 218
V + + G A G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L
Sbjct: 145 TVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 219 -PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ T PI T +PE + +DV+++G+ L E++S G +P
Sbjct: 202 EAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + EV+ G + ++AVK L + FL E + + H ++ L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK---PGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 134 V-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+ +Y+I +F ++GS+ V + A G+ Y+ + + IHR
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHR 133
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAPEYFMHGIVDE 249
D++++N+L++ +I+DFGLA+ + +++T A PI+ T APE G
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGCFTI 189
Query: 250 KTDVFAFGVFLLEIIS-GRKPVDG 272
K++V++FG+ L EI++ G+ P G
Sbjct: 190 KSNVWSFGILLYEIVTYGKIPYPG 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC-- 132
RG + V+K L + E +AVK D++ + E+ ++ + H N+L +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 133 ---CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK------ 183
VD L+LI F +GS++ + + V W IA ARGL YLH+
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDF---LKANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 184 -GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF 242
G + I HRDIKS N+LL + I+DFGLA + + GT ++APE
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 243 MHGIVDE-----KTDVFAFGVFLLEIISGRKPVDG 272
I + + D++A G+ L E+ S DG
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 84
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKV------------RHKIAV 172
++LLG C G L +I +F G++++ + V +KV H I
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 173 G--TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGT 259
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 260 RMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 294
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 84
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKV------------RHKIAV 172
++LLG C G L +I +F G++++ + V +KV H I
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 173 G--TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGT 259
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 260 RMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 294
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 39/284 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 93
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKV------------RHKIAV 172
++LLG C G L +I +F G++++ + V +KV H I
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 173 G--TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ +
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGT 268
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 269 RMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 303
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
I + E +G+G + EV+ G +A+K L + FL E + +
Sbjct: 5 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 61
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
H ++ L + + ++ ++ S+GS+ + +A A G+ Y+
Sbjct: 62 HEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIA--PIEGTFGHLAP 239
+ +HRD++++NIL+ + +++DFGLA+ + ++ T A PI+ T AP
Sbjct: 122 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT----AP 174
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
E ++G K+DV++FG+ L E+ + GR P G
Sbjct: 175 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 39/284 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 84
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKV------------RHKIAV 172
++LLG C G L +I +F G++++ + V +KV H I
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 173 G--TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ +
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGT 259
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 260 RMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 294
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 41/277 (14%)
Query: 92 EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLSLLGCCVDNGLYLI--------- 141
++AVK L D KE ++E+ + H+ H N+++LLG C G L+
Sbjct: 63 KVAVKMLKSTAHADEKEA-LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 142 -FQFSSRGSVASLFHDVNSPG-------------VEWKVRHKIAVGTARGLHYLHKGCQR 187
F R + A L + +PG +E + + A+G+ +L +
Sbjct: 122 LLNFLRRKAEAMLGPSL-APGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASK 177
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IHRD+ + N+LLT +I DFGLA+ + + + +APE +
Sbjct: 178 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 237
Query: 248 DEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
++DV+++G+ L EI S G P G IL + KLV Q A
Sbjct: 238 TVQSDVWSYGILLWEIFSLGLNPYPG-----------ILVNSKFYKLVKDGYQMAQPAFA 286
Query: 307 LNRLAFAASLCIRASPTWRPTMSEVLEVMLEGDQIDK 343
+ C PT RPT ++ + E Q D+
Sbjct: 287 PKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 323
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G VY + + G+E+A++++ + K++ + EI + +PN+++ L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 133 -CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
V + L+++ ++ + GS+ + V ++ + + L +LH ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDV---VTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 192 RDIKSSNILLTADFEPQISDFGL-AKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
RDIKS NILL D +++DFG A+ P Q ++ GT +APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGPK 196
Query: 251 TDVFAFGVFLLEIISGRKP 269
D+++ G+ +E+I G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 74 VGRGG--YAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
+G GG Y ++ +G L DG A+KR+ DR+E + ++ + + HPN+L L+
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFN--HPNILRLVA 93
Query: 132 CCV-----DNGLYLIFQFSSRGSVASLFHDVNSPG-------VEWKVRHKIAVGTARGLH 179
C+ + +L+ F RG++ + + G + W + +G RGL
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLE 148
Query: 180 YLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-------PSQWTHHSIAPIEG 232
+H + HRD+K +NILL + +P + D G T A
Sbjct: 149 AIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 233 TFGHLAPEYFM---HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGE 289
T + APE F H ++DE+TDV++ G L ++ G P D Q S A + NQ
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 290 IEK 292
I +
Sbjct: 266 IPQ 268
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 39/240 (16%)
Query: 68 FSSENL-----VGRGGYAEVYK----GVLQDGEEIAVK-RLTKVVTDDRKEKEFLTEIGT 117
F ENL +G G + +V G+ + G I V ++ K D + + ++E+
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 118 IGHV-CHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK------ 169
+ + H N+++LLG C +G +YLIF++ G + + E ++ ++
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 170 ---------------IAVGTARGLHYLH-KGCQRRIIHRDIKSSNILLTADFEPQISDFG 213
A A+G+ +L K C +HRD+ + N+L+T +I DFG
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFG 217
Query: 214 LAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
LA+ + S + +APE GI K+DV+++G+ L EI S G P G
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 78
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI +F GS+ E+ +HK + + L Y + C
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLR-----------EYLQKHKERIDHIKLLQYTSQIC 127
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 34/245 (13%)
Query: 56 FSFEEISIATNAFSSE---------NLVGRGGYAEVYKGVLQ-DGEE---IAVKRLTKVV 102
F+FE+ + A F+ E ++G G + EV G L+ G+ +A+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 103 TDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPG 161
TD ++ ++FL+E +G HPN++ L G + +I ++ GS+ + +
Sbjct: 70 TD-KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-- 126
Query: 162 VEWKVRHKIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL- 218
+ V + + G G+ YL +HRD+ + NIL+ ++ ++SDFG+++ L
Sbjct: 127 -RFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
Query: 219 ----PSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPV-DG 272
+ T PI T APE + +DV+++G+ + E++S G +P D
Sbjct: 183 DDPEAAYTTRGGKIPIRWT----APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
Query: 273 SHQSL 277
S+Q +
Sbjct: 239 SNQDV 243
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 39/284 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 84
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKV------------RHKIAV 172
++LLG C G L +I +F G++++ + V +KV H I
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 173 G--TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ +
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGT 259
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 260 RMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 294
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 39/284 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 93
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKV------------RHKIAV 172
++LLG C G L +I +F G++++ + V +KV H I
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 173 G--TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ +
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGT 268
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 269 RMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 303
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 95
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWK------------VRHKIAV 172
++LLG C G L +I +F G++++ + V +K + H I
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 173 G--TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 156 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGE 289
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGT 270
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 271 RMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 305
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 25/224 (11%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
S+AT+ + +G G Y VYK +D L V + I T+ V
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 122 C---------HPNVLSLLGCCVDN------GLYLIFQFSSRGSVASLFHDVNSPGVEWKV 166
HPNV+ L+ C + + L+F+ + + + PG+ +
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAET 121
Query: 167 RHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS 226
+ RGL +LH C I+HRD+K NIL+T+ +++DFGLA+ Q +
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---A 175
Query: 227 IAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
+ P+ T + APE + D+++ G E+ RKP+
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 64 ATNAFSSENLVGRGGYAEVYKGVLQ--DGEEIAVK-RLTKVVTDDRKEKEFLTEIGTIGH 120
ATN S + +VG G + EV G L+ +EI+V + KV +++ ++FL E +G
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 121 VCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLF--HDVNSPGVEWKVRHKIAV--GTA 175
HPN++ L G + + ++ + GS+ S HD ++ V + + G A
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIA 128
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-----PSQWTHHSIAPI 230
G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L + T PI
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
T +PE + +DV+++G+ L E++S G +P
Sbjct: 186 RWT----SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 37/282 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 95
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWK----------VRHKI--AV 172
++LLG C G L +I +F G++++ + V +K + H I +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ +
Sbjct: 156 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIE 291
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGTRM 270
Query: 292 KLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 271 RAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 303
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 35/284 (12%)
Query: 68 FSSENL-----VGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
F++E+L +GRG Y V K V + G+ +AVKR+ V D++++K+ L ++ +
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRS 77
Query: 122 CH-PNVLSLLGCCVDNG-LYLIFQFSSRG------SVASLFHDVNSPGVEWKVRHKIAVG 173
P ++ G G ++ + S V S+ DV + ++ KI +
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV----IPEEILGKITLA 133
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT 233
T + L++L + +IIHRDIK SNILL ++ DFG++ L A G
Sbjct: 134 TVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA---GC 188
Query: 234 FGHLAPEYFMHGI----VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGE 289
++APE D ++DV++ G+ L E+ +GR P W +
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP-------YPKWNSVFDQLTQ 241
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ K P+L + + +LC+ + RP E+L+
Sbjct: 242 VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 38/283 (13%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 94
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWK-----------VRHKIAVG 173
++LLG C G L +I +F G++++ + V +K + H I
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 174 --TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE 231
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 232 GTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEI 290
+APE + ++DV++FGV L EI S G P G + L +G
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGTR 269
Query: 291 EKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ D Y T L+ C P+ RPT SE++E
Sbjct: 270 MRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 303
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G VY + + G+E+A++++ + K++ + EI + +PN+++ L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 133 -CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
V + L+++ ++ + GS+ + V ++ + + L +LH ++IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDV---VTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
RDIKS NILL D +++DFG + + + S + GT +APE K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRKAYGPKV 198
Query: 252 DVFAFGVFLLEIISGRKP 269
D+++ G+ +E+I G P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G VY + + G+E+A++++ + K++ + EI + +PN+++ L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 133 -CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
V + L+++ ++ + GS+ + V ++ + + L +LH ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDV---VTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
RDIKS NILL D +++DFG + + + S + GT +APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRKAYGPKV 197
Query: 252 DVFAFGVFLLEIISGRKP 269
D+++ G+ +E+I G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G VY + + G+E+A++++ + K++ + EI + +PN+++ L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 133 -CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
V + L+++ ++ + GS+ + V ++ + + L +LH ++IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDV---VTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 192 RDIKSSNILLTADFEPQISDFGL-AKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
RDIKS NILL D +++DFG A+ P Q + GT +APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV---GTPYWMAPEVVTRKAYGPK 196
Query: 251 TDVFAFGVFLLEIISGRKP 269
D+++ G+ +E+I G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 30/222 (13%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
+G+G + EV++G + GEE+AVK + R+E+ + EI + H N+L +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 65
Query: 132 C-CVDNG----LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
DNG L+L+ + GS LF +N V + K+A+ TA GL +LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGS---LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAP 239
G Q + I HRD+KS NIL+ + I+D GLA S IAP GT ++AP
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 240 EYF------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
E H ++ D++A G+ E I+ R + G H+
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHE 223
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 24/262 (9%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V+ G + +++A+K + + E++F+ E + + HP ++ L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
++ + L+F+F G ++ + + + G+ YL + +IHR
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEA---SVIHR 127
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT 251
D+ + N L+ + ++SDFG+ ++ L Q+T + + +PE F K+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA--SPEVFSFSRYSSKS 185
Query: 252 DVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
DV++FGV + E+ S G+ P + S + + + +L PRL + +N
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNH- 239
Query: 311 AFAASLCIRASPTWRPTMSEVL 332
C + P RP S +L
Sbjct: 240 ------CWKERPEDRPAFSRLL 255
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
+AT+ + +G G Y VYK G +A+K + ++ + E+ + +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 122 C---HPNVLSLLGCCVDN------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV 172
HPNV+ L+ C + + L+F+ + + + PG+ + +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
RGL +LH C I+HRD+K NIL+T+ +++DFGLA+ Q ++AP+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALAPVVV 173
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
T + APE + D+++ G E+ RKP+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 18/210 (8%)
Query: 71 ENLVGRGGYAEVYKGVLQ-DGEE---IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
E ++G G + EV G L+ G+ +A+K L T+ ++ ++FL+E +G HPNV
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE-KQRRDFLSEASIMGQFDHPNV 70
Query: 127 LSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GTARGLHYLHK 183
+ L G + + +I +F GS+ S + ++ V + + G A G+ YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYL-- 125
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL---PSQWTHHSIAPIEGTFGHLAPE 240
+HR + + NIL+ ++ ++SDFGL+++L S T+ S + APE
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ +DV+++G+ + E++S G +P
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 30/222 (13%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
+G+G + EV++G + GEE+AVK + R+E+ + EI + H N+L +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 70
Query: 132 C-CVDNG----LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
DNG L+L+ + GS LF +N V + K+A+ TA GL +LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGS---LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAP 239
G Q + I HRD+KS NIL+ + I+D GLA S IAP GT ++AP
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 240 EYF------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
E H ++ D++A G+ E I+ R + G H+
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHE 228
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 30/222 (13%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
+G+G + EV++G + GEE+AVK + R+E+ + EI + H N+L +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 90
Query: 132 C-CVDNG----LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
DNG L+L+ + GS LF +N V + K+A+ TA GL +LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGS---LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 147
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAP 239
G Q + I HRD+KS NIL+ + I+D GLA S IAP GT ++AP
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 240 EYF------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
E H ++ D++A G+ E I+ R + G H+
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHE 248
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 30/222 (13%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
+G+G + EV++G + GEE+AVK + R+E+ + EI + H N+L +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 103
Query: 132 C-CVDNG----LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
DNG L+L+ + GS LF +N V + K+A+ TA GL +LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGS---LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 160
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAP 239
G Q + I HRD+KS NIL+ + I+D GLA S IAP GT ++AP
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 240 EYFMHGIVD------EKTDVFAFGVFLLEIISGRKPVDGSHQ 275
E I ++ D++A G+ E I+ R + G H+
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHE 261
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 30/222 (13%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
+G+G + EV++G + GEE+AVK + R+E+ + EI + H N+L +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 64
Query: 132 C-CVDNG----LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
DNG L+L+ + GS LF +N V + K+A+ TA GL +LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGS---LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAP 239
G Q + I HRD+KS NIL+ + I+D GLA S IAP GT ++AP
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 240 EYF------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
E H ++ D++A G+ E I+ R + G H+
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHE 222
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 30/222 (13%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
+G+G + EV++G + GEE+AVK + R+E+ + EI + H N+L +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK-----IFSSREERSWFREAEIYQTVMLRHENILGFIA 67
Query: 132 C-CVDNG----LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
DNG L+L+ + GS LF +N V + K+A+ TA GL +LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGS---LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAP 239
G Q + I HRD+KS NIL+ + I+D GLA S IAP GT ++AP
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 240 EYF------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
E H ++ D++A G+ E I+ R + G H+
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHE 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD---NGLYLIFQFSS 146
GE++AVK L K + + EI + ++ H N++ G C + NG+ LI +F
Sbjct: 50 GEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFE 206
GS+ + N + K + K AV +G+ YL R+ +HRD+ + N+L+ ++ +
Sbjct: 109 SGSLKE-YLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQ 164
Query: 207 PQISDFGLAKWLPSQWTHHSIA-PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+I DFGL K + + ++ + APE M +DV++FGV L E+++
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 70/297 (23%)
Query: 74 VGRGGYAEVYKGVLQD---GE---EIAVKRLTKVVTDDRKEKEFLTEIGTI-GHVCHPNV 126
+G+G + VY+G +D GE +AVK + + + R+ EFL E + G CH +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCH-HV 82
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEWKVRH---KIAVGTAR 176
+ LLG V G ++ + + G + S + N+PG ++A A
Sbjct: 83 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--------------WLPSQW 222
G+ YL+ ++ +HRD+ + N ++ DF +I DFG+ + LP +W
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+APE G+ +D+++FGV L EI S +P G
Sbjct: 199 --------------MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------- 235
Query: 282 KPILNQGEIEKLVDPRLQGAYDVTQLN---RLAFAASLCIRASPTWRPTMSEVLEVM 335
L+ ++ K V + G Y N R+ +C + +P RPT E++ ++
Sbjct: 236 ---LSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD---NGLYLIFQFSS 146
GE++AVK L K + + EI + ++ H N++ G C + NG+ LI +F
Sbjct: 38 GEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFE 206
GS+ + N + K + K AV +G+ YL R+ +HRD+ + N+L+ ++ +
Sbjct: 97 SGSLKE-YLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQ 152
Query: 207 PQISDFGLAKWLPSQWTHHSIA-PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+I DFGL K + + ++ + APE M +DV++FGV L E+++
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 68/296 (22%)
Query: 74 VGRGGYAEVYKGVLQD---GE---EIAVKRLTKVVTDDRKEKEFLTEIGTI-GHVCHPNV 126
+G+G + VY+G +D GE +AVK + + + R+ EFL E + G CH +V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCH-HV 79
Query: 127 LSLLGCCVDNGLYLI-FQFSSRGSVASLFHDV-----NSPGVEWKVRH---KIAVGTARG 177
+ LLG L+ + + G + S + N+PG ++A A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--------------WLPSQWT 223
+ YL+ ++ +HRD+ + N ++ DF +I DFG+ + LP +W
Sbjct: 140 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW- 195
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAK 282
+APE G+ +D+++FGV L EI S +P G
Sbjct: 196 -------------MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---------- 232
Query: 283 PILNQGEIEKLVDPRLQGAYDVTQLN---RLAFAASLCIRASPTWRPTMSEVLEVM 335
L+ ++ K V + G Y N R+ +C + +P RPT E++ ++
Sbjct: 233 --LSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 70/297 (23%)
Query: 74 VGRGGYAEVYKGVLQD---GE---EIAVKRLTKVVTDDRKEKEFLTEIGTI-GHVCHPNV 126
+G+G + VY+G +D GE +AVK + + + R+ EFL E + G CH +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCH-HV 82
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEWKVRH---KIAVGTAR 176
+ LLG V G ++ + + G + S + N+PG ++A A
Sbjct: 83 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--------------WLPSQW 222
G+ YL+ ++ +HRD+ + N ++ DF +I DFG+ + LP +W
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+APE G+ +D+++FGV L EI S +P G
Sbjct: 199 --------------MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------- 235
Query: 282 KPILNQGEIEKLVDPRLQGAYDVTQLN---RLAFAASLCIRASPTWRPTMSEVLEVM 335
L+ ++ K V + G Y N R+ +C + +P RPT E++ ++
Sbjct: 236 ---LSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G VY + + G+E+A++++ + K++ + EI + +PN+++ L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 133 -CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
V + L+++ ++ + GS+ + V ++ + + L +LH ++IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDV---VTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 192 RDIKSSNILLTADFEPQISDFGL-AKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
R+IKS NILL D +++DFG A+ P Q ++ GT +APE K
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGPK 197
Query: 251 TDVFAFGVFLLEIISGRKP 269
D+++ G+ +E+I G P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 76
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 125
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHR++ + NIL+ + +I DFGL K LP ++ + P E
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 186 APESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 68/296 (22%)
Query: 74 VGRGGYAEVYKGVLQD---GE---EIAVKRLTKVVTDDRKEKEFLTEIGTI-GHVCHPNV 126
+G+G + VY+G +D GE +AVK + + + R+ EFL E + G CH +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCH-HV 82
Query: 127 LSLLGCCVDNGLYLI-FQFSSRGSVASLFHDV-----NSPGVEWKVRH---KIAVGTARG 177
+ LLG L+ + + G + S + N+PG ++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--------------WLPSQWT 223
+ YL+ ++ +HRD+ + N ++ DF +I DFG+ + LP +W
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW- 198
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAK 282
+APE G+ +D+++FGV L EI S +P G
Sbjct: 199 -------------MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---------- 235
Query: 283 PILNQGEIEKLVDPRLQGAYDVTQLN---RLAFAASLCIRASPTWRPTMSEVLEVM 335
L+ ++ K V + G Y N R+ +C + +P RPT E++ ++
Sbjct: 236 --LSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKE-----FLTEIGTIGHVCHPNVLS 128
+G GG + VY L + + +K K + +EKE F E+ + H N++S
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 129 LLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA--------RGLHY 180
++ ++ Y + G S + + + P ++V TA G+ +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---------LSVDTAINFTNQILDGIKH 126
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPE 240
H RI+HRDIK NIL+ ++ +I DFG+AK L S+ + + GT + +PE
Sbjct: 127 AH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYFSPE 182
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
DE TD+++ G+ L E++ G P +G
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 70/297 (23%)
Query: 74 VGRGGYAEVYKGVLQD---GE---EIAVKRLTKVVTDDRKEKEFLTEIGTI-GHVCHPNV 126
+G+G + VY+G +D GE +AVK + + + R+ EFL E + G CH +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCH-HV 82
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEWKVRH---KIAVGTAR 176
+ LLG V G ++ + + G + S + N+PG ++A A
Sbjct: 83 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--------------WLPSQW 222
G+ YL+ ++ +HRD+ + N ++ DF +I DFG+ + LP +W
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+APE G+ +D+++FGV L EI S +P G
Sbjct: 199 --------------MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------- 235
Query: 282 KPILNQGEIEKLVDPRLQGAYDVTQLN---RLAFAASLCIRASPTWRPTMSEVLEVM 335
L+ ++ K V + G Y N R+ +C + +P RPT E++ ++
Sbjct: 236 ---LSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 70/297 (23%)
Query: 74 VGRGGYAEVYKGVLQD---GE---EIAVKRLTKVVTDDRKEKEFLTEIGTI-GHVCHPNV 126
+G+G + VY+G +D GE +AVK + + + R+ EFL E + G CH +V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCH-HV 81
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEWKVRH---KIAVGTAR 176
+ LLG V G ++ + + G + S + N+PG ++A A
Sbjct: 82 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--------------WLPSQW 222
G+ YL+ ++ +HRD+ + N ++ DF +I DFG+ + LP +W
Sbjct: 141 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+APE G+ +D+++FGV L EI S +P G
Sbjct: 198 --------------MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------- 234
Query: 282 KPILNQGEIEKLVDPRLQGAYDVTQLN---RLAFAASLCIRASPTWRPTMSEVLEVM 335
L+ ++ K V + G Y N R+ +C + +P RPT E++ ++
Sbjct: 235 ---LSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 79
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 128
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 78
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 127
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 80
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 129
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 108/224 (48%), Gaps = 40/224 (17%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
VG+G Y EV++G L GE +AVK + R E+ + TEI + H N+L +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK-----IFSSRDEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 132 CCV-----DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
+ L+LI + GS L+ + +E + ++AV A GL +LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGS---LYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA--PIEGTFGHLAP 239
G Q + I HRD KS N+L+ ++ + I+D GLA + I P GT ++AP
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 240 EYFMHGIVDEK-----------TDVFAFGVFLLEIISGRKPVDG 272
E ++DE+ TD++AFG+ L E I+ R V+G
Sbjct: 187 E-----VLDEQIRTDCFESYKWTDIWAFGLVLWE-IARRTIVNG 224
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 106
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 155
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 82
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 131
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQ-DGEE---IAVKRLTKVVTDDRKEKEFLTEIGTI 118
I + E ++G G + EV G L+ G+ +A+K L TD ++ ++FL+E +
Sbjct: 11 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD-KQRRDFLSEASIM 69
Query: 119 GHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GTA 175
G HPN++ L G + +I ++ GS+ + + + V + + G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIG 126
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-----PSQWTHHSIAPI 230
G+ YL +HRD+ + NIL+ ++ ++SDFG+++ L + T PI
Sbjct: 127 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPV-DGSHQSL 277
T APE + +DV+++G+ + E++S G +P D S+Q +
Sbjct: 184 RWT----APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 228
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 75
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 124
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 75
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 124
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 74
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 123
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 81
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 130
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQ-DGEE---IAVKRLTKVVTDDRKEKEFLTEIGTI 118
I + E ++G G + EV G L+ G+ +A+K L TD ++ ++FL+E +
Sbjct: 5 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD-KQRRDFLSEASIM 63
Query: 119 GHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GTA 175
G HPN++ L G + +I ++ GS+ + + + V + + G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIG 120
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-----PSQWTHHSIAPI 230
G+ YL +HRD+ + NIL+ ++ ++SDFG+++ L + T PI
Sbjct: 121 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPV-DGSHQSL 277
T APE + +DV+++G+ + E++S G +P D S+Q +
Sbjct: 178 RWT----APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 222
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 73
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 122
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 36/241 (14%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGVL------QDGEEIAVKRLTKVVTDDRKEKEF 111
+EIS++ F E +G + +VYKG L + + +A+K L +E EF
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EF 76
Query: 112 LTEIGTIGHVCHPNVLSLLGCCV-DNGLYLIFQFSSRGSVASLF------HDVNSPGVEW 164
E + HPNV+ LLG D L +IF + S G + DV S +
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 165 KVRHKI--------AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
V+ + A G+ YL ++H+D+ + N+L+ +ISD GL +
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 217 WLPS----QWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVD 271
+ + + +S+ PI +APE M+G +D++++GV L E+ S G +P
Sbjct: 194 EVYAADYYKLLGNSLLPIRW----MAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249
Query: 272 G 272
G
Sbjct: 250 G 250
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 54 RCFSFEEISIATNAFSSENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKEK 109
R F+ E I + E ++G G EV G L Q +A+K L T+ R+ +
Sbjct: 40 RSFTRE---IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE-RQRR 95
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIF-QFSSRGSVASLFHDVNSPGVEWKVRH 168
+FL+E +G HPN++ L G L +I ++ GS+ + + ++ +
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG---QFTIMQ 152
Query: 169 KIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-----PSQ 221
+ + G G+ YL +HRD+ + N+L+ ++ ++SDFGL++ L +
Sbjct: 153 LVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 222 WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
T PI T APE +DV++FGV + E+++ G +P
Sbjct: 210 TTTGGKIPIRWT----APEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I + H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKLNHQNIV 97
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 156
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 212
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 213 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 75
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 124
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 93
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 142
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I + H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKLNHQNIV 111
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 170
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 226
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 227 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 93
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ +HK + + L Y + C
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----------KHKERIDHIKLLQYTSQIC 142
Query: 186 Q-------RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+ +R IHRD+ + NIL+ + +I DFGL K LP + P E
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
APE +DV++FGV L E+ +
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 13/216 (6%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQD--GEEI--AVKRLTKVVTDDRKEKEFLTEI 115
+ IA ++G G + EVY+GV + GE+I AVK K T D KEK F++E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEA 76
Query: 116 GTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVAS-LFHDVNSPGVEWKVRHKIAVGT 174
+ ++ HP+++ L+G + ++I + G + L + NS V V + + +
Sbjct: 77 VIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI-- 134
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
+ + YL +HRDI NIL+ + ++ DFGL++++ + ++ +
Sbjct: 135 CKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPI 190
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
++PE +DV+ F V + EI+S G++P
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 13/216 (6%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQD--GEEI--AVKRLTKVVTDDRKEKEFLTEI 115
+ IA ++G G + EVY+GV + GE+I AVK K T D KEK F++E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEA 60
Query: 116 GTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVAS-LFHDVNSPGVEWKVRHKIAVGT 174
+ ++ HP+++ L+G + ++I + G + L + NS V V + + +
Sbjct: 61 VIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI-- 118
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
+ + YL +HRDI NIL+ + ++ DFGL++++ + ++ +
Sbjct: 119 CKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPI 174
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
++PE +DV+ F V + EI+S G++P
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 13/216 (6%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQD--GEEI--AVKRLTKVVTDDRKEKEFLTEI 115
+ IA ++G G + EVY+GV + GE+I AVK K T D KEK F++E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEA 64
Query: 116 GTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVAS-LFHDVNSPGVEWKVRHKIAVGT 174
+ ++ HP+++ L+G + ++I + G + L + NS V V + + +
Sbjct: 65 VIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI-- 122
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
+ + YL +HRDI NIL+ + ++ DFGL++++ + ++ +
Sbjct: 123 CKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPI 178
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
++PE +DV+ F V + EI+S G++P
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 73 LVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
++G+G Y VY G L + IA+K + + D R + EI H+ H N++ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE--RDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 132 CCVDNGLYLIF-QFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR---GLHYLHKGCQR 187
+NG IF + GS+++L P + + I T + GL YLH
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE--QTIGFYTKQILEGLKYLH---DN 141
Query: 188 RIIHRDIKSSNILL-TADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+I+HRDIK N+L+ T +ISDFG +K L + GT ++APE G
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGP 199
Query: 247 --VDEKTDVFAFGVFLLEIISGRKP 269
+ D+++ G ++E+ +G+ P
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 54 RCFSFEEISIATNAFSSENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKEK 109
R F+ E I + E ++G G EV G L Q +A+K L T+ R+ +
Sbjct: 40 RSFTRE---IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE-RQRR 95
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIF-QFSSRGSVASLFHDVNSPGVEWKVRH 168
+FL+E +G HPN++ L G L +I ++ GS+ + + ++ +
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG---QFTIMQ 152
Query: 169 KIAV--GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-----PSQ 221
+ + G G+ YL +HRD+ + N+L+ ++ ++SDFGL++ L +
Sbjct: 153 LVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 222 WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
T PI T APE +DV++FGV + E+++ G +P
Sbjct: 210 TTTGGKIPIRWT----APEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
+AT+ + +G G Y VYK G +A+K + ++ + E+ + +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 122 C---HPNVLSLLGCCVDN------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV 172
HPNV+ L+ C + + L+F+ + + + PG+ + +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
RGL +LH C I+HRD+K NIL+T+ +++DFGLA+ Q ++ P+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALDPVVV 173
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
T + APE + D+++ G E+ RKP+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 70/297 (23%)
Query: 74 VGRGGYAEVYKGVLQD---GE---EIAVKRLTKVVTDDRKEKEFLTEIGTI-GHVCHPNV 126
+G+G + VY+G +D GE +AVK + + + R+ EFL E + G CH +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCH-HV 82
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEWKVRH---KIAVGTAR 176
+ LLG V G ++ + + G + S + N+PG ++A A
Sbjct: 83 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--------------WLPSQW 222
G+ YL+ ++ +HR++ + N ++ DF +I DFG+ + LP +W
Sbjct: 142 GMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+APE G+ +D+++FGV L EI S +P G
Sbjct: 199 --------------MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------- 235
Query: 282 KPILNQGEIEKLVDPRLQGAYDVTQLN---RLAFAASLCIRASPTWRPTMSEVLEVM 335
L+ ++ K V + G Y N R+ +C + +P RPT E++ ++
Sbjct: 236 ---LSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 70/297 (23%)
Query: 74 VGRGGYAEVYKGVLQD---GE---EIAVKRLTKVVTDDRKEKEFLTEIGTI-GHVCHPNV 126
+G+G + VY+G +D GE +AVK + + + R+ EFL E + G CH +V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCH-HV 83
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEWKVRH---KIAVGTAR 176
+ LLG V G ++ + + G + S + N+PG ++A A
Sbjct: 84 VRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--------------WLPSQW 222
G+ YL+ ++ +HR++ + N ++ DF +I DFG+ + LP +W
Sbjct: 143 GMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+APE G+ +D+++FGV L EI S +P G
Sbjct: 200 --------------MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------- 236
Query: 282 KPILNQGEIEKLVDPRLQGAYDVTQLN---RLAFAASLCIRASPTWRPTMSEVLEVM 335
L+ ++ K V + G Y N R+ +C + +P RPT E++ ++
Sbjct: 237 ---LSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 35/240 (14%)
Query: 74 VGRGGYAEVYK----GVL--QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + V++ G+L + +AVK L + + D + +F E + +PN++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD-MQADFQREAALMAEFDNPNIV 113
Query: 128 SLLG-CCVDNGLYLIFQFSSRG------------SVASLFHD-------VNSPG---VEW 164
LLG C V + L+F++ + G +V SL H V+SPG +
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 165 KVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH 224
+ IA A G+ YL +R+ +HRD+ + N L+ + +I+DFGL++ + S +
Sbjct: 174 AEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 225 HSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG-SHQSLHSWAK 282
+ + PE + ++DV+A+GV L EI S G +P G +H+ + + +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR 290
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 64 ATNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
+ + + LVG G Y V K +D G +A+K+ + D +K + EI + +
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 123 HPNVLSLLGCCVDNGL-YLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYL 181
H N+++LL C YL+F+F + L ++ G++++V K G+ +
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDL--ELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL--PSQWTHHSIAPIEGTFGHLAP 239
H IIHRDIK NIL++ ++ DFG A+ L P + +A T + AP
Sbjct: 141 H---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA----TRWYRAP 193
Query: 240 EYFMHGI-VDEKTDVFAFGVFLLEIISG 266
E + + + DV+A G + E+ G
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 36/241 (14%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGVL------QDGEEIAVKRLTKVVTDDRKEKEF 111
+EIS++ F E +G + +VYKG L + + +A+K L +E EF
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EF 59
Query: 112 LTEIGTIGHVCHPNVLSLLGCCV-DNGLYLIFQFSSRGSVASLF------HDVNSPGVEW 164
E + HPNV+ LLG D L +IF + S G + DV S +
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 165 KVRHKI--------AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
V+ + A G+ YL ++H+D+ + N+L+ +ISD GL +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 217 WLPS----QWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVD 271
+ + + +S+ PI +APE M+G +D++++GV L E+ S G +P
Sbjct: 177 EVYAADYYKLLGNSLLPIRW----MAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 232
Query: 272 G 272
G
Sbjct: 233 G 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 73 LVGRGGYAEVYKGV-LQDGEEIAVKRL-TKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
++G GG +EV+ L+D ++AVK L + D F E + HP ++++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 131 GCCVDNG---------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYL 181
D G Y++ ++ ++ + H P + IA + L++
Sbjct: 79 ----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIA-DACQALNFS 132
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPE 240
H Q IIHRD+K +NIL++A ++ DFG+A+ + S + A + GT +L+PE
Sbjct: 133 H---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
VD ++DV++ G L E+++G P G
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 27/247 (10%)
Query: 90 GEEIAVKRLTKVVTDDRKEKE---FLTEIGTIGHVCHPNVLSLLGC-CVDNGLYLIFQFS 145
G+++AVK++ D RK++ E+ + H NV+ + V + L+++ +F
Sbjct: 70 GKQVAVKKM-----DLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFL 124
Query: 146 SRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADF 205
G++ + V + + + + R L YLH + +IHRDIKS +ILLT+D
Sbjct: 125 EGGALTDI---VTHTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDG 178
Query: 206 EPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
++SDFG + + + GT +APE + D+++ G+ ++E+I
Sbjct: 179 RIKLSDFGFCAQVSKEVPKRKX--LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 236
Query: 266 GRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWR 325
G P + P+ I + PR++ + V+ + R F + +R P+ R
Sbjct: 237 GEPP--------YFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLR-GFLDLMLVR-EPSQR 286
Query: 326 PTMSEVL 332
T E+L
Sbjct: 287 ATAQELL 293
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
+AT+ + +G G Y VYK G +A+K + ++ + E+ + +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 122 C---HPNVLSLLGCCVDN------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV 172
HPNV+ L+ C + + L+F+ + + + PG+ + +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
RGL +LH C I+HRD+K NIL+T+ +++DFGLA+ Q ++ P+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALFPVVV 173
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
T + APE + D+++ G E+ RKP+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 97
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 156
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 212
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 213 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 113
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 172
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 173 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 228
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 229 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 24/220 (10%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQ-DGEE---IAVKRLTKVVTDDRKEKEFLTEIGTI 118
I + + E ++G G + EV G L+ G+ +A+K L KV +++ ++FL E +
Sbjct: 19 IEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTL-KVGYTEKQRRDFLGEASIM 77
Query: 119 GHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GTA 175
G HPN++ L G + + ++ ++ GS+ + + ++ V + + G +
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG---QFTVIQLVGMLRGIS 134
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-----PSQWTHHSIAPI 230
G+ YL +HRD+ + NIL+ ++ ++SDFGL++ L + T PI
Sbjct: 135 AGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 191
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
T APE +DV+++G+ + E++S G +P
Sbjct: 192 RWT----APEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 22/267 (8%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+GRG Y V K + G+ +AVKR+ V +++ + ++ V P ++ G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 133 CVDNGLYLIFQFSSRGSVASLFHDVNSPG--VEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G I S+ + V G + + KIAV + L +LH + +I
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLSVI 176
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE- 249
HRD+K SN+L+ A + ++ DFG++ +L A G ++APE + +
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA---GCKPYMAPERINPELNQKG 233
Query: 250 ---KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
K+D+++ G+ ++E+ R P D SW P ++ + P+L D
Sbjct: 234 YSVKSDIWSLGITMIELAILRFPYD-------SWGTPFQQLKQVVEEPSPQLPA--DKFS 284
Query: 307 LNRLAFAASLCIRASPTWRPTMSEVLE 333
+ F S C++ + RPT E+++
Sbjct: 285 AEFVDF-TSQCLKKNSKERPTYPELMQ 310
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F S F D ++ G+ + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 123
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 124 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 178
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D+++ G E+++ R G +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F S F D ++ G+ + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 121
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 122 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 176
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D+++ G E+++ R G +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 123
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 182
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 183 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 238
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 239 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 103
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 162
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 163 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 218
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 219 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 96
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 155
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 211
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 212 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 96
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 155
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 211
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 212 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 88
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 147
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 148 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 203
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 204 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 22/267 (8%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+GRG Y V K + G+ +AVKR+ V +++ + ++ V P ++ G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 133 CVDNGLYLIFQFSSRGSVASLFHDVNSPG--VEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G I S+ + V G + + KIAV + L +LH + +I
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSVI 132
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE- 249
HRD+K SN+L+ A + ++ DFG++ +L A G ++APE + +
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERINPELNQKG 189
Query: 250 ---KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
K+D+++ G+ ++E+ R P D SW P ++ + P+L D
Sbjct: 190 YSVKSDIWSLGITMIELAILRFPYD-------SWGTPFQQLKQVVEEPSPQLPA--DKFS 240
Query: 307 LNRLAFAASLCIRASPTWRPTMSEVLE 333
+ F S C++ + RPT E+++
Sbjct: 241 AEFVDF-TSQCLKKNSKERPTYPELMQ 266
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 73 LVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
++G+G Y VY G L + IA+K + + D R + EI H+ H N++ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE--RDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 132 CCVDNGLYLIF-QFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR---GLHYLHKGCQR 187
+NG IF + GS+++L P + + I T + GL YLH
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE--QTIGFYTKQILEGLKYLH---DN 127
Query: 188 RIIHRDIKSSNILL-TADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+I+HRDIK N+L+ T +ISDFG +K L + GT ++APE G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGP 185
Query: 247 --VDEKTDVFAFGVFLLEIISGRKP 269
+ D+++ G ++E+ +G+ P
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 111
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 170
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 226
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 227 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 8/213 (3%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ L C D+ LY ++ G + + S + L YLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHG- 155
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
+ IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 156 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 246
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 15/220 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTK-VVTDDRKEKEFLTEIGTIGH 120
+ F+ ++G+G + +V + EE+ A+K L K VV D + + E +
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 121 VCHPNVLSLLGCCVD--NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGL 178
+ P L+ L C + LY + ++ + G + V V + A + GL
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY--AAEISIGL 133
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGH 236
+LHK R II+RD+K N++L ++ +I+DFG+ K + + E GT +
Sbjct: 134 FFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK----EHMMDGVTTREFCGTPDY 186
Query: 237 LAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
+APE + + D +A+GV L E+++G+ P DG +
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 97
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 156
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW- 212
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 213 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 114
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 173
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
L + IHRDI + N LLT +I DFG+A+ + + +
Sbjct: 174 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
PE FM GI KTD ++FGV L EI S
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELDFLMEALIISKFNHQNIV 137
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 196
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
L + IHRDI + N LLT +I DFG+A+ + + +
Sbjct: 197 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS 265
PE FM GI KTD ++FGV L EI S
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKE---------KE 110
E+ + ++ + + G Y V GV +G +A+KR+ V+D R K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 111 FLTEIGTIGHVCHPNVLSLLGCCVD------NGLYLIFQFSSRGSVASLFHD---VNSPG 161
L EI + H HPN+L L V + LYL+ + R +A + HD V SP
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTEL-MRTDLAQVIHDQRIVISPQ 134
Query: 162 -VEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
+++ + H + GLH LH+ ++HRD+ NILL + + I DF LA+
Sbjct: 135 HIQYFMYHILL-----GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 124/280 (44%), Gaps = 47/280 (16%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
FS +G G + VY +++ E +A+K+++ + K ++ + E+ + + HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 126 VLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ GC + ++ +L+ ++ GS + L P E ++ + G +GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS- 172
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE---GTFGHLAPEY 241
+IHRD+K+ NILL+ ++ DFG A + AP GT +APE
Sbjct: 173 --HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---------APANXFVGTPYWMAPEV 221
Query: 242 FM---HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLV---- 294
+ G D K DV++ G+ +E ++ RKP P+ N + L
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIE-LAERKP-------------PLFNMNAMSALYHIAQ 267
Query: 295 --DPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
P LQ + + C++ P RPT SEVL
Sbjct: 268 NESPALQSGHWSEYFRNFVDS---CLQKIPQDRPT-SEVL 303
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 124/280 (44%), Gaps = 47/280 (16%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
FS +G G + VY +++ E +A+K+++ + K ++ + E+ + + HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 126 VLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ GC + ++ +L+ ++ GS + L P E ++ + G +GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS- 133
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE---GTFGHLAPEY 241
+IHRD+K+ NILL+ ++ DFG A + AP GT +APE
Sbjct: 134 --HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---------APANXFVGTPYWMAPEV 182
Query: 242 FM---HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLV---- 294
+ G D K DV++ G+ +E ++ RKP P+ N + L
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIE-LAERKP-------------PLFNMNAMSALYHIAQ 228
Query: 295 --DPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
P LQ + + C++ P RPT SEVL
Sbjct: 229 NESPALQSGHWSEYFRNFVDS---CLQKIPQDRPT-SEVL 264
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTK--VVTDDRKEKEFLTEIGTIG 119
S+ F ++GRG YA+V L+ + I R+ K +V DD TE
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 120 HVC-HPNVLSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARG 177
HP ++ L C ++ L+ + ++ + G + +FH + + + +
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLA 165
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L+YLH +R II+RD+K N+LL ++ +++D+G+ K P T + GT
Sbjct: 166 LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----STFCGTPN 218
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVD 271
++APE D +A GV + E+++GR P D
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 74 VGRGGYAEVYKGVLQDGE------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + EVY+G + ++AVK L +V ++ + E +FL E I H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSE-QDELDFLMEALIISKFNHQNIV 111
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFHDVN------SPGVEWKVRHKIAVGTARGLHY 180
+G + + +++ + + G + S + S + H +A A G Y
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQY 170
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L + IHRDI + N LLT +I DFG+A+ + S + A + +
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW- 226
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+ PE FM GI KTD ++FGV L EI S
Sbjct: 227 -MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 73 LVGRGGYAEVYKGV-LQDGEEIAVKRL-TKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
++G GG +EV+ L+D ++AVK L + D F E + HP ++++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 131 GCCVDNG---------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYL 181
D G Y++ ++ ++ + H P + IA + L++
Sbjct: 79 ----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIA-DACQALNFS 132
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPE 240
H Q IIHRD+K +NI+++A ++ DFG+A+ + S + A + GT +L+PE
Sbjct: 133 H---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
VD ++DV++ G L E+++G P G
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F S F D ++ G+ + +GL + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 122
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 123 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 177
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D+++ G E+++ R G +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKE---------KE 110
E+ + ++ + + G Y V GV +G +A+KR+ V+D R K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 111 FLTEIGTIGHVCHPNVLSLLGCCVD------NGLYLIFQFSSRGSVASLFHD---VNSPG 161
L EI + H HPN+L L V + LYL+ + R +A + HD V SP
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTEL-MRTDLAQVIHDQRIVISPQ 134
Query: 162 -VEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
+++ + H + GLH LH+ ++HRD+ NILL + + I DF LA+
Sbjct: 135 HIQYFMYHILL-----GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRK-------EKEFL 112
I + N FS ++GRGG+ EVY D G+ A+K L K ++ E+ L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 113 TEIGT--------IGHVCH-PNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVE 163
+ + T + + H P+ LS + + NG L + S G + E
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFI-LDLMNGGDLHYHLSQHGVFS-----------E 291
Query: 164 WKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWT 223
+R A GL ++H R +++RD+K +NILL +ISD GLA +
Sbjct: 292 ADMRF-YAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIV-DEKTDVFAFGVFLLEIISGRKP 269
H S+ GT G++APE G+ D D F+ G L +++ G P
Sbjct: 348 HASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 73 LVGRGGYAEVYKGV-LQDGEEIAVKRL-TKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
++G GG +EV+ L+D ++AVK L + D F E + HP ++++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 131 GCCVDNG---------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYL 181
D G Y++ ++ ++ + H P + IA + L++
Sbjct: 79 ----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIA-DACQALNFS 132
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPE 240
H Q IIHRD+K +NI+++A ++ DFG+A+ + S + A + GT +L+PE
Sbjct: 133 H---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
VD ++DV++ G L E+++G P G
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRK-------EKEFL 112
I + N FS ++GRGG+ EVY D G+ A+K L K ++ E+ L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 113 TEIGT--------IGHVCH-PNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVE 163
+ + T + + H P+ LS + + NG L + S G + E
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFI-LDLMNGGDLHYHLSQHGVFS-----------E 290
Query: 164 WKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWT 223
+R A GL ++H R +++RD+K +NILL +ISD GLA +
Sbjct: 291 ADMRF-YAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 346
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIV-DEKTDVFAFGVFLLEIISGRKP 269
H S+ GT G++APE G+ D D F+ G L +++ G P
Sbjct: 347 HASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 74 VGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL--- 129
+G GG+ V + + QD GE++A+K+ + ++ +E+ + EI + + HPNV+S
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER-WCLEIQIMKKLNHPNVVSAREV 81
Query: 130 ---LGCCVDNGLYLI-FQFSSRGSVASLFHDV-NSPGVEWKVRHKIAVGTARGLHYLHKG 184
L N L L+ ++ G + + N G++ + + L YLH+
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 185 CQRRIIHRDIKSSNILLTADFEPQ-----ISDFGLAKWLPSQWTHHSIAPIEGTFGHLAP 239
RIIHRD+K NI+L PQ I D G AK L GT +LAP
Sbjct: 142 ---RIIHRDLKPENIVLQPG--PQRLIHKIIDLGYAKELDQ---GELCTEFVGTLQYLAP 193
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
E D ++FG E I+G +P
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F S F D ++ G+ + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 123
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 178
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D+++ G E+++ R G +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 74 VGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL--- 129
+G GG+ V + + QD GE++A+K+ + ++ +E+ + EI + + HPNV+S
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER-WCLEIQIMKKLNHPNVVSAREV 80
Query: 130 ---LGCCVDNGLYLI-FQFSSRGSVASLFHDV-NSPGVEWKVRHKIAVGTARGLHYLHKG 184
L N L L+ ++ G + + N G++ + + L YLH+
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 185 CQRRIIHRDIKSSNILLTADFEPQ-----ISDFGLAKWLPSQWTHHSIAPIEGTFGHLAP 239
RIIHRD+K NI+L PQ I D G AK L GT +LAP
Sbjct: 141 ---RIIHRDLKPENIVLQPG--PQRLIHKIIDLGYAKELDQ---GELCTEFVGTLQYLAP 192
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
E D ++FG E I+G +P
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 25/221 (11%)
Query: 71 ENLVGRGGYAEVYKGVLQ-DGEE---IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
E ++G G + EV G L+ G+ +A+K L KV +++ ++FL E +G HPNV
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL-KVGYTEKQRRDFLCEASIMGQFDHPNV 106
Query: 127 LSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV--GTARGLHYLHK 183
+ L G + ++ +F G++ + + ++ V + + G A G+ YL
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG---QFTVIQLVGMLRGIAAGMRYL-- 161
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ-----WTHHSIAPIEGTFGHLA 238
+HRD+ + NIL+ ++ ++SDFGL++ + T P+ T A
Sbjct: 162 -ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT----A 216
Query: 239 PEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPV-DGSHQSL 277
PE + +DV+++G+ + E++S G +P D S+Q +
Sbjct: 217 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 257
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRK-------EKEFL 112
I + N FS ++GRGG+ EVY D G+ A+K L K ++ E+ L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 113 TEIGT--------IGHVCH-PNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVE 163
+ + T + + H P+ LS + + NG L + S G + E
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFI-LDLMNGGDLHYHLSQHGVFS-----------E 291
Query: 164 WKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWT 223
+R A GL ++H R +++RD+K +NILL +ISD GLA +
Sbjct: 292 ADMRF-YAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIV-DEKTDVFAFGVFLLEIISGRKP 269
H S+ GT G++APE G+ D D F+ G L +++ G P
Sbjct: 348 HASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRK-------EKEFL 112
I + N FS ++GRGG+ EVY D G+ A+K L K ++ E+ L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 113 TEIGT--------IGHVCH-PNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVE 163
+ + T + + H P+ LS + + NG L + S G + E
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFI-LDLMNGGDLHYHLSQHGVFS-----------E 291
Query: 164 WKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWT 223
+R A GL ++H R +++RD+K +NILL +ISD GLA +
Sbjct: 292 ADMRF-YAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIV-DEKTDVFAFGVFLLEIISGRKP 269
H S+ GT G++APE G+ D D F+ G L +++ G P
Sbjct: 348 HASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQD--LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 123
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 178
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 66 NAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP 124
+ S VG G Y V + + GE++A+K+L++ + K E+ + H+ H
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 125 NVLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARG 177
NV+ LL YL+ F + + + +++ V + +G
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQML-----KG 156
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
L Y+H ++HRD+K N+ + D E +I DFGLA+ ++ T + + T +
Sbjct: 157 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV-----TRWYR 208
Query: 238 APEYFMHGI-VDEKTDVFAFGVFLLEIISGRKPVDGSH------QSLHSWAKPILNQGEI 290
APE + + ++ D+++ G + E+++G+ G Q L P +
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP--GTEFV 266
Query: 291 EKLVDPRLQGAYD-VTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLEGDQIDK 343
+KL D + + Q R F L RAS P +++LE MLE D +DK
Sbjct: 267 QKLNDKAAKSYIQSLPQTPRKDF-TQLFPRAS----PQAADLLEKMLELD-VDK 314
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 31/211 (14%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
VG+G Y EV++G Q GE +AVK + R EK + TE+ + H N+L +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 132 CCV-----DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
+ L+LI + GS+ V +I + A GL +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL---RIVLSIASGLAHLHIEIF 126
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHH---SIAPIEGTFGHLA 238
G Q + I HRD+KS NIL+ + + I+D GLA + SQ T+ P GT ++A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 239 PEYFMHGI-VD-----EKTDVFAFGVFLLEI 263
PE I VD ++ D++AFG+ L E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 243 M-HGIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 175
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 175
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D+++ G E+++ R G +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 122
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 123 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 177
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 123
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 178
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 122
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 123 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 177
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 127
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 182
Query: 243 M-HGIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 175
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 174
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y VYK GE A+K++ D+ + EI + + H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 134 -VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
L L+F+ + L DV G+E + G+ Y H RR++HR
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHR 124
Query: 193 DIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
D+K N+L+ + E +I+DFGLA+ +P + H I T + AP+ M
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLMGSKKYST 180
Query: 251 T-DVFAFGVFLLEIISG 266
T D+++ G E+++G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 174
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 175
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL---- 130
RG + V+K L + + +AVK D++ + EI + + H N+L +
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 131 -GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK------ 183
G ++ L+LI F +GS+ + + W +A +RGL YLH+
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDY---LKGNIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 184 --GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL----PSQWTHHSIAPIEGTFGHL 237
G + I HRD KS N+LL +D ++DFGLA P TH + GT ++
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV----GTRRYM 192
Query: 238 APEYFMHGIVDE-----KTDVFAFGVFLLEIISGRKPVDG 272
APE I + + D++A G+ L E++S K DG
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG 232
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 31/211 (14%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
VG+G Y EV++G Q GE +AVK + R EK + TE+ + H N+L +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 132 CCV-----DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
+ L+LI + GS+ V +I + A GL +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL---RIVLSIASGLAHLHIEIF 126
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHH---SIAPIEGTFGHLA 238
G Q + I HRD+KS NIL+ + + I+D GLA + SQ T+ P GT ++A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 239 PEYFMHGI-VD-----EKTDVFAFGVFLLEI 263
PE I VD ++ D++AFG+ L E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 74 VGRGGYAEV---YKGVLQD--GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G+G + V LQD GE +AVK+L + + ++F EI + + H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVK 78
Query: 129 LLGCCVDNG---LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
G C G L LI ++ GS+ ++ ++ + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-AHAERIDHIKLLQYTSQICKGMEYL---G 134
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHLAPEYFMH 244
+R IHRD+ + NIL+ + +I DFGL K LP + P E APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 245 GIVDEKTDVFAFGVFLLEIIS 265
+DV++FGV L E+ +
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 122
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 123 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 177
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 124
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 125 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 179
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 31/211 (14%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFL--TEIGTIGHVCHPNVLSLLG 131
VG+G Y EV++G Q GE +AVK + R EK + TE+ + H N+L +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVK-----IFSSRDEKSWFRETELYNTVMLRHENILGFIA 98
Query: 132 CCV-----DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK--- 183
+ L+LI + GS+ V +I + A GL +LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL---RIVLSIASGLAHLHIEIF 155
Query: 184 GCQRR--IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHH---SIAPIEGTFGHLA 238
G Q + I HRD+KS NIL+ + + I+D GLA + SQ T+ P GT ++A
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 239 PEYFMHGI-VD-----EKTDVFAFGVFLLEI 263
PE I VD ++ D++AFG+ L E+
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 73 LVGRGGYAEVYKGVLQDGEEI-AVKRLTK-VVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
++G+G + +V + +E+ AVK L K VV D + + E + P L+ L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 131 GCCVD--NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI--AVGTARGLHYLHKGCQ 186
C + LY + ++ + G L + + G +K H + A A GL +L
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGD---LMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---S 139
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+ II+RD+K N++L ++ +I+DFG+ K + W + GT ++APE +
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
+ D +AFGV L E+++G+ P +G +
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 123
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 178
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 127
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 182
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D+++ G E+++ R G +
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 216
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 121
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 176
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 121
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 122 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 176
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D+++ G E+++ R G +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 174
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 73 LVGRGGYAEVYKGVLQDGEEI-AVKRLTK-VVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
++G+G + +V + +E+ AVK L K VV D + + E + P L+ L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 131 GCCVD--NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI--AVGTARGLHYLHKGCQ 186
C + LY + ++ + G + V +K H + A A GL +L
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQ---S 460
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+ II+RD+K N++L ++ +I+DFG+ K + W + GT ++APE +
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D +AFGV L E+++G+ P +G +
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ T +A T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ T +A T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 121
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 176
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 174
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 121
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 176
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 23/220 (10%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTK--VVTDDRKEKEFLTEIGTIG 119
S+ F ++GRG YA+V L+ + I ++ K +V DD E + + T
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD----EDIDWVQTEK 71
Query: 120 HVC-----HPNVLSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG 173
HV HP ++ L C ++ L+ + ++ + G + +FH + + +
Sbjct: 72 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAE 129
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--WLPSQWTHHSIAPIE 231
+ L+YLH +R II+RD+K N+LL ++ +++D+G+ K P T +
Sbjct: 130 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----SXFC 182
Query: 232 GTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVD 271
GT ++APE D +A GV + E+++GR P D
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 124
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 125 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 179
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNA 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ T +A T + APE ++
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNW 193
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 175
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 74 VGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y V+K +D G+ +A+K+ + D +K L EI + + HPN+++LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 133 CV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
L+L+F++ + L D GV + I T + +++ HK IH
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHK---HNCIH 125
Query: 192 RDIKSSNILLTADFEPQISDFGLAKWL--PSQWTHHSIAPIEGTFGHLAPEYFMHGI-VD 248
RD+K NIL+T ++ DFG A+ L PS + +A T + +PE +
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA----TRWYRSPELLVGDTQYG 181
Query: 249 EKTDVFAFGVFLLEIISG 266
DV+A G E++SG
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y VYK GE A+K++ D+ + EI + + H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 134 -VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
L L+F+ + L DV G+E + G+ Y H RR++HR
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHR 124
Query: 193 DIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
D+K N+L+ + E +I+DFGLA+ +P + H + T + AP+ M
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKYST 180
Query: 251 T-DVFAFGVFLLEIISG 266
T D+++ G E+++G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y VYK GE A+K++ D+ + EI + + H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 134 -VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
L L+F+ + L DV G+E + G+ Y H RR++HR
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHR 124
Query: 193 DIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
D+K N+L+ + E +I+DFGLA+ +P + H + T + AP+ M
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKYST 180
Query: 251 T-DVFAFGVFLLEIISG 266
T D+++ G E+++G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTK--VVTDDRKEKEFLTEIGTIG 119
S+ F ++GRG YA+V L+ + I ++ K +V DD TE
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 120 HVC-HPNVLSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARG 177
HP ++ L C ++ L+ + ++ + G + +FH + + + +
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLA 118
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--WLPSQWTHHSIAPIEGTFG 235
L+YLH +R II+RD+K N+LL ++ +++D+G+ K P T + GT
Sbjct: 119 LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----SXFCGTPN 171
Query: 236 HLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVD 271
++APE D +A GV + E+++GR P D
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + VY + I A+K L K + + E + EI H+ HPN+L L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 132 CCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D +YLI +++ RG + S + + I A L Y H +++I
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQ--KSCTFDEQRTATIMEELADALMYCHG---KKVI 145
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRDIK N+LL E +I+DFG + PS + GT +L PE + +EK
Sbjct: 146 HRDIKPENLLLGLKGELKIADFGWSVHAPSLRR----KTMCGTLDYLPPEMIEGRMHNEK 201
Query: 251 TDVFAFGVFLLEIISGRKPVDGS 273
D++ GV E++ G P + +
Sbjct: 202 VDLWCIGVLCYELLVGNPPFESA 224
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L+K K E+ + H+ H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 156
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 157 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 209
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 193
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 37/294 (12%)
Query: 66 NAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP 124
+ S VG G Y V + + GE++A+K+L++ + K E+ + H+ H
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 125 NVLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARG 177
NV+ LL YL+ F + + +++ V + +G
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQML-----KG 138
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
L Y+H ++HRD+K N+ + D E +I DFGLA+ ++ T + + T +
Sbjct: 139 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV-----TRWYR 190
Query: 238 APEYFMHGI-VDEKTDVFAFGVFLLEIISGRKPVDGSH------QSLHSWAKPILNQGEI 290
APE + + ++ D+++ G + E+++G+ G Q L P +
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP--GTEFV 248
Query: 291 EKLVDPRLQGAYD-VTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLEGDQIDK 343
+KL D + + Q R F L RAS P +++LE MLE D +DK
Sbjct: 249 QKLNDKAAKSYIQSLPQTPRKDF-TQLFPRAS----PQAADLLEKMLELD-VDK 296
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 154
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 155 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 207
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 236
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 74 VGRGGYAEVYKGVLQDGE---EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G Y EV + +D E A+K + K + L E+ + + HPN++ L
Sbjct: 45 LGSGAYGEVL--LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 131 GCCVDN-GLYLIFQFSSRGSV-ASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRR 188
D YL+ + G + + H + V+ V I G+ YLHK
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHK---HN 156
Query: 189 IIHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
I+HRD+K N+LL + D +I DFGL+ +Q + GT ++APE +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ---KKMKERLGTAYYIAPE-VLRK 212
Query: 246 IVDEKTDVFAFGVFLLEIISGRKPVDG 272
DEK DV++ GV L +++G P G
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGG 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V ++ G +IAVK+L++ K E+ + H+ H NV+ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 173
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 174 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 226
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ + D+++ G + E+++GR G+
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGRTLFPGT 255
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 193
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV-----ATRWYRAPEIMLNW 204
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV-----ATRWYRAPEIMLNW 204
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 217
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 72 NLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
+L GR GY V AVK L + + + ++ L+E + V HP+V+ L G
Sbjct: 46 HLKGRAGYTTV-----------AVKMLKENASPS-ELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 132 CCVDNG-LYLIFQFSSRGSVASLFHDVNSPG--------------VEWKVRHKIAVG--- 173
C +G L LI +++ GS+ + G ++ + +G
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 174 -----TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA 228
++G+ YL + +++HRD+ + NIL+ + +ISDFGL++ + + ++ +
Sbjct: 154 SFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 229 PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
+A E I ++DV++FGV L EI++ G P G
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV-----ATRWYRAPEIMLNW 204
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 163
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 164 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 216
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 150 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 202
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 150
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 151 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 203
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 156 DVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLA 215
D ++PG + GL +LH QR II+RD+K N+LL D +ISD GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 216 KWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
L + T GT G +APE + D D FA GV L E+I+ R P
Sbjct: 337 VELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 204
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 156 DVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLA 215
D ++PG + GL +LH QR II+RD+K N+LL D +ISD GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 216 KWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
L + T GT G +APE + D D FA GV L E+I+ R P
Sbjct: 337 VELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 199
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 155
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 156 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 208
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 150 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 202
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 143
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 144 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 196
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 156 DVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLA 215
D ++PG + GL +LH QR II+RD+K N+LL D +ISD GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 216 KWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
L + T GT G +APE + D D FA GV L E+I+ R P
Sbjct: 337 VELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 199
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 156
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 157 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 209
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 156
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 157 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 209
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 156 DVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLA 215
D ++PG + GL +LH QR II+RD+K N+LL D +ISD GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 216 KWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
L + T GT G +APE + D D FA GV L E+I+ R P
Sbjct: 337 VELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 8/213 (3%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ L D+ LY ++ G + + S + L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS--FDETCTRFYTAEIVSALEYLHG- 150
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
+ IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 147 --DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 199
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 150
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 151 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 203
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 141
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 142 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 194
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 193
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V S + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGL + + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 8/213 (3%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ L D+ LY ++ G + + S + + +A L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLH-- 149
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
+ IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 150 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 202
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VGRG + EV++ Q G + AVK++ R E + E+ + P ++ L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYGA 118
Query: 133 CVDNGLYLIF-QFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RGLHYLHKGCQRRII 190
+ IF + GS+ L + G + R +G A GL YLH RRI+
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHT---RRIL 172
Query: 191 HRDIKSSNILLTAD-FEPQISDFGLAKWLPSQWTHHSIAP---IEGTFGHLAPEYFMHGI 246
H D+K+ N+LL++D + DFG A L S+ I GT H+APE M
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 247 VDEKTDVFAFGVFLLEIISGRKP 269
D K D+++ +L +++G P
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 199
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 141
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 142 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 194
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 155
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 156 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 208
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGVL--QDGE--EIAVKRLTKVVTDDRKEKEFLT 113
E++ I F+ ++G+G + V + L +DG ++AVK L + +EFL
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 114 EIGTIGHVCHPNVLSLLGCCVDNGL-------YLIFQFSSRGSVASLFHDV----NSPGV 162
E + HP+V L+G + + +I F G + + N +
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 163 EWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW 222
+ + V A G+ YL R IHRD+ + N +L D ++DFGL++ + S
Sbjct: 135 PLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
+ + LA E + +DV+AFGV + EI++ G+ P G
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 142
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 143 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 195
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 150 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 202
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 217
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+ ++ + + EI + + HPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 175
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D+++ G E+++ R G +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+ ++ + + EI + + HPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+F + F D ++ G+ + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 174
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
+ D+++ G E+++ R G +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 150
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 151 --DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 203
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+ + F D ++ G+ + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 123
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL 178
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 52/250 (20%)
Query: 55 CFSFEEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKE 108
F +E +A + +G+G + VY KGV++D E +A+K + + + R+
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RER 63
Query: 109 KEFLTEIGTIGHV-CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSP 160
EFL E + CH +V+ LLG V G +I + +RG + S + N+P
Sbjct: 64 IEFLNEASVMKEFNCH-HVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 161 GVEWKVRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK- 216
+ K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 217 -------------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEI 263
LP +W ++PE G+ +DV++FGV L EI
Sbjct: 179 IYETDYYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEI 224
Query: 264 IS-GRKPVDG 272
+ +P G
Sbjct: 225 ATLAEQPYQG 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VGRG + EV++ Q G + AVK++ R E + E+ + P ++ L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYGA 134
Query: 133 CVDNGLYLIF-QFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RGLHYLHKGCQRRII 190
+ IF + GS+ L + G + R +G A GL YLH RRI+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHT---RRIL 188
Query: 191 HRDIKSSNILLTAD-FEPQISDFGLAKWLPSQWTHHSIAP---IEGTFGHLAPEYFMHGI 246
H D+K+ N+LL++D + DFG A L S+ I GT H+APE M
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 247 VDEKTDVFAFGVFLLEIISGRKP 269
D K D+++ +L +++G P
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 167
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 168 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 220
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 50/245 (20%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 76
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNGLYL-IFQFSSRGSVASLFHDV-----NSPGVEWK 165
E + CH +V+ LLG L I + +RG + S + N+P +
Sbjct: 77 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 166 VRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK------ 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 217 --------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GR 267
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 193 YYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 268 KPVDG 272
+P G
Sbjct: 239 QPYQG 243
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + L YLH K
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 129
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 130 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 219
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 163
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 164 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 216
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEK---EFLTEIGTIGHVCHPNVLSL 129
+G+G + EV+K + G+++A+K KV+ ++ KE L EI + + H NV++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 130 LGCC---------VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHY 180
+ C +YL+F F +A L +V +++ ++ GL+Y
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK-RVMQMLLNGLYY 140
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
+H+ +I+HRD+K++N+L+T D +++DFGLA+
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + + V+ K ++ + G+ YL + +
Sbjct: 95 GICEAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLE---ESNFV 149
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + ++ A G + APE +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFS 208
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQS 276
K+DV++FGV + E S G+KP G S
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + + V+ K ++ + G+ YL + +
Sbjct: 95 GICEAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLE---ESNFV 149
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + ++ A G + APE +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFS 208
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQS 276
K+DV++FGV + E S G+KP G S
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTK--VVTDDRKEKEFLTEIGTIGH 120
+ F ++GRG YA+V L+ + I ++ K +V DD TE
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 121 VC-HPNVLSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGL 178
HP ++ L C ++ L+ + ++ + G + +FH + + + + L
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLAL 123
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--WLPSQWTHHSIAPIEGTFGH 236
+YLH +R II+RD+K N+LL ++ +++D+G+ K P T + GT +
Sbjct: 124 NYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----SXFCGTPNY 176
Query: 237 LAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVD 271
+APE D +A GV + E+++GR P D
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 50/245 (20%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 76
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNGLYL-IFQFSSRGSVASLFHDV-----NSPGVEWK 165
E + CH +V+ LLG L I + +RG + S + N+P +
Sbjct: 77 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 166 VRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK------ 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 217 --------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GR 267
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 193 YYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 268 KPVDG 272
+P G
Sbjct: 239 QPYQG 243
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 126
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 127 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 67/239 (28%)
Query: 72 NLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
+L GR GY V AVK L + + + ++ L+E + V HP+V+ L G
Sbjct: 46 HLKGRAGYTTV-----------AVKMLKENASPS-ELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 132 CCVDNG-LYLIFQFSSRGSVASLFHDVNSPG--------------VEWKVRHKIAVG--- 173
C +G L LI +++ GS+ + G ++ + +G
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 174 -----TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK------------ 216
++G+ YL + +++HRD+ + NIL+ + +ISDFGL++
Sbjct: 154 SFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 217 --WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
+P +W IE F H I ++DV++FGV L EI++ G P G
Sbjct: 211 QGRIPVKWM-----AIESLFDH---------IYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +G G Y VYK + GE +A+K++ + + EI + + HPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 127 LSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTARGLHYLHKG 184
+ LL +N LYL+F+ + F D ++ G+ + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQD--LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKW--LPSQWTHHSIAPIEGTFGHLAPEYF 242
R++HRD+K N+L+ + +++DFGLA+ +P + H + T + APE
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLWYRAPEIL 174
Query: 243 MH-GIVDEKTDVFAFGVFLLEIISGR 267
+ D+++ G E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + L YLH K
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 128
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 129 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 218
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEFLT-EIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFS 145
+G A+K L K + K+ E E + V HP ++ + G D +++I +
Sbjct: 29 HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYI 88
Query: 146 SRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADF 205
G + SL S V A L YLH + II+RD+K NILL +
Sbjct: 89 EGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNG 143
Query: 206 EPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS 265
+I+DFG AK++P + GT ++APE ++ D ++FG+ + E+++
Sbjct: 144 HIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198
Query: 266 GRKPVDGSHQSLHSWAKPILN 286
G P S+ ++ ++ K ILN
Sbjct: 199 GYTPFYDSN-TMKTYEK-ILN 217
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 127
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 128 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 217
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 52/246 (21%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 69
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEW 164
E + CH +V+ LLG V G +I + +RG + S + N+P +
Sbjct: 70 NEASVMKEFNCH-HVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 165 KVRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK----- 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 217 ---------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-G 266
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 185 DYYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLA 230
Query: 267 RKPVDG 272
+P G
Sbjct: 231 EQPYQG 236
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 52/246 (21%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 70
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEW 164
E + CH +V+ LLG V G +I + +RG + S + N+P +
Sbjct: 71 NEASVMKEFNCH-HVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 165 KVRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK----- 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 217 ---------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-G 266
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 186 DXXRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLA 231
Query: 267 RKPVDG 272
+P G
Sbjct: 232 EQPYQG 237
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 52/246 (21%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 61
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEW 164
E + CH +V+ LLG V G +I + +RG + S + N+P +
Sbjct: 62 NEASVMKEFNCH-HVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 119
Query: 165 KVRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK----- 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 217 ---------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-G 266
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 177 DXXRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLA 222
Query: 267 RKPVDG 272
+P G
Sbjct: 223 EQPYQG 228
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEK---EFLTEIGTIGHVCHPNVLSL 129
+G+G + EV+K + G+++A+K KV+ ++ KE L EI + + H NV++L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 130 LGCC---------VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHY 180
+ C +YL+F F +A L +V +++ ++ GL+Y
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK-RVMQMLLNGLYY 139
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
+H+ +I+HRD+K++N+L+T D +++DFGLA+
Sbjct: 140 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 37/275 (13%)
Query: 85 GVLQDGE---------EIAVKRLT-KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
GV++ GE +AVK L V++ +F+ E+ + + H N++ L G +
Sbjct: 26 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL 85
Query: 135 DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDI 194
+ ++ + + GS+ + + + AV A G+ YL +R IHRD+
Sbjct: 86 TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL-SRYAVQVAEGMGYLES---KRFIHRDL 141
Query: 195 KSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT-FGHLAPEYFMHGIVDEKTDV 253
+ N+LL +I DFGL + LP H+ + F APE +D
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 254 FAFGVFLLEIIS-GRKP---VDGSHQSLHSWAKPILNQGEIEKLVDPR--LQGAYDVTQL 307
+ FGV L E+ + G++P ++GS Q LH K E E+L P Q Y+V
Sbjct: 202 WMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK------EGERLPRPEDCPQDIYNVM-- 252
Query: 308 NRLAFAASLCIRASPTWRPTMSEVLEVMLEGDQID 342
C P RPT + + +LE D
Sbjct: 253 -------VQCWAHKPEDRPTFVALRDFLLEAQPTD 280
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 150
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE ++
Sbjct: 151 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 203
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 50/245 (20%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 63
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNGLYL-IFQFSSRGSVASLFHDV-----NSPGVEWK 165
E + CH +V+ LLG L I + +RG + S + N+P +
Sbjct: 64 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 166 VRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK------ 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 217 --------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GR 267
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 180 YYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
Query: 268 KPVDG 272
+P G
Sbjct: 226 QPYQG 230
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 52/246 (21%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 70
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEW 164
E + CH +V+ LLG V G +I + +RG + S + N+P +
Sbjct: 71 NEASVMKEFNCH-HVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 165 KVRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK----- 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 217 ---------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-G 266
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 186 DYYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLA 231
Query: 267 RKPVDG 272
+P G
Sbjct: 232 EQPYQG 237
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 8/213 (3%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ L D+ LY ++ G + + S + + +A L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHG- 150
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
+ IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 52/246 (21%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 66
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEW 164
E + CH +V+ LLG V G +I + +RG + S + N+P +
Sbjct: 67 NEASVMKEFNCH-HVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 165 KVRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK----- 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 217 ---------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-G 266
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 182 DYYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLA 227
Query: 267 RKPVDG 272
+P G
Sbjct: 228 EQPYQG 233
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + + V+ K ++ + G+ YL + +
Sbjct: 93 GICEAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLE---ESNFV 147
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + ++ A G + APE +
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFS 206
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV++FGV + E S G+KP G
Sbjct: 207 SKSDVWSFGVLMWEAFSYGQKPYRG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 149
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 150 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + + V+ K ++ + G+ YL + +
Sbjct: 75 GICEAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLE---ESNFV 129
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + ++ A G + APE +
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFS 188
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQS 276
K+DV++FGV + E S G+KP G S
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKPYRGMKGS 217
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + + V+ K ++ + G+ YL + +
Sbjct: 79 GICEAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLE---ESNFV 133
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + ++ A G + APE +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFS 192
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQS 276
K+DV++FGV + E S G+KP G S
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + + V+ K ++ + G+ YL + +
Sbjct: 85 GICEAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLE---ESNFV 139
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + ++ A G + APE +
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFS 198
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQS 276
K+DV++FGV + E S G+KP G S
Sbjct: 199 SKSDVWSFGVLMWEAFSYGQKPYRGMKGS 227
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ T + T + APE ++
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRWYRAPEIMLNW 217
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 52/246 (21%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 69
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEW 164
E + CH +V+ LLG V G +I + +RG + S + N+P +
Sbjct: 70 NEASVMKEFNCH-HVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 165 KVRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK----- 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 217 ---------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-G 266
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 185 DYYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLA 230
Query: 267 RKPVDG 272
+P G
Sbjct: 231 EQPYQG 236
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 22/246 (8%)
Query: 38 ENVVVACESETTKPT-WRCFSFEEISIATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAV 95
EN+ + +PT +R + I + + + VG G Y V + G +AV
Sbjct: 16 ENLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 75
Query: 96 KRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-------NGLYLIFQFSSRG 148
K+L++ K E+ + H+ H NV+ LL N +YL+
Sbjct: 76 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-- 133
Query: 149 SVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQ 208
A L + V + + RGL Y+H IIHRD+K SN+ + D E +
Sbjct: 134 --ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 188
Query: 209 ISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI-VDEKTDVFAFGVFLLEIISGR 267
I DFGLA+ T + T + APE ++ + ++ D+++ G + E+++GR
Sbjct: 189 ILDFGLAR-----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
Query: 268 KPVDGS 273
G+
Sbjct: 244 TLFPGT 249
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + + V+ K ++ + G+ YL + +
Sbjct: 73 GICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLE---ESNFV 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + ++ A G + APE +
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFS 186
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQS 276
K+DV++FGV + E S G+KP G S
Sbjct: 187 SKSDVWSFGVLMWEAFSYGQKPYRGMKGS 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 8/213 (3%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ L D+ LY ++ G + + S + L YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHG- 151
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
+ IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 152 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 74 VGRGGYAEVYKGVL-QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V V + G ++A+K+L + + K E+ + H+ H NV+ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 133 CVDN-------GLYLIFQFSSRGSVASLFHD-VNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ YL+ F + H+ + +++ V + +GL Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML-----KGLRYIHAA 147
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
IIHRD+K N+ + D E +I DFGLA+ S+ + T + APE ++
Sbjct: 148 G---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV-----TRWYRAPEVILN 199
Query: 245 GIVDEKT-DVFAFGVFLLEIISGRKPVDGS 273
+ +T D+++ G + E+I+G+ GS
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 37/275 (13%)
Query: 85 GVLQDGE---------EIAVKRLTK-VVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
GV++ GE +AVK L V++ +F+ E+ + + H N++ L G +
Sbjct: 32 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL 91
Query: 135 DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDI 194
+ ++ + + GS+ + + + AV A G+ YL +R IHRD+
Sbjct: 92 TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL-SRYAVQVAEGMGYLES---KRFIHRDL 147
Query: 195 KSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT-FGHLAPEYFMHGIVDEKTDV 253
+ N+LL +I DFGL + LP H+ + F APE +D
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 254 FAFGVFLLEIIS-GRKP---VDGSHQSLHSWAKPILNQGEIEKLVDPR--LQGAYDVTQL 307
+ FGV L E+ + G++P ++GS Q LH K E E+L P Q Y+V
Sbjct: 208 WMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK------EGERLPRPEDCPQDIYNVM-- 258
Query: 308 NRLAFAASLCIRASPTWRPTMSEVLEVMLEGDQID 342
C P RPT + + +LE D
Sbjct: 259 -------VQCWAHKPEDRPTFVALRDFLLEAQPTD 286
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 74 VGRGGYAEV---YKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
VG G Y V Y L+ +++AVK+L++ + E+ + H+ H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 131 GCCVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK 183
+ +YL+ A L + V S + + + RGL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMG----ADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV-----ATRWYRAPEIML 201
Query: 244 HGI-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ + ++ D+++ G + E++ G+ GS
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I D+GLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 8/213 (3%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ L D+ LY ++ G + + S + L YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHG- 151
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
+ IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 152 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 149
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 150 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEK---EFLTEIGTIGHVCHPNVLSL 129
+G+G + EV+K + G+++A+K KV+ ++ KE L EI + + H NV++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 130 LGCC---------VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHY 180
+ C +YL+F F +A L +V +++ ++ GL+Y
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK-RVMQMLLNGLYY 140
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
+H+ +I+HRD+K++N+L+T D +++DFGLA+
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 24/187 (12%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG---LYLIFQFSS 146
G +AVK+L D ++++F EI + + ++ G G L L+ ++
Sbjct: 39 GALVAVKQLQHSGPD--QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 96
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ-------RRIIHRDIKSSNI 199
G + RH+ + +R L Y + C+ RR +HRD+ + NI
Sbjct: 97 SGCLRDFLQ-----------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 145
Query: 200 LLTADFEPQISDFGLAKWLPSQWTHHSI-APIEGTFGHLAPEYFMHGIVDEKTDVFAFGV 258
L+ ++ +I+DFGLAK LP ++ + P + APE I ++DV++FGV
Sbjct: 146 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGV 205
Query: 259 FLLEIIS 265
L E+ +
Sbjct: 206 VLYELFT 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 8/213 (3%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ L D+ LY ++ G + + S + + +A L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHG- 150
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
+ IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 8/213 (3%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ L D+ LY ++ G + + S + L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHG- 150
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
+ IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 149
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 150 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 133
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 134 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DFGLA+ T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 8/213 (3%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
+ L D+ LY ++ G + + S + L YLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHG- 153
Query: 185 CQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
+ IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 154 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 244
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 148
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 149 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAE-VYKGVLQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 149
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 150 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 73 LVGRGGYAEVYKGV-LQDGEEIAVKRL-TKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
++G GG +EV+ L+ ++AVK L + D F E + HP ++++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 131 GCCVDNG---------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYL 181
D G Y++ ++ ++ + H P + IA + L++
Sbjct: 79 ----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIA-DACQALNFS 132
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPE 240
H Q IIHRD+K +NI+++A ++ DFG+A+ + S + A + GT +L+PE
Sbjct: 133 H---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
VD ++DV++ G L E+++G P G
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 24/187 (12%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG---LYLIFQFSS 146
G +AVK+L D ++++F EI + + ++ G G L L+ ++
Sbjct: 52 GALVAVKQLQHSGPD--QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 109
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ-------RRIIHRDIKSSNI 199
G + RH+ + +R L Y + C+ RR +HRD+ + NI
Sbjct: 110 SGCLRDFLQ-----------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 158
Query: 200 LLTADFEPQISDFGLAKWLPSQWTHHSI-APIEGTFGHLAPEYFMHGIVDEKTDVFAFGV 258
L+ ++ +I+DFGLAK LP ++ + P + APE I ++DV++FGV
Sbjct: 159 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGV 218
Query: 259 FLLEIIS 265
L E+ +
Sbjct: 219 VLYELFT 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVYK----GVLQDGEEIAVKRLTK--VVTDDRKEKEFLTEI 115
I F ++G+GGY +V++ G+ A+K L K +V + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 116 GTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG- 173
+ V HP ++ L+ G LYLI ++ S G LF + G+ + +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE---LFMQLEREGIFMEDTACFYLAE 129
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEG 232
+ L +LH Q+ II+RD+K NI+L +++DFGL K T H+ G
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC---G 183
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
T ++APE M + D ++ G + ++++G P G ++
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEK---EFLTEIGTIGHVCHPNVLSL 129
+G+G + EV+K + G+++A+K KV+ ++ KE L EI + + H NV++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 130 LGCC---------VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHY 180
+ C +YL+F F +A L +V +++ ++ GL+Y
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIK-RVMQMLLNGLYY 140
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
+H+ +I+HRD+K++N+L+T D +++DFGLA+
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+GRG + EV++ Q G + AVK++ R E + E+ + P ++ L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGLSSPRIVPLYGA 132
Query: 133 CVDNGLYLIF-QFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RGLHYLHKGCQRRII 190
+ IF + GS+ L + G + R +G A GL YLH RRI+
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHT---RRIL 186
Query: 191 HRDIKSSNILLTAD-FEPQISDFGLAKWLPSQWTHHSIAP---IEGTFGHLAPEYFMHGI 246
H D+K+ N+LL++D + DFG A L S+ I GT H+APE M
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 247 VDEKTDVFAFGVFLLEIISGRKP 269
D K D+++ +L +++G P
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 74 VGRGGYAEVYKGVLQDGE-EIAVKRLTKV------VTDDRKE-----KEFLTEIGTIGHV 121
+G G Y EV ++G E A+K + K +DD K +E EI + +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 122 CHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK--------IAV 172
HPN++ L D YL+ +F G LF + + RHK I
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGE---LFEQIIN-------RHKFDECDAANIMK 153
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILL---TADFEPQISDFGLAKWLPSQWTHHSIAP 229
G+ YLHK I+HRDIK NILL + +I DFGL+ + + +
Sbjct: 154 QILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY---KLRD 207
Query: 230 IEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSH 274
GT ++APE + +EK DV++ GV + ++ G P G +
Sbjct: 208 RLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 37/275 (13%)
Query: 85 GVLQDGE---------EIAVKRLT-KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
GV++ GE +AVK L V++ +F+ E+ + + H N++ L G +
Sbjct: 22 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL 81
Query: 135 DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDI 194
+ ++ + + GS+ + + + AV A G+ YL +R IHRD+
Sbjct: 82 TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL-SRYAVQVAEGMGYLE---SKRFIHRDL 137
Query: 195 KSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT-FGHLAPEYFMHGIVDEKTDV 253
+ N+LL +I DFGL + LP H+ + F APE +D
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 254 FAFGVFLLEIIS-GRKP---VDGSHQSLHSWAKPILNQGEIEKLVDPR--LQGAYDVTQL 307
+ FGV L E+ + G++P ++GS Q LH K E E+L P Q Y+V
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK------EGERLPRPEDCPQDIYNVM-- 248
Query: 308 NRLAFAASLCIRASPTWRPTMSEVLEVMLEGDQID 342
C P RPT + + +LE D
Sbjct: 249 -------VQCWAHKPEDRPTFVALRDFLLEAQPTD 276
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 148
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 149 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 68 FSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPN 125
F ++G G ++ V L E A+K L K + + K E + + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH-K 183
+ L D+ LY ++ G + + S + + +A L YLH K
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA--LEYLHGK 151
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
G IIHRD+K NILL D QI+DFG AK L + GT +++PE
Sbjct: 152 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ +D++A G + ++++G P ++ L
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 24/187 (12%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG---LYLIFQFSS 146
G +AVK+L D ++++F EI + + ++ G G L L+ ++
Sbjct: 40 GALVAVKQLQHSGPD--QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 97
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ-------RRIIHRDIKSSNI 199
G + RH+ + +R L Y + C+ RR +HRD+ + NI
Sbjct: 98 SGCLRDFLQ-----------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 146
Query: 200 LLTADFEPQISDFGLAKWLPSQWTHHSI-APIEGTFGHLAPEYFMHGIVDEKTDVFAFGV 258
L+ ++ +I+DFGLAK LP ++ + P + APE I ++DV++FGV
Sbjct: 147 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGV 206
Query: 259 FLLEIIS 265
L E+ +
Sbjct: 207 VLYELFT 213
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 52/246 (21%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 98
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEW 164
E + CH +V+ LLG V G +I + +RG + S + N+P +
Sbjct: 99 NEASVMKEFNCH-HVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 165 KVRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK----- 216
K+ A A G+ YL+ + +HRD+ + N ++ DF +I DFG+ +
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 217 ---------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-G 266
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 214 DYYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLA 259
Query: 267 RKPVDG 272
+P G
Sbjct: 260 EQPYQG 265
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGT 117
EE+ AT+ +GRG + EV++ Q G + AVK KV + + +E + G
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVK---KVRLEVFRAEELMACAG- 141
Query: 118 IGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-R 176
+ P ++ L G + IF G SL V G + R +G A
Sbjct: 142 ---LTSPRIVPLYGAVREGPWVNIFMELLEG--GSLGQLVKEQGCLPEDRALYYLGQALE 196
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTAD-FEPQISDFGLAKWLPSQWTHHSIAP---IEG 232
GL YLH RRI+H D+K+ N+LL++D + DFG A L S+ I G
Sbjct: 197 GLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
T H+APE + D K DV++ +L +++G P
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 73 LVGRGGYAEVYKGV-LQDGEEIAVKRL-TKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
++G GG +EV+ L+ ++AVK L + D F E + HP ++++
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 131 GCCVDNG---------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYL 181
D G Y++ ++ ++ + H P + IA + L++
Sbjct: 96 ----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIA-DACQALNFS 149
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPE 240
H Q IIHRD+K +NI+++A ++ DFG+A+ + S + A + GT +L+PE
Sbjct: 150 H---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
VD ++DV++ G L E+++G P G
Sbjct: 207 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 21/245 (8%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC-CVDNGLYLIFQFSSRG 148
G ++AVK + + R+E F E+ + H NV+ + V L+++ +F G
Sbjct: 70 GRQVAVK-MMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG 127
Query: 149 SVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQ 208
++ + V + + + + L YLH + +IHRDIKS +ILLT D +
Sbjct: 128 ALTDIVSQVR---LNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVK 181
Query: 209 ISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRK 268
+SDFG + + GT +APE + + D+++ G+ ++E++ G
Sbjct: 182 LSDFGFCAQISKDVPKRKX--LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239
Query: 269 PVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTM 328
P + P+ + P+L+ ++ V+ + R F + +R P R T
Sbjct: 240 P--------YFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLR-DFLERMLVR-DPQERATA 289
Query: 329 SEVLE 333
E+L+
Sbjct: 290 QELLD 294
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 85 GVLQDGE---------EIAVKRLTK-VVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
GV++ GE +AVK L V++ +F+ E+ + + H N++ L G +
Sbjct: 32 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL 91
Query: 135 DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDI 194
+ ++ + + GS+ + + + AV A G+ YL +R IHRD+
Sbjct: 92 TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL-SRYAVQVAEGMGYLES---KRFIHRDL 147
Query: 195 KSSNILLTADFEPQISDFGLAKWLPSQWTH-----HSIAPIEGTFGHLAPEYFMHGIVDE 249
+ N+LL +I DFGL + LP H H P F APE
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP----FAWCAPESLKTRTFSH 203
Query: 250 KTDVFAFGVFLLEIIS-GRKP---VDGSHQSLHSWAKPILNQGEIEKLVDPR--LQGAYD 303
+D + FGV L E+ + G++P ++GS Q LH K E E+L P Q Y+
Sbjct: 204 ASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK------EGERLPRPEDCPQDIYN 256
Query: 304 VTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLEGDQID 342
V C P RPT + + +LE D
Sbjct: 257 VM---------VQCWAHKPEDRPTFVALRDFLLEAQPTD 286
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Query: 73 LVGRGGYAEVYKGV-LQDGEEIAVKRL-TKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
++G GG +EV+ L+ ++AVK L + D F E + HP ++++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 131 GCCVDNGL-----YLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
Y++ ++ ++ + H P + IA + L++ H
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIA-DACQALNFSH--- 133
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPEYFMH 244
Q IIHRD+K +NI+++A ++ DFG+A+ + S + A + GT +L+PE
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDG 272
VD ++DV++ G L E+++G P G
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 67/239 (28%)
Query: 72 NLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
+L GR GY V AVK L + + + ++ L+E + V HP+V+ L G
Sbjct: 46 HLKGRAGYTTV-----------AVKMLKENASPS-ELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 132 CCVDNG-LYLIFQFSSRGSVASLFHDVNSPG--------------VEWKVRHKIAVG--- 173
C +G L LI +++ GS+ + G ++ + +G
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 174 -----TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK------------ 216
++G+ YL + ++HRD+ + NIL+ + +ISDFGL++
Sbjct: 154 SFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 217 --WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
+P +W IE F H I ++DV++FGV L EI++ G P G
Sbjct: 211 QGRIPVKWM-----AIESLFDH---------IYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVYK----GVLQDGEEIAVKRLTK--VVTDDRKEKEFLTEI 115
I F ++G+GGY +V++ G+ A+K L K +V + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 116 GTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG- 173
+ V HP ++ L+ G LYLI ++ S G LF + G+ + +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE---LFMQLEREGIFMEDTACFYLAE 129
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWT-HHSIAPIEG 232
+ L +LH Q+ II+RD+K NI+L +++DFGL K T H G
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC---G 183
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
T ++APE M + D ++ G + ++++G P G ++
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + + V+ K ++ + G+ YL + +
Sbjct: 79 GICEAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLE---ESNFV 133
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + + A G + APE +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK-AQTHGKWPVKWYAPECINYYKFS 192
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDGSHQS 276
K+DV++FGV + E S G+KP G S
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 12/205 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + V+ K ++ + G+ YL + +
Sbjct: 437 GICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLE---ESNFV 491
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + ++ A G + APE +
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFS 550
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV++FGV + E S G+KP G
Sbjct: 551 SKSDVWSFGVLMWEAFSYGQKPYRG 575
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 121/286 (42%), Gaps = 47/286 (16%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F L+G GG+ +V+K + DG+ +KR+ +++ E+E + + + H N+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK--YNNEKAERE----VKALAKLDHVNI 66
Query: 127 LSLLGC-----------------CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
+ GC L++ +F +G++ ++ + +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAP 229
+ +G+ Y+H +++I+RD+K SNI L + +I DFGL L +
Sbjct: 127 LFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---XR 180
Query: 230 IEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGE 289
+GT +++PE ++ D++A G+ L E++ D + ++ + L G
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSKFFTD--LRDGI 235
Query: 290 IEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
I + D + + T L +L + P RP SE+L +
Sbjct: 236 ISDIFDKK-----EKTLLQKL-------LSKKPEDRPNTSEILRTL 269
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 12/205 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKR---LTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + V KG Q + + L D + E L E + + +P ++ ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 131 GCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
G C L+ + + G + V+ K ++ + G+ YL + +
Sbjct: 438 GICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLE---ESNFV 492
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF--GHLAPEYFMHGIVD 248
HRD+ + N+LL +ISDFGL+K L + ++ A G + APE +
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFS 551
Query: 249 EKTDVFAFGVFLLEIIS-GRKPVDG 272
K+DV++FGV + E S G+KP G
Sbjct: 552 SKSDVWSFGVLMWEAFSYGQKPYRG 576
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I DF LA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 52/246 (21%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVY----KGVLQDGEE--IAVKRLTKVVTDDRKEKEFL 112
+E +A + +G+G + VY KGV++D E +A+K + + + R+ EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIEFL 63
Query: 113 TEIGTIGHV-CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVASLFHDV-----NSPGVEW 164
E + CH +V+ LLG V G +I + +RG + S + N+P +
Sbjct: 64 NEASVMKEFNCH-HVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 165 KVRHKI---AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK----- 216
K+ A A G+ YL+ + +HRD+ + N + DF +I DFG+ +
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 217 ---------WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-G 266
LP +W ++PE G+ +DV++FGV L EI +
Sbjct: 179 DYYRKGGKGLLPVRW--------------MSPESLKDGVFTTYSDVWSFGVVLWEIATLA 224
Query: 267 RKPVDG 272
+P G
Sbjct: 225 EQPYQG 230
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 93 IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVA 151
I ++L + + + E+ + P ++ G +G + + + GS+
Sbjct: 43 IMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 102
Query: 152 SLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISD 211
+ + + ++ K+++ RGL YL + + +I+HRD+K SNIL+ + E ++ D
Sbjct: 103 QVLKEAKR--IPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCD 158
Query: 212 FGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
FG++ L + + GT ++APE ++D+++ G+ L+E+ GR P+
Sbjct: 159 FGVSGQLIDSMANSFV----GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 63 IATNAFSSENLVGRGGYAEVYKG-VLQDGEEIAVKRLTK-VVTDDRKEKEFLTEIGTIGH 120
+ + F ++G+G + +V V + G+ AVK L K V+ D + +TE +
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 121 VCHPNVLSLLGCCVD--NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGL 178
+ L+ L CC + L+ + +F + G + +FH S + A L
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLA 238
+LH + II+RD+K N+LL + +++DFG+ K + A GT ++A
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIA 192
Query: 239 PEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
PE + D +A GV L E++ G P + ++
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED 230
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 37/271 (13%)
Query: 85 GVLQDGE---------EIAVKRLT-KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
GV++ GE +AVK L V++ +F+ E+ + + H N++ L G +
Sbjct: 22 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL 81
Query: 135 DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDI 194
+ ++ + + GS+ + + + AV A G+ YL +R IHRD+
Sbjct: 82 TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLE---SKRFIHRDL 137
Query: 195 KSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT-FGHLAPEYFMHGIVDEKTDV 253
+ N+LL +I DFGL + LP H+ + F APE +D
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 254 FAFGVFLLEIIS-GRKP---VDGSHQSLHSWAKPILNQGEIEKLVDPR--LQGAYDVTQL 307
+ FGV L E+ + G++P ++GS Q LH K E E+L P Q Y+V
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK------EGERLPRPEDCPQDIYNVM-- 248
Query: 308 NRLAFAASLCIRASPTWRPTMSEVLEVMLEG 338
C P RPT + + +LE
Sbjct: 249 -------VQCWAHKPEDRPTFVALRDFLLEA 272
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 37/271 (13%)
Query: 85 GVLQDGE---------EIAVKRLT-KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
GV++ GE +AVK L V++ +F+ E+ + + H N++ L G +
Sbjct: 26 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL 85
Query: 135 DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDI 194
+ ++ + + GS+ + + + AV A G+ YL +R IHRD+
Sbjct: 86 TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL-SRYAVQVAEGMGYLES---KRFIHRDL 141
Query: 195 KSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT-FGHLAPEYFMHGIVDEKTDV 253
+ N+LL +I DFGL + LP H+ + F APE +D
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 254 FAFGVFLLEIIS-GRKP---VDGSHQSLHSWAKPILNQGEIEKLVDPR--LQGAYDVTQL 307
+ FGV L E+ + G++P ++GS Q LH K E E+L P Q Y+V
Sbjct: 202 WMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK------EGERLPRPEDCPQDIYNVM-- 252
Query: 308 NRLAFAASLCIRASPTWRPTMSEVLEVMLEG 338
C P RPT + + +LE
Sbjct: 253 -------VQCWAHKPEDRPTFVALRDFLLEA 276
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 74 VGRGGYAEV---YKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
VG G Y V Y L+ +++AVK+L++ + E+ + H+ H NV+ LL
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 131 GCCVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK 183
+ +YL+ A L + V + + + RGL Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMG----ADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE +
Sbjct: 142 AG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV-----ATRWYRAPEIML 193
Query: 244 HGI-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ + ++ D+++ G + E++ G+ GS
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 40/220 (18%)
Query: 73 LVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTE--IGTIGHVCHPNVLSLL 130
L+GRG Y VYKG L D +AVK V + F+ E I + + H N+ +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVK-----VFSFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 131 ----GCCVDNGL--YLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKG 184
D + L+ ++ GS+ S +W ++A RGL YLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTE 130
Query: 185 CQR------RIIHRDIKSSNILLTADFEPQISDFGLAKWL-------PSQWTHHSIAPIE 231
R I HRD+ S N+L+ D ISDFGL+ L P + + +I+ +
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV- 189
Query: 232 GTFGHLAPEYFMHGIVD--------EKTDVFAFGVFLLEI 263
GT ++APE + G V+ ++ D++A G+ EI
Sbjct: 190 GTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 66 NAFSSENLVGRGGYAEVYKGVLQDGE---EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
N ++ +G G + V +GV + + ++A+K L K T+ +E + E + +
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLD 68
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLF----HDVNSPGVEWKVRHKIAVGTARGL 178
+P ++ L+G C L L+ + + G + ++ V ++ H++++G +
Sbjct: 69 NPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMG----M 123
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI-EGTFGHL 237
YL ++ +HRD+ + N+LL +ISDFGL+K L + ++++ +
Sbjct: 124 KYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
APE ++DV+++GV + E +S G+KP
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I FGLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG---LYLIFQFSS 146
G +AVK+L D ++++F EI + + ++ G G L L+ ++
Sbjct: 36 GALVAVKQLQHSGPD--QQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLP 93
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ-------RRIIHRDIKSSNI 199
G + RH+ + +R L Y + C+ RR +HRD+ + NI
Sbjct: 94 SGCLRDFLQ-----------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 142
Query: 200 LLTADFEPQISDFGLAKWLPSQWTHHSI-APIEGTFGHLAPEYFMHGIVDEKTDVFAFGV 258
L+ ++ +I+DFGLAK LP + P + APE I ++DV++FGV
Sbjct: 143 LVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGV 202
Query: 259 FLLEIIS 265
L E+ +
Sbjct: 203 VLYELFT 209
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 74 VGRGGYAEV---YKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
VG G Y V Y L+ +++AVK+L++ + E+ + H+ H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 131 GCCVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK 183
+ +YL+ A L + V + + + RGL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMG----ADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
IIHRD+K SN+ + D E +I DFGLA+ + T + T + APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV-----ATRWYRAPEIML 201
Query: 244 HGI-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ + ++ D+++ G + E++ G+ GS
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGT 117
EE+ AT+ +GRG + EV++ Q G + AVK KV + + +E + G
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVK---KVRLEVFRAEELMACAG- 122
Query: 118 IGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-R 176
+ P ++ L G + IF G SL V G + R +G A
Sbjct: 123 ---LTSPRIVPLYGAVREGPWVNIFMELLEG--GSLGQLVKEQGCLPEDRALYYLGQALE 177
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTAD-FEPQISDFGLAKWLPSQWTHHSIAP---IEG 232
GL YLH RRI+H D+K+ N+LL++D + DFG A L + I G
Sbjct: 178 GLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
T H+APE + D K DV++ +L +++G P
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I D GLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 24/268 (8%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIG-TIGHVCHPNVLSLLG 131
+GRG Y V K + G+ AVKR+ V + +++K L ++ + V P ++ G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATV-NSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 132 CCVDNGLYLIFQFSSRGSVASLFHDVNSPG--VEWKVRHKIAVGTARGLHYLHKGCQRRI 189
G I S+ + V G + + KIAV + L +LH + +
Sbjct: 101 ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLSV 158
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
IHRD+K SN+L+ A + + DFG++ +L A G + APE + +
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKPYXAPERINPELNQK 215
Query: 250 ----KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVT 305
K+D+++ G+ +E+ R P D SW P ++ + P+L D
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYD-------SWGTPFQQLKQVVEEPSPQLPA--DKF 266
Query: 306 QLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ F S C++ + RPT E+ +
Sbjct: 267 SAEFVDF-TSQCLKKNSKERPTYPELXQ 293
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDN-------GLYLIF 142
G +AVK+L++ + K E+ + V H N++SLL +YL+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 143 QFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLT 202
+ + +++ + + + + G+ +LH IIHRD+K SNI++
Sbjct: 107 ELMDANLCQVIHMELDHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVK 158
Query: 203 ADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLE 262
+D +I DFGLA+ + T+ + P T + APE + E D+++ G + E
Sbjct: 159 SDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
Query: 263 IISGRKPVDGSHQSLHSWAKPILNQG 288
++ G G+ + W K I G
Sbjct: 216 LVKGSVIFQGTDH-IDQWNKVIEQLG 240
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I D GLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 109 KEFLTEIGTIGHVCHPNVLSLLGCCVD---NGLYLIFQFSSRGSVASLFHDVNSPGVEWK 165
++ EI + + HPNV+ L+ D + LY++F+ ++G V + P E +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSEDQ 138
Query: 166 VRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHH 225
R +G+ YLH ++IIHRDIK SN+L+ D +I+DFG++ + +
Sbjct: 139 ARFYFQ-DLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--KGSDA 192
Query: 226 SIAPIEGTFGHLAPEYF--MHGIVDEKT-DVFAFGVFLLEIISGRKP-VDGSHQSLHSWA 281
++ GT +APE I K DV+A GV L + G+ P +D LHS
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI 252
Query: 282 K 282
K
Sbjct: 253 K 253
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 45/275 (16%)
Query: 85 GVLQDGE---------EIAVKRLTK-VVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
GV++ GE +AVK L V++ +F+ E+ + + H N++ L G +
Sbjct: 22 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL 81
Query: 135 DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDI 194
+ ++ + + GS+ + + + AV A G+ YL +R IHRD+
Sbjct: 82 TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL-SRYAVQVAEGMGYLE---SKRFIHRDL 137
Query: 195 KSSNILLTADFEPQISDFGLAKWLPSQWTH-----HSIAPIEGTFGHLAPEYFMHGIVDE 249
+ N+LL +I DFGL + LP H H P F APE
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP----FAWCAPESLKTRTFSH 193
Query: 250 KTDVFAFGVFLLEIIS-GRKP---VDGSHQSLHSWAKPILNQGEIEKLVDPR--LQGAYD 303
+D + FGV L E+ + G++P ++GS Q LH K E E+L P Q Y+
Sbjct: 194 ASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK------EGERLPRPEDCPQDIYN 246
Query: 304 VTQLNRLAFAASLCIRASPTWRPTMSEVLEVMLEG 338
V C P RPT + + +LE
Sbjct: 247 VM---------VQCWAHKPEDRPTFVALRDFLLEA 272
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 13/222 (5%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTK--VVTDDRKEKEFLTEIG 116
+I + F ++G+G + +V+ + + A+K L K V+ DD E + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 117 TIGHVCHPNVLSLLGCCVDN--GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGT 174
HP L+ + C L+ + ++ + G + ++H + + A
Sbjct: 72 LSLAWEHP-FLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEI 128
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
GL +LH + I++RD+K NILL D +I+DFG+ K + GT
Sbjct: 129 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTP 183
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
++APE + + D ++FGV L E++ G+ P G +
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
VG G Y V + G +AVK+L++ K E+ + H+ H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 133 CVD-------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
N +YL+ A L + V + + RGL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
IIHRD+K SN+ + D E +I D GLA+ + T + T + APE ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV-----ATRWYRAPEIMLNW 197
Query: 246 I-VDEKTDVFAFGVFLLEIISGRKPVDGS 273
+ ++ D+++ G + E+++GR G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y K + DG+ + K L + +++ ++E+ + + HPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 133 CVD---NGLYLIFQFSSRGSVASLFHDVNSPGVEWK--VRHKIAVGTARGLHYLHKGCQR 187
+D LY++ ++ G +AS V + G + + + + + L K C R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLAS----VITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 188 R------IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
R ++HRD+K +N+ L ++ DFGLA+ L + T + A + GT +++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKAFV-GTPYYMSPEQ 187
Query: 242 FMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
+EK+D+++ G L E+ + P Q
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 42/296 (14%)
Query: 66 NAFSSENLVGRGGYAEV-----YKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
N S +G G + +V Y + D ++ K + + ++E+ + +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 121 V-CHPNVLSLLGCCVDNGLYLIF-QFSSRGSVASLFH--------DVNSPGV-------- 162
+ H N+++LLG C G L+ ++ G + + SP +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 163 EWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW 222
+ + + A+G+ +L + IHRD+ + NILLT +I DFGLA+ + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+ +APE + + ++DV+++G+FL E+ S G P G + S
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG--MPVDSKF 280
Query: 282 KPILNQGEIEKLVDPRLQGA--YDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
++ +G +++ P A YD+ + C A P RPT ++++++
Sbjct: 281 YKMIKEG--FRMLSPEHAPAEMYDIMK---------TCWDADPLKRPTFKQIVQLI 325
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTI----GHVCHPNVLS 128
+G+G Y V+K + + GE +AVK++ + + EI + GH N+L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 129 LLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRR 188
+L D +YL+F + A + ++ P + V +++ + + YLH G
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLI----KVIKYLHSGG--- 129
Query: 189 IIHRDIKSSNILLTADFEPQISDFGLAK 216
++HRD+K SNILL A+ +++DFGL++
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLT---KVVTDDRKEKEFLTEIGTIGHVCH 123
+ + +G G +A VYK ++ +I A+K++ + D + L EI + + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 124 PNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLH 182
PN++ LL + + L+F F + + D NS + + T +GL YLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL--PSQWTHHSIAPIEGTFGHLAPE 240
Q I+HRD+K +N+LL + +++DFGLAK P++ H + T + APE
Sbjct: 130 ---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV----TRWYRAPE 182
Query: 241 YF----MHGIVDEKTDVFAFGVFLLEII 264
M+G+ D++A G L E++
Sbjct: 183 LLFGARMYGV---GVDMWAVGCILAELL 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V G + ++A+K + + E EF+ E + ++ H ++ L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+++I ++ + G + + ++ + + ++ + YL ++ +HR
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 128
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHH--SIAPIEGTFGHLAPEYFMHGIVDE 249
D+ + N L+ ++SDFGL+++ L ++T S P+ + PE M+
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEVLMYSKFSS 184
Query: 250 KTDVFAFGVFLLEIIS-GRKPVD 271
K+D++AFGV + EI S G+ P +
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 42/296 (14%)
Query: 66 NAFSSENLVGRGGYAEV-----YKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
N S +G G + +V Y + D ++ K + + ++E+ + +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 121 V-CHPNVLSLLGCCVDNGLYLIF-QFSSRGSVASLFH--------DVNSPGV-------- 162
+ H N+++LLG C G L+ ++ G + + SP +
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 163 EWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW 222
+ + + A+G+ +L + IHRD+ + NILLT +I DFGLA+ + +
Sbjct: 143 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+ +APE + + ++DV+++G+FL E+ S G P G + S
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG--MPVDSKF 257
Query: 282 KPILNQGEIEKLVDPRLQGA--YDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
++ +G +++ P A YD+ + C A P RPT ++++++
Sbjct: 258 YKMIKEG--FRMLSPEHAPAEMYDIMK---------TCWDADPLKRPTFKQIVQLI 302
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 27/252 (10%)
Query: 86 VLQDGEEIAVKRLTKVVTDDRKEKE---FLTEIGTIGHVCHPNVLSLLGC-CVDNGLYLI 141
V G+ +AVK++ D RK++ E+ + H NV+ + V + L+++
Sbjct: 41 VRSSGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 95
Query: 142 FQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILL 201
+F G++ + V + + + + + L LH + +IHRDIKS +ILL
Sbjct: 96 MEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILL 149
Query: 202 TADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
T D ++SDFG + + + GT +APE + D+++ G+ ++
Sbjct: 150 THDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 207
Query: 262 EIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRAS 321
E++ G P + P+ I + PRL+ + V+ + F L +R
Sbjct: 208 EMVDGEPP--------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLK-GFLDRLLVR-D 257
Query: 322 PTWRPTMSEVLE 333
P R T +E+L+
Sbjct: 258 PAQRATAAELLK 269
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 42/296 (14%)
Query: 66 NAFSSENLVGRGGYAEV-----YKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
N S +G G + +V Y + D ++ K + + ++E+ + +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 121 V-CHPNVLSLLGCCVDNGLYLIF-QFSSRGSVASLFH--------DVNSPGV-------- 162
+ H N+++LLG C G L+ ++ G + + SP +
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 163 EWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW 222
+ + + A+G+ +L + IHRD+ + NILLT +I DFGLA+ + +
Sbjct: 159 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+ +APE + + ++DV+++G+FL E+ S G P G + S
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG--MPVDSKF 273
Query: 282 KPILNQGEIEKLVDPRLQGA--YDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
++ +G +++ P A YD+ + C A P RPT ++++++
Sbjct: 274 YKMIKEG--FRMLSPEHAPAEMYDIMK---------TCWDADPLKRPTFKQIVQLI 318
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V G + ++A+K + + E EF+ E + ++ H ++ L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 134 VDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+++I ++ + G + + ++ + + ++ + YL ++ +HR
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHH--SIAPIEGTFGHLAPEYFMHGIVDE 249
D+ + N L+ ++SDFGL+++ L ++T S P+ + PE M+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEVLMYSKFSS 200
Query: 250 KTDVFAFGVFLLEIIS-GRKPVD 271
K+D++AFGV + EI S G+ P +
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIG----HVC 122
+ ++++GRG + V + V + G E AVK + VT +R E L E+ H+
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIME--VTAERLSPEQLEEVREATRRETHIL 153
Query: 123 -----HPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR 176
HP++++L+ + ++L+F +G + + K I
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLE 211
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-PSQWTHHSIAPIEGTFG 235
+ +LH I+HRD+K NILL + + ++SDFG + L P + + + GT G
Sbjct: 212 AVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPG 264
Query: 236 HLAPEYF------MHGIVDEKTDVFAFGVFLLEIISGRKP 269
+LAPE H ++ D++A GV L +++G P
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G V+K + + ++L + + + E+ + P ++ G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+G + + + GS+ + + ++ K+++ +GL YL + + +I+HR
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLRE--KHKIMHR 191
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTD 252
D+K SNIL+ + E ++ DFG++ L + + GT +++PE ++D
Sbjct: 192 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSD 247
Query: 253 VFAFGVFLLEIISGRKPV 270
+++ G+ L+E+ GR P+
Sbjct: 248 IWSMGLSLVEMAVGRYPI 265
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V G + ++A+K + + E EF+ E + ++ H ++ L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 134 VDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+++I ++ + G + + ++ + + ++ + YL ++ +HR
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA---PIEGTFGHLAPEYFMHGIVDE 249
D+ + N L+ ++SDFGL++++ S+ P+ + PE M+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWS----PPEVLMYSKFSS 200
Query: 250 KTDVFAFGVFLLEIIS-GRKPVD 271
K+D++AFGV + EI S G+ P +
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
+ + + F + +G G V+K + + ++L + + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 121 VCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLH 179
P ++ G +G + + + GS+ + + ++ K+++ +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 180 YLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAP 239
YL + + +I+HRD+K SNIL+ + E ++ DFG++ L + + GT +++P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSP 172
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
E ++D+++ G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 27/252 (10%)
Query: 86 VLQDGEEIAVKRLTKVVTDDRKEKE---FLTEIGTIGHVCHPNVLSLLGC-CVDNGLYLI 141
V G+ +AVK++ D RK++ E+ + H NV+ + V + L+++
Sbjct: 45 VRSSGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 99
Query: 142 FQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILL 201
+F G++ + V + + + + + L LH + +IHRDIKS +ILL
Sbjct: 100 MEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILL 153
Query: 202 TADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
T D ++SDFG + + + GT +APE + D+++ G+ ++
Sbjct: 154 THDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 211
Query: 262 EIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRAS 321
E++ G P + P+ I + PRL+ + V+ + F L +R
Sbjct: 212 EMVDGEPP--------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLK-GFLDRLLVR-D 261
Query: 322 PTWRPTMSEVLE 333
P R T +E+L+
Sbjct: 262 PAQRATAAELLK 273
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 64 ATNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
+++ F +G G YA VYKG+ + G +A+K + K+ +++ + EI + +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIREISLMKELK 61
Query: 123 HPNVLSLLGCC-VDNGLYLIFQFSSRGSVASLFHDV--NSP-GVEWKVRHKIAVGTARGL 178
H N++ L +N L L+F+F + N+P G+E + +GL
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLA 238
+ H + +I+HRD+K N+L+ + ++ DFGLA+ S + T + A
Sbjct: 122 AFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRA 176
Query: 239 PEYFMHG-IVDEKTDVFAFGVFLLEIISGRKPVDGSH 274
P+ M D+++ G L E+I+G+ G++
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V G + ++A+K + + E EF+ E + ++ H ++ L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+++I ++ + G + + ++ + + ++ + YL ++ +HR
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHH--SIAPIEGTFGHLAPEYFMHGIVDE 249
D+ + N L+ ++SDFGL+++ L ++T S P+ + PE M+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWS----PPEVLMYSKFSS 185
Query: 250 KTDVFAFGVFLLEIIS-GRKPVD 271
K+D++AFGV + EI S G+ P +
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
+ + + F + +G G V+K + + ++L + + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 121 VCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLH 179
P ++ G +G + + + GS+ + + ++ K+++ +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 180 YLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAP 239
YL + + +I+HRD+K SNIL+ + E ++ DFG++ L + + GT +++P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSP 172
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
E ++D+++ G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
+ + + F + +G G V+K + + ++L + + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 121 VCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLH 179
P ++ G +G + + + GS+ + + ++ K+++ +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 180 YLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAP 239
YL + + +I+HRD+K SNIL+ + E ++ DFG++ L + + GT +++P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSP 172
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
E ++D+++ G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 13/222 (5%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTK--VVTDDRKEKEFLTEIG 116
+I + F ++G+G + +V+ + + A+K L K V+ DD E + E
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT-MVEKR 69
Query: 117 TIGHVCHPNVLSLLGCCVDN--GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGT 174
+ L+ + C L+ + ++ + G + ++H + + A
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEI 127
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
GL +LH + I++RD+K NILL D +I+DFG+ K + GT
Sbjct: 128 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTP 182
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
++APE + + D ++FGV L E++ G+ P G +
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 224
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
+ + + F + +G G V+K + + ++L + + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 121 VCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLH 179
P ++ G +G + + + GS+ + + ++ K+++ +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 180 YLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAP 239
YL + + +I+HRD+K SNIL+ + E ++ DFG++ L + + GT +++P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSP 172
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
E ++D+++ G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y K + DG+ + K L + +++ ++E+ + + HPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 133 CVD---NGLYLIFQFSSRGSVASLFHDVNSPGVEWK--VRHKIAVGTARGLHYLHKGCQR 187
+D LY++ ++ G +AS V + G + + + + + L K C R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLAS----VITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 188 R------IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
R ++HRD+K +N+ L ++ DFGLA+ L + GT +++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQ 187
Query: 242 FMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
+EK+D+++ G L E+ + P Q
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V G + ++A+K + + E EF+ E + ++ H ++ L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+++I ++ + G + + ++ + + ++ + YL ++ +HR
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHH--SIAPIEGTFGHLAPEYFMHGIVDE 249
D+ + N L+ ++SDFGL+++ L ++T S P+ + PE M+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEVLMYSKFSS 185
Query: 250 KTDVFAFGVFLLEIIS-GRKPVD 271
K+D++AFGV + EI S G+ P +
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 27/252 (10%)
Query: 86 VLQDGEEIAVKRLTKVVTDDRKEKE---FLTEIGTIGHVCHPNVLSLLGC-CVDNGLYLI 141
V G+ +AVK++ D RK++ E+ + H NV+ + V + L+++
Sbjct: 52 VRSSGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 106
Query: 142 FQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILL 201
+F G++ + V + + + + + L LH + +IHRDIKS +ILL
Sbjct: 107 MEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILL 160
Query: 202 TADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
T D ++SDFG + + + GT +APE + D+++ G+ ++
Sbjct: 161 THDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 218
Query: 262 EIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRAS 321
E++ G P + P+ I + PRL+ + V+ + F L +R
Sbjct: 219 EMVDGEPP--------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLK-GFLDRLLVR-D 268
Query: 322 PTWRPTMSEVLE 333
P R T +E+L+
Sbjct: 269 PAQRATAAELLK 280
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 42/296 (14%)
Query: 66 NAFSSENLVGRGGYAEV-----YKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
N S +G G + +V Y + D ++ K + + ++E+ + +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 121 V-CHPNVLSLLGCCVDNGLYLIF-QFSSRGSVASLFH--------DVNSPGV-------- 162
+ H N+++LLG C G L+ ++ G + + SP +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 163 EWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW 222
+ + + A+G+ +L + IHRD+ + NILLT +I DFGLA+ + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+ +APE + + ++DV+++G+FL E+ S G P G + S
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG--MPVDSKF 280
Query: 282 KPILNQGEIEKLVDPRLQGA--YDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
++ +G +++ P A YD+ + C A P RPT ++++++
Sbjct: 281 YKMIKEG--FRMLSPEHAPAEMYDIMK---------TCWDADPLKRPTFKQIVQLI 325
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
+ + + F + +G G V+K + + ++L + + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 121 VCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLH 179
P ++ G +G + + + GS+ + + ++ K+++ +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 180 YLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAP 239
YL + + +I+HRD+K SNIL+ + E ++ DFG++ L + + GT +++P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSP 172
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
E ++D+++ G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 37/222 (16%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G+G Y EV+ G + GE++AVK T + TEI + H N+L +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 134 VD-----NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC--- 185
+ LYLI + GS L+ + S ++ K K+A + GL +LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGS---LYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 186 --QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAPEY 241
+ I HRD+KS NIL+ + I+D GLA S I P GT ++ PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE- 216
Query: 242 FMHGIVDEK-----------TDVFAFGVFLLEIISGRKPVDG 272
++DE D+++FG+ L E+ R+ V G
Sbjct: 217 ----VLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSG 252
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 27/252 (10%)
Query: 86 VLQDGEEIAVKRLTKVVTDDRKEKE---FLTEIGTIGHVCHPNVLSLLGC-CVDNGLYLI 141
V G+ +AVK++ D RK++ E+ + H NV+ + V + L+++
Sbjct: 50 VRSSGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 104
Query: 142 FQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILL 201
+F G++ + V + + + + + L LH + +IHRDIKS +ILL
Sbjct: 105 MEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILL 158
Query: 202 TADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
T D ++SDFG + + + GT +APE + D+++ G+ ++
Sbjct: 159 THDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 216
Query: 262 EIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRAS 321
E++ G P + P+ I + PRL+ + V+ + F L +R
Sbjct: 217 EMVDGEPP--------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLK-GFLDRLLVR-D 266
Query: 322 PTWRPTMSEVLE 333
P R T +E+L+
Sbjct: 267 PAQRATAAELLK 278
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 42/296 (14%)
Query: 66 NAFSSENLVGRGGYAEV-----YKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
N S +G G + +V Y + D ++ K + + ++E+ + +
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 121 V-CHPNVLSLLGCCVDNGLYLIF-QFSSRGSVASLFH--------DVNSPGV-------- 162
+ H N+++LLG C G L+ ++ G + + SP +
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 163 EWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQW 222
+ + + A+G+ +L + IHRD+ + NILLT +I DFGLA+ + +
Sbjct: 161 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 223 THHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWA 281
+ +APE + + ++DV+++G+FL E+ S G P G + S
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG--MPVDSKF 275
Query: 282 KPILNQGEIEKLVDPRLQGA--YDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
++ +G +++ P A YD+ + C A P RPT ++++++
Sbjct: 276 YKMIKEG--FRMLSPEHAPAEMYDIMK---------TCWDADPLKRPTFKQIVQLI 320
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 123/299 (41%), Gaps = 60/299 (20%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F L+G GG+ +V+K + DG+ ++R+ +++ E+E + + + H N+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK--YNNEKAERE----VKALAKLDHVNI 67
Query: 127 LSLLGC---------CVDNGL---------------------YLIFQFSSRGSVASLFHD 156
+ GC D+ L ++ +F +G++
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 157 VNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK 216
++ + ++ +G+ Y+H +++IHRD+K SNI L + +I DFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 217 WLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
L + +GT +++PE ++ D++A G+ L E++ D + ++
Sbjct: 185 SLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFET 238
Query: 277 LHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLEVM 335
+ L G I + D + + T L +L + P RP SE+L +
Sbjct: 239 SKFFTD--LRDGIISDIFDKK-----EKTLLQKL-------LSKKPEDRPNTSEILRTL 283
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V G + ++A+K + + E EF+ E + ++ H ++ L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+++I ++ + G + + ++ + + ++ + YL ++ +HR
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 135
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHH--SIAPIEGTFGHLAPEYFMHGIVDE 249
D+ + N L+ ++SDFGL+++ L ++T S P+ + PE M+
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEVLMYSKFSS 191
Query: 250 KTDVFAFGVFLLEIIS-GRKPVD 271
K+D++AFGV + EI S G+ P +
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G + V G + ++A+K + + E EF+ E + ++ H ++ L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+++I ++ + G + + ++ + + ++ + YL ++ +HR
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 124
Query: 193 DIKSSNILLTADFEPQISDFGLAKW-LPSQWTHH--SIAPIEGTFGHLAPEYFMHGIVDE 249
D+ + N L+ ++SDFGL+++ L ++T S P+ + PE M+
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEVLMYSKFSS 180
Query: 250 KTDVFAFGVFLLEIIS-GRKPVD 271
K+D++AFGV + EI S G+ P +
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 24/273 (8%)
Query: 54 RCFSFEEISIATNAFSS----ENL--VGRGGYAEV---YKGVLQDGEEIAVKRLTKVVTD 104
R +F + I + F+ +NL +G G V Y +L+ +A+K+L++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQN 63
Query: 105 DRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEW 164
K E+ + V H N++ LL + +F V L S ++
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--LEEFQDVYIVMELMDANLSQVIQM 121
Query: 165 KVRHK----IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPS 220
++ H+ + G+ +LH IIHRD+K SNI++ +D +I DFGLA+ +
Sbjct: 122 ELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---T 175
Query: 221 QWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSW 280
T + P T + APE + E D+++ GV + E+I G G+ + W
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH-IDQW 234
Query: 281 AKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFA 313
K I G +LQ NR +A
Sbjct: 235 NKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 23/261 (8%)
Query: 74 VGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTI--GHVCHPNVLSLL 130
+GRG +A V + + + G+E A K L K E L EI + C P V++L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSC-PRVINLH 95
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+ + LI ++++ G + SL + V ++ G++YLH Q I
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNI 152
Query: 190 IHRDIKSSNILLTADF---EPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+H D+K NILL++ + + +I DFG+++ + + I GT +LAPE +
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDP 209
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQ 306
+ TD++ G+ +++ P G + LN ++ VD + V+Q
Sbjct: 210 ITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-----ETYLNISQVN--VDYSEETFSSVSQ 262
Query: 307 LNRLAFAASLCIRASPTWRPT 327
L F SL ++ +P RPT
Sbjct: 263 L-ATDFIQSLLVK-NPEKRPT 281
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 24/273 (8%)
Query: 54 RCFSFEEISIATNAFSS----ENL--VGRGGYAEV---YKGVLQDGEEIAVKRLTKVVTD 104
R +F + I + F+ +NL +G G V Y +L+ +A+K+L++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQN 63
Query: 105 DRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEW 164
K E+ + V H N++ LL + +F V L S ++
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--LEEFQDVYIVMELMDANLSQVIQM 121
Query: 165 KVRHK----IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPS 220
++ H+ + G+ +LH IIHRD+K SNI++ +D +I DFGLA+ +
Sbjct: 122 ELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---T 175
Query: 221 QWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSW 280
T + P T + APE + E D+++ GV + E+I G G+ + W
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH-IDQW 234
Query: 281 AKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFA 313
K I G +LQ NR +A
Sbjct: 235 NKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
+ + F + +G G V+K + + ++L + + + E+ +
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 89
Query: 123 HPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYL 181
P ++ G +G + + + GS+ + + ++ K+++ +GL YL
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 147
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEY 241
+ + +I+HRD+K SNIL+ + E ++ DFG++ L + + GT +++PE
Sbjct: 148 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPER 201
Query: 242 FMHGIVDEKTDVFAFGVFLLEIISGRKPV 270
++D+++ G+ L+E+ GR P+
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 27/252 (10%)
Query: 86 VLQDGEEIAVKRLTKVVTDDRKEKE---FLTEIGTIGHVCHPNVLSLLGC-CVDNGLYLI 141
V G+ +AVK++ D RK++ E+ + H NV+ + V + L+++
Sbjct: 95 VRSSGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149
Query: 142 FQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILL 201
+F G++ + V + + + + + L LH + +IHRDIKS +ILL
Sbjct: 150 MEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILL 203
Query: 202 TADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
T D ++SDFG + + + GT +APE + D+++ G+ ++
Sbjct: 204 THDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 261
Query: 262 EIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRAS 321
E++ G P + P+ I + PRL+ + V+ + F L +R
Sbjct: 262 EMVDGEPP--------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLK-GFLDRLLVR-D 311
Query: 322 PTWRPTMSEVLE 333
P R T +E+L+
Sbjct: 312 PAQRATAAELLK 323
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 35/192 (18%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG---LYLIFQFSS 146
GE +AVK L K + + EI + + H +++ GCC D G L L+ ++
Sbjct: 60 GEMVAVKAL-KADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVG--------TARGLHYLHKGCQRRIIHRDIKSSN 198
GS+ ++ RH I + G+ YLH + IHRD+ + N
Sbjct: 119 LGSLR-----------DYLPRHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARN 164
Query: 199 ILLTADFEPQISDFGLAKWLPSQWTHHSI-----APIEGTFGHLAPEYFMHGIVDEKTDV 253
+LL D +I DFGLAK +P + + +P+ F + APE +DV
Sbjct: 165 VLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV---FWY-APECLKEYKFYYASDV 220
Query: 254 FAFGVFLLEIIS 265
++FGV L E+++
Sbjct: 221 WSFGVTLYELLT 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG---LYLIFQFSS 146
GE +AVK L K + + EI + + H +++ GCC D G L L+ ++
Sbjct: 43 GEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGT--------ARGLHYLHKGCQRRIIHRDIKSSN 198
GS+ ++ RH I + G+ YLH + IHR++ + N
Sbjct: 102 LGSLR-----------DYLPRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARN 147
Query: 199 ILLTADFEPQISDFGLAKWLPSQWTHHSI-----APIEGTFGHLAPEYFMHGIVDEKTDV 253
+LL D +I DFGLAK +P ++ + +P+ F + APE +DV
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV---FWY-APECLKEYKFYYASDV 203
Query: 254 FAFGVFLLEIIS 265
++FGV L E+++
Sbjct: 204 WSFGVTLYELLT 215
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y K + DG+ + K L + +++ ++E+ + + HPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 133 CVD---NGLYLIFQFSSRGSVASLFHDVNSPGVEWK--VRHKIAVGTARGLHYLHKGCQR 187
+D LY++ ++ G +AS V + G + + + + + L K C R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLAS----VITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 188 R------IIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAP 239
R ++HRD+K +N+ L ++ DFGLA+ L H E GT +++P
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL----NHDEDFAKEFVGTPYYMSP 185
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
E +EK+D+++ G L E+ + P Q
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 92/197 (46%), Gaps = 9/197 (4%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G V+K + + ++L + + + E+ + P ++ G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+G + + + GS+ + + ++ K+++ +GL YL + + +I+HR
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLRE--KHKIMHR 132
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTD 252
D+K SNIL+ + E ++ DFG++ L + + + GT +++PE ++D
Sbjct: 133 DVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV----GTRSYMSPERLQGTHYSVQSD 188
Query: 253 VFAFGVFLLEIISGRKP 269
+++ G+ L+E+ GR P
Sbjct: 189 IWSMGLSLVEMAVGRYP 205
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 27/252 (10%)
Query: 86 VLQDGEEIAVKRLTKVVTDDRKEKE---FLTEIGTIGHVCHPNVLSLLGC-CVDNGLYLI 141
V G+ +AVK++ D RK++ E+ + H NV+ + V + L+++
Sbjct: 172 VRSSGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226
Query: 142 FQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILL 201
+F G++ + V + + + + + L LH + +IHRDIKS +ILL
Sbjct: 227 MEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILL 280
Query: 202 TADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
T D ++SDFG + + + GT +APE + D+++ G+ ++
Sbjct: 281 THDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 338
Query: 262 EIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRAS 321
E++ G P + P+ I + PRL+ + V+ + F L +R
Sbjct: 339 EMVDGEPP--------YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLK-GFLDRLLVR-D 388
Query: 322 PTWRPTMSEVLE 333
P R T +E+L+
Sbjct: 389 PAQRATAAELLK 400
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG---LYLIFQFSS 146
GE +AVK L K + + EI + + H +++ GCC D G L L+ ++
Sbjct: 43 GEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGT--------ARGLHYLHKGCQRRIIHRDIKSSN 198
GS+ ++ RH I + G+ YLH + IHR++ + N
Sbjct: 102 LGSLR-----------DYLPRHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARN 147
Query: 199 ILLTADFEPQISDFGLAKWLPSQWTHHSI-----APIEGTFGHLAPEYFMHGIVDEKTDV 253
+LL D +I DFGLAK +P ++ + +P+ F + APE +DV
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV---FWY-APECLKEYKFYYASDV 203
Query: 254 FAFGVFLLEIIS 265
++FGV L E+++
Sbjct: 204 WSFGVTLYELLT 215
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 17/245 (6%)
Query: 65 TNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVK--RLTKVVTD----DRKEKEFLTEIGT 117
+ +S+ + +G G + V+ V ++ +E+ VK + KV+ D D K + EI
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 118 IGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNS-PGVEWKVRHKIAVGTAR 176
+ V H N++ +L + G + + GS LF ++ P ++ + I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLV-MEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
+ YL + IIHRDIK NI++ DF ++ DFG A +L ++ GT +
Sbjct: 142 AVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEY 195
Query: 237 LAPEYFM-HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA-KPILNQGEIEKLV 294
APE M + + ++++ GV L ++ P +++ + P L E+ LV
Sbjct: 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLV 255
Query: 295 DPRLQ 299
LQ
Sbjct: 256 SGLLQ 260
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 74 VGRGGYAEVYKGVL------QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + +V+ QD +AVK L D K+F E + ++ H +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIV 78
Query: 128 SLLGCCVD-NGLYLIFQFSSRGSV----------ASLFHDVNSPG--VEWKVRHKIAVGT 174
G CV+ + L ++F++ G + A L + N P + ++ H IA
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH-IAQQI 137
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH----HSIAPI 230
A G+ YL + +HRD+ + N L+ + +I DFG+++ + S + H++ PI
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 231 EGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ PE M+ ++DV++ GV L EI + G++P
Sbjct: 195 RW----MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G V+K + + ++L + + + E+ + P ++ G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 134 VDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
+G + + + GS+ + + ++ K+++ +GL YL + + +I+HR
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLRE--KHKIMHR 148
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTD 252
D+K SNIL+ + E ++ DFG++ L + + GT +++PE ++D
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSD 204
Query: 253 VFAFGVFLLEIISGRKPVDGSHQSL 277
+++ G+ L+E+ GR P+ S+
Sbjct: 205 IWSMGLSLVEMAVGRYPIGSGSGSM 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEE-IAVKRLTKVVTDDRKEK 109
P W+ E+I + + +++G G ++EV + ++ +A+K + K + KE
Sbjct: 8 PRWK--QAEDIR---DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEG-KEG 61
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGV-EWKVR 167
EI + + HPN+++L G LYLI Q S G LF + G +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE---LFDRIVEKGFYTERDA 118
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNIL---LTADFEPQISDFGLAKWLPSQWTH 224
++ + YLH I+HRD+K N+L L D + ISDFGL+K +
Sbjct: 119 SRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG 172
Query: 225 HSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
++ GT G++APE + D ++ GV ++ G P
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEE-IAVKRLTKVVTDDRKEK 109
P W+ E+I + + +++G G ++EV + ++ +A+K + K + KE
Sbjct: 8 PRWK--QAEDIR---DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEG-KEG 61
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGV-EWKVR 167
EI + + HPN+++L G LYLI Q S G LF + G +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE---LFDRIVEKGFYTERDA 118
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNIL---LTADFEPQISDFGLAKWLPSQWTH 224
++ + YLH I+HRD+K N+L L D + ISDFGL+K +
Sbjct: 119 SRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG 172
Query: 225 HSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
++ GT G++APE + D ++ GV ++ G P
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEE-IAVKRLTKVVTDDRKEK 109
P W+ E+I + + +++G G ++EV + ++ +A+K + K + KE
Sbjct: 8 PRWK--QAEDIR---DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG-KEG 61
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGV-EWKVR 167
EI + + HPN+++L G LYLI Q S G LF + G +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE---LFDRIVEKGFYTERDA 118
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNIL---LTADFEPQISDFGLAKWLPSQWTH 224
++ + YLH I+HRD+K N+L L D + ISDFGL+K +
Sbjct: 119 SRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG 172
Query: 225 HSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
++ GT G++APE + D ++ GV ++ G P
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 66 NAFSSENLVGRGGYAEVYKGVLQDGE---EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
N ++ +G G + V +GV + + ++A+K L K T+ +E + E + +
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLD 394
Query: 123 HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLF----HDVNSPGVEWKVRHKIAVGTARGL 178
+P ++ L+G C L L+ + + G + ++ V ++ H++++G +
Sbjct: 395 NPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMG----M 449
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI-EGTFGHL 237
YL ++ +HR++ + N+LL +ISDFGL+K L + ++++ +
Sbjct: 450 KYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
APE ++DV+++GV + E +S G+KP
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYK-GVLQDGEEIAVKRLTKVVTDDRK-EKEFLTEI 115
E + N F ++G+GG+ EV V G+ A K+L K RK E L E
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 116 GTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG-- 173
+ V V+SL + + ++ ++ + +N +++ + H G
Sbjct: 236 QILEKVNSRFVVSL-----------AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 174 TARGLHYLHKGC-------QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS 226
AR + Y + C + RI++RD+K NILL +ISD GLA +P T
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--- 341
Query: 227 IAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILN 286
I GT G++APE + D +A G L E+I+G+ P + +
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK--------IK 393
Query: 287 QGEIEKLV 294
+ E+E+LV
Sbjct: 394 REEVERLV 401
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYK-GVLQDGEEIAVKRLTKVVTDDRK-EKEFLTEI 115
E + N F ++G+GG+ EV V G+ A K+L K RK E L E
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 116 GTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG-- 173
+ V V+SL + + ++ ++ + +N +++ + H G
Sbjct: 236 QILEKVNSRFVVSL-----------AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 174 TARGLHYLHKGC-------QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS 226
AR + Y + C + RI++RD+K NILL +ISD GLA +P T
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--- 341
Query: 227 IAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILN 286
I GT G++APE + D +A G L E+I+G+ P + +
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK--------IK 393
Query: 287 QGEIEKLV 294
+ E+E+LV
Sbjct: 394 REEVERLV 401
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 51 PTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEE-IAVKRLTKVVTDDRKEK 109
P W+ E+I + + +++G G ++EV + ++ +A+K + K + KE
Sbjct: 8 PRWK--QAEDIR---DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEG-KEG 61
Query: 110 EFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGV-EWKVR 167
EI + + HPN+++L G LYLI Q S G LF + G +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE---LFDRIVEKGFYTERDA 118
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNIL---LTADFEPQISDFGLAKWLPSQWTH 224
++ + YLH I+HRD+K N+L L D + ISDFGL+K +
Sbjct: 119 SRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG 172
Query: 225 HSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
++ GT G++APE + D ++ GV ++ G P
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDN-------GLYLIF 142
G +AVK+L++ + K E+ + V H N++SLL +YL+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 143 QFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLT 202
+ + +++ + + + + G+ +LH IIHRD+K SNI++
Sbjct: 109 ELMDANLCQVIHMELDHERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 203 ADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLE 262
+D +I DFGLA+ + T+ + P T + APE + D+++ G + E
Sbjct: 161 SDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
Query: 263 IISGRKPVDGSHQSLHSWAKPILNQG 288
++ G G+ + W K I G
Sbjct: 218 LVKGCVIFQGTDH-IDQWNKVIEQLG 242
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 74 VGRGGYAEVYKGVLQD---GEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G Y EV + +D G E A+K + K VT L E+ + + HPN++ L
Sbjct: 29 LGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RGLHYLHKGCQRR 188
D Y + RG LF ++ +V + + G YLHK
Sbjct: 87 YEFFEDKRNYYLVMEVYRG--GELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK---HN 141
Query: 189 IIHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
I+HRD+K N+LL + D +I DFGL+ + GT ++APE +
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE---VGGKMKERLGTAYYIAPE-VLRK 197
Query: 246 IVDEKTDVFAFGVFLLEIISGRKPVDGS 273
DEK DV++ GV L ++ G P G
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPPFGGQ 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
++ EN +GRG + EV K +Q G I A K++ K +D F EI + + HPN
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLDHPN 84
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSV------ASLFHDVNSPGVEWKVRHKIAVGTARGL 178
++ L DN +YL+ + + G + +F + ++ + V +A
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA------- 137
Query: 179 HYLHKGCQRRIIHRDIKSSNILL---TADFEPQISDFGL-AKWLPSQWTHHSIAPIEGTF 234
Y HK + HRD+K N L + D ++ DFGL A++ P + + GT
Sbjct: 138 -YCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV----GTP 189
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
+++P+ + G+ + D ++ GV + ++ G P
Sbjct: 190 YYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 74 VGRGGYAEVYKGVLQD---GEEIAVKRLTKV-VTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
+G G Y EV + +D G E A+K + K VT L E+ + + HPN++ L
Sbjct: 12 LGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 130 LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RGLHYLHKGCQRR 188
D Y + RG LF ++ +V + + G YLHK
Sbjct: 70 YEFFEDKRNYYLVMEVYRG--GELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK---HN 124
Query: 189 IIHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
I+HRD+K N+LL + D +I DFGL+ + GT ++APE +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE---VGGKMKERLGTAYYIAPE-VLRK 180
Query: 246 IVDEKTDVFAFGVFLLEIISGRKPVDGS 273
DEK DV++ GV L ++ G P G
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQ 208
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 36/249 (14%)
Query: 70 SENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC--HPNV 126
+ L+G G YA+V V LQ+G+E AVK + K R E+ T+ + C + N+
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSR--VFREVETL-YQCQGNKNI 73
Query: 127 LSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
L L+ D+ YL+F+ GS+ L H + ++ A L +LH
Sbjct: 74 LELIEFFEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNEREASRVVRDVAAALDFLHT-- 129
Query: 186 QRRIIHRDIKSSNILLTA--DFEP-QISDFGLAKWLPSQWTHHSIAPIE--------GTF 234
+ I HRD+K NIL + P +I DF L + ++S PI G+
Sbjct: 130 -KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMK---LNNSCTPITTPELTTPCGSA 185
Query: 235 GHLAPEYF-----MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGE 289
++APE D++ D+++ GV L ++SG P G H A ++GE
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG-----HCGADCGWDRGE 240
Query: 290 IEKLVDPRL 298
+ ++ +L
Sbjct: 241 VCRVCQNKL 249
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEEI--AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
++ EN +GRG + EV K +Q G I A K++ K +D F EI + + HPN
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLDHPN 67
Query: 126 VLSLLGCCVDN-GLYLIFQFSSRGSV------ASLFHDVNSPGVEWKVRHKIAVGTARGL 178
++ L DN +YL+ + + G + +F + ++ + V +A
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA------- 120
Query: 179 HYLHKGCQRRIIHRDIKSSNILL---TADFEPQISDFGL-AKWLPSQWTHHSIAPIEGTF 234
Y HK + HRD+K N L + D ++ DFGL A++ P + + GT
Sbjct: 121 -YCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV----GTP 172
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
+++P+ + G+ + D ++ GV + ++ G P
Sbjct: 173 YYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH G I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 20/266 (7%)
Query: 21 DGDNAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYA 80
DG++ + P G + + + ++ + SF+ + + +G G Y
Sbjct: 11 DGEDGSAEPPGPVKAEPAHTAASVAAKNLA-LLKARSFDVTFDVGDEYEIIETIGNGAYG 69
Query: 81 EVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL---LGCCVDN 136
V + G+++A+K++ K L E+ + H H N++++ L V
Sbjct: 70 VVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY 129
Query: 137 G----LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
G +Y++ + + H + P VR+ + RGL Y+H ++IHR
Sbjct: 130 GEFKSVYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFL-YQLLRGLKYMHSA---QVIHR 183
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAPEYF--MHGIVD 248
D+K SN+L+ + E +I DFG+A+ L + H E T + APE +H
Sbjct: 184 DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYT- 242
Query: 249 EKTDVFAFGVFLLEIISGRKPVDGSH 274
+ D+++ G E+++ R+ G +
Sbjct: 243 QAIDLWSVGCIFGEMLARRQLFPGKN 268
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 65 TNAFSSENLVGRGGYAEVYKGVLQDGEE--IAVKRLTKVVTDDRKEKEFLTEIGTIGHVC 122
++ F E+ +GRG + VY+ Q G + A+K L K V +K TEIG + +
Sbjct: 52 SDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLS 106
Query: 123 HPNVLSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG-TARGLHY 180
HPN++ L + L+ + + G LF + G + AV + Y
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGG---ELFDRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 181 LHKGCQRRIIHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
LH + I+HRD+K N+L D +I+DFGL+K + Q ++ GT G+
Sbjct: 164 LH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC---GTPGYC 217
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
APE + D+++ G+ ++ G +P
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH G I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 20/266 (7%)
Query: 21 DGDNAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYA 80
DG++ + P G + + + ++ + SF+ + + +G G Y
Sbjct: 10 DGEDGSAEPPGPVKAEPAHTAASVAAKNLA-LLKARSFDVTFDVGDEYEIIETIGNGAYG 68
Query: 81 EVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL---LGCCVDN 136
V + G+++A+K++ K L E+ + H H N++++ L V
Sbjct: 69 VVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY 128
Query: 137 G----LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHR 192
G +Y++ + + H + P VR+ + RGL Y+H ++IHR
Sbjct: 129 GEFKSVYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFL-YQLLRGLKYMHSA---QVIHR 182
Query: 193 DIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIE--GTFGHLAPEYF--MHGIVD 248
D+K SN+L+ + E +I DFG+A+ L + H E T + APE +H
Sbjct: 183 DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYT- 241
Query: 249 EKTDVFAFGVFLLEIISGRKPVDGSH 274
+ D+++ G E+++ R+ G +
Sbjct: 242 QAIDLWSVGCIFGEMLARRQLFPGKN 267
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA- 186
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 187 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 24/273 (8%)
Query: 54 RCFSFEEISIATNAFSS----ENL--VGRGGYAEV---YKGVLQDGEEIAVKRLTKVVTD 104
R +F + I + F+ +NL +G G V Y +L+ +A+K+L++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQN 63
Query: 105 DRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEW 164
K E+ + V H N++ LL + +F V L S ++
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--LEEFQDVYIVMELMDANLSQVIQM 121
Query: 165 KVRHK----IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPS 220
++ H+ + G+ +LH IIHRD+K SNI++ +D +I DFGLA+ +
Sbjct: 122 ELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---T 175
Query: 221 QWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSW 280
T + P T + APE + E D+++ G + E+I G G+ + W
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQW 234
Query: 281 AKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFA 313
K I G +LQ NR +A
Sbjct: 235 NKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH G I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS 218
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 15/244 (6%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 135 DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK----IAVGTARGLHYLHKGCQRRII 190
+ +F V L S ++ ++ H+ + G+ +LH II
Sbjct: 94 PQKS--LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---II 148
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRD+K SNI++ +D +I DFGLA+ + T + P T + APE + E
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
D+++ G + E+I G G+ + W K I G +LQ NR
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRP 264
Query: 311 AFAA 314
+A
Sbjct: 265 KYAG 268
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 15/244 (6%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 135 DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK----IAVGTARGLHYLHKGCQRRII 190
+ +F V L S ++ ++ H+ + G+ +LH II
Sbjct: 94 PQKS--LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---II 148
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEK 250
HRD+K SNI++ +D +I DFGLA+ + T + P T + APE + E
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 251 TDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRL 310
D+++ G + E+I G G+ + W K I G +LQ NR
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRP 264
Query: 311 AFAA 314
+A
Sbjct: 265 KYAG 268
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 21/247 (8%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+Y++ + + +++ + + + + G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQL 307
E D+++ G + E+I G G+ + W K I G +LQ
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
Query: 308 NRLAFAA 314
NR +A
Sbjct: 262 NRPKYAG 268
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG---IGIT 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 186
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 187 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 24/274 (8%)
Query: 54 RCFSFEEISIATNAFS----SENL--VGRGGYAEV---YKGVLQDGEEIAVKRLTKVVTD 104
R +F + I + F+ +NL +G G V Y +L+ +A+K+L++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQN 63
Query: 105 DRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEW 164
K E+ + V H N++ LL + +F V L S ++
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--LEEFQDVYIVMELMDANLSQVIQM 121
Query: 165 KVRHK----IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPS 220
++ H+ + G+ +LH IIHRD+K SNI++ +D +I DFGLA+ +
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---T 175
Query: 221 QWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSW 280
T + P T + APE + E D+++ G + E+I G G+ + W
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQW 234
Query: 281 AKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAA 314
K I G +LQ NR +A
Sbjct: 235 NKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAG 268
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH G I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 122/290 (42%), Gaps = 58/290 (20%)
Query: 73 LVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLS 128
++ GG+A VY+ QD G E A+KRL + ++ K + + E+ + + HPN++
Sbjct: 35 VLAEGGFAFVYEA--QDVGSGREYALKRL--LSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 129 LLGCCV------DNGL--YLIFQFSSRGSVASLFHDVNSPG-VEWKVRHKIAVGTARGLH 179
D G +L+ +G + + S G + KI T R +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 180 YLHKGCQRRIIHRDIKSSNILLTADFEPQISDFG----LAKWLPSQWTHHSIAPIEGTFG 235
++H+ + IIHRD+K N+LL+ ++ DFG ++ + W+ A +E
Sbjct: 151 HMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209
Query: 236 -HLAPEYFMHGIVD--------EKTDVFAFGVFL---------------LEIISGR---K 268
+ P Y I+D EK D++A G L L I++G+
Sbjct: 210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIP 269
Query: 269 PVDGSHQSLHSWAKPILNQGEIEKLVDP--RLQGAYDVTQLNRLAFAASL 316
P D + HS + +L V+P RL A V QL +A A ++
Sbjct: 270 PHDTQYTVFHSLIRAMLQ-------VNPEERLSIAEVVHQLQEIAAARNV 312
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 43 ACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKV 101
E++T P S + + + + +G G Y EVYK + E +A+KR+
Sbjct: 11 TLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE 70
Query: 102 VTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSP 160
++ + E+ + + H N++ L N L+LIF+++ + D N P
Sbjct: 71 HEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND--LKKYMDKN-P 127
Query: 161 GVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLT---ADFEP--QISDFGLA 215
V +V G+++ H RR +HRD+K N+LL+ A P +I DFGLA
Sbjct: 128 DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
Query: 216 KW--LP-SQWTHHSIA 228
+ +P Q+TH I
Sbjct: 185 RAFGIPIRQFTHEIIT 200
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 38 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 95
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+Y++ + + +++ + + + + G+ +LH
Sbjct: 96 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 148
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 149 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 248 DEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQG 288
E D+++ G + E+I G G+ + W K I G
Sbjct: 205 KENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLG 244
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 11/212 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM-HGIVDE 249
HRDIK N+LL +ISDFGLA + + GT ++APE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
DV++ G+ L +++G P D S ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 74 AQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 132 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--- 183
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 11/212 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 125
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG-IVDE 249
HRDIK N+LL +ISDFGLA + + GT ++APE E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
DV++ G+ L +++G P D S ++
Sbjct: 186 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 186
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 187 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 186
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 187 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+Y++ + + +++ + + + + G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQG 288
E D+++ G + E+I G G+ + W K I G
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLG 242
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 11/212 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM-HGIVDE 249
HRDIK N+LL +ISDFGLA + + GT ++APE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
DV++ G+ L +++G P D S ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 11/212 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG-IVDE 249
HRDIK N+LL +ISDFGLA + + GT ++APE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
DV++ G+ L +++G P D S ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 11/212 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG-IVDE 249
HRDIK N+LL +ISDFGLA + + GT ++APE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
DV++ G+ L +++G P D S ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 11/212 (5%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG-IVDE 249
HRDIK N+LL +ISDFGLA + + GT ++APE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 250 KTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
DV++ G+ L +++G P D S ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 37 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 94
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+Y++ + + +++ + + + + G+ +LH
Sbjct: 95 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 147
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 248 DEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQG 288
E D+++ G + E+I G G+ + W K I G
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLG 243
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 35 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 92
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 93 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 145
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 146 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 201
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 202 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G Y EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 95 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 147
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 87 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 139
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 140 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 88 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 140
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 141 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 95 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 147
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 88 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 140
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 141 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 87 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX-----GIKHLHSAG-- 139
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 140 -IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
+ ++ + + +G G Y+E + V + E AVK + K D +E E L G
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ---- 79
Query: 122 CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVAS--LFHDVNSPGVEWKVRHKIAVGTARG 177
HPN+++L D+G +YL+ + G + L S V H I +
Sbjct: 80 -HPNIITLKDV-YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG----KT 133
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADF-EPQ---ISDFGLAKWLPSQWTHHSIAPIEGT 233
+ YLH + ++HRD+K SNIL + P+ I DFG AK L ++
Sbjct: 134 VEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 234 FGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
F +APE DE D+++ G+ L +++G P
Sbjct: 191 F--VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 71 ENL--VGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTI--GHVCHPN 125
ENL +G G +V+K + G IAVK++ + + + K L ++ + H C P
Sbjct: 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKEENKRILMDLDVVLKSHDC-PY 85
Query: 126 VLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGC 185
++ G + N I G+ A + ++ K+ V + L+YL +
Sbjct: 86 IVQCFGTFITNTDVFI-AMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE-- 142
Query: 186 QRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF--- 242
+ +IHRD+K SNILL + ++ DFG++ L A G ++APE
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDPP 199
Query: 243 --MHGIVDEKTDVFAFGVFLLEIISGRKP 269
D + DV++ G+ L+E+ +G+ P
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y VL +A+K+L++ + K E+ + V H N++SLL
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+YL+ + + +++ + + + + G+ +LH
Sbjct: 132 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--- 183
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
+ ++ + + +G G Y+E + V + E AVK + K D +E E L G
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ---- 79
Query: 122 CHPNVLSLLGCCVDNG--LYLIFQFSSRGSVAS--LFHDVNSPGVEWKVRHKIAVGTARG 177
HPN+++L D+G +YL+ + G + L S V H I +
Sbjct: 80 -HPNIITLKDV-YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG----KT 133
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADF-EPQ---ISDFGLAKWLPSQWTHHSIAPIEGT 233
+ YLH + ++HRD+K SNIL + P+ I DFG AK L ++
Sbjct: 134 VEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 234 FGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
F +APE DE D+++ G+ L +++G P
Sbjct: 191 F--VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+Y++ + + +++ + + + + G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQG 288
E D+++ G + E+I G G+ + W K I G
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLG 242
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K KE E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ +++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+++ Q++DFGLAK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT 233
ARG+ +L R+ IHRD+ + NILL+ + +I DFGLA+ + +
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 234 FGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDG 272
+APE I K+DV+++GV L EI S G P G
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPG 304
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + K +TE+ + H+ H NV
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATAS-EYKALMTELKILTHIGHHLNV 93
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVAS 152
++LLG C G L +I ++ G++++
Sbjct: 94 VNLLGACTKQGGPLMVIVEYCKYGNLSN 121
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 71 ENLVGRGGYAEVYK-GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
E G+ AE Y +D +AVK L RK+ F E + ++ H +++
Sbjct: 25 EGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD--FQREAELLTNLQHEHIVKF 82
Query: 130 LGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPG----VEWKVRHK-----------IAVG 173
G C D + L ++F++ G + F + P V+ + R IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNK-FLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTH----HSIAP 229
A G+ YL + +HRD+ + N L+ A+ +I DFG+++ + S + H++ P
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 230 IEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
I + PE M+ ++DV++FGV L EI + G++P
Sbjct: 199 IRW----MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 23 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 79
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 80 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 139
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 140 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 191
Query: 198 NILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + WT + GT +LAPE + ++ D +A
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKGATWT------LCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 246 GVLIYEMAAGYPP 258
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 68 FSSENLVGRGGYAEVYKGVLQD----GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
F + +G G ++EV VL + G+ AVK + K KE EI + + H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKG-KESSIENEIAVLRKIKH 79
Query: 124 PNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGV-EWKVRHKIAVGTARGLHYL 181
N+++L N LYL+ Q S G LF + G K + ++YL
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGE---LFDRIVEKGFYTEKDASTLIRQVLDAVYYL 136
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGTFGHLA 238
H+ I+HRD+K N+L + E ISDFGL+K + ++ GT G++A
Sbjct: 137 HR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVA 190
Query: 239 PEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
PE + D ++ GV ++ G P
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 73 LVGRGGYAEVYKGVLQDGEEI--AVKRL-TKVVTDDRKEKEFLTEIGTI-GHVCHPNVLS 128
++G+G + +V EE+ AVK L K + ++EK ++E + +V HP ++
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 129 L-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGTARGLHYLHKGCQ 186
L + LY + + + G LF+ + + R + A A L YLH
Sbjct: 104 LHFSFQTADKLYFVLDYINGGE---LFYHLQRERCFLEPRARFYAAEIASALGYLH---S 157
Query: 187 RRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTFGHLAPEYFMHG 245
I++RD+K NILL + ++DFGL K H+S + GT +LAPE
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 246 IVDEKTDVFAFGVFLLEIISGRKP 269
D D + G L E++ G P
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKE---KEFLTEIGTIGHVCHPNVLSLL 130
+G G + +V+ L + ++R+ K + DR + ++ EI + + HPN++ +
Sbjct: 30 LGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 131 GCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRH--KIAVGTARGLHYLHKGCQR 187
D + +Y++ + G + + G + ++ L Y H +
Sbjct: 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---Q 143
Query: 188 RIIHRDIKSSNILL--TADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH 244
++H+D+K NIL T+ P +I DFGLA+ S + A GT ++APE F
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA---GTALYMAPEVFKR 200
Query: 245 GIVDEKTDVFAFGVFLLEIISGRKPVDGS 273
V K D+++ GV + +++G P G+
Sbjct: 201 D-VTFKCDIWSAGVVMYFLLTGCLPFTGT 228
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y V+K ++ EI A+KR+ D+ L EI + + H N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
D L L+F+F + + F N ++ ++ +GL + H R ++H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCH---SRNVLH 124
Query: 192 RDIKSSNILLTADFEPQISDFGLAK 216
RD+K N+L+ + E +++DFGLA+
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 65 TNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
T+ + +G+G ++ V + V L G E A K + R ++ E + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 124 PNVLSLLGCCVDNGL-YLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGLHY 180
N++ L + G YL+F + G LF D+ + E H I LH
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGE---LFEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
G ++HRD+K N+LL + + +++DFGLA + Q + GT G+L
Sbjct: 120 HQMG----VVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYL 173
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
+PE + D++A GV L ++ G P
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LAGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LXGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 68 FSSENLVGRGGYAEVY---KGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
F ++G+G + +V+ K D G A+K L K R E + V H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 124 PNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGLHY 180
P V+ L + LYLI F G LF ++ + E V+ +A A GL +
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGD---LFTRLSKEVMFTEEDVKFYLA-ELALGLDH 145
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHLAP 239
LH II+RD+K NILL + +++DFGL+K H A GT ++AP
Sbjct: 146 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAP 199
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGS 273
E D +++GV + E+++G P G
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGK 233
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 108/278 (38%), Gaps = 49/278 (17%)
Query: 74 VGRGGYAEVYKGVLQDGE--------EIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+GRG + VYKG+ D E E+ ++LTK + + F E + + HPN
Sbjct: 34 IGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTK-----SERQRFKEEAEXLKGLQHPN 86
Query: 126 VLSLLG----------CCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA 175
++ C V L+ + + G++ + + KV
Sbjct: 87 IVRFYDSWESTVKGKKCIV-----LVTELXTSGTLKTYLKRFKVXKI--KVLRSWCRQIL 139
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADF-EPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
+GL +LH IIHRD+K NI +T +I D GLA + + I GT
Sbjct: 140 KGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI----GTP 194
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLV 294
APE + DE DV+AFG LE + P + + + + V
Sbjct: 195 EFXAPEXYEEK-YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRR-------VTSGV 246
Query: 295 DPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
P ++D + + CIR + R ++ ++L
Sbjct: 247 KP---ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G ++ V + V + +E A K + R ++ E + HPN++ L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 133 CVDNGL-YLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGLHYLHKGCQRRI 189
+ G YL+F + G LF D+ + E H I ++++H Q I
Sbjct: 99 ISEEGFHYLVFDLVTGGE---LFEDIVAREYYSEADASHCIH-QILESVNHIH---QHDI 151
Query: 190 IHRDIKSSNILLTADFE---PQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+HRD+K N+LL + + +++DFGLA + Q + GT G+L+PE
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 247 VDEKTDVFAFGVFLLEIISGRKP 269
+ D++A GV L ++ G P
Sbjct: 210 YGKPVDIWACGVILYILLVGYPP 232
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G ++ V + V + G+E A K + R ++ E + HPN++ L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 133 CVDNGL-YLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGLHYLHKGCQRRI 189
+ G YLIF + G LF D+ + E H I LH G +
Sbjct: 90 ISEEGHHYLIFDLVTGGE---LFEDIVAREYYSEADASHCIQQILEAVLHCHQMG----V 142
Query: 190 IHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+HRD+K N+LL + + +++DFGLA + + + GT G+L+PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 247 VDEKTDVFAFGVFLLEIISGRKP 269
+ D++A GV L ++ G P
Sbjct: 201 YGKPVDLWACGVILYILLVGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 63 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 164
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + WT + GT +LAPE + ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEIILSKGYNK 218
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 74 VGRGGYAEVYKGVLQDGEE-IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G GG V+ V D ++ +A+K++ V+TD + K L EI I + H N++ +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 133 CVDNGLYLIFQFSSRGSVASLF-------HDV-----NSPGVEWKVRHKIAVGTARGLHY 180
+G L S + S++ D+ P +E R RGL Y
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHAR-LFMYQLLRGLKY 135
Query: 181 LHKGCQRRIIHRDIKSSNILL-TADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH--- 236
+H ++HRD+K +N+ + T D +I DFGLA+ + ++H EG
Sbjct: 136 IHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS-EGLVTKWYR 191
Query: 237 -----LAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQ 275
L+P + I D++A G E+++G+ G+H+
Sbjct: 192 SPRLLLSPNNYTKAI-----DMWAAGCIFAEMLTGKTLFAGAHE 230
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 34/243 (13%)
Query: 41 VVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTK 100
+++ S K + +E I L+G+G + +VY G E+A+ RL
Sbjct: 8 LLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAI-RLID 64
Query: 101 VVTDDRKE-KEFLTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSV-------AS 152
+ D+ + K F E+ H NV+ +G C+ I +G A
Sbjct: 65 IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK 124
Query: 153 LFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDF 212
+ DVN K R +IA +G+ YLH + I+H+D+KS N+ + + I+DF
Sbjct: 125 IVLDVN------KTR-QIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDF 173
Query: 213 GL---AKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVD---------EKTDVFAFGVFL 260
GL + L + + G HLAPE D + +DVFA G
Sbjct: 174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233
Query: 261 LEI 263
E+
Sbjct: 234 YEL 236
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 12/201 (5%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G ++ V + + + G+E A K + R ++ E + HPN++ L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 133 CVDNGL-YLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
+ G YL+F + G LF D+ + E+ + + L ++ I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGE---LFEDIVA--REYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 192 RDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVD 248
RD+K N+LL + + +++DFGLA + Q + GT G+L+PE
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 249 EKTDVFAFGVFLLEIISGRKP 269
+ D++A GV L ++ G P
Sbjct: 185 KPVDMWACGVILYILLVGYPP 205
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKE-KEFLTEIG 116
+ N F L+G+G + +V +L G A+K L K V + E +TE
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 117 TIGHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGT 174
+ + HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE---LFFHLSRERVFTEERARFYGAEI 117
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
L YLH R +++RDIK N++L D +I+DFGL K S ++ GT
Sbjct: 118 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTP 172
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
+LAPE D + GV + E++ GR P + H+ L
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 216
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K KE E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ +++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+++ +++DFGLAK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKE-KEFLTEIG 116
+ N F L+G+G + +V +L G A+K L K V + E +TE
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 117 TIGHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGT 174
+ + HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE---LFFHLSRERVFTEERARFYGAEI 119
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
L YLH R +++RDIK N++L D +I+DFGL K S ++ GT
Sbjct: 120 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTP 174
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
+LAPE D + GV + E++ GR P + H+ L
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 218
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 14/216 (6%)
Query: 61 ISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGTIG 119
+ + + ++GRG + EV + +++ A+K L+K R + F E I
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 120 HVCHPNVLSLLGCCV--DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARG 177
+ + L C D LY++ ++ G + +L + + P K V
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA 189
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
+H + +IHRD+K N+LL +++DFG + H + GT ++
Sbjct: 190 IHSMG------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYI 242
Query: 238 APEYFM----HGIVDEKTDVFAFGVFLLEIISGRKP 269
+PE G + D ++ GVFL E++ G P
Sbjct: 243 SPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKE-KEFLTEIG 116
+ N F L+G+G + +V +L G A+K L K V + E +TE
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 117 TIGHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGT 174
+ + HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE---LFFHLSRERVFTEERARFYGAEI 114
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
L YLH R +++RDIK N++L D +I+DFGL K S ++ GT
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTP 169
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
+LAPE D + GV + E++ GR P + H+ L
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKE-KEFLTEIG 116
+ N F L+G+G + +V +L G A+K L K V + E +TE
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 117 TIGHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGT 174
+ + HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE---LFFHLSRERVFTEERARFYGAEI 114
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
L YLH R +++RDIK N++L D +I+DFGL K S ++ GT
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTP 169
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
+LAPE D + GV + E++ GR P + H+ L
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 18/250 (7%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNIL 200
+ ++ + G + S + E R A YLH +I+RD+K N+L
Sbjct: 119 VMEYVAGGEMFSHLRRIGR-FAEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 201 LTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVF 259
+ Q++DFG AK + + W + GT +LAPE + ++ D +A GV
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 260 LLEIISGRKP 269
+ E+ +G P
Sbjct: 228 IYEMAAGYPP 237
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT 233
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 234 FGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEK 292
+APE + ++DV++FGV L EI S G P G + L +G +
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGTRMR 314
Query: 293 LVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
D Y T L+ C P+ RPT SE++E
Sbjct: 315 APDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 346
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 86
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
++LLG C G L +I +F G++++ + V +K +
Sbjct: 87 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 129
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G YA VYKG + + + + ++ ++ + E+ + + H N+++L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 134 -VDNGLYLIFQFSSRGSVASLFHD----VNSPGVEWKVRHKIAVGTARGLHYLHKGCQRR 188
+ L L+F++ + + D +N V+ RGL Y H+ ++
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKL-----FLFQLLRGLAYCHR---QK 120
Query: 189 IIHRDIKSSNILLTADFEPQISDFGL--AKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
++HRD+K N+L+ E +++DFGL AK +P++ + + T + P+ + G
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV----TLWYRPPDILL-GS 175
Query: 247 VDEKT--DVFAFGVFLLEIISGRKPVDGS 273
D T D++ G E+ +GR GS
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGS 204
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT 233
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 234 FGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEK 292
+APE + ++DV++FGV L EI S G P G + L +G +
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGTRMR 321
Query: 293 LVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
D Y T L+ C P+ RPT SE++E
Sbjct: 322 APDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 353
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 93
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
++LLG C G L +I +F G++++ + V +K +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 136
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKE-KEFLTEIG 116
+ N F L+G+G + +V +L G A+K L K V + E +TE
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 117 TIGHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGT 174
+ + HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE---LFFHLSRERVFTEERARFYGAEI 114
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
L YLH R +++RDIK N++L D +I+DFGL K S ++ GT
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTP 169
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
+LAPE D + GV + E++ GR P + H+ L
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT 233
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 234 FGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEK 292
+APE + ++DV++FGV L EI S G P G + L +G +
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGTRMR 316
Query: 293 LVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
D Y T L+ C P+ RPT SE++E
Sbjct: 317 APDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 348
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 88
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
++LLG C G L +I +F G++++ + V +K +
Sbjct: 89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 131
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT 233
A+G+ +L R+ IHRD+ + NILL+ +I DFGLA+ + +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 234 FGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLHSWAKPILNQGEIEK 292
+APE + ++DV++FGV L EI S G P G + L +G +
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--LKEGTRMR 323
Query: 293 LVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
D Y T L+ C P+ RPT SE++E
Sbjct: 324 APDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVE 355
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 74 VGRGGYAEVYK----GVLQDG--EEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHP-NV 126
+GRG + +V + G+ + +AVK L + T + + ++E+ + H+ H NV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 95
Query: 127 LSLLGCCVDNG--LYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
++LLG C G L +I +F G++++ + V +K +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 138
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 35/192 (18%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG---LYLIFQFSS 146
GE +AVK L + + + EI + + H +++ GCC D G + L+ ++
Sbjct: 38 GEMVAVKALKEGCGPQLRSG-WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGT--------ARGLHYLHKGCQRRIIHRDIKSSN 198
GS+ ++ RH + + G+ YLH + IHR + + N
Sbjct: 97 LGSLR-----------DYLPRHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARN 142
Query: 199 ILLTADFEPQISDFGLAKWLPSQWTHHSI-----APIEGTFGHLAPEYFMHGIVDEKTDV 253
+LL D +I DFGLAK +P ++ + +P+ F + APE +DV
Sbjct: 143 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV---FWY-APECLKECKFYYASDV 198
Query: 254 FAFGVFLLEIIS 265
++FGV L E+++
Sbjct: 199 WSFGVTLYELLT 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKE-KEFLTEIG 116
+ N F L+G+G + +V +L G A+K L K V + E +TE
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 117 TIGHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGT 174
+ + HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE---LFFHLSRERVFTEERARFYGAEI 114
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
L YLH R +++RDIK N++L D +I+DFGL K S ++ GT
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTP 169
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
+LAPE D + GV + E++ GR P + H+ L
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 35/192 (18%)
Query: 90 GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNG---LYLIFQFSS 146
GE +AVK L + + + EI + + H +++ GCC D G + L+ ++
Sbjct: 37 GEMVAVKALKEGCGPQLRSG-WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGT--------ARGLHYLHKGCQRRIIHRDIKSSN 198
GS+ ++ RH + + G+ YLH + IHR + + N
Sbjct: 96 LGSLR-----------DYLPRHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARN 141
Query: 199 ILLTADFEPQISDFGLAKWLPSQWTHHSI-----APIEGTFGHLAPEYFMHGIVDEKTDV 253
+LL D +I DFGLAK +P ++ + +P+ F + APE +DV
Sbjct: 142 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV---FWY-APECLKECKFYYASDV 197
Query: 254 FAFGVFLLEIIS 265
++FGV L E+++
Sbjct: 198 WSFGVTLYELLT 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 12/201 (5%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G ++ V + + + G+E A K + R ++ E + HPN++ L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 133 CVDNGL-YLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
+ G YL+F + G LF D+ + E+ + + L ++ I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGE---LFEDIVAR--EYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 192 RDIKSSNILLTADFE---PQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVD 248
RD+K N+LL + + +++DFGLA + Q + GT G+L+PE
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 249 EKTDVFAFGVFLLEIISGRKP 269
+ D++A GV L ++ G P
Sbjct: 185 KPVDMWACGVILYILLVGYPP 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVYKGVL----QDGEEIAVKRLTKVVTDDRKE-KEFLTEIG 116
+ N F L+G+G + +V +L G A+K L K V + E +TE
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 117 TIGHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGT 174
+ + HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE---LFFHLSRERVFTEERARFYGAEI 114
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTF 234
L YLH R +++RDIK N++L D +I+DFGL K S ++ GT
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTP 169
Query: 235 GHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
+LAPE D + GV + E++ GR P + H+ L
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 59
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 60 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 119
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 120 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 171
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ + G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 73 LVGRGGYAEVYKGVLQD-GEEIAVK--RLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLS 128
++G+G ++ V + + ++ G++ AVK + K + E L +I H+ HP+++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 129 LLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR----GLHYLHK 183
LL +G LY++F+F + F V + +A R L Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLC--FEIVKRADAGFVYSEAVASHYMRQILEALRYCH- 147
Query: 184 GCQRRIIHRDIKSSNILLTA--DFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPE 240
IIHRD+K N+LL + + P ++ DFG+A L GT +APE
Sbjct: 148 --DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--VAGGRVGTPHFMAPE 203
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ DV+ GV L ++SG P G+ + L
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 240
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 41 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 98
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+Y++ + + +++ + + + + G+ +LH
Sbjct: 99 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 151
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 152 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 207
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 208 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 249
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 30 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 87
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+Y++ + + +++ + + + + G+ +LH
Sbjct: 88 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--- 139
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 197 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 238
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G G Y V+K ++ EI A+KR+ D+ L EI + + H N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 133 C-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIH 191
D L L+F+F + + F N ++ ++ +GL + H R ++H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCH---SRNVLH 124
Query: 192 RDIKSSNILLTADFEPQISDFGLAK 216
RD+K N+L+ + E ++++FGLA+
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLAR 149
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 17/215 (7%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+G G EV V + EE ++ + + EI + H NV+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 134 VDNGL-YLIFQFSSRGSVASLFH-DVNSPGVE-WKVRHKIAVGTARGLHYLHKGCQRRII 190
+ + YL ++ S G + D+ P + + H++ G YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF----MHGI 246
HRDIK N+LL +ISDFGLA + + GT ++APE H
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA- 185
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWA 281
E DV++ G+ L +++G P D S ++
Sbjct: 186 --EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 23 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 79
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 80 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 139
Query: 141 IFQFSSRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + P + A YLH +I+RD+K
Sbjct: 140 VMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 191
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 246 GVLIYEMAAGYPP 258
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ +++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+++ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+Y++ + + +++ + + + + G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 66 NAFSSENLVGRGGYAEVY---KGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
+ F ++G+G + +V+ K D ++ A+K L K R E + V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 122 CHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGL 178
HP ++ L + LYLI F G LF ++ + E V+ +A A L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGD---LFTRLSKEVMFTEEDVKFYLA-ELALAL 139
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+LH II+RD+K NILL + +++DFGL+K H A GT ++
Sbjct: 140 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 193
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGS 273
APE + D ++FGV + E+++G P G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKE-KEFLTEIGTI 118
+ N F L+G+G + +V ++++ G A+K L K V + E LTE +
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 205
Query: 119 GHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGTAR 176
+ HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 206 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIVS 262
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L YLH ++ +++RD+K N++L D +I+DFGL K ++ GT +
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEY 318
Query: 237 LAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
LAPE D + GV + E++ GR P + H+ L
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 360
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKE-KEFLTEIGTI 118
+ N F L+G+G + +V ++++ G A+K L K V + E LTE +
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 202
Query: 119 GHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGTAR 176
+ HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 203 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIVS 259
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L YLH ++ +++RD+K N++L D +I+DFGL K ++ GT +
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEY 315
Query: 237 LAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
LAPE D + GV + E++ GR P + H+ L
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 357
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I +I T +F LV
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ +++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 66 NAFSSENLVGRGGYAEVY---KGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
+ F ++G+G + +V+ K D ++ A+K L K R E + V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 122 CHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGL 178
HP ++ L + LYLI F G LF ++ + E V+ +A A L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGD---LFTRLSKEVMFTEEDVKFYLA-ELALAL 139
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+LH II+RD+K NILL + +++DFGL+K H A GT ++
Sbjct: 140 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 193
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGS 273
APE + D ++FGV + E+++G P G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAKEDFLK-KWE--SPAQNTAHLDQFERIKTLGTGSFGRVM 59
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 119
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ G + S + + P + A YLH +I+RD+K
Sbjct: 120 VMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 171
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 63 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 164
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 218
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + ++ +G P
Sbjct: 225 GVLIYQMAAGYPP 237
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 74 VGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKE-KEFLTEIGTIGHVCHPNVLSLLG 131
+G+G + +V D +++ A+K + K +R E + E+ + + HP +++L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 132 CCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
D ++++ G + +H + + + L YL +RII
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLR--YHLQQNVHFKEETVKLFICELVMALDYLQN---QRII 137
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMH---GIV 247
HRD+K NILL I+DF +A LP + I + GT ++APE F
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRE---TQITTMAGTKPYMAPEMFSSRKGAGY 194
Query: 248 DEKTDVFAFGVFLLEIISGRKP 269
D ++ GV E++ GR+P
Sbjct: 195 SFAVDWWSLGVTAYELLRGRRP 216
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 66 NAFSSENLVGRGGYAEVY---KGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGTIGHV 121
+ F ++G+G + +V+ K D ++ A+K L K R E + V
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 122 CHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGL 178
HP ++ L + LYLI F G LF ++ + E V+ +A A L
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGD---LFTRLSKEVMFTEEDVKFYLA-ELALAL 140
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIA-PIEGTFGHL 237
+LH II+RD+K NILL + +++DFGL+K H A GT ++
Sbjct: 141 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 194
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGS 273
APE + D ++FGV + E+++G P G
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 230
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 75 GRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
+G Y +L+ +A+K+L++ + K E+ + V H N++ LL
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 135 DN-------GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
+Y++ + + +++ + + + + G+ +LH
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSAG-- 146
Query: 188 RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIV 247
IIHRD+K SNI++ +D +I DFGLA+ + T + P T + APE +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 248 DEKTDVFAFGVFLLEII------SGRKPVDGSHQSLHSWAKP 283
E D+++ G + E++ GR +D ++ + P
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 65 TNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
++ + + +G+G ++ V + V + G E A K + R ++ E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 124 PNVLSLLGCCVDNGL-YLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGLHY 180
PN++ L + YL+F + G LF D+ + E H I + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDIVAREFYSEADASHCIQ-QILESIAY 120
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
H I+HR++K N+LL + + +++DFGLA + H A GT G+L
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYL 174
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
+PE + D++A GV L ++ G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 65 TNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
++ + + +G+G ++ V + V + G E A K + R ++ E + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 124 PNVLSLLGCCVDNGL-YLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGLHY 180
PN++ L + YL+F + G LF D+ + E H I + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDIVAREFYSEADASHCIQ-QILESIAY 119
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
H I+HR++K N+LL + + +++DFGLA + H A GT G+L
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYL 173
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
+PE + D++A GV L ++ G P
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAACKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+++ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 171 NLIIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIIISKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT LAPE + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEALAPEIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 74 VGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G ++ V + V + G E A K + R ++ E + HPN++ L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 133 CVDNGL-YLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGLHYLHKGCQRRI 189
+ YL+F + G LF D+ + E H I + Y H I
Sbjct: 97 IQEESFHYLVFDLVTGGE---LFEDIVAREFYSEADASHCIQ-QILESIAYCHSNG---I 149
Query: 190 IHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+HR++K N+LL + + +++DFGLA + H A GT G+L+PE
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLSPEVLKKDP 206
Query: 247 VDEKTDVFAFGVFLLEIISGRKP 269
+ D++A GV L ++ G P
Sbjct: 207 YSKPVDIWACGVILYILLVGYPP 229
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 63 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 135 DN-GLYLIFQFSSRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + P + A YLH +I
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLI 164
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 218
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I +I T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ +++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 65 TNAFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
++ + + +G+G ++ V + V + G E A K + R ++ E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 124 PNVLSLLGCCVDNGL-YLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGLHY 180
PN++ L + YL+F + G LF D+ + E H I + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDIVAREFYSEADASHCIQ-QILESIAY 120
Query: 181 LHKGCQRRIIHRDIKSSNILLTADFE---PQISDFGLAKWLPSQWTHHSIAPIEGTFGHL 237
H I+HR++K N+LL + + +++DFGLA + H A GT G+L
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYL 174
Query: 238 APEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
+PE + D++A GV L ++ G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 92/222 (41%), Gaps = 29/222 (13%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F +GRGG+ V++ + D A+KR+ ++ + ++ + E+ + + HP +
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKLEHPGI 65
Query: 127 LSLLGCCVDNG-------------LYLIFQFSSRGSVASLFH-DVNSPGVEWKVRHKIAV 172
+ ++ LY+ Q + ++ + E V I +
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSI-APIE 231
A + +LH + ++HRD+K SNI T D ++ DFGL + ++ P+
Sbjct: 126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 232 ---------GTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEII 264
GT +++PE K D+F+ G+ L E++
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 81 EVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNGL-- 138
E++KG Q G +I VK L RK ++F E + HPNVL +LG C
Sbjct: 25 ELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 139 -YLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
LI + GS+ ++ H+ + V+ K A+ ARG+ +LH + I + S
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSR 142
Query: 198 NILLTADFEPQIS--DFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVD---EKTD 252
++++ D +IS D + P + AP +APE D D
Sbjct: 143 SVMIDEDMTARISMADVKFSFQSPGR----MYAP-----AWVAPEALQKKPEDTNRRSAD 193
Query: 253 VFAFGVFLLEIISGRKP 269
+++F V L E+++ P
Sbjct: 194 MWSFAVLLWELVTREVP 210
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWE--SPAQNTAHLDQFERIKTLGTGSFGRVM 59
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 119
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ G + S + + P + A YLH +I+RD+K
Sbjct: 120 VMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 171
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKE-KEFLTEIGTI 118
+ N F L+G+G + +V ++++ G A+K L K V + E LTE +
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 119 GHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGTAR 176
+ HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIVS 119
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L YLH ++ +++RD+K N++L D +I+DFGL K ++ GT +
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEY 175
Query: 237 LAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
LAPE D + GV + E++ GR P + H+ L
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 217
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
+ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 HK----------ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKE-KEFLTEIGTI 118
+ N F L+G+G + +V ++++ G A+K L K V + E LTE +
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 63
Query: 119 GHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGTAR 176
+ HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 64 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIVS 120
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L YLH ++ +++RD+K N++L D +I+DFGL K ++ GT +
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEY 176
Query: 237 LAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
LAPE D + GV + E++ GR P + H+ L
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 218
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWE--SPAQNTAHLDQFERIKTLGTGSFGRVM 59
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 119
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ G + S + + P + A YLH +I+RD+K
Sbjct: 120 VMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 171
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 63 IATNAFSSENLVGRGGYAEVYKGVLQD---GEEIAVKRLTKVVTDDRKE-KEFLTEIGTI 118
+ N F L+G+G + +V ++++ G A+K L K V + E LTE +
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 119 GHVCHPNVLSL-LGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI-AVGTAR 176
+ HP + +L + L + ++++ G LF ++ V + R +
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIVS 121
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L YLH ++ +++RD+K N++L D +I+DFGL K ++ GT +
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEY 177
Query: 237 LAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPV-DGSHQSL 277
LAPE D + GV + E++ GR P + H+ L
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 219
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
+ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 HK----------ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I +I T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ +++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 23 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWE--SPAQNTAHLDQFERIKTLGTGSFGRVM 79
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 80 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 139
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ G + S + + P + A YLH +I+RD+K
Sbjct: 140 VMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 191
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 246 GVLIYEMAAGYPP 258
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
+ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 HK----------ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ ++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ Q++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 119/307 (38%), Gaps = 41/307 (13%)
Query: 11 RLFSLKRRSFDGDNAAVSPNGFTEESLENVVVACESETTKPTWR---------------C 55
RL L++ DG A + F+ E+L ++++ E R
Sbjct: 5 RLRQLEQFILDGP-AQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWAKPFT 63
Query: 56 FSFEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTE 114
+++ + F ++GRG + EV L++ +++ A+K L K R E E
Sbjct: 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFRE 123
Query: 115 IGTIGHVCHPNVLSLLGCCV--DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK--- 169
+ ++ L DN LYL+ + G + +L E R
Sbjct: 124 ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE 183
Query: 170 --IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSI 227
IA+ + LHY +HRDIK NIL+ + +++DFG L T S
Sbjct: 184 MVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS 234
Query: 228 APIEGTFGHLAPEYFM-----HGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAK 282
+ GT +++PE G + D ++ GV + E++ G P +SL
Sbjct: 235 VAV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA--ESLVETYG 291
Query: 283 PILNQGE 289
I+N E
Sbjct: 292 KIMNHKE 298
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ +++ G + S + + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+++ +++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWETPS--QNTAQLDQFDRIKTLGTGSFGRVM 58
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 59 LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ ++ + G + S + + P + A YLH +I+RD+K
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 170
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+L+ Q++DFG AK + + W + GT +LAP + ++ D +A
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPAIILSKGYNKAVDWWAL 224
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 225 GVLIYEMAAGYPP 237
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 48/293 (16%)
Query: 61 ISIATNAFSSENLVGRGGYAE-VYKGVLQDGEEIAVKR-LTKVVTDDRKEKEFLTEIGTI 118
+ + +F ++++G G VY+G+ D ++AVKR L + + +E + L E
Sbjct: 19 VIVGKISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDE- 76
Query: 119 GHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFH------DVNSPGVEWKVRHKIAV 172
HPNV+ D FQ+ + A+ D G+E +
Sbjct: 77 ----HPNVIRYFCTEKDRQ----FQYIAIELCAATLQEYVEQKDFAHLGLEPIT---LLQ 125
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLT-----ADFEPQISDFGLAKWLP-SQWTHHS 226
T GL +LH I+HRD+K NIL++ + ISDFGL K L + +
Sbjct: 126 QTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 227 IAPIEGTFGHLAPEYFMHGIVDEKT---DVFAFGVFLLEIISGRKPVDGSH---QSLHSW 280
+ + GT G +APE + T D+F+ G +IS +GSH +SL
Sbjct: 183 RSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS-----EGSHPFGKSLQRQ 237
Query: 281 AKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
A +L ++ L + + + ++ I P RP+ VL+
Sbjct: 238 ANILLGACSLDCLHPEKHEDVIARELIEKM-------IAMDPQKRPSAKHVLK 283
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P + L
Sbjct: 63 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ +++ G + S + + P + A YLH +I
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 164
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+++ +++DFG AK + + W + GT +LAPE + ++
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 218
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 71 ENLVGRGGYAEVYKGVLQDGEE-IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSL 129
++L+GRG Y VY ++ E+ +A+K++ ++ D K L EI + + ++ L
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 130 LGCCVDNGL------YLIFQFSSRGSVASLFHDVNSPGVEWKVRHK-IAVGTARGLHYLH 182
+ + L Y++ + + + LF +P + K I G +++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIAD-SDLKKLF---KTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 183 KGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQ 221
+ IIHRD+K +N LL D ++ DFGLA+ + S+
Sbjct: 147 ESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G+G ++ V + V + G+E A + R ++ E + HPN++ L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 133 CVDNGL-YLIFQFSSRGSVASLFHDVNSPGV--EWKVRHKIAVGTARGLHYLHKGCQRRI 189
+ G YLIF + G LF D+ + E H I LH G +
Sbjct: 79 ISEEGHHYLIFDLVTGGE---LFEDIVAREYYSEADASHCIQQILEAVLHCHQMG----V 131
Query: 190 IHRDIKSSNILLTADFE---PQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
+HR++K N+LL + + +++DFGLA + + + GT G+L+PE
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDP 189
Query: 247 VDEKTDVFAFGVFLLEIISGRKP 269
+ D++A GV L ++ G P
Sbjct: 190 YGKPVDLWACGVILYILLVGYPP 212
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P ++ L
Sbjct: 62 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 135 DN-GLYLIFQFSSRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ +++ G + S + P + A YLH +I
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLI 163
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+++ +++DFG AK + + W + GT +LAPE + ++
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 217
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 218 AVDWWALGVLIYEMAAGYPP 237
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+L+ + +I DFGLA+ + H + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 118/294 (40%), Gaps = 45/294 (15%)
Query: 66 NAFSSENLVGRGGYAEV-YKGVLQDGEEIAVKRLTKVVTD-DRKEKEFLTEIGTIGHVCH 123
N SE ++G G V ++G Q G +AVKR+ D E + LTE H
Sbjct: 33 NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDD-----H 86
Query: 124 PNVLSLLGC-CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK-----IAVGTARG 177
PNV+ D LY+ + + ++ L N K++ + + A G
Sbjct: 87 PNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 178 LHYLHKGCQRRIIHRDIKSSNILL------TAD-------FEPQISDFGLAKWLPSQWT- 223
+ +LH +IIHRD+K NIL+ TAD ISDFGL K L S
Sbjct: 146 VAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 224 -HHSIAPIEGTFGHLAPEYFMHGI---VDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLH 278
++ GT G APE + D+F+ G I+S G+ P +
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 279 SWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ + I + E++ L D L + T L S I P RPT +VL
Sbjct: 263 NIIRGIFSLDEMKCLHDRSLIA--EATDL------ISQMIDHDPLKRPTAMKVL 308
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 118/294 (40%), Gaps = 45/294 (15%)
Query: 66 NAFSSENLVGRGGYAEV-YKGVLQDGEEIAVKRLTKVVTD-DRKEKEFLTEIGTIGHVCH 123
N SE ++G G V ++G Q G +AVKR+ D E + LTE H
Sbjct: 33 NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDD-----H 86
Query: 124 PNVLSLLGC-CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK-----IAVGTARG 177
PNV+ D LY+ + + ++ L N K++ + + A G
Sbjct: 87 PNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 178 LHYLHKGCQRRIIHRDIKSSNILL------TAD-------FEPQISDFGLAKWLPSQWT- 223
+ +LH +IIHRD+K NIL+ TAD ISDFGL K L S
Sbjct: 146 VAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 224 -HHSIAPIEGTFGHLAPEYFMHGI---VDEKTDVFAFGVFLLEIIS-GRKPVDGSHQSLH 278
++ GT G APE + D+F+ G I+S G+ P +
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 279 SWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ + I + E++ L D L + T L S I P RPT +VL
Sbjct: 263 NIIRGIFSLDEMKCLHDRSLIA--EATDL------ISQMIDHDPLKRPTAMKVL 308
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 62 SIATNAFSSENLVGRGGYAEVY---KGVLQD-GEEIAVKRLTK--VVTDDRKEKEFLTEI 115
+ F ++G G Y +V+ K D G+ A+K L K +V + + TE
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 116 GTIGHVCHPNVLSLLGCC--VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG 173
+ H+ L L + L+LI + + G LF ++ + +I VG
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGE---LFTHLSQRERFTEHEVQIYVG 166
Query: 174 -TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
L +LHK II+RDIK NILL ++ ++DFGL+K + T + G
Sbjct: 167 EIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY-DFCG 222
Query: 233 TFGHLAPEYFMHGIV--DEKTDVFAFGVFLLEIISGRKP--VDGSHQSLHSWAKPILN 286
T ++AP+ G D+ D ++ GV + E+++G P VDG S ++ IL
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK 280
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKPTWRCFSFEEISIATNAFSSENLVGRGGYAEVY 83
NAA + G +ES++ + + + K W S + + + F +G G + V
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLK-KWE--SPAQNTAHLDQFERIKTLGTGSFGRVM 59
Query: 84 KGVLQD-GEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYL 140
++ G A+K L K K+ E L E + V P ++ L DN LY+
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 119
Query: 141 IFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
+ +++ G + S + + P + A YLH +I+RD+K
Sbjct: 120 VMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPE 171
Query: 198 NILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAF 256
N+++ +++DFG AK + + W + GT +LAPE + ++ D +A
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 257 GVFLLEIISGRKP 269
GV + E+ +G P
Sbjct: 226 GVLIYEMAAGYPP 238
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 143 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 65 TNAFSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
T+ + + +G G Y+ + + + E AVK + K D +E E L G H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQ-----H 75
Query: 124 PNVLSLLGCCVDNG--LYLIFQFSSRGSV------ASLFHDVNSPGVEWKVRHKIAVGTA 175
PN+++L D+G +Y++ + G + F + + V + +
Sbjct: 76 PNIITLKDV-YDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI--------T 126
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADF-EPQ---ISDFGLAKWLPSQWTHHSIAPIE 231
+ + YLH + ++HRD+K SNIL + P+ I DFG AK L ++ + P
Sbjct: 127 KTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE-NGLLMTPCY 182
Query: 232 GTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
T +APE D D+++ GV L +++G P
Sbjct: 183 -TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLT--KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLG 131
VG G +V K L G ++AVK L K+ + D K EI + HP+++ L
Sbjct: 26 VGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGK-IRREIQNLKLFRHPHIIKLYQ 83
Query: 132 CC-VDNGLYLIFQFSSRGSVASLFHDVNSPG-VEWKVRHKIAVGTARGLHYLHKGCQRRI 189
+ ++++ ++ S G LF + G ++ K ++ G+ Y H+ +
Sbjct: 84 VISTPSDIFMVMEYVSGGE---LFDYICKNGRLDEKESRRLFQQILSGVDYCHR---HMV 137
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPS-QWTHHSIAPIEGTFGHLAPEYFMHGI-V 247
+HRD+K N+LL A +I+DFGL+ + ++ S G+ + APE +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC----GSPNYAAPEVISGRLYA 193
Query: 248 DEKTDVFAFGVFLLEIISGRKPVDGSH 274
+ D+++ GV L ++ G P D H
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDH 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 65 TNAFSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCH 123
T+ + + +G G Y+ + + + E AVK + K D +E E L G H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQ-----H 75
Query: 124 PNVLSLLGCCVDNG--LYLIFQFSSRGSV------ASLFHDVNSPGVEWKVRHKIAVGTA 175
PN+++L D+G +Y++ + G + F + + V + +
Sbjct: 76 PNIITLKDV-YDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTI--------T 126
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADF-EPQ---ISDFGLAKWLPSQWTHHSIAPIE 231
+ + YLH + ++HRD+K SNIL + P+ I DFG AK L ++
Sbjct: 127 KTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYT 183
Query: 232 GTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
F +APE D D+++ GV L ++G P
Sbjct: 184 ANF--VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVK 62
Query: 76 RGGYAEVYKGVLQDGEEIA-VKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCV 134
Y + D +++ +K++ + + R ++ V P ++ L
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA----------VNFPFLVKLEFSFK 112
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ +++ G + S + + P + A YLH +I
Sbjct: 113 DNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 164
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+L+ +++DFG AK + + W + GT +LAPE + ++
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 218
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 20/189 (10%)
Query: 87 LQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYLIFQF 144
++ G A+K L K K+ E L E + V P ++ L DN LY++ ++
Sbjct: 49 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 108
Query: 145 SSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILL 201
G + S + + P + A YLH +I+RD+K N+L+
Sbjct: 109 VPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPENLLI 160
Query: 202 TADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFL 260
Q++DFG AK + + WT + GT +LAPE + ++ D +A GV +
Sbjct: 161 DQQGYIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEIILSKGYNKAVDWWALGVLI 214
Query: 261 LEIISGRKP 269
E+ +G P
Sbjct: 215 YEMAAGYPP 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P + L
Sbjct: 63 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 135 DN-GLYLIFQFSSRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ +++ G + S + + P + A YLH +I
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLI 164
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+++ +++DFG AK + + W + GT +LAPE + ++
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 218
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS-IAPIEGTF 234
RGL Y+H ++HRD+K SN+LL + +I DFGLA+ H + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVDGSH 274
+ APE ++ K+ D+++ G L E++S R G H
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 112 LTEIGTIGHVC-HPNVLSLLGCCVDNGLY-LIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
L E+ + V HPN++ L N + L+F +G + + + + K K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRK 128
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAP 229
I + LHK I+HRD+K NILL D +++DFG + L S+
Sbjct: 129 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC- 184
Query: 230 IEGTFGHLAPEYFMHGIVD------EKTDVFAFGVFLLEIISGRKP 269
GT +LAPE + D ++ D+++ GV + +++G P
Sbjct: 185 --GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 24 NAAVSPNGFTEESLENVVVACESETTKP-------TWRCFSFEEI-SIATNAFSSENLVG 75
NAA + G +ES++ + + + K T FE I ++ T +F LV
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 76 RGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCV 134
++ G A+K L K K+ E L E + V P + L
Sbjct: 63 H----------METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 135 DN-GLYLIFQFSSRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRII 190
DN LY++ +++ G + S + P + A YLH +I
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLI 164
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDE 249
+RD+K N+++ +++DFG AK + + W + GT +LAPE + ++
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNK 218
Query: 250 KTDVFAFGVFLLEIISGRKP 269
D +A GV + E+ +G P
Sbjct: 219 AVDWWALGVLIYEMAAGYPP 238
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 14/217 (6%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFL-TEIGT 117
++ + + ++GRG + EV + ++ A+K L+K R + F E
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 118 IGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR 176
+ P V+ L D+ LY++ ++ G + +L + + P +W + V A
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLA- 180
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L +H IHRD+K N+LL +++DFG + + + GT +
Sbjct: 181 -LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDY 235
Query: 237 LAPEYFM----HGIVDEKTDVFAFGVFLLEIISGRKP 269
++PE G + D ++ GVFL E++ G P
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 14/217 (6%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFL-TEIGT 117
++ + + ++GRG + EV + ++ A+K L+K R + F E
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 118 IGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR 176
+ P V+ L D+ LY++ ++ G + +L + + P +W + V A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLA- 185
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L +H IHRD+K N+LL +++DFG + + + GT +
Sbjct: 186 -LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDY 240
Query: 237 LAPEYFM----HGIVDEKTDVFAFGVFLLEIISGRKP 269
++PE G + D ++ GVFL E++ G P
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 112 LTEIGTIGHVC-HPNVLSLLGCCVDNGLY-LIFQFSSRGSVASLFHDVNSPGVEWKVRHK 169
L E+ + V HPN++ L N + L+F +G + + + + K K
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRK 115
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-PSQWTHHSIA 228
I + LHK I+HRD+K NILL D +++DFG + L P + +
Sbjct: 116 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----KLR 168
Query: 229 PIEGTFGHLAPEYFMHGIVD------EKTDVFAFGVFLLEIISGRKP 269
+ GT +LAPE + D ++ D+++ GV + +++G P
Sbjct: 169 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 14/217 (6%)
Query: 60 EISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFL-TEIGT 117
++ + + ++GRG + EV + ++ A+K L+K R + F E
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 118 IGHVCHPNVLSLLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR 176
+ P V+ L D+ LY++ ++ G + +L + + P +W + V A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLA- 185
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L +H IHRD+K N+LL +++DFG + + + GT +
Sbjct: 186 -LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDY 240
Query: 237 LAPEYFM----HGIVDEKTDVFAFGVFLLEIISGRKP 269
++PE G + D ++ GVFL E++ G P
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 68 FSSENLVGRGGYAEVYKGVLQDGEE-IAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
+ ++L+GRG Y VY ++ + +A+K++ ++ D K L EI + + +
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 127 LSLLGCCVD------NGLYLIFQFSSRGSVASLFHDVNSP--GVEWKVRHKIAVGTARGL 178
+ L + + LY++ + + + LF +P E V+ I G
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIAD-SDLKKLF---KTPIFLTEQHVK-TILYNLLLGE 144
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSI 227
++H+ IIHRD+K +N LL D +I DFGLA+ + S H +
Sbjct: 145 KFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIV 190
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 123 HPNVLSLLGCCVDNGLY-LIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYL 181
HPN++ L N + L+F +G + + + + K KI + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICAL 140
Query: 182 HKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWL-PSQWTHHSIAPIEGTFGHLAPE 240
HK I+HRD+K NILL D +++DFG + L P + + + GT +LAPE
Sbjct: 141 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAPE 193
Query: 241 YFMHGIVD------EKTDVFAFGVFLLEIISGRKP 269
+ D ++ D+++ GV + +++G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Query: 16 KRRSFDGDNAA--VSPNGFTEESLENVVVACESETTKPTWRCFSFEEISI----ATNAFS 69
+RR +D D V G + +N V W+ + + + I + +
Sbjct: 109 RRRGYDVDEQGKIVRGKGTVSSNYDNYVFDI--------WKQYYPQPVEIKHDHVLDHYD 160
Query: 70 SENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFL-TEIGTIGHVCHPNVL 127
+G G + V++ + G A K V+T +KE + EI T+ + HP ++
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKF---VMTPHESDKETVRKEIQTMSVLRHPTLV 217
Query: 128 SLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR----GLHYLH 182
+L D N + +I++F S G + D ++ K+ AV R GL ++H
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMH 272
Query: 183 KGCQRRIIHRDIKSSNILLTA--DFEPQISDFGLAKWL-PSQWTHHSIAPIEGTFGHLAP 239
+ +H D+K NI+ T E ++ DFGL L P Q S+ GT AP
Sbjct: 273 ---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAP 325
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSH 274
E V TD+++ GV ++SG P G +
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Query: 16 KRRSFDGDNAA--VSPNGFTEESLENVVVACESETTKPTWRCFSFEEISI----ATNAFS 69
+RR +D D V G + +N V W+ + + + I + +
Sbjct: 3 RRRGYDVDEQGKIVRGKGTVSSNYDNYVFDI--------WKQYYPQPVEIKHDHVLDHYD 54
Query: 70 SENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFL-TEIGTIGHVCHPNVL 127
+G G + V++ + G A K V+T +KE + EI T+ + HP ++
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNFAAKF---VMTPHESDKETVRKEIQTMSVLRHPTLV 111
Query: 128 SLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR----GLHYLH 182
+L D N + +I++F S G + D ++ K+ AV R GL ++H
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMH 166
Query: 183 KGCQRRIIHRDIKSSNILLTADF--EPQISDFGLAKWL-PSQWTHHSIAPIEGTFGHLAP 239
+ +H D+K NI+ T E ++ DFGL L P Q S+ GT AP
Sbjct: 167 ---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAP 219
Query: 240 EYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSH 274
E V TD+++ GV ++SG P G +
Sbjct: 220 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 254
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 189 IIHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
++HRD+K N+L T + E +I DFG A+ P + + T + APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPLKTPCFTLHYAAPELLNQN 184
Query: 246 IVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
DE D+++ GV L ++SG+ P +SL
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSL 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 64 ATNAF---SSENLVGRGGYAEVYKGVLQDGEEIA--VKRLTKVV-TDDRKEKEFL-TEIG 116
A N+F S ++G G + +V+K EE A +K K++ T K+KE + EI
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKC-----EETATGLKLAAKIIKTRGMKDKEEVKNEIS 138
Query: 117 TIGHVCHPNVLSLLGCC-VDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA 175
+ + H N++ L N + L+ ++ G + D + E +
Sbjct: 139 VMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK-QIC 197
Query: 176 RGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQIS--DFGLAK-WLPSQWTHHSIAPIEG 232
G+ ++H Q I+H D+K NIL QI DFGLA+ + P + + G
Sbjct: 198 EGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF----G 250
Query: 233 TFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
T LAPE + V TD+++ GV ++SG P G + +
Sbjct: 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA 294
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 15/195 (7%)
Query: 81 EVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDNGL-- 138
E++KG Q G +I VK L RK ++F E + HPNVL +LG C
Sbjct: 25 ELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 139 -YLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
LI + GS+ ++ H+ + V+ K A+ ARG +LH + I + S
Sbjct: 84 PTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSR 142
Query: 198 NILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVD---EKTDVF 254
++ + D +IS + Q AP +APE D D +
Sbjct: 143 SVXIDEDXTARISXADVK--FSFQSPGRXYAP-----AWVAPEALQKKPEDTNRRSADXW 195
Query: 255 AFGVFLLEIISGRKP 269
+F V L E+++ P
Sbjct: 196 SFAVLLWELVTREVP 210
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 68 FSSENLVGRGGYAEVYKGVLQ-DGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
+ +L+G G Y V + + + +A+K++ +V D K L EI + + H +V
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 127 LSLLGCCVD------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK-IAVGTARGLH 179
+ +L + + LY++ + + LF +P ++ K + G+
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLF---RTPVYLTELHIKTLLYNLLVGVK 170
Query: 180 YLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
Y+H I+HRD+K +N L+ D ++ DFGLA+ + +S PI
Sbjct: 171 YVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPI 218
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 191 HRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHL---APEYFMHGIV 247
HRD+K NIL++AD + DFG+A S T + + T G L APE F
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA----SATTDEKLTQLGNTVGTLYYXAPERFSESHA 212
Query: 248 DEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ D++A L E ++G P G S+
Sbjct: 213 TYRADIYALTCVLYECLTGSPPYQGDQLSV 242
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 119/298 (39%), Gaps = 49/298 (16%)
Query: 66 NAFSSENLVGRGGYAEV-YKGVLQDGEEIAVKRLTKVVTD-DRKEKEFLTEIGTIGHVCH 123
N SE ++G G V ++G Q G +AVKR+ D E + LTE H
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDD-----H 68
Query: 124 PNVLSLLGC-CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK-----IAVGTARG 177
PNV+ D LY+ + + ++ L N K++ + + A G
Sbjct: 69 PNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 178 LHYLHKGCQRRIIHRDIKSSNILL------TAD-------FEPQISDFGLAKWLPSQWT- 223
+ +LH +IIHRD+K NIL+ TAD ISDFGL K L S +
Sbjct: 128 VAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 224 -HHSIAPIEGTFGHLAPEYFMHG-------IVDEKTDVFAFGVFLLEIIS-GRKPVDGSH 274
++ GT G APE + D+F+ G I+S G+ P +
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 275 QSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ + I + E++ L D L + T L S I P RPT +VL
Sbjct: 245 SRESNIIRGIFSLDEMKCLHDRSLIA--EATDL------ISQMIDHDPLKRPTAMKVL 294
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 23/224 (10%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGT 117
+E+ + F ++GRG + EV +++ E I A+K L K R E E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 118 IGHVCHPNVLSLLGCCV--DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI----- 170
+ ++ L +N LYL+ + G + +L E R I
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+ + LHY +HRDIK N+LL + +++DFG + T S +
Sbjct: 187 AIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 231 EGTFGHLAPEYFM-----HGIVDEKTDVFAFGVFLLEIISGRKP 269
GT +++PE G + D ++ GV + E++ G P
Sbjct: 238 -GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 118/298 (39%), Gaps = 49/298 (16%)
Query: 66 NAFSSENLVGRGGYAEV-YKGVLQDGEEIAVKRLTKVVTD-DRKEKEFLTEIGTIGHVCH 123
N SE ++G G V ++G Q G +AVKR+ D E + LTE H
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDD-----H 68
Query: 124 PNVLSLLGC-CVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHK-----IAVGTARG 177
PNV+ D LY+ + + ++ L N K++ + + A G
Sbjct: 69 PNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 178 LHYLHKGCQRRIIHRDIKSSNILL------TAD-------FEPQISDFGLAKWLPSQWT- 223
+ +LH +IIHRD+K NIL+ TAD ISDFGL K L S
Sbjct: 128 VAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 224 -HHSIAPIEGTFGHLAPEYFMHG-------IVDEKTDVFAFGVFLLEIIS-GRKPVDGSH 274
++ GT G APE + D+F+ G I+S G+ P +
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 275 QSLHSWAKPILNQGEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ + I + E++ L D L + T L S I P RPT +VL
Sbjct: 245 SRESNIIRGIFSLDEMKCLHDRSLIA--EATDL------ISQMIDHDPLKRPTAMKVL 294
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 20/188 (10%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYLIFQFS 145
+ G A+K L K K+ E L E + V P ++ L DN LY++ ++
Sbjct: 51 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 110
Query: 146 SRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLT 202
+ G + S + + P + A YLH +I+RD+K N+L+
Sbjct: 111 AGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPENLLID 162
Query: 203 ADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
Q++DFG AK + + W + GT +LAPE + ++ D +A GV +
Sbjct: 163 EQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 216
Query: 262 EIISGRKP 269
E+ +G P
Sbjct: 217 EMAAGYPP 224
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 38/218 (17%)
Query: 62 SIATNAFSSENLVGRGGYAEVYK-GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGH 120
S +F + +G G Y EV+K +DG AVKR + L E+G+
Sbjct: 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEK 112
Query: 121 VC-HPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVG------ 173
V HP CCV + Q G + L ++ P ++ +H A G
Sbjct: 113 VGQHP-------CCVR-----LEQAWEEGGILYLQTELCGPSLQ---QHCEAWGASLPEA 157
Query: 174 --------TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHH 225
T L +LH + ++H D+K +NI L ++ DFGL L T
Sbjct: 158 QVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL---GTAG 211
Query: 226 SIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEI 263
+ EG ++APE + G DVF+ G+ +LE+
Sbjct: 212 AGEVQEGDPRYMAPE-LLQGSYGTAADVFSLGLTILEV 248
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 23/224 (10%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGT 117
+E+ + F ++GRG + EV +++ E I A+K L K R E E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 118 IGHVCHPNVLSLLGCCV--DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKI----- 170
+ ++ L +N LYL+ + G + +L E R I
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
A+ + LHY +HRDIK N+LL + +++DFG + T S +
Sbjct: 203 AIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 231 EGTFGHLAPEYFM-----HGIVDEKTDVFAFGVFLLEIISGRKP 269
GT +++PE G + D ++ GV + E++ G P
Sbjct: 254 -GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYLIFQFS 145
+ G A+K L K K+ E L E + V P ++ L DN LY++ ++
Sbjct: 59 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 118
Query: 146 SRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLT 202
+ G + S + P + A YLH +I+RD+K N+L+
Sbjct: 119 AGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPENLLID 170
Query: 203 ADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
Q++DFG AK + + W + GT +LAPE + ++ D +A GV +
Sbjct: 171 QQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 224
Query: 262 EIISGRKP 269
E+ +G P
Sbjct: 225 EMAAGYPP 232
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 73 LVGRGGYAEVY--KGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
++G G ++EV+ K L G+ A+K + K + ++ EI + + H N+++L
Sbjct: 16 VLGSGAFSEVFLVKQRLT-GKLFALKCIKK--SPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 131 GCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RGLHYLHKGCQRR 188
YL+ Q S G LF + GV + + + + YLH +
Sbjct: 73 DIYESTTHYYLVMQLVSGGE---LFDRILERGVYTEKDASLVIQQVLSAVKYLH---ENG 126
Query: 189 IIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHG 245
I+HRD+K N+L E I+DFGL+K + ++ GT G++APE
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSK----MEQNGIMSTACGTPGYVAPEVLAQK 182
Query: 246 IVDEKTDVFAFGVFLLEIISGRKP 269
+ D ++ GV ++ G P
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYLIFQFS 145
+ G A+K L K K+ E L E + V P ++ L DN LY++ ++
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 146 SRGSVASLFHDV---NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLT 202
G + S + + P + A YLH +I+RD+K N+L+
Sbjct: 117 PGGEMFSHLRRIGRFSEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPENLLID 168
Query: 203 ADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
Q++DFG AK + + W + GT +LAPE + ++ D +A GV +
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 222
Query: 262 EIISGRKP 269
E+ +G P
Sbjct: 223 EMAAGYPP 230
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 51/238 (21%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIG 116
FEEI++ +G+G + +V K D A+K K+ + K L+E+
Sbjct: 8 FEEIAV----------LGQGAFGQVVKARNALDSRYYAIK---KIRHTEEKLSTILSEVM 54
Query: 117 TIGHVCHPNVLSLLGCCVD--------------NGLYLIFQFSSRGSVASLFH--DVNSP 160
+ + H V+ ++ + L++ ++ G++ L H ++N
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114
Query: 161 GVE-WKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--- 216
E W++ +I L Y+H + IIHRD+K NI + +I DFGLAK
Sbjct: 115 RDEYWRLFRQIL----EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 217 ------WLPSQ---WTHHSIAPIEGTFGHLAPEYF-MHGIVDEKTDVFAFGVFLLEII 264
L SQ + ++ GT ++A E G +EK D+++ G+ E+I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 20/188 (10%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEF-LTEIGTIGHVCHPNVLSLLGCCVDN-GLYLIFQFS 145
+ G A+K L K K+ E L E + V P ++ L DN LY++ ++
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 146 SRGSVASLFHDVN---SPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLT 202
G + S + P + A YLH +I+RD+K N+L+
Sbjct: 117 PGGEMFSHLRRIGRFXEPHARF-----YAAQIVLTFEYLH---SLDLIYRDLKPENLLID 168
Query: 203 ADFEPQISDFGLAKWLPSQ-WTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLL 261
Q++DFG AK + + W + GT +LAPE + ++ D +A GV +
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 222
Query: 262 EIISGRKP 269
E+ +G P
Sbjct: 223 EMAAGYPP 230
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLTKV-VTDDRK---EKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K + G+E A K + K ++ R+ +E E+ + + HPN+++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + S G + + S + + + G+HYLH +
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLH---SK 134
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
RI H D+K NI+L P ++ DFG+A + + + I GT +APE
Sbjct: 135 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG---NEFKNIFGTPEFVAPEIVN 191
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLTKV-VTDDRK---EKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K + G+E A K + K ++ R+ +E E+ + + HPN+++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + S G + + S + + + G+HYLH +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLH---SK 127
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
RI H D+K NI+L P ++ DFG+A + + + I GT +APE
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG---NEFKNIFGTPEFVAPEIVN 184
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLG 213
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKW------------ 217
I + A + +LH + ++HRD+K SNI T D ++ DFGL
Sbjct: 169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 218 -LPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEII 264
+P+ TH GT +++PE K D+F+ G+ L E++
Sbjct: 226 PMPAYATHXGQV---GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 73 LVGRGGYAEVYKGVLQD-GEEIAVK--RLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLS 128
++G+G ++ V + + ++ G++ AVK + K + E L +I H+ HP+++
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 129 LLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR----GLHYLHK 183
LL +G LY++F+F + F V + +A R L Y H
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLC--FEIVKRADAGFVYSEAVASHYMRQILEALRYCH- 149
Query: 184 GCQRRIIHRDIKSSNILLTA--DFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPE 240
IIHRD+K +LL + + P ++ FG+A L GT +APE
Sbjct: 150 --DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPE 205
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ DV+ GV L ++SG P G+ + L
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 242
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVDN-GLYLIFQFSS 146
QD +AVK L + R++ + E+ T+ + H +++ G C + L ++F++
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTM--LQHQHIVRFFGVCTEGRPLLMVFEYMR 126
Query: 147 RGSVASLFH-------------DVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRD 193
G + DV + +A A G+ YL +HRD
Sbjct: 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRD 183
Query: 194 IKSSNILLTADFEPQISDFGLAKWLPSQWTH----HSIAPIEGTFGHLAPEYFMHGIVDE 249
+ + N L+ +I DFG+++ + S + ++ PI + PE ++
Sbjct: 184 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR----WMPPESILYRKFTT 239
Query: 250 KTDVFAFGVFLLEIIS-GRKP 269
++DV++FGV L EI + G++P
Sbjct: 240 ESDVWSFGVVLWEIFTYGKQP 260
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 26/217 (11%)
Query: 74 VGRGGYAEVYKGVL------QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + +V+ QD +AVK L + R++ + E+ T+ + H +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM--LQHQHIV 77
Query: 128 SLLGCCVDN-GLYLIFQFSSRGSVASLFH-------------DVNSPGVEWKVRHKIAVG 173
G C + L ++F++ G + DV + +A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT 233
A G+ YL +HRD+ + N L+ +I DFG+++ + S +
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 234 FGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ PE ++ ++DV++FGV L EI + G++P
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 73 LVGRGGYAEVYKGVLQD-GEEIAVK--RLTKVVTDDRKEKEFLTEIGTIGHVC-HPNVLS 128
++G+G ++ V + + ++ G++ AVK + K + E L +I H+ HP+++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 129 LLGCCVDNG-LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTAR----GLHYLHK 183
LL +G LY++F+F + F V + +A R L Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLC--FEIVKRADAGFVYSEAVASHYMRQILEALRYCH- 147
Query: 184 GCQRRIIHRDIKSSNILLTA--DFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPE 240
IIHRD+K +LL + + P ++ FG+A L GT +APE
Sbjct: 148 --DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPE 203
Query: 241 YFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSL 277
+ DV+ GV L ++SG P G+ + L
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 240
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 26/217 (11%)
Query: 74 VGRGGYAEVYKGVL------QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVL 127
+G G + +V+ QD +AVK L + R++ + E+ T+ + H +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM--LQHQHIV 83
Query: 128 SLLGCCVD-NGLYLIFQFSSRGSVASLFH-------------DVNSPGVEWKVRHKIAVG 173
G C + L ++F++ G + DV + +A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 174 TARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGT 233
A G+ YL +HRD+ + N L+ +I DFG+++ + S +
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 234 FGHLAPEYFMHGIVDEKTDVFAFGVFLLEIIS-GRKP 269
+ PE ++ ++DV++FGV L EI + G++P
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 99/238 (41%), Gaps = 43/238 (18%)
Query: 71 ENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDR----KEKEFLTEIGTIGHVCHPN 125
E+++G G +A V + L +E AVK + K R +E E L + H N
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG-----HRN 72
Query: 126 VLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRH-------KIAVGTARG 177
VL L+ + + YL+F+ GS+ S H K RH + A
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIH---------KRRHFNELEASVVVQDVASA 123
Query: 178 LHYLHKGCQRRIIHRDIKSSNILL--TADFEP-QISDFGLAKWLPSQWTHHSIAPIE--- 231
L +LH + I HRD+K NIL P +I DFGL + I+ E
Sbjct: 124 LDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT 180
Query: 232 --GTFGHLAPEYFMH-----GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAK 282
G+ ++APE I D++ D+++ GV L ++SG P G S W +
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR 238
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 58/276 (21%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGV--LQDG--EEIAVKRLTKVVTDDR--KEKEF 111
+E + +N F E+ +G G ++ VY LQ G E+IA+K L R E +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 112 LTEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHD-----VNSPGVEWKV 166
LT G NV+ + C N +I ++ L H+ +NS + ++
Sbjct: 73 LTVAGG-----QDNVMGVKYCFRKNDHVVI-------AMPYLEHESFLDILNS--LSFQE 118
Query: 167 RHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLA---------- 215
+ + + L +H Q I+HRD+K SN L + + DFGLA
Sbjct: 119 VREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIEL 175
Query: 216 -KWLPSQWTH---------------HSIAPIEGTFGHLAPEYFMHGIVDEKT--DVFAFG 257
K++ S+ +AP GT G APE + ++ T D+++ G
Sbjct: 176 LKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPE-VLTKCPNQTTAIDMWSAG 234
Query: 258 VFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKL 293
V L ++SGR P + L + A+ + +G E +
Sbjct: 235 VIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETI 270
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLT--KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + +V G Q G ++AVK L K+ + D K EI + HP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK-IKREIQNLKLFRHPHIIKLY 77
Query: 131 GCC-VDNGLYLIFQFSSRGSVASLFHDVNSPG-VEWKVRHKIAVGTARGLHYLHKGCQRR 188
+++ ++ S G LF + G VE ++ + Y H+
Sbjct: 78 QVISTPTDFFMVMEYVSGGE---LFDYICKHGRVEEMEARRLFQQILSAVDYCHR---HM 131
Query: 189 IIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPEYFMHGI- 246
++HRD+K N+LL A +I+DFGL+ + ++ S G+ + APE +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC----GSPNYAAPEVISGRLY 187
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSH 274
+ D+++ GV L ++ G P D H
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLTKV-VTDDRK---EKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K + G+E A K + K + R+ +E E+ + + HPN+++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + S G + + S + + + G+HYLH +
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLH---SK 148
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
RI H D+K NI+L P ++ DFG+A + + + I GT +APE
Sbjct: 149 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG---NEFKNIFGTPEFVAPEIVN 205
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASPFLG 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
VGRG Y VYK +DG++ L K + EI + + HPNV+SL
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYAL-KQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 134 V---DNGLYLIFQFSSRGSVASL-FH---DVNSPGVEWK--VRHKIAVGTARGLHYLHKG 184
+ D ++L+F ++ + FH N V+ + + G+HYLH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 185 CQRRIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHS-IAPIEGTFGHLAP 239
++HRD+K +NIL+ + +I+D G A+ S + + P+ TF + AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 240 EYFMHGIVDEKT-DVFAFGVFLLEIIS 265
E + K D++A G E+++
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 74 VGRGGYAEVYKGVLQ-DGEEIAVKRLT--KVVTDDRKEKEFLTEIGTIGHVCHPNVLSLL 130
+G G + +V G Q G ++AVK L K+ + D K EI + HP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK-IKREIQNLKLFRHPHIIKLY 77
Query: 131 GCC-VDNGLYLIFQFSSRGSVASLFHDVNSPG-VEWKVRHKIAVGTARGLHYLHKGCQRR 188
+++ ++ S G LF + G VE ++ + Y H+
Sbjct: 78 QVISTPTDFFMVMEYVSGGE---LFDYICKHGRVEEMEARRLFQQILSAVDYCHR---HM 131
Query: 189 IIHRDIKSSNILLTADFEPQISDFGLAKWLP-SQWTHHSIAPIEGTFGHLAPEYFMHGI- 246
++HRD+K N+LL A +I+DFGL+ + ++ S G+ + APE +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC----GSPNYAAPEVISGRLY 187
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSH 274
+ D+++ GV L ++ G P D H
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 107 KEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASL-----FHDVN-S 159
K +F E+ I + + L+ G + + +Y+I+++ S+ D N +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 160 PGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLP 219
+ +V I Y+H ++ I HRD+K SNIL+ + ++SDFG ++++
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 220 SQWTHHSIAPIEGTFGHLAPEYFMH--GIVDEKTDVFAFGVFL 260
+ I GT+ + PE+F + K D+++ G+ L
Sbjct: 204 DK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEPQ----ISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P+ I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPAFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPE 144
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 145 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 201 WSLGVIMYILLCGYPPFYSNH 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPE 144
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 145 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 201 WSLGVIMYILLCGYPPFYSNH 221
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 152
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 153 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 208
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 209 WSLGVIMYILLCGYPPFYSNH 229
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 145
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 146 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 201
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 202 WSLGVIMYILLCGYPPFYSNH 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 151
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 152 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 207
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 208 WSLGVIMYILLCGYPPFYSNH 228
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 150
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 151 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 206
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 207 WSLGVIMYILLCGYPPFYSNH 227
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 190
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 191 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 246
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 247 WSLGVIMYILLCGYPPFYSNH 267
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 72 NLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTD-----DRKEKEFLTEIGTIGHVCHPNV 126
+L+G G Y +V K VL D E + + + + E EI + + H NV
Sbjct: 11 DLLGEGSYGKV-KEVL-DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 127 LSLLGCCVD---NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHK 183
+ L+ + +Y++ ++ G + + V H GL YLH
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH- 126
Query: 184 GCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYF- 242
+ I+H+DIK N+LLT +IS G+A+ L + +G+ PE
Sbjct: 127 --SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN 184
Query: 243 -MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSH 274
+ K D+++ GV L I +G P +G +
Sbjct: 185 GLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 147 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 202
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 203 WSLGVIMYILLCGYPPFYSNH 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 32/216 (14%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
A+++ ++G G + V++ L + +E+A+K KV+ D R + E+ + V HPNV
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIK---KVLQDKRFKNR---ELQIMRIVKHPNV 94
Query: 127 LSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV-GTARGL 178
+ L NG L L+ ++ + H + K+ + R L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEP-----QISDFGLAKWLPSQWTHHSIAPIEGT 233
Y+H I HRDIK N+LL +P ++ DFG AK L + +++ I
Sbjct: 155 AYIHSIG---ICHRDIKPQNLLL----DPPSGVLKLIDFGSAKILIA--GEPNVSXICSR 205
Query: 234 FGHLAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
+ + APE + G + T D+++ G + E++ G+
Sbjct: 206 Y-YRAPE-LIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPE 160
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 161 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 216
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 217 WSLGVIMYILLCGYPPFYSNH 237
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 196
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 197 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 252
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 253 WSLGVIMYILLCGYPPFYSNH 273
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 198 NILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDV 253
N+L T+ P +++DFG AK S H+S+ T ++APE D+ D+
Sbjct: 147 NLLYTSK-RPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 202
Query: 254 FAFGVFLLEIISGRKPVDGSH 274
++ GV + ++ G P +H
Sbjct: 203 WSLGVIMYILLCGYPPFYSNH 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGT 233
+ YLH + IIHRD+K N+LL++ E +I+DFG +K L ++ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 179
Query: 234 FGHLAPEYFMH---GIVDEKTDVFAFGVFLLEIISGRKP 269
+LAPE + + D ++ GV L +SG P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGT 233
+ YLH + IIHRD+K N+LL++ E +I+DFG +K L ++ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 179
Query: 234 FGHLAPEYFMH---GIVDEKTDVFAFGVFLLEIISGRKP 269
+LAPE + + D ++ GV L +SG P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGT 233
+ YLH + IIHRD+K N+LL++ E +I+DFG +K L ++ GT
Sbjct: 125 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 178
Query: 234 FGHLAPEYFMH---GIVDEKTDVFAFGVFLLEIISGRKP 269
+LAPE + + D ++ GV L +SG P
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGT 233
+ YLH + IIHRD+K N+LL++ E +I+DFG +K L ++ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 179
Query: 234 FGHLAPEYFMH---GIVDEKTDVFAFGVFLLEIISGRKP 269
+LAPE + + D ++ GV L +SG P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIAPIEGT 233
+ YLH + IIHRD+K N+LL++ E +I+DFG +K L ++ GT
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 185
Query: 234 FGHLAPEYFMH---GIVDEKTDVFAFGVFLLEIISGRKP 269
+LAPE + + D ++ GV L +SG P
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 113 TEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV 172
TEI + + HP ++ + Y++ + G LF V + K+
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGE---LFDKVVGNKRLKEATCKLYF 245
Query: 173 -GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIA 228
+ YLH + IIHRD+K N+LL++ E +I+DFG +K L ++
Sbjct: 246 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302
Query: 229 PIEGTFGHLAPEYFMH---GIVDEKTDVFAFGVFLLEIISGRKP 269
GT +LAPE + + D ++ GV L +SG P
Sbjct: 303 ---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 51/238 (21%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIG 116
FEEI++ +G+G + +V K D A+K K+ + K L+E+
Sbjct: 8 FEEIAV----------LGQGAFGQVVKARNALDSRYYAIK---KIRHTEEKLSTILSEVM 54
Query: 117 TIGHVCHPNVLSLLGCCVD--------------NGLYLIFQFSSRGSVASLFH--DVNSP 160
+ + H V+ ++ + L++ ++ ++ L H ++N
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ 114
Query: 161 GVE-WKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--- 216
E W++ +I L Y+H + IIHRD+K NI + +I DFGLAK
Sbjct: 115 RDEYWRLFRQIL----EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 217 ------WLPSQ---WTHHSIAPIEGTFGHLAPEYF-MHGIVDEKTDVFAFGVFLLEII 264
L SQ + ++ GT ++A E G +EK D+++ G+ E+I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 132
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 189
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFLG 218
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 132
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 189
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFLG 218
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 113 TEIGTIGHVCHPNVLSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAV 172
TEI + + HP ++ + Y++ + G LF V + K+
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGE---LFDKVVGNKRLKEATCKLYF 259
Query: 173 -GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEP---QISDFGLAKWLPSQWTHHSIA 228
+ YLH + IIHRD+K N+LL++ E +I+DFG +K L ++
Sbjct: 260 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 316
Query: 229 PIEGTFGHLAPEYFMH---GIVDEKTDVFAFGVFLLEIISGRKP 269
GT +LAPE + + D ++ GV L +SG P
Sbjct: 317 ---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 13/169 (7%)
Query: 109 KEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+E E+ + V HPN+++L + + LI + S G + S E
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT- 118
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWT 223
G++YLH ++I H D+K NI+L P ++ DFGLA +
Sbjct: 119 -SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+I GT +APE + + + D+++ GV ++SG P G
Sbjct: 175 FKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTAD--FEPQISDFGLAK--WLPSQWTHHSIAPIEG 232
LHYLH + I HRDIK N L + + FE ++ DFGL+K + + ++ + G
Sbjct: 180 ALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 233 TFGHLAPEYF--MHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
T +APE + K D ++ GV L ++ G P G
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPG 278
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 33/232 (14%)
Query: 68 FSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRK--EKEFLTEIGTIGHVCHP 124
F ++L+G G Y V + GE +A+K++ D+ L EI + H H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHE 69
Query: 125 NVLSLLGCCVD------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGL 178
N++++ N +Y+I + L +++ + T R +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS--------IAPI 230
LH +IHRD+K SN+L+ ++ + ++ DFGLA+ + +S +
Sbjct: 126 KVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 231 EGTFGHLAPEYFM-HGIVDEKTDVFAFGVFLLEIISGRKPV----DGSHQSL 277
T + APE + DV++ G L E+ R+P+ D HQ L
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLL 233
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 19/224 (8%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEV-YKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIG 116
+E+ + + F ++GRG ++EV + Q G+ A+K + K R E E
Sbjct: 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREER 112
Query: 117 TIGHVCHPNVLSLLGCCV--DNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIA--V 172
+ ++ L +N LYL+ ++ G + +L R +A V
Sbjct: 113 DVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIV 172
Query: 173 GTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEG 232
+H L +HRDIK NILL +++DFG L + T S+ + G
Sbjct: 173 MAIDSVHRLG------YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-G 225
Query: 233 TFGHLAPEYFM-------HGIVDEKTDVFAFGVFLLEIISGRKP 269
T +L+PE G + D +A GVF E+ G+ P
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 98/238 (41%), Gaps = 43/238 (18%)
Query: 71 ENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDR----KEKEFLTEIGTIGHVCHPN 125
E+++G G +A V + L +E AVK + K R +E E L + H N
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG-----HRN 72
Query: 126 VLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRH-------KIAVGTARG 177
VL L+ + + YL+F+ GS+ S H K RH + A
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIH---------KRRHFNELEASVVVQDVASA 123
Query: 178 LHYLHKGCQRRIIHRDIKSSNILL--TADFEP-QISDFGLAKWLPSQWTHHSIAPIE--- 231
L +LH + I HRD+K NIL P +I DF L + I+ E
Sbjct: 124 LDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180
Query: 232 --GTFGHLAPEYFMH-----GIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAK 282
G+ ++APE I D++ D+++ GV L ++SG P G S W +
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR 238
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHV-CHPNVLSLLG 131
+GRG Y+EV++ + + + E++ VK L V K+ + EI + ++ PN+++L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPV-----KKNKIKREIKILENLRGGPNIITLAD 99
Query: 132 CCVD---NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRR 188
D L+F+ + L+ + + + + + L Y H
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYM-----YEILKALDYCHSMG--- 151
Query: 189 IIHRDIKSSNILLTADFEP-QISDFGLAKWL-PSQWTHHSIAPIEGTFGHLAPEYFMHGI 246
I+HRD+K N+++ + ++ D+GLA++ P Q + +A L +Y M+
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY-- 209
Query: 247 VDEKTDVFAFGVFLLEIISGRKPVDGSHQS 276
D D+++ G L +I ++P H +
Sbjct: 210 -DYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 33/232 (14%)
Query: 68 FSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRK--EKEFLTEIGTIGHVCHP 124
F ++L+G G Y V + GE +A+K++ D+ L EI + H H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHE 69
Query: 125 NVLSLLGCCVD------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGL 178
N++++ N +Y+I + L +++ + T R +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS--------IAPI 230
LH +IHRD+K SN+L+ ++ + ++ DFGLA+ + +S +
Sbjct: 126 KVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 231 EGTFGHLAPEYFM-HGIVDEKTDVFAFGVFLLEIISGRKPV----DGSHQSL 277
T + APE + DV++ G L E+ R+P+ D HQ L
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLL 233
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 33/232 (14%)
Query: 68 FSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRK--EKEFLTEIGTIGHVCHP 124
F ++L+G G Y V + GE +A+K++ D+ L EI + H H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHE 69
Query: 125 NVLSLLGCCVD------NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGL 178
N++++ N +Y+I + L +++ + T R +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 179 HYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHS--------IAPI 230
LH +IHRD+K SN+L+ ++ + ++ DFGLA+ + +S +
Sbjct: 126 KVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 231 EGTFGHLAPEYFM-HGIVDEKTDVFAFGVFLLEIISGRKPV----DGSHQSL 277
T + APE + DV++ G L E+ R+P+ D HQ L
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLL 233
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 113 TEIGTIGHVCHPNVLSLLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIA 171
EI + + HP +++L D + LI +F S G LF + + ++K+
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE---LFDRIAAE--DYKMSEAEV 151
Query: 172 VGTAR----GLHYLHKGCQRRIIHRDIKSSNILLTADFEP--QISDFGLAKWL-PSQWTH 224
+ R GL ++H + I+H DIK NI+ +I DFGLA L P +
Sbjct: 152 INYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208
Query: 225 HSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ A E APE V TD++A GV ++SG P G
Sbjct: 209 VTTATAEFA----APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 136 NGLYLIFQFSSRG-SVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDI 194
NG++++ F G ++ +L G+ +I+ GL Y+H+ C IIH DI
Sbjct: 101 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDI 158
Query: 195 KSSNILLTADFEPQ------ISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVD 248
K N+L+ P+ I+D G A W +T +SI E + +PE +
Sbjct: 159 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT-NSIQTRE----YRSPEVLLGAPWG 213
Query: 249 EKTDVFAFGVFLLEIISG 266
D+++ + E+I+G
Sbjct: 214 CGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 136 NGLYLIFQFSSRG-SVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDI 194
NG++++ F G ++ +L G+ +I+ GL Y+H+ C IIH DI
Sbjct: 101 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDI 158
Query: 195 KSSNILLTADFEPQ------ISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVD 248
K N+L+ P+ I+D G A W +T +SI E + +PE +
Sbjct: 159 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT-NSIQTRE----YRSPEVLLGAPWG 213
Query: 249 EKTDVFAFGVFLLEIISG 266
D+++ + E+I+G
Sbjct: 214 CGADIWSTACLIFELITG 231
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 109/275 (39%), Gaps = 45/275 (16%)
Query: 74 VGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCC 133
+GRG + V++ V ++ + + KV D+ + EI + H N+L L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK--KEISILNIARHRNILHLHESF 70
Query: 134 VD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQ------ 186
L +IF+F S +F +N+ E R ++ Y+H+ C+
Sbjct: 71 ESMEELVMIFEFISG---LDIFERINTSAFELNEREIVS--------YVHQVCEALQFLH 119
Query: 187 -RRIIHRDIKSSNILLTADFEP--QISDFGLAKWLP--SQWTHHSIAPIEGTFGHLAPEY 241
I H DI+ NI+ +I +FG A+ L + AP + APE
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP-----EYYAPEV 174
Query: 242 FMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWAKPILNQGEIEKLVDPRL--- 298
H +V TD+++ G + ++SG P NQ IE +++
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAE-----------TNQQIIENIMNAEYTFD 223
Query: 299 QGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVLE 333
+ A+ + + F L ++ + R T SE L+
Sbjct: 224 EEAFKEISIEAMDFVDRLLVKERKS-RMTASEALQ 257
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K LQ + KR TK ++ E+ + + HPNV++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 129 LLGCCVDN-GLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + + G + + S E + G++YLH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH---SL 133
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P +I DFGLA + + I GT +APE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVN 190
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 9/140 (6%)
Query: 138 LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSS 197
L ++ + G + S D + +I + YLH I HRD+K
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI---NIAHRDVKPE 190
Query: 198 NILLTADFEPQI---SDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKTDVF 254
N+L T+ I +DFG AK S H+S+ T ++APE D+ D +
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDXW 247
Query: 255 AFGVFLLEIISGRKPVDGSH 274
+ GV ++ G P +H
Sbjct: 248 SLGVIXYILLCGYPPFYSNH 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEP--QISDFGLAKWLPSQWTHHSIAPIEGTF 234
G+ Y H +I HRD+K N LL P +I DFG +K S H GT
Sbjct: 128 GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 181
Query: 235 GHLAPEYFMHGIVDEK-TDVFAFGVFLLEIISGRKPVDGSHQ 275
++APE + D K DV++ GV L ++ G P + +
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 185 CQR-RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
C R +I+HRD+K N+LL + +I+DFGL+ + + + G+ + APE
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVIN 180
Query: 244 HGI-VDEKTDVFAFGVFLLEIISGRKPVD 271
+ + DV++ G+ L ++ GR P D
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 74 VGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGC 132
+G GG+A+V + GE +A+K + K + TEI + ++ H ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHICQLYHV 76
Query: 133 C-VDNGLYLIFQFSSRGSVASLF--HDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQRRI 189
N ++++ ++ G + D S V +I A Y+H +
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA----YVH---SQGY 129
Query: 190 IHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM-HGIVD 248
HRD+K N+L + ++ DFGL P + + G+ + APE +
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLG 188
Query: 249 EKTDVFAFGVFLLEIISGRKPVD 271
+ DV++ G+ L ++ G P D
Sbjct: 189 SEADVWSMGILLYVLMCGFLPFD 211
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 119/295 (40%), Gaps = 43/295 (14%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGT 117
F+ +S+ +S +G GG ++V++ + + + A+K + D++ + EI
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 118 IGHVCH--PNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNS-----PGVEWKVRHK 169
+ + ++ L + D +Y++ + G++ D+NS ++ R
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNI-----DLNSWLKKKKSIDPWERKS 131
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAP 229
+H +H Q I+H D+K +N L+ D ++ DFG+A + T
Sbjct: 132 YWKNMLEAVHTIH---QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 187
Query: 230 IEGTFGHLAPEYF-----------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLH 278
GT ++ PE + K+DV++ G L + G+ P
Sbjct: 188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------- 239
Query: 279 SWAKPILNQ-GEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ I+NQ ++ ++DP + + L C++ P R ++ E+L
Sbjct: 240 ---QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 172 VGTARGLHYLHKGCQRRIIHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIA 228
+GTA + +LH I HRD+K N+L T+ D +++DFG AK + T +++
Sbjct: 137 IGTA--IQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQ 187
Query: 229 PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP-VDGSHQSLHSWAKPILNQ 287
T ++APE D+ D+++ GV + ++ G P + Q++ K +
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 247
Query: 288 GEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
G+ + + D QL R L ++ PT R T+++ +
Sbjct: 248 GQYGFPNPEWSEVSEDAKQLIR------LLLKTDPTERLTITQFM 286
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 31/196 (15%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSS 146
Q E +AVK + + D K EI + HPN++ + L ++ +++S
Sbjct: 41 QSNELVAVKYIERGEKIDENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 97
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTAR--------GLHYLHKGCQRRIIHRDIKSSN 198
G LF + + G + + AR G+ Y H ++ HRD+K N
Sbjct: 98 GGE---LFERICNAG-------RFSEDEARFFFQQLISGVSYCHA---MQVCHRDLKLEN 144
Query: 199 ILLTADFEP--QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT-DVFA 255
LL P +I DFG +K S H GT ++APE + D K DV++
Sbjct: 145 TLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWS 201
Query: 256 FGVFLLEIISGRKPVD 271
GV L ++ G P +
Sbjct: 202 CGVTLYVMLVGAYPFE 217
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 172 VGTARGLHYLHKGCQRRIIHRDIKSSNILLTA---DFEPQISDFGLAKWLPSQWTHHSIA 228
+GTA + +LH I HRD+K N+L T+ D +++DFG AK + T +++
Sbjct: 118 IGTA--IQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQ 168
Query: 229 PIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKP 269
T ++APE D+ D+++ GV + ++ G P
Sbjct: 169 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 177 GLHYLHKGCQRRIIHRDIKSSNILLTADFEP--QISDFGLAKWLPSQWTHHSIAPIEGTF 234
G+ Y H ++ HRD+K N LL P +I DFG +K S H GT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 180
Query: 235 GHLAPEYFMHGIVDEKT-DVFAFGVFLLEIISGRKPVD 271
++APE + D K DV++ GV L ++ G P +
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 51/238 (21%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIG 116
FEEI++ +G+G + +V K D A+K K+ + K L+E+
Sbjct: 8 FEEIAV----------LGQGAFGQVVKARNALDSRYYAIK---KIRHTEEKLSTILSEVX 54
Query: 117 TIGHVCHPNVLSLLGCCVD--------------NGLYLIFQFSSRGSVASLFH--DVNSP 160
+ + H V+ ++ + L++ ++ ++ L H ++N
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ 114
Query: 161 GVE-WKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAK--- 216
E W++ +I L Y+H + IIHR++K NI + +I DFGLAK
Sbjct: 115 RDEYWRLFRQIL----EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVH 167
Query: 217 ------WLPSQ---WTHHSIAPIEGTFGHLAPEYF-MHGIVDEKTDVFAFGVFLLEII 264
L SQ + ++ GT ++A E G +EK D ++ G+ E I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSS 146
Q E +AVK + + D K EI + HPN++ + L ++ +++S
Sbjct: 42 QANELVAVKYIERGEKIDENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTAR--------GLHYLHKGCQRRIIHRDIKSSN 198
G LF + + G + + AR G+ Y H ++ HRD+K N
Sbjct: 99 GGE---LFERICNAG-------RFSEDEARFFFQQLISGVSYAHA---MQVAHRDLKLEN 145
Query: 199 ILLTADFEP--QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT-DVFA 255
LL P +I+DFG +K + H GT ++APE + D K DV++
Sbjct: 146 TLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWS 202
Query: 256 FGVFLLEIISGRKPVD 271
GV L ++ G P +
Sbjct: 203 CGVTLYVMLVGAYPFE 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 118/294 (40%), Gaps = 43/294 (14%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTI 118
E IS+ +S +G GG ++V++ + + + A+K + D++ + EI +
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 119 GHVCH--PNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNS-----PGVEWKVRHKI 170
+ ++ L + D +Y++ + G++ D+NS ++ R
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNI-----DLNSWLKKKKSIDPWERKSY 160
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
+H +H Q I+H D+K +N L+ D ++ DFG+A + T
Sbjct: 161 WKNMLEAVHTIH---QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 231 EGTFGHLAPEYF-----------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHS 279
GT ++ PE + K+DV++ G L + G+ P
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------- 267
Query: 280 WAKPILNQ-GEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ I+NQ ++ ++DP + + L C++ P R ++ E+L
Sbjct: 268 --QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 121/295 (41%), Gaps = 45/295 (15%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGT 117
E IS+ +S +G GG ++V++ VL + ++I A+K + D++ + EI
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 107
Query: 118 IGHVCH--PNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNS-----PGVEWKVRHK 169
+ + ++ L + D +Y++ + G++ D+NS ++ R
Sbjct: 108 LNKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNI-----DLNSWLKKKKSIDPWERKS 159
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAP 229
+H +H Q I+H D+K +N L+ D ++ DFG+A + T
Sbjct: 160 YWKNMLEAVHTIH---QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 230 IEGTFGHLAPEYF-----------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLH 278
GT ++ PE + K+DV++ G L + G+ P
Sbjct: 216 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------- 267
Query: 279 SWAKPILNQ-GEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ I+NQ ++ ++DP + + L C++ P R ++ E+L
Sbjct: 268 ---QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 13/169 (7%)
Query: 109 KEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+E E+ + V H NV++L + + LI + S G + S E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT- 118
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWT 223
G++YLH ++I H D+K NI+L P ++ DFGLA +
Sbjct: 119 -SFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+I GT +APE + + + D+++ GV ++SG P G
Sbjct: 175 FKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 118/294 (40%), Gaps = 43/294 (14%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTI 118
E IS+ +S +G GG ++V++ + + + A+K + D++ + EI +
Sbjct: 2 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 61
Query: 119 GHVCH--PNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNS-----PGVEWKVRHKI 170
+ ++ L + D +Y++ + G++ D+NS ++ R
Sbjct: 62 NKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNI-----DLNSWLKKKKSIDPWERKSY 113
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
+H +H Q I+H D+K +N L+ D ++ DFG+A + T
Sbjct: 114 WKNMLEAVHTIH---QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 231 EGTFGHLAPEYF-----------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHS 279
GT ++ PE + K+DV++ G L + G+ P
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------- 220
Query: 280 WAKPILNQ-GEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ I+NQ ++ ++DP + + L C++ P R ++ E+L
Sbjct: 221 --QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 13/169 (7%)
Query: 109 KEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+E E+ + V H NV++L + + LI + S G + S E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT- 118
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWT 223
G++YLH ++I H D+K NI+L P ++ DFGLA +
Sbjct: 119 -SFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+I GT +APE + + + D+++ GV ++SG P G
Sbjct: 175 FKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 18/209 (8%)
Query: 74 VGRGGYAEVYK-----GVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLS 128
+G G +A V K L+ + KR ++ +E E+ + V H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 129 LLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTARGLHYLHKGCQR 187
L + + LI + S G + S E G++YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT--SFIKQILDGVNYLH---TK 134
Query: 188 RIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
+I H D+K NI+L P ++ DFGLA + +I GT +APE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVAPEIVN 191
Query: 244 HGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+ + + D+++ GV ++SG P G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 108
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 222
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 223 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 13/169 (7%)
Query: 109 KEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+E E+ + V H NV++L + + LI + S G + S E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT- 118
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWT 223
G++YLH ++I H D+K NI+L P ++ DFGLA +
Sbjct: 119 -SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+I GT +APE + + + D+++ GV ++SG P G
Sbjct: 175 FKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 93
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 154 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 207
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 208 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 86
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 200
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 201 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 13/169 (7%)
Query: 109 KEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
+E E+ + V H NV++L + + LI + S G + S E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEP----QISDFGLAKWLPSQWT 223
+ G++YLH ++I H D+K NI+L P ++ DFGLA +
Sbjct: 120 FIKQI--LDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 224 HHSIAPIEGTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
+I GT +APE + + + D+++ GV ++SG P G
Sbjct: 175 FKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 82
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 143 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 196
Query: 237 LAPEYFMHGIVD--EKTDVFAFGVFLLEIISGR 267
APE + G D DV++ G L E++ G+
Sbjct: 197 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 118/295 (40%), Gaps = 43/295 (14%)
Query: 58 FEEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGT 117
F+ +S+ +S +G GG ++V++ + + + A+K + D++ + EI
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 118 IGHVCH--PNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNS-----PGVEWKVRHK 169
+ + ++ L + D +Y++ + G++ D+NS ++ R
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNI-----DLNSWLKKKKSIDPWERKS 131
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAP 229
+H +H Q I+H D+K +N L+ D ++ DFG+A +
Sbjct: 132 YWKNMLEAVHTIH---QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDS 187
Query: 230 IEGTFGHLAPEYF-----------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLH 278
GT ++ PE + K+DV++ G L + G+ P
Sbjct: 188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------- 239
Query: 279 SWAKPILNQ-GEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ I+NQ ++ ++DP + + L C++ P R ++ E+L
Sbjct: 240 ---QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 86
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 200
Query: 237 LAPEYFMHGIVD--EKTDVFAFGVFLLEIISGR 267
APE + G D DV++ G L E++ G+
Sbjct: 201 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 74
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 188
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 74
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 188
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 118/294 (40%), Gaps = 43/294 (14%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTI 118
E IS+ +S +G GG ++V++ + + + A+K + D++ + EI +
Sbjct: 5 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 64
Query: 119 GHVCH--PNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNS-----PGVEWKVRHKI 170
+ ++ L + D +Y++ + G++ D+NS ++ R
Sbjct: 65 NKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNI-----DLNSWLKKKKSIDPWERKSY 116
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
+H +H Q I+H D+K +N L+ D ++ DFG+A + T
Sbjct: 117 WKNMLEAVHTIH---QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 231 EGTFGHLAPEYF-----------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHS 279
GT ++ PE + K+DV++ G L + G+ P
Sbjct: 173 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------- 223
Query: 280 WAKPILNQ-GEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ I+NQ ++ ++DP + + L C++ P R ++ E+L
Sbjct: 224 --QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 185 CQR-RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
C R +I+HRD+K N+LL +I+DFGL+ + + + G+ + APE
Sbjct: 129 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVIS 185
Query: 244 HGI-VDEKTDVFAFGVFLLEIISGRKPVD 271
+ + DV++ GV L ++ R P D
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 74
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 188
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 75
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 136 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 189
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 190 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 185 CQR-RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
C R +I+HRD+K N+LL +I+DFGL+ + + + G+ + APE
Sbjct: 128 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVIS 184
Query: 244 HGI-VDEKTDVFAFGVFLLEIISGRKPVD 271
+ + DV++ GV L ++ R P D
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 78
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 139 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 192
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 193 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 118/294 (40%), Gaps = 43/294 (14%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTI 118
E IS+ +S +G GG ++V++ + + + A+K + D++ + EI +
Sbjct: 1 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 60
Query: 119 GHVCH--PNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNS-----PGVEWKVRHKI 170
+ ++ L + D +Y++ + G++ D+NS ++ R
Sbjct: 61 NKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNI-----DLNSWLKKKKSIDPWERKSY 112
Query: 171 AVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPI 230
+H +H Q I+H D+K +N L+ D ++ DFG+A + T
Sbjct: 113 WKNMLEAVHTIH---QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 231 EGTFGHLAPEYF-----------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHS 279
GT ++ PE + K+DV++ G L + G+ P
Sbjct: 169 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------- 219
Query: 280 WAKPILNQ-GEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ I+NQ ++ ++DP + + L C++ P R ++ E+L
Sbjct: 220 --QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 185 CQR-RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
C R +I+HRD+K N+LL +I+DFGL+ + + + G+ + APE
Sbjct: 123 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVIS 179
Query: 244 HGI-VDEKTDVFAFGVFLLEIISGRKPVD 271
+ + DV++ GV L ++ R P D
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 185 CQR-RIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFM 243
C R +I+HRD+K N+LL +I+DFGL+ + + + G+ + APE
Sbjct: 119 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVIS 175
Query: 244 HGI-VDEKTDVFAFGVFLLEIISGRKPVD 271
+ + DV++ GV L ++ R P D
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 87
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 148 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 201
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 202 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 102
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 163 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 216
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 217 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 108
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 222
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 223 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 79
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 140 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 193
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 194 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 110
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 171 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 224
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 225 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 74
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 188
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 112
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 173 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 226
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 227 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 67 AFSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPN 125
+++ ++G G + VY+ L D GE +A+K KV+ D R + E+ + + H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNR---ELQIMRKLDHCN 153
Query: 126 VLSLLGCCVDNG-------LYLIFQFSSRGSVASLFHDVNSPGVEWKVRHKIAVGTA-RG 177
++ L +G L L+ + H + + K+ + R
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 178 LHYLHKGCQRRIIHRDIKSSNILLTADFEP-QISDFGLAKWLPSQWTHHSIAPIEGTFGH 236
L Y+H I HRDIK N+LL D ++ DFG AK L +++ I + +
Sbjct: 214 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 267
Query: 237 LAPEYFMHGIVDEKT--DVFAFGVFLLEIISGR 267
APE + G D + DV++ G L E++ G+
Sbjct: 268 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 31/196 (15%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSS 146
Q E +AVK + + D K EI + HPN++ + L ++ +++S
Sbjct: 42 QSNELVAVKYIERGEKIDENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTAR--------GLHYLHKGCQRRIIHRDIKSSN 198
G LF + + G + + AR G+ Y H ++ HRD+K N
Sbjct: 99 GGE---LFERICNAG-------RFSEDEARFFFQQLISGVSYCHA---MQVCHRDLKLEN 145
Query: 199 ILLTADFEP--QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT-DVFA 255
LL P +I FG +K S H GT ++APE + D K DV++
Sbjct: 146 TLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWS 202
Query: 256 FGVFLLEIISGRKPVD 271
GV L ++ G P +
Sbjct: 203 CGVTLYVMLVGAYPFE 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 31/234 (13%)
Query: 68 FSSENLVGRGGYAEVYKGVLQD-GEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNV 126
F E + G+G + V G + G +A+K KV+ D R L + + + HPN+
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIK---KVIQDPRFRNRELQIMQDLAVLHHPNI 81
Query: 127 LSL------LGCCVDNGLYL--IFQFSS----RGSVASLFHDVNSPGVEWKVRHKIAVGT 174
+ L LG +YL + ++ R V P + KV
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV---FLFQL 138
Query: 175 ARGLHYLHKGCQRRIIHRDIKSSNILLT-ADFEPQISDFGLAKWL-PSQWTHHSIAPIEG 232
R + LH + HRDIK N+L+ AD ++ DFG AK L PS+ ++A I
Sbjct: 139 IRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE---PNVAYICS 194
Query: 233 TFGHLAPEY-FMHGIVDEKTDVFAFGVFLLEIISGRKPV---DGSHQSLHSWAK 282
+ + APE F + D+++ G E++ G +P+ D S LH +
Sbjct: 195 RY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDNSAGQLHEIVR 246
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 120/295 (40%), Gaps = 45/295 (15%)
Query: 59 EEISIATNAFSSENLVGRGGYAEVYKGVLQDGEEI-AVKRLTKVVTDDRKEKEFLTEIGT 117
E IS+ +S +G GG ++V++ VL + ++I A+K + D++ + EI
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 107
Query: 118 IGHVCH--PNVLSLLGCCV-DNGLYLIFQFSSRGSVASLFHDVNS-----PGVEWKVRHK 169
+ + ++ L + D +Y++ + G++ D+NS ++ R
Sbjct: 108 LNKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNI-----DLNSWLKKKKSIDPWERKS 159
Query: 170 IAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKWLPSQWTHHSIAP 229
+H +H Q I+H D+K +N L+ D ++ DFG+A + T
Sbjct: 160 YWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 230 IEGTFGHLAPEYF-----------MHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLH 278
G ++ PE + K+DV++ G L + G+ P
Sbjct: 216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------- 267
Query: 279 SWAKPILNQ-GEIEKLVDPRLQGAYDVTQLNRLAFAASLCIRASPTWRPTMSEVL 332
+ I+NQ ++ ++DP + + L C++ P R ++ E+L
Sbjct: 268 ---QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 31/194 (15%)
Query: 88 QDGEEIAVKRLTKVVTDDRKEKEFLTEIGTIGHVCHPNVLSLLGCCVD-NGLYLIFQFSS 146
Q E +AVK + + D K EI + HPN++ + L ++ +++S
Sbjct: 42 QSNELVAVKYIERGEKIDENVKR---EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 147 RGSVASLFHDVNSPGVEWKVRHKIAVGTAR--------GLHYLHKGCQRRIIHRDIKSSN 198
G LF + + G + + AR G+ Y H ++ HRD+K N
Sbjct: 99 GGE---LFERICNAG-------RFSEDEARFFFQQLISGVSYCHA---MQVCHRDLKLEN 145
Query: 199 ILLTADFEP--QISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYFMHGIVDEKT-DVFA 255
LL P +I FG +K S H GT ++APE + D K DV++
Sbjct: 146 TLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWS 202
Query: 256 FGVFLLEIISGRKP 269
GV L ++ G P
Sbjct: 203 CGVTLYVMLVGAYP 216
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 158 NSPGVEWKVRHKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQISDFGLAKW 217
N G+ KI +GL YLH C RIIH DIK NILL+ + E I
Sbjct: 139 NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVN-EQYIRRLAAEA- 194
Query: 218 LPSQWTHHSIAPIEGTFGHLAP 239
++W P G+ AP
Sbjct: 195 --TEWQRSGAPPPSGSAVSTAP 214
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 86/233 (36%), Gaps = 50/233 (21%)
Query: 66 NAFSSENLVGRGGYAEVYKGV-LQDGEEIAVKRLTKVVTDDRKEKEFLTEIGTI----GH 120
N F +G G + E+Y G +Q EE+A+K L V T K + L E G
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKT---KHPQLLYESKIYRILQGG 62
Query: 121 VCHPNV-------------LSLLGCCVDNGLYLIFQFSSRGSVASLFHDVNSPGVEWKVR 167
PNV + LLG +++ +F F SR + K
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDLLGPSLED----LFNFCSRK-------------LSLKTV 105
Query: 168 HKIAVGTARGLHYLHKGCQRRIIHRDIKSSNILLTADFEPQ---ISDFGLAKWLPSQWTH 224
+A + ++H + +HRDIK N L+ I DFGLAK TH
Sbjct: 106 LMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162
Query: 225 HSIAPIE-----GTFGHLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDG 272
I E GT + + + + D+ + G L+ + G P G
Sbjct: 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,721,258
Number of Sequences: 62578
Number of extensions: 476181
Number of successful extensions: 3353
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 244
Number of HSP's that attempted gapping in prelim test: 1156
Number of HSP's gapped (non-prelim): 1164
length of query: 386
length of database: 14,973,337
effective HSP length: 101
effective length of query: 285
effective length of database: 8,652,959
effective search space: 2466093315
effective search space used: 2466093315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)